Cygnus olor isolate bCygOlo1 chromosome 12, bCygOlo1.pri.v2, whole genome shotgun sequence.
type: Entry
definition: Cygnus olor isolate bCygOlo1 chromosome 12, bCygOlo1.pri.v2, whole genome shotgun sequence.
sequence version: NC_049180.1
sequence date: 2021-04-08
sequence: sequence
division: CON
label: NC_049180.1
type: RefSeq
SIO_000068: refseq
dblink: PRJNA642912
dblink: SAMN12621369
keyword: WGS
keyword: RefSeq
source: Cygnus olor (mute swan)
organism: Cygnus olor
taxonomy: Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Galloanserae; Anseriformes; Anatidae; Anserinae; Cygnus.
comment: REFSEQ INFORMATION: The reference sequence is identical to\nCM020076.2.\nAssembly name: bCygOlo1.pri.v2\nThe genomic sequence for this RefSeq record is from the\nwhole-genome assembly released by the Vertebrate Genomes Project on\n2021/03/31. The original whole-genome shotgun project has the\naccession WNMI00000000.2.\n\n##Genome-Assembly-Data-START##\nAssembly Provider :: Vertebrate Genomes Project\nAssembly Date :: 30-NOV-2020\nAssembly Method :: FALCON v. 2018.31.08-03.06; FALCON-Unzip\n v. 6.0.0.47841; purge_haplotigs v. 1.0.3+\n 1.Nov.2018; scaff10x v. 4.1.0; Bionano\n solve v. 3.2.1_04122018; Salsa HiC v.\n 2.2; Arrow smrtanalysis Pacbio polishing\n & gap filling v. 6.0.0.47841; longranger\n align v. 2.2.2; freebayes Illumina\n polishing v. 1.3.1; gEVAL manual curation\n v. 2020-11-30; VGP assembly pipeline\n individual v. 1.5\nAssembly Name :: bCygOlo1.pri.v2\nDiploid :: Principal pseudohaplotype\nGenome Representation :: Full\nExpected Final Version :: No\nGenome Coverage :: 60.23x\nSequencing Technology :: PacBio Sequel 1 CLR; Illumina NovaSeq;\n Arima Genomics Hi-C; Bionano Genomics DLS\n##Genome-Assembly-Data-END##\n\n##Genome-Annotation-Data-START##\nAnnotation Provider :: NCBI\nAnnotation Status :: Full annotation\nAnnotation Name :: Cygnus olor Annotation Release 100\nAnnotation Version :: 100\nAnnotation Pipeline :: NCBI eukaryotic genome annotation\n pipeline\nAnnotation Software Version :: 8.6\nAnnotation Method :: Best-placed RefSeq; Gnomon\nFeatures Annotated :: Gene; mRNA; CDS; ncRNA\n##Genome-Annotation-Data-END##

sequence
subclass of: SO_0000340
sequence length: 21829091
topology: linear
so has quality: SO_0000987
location: 1..21829091
location: region:1-21829091:1
RO_0002162: 8869

NC_049180
type: RefSeq
SIO_000068: refseq

PRJNA642912
type: BioProject
SIO_000068: bioproject

SAMN12621369
type: BioSample
SIO_000068: biosample

position:1:1
position: 1
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:21829091:1
position: 21829091
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

feature:1-21829091:1:source
so part of: sequence
organism: Cygnus olor
mol type: genomic DNA
isolate: bCygOlo1
chromosome: 12
sex: male
tissue type: muscle
dev stage: adult
country: Germany: Mainau
lat lon: 50.149850 N 11.063270 E
collection date: 2015-07-01
collected by: Robert Kraus

8869
type: Taxonomy
SIO_000068: taxonomy

TMEM231
type: Gene
subclass of: SO_0000704
RO_0002162: 8869
gene: TMEM231
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(3917..8992)
location: region:3917-8992:-1
so has part: feature:3917-8992:-1:exon
subclass of: SO_0000010

121076598
type: Gene
SIO_000068: ncbigene

position:3917:-1
position: 3917
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:8992:-1
position: 8992
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3917-8992:-1:exon

TMEM231
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8869
gene: TMEM231
product: transmembrane protein 231, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 long SRA reads, 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 12 samples with support for all annotated introns
transcript id: XM_040571066.1
SIO_010081: TMEM231
subclass of: SO_0000673
so part of: TMEM231
location: complement(join(3917..4359,5252..5357,5491..5572,6153..6296,7561..7689,8569..8738,8810..8992))
location: region:3917-8992:-1
so has part: feature:8810-8992:-1:exon
so has part: feature:8569-8738:-1:exon
so has part: feature:7561-7689:-1:exon
so has part: feature:6153-6296:-1:exon
so has part: feature:5491-5572:-1:exon
so has part: feature:5252-5357:-1:exon
so has part: feature:3917-4359:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:8810-8992:-1:exon

position:8810:-1
position: 8810
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:8569-8738:-1:exon

position:8569:-1
position: 8569
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:8738:-1
position: 8738
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:7561-7689:-1:exon

position:7561:-1
position: 7561
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7689:-1
position: 7689
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:6153-6296:-1:exon

position:6153:-1
position: 6153
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6296:-1
position: 6296
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:5491-5572:-1:exon

position:5491:-1
position: 5491
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5572:-1
position: 5572
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:5252-5357:-1:exon

position:5252:-1
position: 5252
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5357:-1
position: 5357
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:3917-4359:-1:exon

position:4359:-1
position: 4359
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

TMEM231
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8869
gene: TMEM231
product: transmembrane protein 231, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 long SRA reads, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 12 samples with support for all annotated introns
transcript id: XM_040571065.1
SIO_010081: TMEM231
subclass of: SO_0000673
so part of: TMEM231
location: complement(join(3917..4359,5252..5357,5491..5572,6153..6296,7561..7689,8431..8738,8810..8992))
location: region:3917-8992:-1
so has part: feature:8810-8992:-1:exon
so has part: feature:8431-8738:-1:exon
so has part: feature:7561-7689:-1:exon
so has part: feature:6153-6296:-1:exon
so has part: feature:5491-5572:-1:exon
so has part: feature:5252-5357:-1:exon
so has part: feature:3917-4359:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:8810-8992:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:8431-8738:-1:exon

position:8431:-1
position: 8431
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:7561-7689:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:6153-6296:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:5491-5572:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:5252-5357:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3917-4359:-1:exon

TMEM231
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8869
gene: TMEM231
product: transmembrane protein 231, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 long SRA reads, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 12 samples with support for all annotated introns
transcript id: XM_040571067.1
SIO_010081: TMEM231
subclass of: SO_0000673
so part of: TMEM231
location: complement(join(3917..4358,5252..5357,5491..5572,6153..6296,7561..7736,8569..8802))
location: region:3917-8802:-1
so has part: feature:8569-8802:-1:exon
so has part: feature:7561-7736:-1:exon
so has part: feature:6153-6296:-1:exon
so has part: feature:5491-5572:-1:exon
so has part: feature:5252-5357:-1:exon
so has part: feature:3917-4358:-1:exon

position:8802:-1
position: 8802
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:8569-8802:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:7561-7736:-1:exon

position:7736:-1
position: 7736
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:6153-6296:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:5491-5572:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:5252-5357:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3917-4358:-1:exon

position:4358:-1
position: 4358
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

TMEM231
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8869
gene: TMEM231
product: transmembrane protein 231, transcript variant X5
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 long SRA reads, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 12 samples with support for all annotated introns
transcript id: XM_040571069.1
SIO_010081: TMEM231
subclass of: SO_0000673
so part of: TMEM231
location: complement(join(3917..4358,5252..5357,5491..5572,6153..6296,7561..7689,8431..8763))
location: region:3917-8763:-1
so has part: feature:8431-8763:-1:exon
so has part: feature:7561-7689:-1:exon
so has part: feature:6153-6296:-1:exon
so has part: feature:5491-5572:-1:exon
so has part: feature:5252-5357:-1:exon
so has part: feature:3917-4358:-1:exon

position:8763:-1
position: 8763
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:8431-8763:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:7561-7689:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:6153-6296:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:5491-5572:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:5252-5357:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3917-4358:-1:exon

TMEM231
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8869
gene: TMEM231
product: transmembrane protein 231, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 long SRA reads, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 12 samples with support for all annotated introns
transcript id: XM_040571068.1
SIO_010081: TMEM231
subclass of: SO_0000673
so part of: TMEM231
location: complement(join(3917..4358,5252..5357,5491..5572,6153..6296,7561..7689,8569..8738))
location: region:3917-8738:-1
so has part: feature:8569-8738:-1:exon
so has part: feature:7561-7689:-1:exon
so has part: feature:6153-6296:-1:exon
so has part: feature:5491-5572:-1:exon
so has part: feature:5252-5357:-1:exon
so has part: feature:3917-4358:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:8569-8738:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:7561-7689:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:6153-6296:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:5491-5572:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:5252-5357:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3917-4358:-1:exon

TMEM231
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8869
gene: TMEM231
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: transmembrane protein 231 isoform X3
translation: MDQLHFKLELPLQPTEHVVGVQLILIFSYQLYRMSTLVMQSMAFLQFFSPVPGSQLYMNGDLKLNQRQLLNHCGLDTRYNVSVVNGTSPFAADYDLTNIIAAYRDRNVTTVFSDPNPVWMTGRAADTPFIINATIRYPEEVILISQDFGKLLNLPGSSMSAFSLSFSGSLVGLKCLCSRIRCSLQLQYHQFCHCLQCCPTSSISPEEMPGKTLKKPSSKISTCFYYLYTLFTLKDRTWYVCSEYVPFLLYVSMTLCNFSFLKCSFMHFCGNIALGLKCLILDS
SIO_010081: TMEM231
subclass of: SO_0000673
so part of: TMEM231
location: complement(join(3935..4358,5252..5357,5491..5572,6153..6296,7561..7656))
location: region:3935-7656:-1
so has part: feature:7561-7656:-1:exon
so has part: feature:6153-6296:-1:exon
so has part: feature:5491-5572:-1:exon
so has part: feature:5252-5357:-1:exon
so has part: feature:3935-4358:-1:exon

XP_040427001.1
type: Protein
SIO_000068: ncbiprotein

position:3935:-1
position: 3935
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7656:-1
position: 7656
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7561-7656:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:6153-6296:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:5491-5572:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:5252-5357:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3935-4358:-1:exon

TMEM231
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8869
gene: TMEM231
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: transmembrane protein 231 isoform X3
translation: MDQLHFKLELPLQPTEHVVGVQLILIFSYQLYRMSTLVMQSMAFLQFFSPVPGSQLYMNGDLKLNQRQLLNHCGLDTRYNVSVVNGTSPFAADYDLTNIIAAYRDRNVTTVFSDPNPVWMTGRAADTPFIINATIRYPEEVILISQDFGKLLNLPGSSMSAFSLSFSGSLVGLKCLCSRIRCSLQLQYHQFCHCLQCCPTSSISPEEMPGKTLKKPSSKISTCFYYLYTLFTLKDRTWYVCSEYVPFLLYVSMTLCNFSFLKCSFMHFCGNIALGLKCLILDS
SIO_010081: TMEM231
subclass of: SO_0000673
so part of: TMEM231
location: complement(join(3935..4358,5252..5357,5491..5572,6153..6296,7561..7656))
location: region:3935-7656:-1
so has part: feature:7561-7656:-1:exon
so has part: feature:6153-6296:-1:exon
so has part: feature:5491-5572:-1:exon
so has part: feature:5252-5357:-1:exon
so has part: feature:3935-4358:-1:exon

XP_040427002.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:7561-7656:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:6153-6296:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:5491-5572:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:5252-5357:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3935-4358:-1:exon

TMEM231
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8869
gene: TMEM231
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: transmembrane protein 231 isoform X3
translation: MDQLHFKLELPLQPTEHVVGVQLILIFSYQLYRMSTLVMQSMAFLQFFSPVPGSQLYMNGDLKLNQRQLLNHCGLDTRYNVSVVNGTSPFAADYDLTNIIAAYRDRNVTTVFSDPNPVWMTGRAADTPFIINATIRYPEEVILISQDFGKLLNLPGSSMSAFSLSFSGSLVGLKCLCSRIRCSLQLQYHQFCHCLQCCPTSSISPEEMPGKTLKKPSSKISTCFYYLYTLFTLKDRTWYVCSEYVPFLLYVSMTLCNFSFLKCSFMHFCGNIALGLKCLILDS
SIO_010081: TMEM231
subclass of: SO_0000673
so part of: TMEM231
location: complement(join(3935..4358,5252..5357,5491..5572,6153..6296,7561..7656))
location: region:3935-7656:-1
so has part: feature:7561-7656:-1:exon
so has part: feature:6153-6296:-1:exon
so has part: feature:5491-5572:-1:exon
so has part: feature:5252-5357:-1:exon
so has part: feature:3935-4358:-1:exon

XP_040427003.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:7561-7656:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:6153-6296:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:5491-5572:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:5252-5357:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3935-4358:-1:exon

TMEM231
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8869
gene: TMEM231
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: transmembrane protein 231 isoform X2
translation: MAGVELFSHPALHTRYRAGLCSAAALALLLIAVLTYVPPLLVAYRSHGFWLKQSAYREQPTVRFRYEVLFVATTGPGPGSFLAWSTFPAFNRLQEDRLRVPLLSTREEDKNQDGKMDQLHFKLELPLQPTEHVVGVQLILIFSYQLYRMSTLVMQSMAFLQFFSPVPGSQLYMNGDLKLNQRQLLNHCGLDTRYNVSVVNGTSPFAADYDLTNIIAAYRDRNVTTVFSDPNPVWMTGRAADTPFIINATIRYPEEVILYQPGFWEIIKFAWIQYVSILLIFLWVFGWIKMFVFQNQVFTTTPISPVLPLSPVLSYKQHQS
SIO_010081: TMEM231
subclass of: SO_0000673
so part of: TMEM231
location: complement(join(4170..4359,5252..5357,5491..5572,6153..6296,7561..7689,8569..8738,8810..8951))
location: region:4170-8951:-1
so has part: feature:8810-8951:-1:exon
so has part: feature:8569-8738:-1:exon
so has part: feature:7561-7689:-1:exon
so has part: feature:6153-6296:-1:exon
so has part: feature:5491-5572:-1:exon
so has part: feature:5252-5357:-1:exon
so has part: feature:4170-4359:-1:exon

XP_040427000.1
type: Protein
SIO_000068: ncbiprotein

position:4170:-1
position: 4170
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:8951:-1
position: 8951
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:8810-8951:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:8569-8738:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:7561-7689:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:6153-6296:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:5491-5572:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:5252-5357:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:4170-4359:-1:exon

TMEM231
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8869
gene: TMEM231
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: transmembrane protein 231 isoform X1
translation: MAGVELFSHPALHTRYRAGLCSAAALALLLIAVLTYVPPLLVAYRSHGFWLKQSAYREQPTVRFRYEVLFVATTGPGPGSFLAWSTFPAFNRLQEDRLRVPLLSVGVPGGAGGDAGRVGGARERAAGCAPLPSRSSSLVLAPHGTTLSGQTREEDKNQDGKMDQLHFKLELPLQPTEHVVGVQLILIFSYQLYRMSTLVMQSMAFLQFFSPVPGSQLYMNGDLKLNQRQLLNHCGLDTRYNVSVVNGTSPFAADYDLTNIIAAYRDRNVTTVFSDPNPVWMTGRAADTPFIINATIRYPEEVILYQPGFWEIIKFAWIQYVSILLIFLWVFGWIKMFVFQNQVFTTTPISPVLPLSPVLSYKQHQS
SIO_010081: TMEM231
subclass of: SO_0000673
so part of: TMEM231
location: complement(join(4170..4359,5252..5357,5491..5572,6153..6296,7561..7689,8431..8738,8810..8951))
location: region:4170-8951:-1
so has part: feature:8810-8951:-1:exon
so has part: feature:8431-8738:-1:exon
so has part: feature:7561-7689:-1:exon
so has part: feature:6153-6296:-1:exon
so has part: feature:5491-5572:-1:exon
so has part: feature:5252-5357:-1:exon
so has part: feature:4170-4359:-1:exon

XP_040426999.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:8810-8951:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:8431-8738:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:7561-7689:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:6153-6296:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:5491-5572:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:5252-5357:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:4170-4359:-1:exon

GABARAPL2
type: Gene
subclass of: SO_0000704
RO_0002162: 8869
gene: GABARAPL2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 9307..17990
location: region:9307-17990:1
so has part: feature:9307-17990:1:exon
subclass of: SO_0000010

121076600
type: Gene
SIO_000068: ncbigene

position:9307:1
position: 9307
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:17990:1
position: 17990
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:9307-17990:1:exon

GABARAPL2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8869
gene: GABARAPL2
product: GABA type A receptor associated protein like 2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 62 long SRA reads, 20 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 12 samples with support for all annotated introns
transcript id: XM_040571071.1
SIO_010081: GABARAPL2
subclass of: SO_0000673
so part of: GABARAPL2
location: join(9307..9483,9821..9876,15247..15419,17434..17990)
location: region:9307-17990:1
so has part: feature:9307-9483:1:exon
so has part: feature:9821-9876:1:exon
so has part: feature:15247-15419:1:exon
so has part: feature:17434-17990:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:9307-9483:1:exon

position:9483:1
position: 9483
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:9821-9876:1:exon

position:9821:1
position: 9821
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:9876:1
position: 9876
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:15247-15419:1:exon

position:15247:1
position: 15247
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:15419:1
position: 15419
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:17434-17990:1:exon

position:17434:1
position: 17434
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

GABARAPL2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8869
gene: GABARAPL2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: gamma-aminobutyric acid receptor-associated protein-like 2
translation: MKWMFKEDHALEHRCVESAKIRAKYPDRVPVIVEKVSGSQIVDIDKRKYLVPSDITVAQFMWIIRKRIQLPSEKAIFLFVDKTVPQSSLTMGQLYEKEKDEDGFLYVAYSGENTFGF
SIO_010081: GABARAPL2
subclass of: SO_0000673
so part of: GABARAPL2
location: join(9450..9483,9821..9876,15247..15419,17434..17524)
location: region:9450-17524:1
so has part: feature:9450-9483:1:exon
so has part: feature:9821-9876:1:exon
so has part: feature:15247-15419:1:exon
so has part: feature:17434-17524:1:exon

XP_040427005.1
type: Protein
SIO_000068: ncbiprotein

position:9450:1
position: 9450
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:17524:1
position: 17524
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:9450-9483:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:9821-9876:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:15247-15419:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:17434-17524:1:exon

ADAT1
type: Gene
subclass of: SO_0000704
RO_0002162: 8869
gene: ADAT1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(21719..44000)
location: region:21719-44000:-1
so has part: feature:21719-44000:-1:exon
subclass of: SO_0000010

121076596
type: Gene
SIO_000068: ncbigene

position:21719:-1
position: 21719
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:44000:-1
position: 44000
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:21719-44000:-1:exon

ADAT1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8869
gene: ADAT1
product: adenosine deaminase tRNA specific 1, transcript variant X6
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 51 long SRA reads, 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 12 samples with support for all annotated introns
transcript id: XM_040571062.1
SIO_010081: ADAT1
subclass of: SO_0000673
so part of: ADAT1
location: complement(join(21719..24167,31181..31267,32936..33035,34741..34886,37278..37893,39259..39389,40159..40213,42496..42564,43320..43511,43731..44000))
location: region:21719-44000:-1
so has part: feature:43731-44000:-1:exon
so has part: feature:43320-43511:-1:exon
so has part: feature:42496-42564:-1:exon
so has part: feature:40159-40213:-1:exon
so has part: feature:39259-39389:-1:exon
so has part: feature:37278-37893:-1:exon
so has part: feature:34741-34886:-1:exon
so has part: feature:32936-33035:-1:exon
so has part: feature:31181-31267:-1:exon
so has part: feature:21719-24167:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:43731-44000:-1:exon

position:43731:-1
position: 43731
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:43320-43511:-1:exon

position:43320:-1
position: 43320
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:43511:-1
position: 43511
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:42496-42564:-1:exon

position:42496:-1
position: 42496
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:42564:-1
position: 42564
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:40159-40213:-1:exon

position:40159:-1
position: 40159
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:40213:-1
position: 40213
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:39259-39389:-1:exon

position:39259:-1
position: 39259
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:39389:-1
position: 39389
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:37278-37893:-1:exon

position:37278:-1
position: 37278
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:37893:-1
position: 37893
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:34741-34886:-1:exon

position:34741:-1
position: 34741
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:34886:-1
position: 34886
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:32936-33035:-1:exon

position:32936:-1
position: 32936
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:33035:-1
position: 33035
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:31181-31267:-1:exon

position:31181:-1
position: 31181
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:31267:-1
position: 31267
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:21719-24167:-1:exon

position:24167:-1
position: 24167
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

ADAT1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8869
gene: ADAT1
product: adenosine deaminase tRNA specific 1, transcript variant X5
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 29 long SRA reads, 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 12 samples with support for all annotated introns
transcript id: XM_040571061.1
SIO_010081: ADAT1
subclass of: SO_0000673
so part of: ADAT1
location: complement(join(21719..24167,31181..31267,32936..33035,34741..34886,37278..37893,39259..39389,40159..40213,42496..42564,43731..43999))
location: region:21719-43999:-1
so has part: feature:43731-43999:-1:exon
so has part: feature:42496-42564:-1:exon
so has part: feature:40159-40213:-1:exon
so has part: feature:39259-39389:-1:exon
so has part: feature:37278-37893:-1:exon
so has part: feature:34741-34886:-1:exon
so has part: feature:32936-33035:-1:exon
so has part: feature:31181-31267:-1:exon
so has part: feature:21719-24167:-1:exon

position:43999:-1
position: 43999
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:43731-43999:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:42496-42564:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:40159-40213:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:39259-39389:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:37278-37893:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:34741-34886:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:32936-33035:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:31181-31267:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:21719-24167:-1:exon

ADAT1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8869
gene: ADAT1
product: adenosine deaminase tRNA specific 1, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 9 long SRA reads, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 11 samples with support for all annotated introns
transcript id: XM_040571059.1
SIO_010081: ADAT1
subclass of: SO_0000673
so part of: ADAT1
location: complement(join(21719..24167,32936..33035,34741..34886,37278..37893,39259..39389,40159..40213,42496..42564,43320..43511,43731..43999))
location: region:21719-43999:-1
so has part: feature:43731-43999:-1:exon
so has part: feature:43320-43511:-1:exon
so has part: feature:42496-42564:-1:exon
so has part: feature:40159-40213:-1:exon
so has part: feature:39259-39389:-1:exon
so has part: feature:37278-37893:-1:exon
so has part: feature:34741-34886:-1:exon
so has part: feature:32936-33035:-1:exon
so has part: feature:21719-24167:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:43731-43999:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:43320-43511:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:42496-42564:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:40159-40213:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:39259-39389:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:37278-37893:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:34741-34886:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:32936-33035:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:21719-24167:-1:exon

ADAT1
type: Miscellaneous RNA
subclass of: SO_0000673
RO_0002162: 8869
gene: ADAT1
product: adenosine deaminase tRNA specific 1, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 20 long SRA reads, 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 10 samples with support for all annotated introns
transcript id: XR_005823592.1
SIO_010081: ADAT1
so part of: ADAT1
location: complement(join(22793..23337,23578..24167,31181..31267,32936..33035,34741..34886,37278..37893,39259..39389,40159..40213,42496..42564,43320..43511,43731..43998))
location: region:22793-43998:-1
so has part: feature:43731-43998:-1:exon
so has part: feature:43320-43511:-1:exon
so has part: feature:42496-42564:-1:exon
so has part: feature:40159-40213:-1:exon
so has part: feature:39259-39389:-1:exon
so has part: feature:37278-37893:-1:exon
so has part: feature:34741-34886:-1:exon
so has part: feature:32936-33035:-1:exon
so has part: feature:31181-31267:-1:exon
so has part: feature:23578-24167:-1:exon
so has part: feature:22793-23337:-1:exon

position:22793:-1
position: 22793
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:43998:-1
position: 43998
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:43731-43998:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:43320-43511:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:42496-42564:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:40159-40213:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:39259-39389:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:37278-37893:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:34741-34886:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:32936-33035:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:31181-31267:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:23578-24167:-1:exon

position:23578:-1
position: 23578
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:22793-23337:-1:exon

position:23337:-1
position: 23337
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

ADAT1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8869
gene: ADAT1
product: adenosine deaminase tRNA specific 1, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 7 long SRA reads, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 7 samples with support for all annotated introns
transcript id: XM_040571060.1
SIO_010081: ADAT1
subclass of: SO_0000673
so part of: ADAT1
location: complement(join(24013..24167,31156..31267,32936..33035,34741..34886,37278..37893,39259..39389,40159..40213,42496..42564,43320..43511,43731..43999))
location: region:24013-43999:-1
so has part: feature:43731-43999:-1:exon
so has part: feature:43320-43511:-1:exon
so has part: feature:42496-42564:-1:exon
so has part: feature:40159-40213:-1:exon
so has part: feature:39259-39389:-1:exon
so has part: feature:37278-37893:-1:exon
so has part: feature:34741-34886:-1:exon
so has part: feature:32936-33035:-1:exon
so has part: feature:31156-31267:-1:exon
so has part: feature:24013-24167:-1:exon

position:24013:-1
position: 24013
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:43731-43999:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:43320-43511:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:42496-42564:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:40159-40213:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:39259-39389:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:37278-37893:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:34741-34886:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:32936-33035:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:31156-31267:-1:exon

position:31156:-1
position: 31156
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:24013-24167:-1:exon

ADAT1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8869
gene: ADAT1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: tRNA-specific adenosine deaminase 1 isoform X3
translation: MTQEPRRDGGVMSTGGCCAAGPSGIQPPRLFLGCSVTKEVVAMGTGTKCIGQNKMRKTGDILNDSHAETVAKRSFQRYLLHQMCLAVSYQQCSIFIPGTETGKWKLKPNIIFVFFSSHTPCGDASIIPITEPENQLSKSVNGAGAAGQSAQCSGNHDHLGLKDKRKLEKMSSNHIIKRRKNNDGGWFSMIIEDLPVQQVFVKPEGNANPKSCECSAQMQAANETGLSRLKAVDVYRTGAKCVPGELDDARVPGIGYHRVGLLRVKPGRGDRTRSMSCSDKLARWNVLGCQGALLMHFLQYPVYLSAIIVGKCPYSQEAMRRAIIERCQHVSSLPDGFLTQEVKLLQSELRFEHSRQAVQEVQTNSKTKLVPCSAAISWSAVPEQPLDVTSDGFRQGTTKKGIGSHQSRSKICKVELFHAFQRLVTSISQENLPDTLRMKTLKTYWDYKEAASSYQEAWKVLRSQALLGWVKNAQEYLHFT
SIO_010081: ADAT1
subclass of: SO_0000673
so part of: ADAT1
location: complement(join(24035..24167,31181..31267,32936..33035,34741..34886,37278..37893,39259..39389,40159..40213,42496..42564,43731..43836))
location: region:24035-43836:-1
so has part: feature:43731-43836:-1:exon
so has part: feature:42496-42564:-1:exon
so has part: feature:40159-40213:-1:exon
so has part: feature:39259-39389:-1:exon
so has part: feature:37278-37893:-1:exon
so has part: feature:34741-34886:-1:exon
so has part: feature:32936-33035:-1:exon
so has part: feature:31181-31267:-1:exon
so has part: feature:24035-24167:-1:exon

XP_040426995.1
type: Protein
SIO_000068: ncbiprotein

position:24035:-1
position: 24035
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:43836:-1
position: 43836
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:43731-43836:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:42496-42564:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:40159-40213:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:39259-39389:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:37278-37893:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:34741-34886:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:32936-33035:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:31181-31267:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:24035-24167:-1:exon

ADAT1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8869
gene: ADAT1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: tRNA-specific adenosine deaminase 1 isoform X1
translation: MTQEPRRDGGVMSTGGCCAAGPSGIQPPRLFLGCSETGLAPGAAWSADEIAELCYEHYRTRLPKQGKPDPNREWTSLAAVVKVESAAQREVPARPGNLQVTKEVVAMGTGTKCIGQNKMRKTGDILNDSHAETVAKRSFQRYLLHQMCLAVSYQQCSIFIPGTETGKWKLKPNIIFVFFSSHTPCGDASIIPITEPENQLSKSVNGAGAAGQSAQCSGNHDHLGLKDKRKLEKMSSNHIIKRRKNNDGGWFSMIIEDLPVQQVFVKPEGNANPKSCECSAQMQAANETGLSRLKAVDVYRTGAKCVPGELDDARVPGIGYHRVGLLRVKPGRGDRTRSMSCSDKLARWNVLGCQGALLMHFLQYPVYLSAIIVGKCPYSQEAMRRAIIERCQHVSSLPDGFLTQEVKLLQSELRFEHSRQAVQEVQTNSKTKLVPCSAAISWSAVPEQPLDVTSDGFRQGTTKKGIGSHQSRMKTLKTYWDYKEAASSYQEAWKVLRSQALLGWVKNAQEYLHFT
SIO_010081: ADAT1
subclass of: SO_0000673
so part of: ADAT1
location: complement(join(24035..24167,32936..33035,34741..34886,37278..37893,39259..39389,40159..40213,42496..42564,43320..43511,43731..43836))
location: region:24035-43836:-1
so has part: feature:43731-43836:-1:exon
so has part: feature:43320-43511:-1:exon
so has part: feature:42496-42564:-1:exon
so has part: feature:40159-40213:-1:exon
so has part: feature:39259-39389:-1:exon
so has part: feature:37278-37893:-1:exon
so has part: feature:34741-34886:-1:exon
so has part: feature:32936-33035:-1:exon
so has part: feature:24035-24167:-1:exon

XP_040426993.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:43731-43836:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:43320-43511:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:42496-42564:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:40159-40213:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:39259-39389:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:37278-37893:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:34741-34886:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:32936-33035:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:24035-24167:-1:exon

ADAT1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8869
gene: ADAT1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: tRNA-specific adenosine deaminase 1 isoform X4
translation: MTQEPRRDGGVMSTGGCCAAGPSGIQPPRLFLGCSETGLAPGAAWSADEIAELCYEHYRTRLPKQGKPDPNREWTSLAAVVKVESAAQREVPARPGNLQVTKEVVAMGTGTKCIGQNKMRKTGDILNDSHAETVAKRSFQRYLLHQMCLAVSYQQCSIFIPGTETGKWKLKPNIIFVFFSSHTPCGDASIIPITEPENQLSKSVNGAGAAGQSAQCSGNHDHLGLKDKRKLEKMSSNHIIKRRKNNDGGWFSMIIEDLPVQQVFVKPEGNANPKSCECSAQMQAANETGLSRLKAVDVYRTGAKCVPGELDDARVPGIGYHRVGLLRVKPGRGDRTRSMSCSDKLARWNVLGCQGALLMHFLQYPVYLSAIIVGKCPYSQEAMRRAIIERCQHVSSLPDGFLTQEVKLLQSELRFEHSRQAVQEVQTNSKTKLVPCSAAISWSAVPEQPLDVTSDGFRQGTTKKGIGSHQSRSKICKVELFHAFQRLVTSISQENLPDTLRMKTLKTYWDYKEAASSYQEAWKVLRSQALLGWVKNAQEYLHFT
SIO_010081: ADAT1
subclass of: SO_0000673
so part of: ADAT1
location: complement(join(24035..24167,31181..31267,32936..33035,34741..34886,37278..37893,39259..39389,40159..40213,42496..42564,43320..43511,43731..43836))
location: region:24035-43836:-1
so has part: feature:43731-43836:-1:exon
so has part: feature:43320-43511:-1:exon
so has part: feature:42496-42564:-1:exon
so has part: feature:40159-40213:-1:exon
so has part: feature:39259-39389:-1:exon
so has part: feature:37278-37893:-1:exon
so has part: feature:34741-34886:-1:exon
so has part: feature:32936-33035:-1:exon
so has part: feature:31181-31267:-1:exon
so has part: feature:24035-24167:-1:exon

XP_040426996.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:43731-43836:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:43320-43511:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:42496-42564:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:40159-40213:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:39259-39389:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:37278-37893:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:34741-34886:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:32936-33035:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:31181-31267:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:24035-24167:-1:exon

ADAT1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8869
gene: ADAT1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: tRNA-specific adenosine deaminase 1 isoform X2
translation: MTQEPRRDGGVMSTGGCCAAGPSGIQPPRLFLGCSETGLAPGAAWSADEIAELCYEHYRTRLPKQGKPDPNREWTSLAAVVKVESAAQREVPARPGNLQVTKEVVAMGTGTKCIGQNKMRKTGDILNDSHAETVAKRSFQRYLLHQMCLAVSYQQCSIFIPGTETGKWKLKPNIIFVFFSSHTPCGDASIIPITEPENQLSKSVNGAGAAGQSAQCSGNHDHLGLKDKRKLEKMSSNHIIKRRKNNDGGWFSMIIEDLPVQQVFVKPEGNANPKSCECSAQMQAANETGLSRLKAVDVYRTGAKCVPGELDDARVPGIGYHRVGLLRVKPGRGDRTRSMSCSDKLARWNVLGCQGALLMHFLQYPVYLSAIIVGKCPYSQEAMRRAIIERCQHVSSLPDGFLTQEVKLLQSELRFEHSRQAVQEVQTNSKTKLVPCSAAISWSAVPEQPLDVTSDGFRQGTTKKGIGSHQSRSKICKVELFHAFQRLVTSISQENLPDTLR
SIO_010081: ADAT1
subclass of: SO_0000673
so part of: ADAT1
location: complement(join(31177..31267,32936..33035,34741..34886,37278..37893,39259..39389,40159..40213,42496..42564,43320..43511,43731..43836))
location: region:31177-43836:-1
so has part: feature:43731-43836:-1:exon
so has part: feature:43320-43511:-1:exon
so has part: feature:42496-42564:-1:exon
so has part: feature:40159-40213:-1:exon
so has part: feature:39259-39389:-1:exon
so has part: feature:37278-37893:-1:exon
so has part: feature:34741-34886:-1:exon
so has part: feature:32936-33035:-1:exon
so has part: feature:31177-31267:-1:exon

XP_040426994.1
type: Protein
SIO_000068: ncbiprotein

position:31177:-1
position: 31177
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:43731-43836:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:43320-43511:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:42496-42564:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:40159-40213:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:39259-39389:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:37278-37893:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:34741-34886:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:32936-33035:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:31177-31267:-1:exon

ADAT1
type: Miscellaneous RNA
subclass of: SO_0000673
RO_0002162: 8869
gene: ADAT1
product: adenosine deaminase tRNA specific 1, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 7 long SRA reads, and 99% coverage of the annotated genomic feature by RNAseq alignments, including 12 samples with support for all annotated introns
transcript id: XR_005823593.1
SIO_010081: ADAT1
so part of: ADAT1
location: complement(join(31300..32621,32773..33035,34741..34886,37278..37893,39259..39389,40159..40213,42496..42564,43320..43511,43731..43999))
location: region:31300-43999:-1
so has part: feature:43731-43999:-1:exon
so has part: feature:43320-43511:-1:exon
so has part: feature:42496-42564:-1:exon
so has part: feature:40159-40213:-1:exon
so has part: feature:39259-39389:-1:exon
so has part: feature:37278-37893:-1:exon
so has part: feature:34741-34886:-1:exon
so has part: feature:32773-33035:-1:exon
so has part: feature:31300-32621:-1:exon

position:31300:-1
position: 31300
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:43731-43999:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:43320-43511:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:42496-42564:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:40159-40213:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:39259-39389:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:37278-37893:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:34741-34886:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:32773-33035:-1:exon

position:32773:-1
position: 32773
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:31300-32621:-1:exon

position:32621:-1
position: 32621
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

KARS1
type: Gene
subclass of: SO_0000704
RO_0002162: 8869
gene: KARS1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(44118..54378)
location: region:44118-54378:-1
so has part: feature:44118-54378:-1:exon
subclass of: SO_0000010

121076595
type: Gene
SIO_000068: ncbigene

position:44118:-1
position: 44118
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:54378:-1
position: 54378
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:44118-54378:-1:exon

KARS1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8869
gene: KARS1
product: lysyl-tRNA synthetase 1, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 353 long SRA reads, 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 12 samples with support for all annotated introns
transcript id: XM_040571057.1
SIO_010081: KARS1
subclass of: SO_0000673
so part of: KARS1
location: complement(join(44118..44242,44452..44595,46250..46376,46697..46782,47463..47548,48356..48529,48616..48778,49636..49755,51664..51789,51969..52155,52436..52529,52944..53109,53309..53459,54186..54378))
location: region:44118-54378:-1
so has part: feature:54186-54378:-1:exon
so has part: feature:53309-53459:-1:exon
so has part: feature:52944-53109:-1:exon
so has part: feature:52436-52529:-1:exon
so has part: feature:51969-52155:-1:exon
so has part: feature:51664-51789:-1:exon
so has part: feature:49636-49755:-1:exon
so has part: feature:48616-48778:-1:exon
so has part: feature:48356-48529:-1:exon
so has part: feature:47463-47548:-1:exon
so has part: feature:46697-46782:-1:exon
so has part: feature:46250-46376:-1:exon
so has part: feature:44452-44595:-1:exon
so has part: feature:44118-44242:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:54186-54378:-1:exon

position:54186:-1
position: 54186
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:53309-53459:-1:exon

position:53309:-1
position: 53309
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:53459:-1
position: 53459
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:52944-53109:-1:exon

position:52944:-1
position: 52944
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:53109:-1
position: 53109
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:52436-52529:-1:exon

position:52436:-1
position: 52436
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:52529:-1
position: 52529
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:51969-52155:-1:exon

position:51969:-1
position: 51969
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:52155:-1
position: 52155
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:51664-51789:-1:exon

position:51664:-1
position: 51664
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:51789:-1
position: 51789
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:49636-49755:-1:exon

position:49636:-1
position: 49636
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:49755:-1
position: 49755
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:48616-48778:-1:exon

position:48616:-1
position: 48616
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:48778:-1
position: 48778
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:48356-48529:-1:exon

position:48356:-1
position: 48356
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:48529:-1
position: 48529
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:47463-47548:-1:exon

position:47463:-1
position: 47463
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:47548:-1
position: 47548
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:46697-46782:-1:exon

position:46697:-1
position: 46697
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:46782:-1
position: 46782
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:46250-46376:-1:exon

position:46250:-1
position: 46250
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:46376:-1
position: 46376
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:44452-44595:-1:exon

position:44452:-1
position: 44452
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:44595:-1
position: 44595
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:44118-44242:-1:exon

position:44242:-1
position: 44242
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

KARS1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8869
gene: KARS1
product: lysyl-tRNA synthetase 1, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 78 long SRA reads, 2 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments, including 12 samples with support for all annotated introns
transcript id: XM_040571056.1
SIO_010081: KARS1
subclass of: SO_0000673
so part of: KARS1
location: complement(join(44118..44242,44452..44595,46250..46376,46697..46782,47463..47548,48356..48529,48616..48778,49636..49755,51664..51789,51969..52155,52436..52529,52944..53109,53309..53459,53967..54284))
location: region:44118-54284:-1
so has part: feature:53967-54284:-1:exon
so has part: feature:53309-53459:-1:exon
so has part: feature:52944-53109:-1:exon
so has part: feature:52436-52529:-1:exon
so has part: feature:51969-52155:-1:exon
so has part: feature:51664-51789:-1:exon
so has part: feature:49636-49755:-1:exon
so has part: feature:48616-48778:-1:exon
so has part: feature:48356-48529:-1:exon
so has part: feature:47463-47548:-1:exon
so has part: feature:46697-46782:-1:exon
so has part: feature:46250-46376:-1:exon
so has part: feature:44452-44595:-1:exon
so has part: feature:44118-44242:-1:exon

position:54284:-1
position: 54284
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:53967-54284:-1:exon

position:53967:-1
position: 53967
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:53309-53459:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:52944-53109:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:52436-52529:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:51969-52155:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:51664-51789:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:49636-49755:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:48616-48778:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:48356-48529:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:47463-47548:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:46697-46782:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:46250-46376:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:44452-44595:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:44118-44242:-1:exon

KARS1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8869
gene: KARS1
product: lysyl-tRNA synthetase 1, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 33 long SRA reads, 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 12 samples with support for all annotated introns
transcript id: XM_040571058.1
SIO_010081: KARS1
subclass of: SO_0000673
so part of: KARS1
location: complement(join(44118..44242,44452..44595,46250..46376,46697..46782,47463..47548,48356..48529,48616..48778,49636..49755,51664..51789,51969..52155,52436..52529,52944..53109,53309..53459,53705..53723))
location: region:44118-53723:-1
so has part: feature:53705-53723:-1:exon
so has part: feature:53309-53459:-1:exon
so has part: feature:52944-53109:-1:exon
so has part: feature:52436-52529:-1:exon
so has part: feature:51969-52155:-1:exon
so has part: feature:51664-51789:-1:exon
so has part: feature:49636-49755:-1:exon
so has part: feature:48616-48778:-1:exon
so has part: feature:48356-48529:-1:exon
so has part: feature:47463-47548:-1:exon
so has part: feature:46697-46782:-1:exon
so has part: feature:46250-46376:-1:exon
so has part: feature:44452-44595:-1:exon
so has part: feature:44118-44242:-1:exon

position:53723:-1
position: 53723
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:53705-53723:-1:exon

position:53705:-1
position: 53705
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:53309-53459:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:52944-53109:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:52436-52529:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:51969-52155:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:51664-51789:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:49636-49755:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:48616-48778:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:48356-48529:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:47463-47548:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:46697-46782:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:46250-46376:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:44452-44595:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:44118-44242:-1:exon

KARS1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8869
gene: KARS1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: lysine--tRNA ligase isoform X2
translation: MATAAERACDAGDAEPRLSKNELKRRLKAERKIAEKEAKQKEQSEKHSNKPSLTSDSENNIGADEENLDPNQYYKIRSQAIQQLQGTNEDPYPHKFHVDLSLSDFIEKYHHLQPGDHLTDITVRVAGRIHAKRASGGKLIFYDLRGEGVKLQVMANSRLYKSEEEYFCINNKLRRGDIIGVEGNPGKTKKGELSIIPYEIILLSPCLHMLPHLHFGLKDKETRYRQRYLDLILNDYVRQKFITRAKIVTYIRSFLDELGFLEIETPMMNIIPGGAMARPFITYHNELDMNLYMRIAPELYHKMVVVGGLDRVYEIGRQFRNEGIDLTHNPEFTTCEFYMAYADYHDLMEITEKLLSGMVKHITGSYKITYHPDGQDGQAYEIDFTLPFRRISMVDELEKVLGVKFPSAESFETEETRRFFDDLCVARNVECPPPRTTARLLDRLVGEFLEVTCINPTFICDHPQIMSPLAKWHRAHRGLTERFELFVMKKEVCNAYTELNDPFRQRQLFEDQAKAKAAGDDEAMFIDENFCTALEYGLPPTAGWGMGIDRFTMFLTDSSNIKEVLLFPAMKPEDKRKEAQPDRPAEGTSV
SIO_010081: KARS1
subclass of: SO_0000673
so part of: KARS1
location: complement(join(44156..44242,44452..44595,46250..46376,46697..46782,47463..47548,48356..48529,48616..48778,49636..49755,51664..51789,51969..52155,52436..52529,52944..53109,53309..53459,54186..54247))
location: region:44156-54247:-1
so has part: feature:54186-54247:-1:exon
so has part: feature:53309-53459:-1:exon
so has part: feature:52944-53109:-1:exon
so has part: feature:52436-52529:-1:exon
so has part: feature:51969-52155:-1:exon
so has part: feature:51664-51789:-1:exon
so has part: feature:49636-49755:-1:exon
so has part: feature:48616-48778:-1:exon
so has part: feature:48356-48529:-1:exon
so has part: feature:47463-47548:-1:exon
so has part: feature:46697-46782:-1:exon
so has part: feature:46250-46376:-1:exon
so has part: feature:44452-44595:-1:exon
so has part: feature:44156-44242:-1:exon

XP_040426991.1
type: Protein
SIO_000068: ncbiprotein

position:44156:-1
position: 44156
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:54247:-1
position: 54247
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:54186-54247:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:53309-53459:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:52944-53109:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:52436-52529:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:51969-52155:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:51664-51789:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:49636-49755:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:48616-48778:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:48356-48529:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:47463-47548:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:46697-46782:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:46250-46376:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:44452-44595:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:44156-44242:-1:exon

KARS1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8869
gene: KARS1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: lysine--tRNA ligase isoform X1
translation: MLSPAAARLRGWAWRAAPALRWRQALHDQSSELKRRLKAERKIAEKEAKQKEQSEKHSNKPSLTSDSENNIGADEENLDPNQYYKIRSQAIQQLQGTNEDPYPHKFHVDLSLSDFIEKYHHLQPGDHLTDITVRVAGRIHAKRASGGKLIFYDLRGEGVKLQVMANSRLYKSEEEYFCINNKLRRGDIIGVEGNPGKTKKGELSIIPYEIILLSPCLHMLPHLHFGLKDKETRYRQRYLDLILNDYVRQKFITRAKIVTYIRSFLDELGFLEIETPMMNIIPGGAMARPFITYHNELDMNLYMRIAPELYHKMVVVGGLDRVYEIGRQFRNEGIDLTHNPEFTTCEFYMAYADYHDLMEITEKLLSGMVKHITGSYKITYHPDGQDGQAYEIDFTLPFRRISMVDELEKVLGVKFPSAESFETEETRRFFDDLCVARNVECPPPRTTARLLDRLVGEFLEVTCINPTFICDHPQIMSPLAKWHRAHRGLTERFELFVMKKEVCNAYTELNDPFRQRQLFEDQAKAKAAGDDEAMFIDENFCTALEYGLPPTAGWGMGIDRFTMFLTDSSNIKEVLLFPAMKPEDKRKEAQPDRPAEGTSV
SIO_010081: KARS1
subclass of: SO_0000673
so part of: KARS1
location: complement(join(44156..44242,44452..44595,46250..46376,46697..46782,47463..47548,48356..48529,48616..48778,49636..49755,51664..51789,51969..52155,52436..52529,52944..53109,53309..53459,53967..54058))
location: region:44156-54058:-1
so has part: feature:53967-54058:-1:exon
so has part: feature:53309-53459:-1:exon
so has part: feature:52944-53109:-1:exon
so has part: feature:52436-52529:-1:exon
so has part: feature:51969-52155:-1:exon
so has part: feature:51664-51789:-1:exon
so has part: feature:49636-49755:-1:exon
so has part: feature:48616-48778:-1:exon
so has part: feature:48356-48529:-1:exon
so has part: feature:47463-47548:-1:exon
so has part: feature:46697-46782:-1:exon
so has part: feature:46250-46376:-1:exon
so has part: feature:44452-44595:-1:exon
so has part: feature:44156-44242:-1:exon

XP_040426990.1
type: Protein
SIO_000068: ncbiprotein

position:54058:-1
position: 54058
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:53967-54058:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:53309-53459:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:52944-53109:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:52436-52529:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:51969-52155:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:51664-51789:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:49636-49755:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:48616-48778:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:48356-48529:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:47463-47548:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:46697-46782:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:46250-46376:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:44452-44595:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:44156-44242:-1:exon

KARS1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8869
gene: KARS1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: lysine--tRNA ligase isoform X3
translation: MANSRLYKSEEEYFCINNKLRRGDIIGVEGNPGKTKKGELSIIPYEIILLSPCLHMLPHLHFGLKDKETRYRQRYLDLILNDYVRQKFITRAKIVTYIRSFLDELGFLEIETPMMNIIPGGAMARPFITYHNELDMNLYMRIAPELYHKMVVVGGLDRVYEIGRQFRNEGIDLTHNPEFTTCEFYMAYADYHDLMEITEKLLSGMVKHITGSYKITYHPDGQDGQAYEIDFTLPFRRISMVDELEKVLGVKFPSAESFETEETRRFFDDLCVARNVECPPPRTTARLLDRLVGEFLEVTCINPTFICDHPQIMSPLAKWHRAHRGLTERFELFVMKKEVCNAYTELNDPFRQRQLFEDQAKAKAAGDDEAMFIDENFCTALEYGLPPTAGWGMGIDRFTMFLTDSSNIKEVLLFPAMKPEDKRKEAQPDRPAEGTSV
SIO_010081: KARS1
subclass of: SO_0000673
so part of: KARS1
location: complement(join(44156..44242,44452..44595,46250..46376,46697..46782,47463..47548,48356..48529,48616..48778,49636..49755,51664..51789,51969..52155,52436..52449))
location: region:44156-52449:-1
so has part: feature:52436-52449:-1:exon
so has part: feature:51969-52155:-1:exon
so has part: feature:51664-51789:-1:exon
so has part: feature:49636-49755:-1:exon
so has part: feature:48616-48778:-1:exon
so has part: feature:48356-48529:-1:exon
so has part: feature:47463-47548:-1:exon
so has part: feature:46697-46782:-1:exon
so has part: feature:46250-46376:-1:exon
so has part: feature:44452-44595:-1:exon
so has part: feature:44156-44242:-1:exon

XP_040426992.1
type: Protein
SIO_000068: ncbiprotein

position:52449:-1
position: 52449
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:52436-52449:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:51969-52155:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:51664-51789:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:49636-49755:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:48616-48778:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:48356-48529:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:47463-47548:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:46697-46782:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:46250-46376:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:44452-44595:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:44156-44242:-1:exon

LOC121076599
type: Gene
subclass of: SO_0000704
RO_0002162: 8869
gene: LOC121076599
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 54304..57777
location: region:54304-57777:1
so has part: feature:54304-57777:1:exon
subclass of: SO_0000010

121076599
type: Gene
SIO_000068: ncbigene

position:54304:1
position: 54304
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:57777:1
position: 57777
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:54304-57777:1:exon

LOC121076599
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8869
gene: LOC121076599
product: TERF2 interacting protein
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 50 long SRA reads, 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 12 samples with support for all annotated introns
transcript id: XM_040571070.1
SIO_010081: LOC121076599
subclass of: SO_0000673
so part of: LOC121076599
location: join(54304..54802,54887..54966,55851..57777)
location: region:54304-57777:1
so has part: feature:54304-54802:1:exon
so has part: feature:54887-54966:1:exon
so has part: feature:55851-57777:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:54304-54802:1:exon

position:54802:1
position: 54802
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:54887-54966:1:exon

position:54887:1
position: 54887
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:54966:1
position: 54966
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:55851-57777:1:exon

position:55851:1
position: 55851
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC121076599
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8869
gene: LOC121076599
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: telomeric repeat-binding factor 2-interacting protein 1
translation: MAAGGNAAAGRSRRLFLWDDGRPMRFYVRPGLTKLRLAPLLLAGGGRLCRIQEPGAVLLAQPGEVVPGGAVSAEYVTECVERNQRLPLEPFRLPAAPPAPPAASPRGRLAFTEAEDAALLQAVRGRGGRRVGGRTLWKELERAGLTRHTWQAMRDRYLRHLRPLHGEPQQAEEERAQGMGIFEAANREFESDESGSDTSDALEELPTQVGGGKSPREMAAGLKTGMEDCAFPGTQLQREDRPRSTCSSSSVVGEVVKTMQHFMERFNVDLFTVTQAFLKNTGEVETTSYFLQTGQRLDGYPVWSREDDLELQKDDEHVRSKLIAKFGAENVAKRVAFRKS
SIO_010081: LOC121076599
subclass of: SO_0000673
so part of: LOC121076599
location: join(54304..54802,54887..54966,55851..56294)
location: region:54304-56294:1
so has part: feature:54304-54802:1:exon
so has part: feature:54887-54966:1:exon
so has part: feature:55851-56294:1:exon

XP_040427004.1
type: Protein
SIO_000068: ncbiprotein

position:56294:1
position: 56294
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:54304-54802:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:54887-54966:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:55851-56294:1:exon

LOC121076597
type: Gene
subclass of: SO_0000704
RO_0002162: 8869
gene: LOC121076597
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(61875..74898)
location: region:61875-74898:-1
so has part: feature:61875-74898:-1:exon
subclass of: SO_0000010

121076597
type: Gene
SIO_000068: ncbigene

position:61875:-1
position: 61875
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:74898:-1
position: 74898
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:61875-74898:-1:exon

LOC121076597
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8869
gene: LOC121076597
product: carbohydrate sulfotransferase 4-like, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 long SRA read, 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_040571063.1
SIO_010081: LOC121076597
subclass of: SO_0000673
so part of: LOC121076597
location: complement(join(61875..64319,74658..74898))
location: region:61875-74898:-1
so has part: feature:74658-74898:-1:exon
so has part: feature:61875-64319:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:74658-74898:-1:exon

position:74658:-1
position: 74658
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:61875-64319:-1:exon

position:64319:-1
position: 64319
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC121076597
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8869
gene: LOC121076597
product: carbohydrate sulfotransferase 4-like, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 long SRA reads, 5 Proteins, and 97% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
transcript id: XM_040571064.1
SIO_010081: LOC121076597
subclass of: SO_0000673
so part of: LOC121076597
location: complement(join(61876..64319,68067..68310))
location: region:61876-68310:-1
so has part: feature:68067-68310:-1:exon
so has part: feature:61876-64319:-1:exon

position:61876:-1
position: 61876
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:68310:-1
position: 68310
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:68067-68310:-1:exon

position:68067:-1
position: 68067
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:61876-64319:-1:exon

LOC121076597
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8869
gene: LOC121076597
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: carbohydrate sulfotransferase 4-like isoform X1
translation: MALGYESLPGPTCHPPACRHHVCLHPEGSALGSCMEAAGRPWQTTVQPAGELGSIATMMKSRWVQVLLSLAVLSFLIHFLTCSNAPMEEKPSPVHILILSSWRSGSSFTGQIFSQHPSVFYLMEPAWHVWVAMYQNSAKVLQMAVRDLVRSVFLCDMSVFDVYMSTQKKKSDLFQWETSRALCSPPACDLFSRNDIITAGNCRTVCGKYPFSKVEEACKTYSHIAIKEVRFFDLKVLYSLFTDPSLNLKVIHLVRDPRAVFRSRENTVVDLKRDSDIVLGSQKMKGEMGPYNAMQEICKSHVEIYKAGRQAIPSFLKDRYLLVRYEDIVRDPLAKAAQMYRFAELHFTPELQKWVHNITHGKGQGGNAFEIGSRDALSISEAWRKTLPFQKIEKVQNACKDAMDLLGYRLVHSEEEQKNLSLDLLFGQNSSE
SIO_010081: LOC121076597
subclass of: SO_0000673
so part of: LOC121076597
location: complement(join(63179..64319,74658..74815))
location: region:63179-74815:-1
so has part: feature:74658-74815:-1:exon
so has part: feature:63179-64319:-1:exon

XP_040426997.1
type: Protein
SIO_000068: ncbiprotein

position:63179:-1
position: 63179
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:74815:-1
position: 74815
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:74658-74815:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:63179-64319:-1:exon

LOC121076597
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8869
gene: LOC121076597
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: carbohydrate sulfotransferase 4-like isoform X2
translation: MLRSIATMMKSRWVQVLLSLAVLSFLIHFLTCSNAPMEEKPSPVHILILSSWRSGSSFTGQIFSQHPSVFYLMEPAWHVWVAMYQNSAKVLQMAVRDLVRSVFLCDMSVFDVYMSTQKKKSDLFQWETSRALCSPPACDLFSRNDIITAGNCRTVCGKYPFSKVEEACKTYSHIAIKEVRFFDLKVLYSLFTDPSLNLKVIHLVRDPRAVFRSRENTVVDLKRDSDIVLGSQKMKGEMGPYNAMQEICKSHVEIYKAGRQAIPSFLKDRYLLVRYEDIVRDPLAKAAQMYRFAELHFTPELQKWVHNITHGKGQGGNAFEIGSRDALSISEAWRKTLPFQKIEKVQNACKDAMDLLGYRLVHSEEEQKNLSLDLLFGQNSSE
SIO_010081: LOC121076597
subclass of: SO_0000673
so part of: LOC121076597
location: complement(join(63179..64319,68067..68074))
location: region:63179-68074:-1
so has part: feature:68067-68074:-1:exon
so has part: feature:63179-64319:-1:exon

XP_040426998.1
type: Protein
SIO_000068: ncbiprotein

position:68074:-1
position: 68074
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:68067-68074:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:63179-64319:-1:exon

TAT
type: Gene
subclass of: SO_0000704
RO_0002162: 8869
gene: TAT
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(75266..86790)
location: region:75266-86790:-1
so has part: feature:75266-86790:-1:exon
subclass of: SO_0000010

121076601
type: Gene
SIO_000068: ncbigene

position:75266:-1
position: 75266
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:86790:-1
position: 86790
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:75266-86790:-1:exon

TAT
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8869
gene: TAT
product: tyrosine aminotransferase
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4139 long SRA reads, 15 Proteins, and 90% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_040571072.1
SIO_010081: TAT
subclass of: SO_0000673
so part of: TAT
location: complement(join(75266..77725,78529..78627,80070..80153,80503..80631,81472..81624,82002..82054,82629..82767,83000..83158,83520..83587,84428..84532,84746..84988,86660..86790))
location: region:75266-86790:-1
so has part: feature:86660-86790:-1:exon
so has part: feature:84746-84988:-1:exon
so has part: feature:84428-84532:-1:exon
so has part: feature:83520-83587:-1:exon
so has part: feature:83000-83158:-1:exon
so has part: feature:82629-82767:-1:exon
so has part: feature:82002-82054:-1:exon
so has part: feature:81472-81624:-1:exon
so has part: feature:80503-80631:-1:exon
so has part: feature:80070-80153:-1:exon
so has part: feature:78529-78627:-1:exon
so has part: feature:75266-77725:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:86660-86790:-1:exon

position:86660:-1
position: 86660
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:84746-84988:-1:exon

position:84746:-1
position: 84746
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:84988:-1
position: 84988
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:84428-84532:-1:exon

position:84428:-1
position: 84428
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:84532:-1
position: 84532
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:83520-83587:-1:exon

position:83520:-1
position: 83520
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:83587:-1
position: 83587
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:83000-83158:-1:exon

position:83000:-1
position: 83000
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:83158:-1
position: 83158
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:82629-82767:-1:exon

position:82629:-1
position: 82629
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:82767:-1
position: 82767
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:82002-82054:-1:exon

position:82002:-1
position: 82002
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:82054:-1
position: 82054
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:81472-81624:-1:exon

position:81472:-1
position: 81472
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:81624:-1
position: 81624
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:80503-80631:-1:exon

position:80503:-1
position: 80503
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:80631:-1
position: 80631
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:80070-80153:-1:exon

position:80070:-1
position: 80070
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:80153:-1
position: 80153
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:78529-78627:-1:exon

position:78529:-1
position: 78529
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:78627:-1
position: 78627
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:75266-77725:-1:exon

position:77725:-1
position: 77725
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

TAT
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8869
gene: TAT
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: tyrosine aminotransferase
translation: MDSYLIQVNGPGGHAPLLDVHLKTNGNSMSLGKVKGRKPRWAVRASEMSKKTFNPVRAIVDSMKVEPNPKKAMISLSLGDPTVFGNLPTNDEVTRAVKEVLDSGRYNGYAPSVGYQSCREAVAAYYNCPEAPLEAQDVILTSGCSQAIELALAVLANPGQNILVPRPGFSLYKTLALSMGIEVKLYNLLPEKSWEIDLKHLESLVDEKTACLIVNNPSNPCGSVFSKSHLQKILAVASRQCVPILADEIYGDMVFTDCKYEPIATLSTNVPILSCGGLAKRWLVPGWRMGWILIHDRRDIFGNEIRDGLLRLSQRILGPCTIVQGALERILHQTPPEFYHNTLSILKSNADLCYAALSAIPGLQPVRPAGAMYLMVEIEMEHFPEFENDVEFTERLISEQSVFCLPASCFEYPNFFRVVITVPEEMILEACSRIQEFCEMHYQGAEGAQDLECDK
SIO_010081: TAT
subclass of: SO_0000673
so part of: TAT
location: complement(join(77582..77725,78529..78627,80070..80153,80503..80631,81472..81624,82002..82054,82629..82767,83000..83158,83520..83587,84428..84532,84746..84980))
location: region:77582-84980:-1
so has part: feature:84746-84980:-1:exon
so has part: feature:84428-84532:-1:exon
so has part: feature:83520-83587:-1:exon
so has part: feature:83000-83158:-1:exon
so has part: feature:82629-82767:-1:exon
so has part: feature:82002-82054:-1:exon
so has part: feature:81472-81624:-1:exon
so has part: feature:80503-80631:-1:exon
so has part: feature:80070-80153:-1:exon
so has part: feature:78529-78627:-1:exon
so has part: feature:77582-77725:-1:exon

XP_040427006.1
type: Protein
SIO_000068: ncbiprotein

position:77582:-1
position: 77582
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:84980:-1
position: 84980
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:84746-84980:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:84428-84532:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:83520-83587:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:83000-83158:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:82629-82767:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:82002-82054:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:81472-81624:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:80503-80631:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:80070-80153:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:78529-78627:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:77582-77725:-1:exon

MARVELD3
type: Gene
subclass of: SO_0000704
RO_0002162: 8869
gene: MARVELD3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 94258..97089
location: region:94258-97089:1
so has part: feature:94258-97089:1:exon
subclass of: SO_0000010

121076988
type: Gene
SIO_000068: ncbigene

position:94258:1
position: 94258
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:97089:1
position: 97089
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:94258-97089:1:exon

MARVELD3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8869
gene: MARVELD3
product: MARVEL domain containing 3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 12 long SRA reads, 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 6 samples with support for all annotated introns
transcript id: XM_040571705.1
SIO_010081: MARVELD3
subclass of: SO_0000673
so part of: MARVELD3
location: join(94258..94360,94470..94570,94710..97089)
location: region:94258-97089:1
so has part: feature:94258-94360:1:exon
so has part: feature:94470-94570:1:exon
so has part: feature:94710-97089:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:94258-94360:1:exon

position:94360:1
position: 94360
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:94470-94570:1:exon

position:94470:1
position: 94470
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:94570:1
position: 94570
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:94710-97089:1:exon

position:94710:1
position: 94710
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

MARVELD3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8869
gene: MARVELD3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: MARVEL domain-containing protein 3
translation: MAERSGARVPRAGGTGAGGRAVSGAGPQGPPGSCAAAPGPLECRRCRYLCTARACCQGVGALLAALVLVCSSVSYGSTGGYTGVASLGGIYYYQYGGAYSGFSGADGEKAQQLDQRFHLLKLPIARAAMAMGGSLMVFSCLLILFGVLQLPWHFPAWLLLECTLDAVVAIGLVPALYYFFHHLLEVYNSSVCKEREQLYQSKGYQGFRCSLHGAEIAAGLLGCIAVMAYLLSAGLAVKGYRTVCKLKQKPVQVYEL
SIO_010081: MARVELD3
subclass of: SO_0000673
so part of: MARVELD3
location: join(94302..94360,94470..94570,94710..95320)
location: region:94302-95320:1
so has part: feature:94302-94360:1:exon
so has part: feature:94470-94570:1:exon
so has part: feature:94710-95320:1:exon

XP_040427639.1
type: Protein
SIO_000068: ncbiprotein

position:94302:1
position: 94302
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:95320:1
position: 95320
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:94302-94360:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:94470-94570:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:94710-95320:1:exon

PHLPP2
type: Gene
subclass of: SO_0000704
RO_0002162: 8869
gene: PHLPP2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(97802..>131552)
location: region:97802-131552:-1
so has part: feature:97802-131552:-1:exon
subclass of: SO_0000010

121076633
type: Gene
SIO_000068: ncbigene

position:97802:-1
position: 97802
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:131552:-1
position: 131552
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition

urn:…
SIO_000300: 1
SIO_000628: feature:97802-131552:-1:exon

PHLPP2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8869
gene: PHLPP2
product: PH domain and leucine rich repeat protein phosphatase 2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 28 long SRA reads, 8 Proteins, and 98% coverage of the annotated genomic feature by RNAseq alignments, including 6 samples with support for all annotated introns
transcript id: XM_040571128.1
SIO_010081: PHLPP2
subclass of: SO_0000673
so part of: PHLPP2
location: complement(join(97802..102600,103829..104060,104194..104382,104845..104955,105345..105475,105989..106151,107644..107844,108599..108754,110142..110237,110964..111024,111536..111738,112574..112804,115165..115311,116334..116488,117689..117814,118234..118424,121258..121391,130843..131087,131358..>131552))
location: region:97802-131552:-1
so has part: feature:131358-131552:-1:exon
so has part: feature:130843-131087:-1:exon
so has part: feature:121258-121391:-1:exon
so has part: feature:118234-118424:-1:exon
so has part: feature:117689-117814:-1:exon
so has part: feature:116334-116488:-1:exon
so has part: feature:115165-115311:-1:exon
so has part: feature:112574-112804:-1:exon
so has part: feature:111536-111738:-1:exon
so has part: feature:110964-111024:-1:exon
so has part: feature:110142-110237:-1:exon
so has part: feature:108599-108754:-1:exon
so has part: feature:107644-107844:-1:exon
so has part: feature:105989-106151:-1:exon
so has part: feature:105345-105475:-1:exon
so has part: feature:104845-104955:-1:exon
so has part: feature:104194-104382:-1:exon
so has part: feature:103829-104060:-1:exon
so has part: feature:97802-102600:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:131358-131552:-1:exon

position:131358:-1
position: 131358
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:130843-131087:-1:exon

position:130843:-1
position: 130843
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:131087:-1
position: 131087
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:121258-121391:-1:exon

position:121258:-1
position: 121258
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:121391:-1
position: 121391
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:118234-118424:-1:exon

position:118234:-1
position: 118234
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:118424:-1
position: 118424
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:117689-117814:-1:exon

position:117689:-1
position: 117689
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:117814:-1
position: 117814
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:116334-116488:-1:exon

position:116334:-1
position: 116334
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:116488:-1
position: 116488
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:115165-115311:-1:exon

position:115165:-1
position: 115165
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:115311:-1
position: 115311
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:112574-112804:-1:exon

position:112574:-1
position: 112574
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:112804:-1
position: 112804
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:111536-111738:-1:exon

position:111536:-1
position: 111536
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:111738:-1
position: 111738
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:110964-111024:-1:exon

position:110964:-1
position: 110964
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:111024:-1
position: 111024
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:110142-110237:-1:exon

position:110142:-1
position: 110142
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:110237:-1
position: 110237
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:108599-108754:-1:exon

position:108599:-1
position: 108599
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:108754:-1
position: 108754
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:107644-107844:-1:exon

position:107644:-1
position: 107644
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:107844:-1
position: 107844
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:105989-106151:-1:exon

position:105989:-1
position: 105989
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:106151:-1
position: 106151
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:105345-105475:-1:exon

position:105345:-1
position: 105345
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:105475:-1
position: 105475
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:104845-104955:-1:exon

position:104845:-1
position: 104845
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:104955:-1
position: 104955
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:104194-104382:-1:exon

position:104194:-1
position: 104194
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:104382:-1
position: 104382
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:103829-104060:-1:exon

position:103829:-1
position: 103829
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:104060:-1
position: 104060
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:97802-102600:-1:exon

position:102600:-1
position: 102600
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

PHLPP2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8869
gene: PHLPP2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: PH domain leucine-rich repeat-containing protein phosphatase 2
translation: GAAVAVRGVGVRRAMGEAGTGPVPREGPEPEEDEAAAAAAAAAAAGGGGAPGGRAGPRGGIRVLKRNVKRNGSRSCLNRTRFGSRERDWLREDAGRGCVYVYGRDSASCASSDLRLVLCTVDTPASEICDGEERRNLFLQLHGDLVRRLEPTEKPLQIVYDYLAGLGFDDPVRMQEEAANSDLSCMIRFYSEKPCQVEQLDRILLSGIYNVRKGKTQLHKWAERLVILCGTCLIVSSVKDSHTGKMHILPLVGGKVEEMKRRQYTLAFTSAGAQAQTYHVSFETLAECQRWHRQASTVVSMRLSMVDLSCYSLEEVPEHLFYSQDIIYLNLRHNFMRSCGAGSLDSLCRFSQLKSLNLSHNRLGEFPLSLCEISTLTELNVSCNGLLCLPTQIGKLLNLQSFWLDGNFLTSLPEELGSLQQLSCLGLSFNNFRELPAIFEKLTFLDKLALAGNLLETLDLAVLNRMSHIKSVDLRLNNLKRAADDTPEGNKSVTYMDLRDNHLTDLDLSSLGSLEQLHCERNKLKELTLSGFSLRALYANNNCLTSVNVYPVPGQLTCLELVHNQLQCVPDWACEAKKLEVLDMSYNLLVELPSRILSTLSLRKLMVGHNNLQSLPPLLEHIPLEVLDLQHNLLTELPEMLFFKALNLRYLNVSANSLESLPSACTGEESLSMLQLLYLTNNNLTDQCIPVLAGHTSLRILHLANNNLKAFPASKLSKLEHLEELNLSGNKLKTIPTTVANCKLLHTLIAHSNEISIFPEILHLPHIQIVDLSCNELTEILIPEALPATLQELDLTGNTNLVLEHQTLDIFSHISTLKIDAKPSLTTDSALTSTFWSHGIAEMAGQRNKLCVSTLAMGSFAEGVEAVYGMFDGDKNEELPRLLQCTMADVLLEEVQQSDTMFMSNTFLVSHRKLGMAGQKLGSSAVLCYIRHDLSDPASNFSLMVANVGTCQAILCRSGKPLLLSKVFSLEQCSEDAKRIKEQKAIITEDNKVNGVTCCTRMLGCTYLHPWILPKPHVSSIPLTVQDELLLLGNKALWEHLSYTEAVSAVRHLHDPLAAAKKLCTLAQSYGCQDNVGAMVVCLNISEDSCTCEMHGITLPGPGGFSSTAAKPATPSSSSGIASEFSSELSASEVSSEVGSTASDEHNAVGLDGSLLPRQERRCSLHPLPPSSIFQRQPSSATFSSNQSDNGLDSDDEQPVEGVMTNGSKVEVEVDIHCCKGKGLEFEPPALEYSSSAPGPEDDSGLVLIIQRQNSVNSGTAQGGIKEKCELQKSPSTCCLYGKKLSNGSIVSLEESLNLIEVATEAPKKKTGYFAAPSQMEPEDQFVVPPDLEEEVKEQMKRHQDNGADQEQKEESAVVLPEEFDTAL
SIO_010081: PHLPP2
subclass of: SO_0000673
so part of: PHLPP2
location: complement(join(101461..102600,103829..104060,104194..104382,104845..104955,105345..105475,105989..106151,107644..107844,108599..108754,110142..110237,110964..111024,111536..111738,112574..112804,115165..115311,116334..116488,117689..117814,118234..118424,121258..121391,130843..131087,131358..>131552))
location: region:101461-131552:-1
so has part: feature:131358-131552:-1:exon
so has part: feature:130843-131087:-1:exon
so has part: feature:121258-121391:-1:exon
so has part: feature:118234-118424:-1:exon
so has part: feature:117689-117814:-1:exon
so has part: feature:116334-116488:-1:exon
so has part: feature:115165-115311:-1:exon
so has part: feature:112574-112804:-1:exon
so has part: feature:111536-111738:-1:exon
so has part: feature:110964-111024:-1:exon
so has part: feature:110142-110237:-1:exon
so has part: feature:108599-108754:-1:exon
so has part: feature:107644-107844:-1:exon
so has part: feature:105989-106151:-1:exon
so has part: feature:105345-105475:-1:exon
so has part: feature:104845-104955:-1:exon
so has part: feature:104194-104382:-1:exon
so has part: feature:103829-104060:-1:exon
so has part: feature:101461-102600:-1:exon

XP_040427062.1
type: Protein
SIO_000068: ncbiprotein

position:101461:-1
position: 101461
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:131358-131552:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:130843-131087:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:121258-121391:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:118234-118424:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:117689-117814:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:116334-116488:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:115165-115311:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:112574-112804:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:111536-111738:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:110964-111024:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:110142-110237:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:108599-108754:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:107644-107844:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:105989-106151:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:105345-105475:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:104845-104955:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:104194-104382:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:103829-104060:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:101461-102600:-1:exon

AP1G1
type: Gene
subclass of: SO_0000704
RO_0002162: 8869
gene: AP1G1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(135549..179055)
location: region:135549-179055:-1
so has part: feature:135549-179055:-1:exon
subclass of: SO_0000010

121076978
type: Gene
SIO_000068: ncbigene

position:135549:-1
position: 135549
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:179055:-1
position: 179055
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:135549-179055:-1:exon

AP1G1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8869
gene: AP1G1
product: adaptor related protein complex 1 subunit gamma 1, transcript variant X7
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 33 long SRA reads, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 12 samples with support for all annotated introns
transcript id: XM_040571682.1
SIO_010081: AP1G1
subclass of: SO_0000673
so part of: AP1G1
location: complement(join(135549..136790,139206..139304,140283..140443,140665..140760,141252..141378,141849..141990,144209..144313,144923..145050,145550..145636,145952..146074,147698..147752,148381..148521,151890..152003,152849..152904,153294..153392,153639..153719,154387..154482,158339..158415,159240..159336,160540..160681,163522..163646,168613..168816,178807..179055))
location: region:135549-179055:-1
so has part: feature:178807-179055:-1:exon
so has part: feature:168613-168816:-1:exon
so has part: feature:163522-163646:-1:exon
so has part: feature:160540-160681:-1:exon
so has part: feature:159240-159336:-1:exon
so has part: feature:158339-158415:-1:exon
so has part: feature:154387-154482:-1:exon
so has part: feature:153639-153719:-1:exon
so has part: feature:153294-153392:-1:exon
so has part: feature:152849-152904:-1:exon
so has part: feature:151890-152003:-1:exon
so has part: feature:148381-148521:-1:exon
so has part: feature:147698-147752:-1:exon
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so has part: feature:141849-141990:-1:exon
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urn:…
SIO_000300: 1
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position:178807:-1
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urn:…
SIO_000300: 2
SIO_000628: feature:168613-168816:-1:exon

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urn:…
SIO_000300: 3
SIO_000628: feature:163522-163646:-1:exon

position:163522:-1
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position:163646:-1
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urn:…
SIO_000300: 4
SIO_000628: feature:160540-160681:-1:exon

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position:160681:-1
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urn:…
SIO_000300: 5
SIO_000628: feature:159240-159336:-1:exon

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urn:…
SIO_000300: 6
SIO_000628: feature:158339-158415:-1:exon

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position:158415:-1
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urn:…
SIO_000300: 7
SIO_000628: feature:154387-154482:-1:exon

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urn:…
SIO_000300: 8
SIO_000628: feature:153639-153719:-1:exon

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urn:…
SIO_000300: 9
SIO_000628: feature:153294-153392:-1:exon

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urn:…
SIO_000300: 10
SIO_000628: feature:152849-152904:-1:exon

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urn:…
SIO_000300: 11
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urn:…
SIO_000300: 12
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urn:…
SIO_000300: 13
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urn:…
SIO_000300: 14
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urn:…
SIO_000300: 15
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urn:…
SIO_000300: 16
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SIO_000300: 17
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SIO_000300: 18
SIO_000628: feature:141849-141990:-1:exon

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urn:…
SIO_000300: 19
SIO_000628: feature:141252-141378:-1:exon

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SIO_000300: 20
SIO_000628: feature:140665-140760:-1:exon

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urn:…
SIO_000300: 21
SIO_000628: feature:140283-140443:-1:exon

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urn:…
SIO_000300: 22
SIO_000628: feature:139206-139304:-1:exon

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SIO_000300: 23
SIO_000628: feature:135549-136790:-1:exon

position:136790:-1
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reference: sequence
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AP1G1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8869
gene: AP1G1
product: adaptor related protein complex 1 subunit gamma 1, transcript variant X6
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 112 long SRA reads, 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 12 samples with support for all annotated introns
transcript id: XM_040571681.1
SIO_010081: AP1G1
subclass of: SO_0000673
so part of: AP1G1
location: complement(join(135549..136790,139206..139304,140283..140443,140665..140760,141252..141378,141849..141990,144209..144313,144923..145050,145550..145639,145952..146074,147698..147752,148381..148521,151890..152003,152849..152904,153294..153392,153639..153719,154387..154482,158339..158415,159240..159336,160540..160681,163522..163646,168613..168816,178807..179052))
location: region:135549-179052:-1
so has part: feature:178807-179052:-1:exon
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so has part: feature:140283-140443:-1:exon
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position:179052:-1
position: 179052
reference: sequence
type: ReverseStrandPosition
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urn:…
SIO_000300: 1
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SIO_000300: 2
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SIO_000300: 3
SIO_000628: feature:163522-163646:-1:exon

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SIO_000300: 4
SIO_000628: feature:160540-160681:-1:exon

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SIO_000300: 5
SIO_000628: feature:159240-159336:-1:exon

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SIO_000300: 6
SIO_000628: feature:158339-158415:-1:exon

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SIO_000300: 7
SIO_000628: feature:154387-154482:-1:exon

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SIO_000300: 8
SIO_000628: feature:153639-153719:-1:exon

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SIO_000300: 9
SIO_000628: feature:153294-153392:-1:exon

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SIO_000300: 10
SIO_000628: feature:152849-152904:-1:exon

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SIO_000300: 11
SIO_000628: feature:151890-152003:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:148381-148521:-1:exon

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SIO_000300: 13
SIO_000628: feature:147698-147752:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:145952-146074:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:145550-145639:-1:exon

position:145639:-1
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reference: sequence
type: ReverseStrandPosition
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urn:…
SIO_000300: 16
SIO_000628: feature:144923-145050:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:144209-144313:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:141849-141990:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:141252-141378:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:140665-140760:-1:exon

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SIO_000300: 21
SIO_000628: feature:140283-140443:-1:exon

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SIO_000300: 22
SIO_000628: feature:139206-139304:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:135549-136790:-1:exon

AP1G1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8869
gene: AP1G1
product: adaptor related protein complex 1 subunit gamma 1, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 32 long SRA reads, 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 12 samples with support for all annotated introns
transcript id: XM_040571677.1
SIO_010081: AP1G1
subclass of: SO_0000673
so part of: AP1G1
location: complement(join(135549..136790,139206..139304,140283..140443,140665..140760,141252..141378,141849..141990,144209..144313,144923..145050,145550..145639,145952..146074,147698..147752,148381..148521,151890..152003,152849..152904,153294..153392,153639..153719,154387..154482,157150..157158,158339..158415,159240..159336,160540..160681,163522..163646,168613..168816,178807..179051))
location: region:135549-179051:-1
so has part: feature:178807-179051:-1:exon
so has part: feature:168613-168816:-1:exon
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so has part: feature:160540-160681:-1:exon
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position:179051:-1
position: 179051
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:178807-179051:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:168613-168816:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:163522-163646:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:160540-160681:-1:exon

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SIO_000300: 5
SIO_000628: feature:159240-159336:-1:exon

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SIO_000300: 6
SIO_000628: feature:158339-158415:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:157150-157158:-1:exon

position:157150:-1
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reference: sequence
type: ReverseStrandPosition
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position:157158:-1
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reference: sequence
type: ReverseStrandPosition
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urn:…
SIO_000300: 8
SIO_000628: feature:154387-154482:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:153639-153719:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:153294-153392:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:152849-152904:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:151890-152003:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:148381-148521:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:147698-147752:-1:exon

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SIO_000300: 15
SIO_000628: feature:145952-146074:-1:exon

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SIO_000300: 16
SIO_000628: feature:145550-145639:-1:exon

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SIO_000300: 17
SIO_000628: feature:144923-145050:-1:exon

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SIO_000300: 18
SIO_000628: feature:144209-144313:-1:exon

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SIO_000300: 19
SIO_000628: feature:141849-141990:-1:exon

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SIO_000300: 20
SIO_000628: feature:141252-141378:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:140665-140760:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:140283-140443:-1:exon

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SIO_000300: 23
SIO_000628: feature:139206-139304:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:135549-136790:-1:exon

AP1G1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8869
gene: AP1G1
product: adaptor related protein complex 1 subunit gamma 1, transcript variant X5
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 20 long SRA reads, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 6 samples with support for all annotated introns
transcript id: XM_040571680.1
SIO_010081: AP1G1
subclass of: SO_0000673
so part of: AP1G1
location: complement(join(135549..136790,139206..139304,140283..140443,140665..140760,141252..141378,141849..141990,144209..144313,144923..145050,145550..145636,145952..146074,147698..147752,148381..148521,151890..152003,152849..152904,153294..153392,153639..153719,154387..154482,158339..158415,159240..159336,160540..160681,163522..163646,168613..168816,173152..174622))
location: region:135549-174622:-1
so has part: feature:173152-174622:-1:exon
so has part: feature:168613-168816:-1:exon
so has part: feature:163522-163646:-1:exon
so has part: feature:160540-160681:-1:exon
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so has part: feature:141849-141990:-1:exon
so has part: feature:141252-141378:-1:exon
so has part: feature:140665-140760:-1:exon
so has part: feature:140283-140443:-1:exon
so has part: feature:139206-139304:-1:exon
so has part: feature:135549-136790:-1:exon

position:174622:-1
position: 174622
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:173152-174622:-1:exon

position:173152:-1
position: 173152
reference: sequence
type: ReverseStrandPosition
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urn:…
SIO_000300: 2
SIO_000628: feature:168613-168816:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:163522-163646:-1:exon

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SIO_000300: 4
SIO_000628: feature:160540-160681:-1:exon

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SIO_000300: 5
SIO_000628: feature:159240-159336:-1:exon

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SIO_000300: 6
SIO_000628: feature:158339-158415:-1:exon

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SIO_000300: 7
SIO_000628: feature:154387-154482:-1:exon

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SIO_000300: 8
SIO_000628: feature:153639-153719:-1:exon

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SIO_000300: 9
SIO_000628: feature:153294-153392:-1:exon

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SIO_000300: 10
SIO_000628: feature:152849-152904:-1:exon

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SIO_000300: 11
SIO_000628: feature:151890-152003:-1:exon

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SIO_000300: 12
SIO_000628: feature:148381-148521:-1:exon

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SIO_000300: 13
SIO_000628: feature:147698-147752:-1:exon

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SIO_000300: 14
SIO_000628: feature:145952-146074:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:145550-145636:-1:exon

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SIO_000300: 16
SIO_000628: feature:144923-145050:-1:exon

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SIO_000300: 17
SIO_000628: feature:144209-144313:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:141849-141990:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:141252-141378:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:140665-140760:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:140283-140443:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:139206-139304:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:135549-136790:-1:exon

AP1G1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8869
gene: AP1G1
product: adaptor related protein complex 1 subunit gamma 1, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 19 long SRA reads, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 6 samples with support for all annotated introns
transcript id: XM_040571676.1
SIO_010081: AP1G1
subclass of: SO_0000673
so part of: AP1G1
location: complement(join(135549..136790,139206..139304,140283..140443,140665..140760,141252..141378,141849..141990,144209..144313,144923..145050,145550..145636,145952..146074,147698..147752,148381..148521,151890..152003,152849..152904,153294..153392,153639..153719,154387..154482,157150..157158,158339..158415,159240..159336,160540..160681,163522..163646,168613..168816,173152..174621))
location: region:135549-174621:-1
so has part: feature:173152-174621:-1:exon
so has part: feature:168613-168816:-1:exon
so has part: feature:163522-163646:-1:exon
so has part: feature:160540-160681:-1:exon
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so has part: feature:158339-158415:-1:exon
so has part: feature:157150-157158:-1:exon
so has part: feature:154387-154482:-1:exon
so has part: feature:153639-153719:-1:exon
so has part: feature:153294-153392:-1:exon
so has part: feature:152849-152904:-1:exon
so has part: feature:151890-152003:-1:exon
so has part: feature:148381-148521:-1:exon
so has part: feature:147698-147752:-1:exon
so has part: feature:145952-146074:-1:exon
so has part: feature:145550-145636:-1:exon
so has part: feature:144923-145050:-1:exon
so has part: feature:144209-144313:-1:exon
so has part: feature:141849-141990:-1:exon
so has part: feature:141252-141378:-1:exon
so has part: feature:140665-140760:-1:exon
so has part: feature:140283-140443:-1:exon
so has part: feature:139206-139304:-1:exon
so has part: feature:135549-136790:-1:exon

position:174621:-1
position: 174621
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:173152-174621:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:168613-168816:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:163522-163646:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:160540-160681:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:159240-159336:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:158339-158415:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:157150-157158:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:154387-154482:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:153639-153719:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:153294-153392:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:152849-152904:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:151890-152003:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:148381-148521:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:147698-147752:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:145952-146074:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:145550-145636:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:144923-145050:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:144209-144313:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:141849-141990:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:141252-141378:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:140665-140760:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:140283-140443:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:139206-139304:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:135549-136790:-1:exon

AP1G1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8869
gene: AP1G1
product: adaptor related protein complex 1 subunit gamma 1, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 45 long SRA reads, 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 6 samples with support for all annotated introns
transcript id: XM_040571678.1
SIO_010081: AP1G1
subclass of: SO_0000673
so part of: AP1G1
location: complement(join(135549..136790,139206..139304,140283..140443,140665..140760,141252..141378,141849..141990,144209..144313,144923..145050,145550..145639,145952..146074,147698..147752,148381..148521,151890..152003,152849..152904,153294..153392,153639..153719,154387..154482,158339..158415,159240..159336,160540..160681,163522..163646,168613..168816,173152..174618))
location: region:135549-174618:-1
so has part: feature:173152-174618:-1:exon
so has part: feature:168613-168816:-1:exon
so has part: feature:163522-163646:-1:exon
so has part: feature:160540-160681:-1:exon
so has part: feature:159240-159336:-1:exon
so has part: feature:158339-158415:-1:exon
so has part: feature:154387-154482:-1:exon
so has part: feature:153639-153719:-1:exon
so has part: feature:153294-153392:-1:exon
so has part: feature:152849-152904:-1:exon
so has part: feature:151890-152003:-1:exon
so has part: feature:148381-148521:-1:exon
so has part: feature:147698-147752:-1:exon
so has part: feature:145952-146074:-1:exon
so has part: feature:145550-145639:-1:exon
so has part: feature:144923-145050:-1:exon
so has part: feature:144209-144313:-1:exon
so has part: feature:141849-141990:-1:exon
so has part: feature:141252-141378:-1:exon
so has part: feature:140665-140760:-1:exon
so has part: feature:140283-140443:-1:exon
so has part: feature:139206-139304:-1:exon
so has part: feature:135549-136790:-1:exon

position:174618:-1
position: 174618
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:173152-174618:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:168613-168816:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:163522-163646:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:160540-160681:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:159240-159336:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:158339-158415:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:154387-154482:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:153639-153719:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:153294-153392:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:152849-152904:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:151890-152003:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:148381-148521:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:147698-147752:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:145952-146074:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:145550-145639:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:144923-145050:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:144209-144313:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:141849-141990:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:141252-141378:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:140665-140760:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:140283-140443:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:139206-139304:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:135549-136790:-1:exon

AP1G1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8869
gene: AP1G1
product: adaptor related protein complex 1 subunit gamma 1, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 31 long SRA reads, 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 6 samples with support for all annotated introns
transcript id: XM_040571675.1
SIO_010081: AP1G1
subclass of: SO_0000673
so part of: AP1G1
location: complement(join(135549..136790,139206..139304,140283..140443,140665..140760,141252..141378,141849..141990,144209..144313,144923..145050,145550..145639,145952..146074,147698..147752,148381..148521,151890..152003,152849..152904,153294..153392,153639..153719,154387..154482,157150..157158,158339..158415,159240..159336,160540..160681,163522..163646,168613..168816,173152..174617))
location: region:135549-174617:-1
so has part: feature:173152-174617:-1:exon
so has part: feature:168613-168816:-1:exon
so has part: feature:163522-163646:-1:exon
so has part: feature:160540-160681:-1:exon
so has part: feature:159240-159336:-1:exon
so has part: feature:158339-158415:-1:exon
so has part: feature:157150-157158:-1:exon
so has part: feature:154387-154482:-1:exon
so has part: feature:153639-153719:-1:exon
so has part: feature:153294-153392:-1:exon
so has part: feature:152849-152904:-1:exon
so has part: feature:151890-152003:-1:exon
so has part: feature:148381-148521:-1:exon
so has part: feature:147698-147752:-1:exon
so has part: feature:145952-146074:-1:exon
so has part: feature:145550-145639:-1:exon
so has part: feature:144923-145050:-1:exon
so has part: feature:144209-144313:-1:exon
so has part: feature:141849-141990:-1:exon
so has part: feature:141252-141378:-1:exon
so has part: feature:140665-140760:-1:exon
so has part: feature:140283-140443:-1:exon
so has part: feature:139206-139304:-1:exon
so has part: feature:135549-136790:-1:exon

position:174617:-1
position: 174617
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:173152-174617:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:168613-168816:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:163522-163646:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:160540-160681:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:159240-159336:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:158339-158415:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:157150-157158:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:154387-154482:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:153639-153719:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:153294-153392:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:152849-152904:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:151890-152003:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:148381-148521:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:147698-147752:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:145952-146074:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:145550-145639:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:144923-145050:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:144209-144313:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:141849-141990:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:141252-141378:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:140665-140760:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:140283-140443:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:139206-139304:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:135549-136790:-1:exon

AP1G1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8869
gene: AP1G1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: AP-1 complex subunit gamma-1 isoform X5
translation: MRMPAPIRLRELIRTIRTARTQAEEREMIQKECAAIRSSFREEDNTYRCRNVAKLLYMHMLGYPAHFGQLECLKLIASQKFTDKRIGYLGAMLLLDERQDVHLLMTNCIKNDLNHSTQYVQGLALCTLGCMGSSEMCRDLAGEVEKLLKTSNSYLRKKAALCAVHVIRKVPELMEMFLPATKNLLNEKNHGVLHTSVVLLTEMCERSPDMLAHFRKLVPQLVRILKNLIMSGYSPEHDVSGISDPFLQVRILRLLRILGRNDDDSSEAMNDILAQVATNTETSKNVGNAILYETVLTIMDIKSESGLRVLAINILGRFLLNNDKNIRYVALTSLLKTVQTDHNAVQRHRSTIVDCLKDLDVSIKRRAMELSFALVNGNNVRGMMKELLYFLDSCEPEFKADCASGIFLAAEKYAPSKRWHIDTIMRVLTTAGSYVRDDAVPNLIQLITNSVEMHAYTVQRLYKAILGDYSQPLVQVASWCIGEYGDLLVSGQCEEEEPIQVTEDEVLDILESILISNMSASVTRGYALTAIMKLSTRFTCTVNRIKKVVSIYGSSIDVELQQRAVEYNALFKKYDHMRPALLERMPVMEKVTTNGPTEIVQTNGETEPAVLETKPPPSGLQPGSQANDLLDLLGGSDITPVIPTVPTSKPASAGGELLDLLGDLNLTGSPVPAPAPQISQPPFLLDGLPSQPLFNDIAAGIPSITAYNKNGLKIDFTFERSNTNPSVTVITIQASNSTELDMTDFVFQAAVPKTFQLQLLSPSSSVIPAFNSGTITQVIKVLNPQKQQLRMRIKLTYNHKGSAMQDLAEVNNFPPQSWQ
SIO_010081: AP1G1
subclass of: SO_0000673
so part of: AP1G1
location: complement(join(136689..136790,139206..139304,140283..140443,140665..140760,141252..141378,141849..141990,144209..144313,144923..145050,145550..145636,145952..146074,147698..147752,148381..148521,151890..152003,152849..152904,153294..153392,153639..153719,154387..154482,158339..158415,159240..159336,160540..160681,163522..163646,168613..168816,173152..173154))
location: region:136689-173154:-1
so has part: feature:173152-173154:-1:exon
so has part: feature:168613-168816:-1:exon
so has part: feature:163522-163646:-1:exon
so has part: feature:160540-160681:-1:exon
so has part: feature:159240-159336:-1:exon
so has part: feature:158339-158415:-1:exon
so has part: feature:154387-154482:-1:exon
so has part: feature:153639-153719:-1:exon
so has part: feature:153294-153392:-1:exon
so has part: feature:152849-152904:-1:exon
so has part: feature:151890-152003:-1:exon
so has part: feature:148381-148521:-1:exon
so has part: feature:147698-147752:-1:exon
so has part: feature:145952-146074:-1:exon
so has part: feature:145550-145636:-1:exon
so has part: feature:144923-145050:-1:exon
so has part: feature:144209-144313:-1:exon
so has part: feature:141849-141990:-1:exon
so has part: feature:141252-141378:-1:exon
so has part: feature:140665-140760:-1:exon
so has part: feature:140283-140443:-1:exon
so has part: feature:139206-139304:-1:exon
so has part: feature:136689-136790:-1:exon

XP_040427614.1
type: Protein
SIO_000068: ncbiprotein

position:136689:-1
position: 136689
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:173154:-1
position: 173154
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:173152-173154:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:168613-168816:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:163522-163646:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:160540-160681:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:159240-159336:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:158339-158415:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:154387-154482:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:153639-153719:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:153294-153392:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:152849-152904:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:151890-152003:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:148381-148521:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:147698-147752:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:145952-146074:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:145550-145636:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:144923-145050:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:144209-144313:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:141849-141990:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:141252-141378:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:140665-140760:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:140283-140443:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:139206-139304:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:136689-136790:-1:exon

AP1G1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8869
gene: AP1G1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: AP-1 complex subunit gamma-1 isoform X4
translation: MRMPAPIRLRELIRTIRTARTQAEEREMIQKECAAIRSSFREEDNTYRCRNVAKLLYMHMLGYPAHFGQLECLKLIASQKFTDKRIGYLGAMLLLDERQDVHLLMTNCIKNDLNHSTQYVQGLALCTLGCMGSSEMCRDLAGEVEKLLKTSNSYLRKKAALCAVHVIRKVPELMEMFLPATKNLLNEKNHGVLHTSVVLLTEMCERSPDMLAHFRKLVPQLVRILKNLIMSGYSPEHDVSGISDPFLQVRILRLLRILGRNDDDSSEAMNDILAQVATNTETSKNVGNAILYETVLTIMDIKSESGLRVLAINILGRFLLNNDKNIRYVALTSLLKTVQTDHNAVQRHRSTIVDCLKDLDVSIKRRAMELSFALVNGNNVRGMMKELLYFLDSCEPEFKADCASGIFLAAEKYAPSKRWHIDTIMRVLTTAGSYVRDDAVPNLIQLITNSVEMHAYTVQRLYKAILGDYSQQPLVQVASWCIGEYGDLLVSGQCEEEEPIQVTEDEVLDILESILISNMSASVTRGYALTAIMKLSTRFTCTVNRIKKVVSIYGSSIDVELQQRAVEYNALFKKYDHMRPALLERMPVMEKVTTNGPTEIVQTNGETEPAVLETKPPPSGLQPGSQANDLLDLLGGSDITPVIPTVPTSKPASAGGELLDLLGDLNLTGSPVPAPAPQISQPPFLLDGLPSQPLFNDIAAGIPSITAYNKNGLKIDFTFERSNTNPSVTVITIQASNSTELDMTDFVFQAAVPKTFQLQLLSPSSSVIPAFNSGTITQVIKVLNPQKQQLRMRIKLTYNHKGSAMQDLAEVNNFPPQSWQ
SIO_010081: AP1G1
subclass of: SO_0000673
so part of: AP1G1
location: complement(join(136689..136790,139206..139304,140283..140443,140665..140760,141252..141378,141849..141990,144209..144313,144923..145050,145550..145639,145952..146074,147698..147752,148381..148521,151890..152003,152849..152904,153294..153392,153639..153719,154387..154482,158339..158415,159240..159336,160540..160681,163522..163646,168613..168816,173152..173154))
location: region:136689-173154:-1
so has part: feature:173152-173154:-1:exon
so has part: feature:168613-168816:-1:exon
so has part: feature:163522-163646:-1:exon
so has part: feature:160540-160681:-1:exon
so has part: feature:159240-159336:-1:exon
so has part: feature:158339-158415:-1:exon
so has part: feature:154387-154482:-1:exon
so has part: feature:153639-153719:-1:exon
so has part: feature:153294-153392:-1:exon
so has part: feature:152849-152904:-1:exon
so has part: feature:151890-152003:-1:exon
so has part: feature:148381-148521:-1:exon
so has part: feature:147698-147752:-1:exon
so has part: feature:145952-146074:-1:exon
so has part: feature:145550-145639:-1:exon
so has part: feature:144923-145050:-1:exon
so has part: feature:144209-144313:-1:exon
so has part: feature:141849-141990:-1:exon
so has part: feature:141252-141378:-1:exon
so has part: feature:140665-140760:-1:exon
so has part: feature:140283-140443:-1:exon
so has part: feature:139206-139304:-1:exon
so has part: feature:136689-136790:-1:exon

XP_040427612.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:173152-173154:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:168613-168816:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:163522-163646:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:160540-160681:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:159240-159336:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:158339-158415:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:154387-154482:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:153639-153719:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:153294-153392:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:152849-152904:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:151890-152003:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:148381-148521:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:147698-147752:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:145952-146074:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:145550-145639:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:144923-145050:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:144209-144313:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:141849-141990:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:141252-141378:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:140665-140760:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:140283-140443:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:139206-139304:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:136689-136790:-1:exon

AP1G1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8869
gene: AP1G1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: AP-1 complex subunit gamma-1 isoform X2
translation: MRMPAPIRLRELIRTIRTARTQAEEREMIQKECAAIRSSFREEDNTYRCRNVAKLLYMHMLGYPAHFGQLECLKLIASQKFTDKRIGYLGAMLLLDERQDVHLLMTNCIKNDLNHSTQYVQGLALCTLGCMGSSEMCRDLAGEVEKLLKTSNSYLRKKAALCAVHVIRKVPELMEMFLPATKNLLNEKNHGVLHTSVVLLTEMCERSPDMLAHFRKNEKLVPQLVRILKNLIMSGYSPEHDVSGISDPFLQVRILRLLRILGRNDDDSSEAMNDILAQVATNTETSKNVGNAILYETVLTIMDIKSESGLRVLAINILGRFLLNNDKNIRYVALTSLLKTVQTDHNAVQRHRSTIVDCLKDLDVSIKRRAMELSFALVNGNNVRGMMKELLYFLDSCEPEFKADCASGIFLAAEKYAPSKRWHIDTIMRVLTTAGSYVRDDAVPNLIQLITNSVEMHAYTVQRLYKAILGDYSQPLVQVASWCIGEYGDLLVSGQCEEEEPIQVTEDEVLDILESILISNMSASVTRGYALTAIMKLSTRFTCTVNRIKKVVSIYGSSIDVELQQRAVEYNALFKKYDHMRPALLERMPVMEKVTTNGPTEIVQTNGETEPAVLETKPPPSGLQPGSQANDLLDLLGGSDITPVIPTVPTSKPASAGGELLDLLGDLNLTGSPVPAPAPQISQPPFLLDGLPSQPLFNDIAAGIPSITAYNKNGLKIDFTFERSNTNPSVTVITIQASNSTELDMTDFVFQAAVPKTFQLQLLSPSSSVIPAFNSGTITQVIKVLNPQKQQLRMRIKLTYNHKGSAMQDLAEVNNFPPQSWQ
SIO_010081: AP1G1
subclass of: SO_0000673
so part of: AP1G1
location: complement(join(136689..136790,139206..139304,140283..140443,140665..140760,141252..141378,141849..141990,144209..144313,144923..145050,145550..145636,145952..146074,147698..147752,148381..148521,151890..152003,152849..152904,153294..153392,153639..153719,154387..154482,157150..157158,158339..158415,159240..159336,160540..160681,163522..163646,168613..168816,173152..173154))
location: region:136689-173154:-1
so has part: feature:173152-173154:-1:exon
so has part: feature:168613-168816:-1:exon
so has part: feature:163522-163646:-1:exon
so has part: feature:160540-160681:-1:exon
so has part: feature:159240-159336:-1:exon
so has part: feature:158339-158415:-1:exon
so has part: feature:157150-157158:-1:exon
so has part: feature:154387-154482:-1:exon
so has part: feature:153639-153719:-1:exon
so has part: feature:153294-153392:-1:exon
so has part: feature:152849-152904:-1:exon
so has part: feature:151890-152003:-1:exon
so has part: feature:148381-148521:-1:exon
so has part: feature:147698-147752:-1:exon
so has part: feature:145952-146074:-1:exon
so has part: feature:145550-145636:-1:exon
so has part: feature:144923-145050:-1:exon
so has part: feature:144209-144313:-1:exon
so has part: feature:141849-141990:-1:exon
so has part: feature:141252-141378:-1:exon
so has part: feature:140665-140760:-1:exon
so has part: feature:140283-140443:-1:exon
so has part: feature:139206-139304:-1:exon
so has part: feature:136689-136790:-1:exon

XP_040427610.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:173152-173154:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:168613-168816:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:163522-163646:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:160540-160681:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:159240-159336:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:158339-158415:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:157150-157158:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:154387-154482:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:153639-153719:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:153294-153392:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:152849-152904:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:151890-152003:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:148381-148521:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:147698-147752:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:145952-146074:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:145550-145636:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:144923-145050:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:144209-144313:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:141849-141990:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:141252-141378:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:140665-140760:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:140283-140443:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:139206-139304:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:136689-136790:-1:exon

AP1G1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8869
gene: AP1G1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: AP-1 complex subunit gamma-1 isoform X1
translation: MRMPAPIRLRELIRTIRTARTQAEEREMIQKECAAIRSSFREEDNTYRCRNVAKLLYMHMLGYPAHFGQLECLKLIASQKFTDKRIGYLGAMLLLDERQDVHLLMTNCIKNDLNHSTQYVQGLALCTLGCMGSSEMCRDLAGEVEKLLKTSNSYLRKKAALCAVHVIRKVPELMEMFLPATKNLLNEKNHGVLHTSVVLLTEMCERSPDMLAHFRKNEKLVPQLVRILKNLIMSGYSPEHDVSGISDPFLQVRILRLLRILGRNDDDSSEAMNDILAQVATNTETSKNVGNAILYETVLTIMDIKSESGLRVLAINILGRFLLNNDKNIRYVALTSLLKTVQTDHNAVQRHRSTIVDCLKDLDVSIKRRAMELSFALVNGNNVRGMMKELLYFLDSCEPEFKADCASGIFLAAEKYAPSKRWHIDTIMRVLTTAGSYVRDDAVPNLIQLITNSVEMHAYTVQRLYKAILGDYSQQPLVQVASWCIGEYGDLLVSGQCEEEEPIQVTEDEVLDILESILISNMSASVTRGYALTAIMKLSTRFTCTVNRIKKVVSIYGSSIDVELQQRAVEYNALFKKYDHMRPALLERMPVMEKVTTNGPTEIVQTNGETEPAVLETKPPPSGLQPGSQANDLLDLLGGSDITPVIPTVPTSKPASAGGELLDLLGDLNLTGSPVPAPAPQISQPPFLLDGLPSQPLFNDIAAGIPSITAYNKNGLKIDFTFERSNTNPSVTVITIQASNSTELDMTDFVFQAAVPKTFQLQLLSPSSSVIPAFNSGTITQVIKVLNPQKQQLRMRIKLTYNHKGSAMQDLAEVNNFPPQSWQ
SIO_010081: AP1G1
subclass of: SO_0000673
so part of: AP1G1
location: complement(join(136689..136790,139206..139304,140283..140443,140665..140760,141252..141378,141849..141990,144209..144313,144923..145050,145550..145639,145952..146074,147698..147752,148381..148521,151890..152003,152849..152904,153294..153392,153639..153719,154387..154482,157150..157158,158339..158415,159240..159336,160540..160681,163522..163646,168613..168816,173152..173154))
location: region:136689-173154:-1
so has part: feature:173152-173154:-1:exon
so has part: feature:168613-168816:-1:exon
so has part: feature:163522-163646:-1:exon
so has part: feature:160540-160681:-1:exon
so has part: feature:159240-159336:-1:exon
so has part: feature:158339-158415:-1:exon
so has part: feature:157150-157158:-1:exon
so has part: feature:154387-154482:-1:exon
so has part: feature:153639-153719:-1:exon
so has part: feature:153294-153392:-1:exon
so has part: feature:152849-152904:-1:exon
so has part: feature:151890-152003:-1:exon
so has part: feature:148381-148521:-1:exon
so has part: feature:147698-147752:-1:exon
so has part: feature:145952-146074:-1:exon
so has part: feature:145550-145639:-1:exon
so has part: feature:144923-145050:-1:exon
so has part: feature:144209-144313:-1:exon
so has part: feature:141849-141990:-1:exon
so has part: feature:141252-141378:-1:exon
so has part: feature:140665-140760:-1:exon
so has part: feature:140283-140443:-1:exon
so has part: feature:139206-139304:-1:exon
so has part: feature:136689-136790:-1:exon

XP_040427609.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:173152-173154:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:168613-168816:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:163522-163646:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:160540-160681:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:159240-159336:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:158339-158415:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:157150-157158:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:154387-154482:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:153639-153719:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:153294-153392:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:152849-152904:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:151890-152003:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:148381-148521:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:147698-147752:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:145952-146074:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:145550-145639:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:144923-145050:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:144209-144313:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:141849-141990:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:141252-141378:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:140665-140760:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:140283-140443:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:139206-139304:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:136689-136790:-1:exon

AP1G1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8869
gene: AP1G1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: AP-1 complex subunit gamma-1 isoform X7
translation: MPAPIRLRELIRTIRTARTQAEEREMIQKECAAIRSSFREEDNTYRCRNVAKLLYMHMLGYPAHFGQLECLKLIASQKFTDKRIGYLGAMLLLDERQDVHLLMTNCIKNDLNHSTQYVQGLALCTLGCMGSSEMCRDLAGEVEKLLKTSNSYLRKKAALCAVHVIRKVPELMEMFLPATKNLLNEKNHGVLHTSVVLLTEMCERSPDMLAHFRKLVPQLVRILKNLIMSGYSPEHDVSGISDPFLQVRILRLLRILGRNDDDSSEAMNDILAQVATNTETSKNVGNAILYETVLTIMDIKSESGLRVLAINILGRFLLNNDKNIRYVALTSLLKTVQTDHNAVQRHRSTIVDCLKDLDVSIKRRAMELSFALVNGNNVRGMMKELLYFLDSCEPEFKADCASGIFLAAEKYAPSKRWHIDTIMRVLTTAGSYVRDDAVPNLIQLITNSVEMHAYTVQRLYKAILGDYSQPLVQVASWCIGEYGDLLVSGQCEEEEPIQVTEDEVLDILESILISNMSASVTRGYALTAIMKLSTRFTCTVNRIKKVVSIYGSSIDVELQQRAVEYNALFKKYDHMRPALLERMPVMEKVTTNGPTEIVQTNGETEPAVLETKPPPSGLQPGSQANDLLDLLGGSDITPVIPTVPTSKPASAGGELLDLLGDLNLTGSPVPAPAPQISQPPFLLDGLPSQPLFNDIAAGIPSITAYNKNGLKIDFTFERSNTNPSVTVITIQASNSTELDMTDFVFQAAVPKTFQLQLLSPSSSVIPAFNSGTITQVIKVLNPQKQQLRMRIKLTYNHKGSAMQDLAEVNNFPPQSWQ
SIO_010081: AP1G1
subclass of: SO_0000673
so part of: AP1G1
location: complement(join(136689..136790,139206..139304,140283..140443,140665..140760,141252..141378,141849..141990,144209..144313,144923..145050,145550..145636,145952..146074,147698..147752,148381..148521,151890..152003,152849..152904,153294..153392,153639..153719,154387..154482,158339..158415,159240..159336,160540..160681,163522..163646,168613..168813))
location: region:136689-168813:-1
so has part: feature:168613-168813:-1:exon
so has part: feature:163522-163646:-1:exon
so has part: feature:160540-160681:-1:exon
so has part: feature:159240-159336:-1:exon
so has part: feature:158339-158415:-1:exon
so has part: feature:154387-154482:-1:exon
so has part: feature:153639-153719:-1:exon
so has part: feature:153294-153392:-1:exon
so has part: feature:152849-152904:-1:exon
so has part: feature:151890-152003:-1:exon
so has part: feature:148381-148521:-1:exon
so has part: feature:147698-147752:-1:exon
so has part: feature:145952-146074:-1:exon
so has part: feature:145550-145636:-1:exon
so has part: feature:144923-145050:-1:exon
so has part: feature:144209-144313:-1:exon
so has part: feature:141849-141990:-1:exon
so has part: feature:141252-141378:-1:exon
so has part: feature:140665-140760:-1:exon
so has part: feature:140283-140443:-1:exon
so has part: feature:139206-139304:-1:exon
so has part: feature:136689-136790:-1:exon

XP_040427616.1
type: Protein
SIO_000068: ncbiprotein

position:168813:-1
position: 168813
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:168613-168813:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:163522-163646:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:160540-160681:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:159240-159336:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:158339-158415:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:154387-154482:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:153639-153719:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:153294-153392:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:152849-152904:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:151890-152003:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:148381-148521:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:147698-147752:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:145952-146074:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:145550-145636:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:144923-145050:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:144209-144313:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:141849-141990:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:141252-141378:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:140665-140760:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:140283-140443:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:139206-139304:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:136689-136790:-1:exon

AP1G1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8869
gene: AP1G1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: AP-1 complex subunit gamma-1 isoform X6
translation: MPAPIRLRELIRTIRTARTQAEEREMIQKECAAIRSSFREEDNTYRCRNVAKLLYMHMLGYPAHFGQLECLKLIASQKFTDKRIGYLGAMLLLDERQDVHLLMTNCIKNDLNHSTQYVQGLALCTLGCMGSSEMCRDLAGEVEKLLKTSNSYLRKKAALCAVHVIRKVPELMEMFLPATKNLLNEKNHGVLHTSVVLLTEMCERSPDMLAHFRKLVPQLVRILKNLIMSGYSPEHDVSGISDPFLQVRILRLLRILGRNDDDSSEAMNDILAQVATNTETSKNVGNAILYETVLTIMDIKSESGLRVLAINILGRFLLNNDKNIRYVALTSLLKTVQTDHNAVQRHRSTIVDCLKDLDVSIKRRAMELSFALVNGNNVRGMMKELLYFLDSCEPEFKADCASGIFLAAEKYAPSKRWHIDTIMRVLTTAGSYVRDDAVPNLIQLITNSVEMHAYTVQRLYKAILGDYSQQPLVQVASWCIGEYGDLLVSGQCEEEEPIQVTEDEVLDILESILISNMSASVTRGYALTAIMKLSTRFTCTVNRIKKVVSIYGSSIDVELQQRAVEYNALFKKYDHMRPALLERMPVMEKVTTNGPTEIVQTNGETEPAVLETKPPPSGLQPGSQANDLLDLLGGSDITPVIPTVPTSKPASAGGELLDLLGDLNLTGSPVPAPAPQISQPPFLLDGLPSQPLFNDIAAGIPSITAYNKNGLKIDFTFERSNTNPSVTVITIQASNSTELDMTDFVFQAAVPKTFQLQLLSPSSSVIPAFNSGTITQVIKVLNPQKQQLRMRIKLTYNHKGSAMQDLAEVNNFPPQSWQ
SIO_010081: AP1G1
subclass of: SO_0000673
so part of: AP1G1
location: complement(join(136689..136790,139206..139304,140283..140443,140665..140760,141252..141378,141849..141990,144209..144313,144923..145050,145550..145639,145952..146074,147698..147752,148381..148521,151890..152003,152849..152904,153294..153392,153639..153719,154387..154482,158339..158415,159240..159336,160540..160681,163522..163646,168613..168813))
location: region:136689-168813:-1
so has part: feature:168613-168813:-1:exon
so has part: feature:163522-163646:-1:exon
so has part: feature:160540-160681:-1:exon
so has part: feature:159240-159336:-1:exon
so has part: feature:158339-158415:-1:exon
so has part: feature:154387-154482:-1:exon
so has part: feature:153639-153719:-1:exon
so has part: feature:153294-153392:-1:exon
so has part: feature:152849-152904:-1:exon
so has part: feature:151890-152003:-1:exon
so has part: feature:148381-148521:-1:exon
so has part: feature:147698-147752:-1:exon
so has part: feature:145952-146074:-1:exon
so has part: feature:145550-145639:-1:exon
so has part: feature:144923-145050:-1:exon
so has part: feature:144209-144313:-1:exon
so has part: feature:141849-141990:-1:exon
so has part: feature:141252-141378:-1:exon
so has part: feature:140665-140760:-1:exon
so has part: feature:140283-140443:-1:exon
so has part: feature:139206-139304:-1:exon
so has part: feature:136689-136790:-1:exon

XP_040427615.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:168613-168813:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:163522-163646:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:160540-160681:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:159240-159336:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:158339-158415:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:154387-154482:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:153639-153719:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:153294-153392:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:152849-152904:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:151890-152003:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:148381-148521:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:147698-147752:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:145952-146074:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:145550-145639:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:144923-145050:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:144209-144313:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:141849-141990:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:141252-141378:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:140665-140760:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:140283-140443:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:139206-139304:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:136689-136790:-1:exon

AP1G1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8869
gene: AP1G1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: AP-1 complex subunit gamma-1 isoform X3
translation: MPAPIRLRELIRTIRTARTQAEEREMIQKECAAIRSSFREEDNTYRCRNVAKLLYMHMLGYPAHFGQLECLKLIASQKFTDKRIGYLGAMLLLDERQDVHLLMTNCIKNDLNHSTQYVQGLALCTLGCMGSSEMCRDLAGEVEKLLKTSNSYLRKKAALCAVHVIRKVPELMEMFLPATKNLLNEKNHGVLHTSVVLLTEMCERSPDMLAHFRKNEKLVPQLVRILKNLIMSGYSPEHDVSGISDPFLQVRILRLLRILGRNDDDSSEAMNDILAQVATNTETSKNVGNAILYETVLTIMDIKSESGLRVLAINILGRFLLNNDKNIRYVALTSLLKTVQTDHNAVQRHRSTIVDCLKDLDVSIKRRAMELSFALVNGNNVRGMMKELLYFLDSCEPEFKADCASGIFLAAEKYAPSKRWHIDTIMRVLTTAGSYVRDDAVPNLIQLITNSVEMHAYTVQRLYKAILGDYSQQPLVQVASWCIGEYGDLLVSGQCEEEEPIQVTEDEVLDILESILISNMSASVTRGYALTAIMKLSTRFTCTVNRIKKVVSIYGSSIDVELQQRAVEYNALFKKYDHMRPALLERMPVMEKVTTNGPTEIVQTNGETEPAVLETKPPPSGLQPGSQANDLLDLLGGSDITPVIPTVPTSKPASAGGELLDLLGDLNLTGSPVPAPAPQISQPPFLLDGLPSQPLFNDIAAGIPSITAYNKNGLKIDFTFERSNTNPSVTVITIQASNSTELDMTDFVFQAAVPKTFQLQLLSPSSSVIPAFNSGTITQVIKVLNPQKQQLRMRIKLTYNHKGSAMQDLAEVNNFPPQSWQ
SIO_010081: AP1G1
subclass of: SO_0000673
so part of: AP1G1
location: complement(join(136689..136790,139206..139304,140283..140443,140665..140760,141252..141378,141849..141990,144209..144313,144923..145050,145550..145639,145952..146074,147698..147752,148381..148521,151890..152003,152849..152904,153294..153392,153639..153719,154387..154482,157150..157158,158339..158415,159240..159336,160540..160681,163522..163646,168613..168813))
location: region:136689-168813:-1
so has part: feature:168613-168813:-1:exon
so has part: feature:163522-163646:-1:exon
so has part: feature:160540-160681:-1:exon
so has part: feature:159240-159336:-1:exon
so has part: feature:158339-158415:-1:exon
so has part: feature:157150-157158:-1:exon
so has part: feature:154387-154482:-1:exon
so has part: feature:153639-153719:-1:exon
so has part: feature:153294-153392:-1:exon
so has part: feature:152849-152904:-1:exon
so has part: feature:151890-152003:-1:exon
so has part: feature:148381-148521:-1:exon
so has part: feature:147698-147752:-1:exon
so has part: feature:145952-146074:-1:exon
so has part: feature:145550-145639:-1:exon
so has part: feature:144923-145050:-1:exon
so has part: feature:144209-144313:-1:exon
so has part: feature:141849-141990:-1:exon
so has part: feature:141252-141378:-1:exon
so has part: feature:140665-140760:-1:exon
so has part: feature:140283-140443:-1:exon
so has part: feature:139206-139304:-1:exon
so has part: feature:136689-136790:-1:exon

XP_040427611.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:168613-168813:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:163522-163646:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:160540-160681:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:159240-159336:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:158339-158415:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:157150-157158:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:154387-154482:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:153639-153719:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:153294-153392:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:152849-152904:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:151890-152003:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:148381-148521:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:147698-147752:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:145952-146074:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:145550-145639:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:144923-145050:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:144209-144313:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:141849-141990:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:141252-141378:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:140665-140760:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:140283-140443:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:139206-139304:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:136689-136790:-1:exon

LOC121077022
type: Gene
subclass of: SO_0000704
RO_0002162: 8869
gene: LOC121077022
note: Derived by automated computational analysis using gene prediction method: cmsearch.
so part of: sequence
location: complement(150443..150529)
location: region:150443-150529:-1
so has part: feature:150443-150529:-1:exon
subclass of: SO_0000578

121077022
type: Gene
SIO_000068: ncbigene

position:150443:-1
position: 150443
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:150529:-1
position: 150529
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:150443-150529:-1:exon

LOC121077022
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 8869
nc RNA class: snoRNA
gene: LOC121077022
product: small nucleolar RNA SNORD71
inference: COORDINATES: nucleotide motif:Rfam:12.0:RF00576
inference: COORDINATES: profile:INFERNAL:1.1.1
note: Derived by automated computational analysis using gene prediction method: cmsearch.
transcript id: XR_005823871.1
SIO_010081: LOC121077022
subclass of: SO_0000673
so part of: LOC121077022
location: complement(150443..150529)
location: region:150443-150529:-1
so has part: feature:150443-150529:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:150443-150529:-1:exon

ATXN1L
type: Gene
subclass of: SO_0000704
RO_0002162: 8869
gene: ATXN1L
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 180346..187541
location: region:180346-187541:1
so has part: feature:180346-187541:1:exon
subclass of: SO_0000010

121076980
type: Gene
SIO_000068: ncbigene

position:180346:1
position: 180346
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:187541:1
position: 187541
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:180346-187541:1:exon

ATXN1L
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8869
gene: ATXN1L
product: ataxin 1 like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 14 long SRA reads, 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 6 samples with support for all annotated introns
transcript id: XM_040571685.1
SIO_010081: ATXN1L
subclass of: SO_0000673
so part of: ATXN1L
location: join(180346..180412,180679..187541)
location: region:180346-187541:1
so has part: feature:180346-180412:1:exon
so has part: feature:180679-187541:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:180346-180412:1:exon

position:180412:1
position: 180412
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:180679-187541:1:exon

position:180679:1
position: 180679
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

ATXN1L
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8869
gene: ATXN1L
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: ataxin-1-like
translation: MRAGHERSQECLPPKKRELPAASTGTEAARAGGAQASGEGPEWARTAGPGPAALRYGPGEAAEAVAGLTVDQYGMLYKVAVPPATFSPTALHPVVNVSPLTPAFNVTSPIIQHPGVPYPPVHYTQIPPTSLQLISSHYTVPYAVPPGFLPSPLLSPSTNLTASHVPHFVPYASLFTEEAAPSPQTTSPTHTFNKSASAVSPSGQMQHHAGTQPLDTALGRIPVYYQMSRLPPGYSAYETPTAGGSPDSPQQDSQLSSEVAAANGGQRHLEHNVVRRTSEAVDSGSSKAEDCLPGAAVGCVVDGQFLSGYQTLRTEVSVPAHRNTPDTDLEVQRVVGVLASQDYHVLAAQRKDDPSPLNLCHSIPDQQGESKDVLRNTVERAAAGKSQSRSPYIVSPEEMVRQRQLTKGMVIANGKPVLVPVGSEPIRSSASETLVRQSPDVQARGSVLEKDLAQLQPPSSSHLPSHFMKGAIIQLATGELKRVEDLQTQDFVRSAEVSGGLKIDSSTVVDIQESQWPGLVMLHFVVGEQQSKVSIDVPPEHPFFVYGQGWSSCSPGRTAQLFALPCHRLQVGDVCISISLQSMNGNSASQANYPLTDQLISTRERSERTAQGSREPSDGAAERKSQPERESAAQSSHAEPSQPETVTQHSWAAPGFQRYSTQAEEPRPSLLRPSFIPQEVKLSIEGRSNAGK
SIO_010081: ATXN1L
subclass of: SO_0000673
so part of: ATXN1L
location: 180789..182867
location: region:180789-182867:1
so has part: feature:180789-182867:1:exon

XP_040427619.1
type: Protein
SIO_000068: ncbiprotein

position:180789:1
position: 180789
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:182867:1
position: 182867
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:180789-182867:1:exon

ZNF821
type: Gene
subclass of: SO_0000704
RO_0002162: 8869
gene: ZNF821
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(188961..202738)
location: region:188961-202738:-1
so has part: feature:188961-202738:-1:exon
subclass of: SO_0000010

121076982
type: Gene
SIO_000068: ncbigene

position:188961:-1
position: 188961
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:202738:-1
position: 202738
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:188961-202738:-1:exon

ZNF821
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8869
gene: ZNF821
product: zinc finger protein 821, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 long SRA reads, 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
transcript id: XM_040571691.1
SIO_010081: ZNF821
subclass of: SO_0000673
so part of: ZNF821
location: complement(join(188961..189865,190575..190741,191668..191772,192340..192482,192998..193123,200919..201010,202720..202738))
location: region:188961-202738:-1
so has part: feature:202720-202738:-1:exon
so has part: feature:200919-201010:-1:exon
so has part: feature:192998-193123:-1:exon
so has part: feature:192340-192482:-1:exon
so has part: feature:191668-191772:-1:exon
so has part: feature:190575-190741:-1:exon
so has part: feature:188961-189865:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:202720-202738:-1:exon

position:202720:-1
position: 202720
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:200919-201010:-1:exon

position:200919:-1
position: 200919
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:201010:-1
position: 201010
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:192998-193123:-1:exon

position:192998:-1
position: 192998
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:193123:-1
position: 193123
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:192340-192482:-1:exon

position:192340:-1
position: 192340
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:192482:-1
position: 192482
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:191668-191772:-1:exon

position:191668:-1
position: 191668
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:191772:-1
position: 191772
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:190575-190741:-1:exon

position:190575:-1
position: 190575
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:190741:-1
position: 190741
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:188961-189865:-1:exon

position:189865:-1
position: 189865
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

ZNF821
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8869
gene: ZNF821
product: zinc finger protein 821, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 long SRA reads, 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 8 samples with support for all annotated introns
transcript id: XM_040571689.1
SIO_010081: ZNF821
subclass of: SO_0000673
so part of: ZNF821
location: complement(join(188961..189865,190575..190741,191668..191772,192340..192482,192998..193123,200919..201010,202337..202467))
location: region:188961-202467:-1
so has part: feature:202337-202467:-1:exon
so has part: feature:200919-201010:-1:exon
so has part: feature:192998-193123:-1:exon
so has part: feature:192340-192482:-1:exon
so has part: feature:191668-191772:-1:exon
so has part: feature:190575-190741:-1:exon
so has part: feature:188961-189865:-1:exon

position:202467:-1
position: 202467
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:202337-202467:-1:exon

position:202337:-1
position: 202337
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:200919-201010:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:192998-193123:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:192340-192482:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:191668-191772:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:190575-190741:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:188961-189865:-1:exon

ZNF821
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8869
gene: ZNF821
product: zinc finger protein 821, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 long SRA reads, 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
transcript id: XM_040571692.1
SIO_010081: ZNF821
subclass of: SO_0000673
so part of: ZNF821
location: complement(join(188961..189865,190575..190741,191668..191772,192340..192482,192998..193123,202337..202355))
location: region:188961-202355:-1
so has part: feature:202337-202355:-1:exon
so has part: feature:192998-193123:-1:exon
so has part: feature:192340-192482:-1:exon
so has part: feature:191668-191772:-1:exon
so has part: feature:190575-190741:-1:exon
so has part: feature:188961-189865:-1:exon

position:202355:-1
position: 202355
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:202337-202355:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:192998-193123:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:192340-192482:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:191668-191772:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:190575-190741:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:188961-189865:-1:exon

ZNF821
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8869
gene: ZNF821
product: zinc finger protein 821, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 long SRA reads, 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 6 samples with support for all annotated introns
transcript id: XM_040571690.1
SIO_010081: ZNF821
subclass of: SO_0000673
so part of: ZNF821
location: complement(join(188961..189865,190575..190741,191668..191772,192340..192482,192998..193123,200919..201010,202164..202290))
location: region:188961-202290:-1
so has part: feature:202164-202290:-1:exon
so has part: feature:200919-201010:-1:exon
so has part: feature:192998-193123:-1:exon
so has part: feature:192340-192482:-1:exon
so has part: feature:191668-191772:-1:exon
so has part: feature:190575-190741:-1:exon
so has part: feature:188961-189865:-1:exon

position:202290:-1
position: 202290
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:202164-202290:-1:exon

position:202164:-1
position: 202164
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:200919-201010:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:192998-193123:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:192340-192482:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:191668-191772:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:190575-190741:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:188961-189865:-1:exon

ZNF821
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8869
gene: ZNF821
product: zinc finger protein 821, transcript variant X5
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 long SRA read, 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XM_040571693.1
SIO_010081: ZNF821
subclass of: SO_0000673
so part of: ZNF821
location: complement(join(188961..189865,190575..190741,192340..192482,192998..193123,200919..201667))
location: region:188961-201667:-1
so has part: feature:200919-201667:-1:exon
so has part: feature:192998-193123:-1:exon
so has part: feature:192340-192482:-1:exon
so has part: feature:190575-190741:-1:exon
so has part: feature:188961-189865:-1:exon

position:201667:-1
position: 201667
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:200919-201667:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:192998-193123:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:192340-192482:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:190575-190741:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:188961-189865:-1:exon

ZNF821
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8869
gene: ZNF821
product: zinc finger protein 821, transcript variant X6
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 long SRA read, 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 11 samples with support for all annotated introns
transcript id: XM_040571694.1
SIO_010081: ZNF821
subclass of: SO_0000673
so part of: ZNF821
location: complement(join(188961..189865,190575..190741,191668..191772,192340..192482,192968..193103))
location: region:188961-193103:-1
so has part: feature:192968-193103:-1:exon
so has part: feature:192340-192482:-1:exon
so has part: feature:191668-191772:-1:exon
so has part: feature:190575-190741:-1:exon
so has part: feature:188961-189865:-1:exon

position:193103:-1
position: 193103
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:192968-193103:-1:exon

position:192968:-1
position: 192968
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:192340-192482:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:191668-191772:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:190575-190741:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:188961-189865:-1:exon

ZNF821
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8869
gene: ZNF821
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: zinc finger protein 821 isoform X3
translation: MSRRKQTTPNKVHWEQVFAGLEEQARQAMMKNSFPGPLGDQRPAIHPLQDHDSSSSGSDDDETTQDEVSSHTSEEDGSMIKVKKELENAEKPAAGTPLMRDNEHTAAVVSAKSYMCPVCGRALSSPGSLGRHLLIHSEDQLSNCAVCGARFTSHATFNSEKLPEVLSADRLPAPQSEGPSSVEGKDIAFHTPVYPASILLVCNNCAAYRKLLEAQTPGMRKWALRRQNEPLEVRLQRLERERTAKKSRRDNETPEEREVRRMRDREAKRLQRMQETDEQRARRLQRDREAMRLKRANETPEKRQARLIREREAKRLKRRLEKMDMMLRAQFGQDPSAMAALAAEMNFFQLPVSNVELESQLLGKMTFEEQSNSTLH
SIO_010081: ZNF821
subclass of: SO_0000673
so part of: ZNF821
location: complement(join(189211..189865,190575..190741,192340..192482,192998..193123,200919..200958))
location: region:189211-200958:-1
so has part: feature:200919-200958:-1:exon
so has part: feature:192998-193123:-1:exon
so has part: feature:192340-192482:-1:exon
so has part: feature:190575-190741:-1:exon
so has part: feature:189211-189865:-1:exon

XP_040427627.1
type: Protein
SIO_000068: ncbiprotein

position:189211:-1
position: 189211
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:200958:-1
position: 200958
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:200919-200958:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:192998-193123:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:192340-192482:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:190575-190741:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:189211-189865:-1:exon

ZNF821
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8869
gene: ZNF821
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: zinc finger protein 821 isoform X1
translation: MSRRKQTTPNKVHWEQVFAGLEEQARQAMMKNSFPGPLGDQRPAIHPLQDHDSSSSGSDDDETTQDEVSSHTSEEDGSMIKVKKELENAEKPAAGTPLMRDNEVPESLNADPMLGLSQCPLCQLECGSREQLIAHVYQHTAAVVSAKSYMCPVCGRALSSPGSLGRHLLIHSEDQLSNCAVCGARFTSHATFNSEKLPEVLSADRLPAPQSEGPSSVEGKDIAFHTPVYPASILLVCNNCAAYRKLLEAQTPGMRKWALRRQNEPLEVRLQRLERERTAKKSRRDNETPEEREVRRMRDREAKRLQRMQETDEQRARRLQRDREAMRLKRANETPEKRQARLIREREAKRLKRRLEKMDMMLRAQFGQDPSAMAALAAEMNFFQLPVSNVELESQLLGKMTFEEQSNSTLH
SIO_010081: ZNF821
subclass of: SO_0000673
so part of: ZNF821
location: complement(join(189211..189865,190575..190741,191668..191772,192340..192482,192998..193123,200919..200958))
location: region:189211-200958:-1
so has part: feature:200919-200958:-1:exon
so has part: feature:192998-193123:-1:exon
so has part: feature:192340-192482:-1:exon
so has part: feature:191668-191772:-1:exon
so has part: feature:190575-190741:-1:exon
so has part: feature:189211-189865:-1:exon

XP_040427623.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:200919-200958:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:192998-193123:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:192340-192482:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:191668-191772:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:190575-190741:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:189211-189865:-1:exon

ZNF821
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8869
gene: ZNF821
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: zinc finger protein 821 isoform X1
translation: MSRRKQTTPNKVHWEQVFAGLEEQARQAMMKNSFPGPLGDQRPAIHPLQDHDSSSSGSDDDETTQDEVSSHTSEEDGSMIKVKKELENAEKPAAGTPLMRDNEVPESLNADPMLGLSQCPLCQLECGSREQLIAHVYQHTAAVVSAKSYMCPVCGRALSSPGSLGRHLLIHSEDQLSNCAVCGARFTSHATFNSEKLPEVLSADRLPAPQSEGPSSVEGKDIAFHTPVYPASILLVCNNCAAYRKLLEAQTPGMRKWALRRQNEPLEVRLQRLERERTAKKSRRDNETPEEREVRRMRDREAKRLQRMQETDEQRARRLQRDREAMRLKRANETPEKRQARLIREREAKRLKRRLEKMDMMLRAQFGQDPSAMAALAAEMNFFQLPVSNVELESQLLGKMTFEEQSNSTLH
SIO_010081: ZNF821
subclass of: SO_0000673
so part of: ZNF821
location: complement(join(189211..189865,190575..190741,191668..191772,192340..192482,192998..193123,200919..200958))
location: region:189211-200958:-1
so has part: feature:200919-200958:-1:exon
so has part: feature:192998-193123:-1:exon
so has part: feature:192340-192482:-1:exon
so has part: feature:191668-191772:-1:exon
so has part: feature:190575-190741:-1:exon
so has part: feature:189211-189865:-1:exon

XP_040427624.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:200919-200958:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:192998-193123:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:192340-192482:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:191668-191772:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:190575-190741:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:189211-189865:-1:exon

ZNF821
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8869
gene: ZNF821
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: zinc finger protein 821 isoform X1
translation: MSRRKQTTPNKVHWEQVFAGLEEQARQAMMKNSFPGPLGDQRPAIHPLQDHDSSSSGSDDDETTQDEVSSHTSEEDGSMIKVKKELENAEKPAAGTPLMRDNEVPESLNADPMLGLSQCPLCQLECGSREQLIAHVYQHTAAVVSAKSYMCPVCGRALSSPGSLGRHLLIHSEDQLSNCAVCGARFTSHATFNSEKLPEVLSADRLPAPQSEGPSSVEGKDIAFHTPVYPASILLVCNNCAAYRKLLEAQTPGMRKWALRRQNEPLEVRLQRLERERTAKKSRRDNETPEEREVRRMRDREAKRLQRMQETDEQRARRLQRDREAMRLKRANETPEKRQARLIREREAKRLKRRLEKMDMMLRAQFGQDPSAMAALAAEMNFFQLPVSNVELESQLLGKMTFEEQSNSTLH
SIO_010081: ZNF821
subclass of: SO_0000673
so part of: ZNF821
location: complement(join(189211..189865,190575..190741,191668..191772,192340..192482,192998..193123,200919..200958))
location: region:189211-200958:-1
so has part: feature:200919-200958:-1:exon
so has part: feature:192998-193123:-1:exon
so has part: feature:192340-192482:-1:exon
so has part: feature:191668-191772:-1:exon
so has part: feature:190575-190741:-1:exon
so has part: feature:189211-189865:-1:exon

XP_040427625.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:200919-200958:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:192998-193123:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:192340-192482:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:191668-191772:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:190575-190741:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:189211-189865:-1:exon

ZNF821
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8869
gene: ZNF821
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: zinc finger protein 821 isoform X2
translation: MMKNSFPGPLGDQRPAIHPLQDHDSSSSGSDDDETTQDEVSSHTSEEDGSMIKVKKELENAEKPAAGTPLMRDNEVPESLNADPMLGLSQCPLCQLECGSREQLIAHVYQHTAAVVSAKSYMCPVCGRALSSPGSLGRHLLIHSEDQLSNCAVCGARFTSHATFNSEKLPEVLSADRLPAPQSEGPSSVEGKDIAFHTPVYPASILLVCNNCAAYRKLLEAQTPGMRKWALRRQNEPLEVRLQRLERERTAKKSRRDNETPEEREVRRMRDREAKRLQRMQETDEQRARRLQRDREAMRLKRANETPEKRQARLIREREAKRLKRRLEKMDMMLRAQFGQDPSAMAALAAEMNFFQLPVSNVELESQLLGKMTFEEQSNSTLH
SIO_010081: ZNF821
subclass of: SO_0000673
so part of: ZNF821
location: complement(join(189211..189865,190575..190741,191668..191772,192340..192482,192998..193079))
location: region:189211-193079:-1
so has part: feature:192998-193079:-1:exon
so has part: feature:192340-192482:-1:exon
so has part: feature:191668-191772:-1:exon
so has part: feature:190575-190741:-1:exon
so has part: feature:189211-189865:-1:exon

XP_040427626.1
type: Protein
SIO_000068: ncbiprotein

position:193079:-1
position: 193079
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:192998-193079:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:192340-192482:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:191668-191772:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:190575-190741:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:189211-189865:-1:exon

ZNF821
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8869
gene: ZNF821
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: zinc finger protein 821 isoform X4
translation: MIKVKKELENAEKPAAGTPLMRDNEVPESLNADPMLGLSQCPLCQLECGSREQLIAHVYQHTAAVVSAKSYMCPVCGRALSSPGSLGRHLLIHSEDQLSNCAVCGARFTSHATFNSEKLPEVLSADRLPAPQSEGPSSVEGKDIAFHTPVYPASILLVCNNCAAYRKLLEAQTPGMRKWALRRQNEPLEVRLQRLERERTAKKSRRDNETPEEREVRRMRDREAKRLQRMQETDEQRARRLQRDREAMRLKRANETPEKRQARLIREREAKRLKRRLEKMDMMLRAQFGQDPSAMAALAAEMNFFQLPVSNVELESQLLGKMTFEEQSNSTLH
SIO_010081: ZNF821
subclass of: SO_0000673
so part of: ZNF821
location: complement(join(189211..189865,190575..190741,191668..191772,192340..192414))
location: region:189211-192414:-1
so has part: feature:192340-192414:-1:exon
so has part: feature:191668-191772:-1:exon
so has part: feature:190575-190741:-1:exon
so has part: feature:189211-189865:-1:exon

XP_040427628.1
type: Protein
SIO_000068: ncbiprotein

position:192414:-1
position: 192414
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:192340-192414:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:191668-191772:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:190575-190741:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:189211-189865:-1:exon

ZNF821
type: Miscellaneous RNA
subclass of: SO_0000673
RO_0002162: 8869
gene: ZNF821
product: zinc finger protein 821, transcript variant X7
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 long SRA read, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 12 samples with support for all annotated introns
transcript id: XR_005823837.1
SIO_010081: ZNF821
so part of: ZNF821
location: complement(join(196782..197405,198686..198879,200919..201010,202337..202401))
location: region:196782-202401:-1
so has part: feature:202337-202401:-1:exon
so has part: feature:200919-201010:-1:exon
so has part: feature:198686-198879:-1:exon
so has part: feature:196782-197405:-1:exon

position:196782:-1
position: 196782
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:202401:-1
position: 202401
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:202337-202401:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:200919-201010:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:198686-198879:-1:exon

position:198686:-1
position: 198686
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:198879:-1
position: 198879
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:196782-197405:-1:exon

position:197405:-1
position: 197405
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

IST1
type: Gene
subclass of: SO_0000704
RO_0002162: 8869
gene: IST1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 202949..211791
location: region:202949-211791:1
so has part: feature:202949-211791:1:exon
subclass of: SO_0000010

121076983
type: Gene
SIO_000068: ncbigene

position:202949:1
position: 202949
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:211791:1
position: 211791
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:202949-211791:1:exon

IST1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8869
gene: IST1
product: IST1 factor associated with ESCRT-III, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 29 long SRA reads, 9 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments, including 11 samples with support for all annotated introns
transcript id: XM_040571698.1
SIO_010081: IST1
subclass of: SO_0000673
so part of: IST1
location: join(202949..203229,205246..205345,206017..206197,206464..206551,206875..206958,207373..207483,207855..208061,209153..209245,210383..210431,211471..211791)
location: region:202949-211791:1
so has part: feature:202949-203229:1:exon
so has part: feature:205246-205345:1:exon
so has part: feature:206017-206197:1:exon
so has part: feature:206464-206551:1:exon
so has part: feature:206875-206958:1:exon
so has part: feature:207373-207483:1:exon
so has part: feature:207855-208061:1:exon
so has part: feature:209153-209245:1:exon
so has part: feature:210383-210431:1:exon
so has part: feature:211471-211791:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:202949-203229:1:exon

position:203229:1
position: 203229
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:205246-205345:1:exon

position:205246:1
position: 205246
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:205345:1
position: 205345
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:206017-206197:1:exon

position:206017:1
position: 206017
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:206197:1
position: 206197
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:206464-206551:1:exon

position:206464:1
position: 206464
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:206551:1
position: 206551
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:206875-206958:1:exon

position:206875:1
position: 206875
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:206958:1
position: 206958
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:207373-207483:1:exon

position:207373:1
position: 207373
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:207483:1
position: 207483
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:207855-208061:1:exon

position:207855:1
position: 207855
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:208061:1
position: 208061
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:209153-209245:1:exon

position:209153:1
position: 209153
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:209245:1
position: 209245
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:210383-210431:1:exon

position:210383:1
position: 210383
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:210431:1
position: 210431
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:211471-211791:1:exon

position:211471:1
position: 211471
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

IST1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8869
gene: IST1
product: IST1 factor associated with ESCRT-III, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 16 long SRA reads, 9 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
transcript id: XM_040571696.1
SIO_010081: IST1
subclass of: SO_0000673
so part of: IST1
location: join(202990..203258,205130..205345,206017..206197,206464..206551,206875..206958,207373..207483,207855..208061,209153..209245,210383..210431,211471..211791)
location: region:202990-211791:1
so has part: feature:202990-203258:1:exon
so has part: feature:205130-205345:1:exon
so has part: feature:206017-206197:1:exon
so has part: feature:206464-206551:1:exon
so has part: feature:206875-206958:1:exon
so has part: feature:207373-207483:1:exon
so has part: feature:207855-208061:1:exon
so has part: feature:209153-209245:1:exon
so has part: feature:210383-210431:1:exon
so has part: feature:211471-211791:1:exon

position:202990:1
position: 202990
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:202990-203258:1:exon

position:203258:1
position: 203258
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:205130-205345:1:exon

position:205130:1
position: 205130
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:206017-206197:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:206464-206551:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:206875-206958:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:207373-207483:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:207855-208061:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:209153-209245:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:210383-210431:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:211471-211791:1:exon

IST1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8869
gene: IST1
product: IST1 factor associated with ESCRT-III, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 38 long SRA reads, 9 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 12 samples with support for all annotated introns
transcript id: XM_040571695.1
SIO_010081: IST1
subclass of: SO_0000673
so part of: IST1
location: join(202990..203258,205246..205345,206017..206197,206464..206551,206875..206958,207373..207483,207855..208061,209153..209245,210383..210431,211471..211791)
location: region:202990-211791:1
so has part: feature:202990-203258:1:exon
so has part: feature:205246-205345:1:exon
so has part: feature:206017-206197:1:exon
so has part: feature:206464-206551:1:exon
so has part: feature:206875-206958:1:exon
so has part: feature:207373-207483:1:exon
so has part: feature:207855-208061:1:exon
so has part: feature:209153-209245:1:exon
so has part: feature:210383-210431:1:exon
so has part: feature:211471-211791:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:202990-203258:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:205246-205345:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:206017-206197:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:206464-206551:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:206875-206958:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:207373-207483:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:207855-208061:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:209153-209245:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:210383-210431:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:211471-211791:1:exon

IST1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8869
gene: IST1
product: IST1 factor associated with ESCRT-III, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 15 long SRA reads, 9 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_040571697.1
SIO_010081: IST1
subclass of: SO_0000673
so part of: IST1
location: join(203225..203258,204360..204434,205246..205345,206017..206197,206464..206551,206875..206958,207373..207483,207855..208061,209153..209245,210383..210431,211471..211791)
location: region:203225-211791:1
so has part: feature:203225-203258:1:exon
so has part: feature:204360-204434:1:exon
so has part: feature:205246-205345:1:exon
so has part: feature:206017-206197:1:exon
so has part: feature:206464-206551:1:exon
so has part: feature:206875-206958:1:exon
so has part: feature:207373-207483:1:exon
so has part: feature:207855-208061:1:exon
so has part: feature:209153-209245:1:exon
so has part: feature:210383-210431:1:exon
so has part: feature:211471-211791:1:exon

position:203225:1
position: 203225
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:203225-203258:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:204360-204434:1:exon

position:204360:1
position: 204360
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:204434:1
position: 204434
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:205246-205345:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:206017-206197:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:206464-206551:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:206875-206958:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:207373-207483:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:207855-208061:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:209153-209245:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:210383-210431:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:211471-211791:1:exon

IST1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8869
gene: IST1
product: IST1 factor associated with ESCRT-III, transcript variant X6
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 16 long SRA reads, 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 12 samples with support for all annotated introns
transcript id: XM_040571700.1
SIO_010081: IST1
subclass of: SO_0000673
so part of: IST1
location: join(203233..203258,205246..205345,206464..206551,206875..206958,207373..207483,207855..208061,209153..209245,210383..210431,211471..211791)
location: region:203233-211791:1
so has part: feature:203233-203258:1:exon
so has part: feature:205246-205345:1:exon
so has part: feature:206464-206551:1:exon
so has part: feature:206875-206958:1:exon
so has part: feature:207373-207483:1:exon
so has part: feature:207855-208061:1:exon
so has part: feature:209153-209245:1:exon
so has part: feature:210383-210431:1:exon
so has part: feature:211471-211791:1:exon

position:203233:1
position: 203233
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:203233-203258:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:205246-205345:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:206464-206551:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:206875-206958:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:207373-207483:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:207855-208061:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:209153-209245:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:210383-210431:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:211471-211791:1:exon

IST1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8869
gene: IST1
product: IST1 factor associated with ESCRT-III, transcript variant X5
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 15 long SRA reads, 9 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 6 samples with support for all annotated introns
transcript id: XM_040571699.1
SIO_010081: IST1
subclass of: SO_0000673
so part of: IST1
location: join(203537..203558,205246..205345,206017..206197,206464..206551,206875..206958,207373..207483,207855..208061,209153..209245,210383..210431,211471..211791)
location: region:203537-211791:1
so has part: feature:203537-203558:1:exon
so has part: feature:205246-205345:1:exon
so has part: feature:206017-206197:1:exon
so has part: feature:206464-206551:1:exon
so has part: feature:206875-206958:1:exon
so has part: feature:207373-207483:1:exon
so has part: feature:207855-208061:1:exon
so has part: feature:209153-209245:1:exon
so has part: feature:210383-210431:1:exon
so has part: feature:211471-211791:1:exon

position:203537:1
position: 203537
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:203537-203558:1:exon

position:203558:1
position: 203558
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:205246-205345:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:206017-206197:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:206464-206551:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:206875-206958:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:207373-207483:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:207855-208061:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:209153-209245:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:210383-210431:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:211471-211791:1:exon

IST1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8869
gene: IST1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: IST1 homolog isoform X1
translation: MLGSGFKAERLRVNLRLVINRLKLLEKKKTELAQKARKEIADYLAAGKDERARIRVEHIIREDYLVEAMEILELYCDLLLARFGLIQSMKELDSGLAEAVSTLIWAAPRLQSEVAELKIVADQLCAKYSKEYGKLCRTNQIGTVNDRLMHKLSVEAPPKILVERYLIEIAKNYNVPYEPDSVVMAEAPTGVEADLIDVGFTDDVKKGGHGGGGGGGFTAPLVGLDGLVPVPVPMPMPMPSPNPPFSYPPPKGPENFNGLPVGTYQPFTNIHPPPIPANPPTYESIDEPNADKDDASAPVAGPGPKSEPSPKPRAGPPNTIDNFVLPELPSVPDTLPTASAGTNSSASEDIDFDDLSRRFEELKKKT
SIO_010081: IST1
subclass of: SO_0000673
so part of: IST1
location: join(205258..205345,206017..206197,206464..206551,206875..206958,207373..207483,207855..208061,209153..209245,210383..210431,211471..211670)
location: region:205258-211670:1
so has part: feature:205258-205345:1:exon
so has part: feature:206017-206197:1:exon
so has part: feature:206464-206551:1:exon
so has part: feature:206875-206958:1:exon
so has part: feature:207373-207483:1:exon
so has part: feature:207855-208061:1:exon
so has part: feature:209153-209245:1:exon
so has part: feature:210383-210431:1:exon
so has part: feature:211471-211670:1:exon

XP_040427629.1
type: Protein
SIO_000068: ncbiprotein

position:205258:1
position: 205258
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:211670:1
position: 211670
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:205258-205345:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:206017-206197:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:206464-206551:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:206875-206958:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:207373-207483:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:207855-208061:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:209153-209245:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:210383-210431:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:211471-211670:1:exon

IST1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8869
gene: IST1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: IST1 homolog isoform X1
translation: MLGSGFKAERLRVNLRLVINRLKLLEKKKTELAQKARKEIADYLAAGKDERARIRVEHIIREDYLVEAMEILELYCDLLLARFGLIQSMKELDSGLAEAVSTLIWAAPRLQSEVAELKIVADQLCAKYSKEYGKLCRTNQIGTVNDRLMHKLSVEAPPKILVERYLIEIAKNYNVPYEPDSVVMAEAPTGVEADLIDVGFTDDVKKGGHGGGGGGGFTAPLVGLDGLVPVPVPMPMPMPSPNPPFSYPPPKGPENFNGLPVGTYQPFTNIHPPPIPANPPTYESIDEPNADKDDASAPVAGPGPKSEPSPKPRAGPPNTIDNFVLPELPSVPDTLPTASAGTNSSASEDIDFDDLSRRFEELKKKT
SIO_010081: IST1
subclass of: SO_0000673
so part of: IST1
location: join(205258..205345,206017..206197,206464..206551,206875..206958,207373..207483,207855..208061,209153..209245,210383..210431,211471..211670)
location: region:205258-211670:1
so has part: feature:205258-205345:1:exon
so has part: feature:206017-206197:1:exon
so has part: feature:206464-206551:1:exon
so has part: feature:206875-206958:1:exon
so has part: feature:207373-207483:1:exon
so has part: feature:207855-208061:1:exon
so has part: feature:209153-209245:1:exon
so has part: feature:210383-210431:1:exon
so has part: feature:211471-211670:1:exon

XP_040427630.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:205258-205345:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:206017-206197:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:206464-206551:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:206875-206958:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:207373-207483:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:207855-208061:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:209153-209245:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:210383-210431:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:211471-211670:1:exon

IST1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8869
gene: IST1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: IST1 homolog isoform X1
translation: MLGSGFKAERLRVNLRLVINRLKLLEKKKTELAQKARKEIADYLAAGKDERARIRVEHIIREDYLVEAMEILELYCDLLLARFGLIQSMKELDSGLAEAVSTLIWAAPRLQSEVAELKIVADQLCAKYSKEYGKLCRTNQIGTVNDRLMHKLSVEAPPKILVERYLIEIAKNYNVPYEPDSVVMAEAPTGVEADLIDVGFTDDVKKGGHGGGGGGGFTAPLVGLDGLVPVPVPMPMPMPSPNPPFSYPPPKGPENFNGLPVGTYQPFTNIHPPPIPANPPTYESIDEPNADKDDASAPVAGPGPKSEPSPKPRAGPPNTIDNFVLPELPSVPDTLPTASAGTNSSASEDIDFDDLSRRFEELKKKT
SIO_010081: IST1
subclass of: SO_0000673
so part of: IST1
location: join(205258..205345,206017..206197,206464..206551,206875..206958,207373..207483,207855..208061,209153..209245,210383..210431,211471..211670)
location: region:205258-211670:1
so has part: feature:205258-205345:1:exon
so has part: feature:206017-206197:1:exon
so has part: feature:206464-206551:1:exon
so has part: feature:206875-206958:1:exon
so has part: feature:207373-207483:1:exon
so has part: feature:207855-208061:1:exon
so has part: feature:209153-209245:1:exon
so has part: feature:210383-210431:1:exon
so has part: feature:211471-211670:1:exon

XP_040427631.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:205258-205345:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:206017-206197:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:206464-206551:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:206875-206958:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:207373-207483:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:207855-208061:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:209153-209245:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:210383-210431:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:211471-211670:1:exon

IST1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8869
gene: IST1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: IST1 homolog isoform X1
translation: MLGSGFKAERLRVNLRLVINRLKLLEKKKTELAQKARKEIADYLAAGKDERARIRVEHIIREDYLVEAMEILELYCDLLLARFGLIQSMKELDSGLAEAVSTLIWAAPRLQSEVAELKIVADQLCAKYSKEYGKLCRTNQIGTVNDRLMHKLSVEAPPKILVERYLIEIAKNYNVPYEPDSVVMAEAPTGVEADLIDVGFTDDVKKGGHGGGGGGGFTAPLVGLDGLVPVPVPMPMPMPSPNPPFSYPPPKGPENFNGLPVGTYQPFTNIHPPPIPANPPTYESIDEPNADKDDASAPVAGPGPKSEPSPKPRAGPPNTIDNFVLPELPSVPDTLPTASAGTNSSASEDIDFDDLSRRFEELKKKT
SIO_010081: IST1
subclass of: SO_0000673
so part of: IST1
location: join(205258..205345,206017..206197,206464..206551,206875..206958,207373..207483,207855..208061,209153..209245,210383..210431,211471..211670)
location: region:205258-211670:1
so has part: feature:205258-205345:1:exon
so has part: feature:206017-206197:1:exon
so has part: feature:206464-206551:1:exon
so has part: feature:206875-206958:1:exon
so has part: feature:207373-207483:1:exon
so has part: feature:207855-208061:1:exon
so has part: feature:209153-209245:1:exon
so has part: feature:210383-210431:1:exon
so has part: feature:211471-211670:1:exon

XP_040427632.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:205258-205345:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:206017-206197:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:206464-206551:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:206875-206958:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:207373-207483:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:207855-208061:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:209153-209245:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:210383-210431:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:211471-211670:1:exon

IST1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8869
gene: IST1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: IST1 homolog isoform X1
translation: MLGSGFKAERLRVNLRLVINRLKLLEKKKTELAQKARKEIADYLAAGKDERARIRVEHIIREDYLVEAMEILELYCDLLLARFGLIQSMKELDSGLAEAVSTLIWAAPRLQSEVAELKIVADQLCAKYSKEYGKLCRTNQIGTVNDRLMHKLSVEAPPKILVERYLIEIAKNYNVPYEPDSVVMAEAPTGVEADLIDVGFTDDVKKGGHGGGGGGGFTAPLVGLDGLVPVPVPMPMPMPSPNPPFSYPPPKGPENFNGLPVGTYQPFTNIHPPPIPANPPTYESIDEPNADKDDASAPVAGPGPKSEPSPKPRAGPPNTIDNFVLPELPSVPDTLPTASAGTNSSASEDIDFDDLSRRFEELKKKT
SIO_010081: IST1
subclass of: SO_0000673
so part of: IST1
location: join(205258..205345,206017..206197,206464..206551,206875..206958,207373..207483,207855..208061,209153..209245,210383..210431,211471..211670)
location: region:205258-211670:1
so has part: feature:205258-205345:1:exon
so has part: feature:206017-206197:1:exon
so has part: feature:206464-206551:1:exon
so has part: feature:206875-206958:1:exon
so has part: feature:207373-207483:1:exon
so has part: feature:207855-208061:1:exon
so has part: feature:209153-209245:1:exon
so has part: feature:210383-210431:1:exon
so has part: feature:211471-211670:1:exon

XP_040427633.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:205258-205345:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:206017-206197:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:206464-206551:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:206875-206958:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:207373-207483:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:207855-208061:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:209153-209245:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:210383-210431:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:211471-211670:1:exon

IST1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8869
gene: IST1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: IST1 homolog isoform X2
translation: MHKLSVEAPPKILVERYLIEIAKNYNVPYEPDSVVMAEAPTGVEADLIDVGFTDDVKKGGHGGGGGGGFTAPLVGLDGLVPVPVPMPMPMPSPNPPFSYPPPKGPENFNGLPVGTYQPFTNIHPPPIPANPPTYESIDEPNADKDDASAPVAGPGPKSEPSPKPRAGPPNTIDNFVLPELPSVPDTLPTASAGTNSSASEDIDFDDLSRRFEELKKKT
SIO_010081: IST1
subclass of: SO_0000673
so part of: IST1
location: join(207376..207483,207855..208061,209153..209245,210383..210431,211471..211670)
location: region:207376-211670:1
so has part: feature:207376-207483:1:exon
so has part: feature:207855-208061:1:exon
so has part: feature:209153-209245:1:exon
so has part: feature:210383-210431:1:exon
so has part: feature:211471-211670:1:exon

XP_040427634.1
type: Protein
SIO_000068: ncbiprotein

position:207376:1
position: 207376
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:207376-207483:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:207855-208061:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:209153-209245:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:210383-210431:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:211471-211670:1:exon

DHODH
type: Gene
subclass of: SO_0000704
RO_0002162: 8869
gene: DHODH
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: <212935..216380
location: region:212935-216380:1
so has part: feature:212935-216380:1:exon
subclass of: SO_0000010

121076900
type: Gene
SIO_000068: ncbigene

position:212935:1
position: 212935
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition

position:216380:1
position: 216380
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:212935-216380:1:exon

DHODH
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8869
gene: DHODH
product: dihydroorotate dehydrogenase (quinone)
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 long SRA read, 8 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments, including 11 samples with support for all annotated introns
transcript id: XM_040571544.1
SIO_010081: DHODH
subclass of: SO_0000673
so part of: DHODH
location: join(<212935..213165,213317..213516,213727..213809,214332..214519,214938..215051,215390..215543,215615..215774,215906..216380)
location: region:212935-216380:1
so has part: feature:212935-213165:1:exon
so has part: feature:213317-213516:1:exon
so has part: feature:213727-213809:1:exon
so has part: feature:214332-214519:1:exon
so has part: feature:214938-215051:1:exon
so has part: feature:215390-215543:1:exon
so has part: feature:215615-215774:1:exon
so has part: feature:215906-216380:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:212935-213165:1:exon

position:213165:1
position: 213165
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:213317-213516:1:exon

position:213317:1
position: 213317
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:213516:1
position: 213516
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:213727-213809:1:exon

position:213727:1
position: 213727
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:213809:1
position: 213809
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:214332-214519:1:exon

position:214332:1
position: 214332
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:214519:1
position: 214519
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:214938-215051:1:exon

position:214938:1
position: 214938
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:215051:1
position: 215051
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:215390-215543:1:exon

position:215390:1
position: 215390
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:215543:1
position: 215543
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:215615-215774:1:exon

position:215615:1
position: 215615
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:215774:1
position: 215774
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:215906-216380:1:exon

position:215906:1
position: 215906
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

DHODH
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8869
gene: DHODH
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: dihydroorotate dehydrogenase (quinone), mitochondrial
translation: ADGLPQRRLRALAAALGGCGLLLGSALAAGDERLQAAVLPAVLPALRAVPPEAAHGLALRAAAFGLLPAARPDGPALEVRVLGRRFRNPLGLAAGFDKHGEAVDGLYKAGFGFVEVGTVTPKPQEGNPKPRVFRLVEDEAVINRYGFNSHGHAAVERRLRARQEAQRKLTDAGMPLGVNLGKNKSSTDAVADYVAGVRVLGPLADYLVVNVSSPNTPGLRDLQGKAELRDLLTKVLAERDTLPCKHKPAVLVKIAPDLTLQDKQDIASVVCELGVDGLIVSNTTVSRPRDLQSMQRLEPGGLSGKPLRELSTQTVREMYALTQGRVPIIGVGGVSSGRDALEKICAGASLVQMYTALVYHGPLVVGAVKRELEELLREQGFKSVMEAVGADHRC
SIO_010081: DHODH
subclass of: SO_0000673
so part of: DHODH
location: join(<212935..213165,213317..213516,213727..213809,214332..214519,214938..215051,215390..215543,215615..215774,215906..215960)
location: region:212935-215960:1
so has part: feature:212935-213165:1:exon
so has part: feature:213317-213516:1:exon
so has part: feature:213727-213809:1:exon
so has part: feature:214332-214519:1:exon
so has part: feature:214938-215051:1:exon
so has part: feature:215390-215543:1:exon
so has part: feature:215615-215774:1:exon
so has part: feature:215906-215960:1:exon

XP_040427478.1
type: Protein
SIO_000068: ncbiprotein

position:215960:1
position: 215960
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:212935-213165:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:213317-213516:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:213727-213809:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:214332-214519:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:214938-215051:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:215390-215543:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:215615-215774:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:215906-215960:1:exon

LOC121076987
type: Gene
subclass of: SO_0000704
RO_0002162: 8869
gene: LOC121076987
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 217806..219989
location: region:217806-219989:1
so has part: feature:217806-219989:1:exon
subclass of: SO_0000010

121076987
type: Gene
SIO_000068: ncbigene

position:217806:1
position: 217806
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:219989:1
position: 219989
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:217806-219989:1:exon

LOC121076987
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8869
gene: LOC121076987
product: haptoglobin-like
exception: unclassified transcription discrepancy
note: The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: inserted 2 bases in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_040571704.1
SIO_010081: LOC121076987
subclass of: SO_0000673
so part of: LOC121076987
location: join(217806..217976,218278..218342,218859..218933,219176..219989)
location: region:217806-219989:1
so has part: feature:217806-217976:1:exon
so has part: feature:218278-218342:1:exon
so has part: feature:218859-218933:1:exon
so has part: feature:219176-219989:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:217806-217976:1:exon

position:217976:1
position: 217976
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:218278-218342:1:exon

position:218278:1
position: 218278
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:218342:1
position: 218342
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:218859-218933:1:exon

position:218859:1
position: 218859
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:218933:1
position: 218933
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:219176-219989:1:exon

position:219176:1
position: 219176
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC121076987
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8869
gene: LOC121076987
exception: unclassified translation discrepancy
note: The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: inserted 2 bases in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: LOW QUALITY PROTEIN: haptoglobin-like
translation: MGTAVLLFAGLAWTLLEITAATTGTYKCDENLAWVSPEAGKEAPVCEPVCGKPENPPAPMQRIIRGLLAGKGSFPWQARMVSRHNLTTGATLISDQWLLTTGRKVYLNHSEEATPEEIAPTLRLFLGGRGLPALGVERVVLHPGXAVDLALLKLRQKVPVGAEVMPICLPQRDYVQPGRVGYVSGWGRGATFAFPEAPKYVMLPVAEADKCRQYYAAQGPHGVRPVLGDATFCAGMSELREDTCYGDAGGAFAVQDSGDGAWYAAGVLSHDRTCAASKCGVCVDVRRVLDWVRETVAAA
SIO_010081: LOC121076987
subclass of: SO_0000673
so part of: LOC121076987
location: join(217972..217976,218278..218342,218859..218933,219176..219928)
location: region:217972-219928:1
so has part: feature:217972-217976:1:exon
so has part: feature:218278-218342:1:exon
so has part: feature:218859-218933:1:exon
so has part: feature:219176-219928:1:exon

XP_040427638.1
type: Protein
SIO_000068: ncbiprotein

position:217972:1
position: 217972
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:219928:1
position: 219928
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:217972-217976:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:218278-218342:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:218859-218933:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:219176-219928:1:exon

DHX38
type: Gene
subclass of: SO_0000704
RO_0002162: 8869
gene: DHX38
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 220379..231063
location: region:220379-231063:1
so has part: feature:220379-231063:1:exon
subclass of: SO_0000010

121076975
type: Gene
SIO_000068: ncbigene

position:220379:1
position: 220379
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:231063:1
position: 231063
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:220379-231063:1:exon

DHX38
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8869
gene: DHX38
product: DEAH-box helicase 38
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 41 long SRA reads, 16 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 12 samples with support for all annotated introns
transcript id: XM_040571671.1
SIO_010081: DHX38
subclass of: SO_0000673
so part of: DHX38
location: join(220379..220786,221280..221467,221624..221728,222149..222314,222433..222551,222700..222776,223009..223164,224125..224286,224372..224479,225396..225508,225610..225747,226001..226187,226277..226462,226924..227064,227238..227348,227428..227544,227792..227899,228018..228130,228718..228926,229013..229167,229245..229400,229476..229610,229688..229813,230222..230317,230540..230661,230805..231063)
location: region:220379-231063:1
so has part: feature:220379-220786:1:exon
so has part: feature:221280-221467:1:exon
so has part: feature:221624-221728:1:exon
so has part: feature:222149-222314:1:exon
so has part: feature:222433-222551:1:exon
so has part: feature:222700-222776:1:exon
so has part: feature:223009-223164:1:exon
so has part: feature:224125-224286:1:exon
so has part: feature:224372-224479:1:exon
so has part: feature:225396-225508:1:exon
so has part: feature:225610-225747:1:exon
so has part: feature:226001-226187:1:exon
so has part: feature:226277-226462:1:exon
so has part: feature:226924-227064:1:exon
so has part: feature:227238-227348:1:exon
so has part: feature:227428-227544:1:exon
so has part: feature:227792-227899:1:exon
so has part: feature:228018-228130:1:exon
so has part: feature:228718-228926:1:exon
so has part: feature:229013-229167:1:exon
so has part: feature:229245-229400:1:exon
so has part: feature:229476-229610:1:exon
so has part: feature:229688-229813:1:exon
so has part: feature:230222-230317:1:exon
so has part: feature:230540-230661:1:exon
so has part: feature:230805-231063:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:220379-220786:1:exon

position:220786:1
position: 220786
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:221280-221467:1:exon

position:221280:1
position: 221280
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:221467:1
position: 221467
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:221624-221728:1:exon

position:221624:1
position: 221624
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:221728:1
position: 221728
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:222149-222314:1:exon

position:222149:1
position: 222149
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:222314:1
position: 222314
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:222433-222551:1:exon

position:222433:1
position: 222433
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:222551:1
position: 222551
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:222700-222776:1:exon

position:222700:1
position: 222700
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:222776:1
position: 222776
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:223009-223164:1:exon

position:223009:1
position: 223009
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:223164:1
position: 223164
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:224125-224286:1:exon

position:224125:1
position: 224125
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:224286:1
position: 224286
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:224372-224479:1:exon

position:224372:1
position: 224372
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:224479:1
position: 224479
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:225396-225508:1:exon

position:225396:1
position: 225396
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:225508:1
position: 225508
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:225610-225747:1:exon

position:225610:1
position: 225610
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:225747:1
position: 225747
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:226001-226187:1:exon

position:226001:1
position: 226001
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:226187:1
position: 226187
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:226277-226462:1:exon

position:226277:1
position: 226277
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:226462:1
position: 226462
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:226924-227064:1:exon

position:226924:1
position: 226924
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:227064:1
position: 227064
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:227238-227348:1:exon

position:227238:1
position: 227238
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:227348:1
position: 227348
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:227428-227544:1:exon

position:227428:1
position: 227428
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:227544:1
position: 227544
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:227792-227899:1:exon

position:227792:1
position: 227792
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:227899:1
position: 227899
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:228018-228130:1:exon

position:228018:1
position: 228018
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:228130:1
position: 228130
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:228718-228926:1:exon

position:228718:1
position: 228718
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:228926:1
position: 228926
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:229013-229167:1:exon

position:229013:1
position: 229013
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:229167:1
position: 229167
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:229245-229400:1:exon

position:229245:1
position: 229245
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:229400:1
position: 229400
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 22
SIO_000628: feature:229476-229610:1:exon

position:229476:1
position: 229476
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:229610:1
position: 229610
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 23
SIO_000628: feature:229688-229813:1:exon

position:229688:1
position: 229688
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:229813:1
position: 229813
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 24
SIO_000628: feature:230222-230317:1:exon

position:230222:1
position: 230222
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:230317:1
position: 230317
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 25
SIO_000628: feature:230540-230661:1:exon

position:230540:1
position: 230540
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:230661:1
position: 230661
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 26
SIO_000628: feature:230805-231063:1:exon

position:230805:1
position: 230805
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

DHX38
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8869
gene: DHX38
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: pre-mRNA-splicing factor ATP-dependent RNA helicase PRP16
translation: MSEAGEQSLHRLAGTGPEAGGLVLRGRSAAAEQHVFKAPAPRASLLGLDVLAAQKRREREEEAAAGGGGGKRSRVCSYRDWEEGRDEAGSPEEDEDEDEEEEEAGRSGRSARKDRHYRSVHVETPSYTGGVSEEFWERSRQRERDRREHGVFASSKEEKERKKERSRDRNHDRKRDREERDRSRHSSRSERDGSLERSSRRSEPESPRHRPKDAATPSRSSWEEDDSGYSSSRRSQWESPSPTPSYRDSERSHRASFLRDTDRRDRDRSVRSRYSDKTPLPTPSYKYNEWADDRRHLGATPRLSRGRGRREDGEEGIAFETEEERQQWEDDQRQADRDWYMMDEGYDEFHNPLAYSSEEYVKKREQHLHKQKQKRISAQRRQINEDNERWETNRMLTSGVVHRIEVDEDFEEDNSAKVHLLVHNLVPPFLDGRIVFTKQPEPVIPVKDATSDLAIIARKGSQLVRKHREQKERKRAQHKHWELAGTKLGDIMGIKKEEEKDEMVTEDGKVDYKTEQKFAEHMKEKSEARSEFAKKKSILEQRQYLPIFAVQQELLSILRDNSIVIVVGETGSGKTTQLTQYLHEDGYTDYGMIGCTQPRRVAAMSVAKRVSEEMGVRLGEEVGYAIRFEDCTSENTIIKYMTDGILLRESLREADLDNYSAIIMDEAHERSLNTDVLFGLLREVVARRSDLKLVVTSATMDADKFASFFGNVPIFHIPGRTFPVDILFSKTPQEDYVEAAVKQALQVHLSGAPGDILVFMPGQEDIEVTSEQIVEHLEELEKAPALAVLPIYSQLPSDLQAKIFQKAPDGVRKCIVATNIAETSLTVDGIMFVIDSGYCKLKVFNPRIGMDALQIYPISQANANQRAGRAGRTGPGHCFRLYTQSAYKNELLTTTVPEIQRTNLANVVLLLKSLGVQDLLQFHFMDPPPEDNMLNSMYQLWILGALDNTGGLTSTGRLMVEFPLDPALSKMLIVSCDMGCSSEILLIVSMLSVPAIFYRPKGREEESDQVREKFAVPESDHLTYLNVYLQWKNNNYSTLWCNQHFIHAKAMRKVREVRAQLKDIMVQQRMSLASCGTDWDVVRKCICAAYFHQAAKLKGIGEYVNIRTGMPCHLHPTSSLFGMGYTPDYIVYHELVMTTKEYMQCVTAVDGEWLAELGPMFYSIKHAGKSRQENRRRAKEEVSAMEEEMALAEEQLRARREEQERRNPLGSARSTKIYTPGRKEQGEPLTPRRTPARFGL
SIO_010081: DHX38
subclass of: SO_0000673
so part of: DHX38
location: join(220443..220786,221280..221467,221624..221728,222149..222314,222433..222551,222700..222776,223009..223164,224125..224286,224372..224479,225396..225508,225610..225747,226001..226187,226277..226462,226924..227064,227238..227348,227428..227544,227792..227899,228018..228130,228718..228926,229013..229167,229245..229400,229476..229610,229688..229813,230222..230317,230540..230661,230805..230889)
location: region:220443-230889:1
so has part: feature:220443-220786:1:exon
so has part: feature:221280-221467:1:exon
so has part: feature:221624-221728:1:exon
so has part: feature:222149-222314:1:exon
so has part: feature:222433-222551:1:exon
so has part: feature:222700-222776:1:exon
so has part: feature:223009-223164:1:exon
so has part: feature:224125-224286:1:exon
so has part: feature:224372-224479:1:exon
so has part: feature:225396-225508:1:exon
so has part: feature:225610-225747:1:exon
so has part: feature:226001-226187:1:exon
so has part: feature:226277-226462:1:exon
so has part: feature:226924-227064:1:exon
so has part: feature:227238-227348:1:exon
so has part: feature:227428-227544:1:exon
so has part: feature:227792-227899:1:exon
so has part: feature:228018-228130:1:exon
so has part: feature:228718-228926:1:exon
so has part: feature:229013-229167:1:exon
so has part: feature:229245-229400:1:exon
so has part: feature:229476-229610:1:exon
so has part: feature:229688-229813:1:exon
so has part: feature:230222-230317:1:exon
so has part: feature:230540-230661:1:exon
so has part: feature:230805-230889:1:exon

XP_040427605.1
type: Protein
SIO_000068: ncbiprotein

position:220443:1
position: 220443
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:230889:1
position: 230889
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:220443-220786:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:221280-221467:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:221624-221728:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:222149-222314:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:222433-222551:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:222700-222776:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:223009-223164:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:224125-224286:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:224372-224479:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:225396-225508:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:225610-225747:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:226001-226187:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:226277-226462:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:226924-227064:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:227238-227348:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:227428-227544:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:227792-227899:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:228018-228130:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:228718-228926:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:229013-229167:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:229245-229400:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:229476-229610:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:229688-229813:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:230222-230317:1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:230540-230661:1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:230805-230889:1:exon

PMFBP1
type: Gene
subclass of: SO_0000704
RO_0002162: 8869
gene: PMFBP1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(231103..237120)
location: region:231103-237120:-1
so has part: feature:231103-237120:-1:exon
subclass of: SO_0000010

121076979
type: Gene
SIO_000068: ncbigene

position:231103:-1
position: 231103
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:237120:-1
position: 237120
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:231103-237120:-1:exon

PMFBP1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8869
gene: PMFBP1
product: polyamine modulated factor 1 binding protein 1, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_040571684.1
SIO_010081: PMFBP1
subclass of: SO_0000673
so part of: PMFBP1
location: complement(join(231103..231192,231394..231487,231602..231676,231764..231873,232184..232522,232602..232757,232935..233123,233427..233580,233697..233871,234440..234548,234638..234745,235412..235660,236149..236278,236609..237120))
location: region:231103-237120:-1
so has part: feature:236609-237120:-1:exon
so has part: feature:236149-236278:-1:exon
so has part: feature:235412-235660:-1:exon
so has part: feature:234638-234745:-1:exon
so has part: feature:234440-234548:-1:exon
so has part: feature:233697-233871:-1:exon
so has part: feature:233427-233580:-1:exon
so has part: feature:232935-233123:-1:exon
so has part: feature:232602-232757:-1:exon
so has part: feature:232184-232522:-1:exon
so has part: feature:231764-231873:-1:exon
so has part: feature:231602-231676:-1:exon
so has part: feature:231394-231487:-1:exon
so has part: feature:231103-231192:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:236609-237120:-1:exon

position:236609:-1
position: 236609
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:236149-236278:-1:exon

position:236149:-1
position: 236149
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:236278:-1
position: 236278
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:235412-235660:-1:exon

position:235412:-1
position: 235412
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:235660:-1
position: 235660
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:234638-234745:-1:exon

position:234638:-1
position: 234638
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:234745:-1
position: 234745
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:234440-234548:-1:exon

position:234440:-1
position: 234440
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:234548:-1
position: 234548
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:233697-233871:-1:exon

position:233697:-1
position: 233697
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:233871:-1
position: 233871
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:233427-233580:-1:exon

position:233427:-1
position: 233427
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:233580:-1
position: 233580
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:232935-233123:-1:exon

position:232935:-1
position: 232935
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:233123:-1
position: 233123
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:232602-232757:-1:exon

position:232602:-1
position: 232602
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:232757:-1
position: 232757
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:232184-232522:-1:exon

position:232184:-1
position: 232184
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:232522:-1
position: 232522
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:231764-231873:-1:exon

position:231764:-1
position: 231764
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:231873:-1
position: 231873
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:231602-231676:-1:exon

position:231602:-1
position: 231602
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:231676:-1
position: 231676
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:231394-231487:-1:exon

position:231394:-1
position: 231394
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:231487:-1
position: 231487
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:231103-231192:-1:exon

position:231192:-1
position: 231192
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

PMFBP1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8869
gene: PMFBP1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: polyamine-modulated factor 1-binding protein 1 isoform X2
translation: MTCQGQSTAEGEHGAQSLREVPAPLGQPEQPWGGLPGAEAVMAELSSSTQQRQQEMESCQSQGQRQAEVPEPQQREPQACQATEQQELEPAHVLASLQALQLDLDFCRGRNCKRLVQLQQQECVVEQKHQDLVFLMQHYQEVIGKGQKDEAVQTEVTYAGCRDNADTSHGLPKEHVELLKQVVVEAEAKHCRQSRTAEMLRCRAQDTLRAEQSTAKEAQAAAQQPPAWSQQQCAEEQSCPSPGKGTQREAGRRAEQELQALQEQAASSEAELTQSRALAAWLQTQLSQWQWKQQVTLELATQHMHATARAKEKLQKSQEQLHALREQLRVREDQSQGLQHGLAQLQEELGATRAREQRSLQQLSGAKETIRDLQQVVASSRKHKAELLQQVQDVATLQAELAQAQQKKAKQEEKIAAYKEQMQQLHLELRKLQEAQEQSKQKAHCLQQRLQELSSQAQRWQQLHQDSQQALALREEELVVCKVELAFLKEELSKAMEQVQDRNMQHHSSRTGGVQAEPLTPEDKPWPTGTAEVERTCQGTAHCRAQANTGGDCGSVVTLHTSHTLGWSNSSRPHQERELVLVNISQCAKEQMQSSEKRGHKTQQQINHVAELTGNKEHLQDTLGSLQVENKYLRVRTHEQHHKGEQMKAVQGSNLTARAMHNSAGLPLPRAQLQDEK
SIO_010081: PMFBP1
subclass of: SO_0000673
so part of: PMFBP1
location: complement(join(231103..231192,231394..231487,231602..231676,231764..231873,232184..232522,232602..232757,232935..233123,233427..233580,233697..233871,234440..234548,234638..234745,235412..235660,236149..236278,236609..236664))
location: region:231103-236664:-1
so has part: feature:236609-236664:-1:exon
so has part: feature:236149-236278:-1:exon
so has part: feature:235412-235660:-1:exon
so has part: feature:234638-234745:-1:exon
so has part: feature:234440-234548:-1:exon
so has part: feature:233697-233871:-1:exon
so has part: feature:233427-233580:-1:exon
so has part: feature:232935-233123:-1:exon
so has part: feature:232602-232757:-1:exon
so has part: feature:232184-232522:-1:exon
so has part: feature:231764-231873:-1:exon
so has part: feature:231602-231676:-1:exon
so has part: feature:231394-231487:-1:exon
so has part: feature:231103-231192:-1:exon

XP_040427618.1
type: Protein
SIO_000068: ncbiprotein

position:236664:-1
position: 236664
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:236609-236664:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:236149-236278:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:235412-235660:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:234638-234745:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:234440-234548:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:233697-233871:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:233427-233580:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:232935-233123:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:232602-232757:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:232184-232522:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:231764-231873:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:231602-231676:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:231394-231487:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:231103-231192:-1:exon

PMFBP1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8869
gene: PMFBP1
product: polyamine modulated factor 1 binding protein 1, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_040571683.1
SIO_010081: PMFBP1
subclass of: SO_0000673
so part of: PMFBP1
location: complement(join(231208..231487,231602..231676,231764..231873,232184..232522,232602..232757,232935..233123,233427..233580,233697..233871,234440..234548,234638..234745,235412..235660,236149..236278,236609..237120))
location: region:231208-237120:-1
so has part: feature:236609-237120:-1:exon
so has part: feature:236149-236278:-1:exon
so has part: feature:235412-235660:-1:exon
so has part: feature:234638-234745:-1:exon
so has part: feature:234440-234548:-1:exon
so has part: feature:233697-233871:-1:exon
so has part: feature:233427-233580:-1:exon
so has part: feature:232935-233123:-1:exon
so has part: feature:232602-232757:-1:exon
so has part: feature:232184-232522:-1:exon
so has part: feature:231764-231873:-1:exon
so has part: feature:231602-231676:-1:exon
so has part: feature:231208-231487:-1:exon

position:231208:-1
position: 231208
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:236609-237120:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:236149-236278:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:235412-235660:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:234638-234745:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:234440-234548:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:233697-233871:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:233427-233580:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:232935-233123:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:232602-232757:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:232184-232522:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:231764-231873:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:231602-231676:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:231208-231487:-1:exon

PMFBP1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8869
gene: PMFBP1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: polyamine-modulated factor 1-binding protein 1 isoform X1
translation: MTCQGQSTAEGEHGAQSLREVPAPLGQPEQPWGGLPGAEAVMAELSSSTQQRQQEMESCQSQGQRQAEVPEPQQREPQACQATEQQELEPAHVLASLQALQLDLDFCRGRNCKRLVQLQQQECVVEQKHQDLVFLMQHYQEVIGKGQKDEAVQTEVTYAGCRDNADTSHGLPKEHVELLKQVVVEAEAKHCRQSRTAEMLRCRAQDTLRAEQSTAKEAQAAAQQPPAWSQQQCAEEQSCPSPGKGTQREAGRRAEQELQALQEQAASSEAELTQSRALAAWLQTQLSQWQWKQQVTLELATQHMHATARAKEKLQKSQEQLHALREQLRVREDQSQGLQHGLAQLQEELGATRAREQRSLQQLSGAKETIRDLQQVVASSRKHKAELLQQVQDVATLQAELAQAQQKKAKQEEKIAAYKEQMQQLHLELRKLQEAQEQSKQKAHCLQQRLQELSSQAQRWQQLHQDSQQALALREEELVVCKVELAFLKEELSKAMEQVQDRNMQHHSSRTGGVQAEPLTPEDKPWPTGTAEVERTCQGTAHCRAQANTGGDCGSVVTLHTSHTLGWSNSSRPHQERELVLVNISQCAKEQMQSSEKRGHKTQQQINHVAELTGNKEHLQDTLGSLQVENKYLRVRTHEQHHKGEQMKVSKIPDTAWPRTVLSRPSLVYRDSWASVACPEHRSRTNCLCSIPGQVWAKHRLSLPSKPV
SIO_010081: PMFBP1
subclass of: SO_0000673
so part of: PMFBP1
location: complement(join(231211..231487,231602..231676,231764..231873,232184..232522,232602..232757,232935..233123,233427..233580,233697..233871,234440..234548,234638..234745,235412..235660,236149..236278,236609..236664))
location: region:231211-236664:-1
so has part: feature:236609-236664:-1:exon
so has part: feature:236149-236278:-1:exon
so has part: feature:235412-235660:-1:exon
so has part: feature:234638-234745:-1:exon
so has part: feature:234440-234548:-1:exon
so has part: feature:233697-233871:-1:exon
so has part: feature:233427-233580:-1:exon
so has part: feature:232935-233123:-1:exon
so has part: feature:232602-232757:-1:exon
so has part: feature:232184-232522:-1:exon
so has part: feature:231764-231873:-1:exon
so has part: feature:231602-231676:-1:exon
so has part: feature:231211-231487:-1:exon

XP_040427617.1
type: Protein
SIO_000068: ncbiprotein

position:231211:-1
position: 231211
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:236609-236664:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:236149-236278:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:235412-235660:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:234638-234745:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:234440-234548:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:233697-233871:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:233427-233580:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:232935-233123:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:232602-232757:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:232184-232522:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:231764-231873:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:231602-231676:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:231211-231487:-1:exon

LOC121076989
type: Gene
subclass of: SO_0000704
RO_0002162: 8869
gene: LOC121076989
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(244622..355583)
location: region:244622-355583:-1
so has part: feature:244622-355583:-1:exon
subclass of: SO_0000011

121076989
type: Gene
SIO_000068: ncbigene

position:244622:-1
position: 244622
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:355583:-1
position: 355583
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:244622-355583:-1:exon

LOC121076989
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 8869
nc RNA class: lncRNA
gene: LOC121076989
product: uncharacterized LOC121076989, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 long SRA reads, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XR_005823838.1
SIO_010081: LOC121076989
subclass of: SO_0000673
so part of: LOC121076989
location: complement(join(244622..253428,255566..255655,256030..256287,259229..259375,282872..282983,288130..288197,309240..312101,313474..313557,337693..337803,355337..355583))
location: region:244622-355583:-1
so has part: feature:355337-355583:-1:exon
so has part: feature:337693-337803:-1:exon
so has part: feature:313474-313557:-1:exon
so has part: feature:309240-312101:-1:exon
so has part: feature:288130-288197:-1:exon
so has part: feature:282872-282983:-1:exon
so has part: feature:259229-259375:-1:exon
so has part: feature:256030-256287:-1:exon
so has part: feature:255566-255655:-1:exon
so has part: feature:244622-253428:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:355337-355583:-1:exon

position:355337:-1
position: 355337
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:337693-337803:-1:exon

position:337693:-1
position: 337693
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:337803:-1
position: 337803
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:313474-313557:-1:exon

position:313474:-1
position: 313474
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:313557:-1
position: 313557
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:309240-312101:-1:exon

position:309240:-1
position: 309240
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:312101:-1
position: 312101
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:288130-288197:-1:exon

position:288130:-1
position: 288130
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:288197:-1
position: 288197
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:282872-282983:-1:exon

position:282872:-1
position: 282872
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:282983:-1
position: 282983
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:259229-259375:-1:exon

position:259229:-1
position: 259229
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:259375:-1
position: 259375
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:256030-256287:-1:exon

position:256030:-1
position: 256030
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:256287:-1
position: 256287
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:255566-255655:-1:exon

position:255566:-1
position: 255566
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:255655:-1
position: 255655
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:244622-253428:-1:exon

position:253428:-1
position: 253428
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC121076989
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 8869
nc RNA class: lncRNA
gene: LOC121076989
product: uncharacterized LOC121076989, transcript variant X9
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XR_005823846.1
SIO_010081: LOC121076989
subclass of: SO_0000673
so part of: LOC121076989
location: complement(join(244622..253428,255566..255655,256030..256287,259229..259375,282872..282983,288130..288197,309240..309566,311363..312101,313474..313557,337693..337803,343337..343508,355337..355583))
location: region:244622-355583:-1
so has part: feature:355337-355583:-1:exon
so has part: feature:343337-343508:-1:exon
so has part: feature:337693-337803:-1:exon
so has part: feature:313474-313557:-1:exon
so has part: feature:311363-312101:-1:exon
so has part: feature:309240-309566:-1:exon
so has part: feature:288130-288197:-1:exon
so has part: feature:282872-282983:-1:exon
so has part: feature:259229-259375:-1:exon
so has part: feature:256030-256287:-1:exon
so has part: feature:255566-255655:-1:exon
so has part: feature:244622-253428:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:355337-355583:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:343337-343508:-1:exon

position:343337:-1
position: 343337
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:343508:-1
position: 343508
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:337693-337803:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:313474-313557:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:311363-312101:-1:exon

position:311363:-1
position: 311363
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:309240-309566:-1:exon

position:309566:-1
position: 309566
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:288130-288197:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:282872-282983:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:259229-259375:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:256030-256287:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:255566-255655:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:244622-253428:-1:exon

LOC121076989
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 8869
nc RNA class: lncRNA
gene: LOC121076989
product: uncharacterized LOC121076989, transcript variant X13
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 long SRA read, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XR_005823850.1
SIO_010081: LOC121076989
subclass of: SO_0000673
so part of: LOC121076989
location: complement(join(244622..253428,255566..255655,256030..256282,259229..259375,282872..282983,288130..288197,309240..312101,313474..313557,337693..337803,343337..343508,355337..355583))
location: region:244622-355583:-1
so has part: feature:355337-355583:-1:exon
so has part: feature:343337-343508:-1:exon
so has part: feature:337693-337803:-1:exon
so has part: feature:313474-313557:-1:exon
so has part: feature:309240-312101:-1:exon
so has part: feature:288130-288197:-1:exon
so has part: feature:282872-282983:-1:exon
so has part: feature:259229-259375:-1:exon
so has part: feature:256030-256282:-1:exon
so has part: feature:255566-255655:-1:exon
so has part: feature:244622-253428:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:355337-355583:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:343337-343508:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:337693-337803:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:313474-313557:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:309240-312101:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:288130-288197:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:282872-282983:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:259229-259375:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:256030-256282:-1:exon

position:256282:-1
position: 256282
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:255566-255655:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:244622-253428:-1:exon

LOC121076989
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 8869
nc RNA class: lncRNA
gene: LOC121076989
product: uncharacterized LOC121076989, transcript variant X6
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 long SRA read, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XR_005823843.1
SIO_010081: LOC121076989
subclass of: SO_0000673
so part of: LOC121076989
location: complement(join(244622..253428,256030..256287,259229..259375,282872..282983,288130..288197,309240..312101,313474..313557,337693..337803,343337..343508,355337..355583))
location: region:244622-355583:-1
so has part: feature:355337-355583:-1:exon
so has part: feature:343337-343508:-1:exon
so has part: feature:337693-337803:-1:exon
so has part: feature:313474-313557:-1:exon
so has part: feature:309240-312101:-1:exon
so has part: feature:288130-288197:-1:exon
so has part: feature:282872-282983:-1:exon
so has part: feature:259229-259375:-1:exon
so has part: feature:256030-256287:-1:exon
so has part: feature:244622-253428:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:355337-355583:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:343337-343508:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:337693-337803:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:313474-313557:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:309240-312101:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:288130-288197:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:282872-282983:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:259229-259375:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:256030-256287:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:244622-253428:-1:exon

LOC121076989
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 8869
nc RNA class: lncRNA
gene: LOC121076989
product: uncharacterized LOC121076989, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 long SRA read, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XR_005823839.1
SIO_010081: LOC121076989
subclass of: SO_0000673
so part of: LOC121076989
location: complement(join(244622..253428,255566..255655,256030..256287,259229..259375,282872..282983,288130..288197,309240..312101,313474..313557,337693..337803,343337..343508,355337..355583))
location: region:244622-355583:-1
so has part: feature:355337-355583:-1:exon
so has part: feature:343337-343508:-1:exon
so has part: feature:337693-337803:-1:exon
so has part: feature:313474-313557:-1:exon
so has part: feature:309240-312101:-1:exon
so has part: feature:288130-288197:-1:exon
so has part: feature:282872-282983:-1:exon
so has part: feature:259229-259375:-1:exon
so has part: feature:256030-256287:-1:exon
so has part: feature:255566-255655:-1:exon
so has part: feature:244622-253428:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:355337-355583:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:343337-343508:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:337693-337803:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:313474-313557:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:309240-312101:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:288130-288197:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:282872-282983:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:259229-259375:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:256030-256287:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:255566-255655:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:244622-253428:-1:exon

LOC121076989
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 8869
nc RNA class: lncRNA
gene: LOC121076989
product: uncharacterized LOC121076989, transcript variant X8
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 long SRA read, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XR_005823845.1
SIO_010081: LOC121076989
subclass of: SO_0000673
so part of: LOC121076989
location: complement(join(244622..253428,255566..255655,256030..256287,259229..259375,282872..282983,284936..286973,288130..288197,309240..312101,313474..313557,337693..337803,343337..343508,355337..355583))
location: region:244622-355583:-1
so has part: feature:355337-355583:-1:exon
so has part: feature:343337-343508:-1:exon
so has part: feature:337693-337803:-1:exon
so has part: feature:313474-313557:-1:exon
so has part: feature:309240-312101:-1:exon
so has part: feature:288130-288197:-1:exon
so has part: feature:284936-286973:-1:exon
so has part: feature:282872-282983:-1:exon
so has part: feature:259229-259375:-1:exon
so has part: feature:256030-256287:-1:exon
so has part: feature:255566-255655:-1:exon
so has part: feature:244622-253428:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:355337-355583:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:343337-343508:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:337693-337803:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:313474-313557:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:309240-312101:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:288130-288197:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:284936-286973:-1:exon

position:284936:-1
position: 284936
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:286973:-1
position: 286973
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:282872-282983:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:259229-259375:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:256030-256287:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:255566-255655:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:244622-253428:-1:exon

LOC121076989
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 8869
nc RNA class: lncRNA
gene: LOC121076989
product: uncharacterized LOC121076989, transcript variant X7
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 long SRA read, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XR_005823844.1
SIO_010081: LOC121076989
subclass of: SO_0000673
so part of: LOC121076989
location: complement(join(244622..253428,255566..255655,256030..256287,259229..259375,282872..282983,284936..288197,309240..312101,313474..313557,337693..337803,343337..343508,355337..355583))
location: region:244622-355583:-1
so has part: feature:355337-355583:-1:exon
so has part: feature:343337-343508:-1:exon
so has part: feature:337693-337803:-1:exon
so has part: feature:313474-313557:-1:exon
so has part: feature:309240-312101:-1:exon
so has part: feature:284936-288197:-1:exon
so has part: feature:282872-282983:-1:exon
so has part: feature:259229-259375:-1:exon
so has part: feature:256030-256287:-1:exon
so has part: feature:255566-255655:-1:exon
so has part: feature:244622-253428:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:355337-355583:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:343337-343508:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:337693-337803:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:313474-313557:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:309240-312101:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:284936-288197:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:282872-282983:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:259229-259375:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:256030-256287:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:255566-255655:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:244622-253428:-1:exon

LOC121076989
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 8869
nc RNA class: lncRNA
gene: LOC121076989
product: uncharacterized LOC121076989, transcript variant X12
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 long SRA read, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XR_005823849.1
SIO_010081: LOC121076989
subclass of: SO_0000673
so part of: LOC121076989
location: complement(join(244622..253428,255566..255655,256030..256287,259229..259375,282872..282983,288130..288197,309240..312101,313474..313557,324788..324976,326455..326555,337693..337803,343337..343508,355337..355583))
location: region:244622-355583:-1
so has part: feature:355337-355583:-1:exon
so has part: feature:343337-343508:-1:exon
so has part: feature:337693-337803:-1:exon
so has part: feature:326455-326555:-1:exon
so has part: feature:324788-324976:-1:exon
so has part: feature:313474-313557:-1:exon
so has part: feature:309240-312101:-1:exon
so has part: feature:288130-288197:-1:exon
so has part: feature:282872-282983:-1:exon
so has part: feature:259229-259375:-1:exon
so has part: feature:256030-256287:-1:exon
so has part: feature:255566-255655:-1:exon
so has part: feature:244622-253428:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:355337-355583:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:343337-343508:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:337693-337803:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:326455-326555:-1:exon

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position:326555:-1
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urn:…
SIO_000300: 5
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position:324976:-1
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urn:…
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SIO_000628: feature:313474-313557:-1:exon

urn:…
SIO_000300: 7
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urn:…
SIO_000300: 8
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urn:…
SIO_000300: 9
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urn:…
SIO_000300: 10
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urn:…
SIO_000300: 12
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urn:…
SIO_000300: 13
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LOC121076989
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 8869
nc RNA class: lncRNA
gene: LOC121076989
product: uncharacterized LOC121076989, transcript variant X16
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 long SRA read, and 100% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XR_005823853.1
SIO_010081: LOC121076989
subclass of: SO_0000673
so part of: LOC121076989
location: complement(join(244622..253428,255566..255655,256030..256287,259229..259375,282872..282983,288130..288197,309240..312101,313474..313557,320053..320195,321965..322786,323098..323157,324321..324437,324788..324976,326455..326555,337693..337803,343337..343508,355337..355583))
location: region:244622-355583:-1
so has part: feature:355337-355583:-1:exon
so has part: feature:343337-343508:-1:exon
so has part: feature:337693-337803:-1:exon
so has part: feature:326455-326555:-1:exon
so has part: feature:324788-324976:-1:exon
so has part: feature:324321-324437:-1:exon
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so has part: feature:321965-322786:-1:exon
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so has part: feature:313474-313557:-1:exon
so has part: feature:309240-312101:-1:exon
so has part: feature:288130-288197:-1:exon
so has part: feature:282872-282983:-1:exon
so has part: feature:259229-259375:-1:exon
so has part: feature:256030-256287:-1:exon
so has part: feature:255566-255655:-1:exon
so has part: feature:244622-253428:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:355337-355583:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:343337-343508:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:337693-337803:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:326455-326555:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:324788-324976:-1:exon

urn:…
SIO_000300: 6
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position:324321:-1
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reference: sequence
type: ReverseStrandPosition
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position:324437:-1
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reference: sequence
type: ReverseStrandPosition
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urn:…
SIO_000300: 7
SIO_000628: feature:323098-323157:-1:exon

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reference: sequence
type: ReverseStrandPosition
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position:323157:-1
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reference: sequence
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urn:…
SIO_000300: 8
SIO_000628: feature:321965-322786:-1:exon

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reference: sequence
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position:322786:-1
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urn:…
SIO_000300: 9
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reference: sequence
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reference: sequence
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urn:…
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SIO_000628: feature:313474-313557:-1:exon

urn:…
SIO_000300: 11
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urn:…
SIO_000300: 12
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urn:…
SIO_000300: 13
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urn:…
SIO_000300: 14
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urn:…
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urn:…
SIO_000300: 17
SIO_000628: feature:244622-253428:-1:exon

LOC121076989
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 8869
nc RNA class: lncRNA
gene: LOC121076989
product: uncharacterized LOC121076989, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 long SRA read, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XR_005823841.1
SIO_010081: LOC121076989
subclass of: SO_0000673
so part of: LOC121076989
location: complement(join(244622..253428,255566..255655,256030..256287,259229..259375,282872..282983,288130..288197,309240..312101,313474..313557,337693..337803,355245..355583))
location: region:244622-355583:-1
so has part: feature:355245-355583:-1:exon
so has part: feature:337693-337803:-1:exon
so has part: feature:313474-313557:-1:exon
so has part: feature:309240-312101:-1:exon
so has part: feature:288130-288197:-1:exon
so has part: feature:282872-282983:-1:exon
so has part: feature:259229-259375:-1:exon
so has part: feature:256030-256287:-1:exon
so has part: feature:255566-255655:-1:exon
so has part: feature:244622-253428:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:355245-355583:-1:exon

position:355245:-1
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reference: sequence
type: ReverseStrandPosition
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urn:…
SIO_000300: 2
SIO_000628: feature:337693-337803:-1:exon

urn:…
SIO_000300: 3
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urn:…
SIO_000300: 4
SIO_000628: feature:309240-312101:-1:exon

urn:…
SIO_000300: 5
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urn:…
SIO_000300: 6
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urn:…
SIO_000300: 7
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urn:…
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urn:…
SIO_000300: 9
SIO_000628: feature:255566-255655:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:244622-253428:-1:exon

LOC121076989
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 8869
nc RNA class: lncRNA
gene: LOC121076989
product: uncharacterized LOC121076989, transcript variant X5
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 long SRA read, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XR_005823842.1
SIO_010081: LOC121076989
subclass of: SO_0000673
so part of: LOC121076989
location: complement(join(244622..253428,255566..255655,256030..256287,259229..259375,282872..282983,288130..288197,309240..312101,313474..313557,337693..337803,343337..343508,355245..355583))
location: region:244622-355583:-1
so has part: feature:355245-355583:-1:exon
so has part: feature:343337-343508:-1:exon
so has part: feature:337693-337803:-1:exon
so has part: feature:313474-313557:-1:exon
so has part: feature:309240-312101:-1:exon
so has part: feature:288130-288197:-1:exon
so has part: feature:282872-282983:-1:exon
so has part: feature:259229-259375:-1:exon
so has part: feature:256030-256287:-1:exon
so has part: feature:255566-255655:-1:exon
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urn:…
SIO_000300: 1
SIO_000628: feature:355245-355583:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:343337-343508:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:337693-337803:-1:exon

urn:…
SIO_000300: 4
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urn:…
SIO_000300: 5
SIO_000628: feature:309240-312101:-1:exon

urn:…
SIO_000300: 6
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urn:…
SIO_000300: 7
SIO_000628: feature:282872-282983:-1:exon

urn:…
SIO_000300: 8
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urn:…
SIO_000300: 10
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urn:…
SIO_000300: 11
SIO_000628: feature:244622-253428:-1:exon

LOC121076989
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 8869
nc RNA class: lncRNA
gene: LOC121076989
product: uncharacterized LOC121076989, transcript variant X14
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 long SRA read, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XR_005823851.1
SIO_010081: LOC121076989
subclass of: SO_0000673
so part of: LOC121076989
location: complement(join(244622..253428,255566..255655,256030..256287,259229..259375,282872..282983,288130..288197,309240..312101,313474..313557,337693..337803,355235..355583))
location: region:244622-355583:-1
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so has part: feature:337693-337803:-1:exon
so has part: feature:313474-313557:-1:exon
so has part: feature:309240-312101:-1:exon
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so has part: feature:244622-253428:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:355235-355583:-1:exon

position:355235:-1
position: 355235
reference: sequence
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urn:…
SIO_000300: 2
SIO_000628: feature:337693-337803:-1:exon

urn:…
SIO_000300: 3
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urn:…
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SIO_000628: feature:244622-253428:-1:exon

LOC121076989
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 8869
nc RNA class: lncRNA
gene: LOC121076989
product: uncharacterized LOC121076989, transcript variant X15
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 long SRA read, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XR_005823852.1
SIO_010081: LOC121076989
subclass of: SO_0000673
so part of: LOC121076989
location: complement(join(244622..253428,255566..255655,256030..256287,259229..259375,282872..282983,288130..288197,309240..312101,313474..313557,337693..337803,343337..343508,345839..345924))
location: region:244622-345924:-1
so has part: feature:345839-345924:-1:exon
so has part: feature:343337-343508:-1:exon
so has part: feature:337693-337803:-1:exon
so has part: feature:313474-313557:-1:exon
so has part: feature:309240-312101:-1:exon
so has part: feature:288130-288197:-1:exon
so has part: feature:282872-282983:-1:exon
so has part: feature:259229-259375:-1:exon
so has part: feature:256030-256287:-1:exon
so has part: feature:255566-255655:-1:exon
so has part: feature:244622-253428:-1:exon

position:345924:-1
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reference: sequence
type: ReverseStrandPosition
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urn:…
SIO_000300: 1
SIO_000628: feature:345839-345924:-1:exon

position:345839:-1
position: 345839
reference: sequence
type: ReverseStrandPosition
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urn:…
SIO_000300: 2
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urn:…
SIO_000300: 3
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SIO_000300: 6
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SIO_000628: feature:255566-255655:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:244622-253428:-1:exon

LOC121076989
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 8869
nc RNA class: lncRNA
gene: LOC121076989
product: uncharacterized LOC121076989, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 long SRA read, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 6 samples with support for all annotated introns
transcript id: XR_005823840.1
SIO_010081: LOC121076989
subclass of: SO_0000673
so part of: LOC121076989
location: complement(join(267977..268500,282872..282983,288130..288197,309240..312101,313474..313557,337693..337803,343337..343508,355337..355583))
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so has part: feature:288130-288197:-1:exon
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position:267977:-1
position: 267977
reference: sequence
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urn:…
SIO_000300: 1
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urn:…
SIO_000300: 2
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position:268500:-1
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reference: sequence
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LOC121076989
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 8869
nc RNA class: lncRNA
gene: LOC121076989
product: uncharacterized LOC121076989, transcript variant X11
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 long SRA read, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XR_005823848.1
SIO_010081: LOC121076989
subclass of: SO_0000673
so part of: LOC121076989
location: complement(join(267977..268500,282872..282983,284936..288197,309240..312101,313474..313557,337693..337803,343337..343508,355337..355583))
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so has part: feature:313474-313557:-1:exon
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urn:…
SIO_000300: 1
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SIO_000300: 2
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urn:…
SIO_000300: 8
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LOC121076989
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 8869
nc RNA class: lncRNA
gene: LOC121076989
product: uncharacterized LOC121076989, transcript variant X10
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 long SRA read, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XR_005823847.1
SIO_010081: LOC121076989
subclass of: SO_0000673
so part of: LOC121076989
location: complement(join(276956..278770,282872..282983,288130..288197,309240..312101,313474..313557,337693..337803,343337..343508,355337..355583))
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position:276956:-1
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reference: sequence
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urn:…
SIO_000300: 1
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urn:…
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LOC121076989
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 8869
nc RNA class: lncRNA
gene: LOC121076989
product: uncharacterized LOC121076989, transcript variant X18
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 long SRA read, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XR_005823855.1
SIO_010081: LOC121076989
subclass of: SO_0000673
so part of: LOC121076989
location: complement(join(293225..294335,309240..312101,313474..313557,337693..337803,343337..343508,355337..355583))
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so has part: feature:313474-313557:-1:exon
so has part: feature:309240-312101:-1:exon
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position:293225:-1
position: 293225
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:355337-355583:-1:exon

urn:…
SIO_000300: 2
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urn:…
SIO_000300: 6
SIO_000628: feature:293225-294335:-1:exon

position:294335:-1
position: 294335
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC121076989
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 8869
nc RNA class: lncRNA
gene: LOC121076989
product: uncharacterized LOC121076989, transcript variant X19
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 long SRA read, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XR_005823856.1
SIO_010081: LOC121076989
subclass of: SO_0000673
so part of: LOC121076989
location: complement(join(294343..298977,299266..299309,309240..312101,313474..313557,337693..337803,343337..343508,355337..355583))
location: region:294343-355583:-1
so has part: feature:355337-355583:-1:exon
so has part: feature:343337-343508:-1:exon
so has part: feature:337693-337803:-1:exon
so has part: feature:313474-313557:-1:exon
so has part: feature:309240-312101:-1:exon
so has part: feature:299266-299309:-1:exon
so has part: feature:294343-298977:-1:exon

position:294343:-1
position: 294343
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:355337-355583:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:343337-343508:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:337693-337803:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:313474-313557:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:309240-312101:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:299266-299309:-1:exon

position:299266:-1
position: 299266
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:299309:-1
position: 299309
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:294343-298977:-1:exon

position:298977:-1
position: 298977
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC121076989
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 8869
nc RNA class: lncRNA
gene: LOC121076989
product: uncharacterized LOC121076989, transcript variant X17
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 long SRA read, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
transcript id: XR_005823854.1
SIO_010081: LOC121076989
subclass of: SO_0000673
so part of: LOC121076989
location: complement(join(294343..299309,309240..312101,313474..313557,337693..337803,343337..343508,355337..355583))
location: region:294343-355583:-1
so has part: feature:355337-355583:-1:exon
so has part: feature:343337-343508:-1:exon
so has part: feature:337693-337803:-1:exon
so has part: feature:313474-313557:-1:exon
so has part: feature:309240-312101:-1:exon
so has part: feature:294343-299309:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:355337-355583:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:343337-343508:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:337693-337803:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:313474-313557:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:309240-312101:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:294343-299309:-1:exon

LOC121076989
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 8869
nc RNA class: lncRNA
gene: LOC121076989
product: uncharacterized LOC121076989, transcript variant X20
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 long SRA read, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XR_005823857.1
SIO_010081: LOC121076989
subclass of: SO_0000673
so part of: LOC121076989
location: complement(join(302649..303451,309240..312101,313474..313557,337693..337803,343337..343508,355337..355583))
location: region:302649-355583:-1
so has part: feature:355337-355583:-1:exon
so has part: feature:343337-343508:-1:exon
so has part: feature:337693-337803:-1:exon
so has part: feature:313474-313557:-1:exon
so has part: feature:309240-312101:-1:exon
so has part: feature:302649-303451:-1:exon

position:302649:-1
position: 302649
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:355337-355583:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:343337-343508:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:337693-337803:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:313474-313557:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:309240-312101:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:302649-303451:-1:exon

position:303451:-1
position: 303451
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC121076990
type: Gene
subclass of: SO_0000704
RO_0002162: 8869
gene: LOC121076990
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(365697..368316)
location: region:365697-368316:-1
so has part: feature:365697-368316:-1:exon
subclass of: SO_0000011

121076990
type: Gene
SIO_000068: ncbigene

position:365697:-1
position: 365697
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:368316:-1
position: 368316
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:365697-368316:-1:exon

LOC121076990
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 8869
nc RNA class: lncRNA
gene: LOC121076990
product: uncharacterized LOC121076990
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XR_005823858.1
SIO_010081: LOC121076990
subclass of: SO_0000673
so part of: LOC121076990
location: complement(join(365697..365922,367156..367249,367748..368316))
location: region:365697-368316:-1
so has part: feature:367748-368316:-1:exon
so has part: feature:367156-367249:-1:exon
so has part: feature:365697-365922:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:367748-368316:-1:exon

position:367748:-1
position: 367748
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:367156-367249:-1:exon

position:367156:-1
position: 367156
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:367249:-1
position: 367249
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:365697-365922:-1:exon

position:365922:-1
position: 365922
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

ZFHX3
type: Gene
subclass of: SO_0000704
RO_0002162: 8869
gene: ZFHX3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(369273..902727)
location: region:369273-902727:-1
so has part: feature:369273-902727:-1:exon
subclass of: SO_0000010

121076974
type: Gene
SIO_000068: ncbigene

position:369273:-1
position: 369273
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:902727:-1
position: 902727
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:369273-902727:-1:exon

ZFHX3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8869
gene: ZFHX3
product: zinc finger homeobox 3, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 29 long SRA reads, 9 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_040571666.1
SIO_010081: ZFHX3
subclass of: SO_0000673
so part of: ZFHX3
location: complement(join(369273..375498,380009..385486,386852..386954,396059..396259,396457..396590,409057..409164,448678..448909,479009..479505,483031..485786,543724..544092,551435..551621,630419..630532,793327..793432,887703..887830,902554..902727))
location: region:369273-902727:-1
so has part: feature:902554-902727:-1:exon
so has part: feature:887703-887830:-1:exon
so has part: feature:793327-793432:-1:exon
so has part: feature:630419-630532:-1:exon
so has part: feature:551435-551621:-1:exon
so has part: feature:543724-544092:-1:exon
so has part: feature:483031-485786:-1:exon
so has part: feature:479009-479505:-1:exon
so has part: feature:448678-448909:-1:exon
so has part: feature:409057-409164:-1:exon
so has part: feature:396457-396590:-1:exon
so has part: feature:396059-396259:-1:exon
so has part: feature:386852-386954:-1:exon
so has part: feature:380009-385486:-1:exon
so has part: feature:369273-375498:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:902554-902727:-1:exon

position:902554:-1
position: 902554
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:887703-887830:-1:exon

position:887703:-1
position: 887703
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:887830:-1
position: 887830
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:793327-793432:-1:exon

position:793327:-1
position: 793327
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:793432:-1
position: 793432
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:630419-630532:-1:exon

position:630419:-1
position: 630419
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:630532:-1
position: 630532
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:551435-551621:-1:exon

position:551435:-1
position: 551435
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:551621:-1
position: 551621
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:543724-544092:-1:exon

position:543724:-1
position: 543724
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:544092:-1
position: 544092
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:483031-485786:-1:exon

position:483031:-1
position: 483031
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:485786:-1
position: 485786
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:479009-479505:-1:exon

position:479009:-1
position: 479009
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:479505:-1
position: 479505
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:448678-448909:-1:exon

position:448678:-1
position: 448678
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:448909:-1
position: 448909
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:409057-409164:-1:exon

position:409057:-1
position: 409057
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:409164:-1
position: 409164
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:396457-396590:-1:exon

position:396457:-1
position: 396457
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:396590:-1
position: 396590
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:396059-396259:-1:exon

position:396059:-1
position: 396059
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:396259:-1
position: 396259
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:386852-386954:-1:exon

position:386852:-1
position: 386852
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:386954:-1
position: 386954
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:380009-385486:-1:exon

position:380009:-1
position: 380009
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:385486:-1
position: 385486
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:369273-375498:-1:exon

position:375498:-1
position: 375498
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

ZFHX3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8869
gene: ZFHX3
product: zinc finger homeobox 3, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 29 long SRA reads, 9 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_040571667.1
SIO_010081: ZFHX3
subclass of: SO_0000673
so part of: ZFHX3
location: complement(join(369273..375498,380009..385486,386852..386954,396059..396259,396457..396590,409057..409164,448678..448909,479009..479505,483031..485786,543724..544092,551435..551621,554964..555574))
location: region:369273-555574:-1
so has part: feature:554964-555574:-1:exon
so has part: feature:551435-551621:-1:exon
so has part: feature:543724-544092:-1:exon
so has part: feature:483031-485786:-1:exon
so has part: feature:479009-479505:-1:exon
so has part: feature:448678-448909:-1:exon
so has part: feature:409057-409164:-1:exon
so has part: feature:396457-396590:-1:exon
so has part: feature:396059-396259:-1:exon
so has part: feature:386852-386954:-1:exon
so has part: feature:380009-385486:-1:exon
so has part: feature:369273-375498:-1:exon

position:555574:-1
position: 555574
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:554964-555574:-1:exon

position:554964:-1
position: 554964
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:551435-551621:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:543724-544092:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:483031-485786:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:479009-479505:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:448678-448909:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:409057-409164:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:396457-396590:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:396059-396259:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:386852-386954:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:380009-385486:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:369273-375498:-1:exon

ZFHX3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8869
gene: ZFHX3
product: zinc finger homeobox 3, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 27 long SRA reads, 9 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XM_040571669.1
SIO_010081: ZFHX3
subclass of: SO_0000673
so part of: ZFHX3
location: complement(join(369273..375498,380009..385486,386852..386954,396059..396259,396457..396590,409057..409164,448678..448909,479009..479505,483031..485786,543065..543179))
location: region:369273-543179:-1
so has part: feature:543065-543179:-1:exon
so has part: feature:483031-485786:-1:exon
so has part: feature:479009-479505:-1:exon
so has part: feature:448678-448909:-1:exon
so has part: feature:409057-409164:-1:exon
so has part: feature:396457-396590:-1:exon
so has part: feature:396059-396259:-1:exon
so has part: feature:386852-386954:-1:exon
so has part: feature:380009-385486:-1:exon
so has part: feature:369273-375498:-1:exon

position:543179:-1
position: 543179
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:543065-543179:-1:exon

position:543065:-1
position: 543065
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:483031-485786:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:479009-479505:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:448678-448909:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:409057-409164:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:396457-396590:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:396059-396259:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:386852-386954:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:380009-385486:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:369273-375498:-1:exon

ZFHX3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8869
gene: ZFHX3
product: zinc finger homeobox 3, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 27 long SRA reads, 9 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_040571668.1
SIO_010081: ZFHX3
subclass of: SO_0000673
so part of: ZFHX3
location: complement(join(369273..375498,380009..385486,386852..386954,396059..396259,396457..396590,409057..409164,448678..448909,479009..479505,483031..485786,500213..500328))
location: region:369273-500328:-1
so has part: feature:500213-500328:-1:exon
so has part: feature:483031-485786:-1:exon
so has part: feature:479009-479505:-1:exon
so has part: feature:448678-448909:-1:exon
so has part: feature:409057-409164:-1:exon
so has part: feature:396457-396590:-1:exon
so has part: feature:396059-396259:-1:exon
so has part: feature:386852-386954:-1:exon
so has part: feature:380009-385486:-1:exon
so has part: feature:369273-375498:-1:exon

position:500328:-1
position: 500328
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:500213-500328:-1:exon

position:500213:-1
position: 500213
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:483031-485786:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:479009-479505:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:448678-448909:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:409057-409164:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:396457-396590:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:396059-396259:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:386852-386954:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:380009-385486:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:369273-375498:-1:exon

ZFHX3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8869
gene: ZFHX3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: zinc finger homeobox protein 3
translation: MEGCDSPVIPGKDNGCGIPQHQQWTDLNSTHLPDTASSMEQPAAESRGPLDSLRVPFPERVPESSAAAGPGTEPTGKEVSCGQCAASFAGLQSYMEHRCAGARPPPPLRGESGSESSEDGDEESDVENLAGEIVYQPDGSAYIVESLSQLVQSGGACGSGSGALPSLLPNSLSKQGEPSAAAPVYPQIINTFHIASSFGKWFEGSDQAFPNTSALAGISPVLHSFRVFDVRHKSNKDYLNSDGSAKSSCVSKDVPNNVDLSKFDGFVLYGKRKPILMCFLCKLSFGYVRSFVTHAVHDHRMTLSEEERKILSNKNISAIIQGIGKDKEPLVSFLEPKNKTFQHPLVSTANLIGPGHSFYGKFSGIRMEGEQALQAGPAGGAEPPPSGVLAPGTLLNLGGLTSSALKTPITSVPLGPLASSPTKSSEGKDPGVAEGEKQEGGDQDSLCEKAEPVEEVEEEEEEEVEEEEEEEEEEEEEEDEDDEGCKGLFPSELEDELEDRPQEDSGAVAGGGSSSSKKDLALSNQSISNSPLMPNVLQTLSRGTASTSSNSASSFVFDGANRRNHLSFNNEGGGANVAEGSRRLDFIDESANKDNATAPEPNESTEGEDGSYISHHQHAGPLCELGGGECPSGSGVECPKCDTVLGSSRSLGGHMTMMHSRNSCKTLKCPKCNWHYKYQQTLEAHMKEKHPEPGGSCVYCKSGQPHPRLARGESYTCGYKPFRCEVCNYSTTTKGNLSIHMQSDKHLNNMQNLQNGGGEQVFSHTAGAAAAAAAAAAAAAANIGSTCGAPSPTKPKTKPTWRCEVCDYETNVARNLRIHMTSEKHMHNMMLLQQNMSQIQHNRHLGLSSLPSPAEAELYQYYLAQNMNLPNLKMDSTSSDAQFMMGGFQLDPTNPMATMTPSLVGGEIPLDMRLGGGQLVSEELMNLGESFTQTNDPSLKLFQCAVCNKFTTDNLDMLGLHMNVERSLPEDEWKAVMGDSYQCKLCRYNTQLKANFQLHCKTDKHVQKYQLVAHIKEGGKANEWRLKCVAIGNPVHLKCNACDYYTNSLEKLRLHTVNSRHEASLKLYKHLQHHESGVEGESCYYHCVLCNYSTKAKLNLIQHVRSMKHQRSESLRKLQRLQKGLPEEEEDLGQIFTIRKCPAADAEEAIEDVEGPNETAVDAEEPAKEQESGGDKDQSKWTASASQAEKELTEPPASSKRISFPSSSESPLSFKWSKTSEETKSEQMYQCPYCKYSNTDVNRLRVHAMTQHSVQPMLRCPLCQDMLNNKIHLQLHLTHLHSVSPDCVEKLIMTVTTPEVMMPSSMFLPAATPEKDGNSTTEELGKQPEISEDSGKSLLPSEGAEHSSDPKPVAADQSSARDDSGFLCWKKGCNQVFKSSAALQTHFNEVHAKRPQLPVSDRHVYKYRCNQCSLAFKTIEKLQLHSQYHVIRAATMCCLCQRSFRTFQALKKHLETSHLELSEADIQQLYGGLLVNGDLLAMGDPSLAEDHTIIVEEDKEEESDLEDKQSPTGSDSGSVQEDSGSEPKRALPFRKGPNFTMEKFLDPSRPYKCTVCKESFTQKNILLVHYNSVSHLHKLKRALQESATGQPEPTSSPDNKPFKCNTCNVAYSQSSTLEIHMRSVLHQTKARAAKLEAAGGSGSSNGAGNSSSSSLSLGSSTPSPVSTSNNNTYTTTNTSNSGTTPIPSLLNQVSSDSLGIAPIGNPVSTNISSPSEPKEVNRKKLADMIASRQQQQQQQQQQQQQQQQQQQQQQQAQTLAQAQAQVQAHLQQELQQQAALLQSQLFNPALLPHFPMTTETLLQLQQQQHLLFPFYIPSAEFQLNPEVSLPVTSGALTLTGTGPSLLEDLKAQVQLPQQSHPQLLQQQQGQLSLSQPHVLIQQSQHPEKKNKSVVKEKEKETPRERESAERGDNNAASKESLPDNLKPKDKKDFVPGGNSEPSLLPPRIASDARGNATKALLENFGFELVIQYNENKQKVQKKNGKAEQGENLEKLECDTC…
SIO_010081: ZFHX3
subclass of: SO_0000673
so part of: ZFHX3
location: complement(join(373925..375498,380009..385486,386852..386954,396059..396259,396457..396590,409057..409164,448678..448909,479009..479505,483031..485740))
location: region:373925-485740:-1
so has part: feature:483031-485740:-1:exon
so has part: feature:479009-479505:-1:exon
so has part: feature:448678-448909:-1:exon
so has part: feature:409057-409164:-1:exon
so has part: feature:396457-396590:-1:exon
so has part: feature:396059-396259:-1:exon
so has part: feature:386852-386954:-1:exon
so has part: feature:380009-385486:-1:exon
so has part: feature:373925-375498:-1:exon

XP_040427600.1
type: Protein
SIO_000068: ncbiprotein

position:373925:-1
position: 373925
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:485740:-1
position: 485740
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:483031-485740:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:479009-479505:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:448678-448909:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:409057-409164:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:396457-396590:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:396059-396259:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:386852-386954:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:380009-385486:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:373925-375498:-1:exon

ZFHX3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8869
gene: ZFHX3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: zinc finger homeobox protein 3
translation: MEGCDSPVIPGKDNGCGIPQHQQWTDLNSTHLPDTASSMEQPAAESRGPLDSLRVPFPERVPESSAAAGPGTEPTGKEVSCGQCAASFAGLQSYMEHRCAGARPPPPLRGESGSESSEDGDEESDVENLAGEIVYQPDGSAYIVESLSQLVQSGGACGSGSGALPSLLPNSLSKQGEPSAAAPVYPQIINTFHIASSFGKWFEGSDQAFPNTSALAGISPVLHSFRVFDVRHKSNKDYLNSDGSAKSSCVSKDVPNNVDLSKFDGFVLYGKRKPILMCFLCKLSFGYVRSFVTHAVHDHRMTLSEEERKILSNKNISAIIQGIGKDKEPLVSFLEPKNKTFQHPLVSTANLIGPGHSFYGKFSGIRMEGEQALQAGPAGGAEPPPSGVLAPGTLLNLGGLTSSALKTPITSVPLGPLASSPTKSSEGKDPGVAEGEKQEGGDQDSLCEKAEPVEEVEEEEEEEVEEEEEEEEEEEEEEDEDDEGCKGLFPSELEDELEDRPQEDSGAVAGGGSSSSKKDLALSNQSISNSPLMPNVLQTLSRGTASTSSNSASSFVFDGANRRNHLSFNNEGGGANVAEGSRRLDFIDESANKDNATAPEPNESTEGEDGSYISHHQHAGPLCELGGGECPSGSGVECPKCDTVLGSSRSLGGHMTMMHSRNSCKTLKCPKCNWHYKYQQTLEAHMKEKHPEPGGSCVYCKSGQPHPRLARGESYTCGYKPFRCEVCNYSTTTKGNLSIHMQSDKHLNNMQNLQNGGGEQVFSHTAGAAAAAAAAAAAAAANIGSTCGAPSPTKPKTKPTWRCEVCDYETNVARNLRIHMTSEKHMHNMMLLQQNMSQIQHNRHLGLSSLPSPAEAELYQYYLAQNMNLPNLKMDSTSSDAQFMMGGFQLDPTNPMATMTPSLVGGEIPLDMRLGGGQLVSEELMNLGESFTQTNDPSLKLFQCAVCNKFTTDNLDMLGLHMNVERSLPEDEWKAVMGDSYQCKLCRYNTQLKANFQLHCKTDKHVQKYQLVAHIKEGGKANEWRLKCVAIGNPVHLKCNACDYYTNSLEKLRLHTVNSRHEASLKLYKHLQHHESGVEGESCYYHCVLCNYSTKAKLNLIQHVRSMKHQRSESLRKLQRLQKGLPEEEEDLGQIFTIRKCPAADAEEAIEDVEGPNETAVDAEEPAKEQESGGDKDQSKWTASASQAEKELTEPPASSKRISFPSSSESPLSFKWSKTSEETKSEQMYQCPYCKYSNTDVNRLRVHAMTQHSVQPMLRCPLCQDMLNNKIHLQLHLTHLHSVSPDCVEKLIMTVTTPEVMMPSSMFLPAATPEKDGNSTTEELGKQPEISEDSGKSLLPSEGAEHSSDPKPVAADQSSARDDSGFLCWKKGCNQVFKSSAALQTHFNEVHAKRPQLPVSDRHVYKYRCNQCSLAFKTIEKLQLHSQYHVIRAATMCCLCQRSFRTFQALKKHLETSHLELSEADIQQLYGGLLVNGDLLAMGDPSLAEDHTIIVEEDKEEESDLEDKQSPTGSDSGSVQEDSGSEPKRALPFRKGPNFTMEKFLDPSRPYKCTVCKESFTQKNILLVHYNSVSHLHKLKRALQESATGQPEPTSSPDNKPFKCNTCNVAYSQSSTLEIHMRSVLHQTKARAAKLEAAGGSGSSNGAGNSSSSSLSLGSSTPSPVSTSNNNTYTTTNTSNSGTTPIPSLLNQVSSDSLGIAPIGNPVSTNISSPSEPKEVNRKKLADMIASRQQQQQQQQQQQQQQQQQQQQQQQAQTLAQAQAQVQAHLQQELQQQAALLQSQLFNPALLPHFPMTTETLLQLQQQQHLLFPFYIPSAEFQLNPEVSLPVTSGALTLTGTGPSLLEDLKAQVQLPQQSHPQLLQQQQGQLSLSQPHVLIQQSQHPEKKNKSVVKEKEKETPRERESAERGDNNAASKESLPDNLKPKDKKDFVPGGNSEPSLLPPRIASDARGNATKALLENFGFELVIQYNENKQKVQKKNGKAEQGENLEKLECDTC…
SIO_010081: ZFHX3
subclass of: SO_0000673
so part of: ZFHX3
location: complement(join(373925..375498,380009..385486,386852..386954,396059..396259,396457..396590,409057..409164,448678..448909,479009..479505,483031..485740))
location: region:373925-485740:-1
so has part: feature:483031-485740:-1:exon
so has part: feature:479009-479505:-1:exon
so has part: feature:448678-448909:-1:exon
so has part: feature:409057-409164:-1:exon
so has part: feature:396457-396590:-1:exon
so has part: feature:396059-396259:-1:exon
so has part: feature:386852-386954:-1:exon
so has part: feature:380009-385486:-1:exon
so has part: feature:373925-375498:-1:exon

XP_040427601.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:483031-485740:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:479009-479505:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:448678-448909:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:409057-409164:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:396457-396590:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:396059-396259:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:386852-386954:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:380009-385486:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:373925-375498:-1:exon

ZFHX3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8869
gene: ZFHX3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: zinc finger homeobox protein 3
translation: MEGCDSPVIPGKDNGCGIPQHQQWTDLNSTHLPDTASSMEQPAAESRGPLDSLRVPFPERVPESSAAAGPGTEPTGKEVSCGQCAASFAGLQSYMEHRCAGARPPPPLRGESGSESSEDGDEESDVENLAGEIVYQPDGSAYIVESLSQLVQSGGACGSGSGALPSLLPNSLSKQGEPSAAAPVYPQIINTFHIASSFGKWFEGSDQAFPNTSALAGISPVLHSFRVFDVRHKSNKDYLNSDGSAKSSCVSKDVPNNVDLSKFDGFVLYGKRKPILMCFLCKLSFGYVRSFVTHAVHDHRMTLSEEERKILSNKNISAIIQGIGKDKEPLVSFLEPKNKTFQHPLVSTANLIGPGHSFYGKFSGIRMEGEQALQAGPAGGAEPPPSGVLAPGTLLNLGGLTSSALKTPITSVPLGPLASSPTKSSEGKDPGVAEGEKQEGGDQDSLCEKAEPVEEVEEEEEEEVEEEEEEEEEEEEEEDEDDEGCKGLFPSELEDELEDRPQEDSGAVAGGGSSSSKKDLALSNQSISNSPLMPNVLQTLSRGTASTSSNSASSFVFDGANRRNHLSFNNEGGGANVAEGSRRLDFIDESANKDNATAPEPNESTEGEDGSYISHHQHAGPLCELGGGECPSGSGVECPKCDTVLGSSRSLGGHMTMMHSRNSCKTLKCPKCNWHYKYQQTLEAHMKEKHPEPGGSCVYCKSGQPHPRLARGESYTCGYKPFRCEVCNYSTTTKGNLSIHMQSDKHLNNMQNLQNGGGEQVFSHTAGAAAAAAAAAAAAAANIGSTCGAPSPTKPKTKPTWRCEVCDYETNVARNLRIHMTSEKHMHNMMLLQQNMSQIQHNRHLGLSSLPSPAEAELYQYYLAQNMNLPNLKMDSTSSDAQFMMGGFQLDPTNPMATMTPSLVGGEIPLDMRLGGGQLVSEELMNLGESFTQTNDPSLKLFQCAVCNKFTTDNLDMLGLHMNVERSLPEDEWKAVMGDSYQCKLCRYNTQLKANFQLHCKTDKHVQKYQLVAHIKEGGKANEWRLKCVAIGNPVHLKCNACDYYTNSLEKLRLHTVNSRHEASLKLYKHLQHHESGVEGESCYYHCVLCNYSTKAKLNLIQHVRSMKHQRSESLRKLQRLQKGLPEEEEDLGQIFTIRKCPAADAEEAIEDVEGPNETAVDAEEPAKEQESGGDKDQSKWTASASQAEKELTEPPASSKRISFPSSSESPLSFKWSKTSEETKSEQMYQCPYCKYSNTDVNRLRVHAMTQHSVQPMLRCPLCQDMLNNKIHLQLHLTHLHSVSPDCVEKLIMTVTTPEVMMPSSMFLPAATPEKDGNSTTEELGKQPEISEDSGKSLLPSEGAEHSSDPKPVAADQSSARDDSGFLCWKKGCNQVFKSSAALQTHFNEVHAKRPQLPVSDRHVYKYRCNQCSLAFKTIEKLQLHSQYHVIRAATMCCLCQRSFRTFQALKKHLETSHLELSEADIQQLYGGLLVNGDLLAMGDPSLAEDHTIIVEEDKEEESDLEDKQSPTGSDSGSVQEDSGSEPKRALPFRKGPNFTMEKFLDPSRPYKCTVCKESFTQKNILLVHYNSVSHLHKLKRALQESATGQPEPTSSPDNKPFKCNTCNVAYSQSSTLEIHMRSVLHQTKARAAKLEAAGGSGSSNGAGNSSSSSLSLGSSTPSPVSTSNNNTYTTTNTSNSGTTPIPSLLNQVSSDSLGIAPIGNPVSTNISSPSEPKEVNRKKLADMIASRQQQQQQQQQQQQQQQQQQQQQQQAQTLAQAQAQVQAHLQQELQQQAALLQSQLFNPALLPHFPMTTETLLQLQQQQHLLFPFYIPSAEFQLNPEVSLPVTSGALTLTGTGPSLLEDLKAQVQLPQQSHPQLLQQQQGQLSLSQPHVLIQQSQHPEKKNKSVVKEKEKETPRERESAERGDNNAASKESLPDNLKPKDKKDFVPGGNSEPSLLPPRIASDARGNATKALLENFGFELVIQYNENKQKVQKKNGKAEQGENLEKLECDTC…
SIO_010081: ZFHX3
subclass of: SO_0000673
so part of: ZFHX3
location: complement(join(373925..375498,380009..385486,386852..386954,396059..396259,396457..396590,409057..409164,448678..448909,479009..479505,483031..485740))
location: region:373925-485740:-1
so has part: feature:483031-485740:-1:exon
so has part: feature:479009-479505:-1:exon
so has part: feature:448678-448909:-1:exon
so has part: feature:409057-409164:-1:exon
so has part: feature:396457-396590:-1:exon
so has part: feature:396059-396259:-1:exon
so has part: feature:386852-386954:-1:exon
so has part: feature:380009-385486:-1:exon
so has part: feature:373925-375498:-1:exon

XP_040427602.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:483031-485740:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:479009-479505:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:448678-448909:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:409057-409164:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:396457-396590:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:396059-396259:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:386852-386954:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:380009-385486:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:373925-375498:-1:exon

ZFHX3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8869
gene: ZFHX3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: zinc finger homeobox protein 3
translation: MEGCDSPVIPGKDNGCGIPQHQQWTDLNSTHLPDTASSMEQPAAESRGPLDSLRVPFPERVPESSAAAGPGTEPTGKEVSCGQCAASFAGLQSYMEHRCAGARPPPPLRGESGSESSEDGDEESDVENLAGEIVYQPDGSAYIVESLSQLVQSGGACGSGSGALPSLLPNSLSKQGEPSAAAPVYPQIINTFHIASSFGKWFEGSDQAFPNTSALAGISPVLHSFRVFDVRHKSNKDYLNSDGSAKSSCVSKDVPNNVDLSKFDGFVLYGKRKPILMCFLCKLSFGYVRSFVTHAVHDHRMTLSEEERKILSNKNISAIIQGIGKDKEPLVSFLEPKNKTFQHPLVSTANLIGPGHSFYGKFSGIRMEGEQALQAGPAGGAEPPPSGVLAPGTLLNLGGLTSSALKTPITSVPLGPLASSPTKSSEGKDPGVAEGEKQEGGDQDSLCEKAEPVEEVEEEEEEEVEEEEEEEEEEEEEEDEDDEGCKGLFPSELEDELEDRPQEDSGAVAGGGSSSSKKDLALSNQSISNSPLMPNVLQTLSRGTASTSSNSASSFVFDGANRRNHLSFNNEGGGANVAEGSRRLDFIDESANKDNATAPEPNESTEGEDGSYISHHQHAGPLCELGGGECPSGSGVECPKCDTVLGSSRSLGGHMTMMHSRNSCKTLKCPKCNWHYKYQQTLEAHMKEKHPEPGGSCVYCKSGQPHPRLARGESYTCGYKPFRCEVCNYSTTTKGNLSIHMQSDKHLNNMQNLQNGGGEQVFSHTAGAAAAAAAAAAAAAANIGSTCGAPSPTKPKTKPTWRCEVCDYETNVARNLRIHMTSEKHMHNMMLLQQNMSQIQHNRHLGLSSLPSPAEAELYQYYLAQNMNLPNLKMDSTSSDAQFMMGGFQLDPTNPMATMTPSLVGGEIPLDMRLGGGQLVSEELMNLGESFTQTNDPSLKLFQCAVCNKFTTDNLDMLGLHMNVERSLPEDEWKAVMGDSYQCKLCRYNTQLKANFQLHCKTDKHVQKYQLVAHIKEGGKANEWRLKCVAIGNPVHLKCNACDYYTNSLEKLRLHTVNSRHEASLKLYKHLQHHESGVEGESCYYHCVLCNYSTKAKLNLIQHVRSMKHQRSESLRKLQRLQKGLPEEEEDLGQIFTIRKCPAADAEEAIEDVEGPNETAVDAEEPAKEQESGGDKDQSKWTASASQAEKELTEPPASSKRISFPSSSESPLSFKWSKTSEETKSEQMYQCPYCKYSNTDVNRLRVHAMTQHSVQPMLRCPLCQDMLNNKIHLQLHLTHLHSVSPDCVEKLIMTVTTPEVMMPSSMFLPAATPEKDGNSTTEELGKQPEISEDSGKSLLPSEGAEHSSDPKPVAADQSSARDDSGFLCWKKGCNQVFKSSAALQTHFNEVHAKRPQLPVSDRHVYKYRCNQCSLAFKTIEKLQLHSQYHVIRAATMCCLCQRSFRTFQALKKHLETSHLELSEADIQQLYGGLLVNGDLLAMGDPSLAEDHTIIVEEDKEEESDLEDKQSPTGSDSGSVQEDSGSEPKRALPFRKGPNFTMEKFLDPSRPYKCTVCKESFTQKNILLVHYNSVSHLHKLKRALQESATGQPEPTSSPDNKPFKCNTCNVAYSQSSTLEIHMRSVLHQTKARAAKLEAAGGSGSSNGAGNSSSSSLSLGSSTPSPVSTSNNNTYTTTNTSNSGTTPIPSLLNQVSSDSLGIAPIGNPVSTNISSPSEPKEVNRKKLADMIASRQQQQQQQQQQQQQQQQQQQQQQQAQTLAQAQAQVQAHLQQELQQQAALLQSQLFNPALLPHFPMTTETLLQLQQQQHLLFPFYIPSAEFQLNPEVSLPVTSGALTLTGTGPSLLEDLKAQVQLPQQSHPQLLQQQQGQLSLSQPHVLIQQSQHPEKKNKSVVKEKEKETPRERESAERGDNNAASKESLPDNLKPKDKKDFVPGGNSEPSLLPPRIASDARGNATKALLENFGFELVIQYNENKQKVQKKNGKAEQGENLEKLECDTC…
SIO_010081: ZFHX3
subclass of: SO_0000673
so part of: ZFHX3
location: complement(join(373925..375498,380009..385486,386852..386954,396059..396259,396457..396590,409057..409164,448678..448909,479009..479505,483031..485740))
location: region:373925-485740:-1
so has part: feature:483031-485740:-1:exon
so has part: feature:479009-479505:-1:exon
so has part: feature:448678-448909:-1:exon
so has part: feature:409057-409164:-1:exon
so has part: feature:396457-396590:-1:exon
so has part: feature:396059-396259:-1:exon
so has part: feature:386852-386954:-1:exon
so has part: feature:380009-385486:-1:exon
so has part: feature:373925-375498:-1:exon

XP_040427603.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:483031-485740:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:479009-479505:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:448678-448909:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:409057-409164:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:396457-396590:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:396059-396259:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:386852-386954:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:380009-385486:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:373925-375498:-1:exon

LOC121076991
type: Gene
subclass of: SO_0000704
RO_0002162: 8869
gene: LOC121076991
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 829566..831863
location: region:829566-831863:1
so has part: feature:829566-831863:1:exon
subclass of: SO_0000011

121076991
type: Gene
SIO_000068: ncbigene

position:829566:1
position: 829566
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:831863:1
position: 831863
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:829566-831863:1:exon

LOC121076991
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 8869
nc RNA class: lncRNA
gene: LOC121076991
product: uncharacterized LOC121076991
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XR_005823859.1
SIO_010081: LOC121076991
subclass of: SO_0000673
so part of: LOC121076991
location: join(829566..829760,830822..830929,831706..831863)
location: region:829566-831863:1
so has part: feature:829566-829760:1:exon
so has part: feature:830822-830929:1:exon
so has part: feature:831706-831863:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:829566-829760:1:exon

position:829760:1
position: 829760
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:830822-830929:1:exon

position:830822:1
position: 830822
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:830929:1
position: 830929
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:831706-831863:1:exon

position:831706:1
position: 831706
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC121076992
type: Gene
subclass of: SO_0000704
RO_0002162: 8869
gene: LOC121076992
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 856438..857428
location: region:856438-857428:1
so has part: feature:856438-857428:1:exon
subclass of: SO_0000011

121076992
type: Gene
SIO_000068: ncbigene

position:856438:1
position: 856438
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:857428:1
position: 857428
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:856438-857428:1:exon

LOC121076992
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 8869
nc RNA class: lncRNA
gene: LOC121076992
product: uncharacterized LOC121076992
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XR_005823860.1
SIO_010081: LOC121076992
subclass of: SO_0000673
so part of: LOC121076992
location: join(856438..856637,856721..857123,857247..857428)
location: region:856438-857428:1
so has part: feature:856438-856637:1:exon
so has part: feature:856721-857123:1:exon
so has part: feature:857247-857428:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:856438-856637:1:exon

position:856637:1
position: 856637
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:856721-857123:1:exon

position:856721:1
position: 856721
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:857123:1
position: 857123
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:857247-857428:1:exon

position:857247:1
position: 857247
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

PSMD7
type: Gene
subclass of: SO_0000704
RO_0002162: 8869
gene: PSMD7
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1010238..1017248
location: region:1010238-1017248:1
so has part: feature:1010238-1017248:1:exon
subclass of: SO_0000010

121076986
type: Gene
SIO_000068: ncbigene

position:1010238:1
position: 1010238
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1017248:1
position: 1017248
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1010238-1017248:1:exon

PSMD7
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8869
gene: PSMD7
product: proteasome 26S subunit, non-ATPase 7
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 15 long SRA reads, 16 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 12 samples with support for all annotated introns
transcript id: XM_040571703.1
SIO_010081: PSMD7
subclass of: SO_0000673
so part of: PSMD7
location: join(1010238..1010364,1011099..1011190,1012551..1012643,1013404..1013501,1013786..1013866,1015191..1015282,1015989..1017248)
location: region:1010238-1017248:1
so has part: feature:1010238-1010364:1:exon
so has part: feature:1011099-1011190:1:exon
so has part: feature:1012551-1012643:1:exon
so has part: feature:1013404-1013501:1:exon
so has part: feature:1013786-1013866:1:exon
so has part: feature:1015191-1015282:1:exon
so has part: feature:1015989-1017248:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1010238-1010364:1:exon

position:1010364:1
position: 1010364
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1011099-1011190:1:exon

position:1011099:1
position: 1011099
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1011190:1
position: 1011190
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1012551-1012643:1:exon

position:1012551:1
position: 1012551
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1012643:1
position: 1012643
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1013404-1013501:1:exon

position:1013404:1
position: 1013404
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1013501:1
position: 1013501
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1013786-1013866:1:exon

position:1013786:1
position: 1013786
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1013866:1
position: 1013866
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1015191-1015282:1:exon

position:1015191:1
position: 1015191
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1015282:1
position: 1015282
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1015989-1017248:1:exon

position:1015989:1
position: 1015989
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

PSMD7
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8869
gene: PSMD7
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: 26S proteasome non-ATPase regulatory subunit 7
translation: MPELAVDRVVVHPLVLLSVVDHFNRIGKVGNQKRVVGVLLGSWQKKILDVSNSFAVPFDEDDKDDTVWFLDHDYLENMYGMFKKVNARERIVGWYHTGPKLHKNDIAINELMKRYCPNSVLVIIDVKPKDLGLPTEAYISVEEVHDDGTPTSKTFEHVTSEIGAEEAEEVGVEHLLRDIKDTTVGTLSQRITNQVHGLKGLNSKLLDIRSYLEKVAMGKLPINHQIIYHLQDVFNLLPDVNLQEFVKAFYLKTNDQMVVVYLASLIRSVVALHNLINNKIANRDAEKKEGQEKEESKKERKDEKEKDKEKSDVKKEEKKDKK
SIO_010081: PSMD7
subclass of: SO_0000673
so part of: PSMD7
location: join(1010291..1010364,1011099..1011190,1012551..1012643,1013404..1013501,1013786..1013866,1015191..1015282,1015989..1016427)
location: region:1010291-1016427:1
so has part: feature:1010291-1010364:1:exon
so has part: feature:1011099-1011190:1:exon
so has part: feature:1012551-1012643:1:exon
so has part: feature:1013404-1013501:1:exon
so has part: feature:1013786-1013866:1:exon
so has part: feature:1015191-1015282:1:exon
so has part: feature:1015989-1016427:1:exon

XP_040427637.1
type: Protein
SIO_000068: ncbiprotein

position:1010291:1
position: 1010291
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1016427:1
position: 1016427
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1010291-1010364:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1011099-1011190:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1012551-1012643:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1013404-1013501:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1013786-1013866:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1015191-1015282:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1015989-1016427:1:exon

WWP2
type: Gene
subclass of: SO_0000704
RO_0002162: 8869
gene: WWP2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1018047..1054048)
location: region:1018047-1054048:-1
so has part: feature:1018047-1054048:-1:exon
subclass of: SO_0000010

121076976
type: Gene
SIO_000068: ncbigene

position:1018047:-1
position: 1018047
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1054048:-1
position: 1054048
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1018047-1054048:-1:exon

WWP2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8869
gene: WWP2
product: WW domain containing E3 ubiquitin protein ligase 2, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 122 long SRA reads, 21 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 9 samples with support for all annotated introns
transcript id: XM_040571672.1
SIO_010081: WWP2
subclass of: SO_0000673
so part of: WWP2
location: complement(join(1018047..1019548,1019767..1019839,1020718..1020814,1020988..1021092,1021439..1021559,1022077..1022217,1022332..1022465,1023359..1023518,1024728..1024816,1024896..1024967,1025081..1025159,1025510..1025638,1026108..1026189,1028147..1028201,1030685..1030859,1032917..1033006,1037368..1037575,1040270..1040409,1044517..1044613,1045419..1045700,1050875..1050993,1051248..1051395,1052035..1052119,1053950..1054048))
location: region:1018047-1054048:-1
so has part: feature:1053950-1054048:-1:exon
so has part: feature:1052035-1052119:-1:exon
so has part: feature:1051248-1051395:-1:exon
so has part: feature:1050875-1050993:-1:exon
so has part: feature:1045419-1045700:-1:exon
so has part: feature:1044517-1044613:-1:exon
so has part: feature:1040270-1040409:-1:exon
so has part: feature:1037368-1037575:-1:exon
so has part: feature:1032917-1033006:-1:exon
so has part: feature:1030685-1030859:-1:exon
so has part: feature:1028147-1028201:-1:exon
so has part: feature:1026108-1026189:-1:exon
so has part: feature:1025510-1025638:-1:exon
so has part: feature:1025081-1025159:-1:exon
so has part: feature:1024896-1024967:-1:exon
so has part: feature:1024728-1024816:-1:exon
so has part: feature:1023359-1023518:-1:exon
so has part: feature:1022332-1022465:-1:exon
so has part: feature:1022077-1022217:-1:exon
so has part: feature:1021439-1021559:-1:exon
so has part: feature:1020988-1021092:-1:exon
so has part: feature:1020718-1020814:-1:exon
so has part: feature:1019767-1019839:-1:exon
so has part: feature:1018047-1019548:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1053950-1054048:-1:exon

position:1053950:-1
position: 1053950
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1052035-1052119:-1:exon

position:1052035:-1
position: 1052035
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1052119:-1
position: 1052119
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1051248-1051395:-1:exon

position:1051248:-1
position: 1051248
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1051395:-1
position: 1051395
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1050875-1050993:-1:exon

position:1050875:-1
position: 1050875
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1050993:-1
position: 1050993
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1045419-1045700:-1:exon

position:1045419:-1
position: 1045419
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1045700:-1
position: 1045700
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1044517-1044613:-1:exon

position:1044517:-1
position: 1044517
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1044613:-1
position: 1044613
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1040270-1040409:-1:exon

position:1040270:-1
position: 1040270
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1040409:-1
position: 1040409
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1037368-1037575:-1:exon

position:1037368:-1
position: 1037368
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1037575:-1
position: 1037575
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:1032917-1033006:-1:exon

position:1032917:-1
position: 1032917
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1033006:-1
position: 1033006
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:1030685-1030859:-1:exon

position:1030685:-1
position: 1030685
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1030859:-1
position: 1030859
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:1028147-1028201:-1:exon

position:1028147:-1
position: 1028147
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1028201:-1
position: 1028201
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:1026108-1026189:-1:exon

position:1026108:-1
position: 1026108
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1026189:-1
position: 1026189
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:1025510-1025638:-1:exon

position:1025510:-1
position: 1025510
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1025638:-1
position: 1025638
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:1025081-1025159:-1:exon

position:1025081:-1
position: 1025081
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1025159:-1
position: 1025159
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:1024896-1024967:-1:exon

position:1024896:-1
position: 1024896
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1024967:-1
position: 1024967
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:1024728-1024816:-1:exon

position:1024728:-1
position: 1024728
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1024816:-1
position: 1024816
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:1023359-1023518:-1:exon

position:1023359:-1
position: 1023359
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1023518:-1
position: 1023518
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:1022332-1022465:-1:exon

position:1022332:-1
position: 1022332
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1022465:-1
position: 1022465
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:1022077-1022217:-1:exon

position:1022077:-1
position: 1022077
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1022217:-1
position: 1022217
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:1021439-1021559:-1:exon

position:1021439:-1
position: 1021439
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1021559:-1
position: 1021559
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:1020988-1021092:-1:exon

position:1020988:-1
position: 1020988
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1021092:-1
position: 1021092
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 22
SIO_000628: feature:1020718-1020814:-1:exon

position:1020718:-1
position: 1020718
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1020814:-1
position: 1020814
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 23
SIO_000628: feature:1019767-1019839:-1:exon

position:1019767:-1
position: 1019767
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1019839:-1
position: 1019839
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 24
SIO_000628: feature:1018047-1019548:-1:exon

position:1019548:-1
position: 1019548
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

WWP2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8869
gene: WWP2
product: WW domain containing E3 ubiquitin protein ligase 2, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 146 long SRA reads, 35 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 12 samples with support for all annotated introns
transcript id: XM_040571673.1
SIO_010081: WWP2
subclass of: SO_0000673
so part of: WWP2
location: complement(join(1018047..1019548,1019767..1019839,1020718..1020814,1020988..1021092,1021439..1021559,1022077..1022217,1022332..1022465,1023359..1023518,1024728..1024816,1024896..1024967,1025081..1025159,1025510..1025638,1026108..1026189,1028147..1028201,1030685..1030859,1032917..1033006,1037368..1037575,1040270..1040409,1044517..1044613,1045563..1045700,1050875..1050993,1051248..1051395,1052035..1052119,1053950..1054047))
location: region:1018047-1054047:-1
so has part: feature:1053950-1054047:-1:exon
so has part: feature:1052035-1052119:-1:exon
so has part: feature:1051248-1051395:-1:exon
so has part: feature:1050875-1050993:-1:exon
so has part: feature:1045563-1045700:-1:exon
so has part: feature:1044517-1044613:-1:exon
so has part: feature:1040270-1040409:-1:exon
so has part: feature:1037368-1037575:-1:exon
so has part: feature:1032917-1033006:-1:exon
so has part: feature:1030685-1030859:-1:exon
so has part: feature:1028147-1028201:-1:exon
so has part: feature:1026108-1026189:-1:exon
so has part: feature:1025510-1025638:-1:exon
so has part: feature:1025081-1025159:-1:exon
so has part: feature:1024896-1024967:-1:exon
so has part: feature:1024728-1024816:-1:exon
so has part: feature:1023359-1023518:-1:exon
so has part: feature:1022332-1022465:-1:exon
so has part: feature:1022077-1022217:-1:exon
so has part: feature:1021439-1021559:-1:exon
so has part: feature:1020988-1021092:-1:exon
so has part: feature:1020718-1020814:-1:exon
so has part: feature:1019767-1019839:-1:exon
so has part: feature:1018047-1019548:-1:exon

position:1054047:-1
position: 1054047
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1053950-1054047:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1052035-1052119:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1051248-1051395:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1050875-1050993:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1045563-1045700:-1:exon

position:1045563:-1
position: 1045563
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1044517-1044613:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1040270-1040409:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1037368-1037575:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1032917-1033006:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1030685-1030859:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1028147-1028201:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1026108-1026189:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1025510-1025638:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1025081-1025159:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1024896-1024967:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1024728-1024816:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1023359-1023518:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:1022332-1022465:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:1022077-1022217:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:1021439-1021559:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:1020988-1021092:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:1020718-1020814:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:1019767-1019839:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:1018047-1019548:-1:exon

WWP2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8869
gene: WWP2
product: WW domain containing E3 ubiquitin protein ligase 2, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 38 long SRA reads, 18 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 10 samples with support for all annotated introns
transcript id: XM_040571674.1
SIO_010081: WWP2
subclass of: SO_0000673
so part of: WWP2
location: complement(join(1018047..1019548,1019767..1019839,1020718..1020814,1020988..1021092,1021439..1021559,1022077..1022217,1022332..1022465,1023359..1023518,1024728..1024816,1024896..1024967,1025081..1025159,1025510..1025638,1026108..1026189,1028147..1028201,1028430..1028613))
location: region:1018047-1028613:-1
so has part: feature:1028430-1028613:-1:exon
so has part: feature:1028147-1028201:-1:exon
so has part: feature:1026108-1026189:-1:exon
so has part: feature:1025510-1025638:-1:exon
so has part: feature:1025081-1025159:-1:exon
so has part: feature:1024896-1024967:-1:exon
so has part: feature:1024728-1024816:-1:exon
so has part: feature:1023359-1023518:-1:exon
so has part: feature:1022332-1022465:-1:exon
so has part: feature:1022077-1022217:-1:exon
so has part: feature:1021439-1021559:-1:exon
so has part: feature:1020988-1021092:-1:exon
so has part: feature:1020718-1020814:-1:exon
so has part: feature:1019767-1019839:-1:exon
so has part: feature:1018047-1019548:-1:exon

position:1028613:-1
position: 1028613
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1028430-1028613:-1:exon

position:1028430:-1
position: 1028430
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1028147-1028201:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1026108-1026189:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1025510-1025638:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1025081-1025159:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1024896-1024967:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1024728-1024816:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1023359-1023518:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1022332-1022465:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1022077-1022217:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1021439-1021559:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1020988-1021092:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1020718-1020814:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1019767-1019839:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1018047-1019548:-1:exon

WWP2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8869
gene: WWP2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: NEDD4-like E3 ubiquitin-protein ligase WWP2 isoform X2
translation: MASAGSSRARAGPPCEKSQLSVKVVSVKPKAQSRQSRLSCYVEVAGDGLPSETKKTGKQMGSSELLWNEILVLNVTAQSHLDLKVWSCHTLRNELLGTASVSLWNLLKSGGKLENRQLTLNLQTENKGSVVSGGELTIFLDGPAVDLGSLPNGSAVTEGSQVPGRDPSSMAAAAESRQQPPATNCFGSRSRTHRHAAAAARQGAGSGEQSPSTRSRHRQPAKSQAPTSTMNGTANGTVNGDVTGAADIEEERPAAGATTPAPVASSAADGSVAPALSSSGEAEEAAPGSSTPQARAAVLALDALPPGWEQRELPNGRVYYVDHNNKTTTWERPLPPGWEKRVDPRGRYYYVDHNTRTTTWQRPTAEYVRNYEQWQSQRNQLQGAMQQFSQRFLYQSSGAPSDNDPLGPLPPGWEKRQDNGRVYYVNHNTRTTQWEDPRTQGMIQEPPLPPGWEMKYTNEGVRYFVDHNTRTTTFKDPRPGFESGSKQGGSPGAYDRSFRWKYHQFRFLCHSNALPSHVKISVSRQTLFEDSFQQIMNMKPYDLRRRLYIIMRGEEGLDYGGIAREWFFLLSHEVLNPMYCLFEYAGKNNYCLQINPASSINPDHLTYFRFIGRFIAMALYHGKFIDTGFTLPFYKRMLNKRPTLKDLESIDPEFYNSIVWTKENSLEECGLELYFIQDMEILGKVTTHELKEGGESIRVTEENKEEYIMLLTDWRFTRGVEEQTKAFLDGFNEVVPLEWLRYFDEKELELMLCGMQEIDMNDWQKNTIYRHYTKNSKQIQWFWQVVKEMDNEKRIRLLQFVTGTCRLPVGGFAELIGSNGPQKFCIDKVGKETWLPRSHTCFNRLDLPPYKSYEQLKEKLLYAIEETEGFGQE
SIO_010081: WWP2
subclass of: SO_0000673
so part of: WWP2
location: complement(join(1019449..1019548,1019767..1019839,1020718..1020814,1020988..1021092,1021439..1021559,1022077..1022217,1022332..1022465,1023359..1023518,1024728..1024816,1024896..1024967,1025081..1025159,1025510..1025638,1026108..1026189,1028147..1028201,1030685..1030859,1032917..1033006,1037368..1037575,1040270..1040409,1044517..1044613,1045563..1045700,1050875..1050993,1051248..1051395,1052035..1052104))
location: region:1019449-1052104:-1
so has part: feature:1052035-1052104:-1:exon
so has part: feature:1051248-1051395:-1:exon
so has part: feature:1050875-1050993:-1:exon
so has part: feature:1045563-1045700:-1:exon
so has part: feature:1044517-1044613:-1:exon
so has part: feature:1040270-1040409:-1:exon
so has part: feature:1037368-1037575:-1:exon
so has part: feature:1032917-1033006:-1:exon
so has part: feature:1030685-1030859:-1:exon
so has part: feature:1028147-1028201:-1:exon
so has part: feature:1026108-1026189:-1:exon
so has part: feature:1025510-1025638:-1:exon
so has part: feature:1025081-1025159:-1:exon
so has part: feature:1024896-1024967:-1:exon
so has part: feature:1024728-1024816:-1:exon
so has part: feature:1023359-1023518:-1:exon
so has part: feature:1022332-1022465:-1:exon
so has part: feature:1022077-1022217:-1:exon
so has part: feature:1021439-1021559:-1:exon
so has part: feature:1020988-1021092:-1:exon
so has part: feature:1020718-1020814:-1:exon
so has part: feature:1019767-1019839:-1:exon
so has part: feature:1019449-1019548:-1:exon

XP_040427607.1
type: Protein
SIO_000068: ncbiprotein

position:1019449:-1
position: 1019449
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1052104:-1
position: 1052104
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1052035-1052104:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1051248-1051395:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1050875-1050993:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1045563-1045700:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1044517-1044613:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1040270-1040409:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1037368-1037575:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1032917-1033006:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1030685-1030859:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1028147-1028201:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1026108-1026189:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1025510-1025638:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1025081-1025159:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1024896-1024967:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1024728-1024816:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1023359-1023518:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1022332-1022465:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:1022077-1022217:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:1021439-1021559:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:1020988-1021092:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:1020718-1020814:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:1019767-1019839:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:1019449-1019548:-1:exon

WWP2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8869
gene: WWP2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: NEDD4-like E3 ubiquitin-protein ligase WWP2 isoform X1
translation: MASAGSSRARAGPPCEKSQLSVKVVSVKPKAQSRQSRLSCYVEVAGDGLPSETKKTGKQMGSSELLWNEILVLNVTAQSHLDLKVWSCHTLRNELLGTASVSLWNLLKSGGKLENRQLTLNLQTENKGSVVSGGELTIFLDGPAVDLGSLPNGSAVTEGECRPAPRARGGSAHEAVSAGGERSGAESAAPSTAERTSECQQPPPPPGSQVPGRDPSSMAAAAESRQQPPATNCFGSRSRTHRHAAAAARQGAGSGEQSPSTRSRHRQPAKSQAPTSTMNGTANGTVNGDVTGAADIEEERPAAGATTPAPVASSAADGSVAPALSSSGEAEEAAPGSSTPQARAAVLALDALPPGWEQRELPNGRVYYVDHNNKTTTWERPLPPGWEKRVDPRGRYYYVDHNTRTTTWQRPTAEYVRNYEQWQSQRNQLQGAMQQFSQRFLYQSSGAPSDNDPLGPLPPGWEKRQDNGRVYYVNHNTRTTQWEDPRTQGMIQEPPLPPGWEMKYTNEGVRYFVDHNTRTTTFKDPRPGFESGSKQGGSPGAYDRSFRWKYHQFRFLCHSNALPSHVKISVSRQTLFEDSFQQIMNMKPYDLRRRLYIIMRGEEGLDYGGIAREWFFLLSHEVLNPMYCLFEYAGKNNYCLQINPASSINPDHLTYFRFIGRFIAMALYHGKFIDTGFTLPFYKRMLNKRPTLKDLESIDPEFYNSIVWTKENSLEECGLELYFIQDMEILGKVTTHELKEGGESIRVTEENKEEYIMLLTDWRFTRGVEEQTKAFLDGFNEVVPLEWLRYFDEKELELMLCGMQEIDMNDWQKNTIYRHYTKNSKQIQWFWQVVKEMDNEKRIRLLQFVTGTCRLPVGGFAELIGSNGPQKFCIDKVGKETWLPRSHTCFNRLDLPPYKSYEQLKEKLLYAIEETEGFGQE
SIO_010081: WWP2
subclass of: SO_0000673
so part of: WWP2
location: complement(join(1019449..1019548,1019767..1019839,1020718..1020814,1020988..1021092,1021439..1021559,1022077..1022217,1022332..1022465,1023359..1023518,1024728..1024816,1024896..1024967,1025081..1025159,1025510..1025638,1026108..1026189,1028147..1028201,1030685..1030859,1032917..1033006,1037368..1037575,1040270..1040409,1044517..1044613,1045419..1045700,1050875..1050993,1051248..1051395,1052035..1052104))
location: region:1019449-1052104:-1
so has part: feature:1052035-1052104:-1:exon
so has part: feature:1051248-1051395:-1:exon
so has part: feature:1050875-1050993:-1:exon
so has part: feature:1045419-1045700:-1:exon
so has part: feature:1044517-1044613:-1:exon
so has part: feature:1040270-1040409:-1:exon
so has part: feature:1037368-1037575:-1:exon
so has part: feature:1032917-1033006:-1:exon
so has part: feature:1030685-1030859:-1:exon
so has part: feature:1028147-1028201:-1:exon
so has part: feature:1026108-1026189:-1:exon
so has part: feature:1025510-1025638:-1:exon
so has part: feature:1025081-1025159:-1:exon
so has part: feature:1024896-1024967:-1:exon
so has part: feature:1024728-1024816:-1:exon
so has part: feature:1023359-1023518:-1:exon
so has part: feature:1022332-1022465:-1:exon
so has part: feature:1022077-1022217:-1:exon
so has part: feature:1021439-1021559:-1:exon
so has part: feature:1020988-1021092:-1:exon
so has part: feature:1020718-1020814:-1:exon
so has part: feature:1019767-1019839:-1:exon
so has part: feature:1019449-1019548:-1:exon

XP_040427606.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1052035-1052104:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1051248-1051395:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1050875-1050993:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1045419-1045700:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1044517-1044613:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1040270-1040409:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1037368-1037575:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1032917-1033006:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1030685-1030859:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1028147-1028201:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1026108-1026189:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1025510-1025638:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1025081-1025159:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1024896-1024967:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1024728-1024816:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1023359-1023518:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1022332-1022465:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:1022077-1022217:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:1021439-1021559:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:1020988-1021092:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:1020718-1020814:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:1019767-1019839:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:1019449-1019548:-1:exon

WWP2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8869
gene: WWP2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: NEDD4-like E3 ubiquitin-protein ligase WWP2 isoform X3
translation: MIQEPPLPPGWEMKYTNEGVRYFVDHNTRTTTFKDPRPGFESGSKQGGSPGAYDRSFRWKYHQFRFLCHSNALPSHVKISVSRQTLFEDSFQQIMNMKPYDLRRRLYIIMRGEEGLDYGGIAREWFFLLSHEVLNPMYCLFEYAGKNNYCLQINPASSINPDHLTYFRFIGRFIAMALYHGKFIDTGFTLPFYKRMLNKRPTLKDLESIDPEFYNSIVWTKENSLEECGLELYFIQDMEILGKVTTHELKEGGESIRVTEENKEEYIMLLTDWRFTRGVEEQTKAFLDGFNEVVPLEWLRYFDEKELELMLCGMQEIDMNDWQKNTIYRHYTKNSKQIQWFWQVVKEMDNEKRIRLLQFVTGTCRLPVGGFAELIGSNGPQKFCIDKVGKETWLPRSHTCFNRLDLPPYKSYEQLKEKLLYAIEETEGFGQE
SIO_010081: WWP2
subclass of: SO_0000673
so part of: WWP2
location: complement(join(1019449..1019548,1019767..1019839,1020718..1020814,1020988..1021092,1021439..1021559,1022077..1022217,1022332..1022465,1023359..1023518,1024728..1024816,1024896..1024967,1025081..1025159,1025510..1025637))
location: region:1019449-1025637:-1
so has part: feature:1025510-1025637:-1:exon
so has part: feature:1025081-1025159:-1:exon
so has part: feature:1024896-1024967:-1:exon
so has part: feature:1024728-1024816:-1:exon
so has part: feature:1023359-1023518:-1:exon
so has part: feature:1022332-1022465:-1:exon
so has part: feature:1022077-1022217:-1:exon
so has part: feature:1021439-1021559:-1:exon
so has part: feature:1020988-1021092:-1:exon
so has part: feature:1020718-1020814:-1:exon
so has part: feature:1019767-1019839:-1:exon
so has part: feature:1019449-1019548:-1:exon

XP_040427608.1
type: Protein
SIO_000068: ncbiprotein

position:1025637:-1
position: 1025637
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1025510-1025637:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1025081-1025159:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1024896-1024967:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1024728-1024816:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1023359-1023518:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1022332-1022465:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1022077-1022217:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1021439-1021559:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1020988-1021092:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1020718-1020814:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1019767-1019839:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1019449-1019548:-1:exon

NOB1
type: Gene
subclass of: SO_0000704
RO_0002162: 8869
gene: NOB1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1054089..1056902
location: region:1054089-1056902:1
so has part: feature:1054089-1056902:1:exon
subclass of: SO_0000010

121076981
type: Gene
SIO_000068: ncbigene

position:1054089:1
position: 1054089
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1056902:1
position: 1056902
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1054089-1056902:1:exon

NOB1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8869
gene: NOB1
product: NIN1 (RPN12) binding protein 1 homolog, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 35 long SRA reads, 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 12 samples with support for all annotated introns
transcript id: XM_040571687.1
SIO_010081: NOB1
subclass of: SO_0000673
so part of: NOB1
location: join(1054089..1054235,1054343..1054475,1054569..1054702,1054788..1054859,1054987..1055124,1055245..1055469,1055721..1055818,1055958..1056102,1056332..1056902)
location: region:1054089-1056902:1
so has part: feature:1054089-1054235:1:exon
so has part: feature:1054343-1054475:1:exon
so has part: feature:1054569-1054702:1:exon
so has part: feature:1054788-1054859:1:exon
so has part: feature:1054987-1055124:1:exon
so has part: feature:1055245-1055469:1:exon
so has part: feature:1055721-1055818:1:exon
so has part: feature:1055958-1056102:1:exon
so has part: feature:1056332-1056902:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1054089-1054235:1:exon

position:1054235:1
position: 1054235
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1054343-1054475:1:exon

position:1054343:1
position: 1054343
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1054475:1
position: 1054475
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1054569-1054702:1:exon

position:1054569:1
position: 1054569
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1054702:1
position: 1054702
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1054788-1054859:1:exon

position:1054788:1
position: 1054788
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1054859:1
position: 1054859
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1054987-1055124:1:exon

position:1054987:1
position: 1054987
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1055124:1
position: 1055124
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1055245-1055469:1:exon

position:1055245:1
position: 1055245
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1055469:1
position: 1055469
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1055721-1055818:1:exon

position:1055721:1
position: 1055721
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1055818:1
position: 1055818
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1055958-1056102:1:exon

position:1055958:1
position: 1055958
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1056102:1
position: 1056102
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:1056332-1056902:1:exon

position:1056332:1
position: 1056332
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

NOB1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8869
gene: NOB1
product: NIN1 (RPN12) binding protein 1 homolog, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 long SRA reads, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_040571686.1
SIO_010081: NOB1
subclass of: SO_0000673
so part of: NOB1
location: join(1054132..1054259,1054298..1054475,1054569..1054702,1054788..1054859,1054987..1055124,1055245..1055469,1055721..1055818,1055958..1056102,1056332..1056902)
location: region:1054132-1056902:1
so has part: feature:1054132-1054259:1:exon
so has part: feature:1054298-1054475:1:exon
so has part: feature:1054569-1054702:1:exon
so has part: feature:1054788-1054859:1:exon
so has part: feature:1054987-1055124:1:exon
so has part: feature:1055245-1055469:1:exon
so has part: feature:1055721-1055818:1:exon
so has part: feature:1055958-1056102:1:exon
so has part: feature:1056332-1056902:1:exon

position:1054132:1
position: 1054132
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1054132-1054259:1:exon

position:1054259:1
position: 1054259
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1054298-1054475:1:exon

position:1054298:1
position: 1054298
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1054569-1054702:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1054788-1054859:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1054987-1055124:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1055245-1055469:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1055721-1055818:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1055958-1056102:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1056332-1056902:1:exon

NOB1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8869
gene: NOB1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: RNA-binding protein NOB1 isoform X1
translation: MARVAHVVADTGAFVCGAALQVGAGRAPGGDRGARAPRDGAAPQEVALSVYTVPEVLAEIRDRPTRRRLAALPYELRLRRPRLDFVRLVTDFAKRTGDFPSLSAADVQVLALTCQLQADTLGPGCLRLRPPDKVRLSSSPRHPEAPLHLAGFHLPGKHKRPGKGQRQPSPERSQEPPESNEFSSFLYWRTPLPSIEDELQELLEAHAVSISPETTEEHRSPEDGDSAKEEEEEDEDESDDEGWITPSNLKQVQQDLGHCNTAPADIQVGCVTTDFAMQNVLLQMGLHVLAVNGMLIRRARSHILRCHGCFKTTSDMTKVFCPHCGNKTLKKVAVSVSDDGSLHVHFSRNPKVLNPRGLRYPLPAPQGGKHANNPHLVEDQPFPQQRLSRKARQKTNVFDPDYVAGVSPFAENDIYSRAANLHIRDAALGAGRRRLNPNAVTKKFVKRR
SIO_010081: NOB1
subclass of: SO_0000673
so part of: NOB1
location: join(1054173..1054259,1054298..1054475,1054569..1054702,1054788..1054859,1054987..1055124,1055245..1055469,1055721..1055818,1055958..1056102,1056332..1056601)
location: region:1054173-1056601:1
so has part: feature:1054173-1054259:1:exon
so has part: feature:1054298-1054475:1:exon
so has part: feature:1054569-1054702:1:exon
so has part: feature:1054788-1054859:1:exon
so has part: feature:1054987-1055124:1:exon
so has part: feature:1055245-1055469:1:exon
so has part: feature:1055721-1055818:1:exon
so has part: feature:1055958-1056102:1:exon
so has part: feature:1056332-1056601:1:exon

XP_040427620.1
type: Protein
SIO_000068: ncbiprotein

position:1054173:1
position: 1054173
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1056601:1
position: 1056601
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1054173-1054259:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1054298-1054475:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1054569-1054702:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1054788-1054859:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1054987-1055124:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1055245-1055469:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1055721-1055818:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1055958-1056102:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1056332-1056601:1:exon

NOB1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8869
gene: NOB1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: RNA-binding protein NOB1 isoform X2
translation: MARVAHVVADTGAFVCGAALQEVALSVYTVPEVLAEIRDRPTRRRLAALPYELRLRRPRLDFVRLVTDFAKRTGDFPSLSAADVQVLALTCQLQADTLGPGCLRLRPPDKVRLSSSPRHPEAPLHLAGFHLPGKHKRPGKGQRQPSPERSQEPPESNEFSSFLYWRTPLPSIEDELQELLEAHAVSISPETTEEHRSPEDGDSAKEEEEEDEDESDDEGWITPSNLKQVQQDLGHCNTAPADIQVGCVTTDFAMQNVLLQMGLHVLAVNGMLIRRARSHILRCHGCFKTTSDMTKVFCPHCGNKTLKKVAVSVSDDGSLHVHFSRNPKVLNPRGLRYPLPAPQGGKHANNPHLVEDQPFPQQRLSRKARQKTNVFDPDYVAGVSPFAENDIYSRAANLHIRDAALGAGRRRLNPNAVTKKFVKRR
SIO_010081: NOB1
subclass of: SO_0000673
so part of: NOB1
location: join(1054173..1054235,1054343..1054475,1054569..1054702,1054788..1054859,1054987..1055124,1055245..1055469,1055721..1055818,1055958..1056102,1056332..1056601)
location: region:1054173-1056601:1
so has part: feature:1054173-1054235:1:exon
so has part: feature:1054343-1054475:1:exon
so has part: feature:1054569-1054702:1:exon
so has part: feature:1054788-1054859:1:exon
so has part: feature:1054987-1055124:1:exon
so has part: feature:1055245-1055469:1:exon
so has part: feature:1055721-1055818:1:exon
so has part: feature:1055958-1056102:1:exon
so has part: feature:1056332-1056601:1:exon

XP_040427621.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1054173-1054235:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1054343-1054475:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1054569-1054702:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1054788-1054859:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1054987-1055124:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1055245-1055469:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1055721-1055818:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1055958-1056102:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1056332-1056601:1:exon

NQO1
type: Gene
subclass of: SO_0000704
RO_0002162: 8869
gene: NQO1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1057492..1059947
location: region:1057492-1059947:1
so has part: feature:1057492-1059947:1:exon
subclass of: SO_0000010

121076985
type: Gene
SIO_000068: ncbigene

position:1057492:1
position: 1057492
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1059947:1
position: 1059947
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1057492-1059947:1:exon

NQO1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8869
gene: NQO1
product: NAD(P)H quinone dehydrogenase 1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_040571701.1
SIO_010081: NQO1
subclass of: SO_0000673
so part of: NQO1
location: join(1057492..1057980,1058444..1058608,1058684..1058814,1058958..1059071,1059176..1059277,1059354..1059947)
location: region:1057492-1059947:1
so has part: feature:1057492-1057980:1:exon
so has part: feature:1058444-1058608:1:exon
so has part: feature:1058684-1058814:1:exon
so has part: feature:1058958-1059071:1:exon
so has part: feature:1059176-1059277:1:exon
so has part: feature:1059354-1059947:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1057492-1057980:1:exon

position:1057980:1
position: 1057980
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1058444-1058608:1:exon

position:1058444:1
position: 1058444
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1058608:1
position: 1058608
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1058684-1058814:1:exon

position:1058684:1
position: 1058684
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1058814:1
position: 1058814
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1058958-1059071:1:exon

position:1058958:1
position: 1058958
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1059071:1
position: 1059071
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1059176-1059277:1:exon

position:1059176:1
position: 1059176
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1059277:1
position: 1059277
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1059354-1059947:1:exon

position:1059354:1
position: 1059354
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

NQO1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8869
gene: NQO1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: NAD(P)H dehydrogenase [quinone] 1
translation: MAAPDGAQCPRALGTAGTRGWTRPSGSGAESRHCTRWLLTQPPGDSSSPAPSEVQSGIQQCSSPAPGSRAALAMAGRRALIVLAHLEKTSFNHAMAEAAASTLRDKGWDVTISDLYAMGFNPVLSRRDITGPPKDPEHFVYETEMGLAWKEGRLSSDIVAEQKKIEAADLIIFQFPLQWLGMPAILKGWFDRVIIQGFAYSMATIYEQGRFQKKKAVLSFTTSGLESMYTPRGINGDMNVFLWPMQRGMLQFCGFQVLAPQICYSVRYVTPEARAQMLSAWRRRLAAIWEEKPLGFIPNSCFELSMAGGFVLKQEVLAQQEGQPQGLTVGQHLGKAFPPDEQLKAPE
SIO_010081: NQO1
subclass of: SO_0000673
so part of: NQO1
location: join(1057755..1057980,1058444..1058608,1058684..1058814,1058958..1059071,1059176..1059277,1059354..1059659)
location: region:1057755-1059659:1
so has part: feature:1057755-1057980:1:exon
so has part: feature:1058444-1058608:1:exon
so has part: feature:1058684-1058814:1:exon
so has part: feature:1058958-1059071:1:exon
so has part: feature:1059176-1059277:1:exon
so has part: feature:1059354-1059659:1:exon

XP_040427635.1
type: Protein
SIO_000068: ncbiprotein

position:1057755:1
position: 1057755
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1059659:1
position: 1059659
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1057755-1057980:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1058444-1058608:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1058684-1058814:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1058958-1059071:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1059176-1059277:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1059354-1059659:1:exon

NFAT5
type: Gene
subclass of: SO_0000704
RO_0002162: 8869
gene: NFAT5
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1061992..1120207)
location: region:1061992-1120207:-1
so has part: feature:1061992-1120207:-1:exon
subclass of: SO_0000010

121076993
type: Gene
SIO_000068: ncbigene

position:1061992:-1
position: 1061992
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1120207:-1
position: 1120207
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1061992-1120207:-1:exon

NFAT5
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8869
gene: NFAT5
product: nuclear factor of activated T cells 5, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 42 long SRA reads, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 7 samples with support for all annotated introns
transcript id: XM_040571710.1
SIO_010081: NFAT5
subclass of: SO_0000673
so part of: NFAT5
location: complement(join(1061992..1069184,1070050..1070296,1071309..1073742,1074261..1074409,1077296..1077373,1078001..1078133,1080137..1080189,1080360..1080494,1082338..1082510,1083785..1083975,1086327..1086519,1091041..1091599,1103665..1103790,1120066..1120207))
location: region:1061992-1120207:-1
so has part: feature:1120066-1120207:-1:exon
so has part: feature:1103665-1103790:-1:exon
so has part: feature:1091041-1091599:-1:exon
so has part: feature:1086327-1086519:-1:exon
so has part: feature:1083785-1083975:-1:exon
so has part: feature:1082338-1082510:-1:exon
so has part: feature:1080360-1080494:-1:exon
so has part: feature:1080137-1080189:-1:exon
so has part: feature:1078001-1078133:-1:exon
so has part: feature:1077296-1077373:-1:exon
so has part: feature:1074261-1074409:-1:exon
so has part: feature:1071309-1073742:-1:exon
so has part: feature:1070050-1070296:-1:exon
so has part: feature:1061992-1069184:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1120066-1120207:-1:exon

position:1120066:-1
position: 1120066
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1103665-1103790:-1:exon

position:1103665:-1
position: 1103665
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1103790:-1
position: 1103790
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1091041-1091599:-1:exon

position:1091041:-1
position: 1091041
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1091599:-1
position: 1091599
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1086327-1086519:-1:exon

position:1086327:-1
position: 1086327
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1086519:-1
position: 1086519
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1083785-1083975:-1:exon

position:1083785:-1
position: 1083785
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1083975:-1
position: 1083975
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1082338-1082510:-1:exon

position:1082338:-1
position: 1082338
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1082510:-1
position: 1082510
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1080360-1080494:-1:exon

position:1080360:-1
position: 1080360
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1080494:-1
position: 1080494
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1080137-1080189:-1:exon

position:1080137:-1
position: 1080137
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1080189:-1
position: 1080189
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:1078001-1078133:-1:exon

position:1078001:-1
position: 1078001
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1078133:-1
position: 1078133
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:1077296-1077373:-1:exon

position:1077296:-1
position: 1077296
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1077373:-1
position: 1077373
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:1074261-1074409:-1:exon

position:1074261:-1
position: 1074261
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1074409:-1
position: 1074409
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:1071309-1073742:-1:exon

position:1071309:-1
position: 1071309
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1073742:-1
position: 1073742
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:1070050-1070296:-1:exon

position:1070050:-1
position: 1070050
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1070296:-1
position: 1070296
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:1061992-1069184:-1:exon

position:1069184:-1
position: 1069184
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

NFAT5
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8869
gene: NFAT5
product: nuclear factor of activated T cells 5, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 38 long SRA reads, 6 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 7 samples with support for all annotated introns
transcript id: XM_040571708.1
SIO_010081: NFAT5
subclass of: SO_0000673
so part of: NFAT5
location: complement(join(1061992..1069184,1070054..1070296,1071309..1073742,1074261..1074409,1077296..1077376,1078001..1078133,1080137..1080189,1080360..1080494,1082338..1082510,1083785..1083975,1086327..1086519,1091041..1091599,1103665..1103790,1120066..1120207))
location: region:1061992-1120207:-1
so has part: feature:1120066-1120207:-1:exon
so has part: feature:1103665-1103790:-1:exon
so has part: feature:1091041-1091599:-1:exon
so has part: feature:1086327-1086519:-1:exon
so has part: feature:1083785-1083975:-1:exon
so has part: feature:1082338-1082510:-1:exon
so has part: feature:1080360-1080494:-1:exon
so has part: feature:1080137-1080189:-1:exon
so has part: feature:1078001-1078133:-1:exon
so has part: feature:1077296-1077376:-1:exon
so has part: feature:1074261-1074409:-1:exon
so has part: feature:1071309-1073742:-1:exon
so has part: feature:1070054-1070296:-1:exon
so has part: feature:1061992-1069184:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1120066-1120207:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1103665-1103790:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1091041-1091599:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1086327-1086519:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1083785-1083975:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1082338-1082510:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1080360-1080494:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1080137-1080189:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1078001-1078133:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1077296-1077376:-1:exon

position:1077376:-1
position: 1077376
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:1074261-1074409:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1071309-1073742:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1070054-1070296:-1:exon

position:1070054:-1
position: 1070054
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:1061992-1069184:-1:exon

NFAT5
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8869
gene: NFAT5
product: nuclear factor of activated T cells 5, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 41 long SRA reads, 6 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 7 samples with support for all annotated introns
transcript id: XM_040571707.1
SIO_010081: NFAT5
subclass of: SO_0000673
so part of: NFAT5
location: complement(join(1061992..1069184,1070050..1070296,1071309..1073742,1074261..1074409,1077296..1077376,1078001..1078133,1080137..1080189,1080360..1080494,1082338..1082510,1083785..1083975,1086327..1086519,1091041..1091599,1103665..1103790,1120066..1120207))
location: region:1061992-1120207:-1
so has part: feature:1120066-1120207:-1:exon
so has part: feature:1103665-1103790:-1:exon
so has part: feature:1091041-1091599:-1:exon
so has part: feature:1086327-1086519:-1:exon
so has part: feature:1083785-1083975:-1:exon
so has part: feature:1082338-1082510:-1:exon
so has part: feature:1080360-1080494:-1:exon
so has part: feature:1080137-1080189:-1:exon
so has part: feature:1078001-1078133:-1:exon
so has part: feature:1077296-1077376:-1:exon
so has part: feature:1074261-1074409:-1:exon
so has part: feature:1071309-1073742:-1:exon
so has part: feature:1070050-1070296:-1:exon
so has part: feature:1061992-1069184:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1120066-1120207:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1103665-1103790:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1091041-1091599:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1086327-1086519:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1083785-1083975:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1082338-1082510:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1080360-1080494:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1080137-1080189:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1078001-1078133:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1077296-1077376:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1074261-1074409:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1071309-1073742:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1070050-1070296:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1061992-1069184:-1:exon

NFAT5
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8869
gene: NFAT5
product: nuclear factor of activated T cells 5, transcript variant X7
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 41 long SRA reads, 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 6 samples with support for all annotated introns
transcript id: XM_040571714.1
SIO_010081: NFAT5
subclass of: SO_0000673
so part of: NFAT5
location: complement(join(1061992..1069184,1070050..1070296,1071309..1073742,1074261..1074409,1077296..1077376,1078001..1078133,1080137..1080189,1080360..1080494,1082338..1082510,1083785..1083975,1086327..1086519,1091460..1091599,1103665..1103791))
location: region:1061992-1103791:-1
so has part: feature:1103665-1103791:-1:exon
so has part: feature:1091460-1091599:-1:exon
so has part: feature:1086327-1086519:-1:exon
so has part: feature:1083785-1083975:-1:exon
so has part: feature:1082338-1082510:-1:exon
so has part: feature:1080360-1080494:-1:exon
so has part: feature:1080137-1080189:-1:exon
so has part: feature:1078001-1078133:-1:exon
so has part: feature:1077296-1077376:-1:exon
so has part: feature:1074261-1074409:-1:exon
so has part: feature:1071309-1073742:-1:exon
so has part: feature:1070050-1070296:-1:exon
so has part: feature:1061992-1069184:-1:exon

position:1103791:-1
position: 1103791
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1103665-1103791:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1091460-1091599:-1:exon

position:1091460:-1
position: 1091460
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1086327-1086519:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1083785-1083975:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1082338-1082510:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1080360-1080494:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1080137-1080189:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1078001-1078133:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1077296-1077376:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1074261-1074409:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1071309-1073742:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1070050-1070296:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1061992-1069184:-1:exon

NFAT5
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8869
gene: NFAT5
product: nuclear factor of activated T cells 5, transcript variant X6
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 41 long SRA reads, 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 6 samples with support for all annotated introns
transcript id: XM_040571713.1
SIO_010081: NFAT5
subclass of: SO_0000673
so part of: NFAT5
location: complement(join(1061992..1069184,1070050..1070296,1071309..1073742,1074261..1074409,1077296..1077376,1078001..1078133,1080137..1080189,1080360..1080494,1082338..1082510,1083785..1083975,1086327..1086519,1091460..1091599,1092058..1092119,1103665..1103790))
location: region:1061992-1103790:-1
so has part: feature:1103665-1103790:-1:exon
so has part: feature:1092058-1092119:-1:exon
so has part: feature:1091460-1091599:-1:exon
so has part: feature:1086327-1086519:-1:exon
so has part: feature:1083785-1083975:-1:exon
so has part: feature:1082338-1082510:-1:exon
so has part: feature:1080360-1080494:-1:exon
so has part: feature:1080137-1080189:-1:exon
so has part: feature:1078001-1078133:-1:exon
so has part: feature:1077296-1077376:-1:exon
so has part: feature:1074261-1074409:-1:exon
so has part: feature:1071309-1073742:-1:exon
so has part: feature:1070050-1070296:-1:exon
so has part: feature:1061992-1069184:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1103665-1103790:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1092058-1092119:-1:exon

position:1092058:-1
position: 1092058
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1092119:-1
position: 1092119
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1091460-1091599:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1086327-1086519:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1083785-1083975:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1082338-1082510:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1080360-1080494:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1080137-1080189:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1078001-1078133:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1077296-1077376:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1074261-1074409:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1071309-1073742:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1070050-1070296:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1061992-1069184:-1:exon

NFAT5
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8869
gene: NFAT5
product: nuclear factor of activated T cells 5, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 41 long SRA reads, 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 6 samples with support for all annotated introns
transcript id: XM_040571711.1
SIO_010081: NFAT5
subclass of: SO_0000673
so part of: NFAT5
location: complement(join(1061992..1069184,1070050..1070296,1071309..1073742,1074261..1074409,1077296..1077376,1078001..1078133,1080137..1080189,1080360..1080494,1082338..1082510,1083785..1083975,1086327..1086519,1091041..1091599,1092058..1092119,1103665..1103790))
location: region:1061992-1103790:-1
so has part: feature:1103665-1103790:-1:exon
so has part: feature:1092058-1092119:-1:exon
so has part: feature:1091041-1091599:-1:exon
so has part: feature:1086327-1086519:-1:exon
so has part: feature:1083785-1083975:-1:exon
so has part: feature:1082338-1082510:-1:exon
so has part: feature:1080360-1080494:-1:exon
so has part: feature:1080137-1080189:-1:exon
so has part: feature:1078001-1078133:-1:exon
so has part: feature:1077296-1077376:-1:exon
so has part: feature:1074261-1074409:-1:exon
so has part: feature:1071309-1073742:-1:exon
so has part: feature:1070050-1070296:-1:exon
so has part: feature:1061992-1069184:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1103665-1103790:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1092058-1092119:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1091041-1091599:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1086327-1086519:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1083785-1083975:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1082338-1082510:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1080360-1080494:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1080137-1080189:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1078001-1078133:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1077296-1077376:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1074261-1074409:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1071309-1073742:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1070050-1070296:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1061992-1069184:-1:exon

NFAT5
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8869
gene: NFAT5
product: nuclear factor of activated T cells 5, transcript variant X8
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 41 long SRA reads, 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_040571716.1
SIO_010081: NFAT5
subclass of: SO_0000673
so part of: NFAT5
location: complement(join(1061992..1069184,1070050..1070296,1071309..1073742,1074261..1074409,1077296..1077376,1078001..1078133,1080137..1080189,1080360..1080494,1082338..1082510,1083785..1083975,1086327..1086519,1091460..1091599,1092058..1092119,1093880..1094686))
location: region:1061992-1094686:-1
so has part: feature:1093880-1094686:-1:exon
so has part: feature:1092058-1092119:-1:exon
so has part: feature:1091460-1091599:-1:exon
so has part: feature:1086327-1086519:-1:exon
so has part: feature:1083785-1083975:-1:exon
so has part: feature:1082338-1082510:-1:exon
so has part: feature:1080360-1080494:-1:exon
so has part: feature:1080137-1080189:-1:exon
so has part: feature:1078001-1078133:-1:exon
so has part: feature:1077296-1077376:-1:exon
so has part: feature:1074261-1074409:-1:exon
so has part: feature:1071309-1073742:-1:exon
so has part: feature:1070050-1070296:-1:exon
so has part: feature:1061992-1069184:-1:exon

position:1094686:-1
position: 1094686
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1093880-1094686:-1:exon

position:1093880:-1
position: 1093880
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1092058-1092119:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1091460-1091599:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1086327-1086519:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1083785-1083975:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1082338-1082510:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1080360-1080494:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1080137-1080189:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1078001-1078133:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1077296-1077376:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1074261-1074409:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1071309-1073742:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1070050-1070296:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1061992-1069184:-1:exon

NFAT5
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8869
gene: NFAT5
product: nuclear factor of activated T cells 5, transcript variant X5
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 41 long SRA reads, 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XM_040571712.1
SIO_010081: NFAT5
subclass of: SO_0000673
so part of: NFAT5
location: complement(join(1061992..1069184,1070050..1070296,1071309..1073742,1074261..1074409,1077296..1077376,1078001..1078133,1080137..1080189,1080360..1080494,1082338..1082510,1083785..1083975,1086327..1086519,1091041..1091599,1092058..1092119,1093880..1094684))
location: region:1061992-1094684:-1
so has part: feature:1093880-1094684:-1:exon
so has part: feature:1092058-1092119:-1:exon
so has part: feature:1091041-1091599:-1:exon
so has part: feature:1086327-1086519:-1:exon
so has part: feature:1083785-1083975:-1:exon
so has part: feature:1082338-1082510:-1:exon
so has part: feature:1080360-1080494:-1:exon
so has part: feature:1080137-1080189:-1:exon
so has part: feature:1078001-1078133:-1:exon
so has part: feature:1077296-1077376:-1:exon
so has part: feature:1074261-1074409:-1:exon
so has part: feature:1071309-1073742:-1:exon
so has part: feature:1070050-1070296:-1:exon
so has part: feature:1061992-1069184:-1:exon

position:1094684:-1
position: 1094684
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1093880-1094684:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1092058-1092119:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1091041-1091599:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1086327-1086519:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1083785-1083975:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1082338-1082510:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1080360-1080494:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1080137-1080189:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1078001-1078133:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1077296-1077376:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1074261-1074409:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1071309-1073742:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1070050-1070296:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1061992-1069184:-1:exon

NFAT5
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8869
gene: NFAT5
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: nuclear factor of activated T-cells 5 isoform X2
translation: MPSDFISLLSADLDLESPKSLYSKESVYDLLPKELQLPPSRETSVASMSQTSGGEAGSPPPAVVAADASSAPSSSSMGGACSSFTTSSSPTIYSTSVTDSKAMQVESCSSAVGVSNRGVSEKQLTSNTVQQQQSTPKRHTVLYISPPPEDLLDNSRMSCQDEGCGLESEQSCSMWMEDSPSNFSNMSTSSYNDNTEVPRKSRKRNPKQRPGIKRRDCEESNMDIFDADSAKAPHYVLSQLSTDSKGNSKAGNGAPESQKGAGGKKTPMLCGQYPTKSEGKELKIVVQPETQHRARYLTEGSRGSVKDRTQQGFPTVKLEGHNEPVVLQVFVGNDSGRVKPHGFYQACRVTGRNTTPCKEVDIEGTTVIEVGLDPSNNMTLAVDCVGILKLRNADVEARIGIAGSKKKSTRARLVFRVNITRKDGSTLTLQTPSSPILCTQPAGVPEILKKSLHSCSVKGEEEVFLIGKNFLKGTKVIFQENVSDENSWKAEAEIDMELFHQNHLIVKVPPYHDQQITSAVSVGIYVVTNAGRSHDVQPFTYTPDTSGTLNVKVKKEISSPAQHCSFEEAIKAVNATACNPENVNILPSALITPLIPSSMIKNEDVAPMEVSAEKRSPPVFKASKVVGPTQQTLESSMSGIPTSASHLPSESEKQQQIQPKVYNPETLTTIQTQDISQPGSFSAVSTPAQLQNSDTLLQQAAQFQTRDSQTREVLQSDGTVVTLSQLTDGSQTQQSTLSEPAQALQQQISSSIFSSASGVSQLQNTIQQLQAGNFPTNTATGSSRNVDLVQQVLEAQQQLSSVLFSGSESSEDVQDQLNADIFQQVSQIQNSVNPGIFSSSETAVHSRPENLLPGRGENVHSQPENALSNQQQQQQQQQQAMETSAAMVIGIQQNICQAATQMQSDLFSSTTSGNGALQQSPVYQQASHIMSGLSTSEDMQMQCELFSSSPGVSGSETTPTAQQQVSNNGPNMFQASSSADGEEASGQSKQMQNPVFQTMVQMQHSGENQPQVNLFSSTKNMMSVQASGAQQQGGGLFQQGGEIMSIQSANFMQQSAHSQAQLFHSQNPIGDTQNIPQETQGSIFHSPNSIVHNQTSTNSSDQLQPPMFHSQSTMGVLQSSSVPQDQQSANMFLSQSSISNPPSQEEQMSFFTSPNSISPLQAATNTEQPTSFQQQTQIAHIQSSMLPQEQPQTQPAQQGLFQPQVSMGSIQSSSIPQNQQGAIFQPQHSIVAIQSSPPSQEQPQQQQQNMMFSNQSAMSTIASQKQNMIFNPNQNPVTNQEQQGQSIFHPQTNMAPMNQEQQPMQFQSQTTVSSLQNPGSNQAEAQQPAIFHNSPQIQLVQGSPSSQEQQVTLFISSASMSALQNSMSQQELQQTPMFSSQNSMAGMQGTASPPQQQASLFHNTAGGAINQLQNSPASSQQTSGIFLFGIQNNCGQLLPSGPAALPDELMAISQPGQPQGEGQAAVPTLLSQQLPETSPLPSAMAPNQNIEKIDDLLVSLQNQGNNMAGSF
SIO_010081: NFAT5
subclass of: SO_0000673
so part of: NFAT5
location: complement(join(1070058..1070296,1071309..1073742,1074261..1074409,1077296..1077373,1078001..1078133,1080137..1080189,1080360..1080494,1082338..1082510,1083785..1083975,1086327..1086519,1091041..1091599,1103665..1103790,1120066..1120138))
location: region:1070058-1120138:-1
so has part: feature:1120066-1120138:-1:exon
so has part: feature:1103665-1103790:-1:exon
so has part: feature:1091041-1091599:-1:exon
so has part: feature:1086327-1086519:-1:exon
so has part: feature:1083785-1083975:-1:exon
so has part: feature:1082338-1082510:-1:exon
so has part: feature:1080360-1080494:-1:exon
so has part: feature:1080137-1080189:-1:exon
so has part: feature:1078001-1078133:-1:exon
so has part: feature:1077296-1077373:-1:exon
so has part: feature:1074261-1074409:-1:exon
so has part: feature:1071309-1073742:-1:exon
so has part: feature:1070058-1070296:-1:exon

XP_040427644.1
type: Protein
SIO_000068: ncbiprotein

position:1070058:-1
position: 1070058
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1120138:-1
position: 1120138
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1120066-1120138:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1103665-1103790:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1091041-1091599:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1086327-1086519:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1083785-1083975:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1082338-1082510:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1080360-1080494:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1080137-1080189:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1078001-1078133:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1077296-1077373:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1074261-1074409:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1071309-1073742:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1070058-1070296:-1:exon

NFAT5
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8869
gene: NFAT5
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: nuclear factor of activated T-cells 5 isoform X1
translation: MPSDFISLLSADLDLESPKSLYSKESVYDLLPKELQLPPSRETSVASMSQTSGGEAGSPPPAVVAADASSAPSSSSMGGACSSFTTSSSPTIYSTSVTDSKAMQVESCSSAVGVSNRGVSEKQLTSNTVQQQQSTPKRHTVLYISPPPEDLLDNSRMSCQDEGCGLESEQSCSMWMEDSPSNFSNMSTSSYNDNTEVPRKSRKRNPKQRPGIKRRDCEESNMDIFDADSAKAPHYVLSQLSTDSKGNSKAGNGAPESQKGAGGKKTPMLCGQYPTKSEGKELKIVVQPETQHRARYLTEGSRGSVKDRTQQGFPTVKLEGHNEPVVLQVFVGNDSGRVKPHGFYQACRVTGRNTTPCKEVDIEGTTVIEVGLDPSNNMTLAVDCVGILKLRNADVEARIGIAGSKKKSTRARLVFRVNITRKDGSTLTLQTPSSPILCTQPAGVPEILKKSLHSCSVKGEEEVFLIGKNFLKGTKVIFQENVSDENSWKAEAEIDMELFHQNHLIVKVPPYHDQQITSAVSVGIYVVTNAGRSHDVQPFTYTPDTSAGTLNVKVKKEISSPAQHCSFEEAIKAVNATACNPENVNILPSALITPLIPSSMIKNEDVAPMEVSAEKRSPPVFKASKVVGPTQQTLESSMSGIPTSASHLPSESEKQQQIQPKVYNPETLTTIQTQDISQPGSFSAVSTPAQLQNSDTLLQQAAQFQTRDSQTREVLQSDGTVVTLSQLTDGSQTQQSTLSEPAQALQQQISSSIFSSASGVSQLQNTIQQLQAGNFPTNTATGSSRNVDLVQQVLEAQQQLSSVLFSGSESSEDVQDQLNADIFQQVSQIQNSVNPGIFSSSETAVHSRPENLLPGRGENVHSQPENALSNQQQQQQQQQQAMETSAAMVIGIQQNICQAATQMQSDLFSSTTSGNGALQQSPVYQQASHIMSGLSTSEDMQMQCELFSSSPGVSGSETTPTAQQQVSNNGPNMFQASSSADGEEASGQSKQMQNPVFQTMVQMQHSGENQPQVNLFSSTKNMMSVQASGAQQQGGGLFQQGGEIMSIQSANFMQQSAHSQAQLFHSQNPIGDTQNIPQETQGSIFHSPNSIVHNQTSTNSSDQLQPPMFHSQSTMGVLQSSSVPQDQQSANMFLSQSSISNPPSQEEQMSFFTSPNSISPLQAATNTEQPTSFQQQTQIAHIQSSMLPQEQPQTQPAQQGLFQPQVSMGSIQSSSIPQNQQGAIFQPQHSIVAIQSSPPSQEQPQQQQQNMMFSNQSAMSTIASQKQNMIFNPNQNPVTNQEQQGQSIFHPQTNMAPMNQEQQPMQFQSQTTVSSLQNPGSNQAEAQQPAIFHNSPQIQLVQGSPSSQEQQVTLFISSASMSALQNSMSQQELQQTPMFSSQNSMAGMQGTASPPQQQASLFHNTAGGAINQLQNSPASSQQTSGIFLFGIQNNCGQLLPSGPAALPDELMAISQPGQPQGEGQAAVPTLLSQQLPETSPLPSAMAPNQNIEKIDDLLVSLQNQGNNMAGSF
SIO_010081: NFAT5
subclass of: SO_0000673
so part of: NFAT5
location: complement(join(1070058..1070296,1071309..1073742,1074261..1074409,1077296..1077376,1078001..1078133,1080137..1080189,1080360..1080494,1082338..1082510,1083785..1083975,1086327..1086519,1091041..1091599,1103665..1103790,1120066..1120138))
location: region:1070058-1120138:-1
so has part: feature:1120066-1120138:-1:exon
so has part: feature:1103665-1103790:-1:exon
so has part: feature:1091041-1091599:-1:exon
so has part: feature:1086327-1086519:-1:exon
so has part: feature:1083785-1083975:-1:exon
so has part: feature:1082338-1082510:-1:exon
so has part: feature:1080360-1080494:-1:exon
so has part: feature:1080137-1080189:-1:exon
so has part: feature:1078001-1078133:-1:exon
so has part: feature:1077296-1077376:-1:exon
so has part: feature:1074261-1074409:-1:exon
so has part: feature:1071309-1073742:-1:exon
so has part: feature:1070058-1070296:-1:exon

XP_040427641.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1120066-1120138:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1103665-1103790:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1091041-1091599:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1086327-1086519:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1083785-1083975:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1082338-1082510:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1080360-1080494:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1080137-1080189:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1078001-1078133:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1077296-1077376:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1074261-1074409:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1071309-1073742:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1070058-1070296:-1:exon

NFAT5
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8869
gene: NFAT5
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: nuclear factor of activated T-cells 5 isoform X1
translation: MPSDFISLLSADLDLESPKSLYSKESVYDLLPKELQLPPSRETSVASMSQTSGGEAGSPPPAVVAADASSAPSSSSMGGACSSFTTSSSPTIYSTSVTDSKAMQVESCSSAVGVSNRGVSEKQLTSNTVQQQQSTPKRHTVLYISPPPEDLLDNSRMSCQDEGCGLESEQSCSMWMEDSPSNFSNMSTSSYNDNTEVPRKSRKRNPKQRPGIKRRDCEESNMDIFDADSAKAPHYVLSQLSTDSKGNSKAGNGAPESQKGAGGKKTPMLCGQYPTKSEGKELKIVVQPETQHRARYLTEGSRGSVKDRTQQGFPTVKLEGHNEPVVLQVFVGNDSGRVKPHGFYQACRVTGRNTTPCKEVDIEGTTVIEVGLDPSNNMTLAVDCVGILKLRNADVEARIGIAGSKKKSTRARLVFRVNITRKDGSTLTLQTPSSPILCTQPAGVPEILKKSLHSCSVKGEEEVFLIGKNFLKGTKVIFQENVSDENSWKAEAEIDMELFHQNHLIVKVPPYHDQQITSAVSVGIYVVTNAGRSHDVQPFTYTPDTSAGTLNVKVKKEISSPAQHCSFEEAIKAVNATACNPENVNILPSALITPLIPSSMIKNEDVAPMEVSAEKRSPPVFKASKVVGPTQQTLESSMSGIPTSASHLPSESEKQQQIQPKVYNPETLTTIQTQDISQPGSFSAVSTPAQLQNSDTLLQQAAQFQTRDSQTREVLQSDGTVVTLSQLTDGSQTQQSTLSEPAQALQQQISSSIFSSASGVSQLQNTIQQLQAGNFPTNTATGSSRNVDLVQQVLEAQQQLSSVLFSGSESSEDVQDQLNADIFQQVSQIQNSVNPGIFSSSETAVHSRPENLLPGRGENVHSQPENALSNQQQQQQQQQQAMETSAAMVIGIQQNICQAATQMQSDLFSSTTSGNGALQQSPVYQQASHIMSGLSTSEDMQMQCELFSSSPGVSGSETTPTAQQQVSNNGPNMFQASSSADGEEASGQSKQMQNPVFQTMVQMQHSGENQPQVNLFSSTKNMMSVQASGAQQQGGGLFQQGGEIMSIQSANFMQQSAHSQAQLFHSQNPIGDTQNIPQETQGSIFHSPNSIVHNQTSTNSSDQLQPPMFHSQSTMGVLQSSSVPQDQQSANMFLSQSSISNPPSQEEQMSFFTSPNSISPLQAATNTEQPTSFQQQTQIAHIQSSMLPQEQPQTQPAQQGLFQPQVSMGSIQSSSIPQNQQGAIFQPQHSIVAIQSSPPSQEQPQQQQQNMMFSNQSAMSTIASQKQNMIFNPNQNPVTNQEQQGQSIFHPQTNMAPMNQEQQPMQFQSQTTVSSLQNPGSNQAEAQQPAIFHNSPQIQLVQGSPSSQEQQVTLFISSASMSALQNSMSQQELQQTPMFSSQNSMAGMQGTASPPQQQASLFHNTAGGAINQLQNSPASSQQTSGIFLFGIQNNCGQLLPSGPAALPDELMAISQPGQPQGEGQAAVPTLLSQQLPETSPLPSAMAPNQNIEKIDDLLVSLQNQGNNMAGSF
SIO_010081: NFAT5
subclass of: SO_0000673
so part of: NFAT5
location: complement(join(1070058..1070296,1071309..1073742,1074261..1074409,1077296..1077376,1078001..1078133,1080137..1080189,1080360..1080494,1082338..1082510,1083785..1083975,1086327..1086519,1091041..1091599,1103665..1103790,1120066..1120138))
location: region:1070058-1120138:-1
so has part: feature:1120066-1120138:-1:exon
so has part: feature:1103665-1103790:-1:exon
so has part: feature:1091041-1091599:-1:exon
so has part: feature:1086327-1086519:-1:exon
so has part: feature:1083785-1083975:-1:exon
so has part: feature:1082338-1082510:-1:exon
so has part: feature:1080360-1080494:-1:exon
so has part: feature:1080137-1080189:-1:exon
so has part: feature:1078001-1078133:-1:exon
so has part: feature:1077296-1077376:-1:exon
so has part: feature:1074261-1074409:-1:exon
so has part: feature:1071309-1073742:-1:exon
so has part: feature:1070058-1070296:-1:exon

XP_040427642.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1120066-1120138:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1103665-1103790:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1091041-1091599:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1086327-1086519:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1083785-1083975:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1082338-1082510:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1080360-1080494:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1080137-1080189:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1078001-1078133:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1077296-1077376:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1074261-1074409:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1071309-1073742:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1070058-1070296:-1:exon

NFAT5
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8869
gene: NFAT5
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: nuclear factor of activated T-cells 5 isoform X4
translation: MLLQLLPLPPWAVLAAPLPPLPVLPFTLPQSPTARLCKWRAAPQPWGAPESQKGAGGKKTPMLCGQYPTKSEGKELKIVVQPETQHRARYLTEGSRGSVKDRTQQGFPTVKLEGHNEPVVLQVFVGNDSGRVKPHGFYQACRVTGRNTTPCKEVDIEGTTVIEVGLDPSNNMTLAVDCVGILKLRNADVEARIGIAGSKKKSTRARLVFRVNITRKDGSTLTLQTPSSPILCTQPAGVPEILKKSLHSCSVKGEEEVFLIGKNFLKGTKVIFQENVSDENSWKAEAEIDMELFHQNHLIVKVPPYHDQQITSAVSVGIYVVTNAGRSHDVQPFTYTPDTSAGTLNVKVKKEISSPAQHCSFEEAIKAVNATACNPENVNILPSALITPLIPSSMIKNEDVAPMEVSAEKRSPPVFKASKVVGPTQQTLESSMSGIPTSASHLPSESEKQQQIQPKVYNPETLTTIQTQDISQPGSFSAVSTPAQLQNSDTLLQQAAQFQTRDSQTREVLQSDGTVVTLSQLTDGSQTQQSTLSEPAQALQQQISSSIFSSASGVSQLQNTIQQLQAGNFPTNTATGSSRNVDLVQQVLEAQQQLSSVLFSGSESSEDVQDQLNADIFQQVSQIQNSVNPGIFSSSETAVHSRPENLLPGRGENVHSQPENALSNQQQQQQQQQQAMETSAAMVIGIQQNICQAATQMQSDLFSSTTSGNGALQQSPVYQQASHIMSGLSTSEDMQMQCELFSSSPGVSGSETTPTAQQQVSNNGPNMFQASSSADGEEASGQSKQMQNPVFQTMVQMQHSGENQPQVNLFSSTKNMMSVQASGAQQQGGGLFQQGGEIMSIQSANFMQQSAHSQAQLFHSQNPIGDTQNIPQETQGSIFHSPNSIVHNQTSTNSSDQLQPPMFHSQSTMGVLQSSSVPQDQQSANMFLSQSSISNPPSQEEQMSFFTSPNSISPLQAATNTEQPTSFQQQTQIAHIQSSMLPQEQPQTQPAQQGLFQPQVSMGSIQSSSIPQNQQGAIFQPQHSIVAIQSSPPSQEQPQQQQQNMMFSNQSAMSTIASQKQNMIFNPNQNPVTNQEQQGQSIFHPQTNMAPMNQEQQPMQFQSQTTVSSLQNPGSNQAEAQQPAIFHNSPQIQLVQGSPSSQEQQVTLFISSASMSALQNSMSQQELQQTPMFSSQNSMAGMQGTASPPQQQASLFHNTAGGAINQLQNSPASSQQTSGIFLFGIQNNCGQLLPSGPAALPDELMAISQPGQPQGEGQAAVPTLLSQQLPETSPLPSAMAPNQNIEKIDDLLVSLQNQGNNMAGSF
SIO_010081: NFAT5
subclass of: SO_0000673
so part of: NFAT5
location: complement(join(1070058..1070296,1071309..1073742,1074261..1074409,1077296..1077376,1078001..1078133,1080137..1080189,1080360..1080494,1082338..1082510,1083785..1083975,1086327..1086519,1091460..1091599))
location: region:1070058-1091599:-1
so has part: feature:1091460-1091599:-1:exon
so has part: feature:1086327-1086519:-1:exon
so has part: feature:1083785-1083975:-1:exon
so has part: feature:1082338-1082510:-1:exon
so has part: feature:1080360-1080494:-1:exon
so has part: feature:1080137-1080189:-1:exon
so has part: feature:1078001-1078133:-1:exon
so has part: feature:1077296-1077376:-1:exon
so has part: feature:1074261-1074409:-1:exon
so has part: feature:1071309-1073742:-1:exon
so has part: feature:1070058-1070296:-1:exon

XP_040427647.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1091460-1091599:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1086327-1086519:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1083785-1083975:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1082338-1082510:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1080360-1080494:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1080137-1080189:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1078001-1078133:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1077296-1077376:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1074261-1074409:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1071309-1073742:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1070058-1070296:-1:exon

NFAT5
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8869
gene: NFAT5
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: nuclear factor of activated T-cells 5 isoform X4
translation: MLLQLLPLPPWAVLAAPLPPLPVLPFTLPQSPTARLCKWRAAPQPWGAPESQKGAGGKKTPMLCGQYPTKSEGKELKIVVQPETQHRARYLTEGSRGSVKDRTQQGFPTVKLEGHNEPVVLQVFVGNDSGRVKPHGFYQACRVTGRNTTPCKEVDIEGTTVIEVGLDPSNNMTLAVDCVGILKLRNADVEARIGIAGSKKKSTRARLVFRVNITRKDGSTLTLQTPSSPILCTQPAGVPEILKKSLHSCSVKGEEEVFLIGKNFLKGTKVIFQENVSDENSWKAEAEIDMELFHQNHLIVKVPPYHDQQITSAVSVGIYVVTNAGRSHDVQPFTYTPDTSAGTLNVKVKKEISSPAQHCSFEEAIKAVNATACNPENVNILPSALITPLIPSSMIKNEDVAPMEVSAEKRSPPVFKASKVVGPTQQTLESSMSGIPTSASHLPSESEKQQQIQPKVYNPETLTTIQTQDISQPGSFSAVSTPAQLQNSDTLLQQAAQFQTRDSQTREVLQSDGTVVTLSQLTDGSQTQQSTLSEPAQALQQQISSSIFSSASGVSQLQNTIQQLQAGNFPTNTATGSSRNVDLVQQVLEAQQQLSSVLFSGSESSEDVQDQLNADIFQQVSQIQNSVNPGIFSSSETAVHSRPENLLPGRGENVHSQPENALSNQQQQQQQQQQAMETSAAMVIGIQQNICQAATQMQSDLFSSTTSGNGALQQSPVYQQASHIMSGLSTSEDMQMQCELFSSSPGVSGSETTPTAQQQVSNNGPNMFQASSSADGEEASGQSKQMQNPVFQTMVQMQHSGENQPQVNLFSSTKNMMSVQASGAQQQGGGLFQQGGEIMSIQSANFMQQSAHSQAQLFHSQNPIGDTQNIPQETQGSIFHSPNSIVHNQTSTNSSDQLQPPMFHSQSTMGVLQSSSVPQDQQSANMFLSQSSISNPPSQEEQMSFFTSPNSISPLQAATNTEQPTSFQQQTQIAHIQSSMLPQEQPQTQPAQQGLFQPQVSMGSIQSSSIPQNQQGAIFQPQHSIVAIQSSPPSQEQPQQQQQNMMFSNQSAMSTIASQKQNMIFNPNQNPVTNQEQQGQSIFHPQTNMAPMNQEQQPMQFQSQTTVSSLQNPGSNQAEAQQPAIFHNSPQIQLVQGSPSSQEQQVTLFISSASMSALQNSMSQQELQQTPMFSSQNSMAGMQGTASPPQQQASLFHNTAGGAINQLQNSPASSQQTSGIFLFGIQNNCGQLLPSGPAALPDELMAISQPGQPQGEGQAAVPTLLSQQLPETSPLPSAMAPNQNIEKIDDLLVSLQNQGNNMAGSF
SIO_010081: NFAT5
subclass of: SO_0000673
so part of: NFAT5
location: complement(join(1070058..1070296,1071309..1073742,1074261..1074409,1077296..1077376,1078001..1078133,1080137..1080189,1080360..1080494,1082338..1082510,1083785..1083975,1086327..1086519,1091460..1091599))
location: region:1070058-1091599:-1
so has part: feature:1091460-1091599:-1:exon
so has part: feature:1086327-1086519:-1:exon
so has part: feature:1083785-1083975:-1:exon
so has part: feature:1082338-1082510:-1:exon
so has part: feature:1080360-1080494:-1:exon
so has part: feature:1080137-1080189:-1:exon
so has part: feature:1078001-1078133:-1:exon
so has part: feature:1077296-1077376:-1:exon
so has part: feature:1074261-1074409:-1:exon
so has part: feature:1071309-1073742:-1:exon
so has part: feature:1070058-1070296:-1:exon

XP_040427648.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1091460-1091599:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1086327-1086519:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1083785-1083975:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1082338-1082510:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1080360-1080494:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1080137-1080189:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1078001-1078133:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1077296-1077376:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1074261-1074409:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1071309-1073742:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1070058-1070296:-1:exon

NFAT5
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8869
gene: NFAT5
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: nuclear factor of activated T-cells 5 isoform X4
translation: MLLQLLPLPPWAVLAAPLPPLPVLPFTLPQSPTARLCKWRAAPQPWGAPESQKGAGGKKTPMLCGQYPTKSEGKELKIVVQPETQHRARYLTEGSRGSVKDRTQQGFPTVKLEGHNEPVVLQVFVGNDSGRVKPHGFYQACRVTGRNTTPCKEVDIEGTTVIEVGLDPSNNMTLAVDCVGILKLRNADVEARIGIAGSKKKSTRARLVFRVNITRKDGSTLTLQTPSSPILCTQPAGVPEILKKSLHSCSVKGEEEVFLIGKNFLKGTKVIFQENVSDENSWKAEAEIDMELFHQNHLIVKVPPYHDQQITSAVSVGIYVVTNAGRSHDVQPFTYTPDTSAGTLNVKVKKEISSPAQHCSFEEAIKAVNATACNPENVNILPSALITPLIPSSMIKNEDVAPMEVSAEKRSPPVFKASKVVGPTQQTLESSMSGIPTSASHLPSESEKQQQIQPKVYNPETLTTIQTQDISQPGSFSAVSTPAQLQNSDTLLQQAAQFQTRDSQTREVLQSDGTVVTLSQLTDGSQTQQSTLSEPAQALQQQISSSIFSSASGVSQLQNTIQQLQAGNFPTNTATGSSRNVDLVQQVLEAQQQLSSVLFSGSESSEDVQDQLNADIFQQVSQIQNSVNPGIFSSSETAVHSRPENLLPGRGENVHSQPENALSNQQQQQQQQQQAMETSAAMVIGIQQNICQAATQMQSDLFSSTTSGNGALQQSPVYQQASHIMSGLSTSEDMQMQCELFSSSPGVSGSETTPTAQQQVSNNGPNMFQASSSADGEEASGQSKQMQNPVFQTMVQMQHSGENQPQVNLFSSTKNMMSVQASGAQQQGGGLFQQGGEIMSIQSANFMQQSAHSQAQLFHSQNPIGDTQNIPQETQGSIFHSPNSIVHNQTSTNSSDQLQPPMFHSQSTMGVLQSSSVPQDQQSANMFLSQSSISNPPSQEEQMSFFTSPNSISPLQAATNTEQPTSFQQQTQIAHIQSSMLPQEQPQTQPAQQGLFQPQVSMGSIQSSSIPQNQQGAIFQPQHSIVAIQSSPPSQEQPQQQQQNMMFSNQSAMSTIASQKQNMIFNPNQNPVTNQEQQGQSIFHPQTNMAPMNQEQQPMQFQSQTTVSSLQNPGSNQAEAQQPAIFHNSPQIQLVQGSPSSQEQQVTLFISSASMSALQNSMSQQELQQTPMFSSQNSMAGMQGTASPPQQQASLFHNTAGGAINQLQNSPASSQQTSGIFLFGIQNNCGQLLPSGPAALPDELMAISQPGQPQGEGQAAVPTLLSQQLPETSPLPSAMAPNQNIEKIDDLLVSLQNQGNNMAGSF
SIO_010081: NFAT5
subclass of: SO_0000673
so part of: NFAT5
location: complement(join(1070058..1070296,1071309..1073742,1074261..1074409,1077296..1077376,1078001..1078133,1080137..1080189,1080360..1080494,1082338..1082510,1083785..1083975,1086327..1086519,1091460..1091599))
location: region:1070058-1091599:-1
so has part: feature:1091460-1091599:-1:exon
so has part: feature:1086327-1086519:-1:exon
so has part: feature:1083785-1083975:-1:exon
so has part: feature:1082338-1082510:-1:exon
so has part: feature:1080360-1080494:-1:exon
so has part: feature:1080137-1080189:-1:exon
so has part: feature:1078001-1078133:-1:exon
so has part: feature:1077296-1077376:-1:exon
so has part: feature:1074261-1074409:-1:exon
so has part: feature:1071309-1073742:-1:exon
so has part: feature:1070058-1070296:-1:exon

XP_040427650.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1091460-1091599:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1086327-1086519:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1083785-1083975:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1082338-1082510:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1080360-1080494:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1080137-1080189:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1078001-1078133:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1077296-1077376:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1074261-1074409:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1071309-1073742:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1070058-1070296:-1:exon

NFAT5
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8869
gene: NFAT5
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: nuclear factor of activated T-cells 5 isoform X3
translation: MGGACSSFTTSSSPTIYSTSVTDSKAMQVESCSSAVGVSNRGVSEKQLTSNTVQQQQSTPKRHTVLYISPPPEDLLDNSRMSCQDEGCGLESEQSCSMWMEDSPSNFSNMSTSSYNDNTEVPRKSRKRNPKQRPGIKRRDCEESNMDIFDADSAKAPHYVLSQLSTDSKGNSKAGNGAPESQKGAGGKKTPMLCGQYPTKSEGKELKIVVQPETQHRARYLTEGSRGSVKDRTQQGFPTVKLEGHNEPVVLQVFVGNDSGRVKPHGFYQACRVTGRNTTPCKEVDIEGTTVIEVGLDPSNNMTLAVDCVGILKLRNADVEARIGIAGSKKKSTRARLVFRVNITRKDGSTLTLQTPSSPILCTQPAGVPEILKKSLHSCSVKGEEEVFLIGKNFLKGTKVIFQENVSDENSWKAEAEIDMELFHQNHLIVKVPPYHDQQITSAVSVGIYVVTNAGRSHDVQPFTYTPDTSAGTLNVKVKKEISSPAQHCSFEEAIKAVNATACNPENVNILPSALITPLIPSSMIKNEDVAPMEVSAEKRSPPVFKASKVVGPTQQTLESSMSGIPTSASHLPSESEKQQQIQPKVYNPETLTTIQTQDISQPGSFSAVSTPAQLQNSDTLLQQAAQFQTRDSQTREVLQSDGTVVTLSQLTDGSQTQQSTLSEPAQALQQQISSSIFSSASGVSQLQNTIQQLQAGNFPTNTATGSSRNVDLVQQVLEAQQQLSSVLFSGSESSEDVQDQLNADIFQQVSQIQNSVNPGIFSSSETAVHSRPENLLPGRGENVHSQPENALSNQQQQQQQQQQAMETSAAMVIGIQQNICQAATQMQSDLFSSTTSGNGALQQSPVYQQASHIMSGLSTSEDMQMQCELFSSSPGVSGSETTPTAQQQVSNNGPNMFQASSSADGEEASGQSKQMQNPVFQTMVQMQHSGENQPQVNLFSSTKNMMSVQASGAQQQGGGLFQQGGEIMSIQSANFMQQSAHSQAQLFHSQNPIGDTQNIPQETQGSIFHSPNSIVHNQTSTNSSDQLQPPMFHSQSTMGVLQSSSVPQDQQSANMFLSQSSISNPPSQEEQMSFFTSPNSISPLQAATNTEQPTSFQQQTQIAHIQSSMLPQEQPQTQPAQQGLFQPQVSMGSIQSSSIPQNQQGAIFQPQHSIVAIQSSPPSQEQPQQQQQNMMFSNQSAMSTIASQKQNMIFNPNQNPVTNQEQQGQSIFHPQTNMAPMNQEQQPMQFQSQTTVSSLQNPGSNQAEAQQPAIFHNSPQIQLVQGSPSSQEQQVTLFISSASMSALQNSMSQQELQQTPMFSSQNSMAGMQGTASPPQQQASLFHNTAGGAINQLQNSPASSQQTSGIFLFGIQNNCGQLLPSGPAALPDELMAISQPGQPQGEGQAAVPTLLSQQLPETSPLPSAMAPNQNIEKIDDLLVSLQNQGNNMAGSF
SIO_010081: NFAT5
subclass of: SO_0000673
so part of: NFAT5
location: complement(join(1070058..1070296,1071309..1073742,1074261..1074409,1077296..1077376,1078001..1078133,1080137..1080189,1080360..1080494,1082338..1082510,1083785..1083975,1086327..1086519,1091041..1091570))
location: region:1070058-1091570:-1
so has part: feature:1091041-1091570:-1:exon
so has part: feature:1086327-1086519:-1:exon
so has part: feature:1083785-1083975:-1:exon
so has part: feature:1082338-1082510:-1:exon
so has part: feature:1080360-1080494:-1:exon
so has part: feature:1080137-1080189:-1:exon
so has part: feature:1078001-1078133:-1:exon
so has part: feature:1077296-1077376:-1:exon
so has part: feature:1074261-1074409:-1:exon
so has part: feature:1071309-1073742:-1:exon
so has part: feature:1070058-1070296:-1:exon

XP_040427645.1
type: Protein
SIO_000068: ncbiprotein

position:1091570:-1
position: 1091570
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1091041-1091570:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1086327-1086519:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1083785-1083975:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1082338-1082510:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1080360-1080494:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1080137-1080189:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1078001-1078133:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1077296-1077376:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1074261-1074409:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1071309-1073742:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1070058-1070296:-1:exon

NFAT5
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8869
gene: NFAT5
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: nuclear factor of activated T-cells 5 isoform X3
translation: MGGACSSFTTSSSPTIYSTSVTDSKAMQVESCSSAVGVSNRGVSEKQLTSNTVQQQQSTPKRHTVLYISPPPEDLLDNSRMSCQDEGCGLESEQSCSMWMEDSPSNFSNMSTSSYNDNTEVPRKSRKRNPKQRPGIKRRDCEESNMDIFDADSAKAPHYVLSQLSTDSKGNSKAGNGAPESQKGAGGKKTPMLCGQYPTKSEGKELKIVVQPETQHRARYLTEGSRGSVKDRTQQGFPTVKLEGHNEPVVLQVFVGNDSGRVKPHGFYQACRVTGRNTTPCKEVDIEGTTVIEVGLDPSNNMTLAVDCVGILKLRNADVEARIGIAGSKKKSTRARLVFRVNITRKDGSTLTLQTPSSPILCTQPAGVPEILKKSLHSCSVKGEEEVFLIGKNFLKGTKVIFQENVSDENSWKAEAEIDMELFHQNHLIVKVPPYHDQQITSAVSVGIYVVTNAGRSHDVQPFTYTPDTSAGTLNVKVKKEISSPAQHCSFEEAIKAVNATACNPENVNILPSALITPLIPSSMIKNEDVAPMEVSAEKRSPPVFKASKVVGPTQQTLESSMSGIPTSASHLPSESEKQQQIQPKVYNPETLTTIQTQDISQPGSFSAVSTPAQLQNSDTLLQQAAQFQTRDSQTREVLQSDGTVVTLSQLTDGSQTQQSTLSEPAQALQQQISSSIFSSASGVSQLQNTIQQLQAGNFPTNTATGSSRNVDLVQQVLEAQQQLSSVLFSGSESSEDVQDQLNADIFQQVSQIQNSVNPGIFSSSETAVHSRPENLLPGRGENVHSQPENALSNQQQQQQQQQQAMETSAAMVIGIQQNICQAATQMQSDLFSSTTSGNGALQQSPVYQQASHIMSGLSTSEDMQMQCELFSSSPGVSGSETTPTAQQQVSNNGPNMFQASSSADGEEASGQSKQMQNPVFQTMVQMQHSGENQPQVNLFSSTKNMMSVQASGAQQQGGGLFQQGGEIMSIQSANFMQQSAHSQAQLFHSQNPIGDTQNIPQETQGSIFHSPNSIVHNQTSTNSSDQLQPPMFHSQSTMGVLQSSSVPQDQQSANMFLSQSSISNPPSQEEQMSFFTSPNSISPLQAATNTEQPTSFQQQTQIAHIQSSMLPQEQPQTQPAQQGLFQPQVSMGSIQSSSIPQNQQGAIFQPQHSIVAIQSSPPSQEQPQQQQQNMMFSNQSAMSTIASQKQNMIFNPNQNPVTNQEQQGQSIFHPQTNMAPMNQEQQPMQFQSQTTVSSLQNPGSNQAEAQQPAIFHNSPQIQLVQGSPSSQEQQVTLFISSASMSALQNSMSQQELQQTPMFSSQNSMAGMQGTASPPQQQASLFHNTAGGAINQLQNSPASSQQTSGIFLFGIQNNCGQLLPSGPAALPDELMAISQPGQPQGEGQAAVPTLLSQQLPETSPLPSAMAPNQNIEKIDDLLVSLQNQGNNMAGSF
SIO_010081: NFAT5
subclass of: SO_0000673
so part of: NFAT5
location: complement(join(1070058..1070296,1071309..1073742,1074261..1074409,1077296..1077376,1078001..1078133,1080137..1080189,1080360..1080494,1082338..1082510,1083785..1083975,1086327..1086519,1091041..1091570))
location: region:1070058-1091570:-1
so has part: feature:1091041-1091570:-1:exon
so has part: feature:1086327-1086519:-1:exon
so has part: feature:1083785-1083975:-1:exon
so has part: feature:1082338-1082510:-1:exon
so has part: feature:1080360-1080494:-1:exon
so has part: feature:1080137-1080189:-1:exon
so has part: feature:1078001-1078133:-1:exon
so has part: feature:1077296-1077376:-1:exon
so has part: feature:1074261-1074409:-1:exon
so has part: feature:1071309-1073742:-1:exon
so has part: feature:1070058-1070296:-1:exon

XP_040427646.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1091041-1091570:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1086327-1086519:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1083785-1083975:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1082338-1082510:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1080360-1080494:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1080137-1080189:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1078001-1078133:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1077296-1077376:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1074261-1074409:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1071309-1073742:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1070058-1070296:-1:exon

LOC121076704
type: Gene
subclass of: SO_0000704
RO_0002162: 8869
gene: LOC121076704
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1129280..1140714)
location: region:1129280-1140714:-1
so has part: feature:1129280-1140714:-1:exon
subclass of: SO_0000010

121076704
type: Gene
SIO_000068: ncbigene

position:1129280:-1
position: 1129280
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1140714:-1
position: 1140714
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1129280-1140714:-1:exon

LOC121076704
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8869
gene: LOC121076704
product: cytochrome b5
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 43 long SRA reads, 16 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 12 samples with support for all annotated introns
transcript id: XM_040571263.1
SIO_010081: LOC121076704
subclass of: SO_0000673
so part of: LOC121076704
location: complement(join(1129280..1130054,1131092..1131123,1132865..1132891,1133426..1133554,1140498..1140714))
location: region:1129280-1140714:-1
so has part: feature:1140498-1140714:-1:exon
so has part: feature:1133426-1133554:-1:exon
so has part: feature:1132865-1132891:-1:exon
so has part: feature:1131092-1131123:-1:exon
so has part: feature:1129280-1130054:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1140498-1140714:-1:exon

position:1140498:-1
position: 1140498
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1133426-1133554:-1:exon

position:1133426:-1
position: 1133426
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1133554:-1
position: 1133554
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1132865-1132891:-1:exon

position:1132865:-1
position: 1132865
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1132891:-1
position: 1132891
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1131092-1131123:-1:exon

position:1131092:-1
position: 1131092
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1131123:-1
position: 1131123
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1129280-1130054:-1:exon

position:1130054:-1
position: 1130054
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC121076704
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8869
gene: LOC121076704
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: cytochrome b5
translation: MEGGKRAEGGGEAAAAGPVFTLQEVARRNGGREAWLVIHGRVYDVTRFLEEHPGGEEVLLEQAGKDATESFEDVGHSTDAREMLKQYYIGEVHPHDRKKEGSKDQNMTSSGQASFWSTWLIPIFGALVIGLMYRYYMLEGRSS
SIO_010081: LOC121076704
subclass of: SO_0000673
so part of: LOC121076704
location: complement(join(1129964..1130054,1131092..1131123,1132865..1132891,1133426..1133554,1140498..1140650))
location: region:1129964-1140650:-1
so has part: feature:1140498-1140650:-1:exon
so has part: feature:1133426-1133554:-1:exon
so has part: feature:1132865-1132891:-1:exon
so has part: feature:1131092-1131123:-1:exon
so has part: feature:1129964-1130054:-1:exon

XP_040427197.1
type: Protein
SIO_000068: ncbiprotein

position:1129964:-1
position: 1129964
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1140650:-1
position: 1140650
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1140498-1140650:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1133426-1133554:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1132865-1132891:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1131092-1131123:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1129964-1130054:-1:exon

TERF2
type: Gene
subclass of: SO_0000704
RO_0002162: 8869
gene: TERF2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1142379..1149996
location: region:1142379-1149996:1
so has part: feature:1142379-1149996:1:exon
subclass of: SO_0000010

121076571
type: Gene
SIO_000068: ncbigene

position:1142379:1
position: 1142379
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1149996:1
position: 1149996
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1142379-1149996:1:exon

TERF2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8869
gene: TERF2
product: telomeric repeat binding factor 2, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 long SRA reads, and 99% coverage of the annotated genomic feature by RNAseq alignments, including 12 samples with support for all annotated introns
transcript id: XM_040570999.1
SIO_010081: TERF2
subclass of: SO_0000673
so part of: TERF2
location: join(1142379..1142645,1142916..1143011,1143176..1143306,1143588..1143674,1144213..1144359,1144768..1145813,1147253..1147338,1148042..1148094,1149027..1149996)
location: region:1142379-1149996:1
so has part: feature:1142379-1142645:1:exon
so has part: feature:1142916-1143011:1:exon
so has part: feature:1143176-1143306:1:exon
so has part: feature:1143588-1143674:1:exon
so has part: feature:1144213-1144359:1:exon
so has part: feature:1144768-1145813:1:exon
so has part: feature:1147253-1147338:1:exon
so has part: feature:1148042-1148094:1:exon
so has part: feature:1149027-1149996:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1142379-1142645:1:exon

position:1142645:1
position: 1142645
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1142916-1143011:1:exon

position:1142916:1
position: 1142916
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1143011:1
position: 1143011
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1143176-1143306:1:exon

position:1143176:1
position: 1143176
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1143306:1
position: 1143306
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1143588-1143674:1:exon

position:1143588:1
position: 1143588
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1143674:1
position: 1143674
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1144213-1144359:1:exon

position:1144213:1
position: 1144213
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1144359:1
position: 1144359
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1144768-1145813:1:exon

position:1144768:1
position: 1144768
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1145813:1
position: 1145813
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1147253-1147338:1:exon

position:1147253:1
position: 1147253
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1147338:1
position: 1147338
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1148042-1148094:1:exon

position:1148042:1
position: 1148042
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1148094:1
position: 1148094
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:1149027-1149996:1:exon

position:1149027:1
position: 1149027
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

TERF2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8869
gene: TERF2
product: telomeric repeat binding factor 2, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 long SRA reads, 3 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments, including 12 samples with support for all annotated introns
transcript id: XM_040571000.1
SIO_010081: TERF2
subclass of: SO_0000673
so part of: TERF2
location: join(1142381..1142582,1142916..1143011,1143176..1143306,1143588..1143674,1144213..1144359,1144768..1145813,1147253..1147338,1148042..1148094,1149027..1149996)
location: region:1142381-1149996:1
so has part: feature:1142381-1142582:1:exon
so has part: feature:1142916-1143011:1:exon
so has part: feature:1143176-1143306:1:exon
so has part: feature:1143588-1143674:1:exon
so has part: feature:1144213-1144359:1:exon
so has part: feature:1144768-1145813:1:exon
so has part: feature:1147253-1147338:1:exon
so has part: feature:1148042-1148094:1:exon
so has part: feature:1149027-1149996:1:exon

position:1142381:1
position: 1142381
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1142381-1142582:1:exon

position:1142582:1
position: 1142582
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1142916-1143011:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1143176-1143306:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1143588-1143674:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1144213-1144359:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1144768-1145813:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1147253-1147338:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1148042-1148094:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1149027-1149996:1:exon

TERF2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8869
gene: TERF2
product: telomeric repeat binding factor 2, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 34 long SRA reads, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 12 samples with support for all annotated introns
transcript id: XM_040571001.1
SIO_010081: TERF2
subclass of: SO_0000673
so part of: TERF2
location: join(1142383..1142645,1142916..1143011,1143176..1143306,1143588..1143674,1144213..1144359,1144768..1145141,1145430..1145813,1147253..1147338,1148042..1148094,1149027..1149996)
location: region:1142383-1149996:1
so has part: feature:1142383-1142645:1:exon
so has part: feature:1142916-1143011:1:exon
so has part: feature:1143176-1143306:1:exon
so has part: feature:1143588-1143674:1:exon
so has part: feature:1144213-1144359:1:exon
so has part: feature:1144768-1145141:1:exon
so has part: feature:1145430-1145813:1:exon
so has part: feature:1147253-1147338:1:exon
so has part: feature:1148042-1148094:1:exon
so has part: feature:1149027-1149996:1:exon

position:1142383:1
position: 1142383
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1142383-1142645:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1142916-1143011:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1143176-1143306:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1143588-1143674:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1144213-1144359:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1144768-1145141:1:exon

position:1145141:1
position: 1145141
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1145430-1145813:1:exon

position:1145430:1
position: 1145430
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1147253-1147338:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1148042-1148094:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1149027-1149996:1:exon

TERF2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8869
gene: TERF2
product: telomeric repeat binding factor 2, transcript variant X5
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 36 long SRA reads, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 12 samples with support for all annotated introns
transcript id: XM_040571003.1
SIO_010081: TERF2
subclass of: SO_0000673
so part of: TERF2
location: join(1142383..1142645,1142916..1143011,1143176..1143306,1143588..1143674,1144213..1144359,1144768..1145141,1145586..1145813,1147253..1147338,1148042..1148094,1149027..1149996)
location: region:1142383-1149996:1
so has part: feature:1142383-1142645:1:exon
so has part: feature:1142916-1143011:1:exon
so has part: feature:1143176-1143306:1:exon
so has part: feature:1143588-1143674:1:exon
so has part: feature:1144213-1144359:1:exon
so has part: feature:1144768-1145141:1:exon
so has part: feature:1145586-1145813:1:exon
so has part: feature:1147253-1147338:1:exon
so has part: feature:1148042-1148094:1:exon
so has part: feature:1149027-1149996:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1142383-1142645:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1142916-1143011:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1143176-1143306:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1143588-1143674:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1144213-1144359:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1144768-1145141:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1145586-1145813:1:exon

position:1145586:1
position: 1145586
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1147253-1147338:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1148042-1148094:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1149027-1149996:1:exon

TERF2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8869
gene: TERF2
product: telomeric repeat binding factor 2, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 7 long SRA reads, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 6 samples with support for all annotated introns
transcript id: XM_040571002.1
SIO_010081: TERF2
subclass of: SO_0000673
so part of: TERF2
location: join(1142383..1142645,1143176..1143306,1143588..1143674,1144213..1144359,1144768..1145141,1145430..1145813,1147253..1147338,1148042..1148094,1149027..1149996)
location: region:1142383-1149996:1
so has part: feature:1142383-1142645:1:exon
so has part: feature:1143176-1143306:1:exon
so has part: feature:1143588-1143674:1:exon
so has part: feature:1144213-1144359:1:exon
so has part: feature:1144768-1145141:1:exon
so has part: feature:1145430-1145813:1:exon
so has part: feature:1147253-1147338:1:exon
so has part: feature:1148042-1148094:1:exon
so has part: feature:1149027-1149996:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1142383-1142645:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1143176-1143306:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1143588-1143674:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1144213-1144359:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1144768-1145141:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1145430-1145813:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1147253-1147338:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1148042-1148094:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1149027-1149996:1:exon

TERF2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8869
gene: TERF2
product: telomeric repeat binding factor 2, transcript variant X8
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 long SRA reads, 6 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 12 samples with support for all annotated introns
transcript id: XM_040571006.1
SIO_010081: TERF2
subclass of: SO_0000673
so part of: TERF2
location: join(1142384..1142582,1142916..1143011,1143176..1143306,1143588..1143674,1144213..1144359,1144768..1145141,1145430..1145813,1147253..1147338,1148042..1148094,1149027..1149996)
location: region:1142384-1149996:1
so has part: feature:1142384-1142582:1:exon
so has part: feature:1142916-1143011:1:exon
so has part: feature:1143176-1143306:1:exon
so has part: feature:1143588-1143674:1:exon
so has part: feature:1144213-1144359:1:exon
so has part: feature:1144768-1145141:1:exon
so has part: feature:1145430-1145813:1:exon
so has part: feature:1147253-1147338:1:exon
so has part: feature:1148042-1148094:1:exon
so has part: feature:1149027-1149996:1:exon

position:1142384:1
position: 1142384
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1142384-1142582:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1142916-1143011:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1143176-1143306:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1143588-1143674:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1144213-1144359:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1144768-1145141:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1145430-1145813:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1147253-1147338:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1148042-1148094:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1149027-1149996:1:exon

TERF2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8869
gene: TERF2
product: telomeric repeat binding factor 2, transcript variant X6
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 7 long SRA reads, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 6 samples with support for all annotated introns
transcript id: XM_040571004.1
SIO_010081: TERF2
subclass of: SO_0000673
so part of: TERF2
location: join(1142384..1142582,1143176..1143306,1143588..1143674,1144213..1144359,1144768..1145141,1145430..1145813,1147253..1147338,1148042..1148094,1149027..1149996)
location: region:1142384-1149996:1
so has part: feature:1142384-1142582:1:exon
so has part: feature:1143176-1143306:1:exon
so has part: feature:1143588-1143674:1:exon
so has part: feature:1144213-1144359:1:exon
so has part: feature:1144768-1145141:1:exon
so has part: feature:1145430-1145813:1:exon
so has part: feature:1147253-1147338:1:exon
so has part: feature:1148042-1148094:1:exon
so has part: feature:1149027-1149996:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1142384-1142582:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1143176-1143306:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1143588-1143674:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1144213-1144359:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1144768-1145141:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1145430-1145813:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1147253-1147338:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1148042-1148094:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1149027-1149996:1:exon

TERF2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8869
gene: TERF2
product: telomeric repeat binding factor 2, transcript variant X7
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 8 long SRA reads, 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 12 samples with support for all annotated introns
transcript id: XM_040571005.1
SIO_010081: TERF2
subclass of: SO_0000673
so part of: TERF2
location: join(1142385..1142582,1142916..1143011,1143176..1143306,1143588..1143674,1144213..1144359,1144768..1145141,1145586..1145813,1147253..1147338,1148042..1148094,1149027..1149996)
location: region:1142385-1149996:1
so has part: feature:1142385-1142582:1:exon
so has part: feature:1142916-1143011:1:exon
so has part: feature:1143176-1143306:1:exon
so has part: feature:1143588-1143674:1:exon
so has part: feature:1144213-1144359:1:exon
so has part: feature:1144768-1145141:1:exon
so has part: feature:1145586-1145813:1:exon
so has part: feature:1147253-1147338:1:exon
so has part: feature:1148042-1148094:1:exon
so has part: feature:1149027-1149996:1:exon

position:1142385:1
position: 1142385
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1142385-1142582:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1142916-1143011:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1143176-1143306:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1143588-1143674:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1144213-1144359:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1144768-1145141:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1145586-1145813:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1147253-1147338:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1148042-1148094:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1149027-1149996:1:exon

TERF2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8869
gene: TERF2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: telomeric repeat-binding factor 2 isoform X1
translation: MAGERARGAGGRREKAAAAAAARGEEAMNRWVLQFYFHQAVAAYRAGRNRDFRQLRDVMQGTPGLAAGGRARRGARPRAPAALLVRPLEKHPPVVQLLRVMQFLSRIEEGENLDCSFDREMELTPLESAMGILQLFQKEFSVPEKKVEPVQKMLKEAAVIVCIRNREFDKASAILKRHMGKDPRVQKKKAELQAIIREKNHAHPMIRDFSYGDFQQDMFQFLKTYVDSSEPVLVTMMKTLNSERAEEPKRSSAAPGSASGARDQAAAPKPVGMEQDPAGAPKPAETAEDTAVPPSPAERAEDPAGAPEPMEESSYPAAAPEHIIAAVKNLEDVSERMEIPEQAAAAAPELAEVPSRDSERWAEKSGPMWWVKVGGRSHLLSWSGGWCPRASDGSRAPRGVSVCVGGLGVPSSGGVSTLGSWRIVEGHTAGEKPDVSDVGAVGVKHLQAAQFCLFCRQPSGTVTTYGISVLREAFKILSDSRDSDALFTKLDETDFSFPKQLSPSVSHRNKRRKEEENQDSEISDPPEIPNKVKRLTISKLVMEQDNQSNESSESPDSSQEPVVSSASKSVQKLPNQHESTESAKSRKGKWSSLYTEEQKDSWSDEEELFSGVALLEQNGHNSGVFGSKKQKWTVQESEWIKEGVKKYGEGRWKSICQKYPFQNRTSVMIKDRWRTMKRLGML
SIO_010081: TERF2
subclass of: SO_0000673
so part of: TERF2
location: join(1142402..1142645,1142916..1143011,1143176..1143306,1143588..1143674,1144213..1144359,1144768..1145813,1147253..1147338,1148042..1148094,1149027..1149185)
location: region:1142402-1149185:1
so has part: feature:1142402-1142645:1:exon
so has part: feature:1142916-1143011:1:exon
so has part: feature:1143176-1143306:1:exon
so has part: feature:1143588-1143674:1:exon
so has part: feature:1144213-1144359:1:exon
so has part: feature:1144768-1145813:1:exon
so has part: feature:1147253-1147338:1:exon
so has part: feature:1148042-1148094:1:exon
so has part: feature:1149027-1149185:1:exon

XP_040426933.1
type: Protein
SIO_000068: ncbiprotein

position:1142402:1
position: 1142402
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1149185:1
position: 1149185
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1142402-1142645:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1142916-1143011:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1143176-1143306:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1143588-1143674:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1144213-1144359:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1144768-1145813:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1147253-1147338:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1148042-1148094:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1149027-1149185:1:exon

TERF2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8869
gene: TERF2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: telomeric repeat-binding factor 2 isoform X3
translation: MAGERARGAGGRREKAAAAAAARGEEAMNRWVLQFYFHQAVAAYRAGRNRDFRQLRDVMQGTPGLAAGGRARRGARPRAPAALLVRPLEKHPPVVQLLRVMQFLSRIEEGENLDCSFDREMELTPLESAMGILQLFQKEFSVPEKKVEPVQKMLKEAAVIVCIRNREFDKASAILKRHMGKDPRVQKKKAELQAIIREKNHAHPMIRDFSYGDFQQDMFQFLKTYVDSSEPVLVTMMKTLNSERAEEPKRSSAAPGSASGARDQAAAPKPVGMEQDPAGAPKPAETAEDTAVPPSPAERAEDPAGAPEPMEESSYPAAAPEHIIAAVKNLEDVSERMEIPEQAAAAAPELAEVPSRDSERQPSGTVTTYGISVLREAFKILSDSRDSDALFTKLDETDFSFPKQLSPSVSHRNKRRKEEENQDSEISDPPEIPNKVKRLTISKLVMEQDNQSNESSESPDSSQEPVVSSASKSVQKLPNQHESTESAKSRKGKWSSLYTEEQKDSWSDEEELFSGVALLEQNGHNSGVFGSKKQKWTVQESEWIKEGVKKYGEGRWKSICQKYPFQNRTSVMIKDRWRTMKRLGML
SIO_010081: TERF2
subclass of: SO_0000673
so part of: TERF2
location: join(1142402..1142645,1142916..1143011,1143176..1143306,1143588..1143674,1144213..1144359,1144768..1145141,1145430..1145813,1147253..1147338,1148042..1148094,1149027..1149185)
location: region:1142402-1149185:1
so has part: feature:1142402-1142645:1:exon
so has part: feature:1142916-1143011:1:exon
so has part: feature:1143176-1143306:1:exon
so has part: feature:1143588-1143674:1:exon
so has part: feature:1144213-1144359:1:exon
so has part: feature:1144768-1145141:1:exon
so has part: feature:1145430-1145813:1:exon
so has part: feature:1147253-1147338:1:exon
so has part: feature:1148042-1148094:1:exon
so has part: feature:1149027-1149185:1:exon

XP_040426935.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1142402-1142645:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1142916-1143011:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1143176-1143306:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1143588-1143674:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1144213-1144359:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1144768-1145141:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1145430-1145813:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1147253-1147338:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1148042-1148094:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1149027-1149185:1:exon

TERF2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8869
gene: TERF2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: telomeric repeat-binding factor 2 isoform X5
translation: MAGERARGAGGRREKAAAAAAARGEEAMNRWVLQFYFHQAVAAYRAGRNRDFRQLRDVMQGTPGLAAGGRARRGARPRAPAALLVRPLEKHPPVVQLLRVMQFLSRIEEGENLDCSFDREMELTPLESAMGILQLFQKEFSVPEKKVEPVQKMLKEAAVIVCIRNREFDKASAILKRHMGKDPRVQKKKAELQAIIREKNHAHPMIRDFSYGDFQQDMFQFLKTYVDSSEPVLVTMMKTLNSERAEEPKRSSAAPGSASGARDQAAAPKPVGMEQDPAGAPKPAETAEDTAVPPSPAERAEDPAGAPEPMEESSYPAAAPEHIIAAVKNLEDVSERMEIPEQAAAAAPELAEVPSRDSERNKRRKEEENQDSEISDPPEIPNKVKRLTISKLVMEQDNQSNESSESPDSSQEPVVSSASKSVQKLPNQHESTESAKSRKGKWSSLYTEEQKDSWSDEEELFSGVALLEQNGHNSGVFGSKKQKWTVQESEWIKEGVKKYGEGRWKSICQKYPFQNRTSVMIKDRWRTMKRLGML
SIO_010081: TERF2
subclass of: SO_0000673
so part of: TERF2
location: join(1142402..1142645,1142916..1143011,1143176..1143306,1143588..1143674,1144213..1144359,1144768..1145141,1145586..1145813,1147253..1147338,1148042..1148094,1149027..1149185)
location: region:1142402-1149185:1
so has part: feature:1142402-1142645:1:exon
so has part: feature:1142916-1143011:1:exon
so has part: feature:1143176-1143306:1:exon
so has part: feature:1143588-1143674:1:exon
so has part: feature:1144213-1144359:1:exon
so has part: feature:1144768-1145141:1:exon
so has part: feature:1145586-1145813:1:exon
so has part: feature:1147253-1147338:1:exon
so has part: feature:1148042-1148094:1:exon
so has part: feature:1149027-1149185:1:exon

XP_040426937.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1142402-1142645:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1142916-1143011:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1143176-1143306:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1143588-1143674:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1144213-1144359:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1144768-1145141:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1145586-1145813:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1147253-1147338:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1148042-1148094:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1149027-1149185:1:exon

TERF2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8869
gene: TERF2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: telomeric repeat-binding factor 2 isoform X4
translation: MAGERARGAGGRREKAAAAAAARGEEAMNRWVLQFYFHQAVAAYRAGRNRDFRQLRDVMQGTPGLAAGGRARRGARPRAPADCSFDREMELTPLESAMGILQLFQKEFSVPEKKVEPVQKMLKEAAVIVCIRNREFDKASAILKRHMGKDPRVQKKKAELQAIIREKNHAHPMIRDFSYGDFQQDMFQFLKTYVDSSEPVLVTMMKTLNSERAEEPKRSSAAPGSASGARDQAAAPKPVGMEQDPAGAPKPAETAEDTAVPPSPAERAEDPAGAPEPMEESSYPAAAPEHIIAAVKNLEDVSERMEIPEQAAAAAPELAEVPSRDSERQPSGTVTTYGISVLREAFKILSDSRDSDALFTKLDETDFSFPKQLSPSVSHRNKRRKEEENQDSEISDPPEIPNKVKRLTISKLVMEQDNQSNESSESPDSSQEPVVSSASKSVQKLPNQHESTESAKSRKGKWSSLYTEEQKDSWSDEEELFSGVALLEQNGHNSGVFGSKKQKWTVQESEWIKEGVKKYGEGRWKSICQKYPFQNRTSVMIKDRWRTMKRLGML
SIO_010081: TERF2
subclass of: SO_0000673
so part of: TERF2
location: join(1142402..1142645,1143176..1143306,1143588..1143674,1144213..1144359,1144768..1145141,1145430..1145813,1147253..1147338,1148042..1148094,1149027..1149185)
location: region:1142402-1149185:1
so has part: feature:1142402-1142645:1:exon
so has part: feature:1143176-1143306:1:exon
so has part: feature:1143588-1143674:1:exon
so has part: feature:1144213-1144359:1:exon
so has part: feature:1144768-1145141:1:exon
so has part: feature:1145430-1145813:1:exon
so has part: feature:1147253-1147338:1:exon
so has part: feature:1148042-1148094:1:exon
so has part: feature:1149027-1149185:1:exon

XP_040426936.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1142402-1142645:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1143176-1143306:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1143588-1143674:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1144213-1144359:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1144768-1145141:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1145430-1145813:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1147253-1147338:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1148042-1148094:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1149027-1149185:1:exon

TERF2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8869
gene: TERF2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: telomeric repeat-binding factor 2 isoform X2
translation: MAGERARGAGGRREKAAAAAAARGEEAMNRWVLQFYFHQAVAAYRAGRNRDFRQLRDVMQALLVRPLEKHPPVVQLLRVMQFLSRIEEGENLDCSFDREMELTPLESAMGILQLFQKEFSVPEKKVEPVQKMLKEAAVIVCIRNREFDKASAILKRHMGKDPRVQKKKAELQAIIREKNHAHPMIRDFSYGDFQQDMFQFLKTYVDSSEPVLVTMMKTLNSERAEEPKRSSAAPGSASGARDQAAAPKPVGMEQDPAGAPKPAETAEDTAVPPSPAERAEDPAGAPEPMEESSYPAAAPEHIIAAVKNLEDVSERMEIPEQAAAAAPELAEVPSRDSERWAEKSGPMWWVKVGGRSHLLSWSGGWCPRASDGSRAPRGVSVCVGGLGVPSSGGVSTLGSWRIVEGHTAGEKPDVSDVGAVGVKHLQAAQFCLFCRQPSGTVTTYGISVLREAFKILSDSRDSDALFTKLDETDFSFPKQLSPSVSHRNKRRKEEENQDSEISDPPEIPNKVKRLTISKLVMEQDNQSNESSESPDSSQEPVVSSASKSVQKLPNQHESTESAKSRKGKWSSLYTEEQKDSWSDEEELFSGVALLEQNGHNSGVFGSKKQKWTVQESEWIKEGVKKYGEGRWKSICQKYPFQNRTSVMIKDRWRTMKRLGML
SIO_010081: TERF2
subclass of: SO_0000673
so part of: TERF2
location: join(1142402..1142582,1142916..1143011,1143176..1143306,1143588..1143674,1144213..1144359,1144768..1145813,1147253..1147338,1148042..1148094,1149027..1149185)
location: region:1142402-1149185:1
so has part: feature:1142402-1142582:1:exon
so has part: feature:1142916-1143011:1:exon
so has part: feature:1143176-1143306:1:exon
so has part: feature:1143588-1143674:1:exon
so has part: feature:1144213-1144359:1:exon
so has part: feature:1144768-1145813:1:exon
so has part: feature:1147253-1147338:1:exon
so has part: feature:1148042-1148094:1:exon
so has part: feature:1149027-1149185:1:exon

XP_040426934.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1142402-1142582:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1142916-1143011:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1143176-1143306:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1143588-1143674:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1144213-1144359:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1144768-1145813:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1147253-1147338:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1148042-1148094:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1149027-1149185:1:exon

TERF2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8869
gene: TERF2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: telomeric repeat-binding factor 2 isoform X8
translation: MAGERARGAGGRREKAAAAAAARGEEAMNRWVLQFYFHQAVAAYRAGRNRDFRQLRDVMQALLVRPLEKHPPVVQLLRVMQFLSRIEEGENLDCSFDREMELTPLESAMGILQLFQKEFSVPEKKVEPVQKMLKEAAVIVCIRNREFDKASAILKRHMGKDPRVQKKKAELQAIIREKNHAHPMIRDFSYGDFQQDMFQFLKTYVDSSEPVLVTMMKTLNSERAEEPKRSSAAPGSASGARDQAAAPKPVGMEQDPAGAPKPAETAEDTAVPPSPAERAEDPAGAPEPMEESSYPAAAPEHIIAAVKNLEDVSERMEIPEQAAAAAPELAEVPSRDSERQPSGTVTTYGISVLREAFKILSDSRDSDALFTKLDETDFSFPKQLSPSVSHRNKRRKEEENQDSEISDPPEIPNKVKRLTISKLVMEQDNQSNESSESPDSSQEPVVSSASKSVQKLPNQHESTESAKSRKGKWSSLYTEEQKDSWSDEEELFSGVALLEQNGHNSGVFGSKKQKWTVQESEWIKEGVKKYGEGRWKSICQKYPFQNRTSVMIKDRWRTMKRLGML
SIO_010081: TERF2
subclass of: SO_0000673
so part of: TERF2
location: join(1142402..1142582,1142916..1143011,1143176..1143306,1143588..1143674,1144213..1144359,1144768..1145141,1145430..1145813,1147253..1147338,1148042..1148094,1149027..1149185)
location: region:1142402-1149185:1
so has part: feature:1142402-1142582:1:exon
so has part: feature:1142916-1143011:1:exon
so has part: feature:1143176-1143306:1:exon
so has part: feature:1143588-1143674:1:exon
so has part: feature:1144213-1144359:1:exon
so has part: feature:1144768-1145141:1:exon
so has part: feature:1145430-1145813:1:exon
so has part: feature:1147253-1147338:1:exon
so has part: feature:1148042-1148094:1:exon
so has part: feature:1149027-1149185:1:exon

XP_040426940.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1142402-1142582:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1142916-1143011:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1143176-1143306:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1143588-1143674:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1144213-1144359:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1144768-1145141:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1145430-1145813:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1147253-1147338:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1148042-1148094:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1149027-1149185:1:exon

TERF2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8869
gene: TERF2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: telomeric repeat-binding factor 2 isoform X7
translation: MAGERARGAGGRREKAAAAAAARGEEAMNRWVLQFYFHQAVAAYRAGRNRDFRQLRDVMQALLVRPLEKHPPVVQLLRVMQFLSRIEEGENLDCSFDREMELTPLESAMGILQLFQKEFSVPEKKVEPVQKMLKEAAVIVCIRNREFDKASAILKRHMGKDPRVQKKKAELQAIIREKNHAHPMIRDFSYGDFQQDMFQFLKTYVDSSEPVLVTMMKTLNSERAEEPKRSSAAPGSASGARDQAAAPKPVGMEQDPAGAPKPAETAEDTAVPPSPAERAEDPAGAPEPMEESSYPAAAPEHIIAAVKNLEDVSERMEIPEQAAAAAPELAEVPSRDSERNKRRKEEENQDSEISDPPEIPNKVKRLTISKLVMEQDNQSNESSESPDSSQEPVVSSASKSVQKLPNQHESTESAKSRKGKWSSLYTEEQKDSWSDEEELFSGVALLEQNGHNSGVFGSKKQKWTVQESEWIKEGVKKYGEGRWKSICQKYPFQNRTSVMIKDRWRTMKRLGML
SIO_010081: TERF2
subclass of: SO_0000673
so part of: TERF2
location: join(1142402..1142582,1142916..1143011,1143176..1143306,1143588..1143674,1144213..1144359,1144768..1145141,1145586..1145813,1147253..1147338,1148042..1148094,1149027..1149185)
location: region:1142402-1149185:1
so has part: feature:1142402-1142582:1:exon
so has part: feature:1142916-1143011:1:exon
so has part: feature:1143176-1143306:1:exon
so has part: feature:1143588-1143674:1:exon
so has part: feature:1144213-1144359:1:exon
so has part: feature:1144768-1145141:1:exon
so has part: feature:1145586-1145813:1:exon
so has part: feature:1147253-1147338:1:exon
so has part: feature:1148042-1148094:1:exon
so has part: feature:1149027-1149185:1:exon

XP_040426939.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1142402-1142582:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1142916-1143011:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1143176-1143306:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1143588-1143674:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1144213-1144359:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1144768-1145141:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1145586-1145813:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1147253-1147338:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1148042-1148094:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1149027-1149185:1:exon

TERF2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8869
gene: TERF2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: telomeric repeat-binding factor 2 isoform X6
translation: MAGERARGAGGRREKAAAAAAARGEEAMNRWVLQFYFHQAVAAYRAGRNRDFRQLRDVMQDCSFDREMELTPLESAMGILQLFQKEFSVPEKKVEPVQKMLKEAAVIVCIRNREFDKASAILKRHMGKDPRVQKKKAELQAIIREKNHAHPMIRDFSYGDFQQDMFQFLKTYVDSSEPVLVTMMKTLNSERAEEPKRSSAAPGSASGARDQAAAPKPVGMEQDPAGAPKPAETAEDTAVPPSPAERAEDPAGAPEPMEESSYPAAAPEHIIAAVKNLEDVSERMEIPEQAAAAAPELAEVPSRDSERQPSGTVTTYGISVLREAFKILSDSRDSDALFTKLDETDFSFPKQLSPSVSHRNKRRKEEENQDSEISDPPEIPNKVKRLTISKLVMEQDNQSNESSESPDSSQEPVVSSASKSVQKLPNQHESTESAKSRKGKWSSLYTEEQKDSWSDEEELFSGVALLEQNGHNSGVFGSKKQKWTVQESEWIKEGVKKYGEGRWKSICQKYPFQNRTSVMIKDRWRTMKRLGML
SIO_010081: TERF2
subclass of: SO_0000673
so part of: TERF2
location: join(1142402..1142582,1143176..1143306,1143588..1143674,1144213..1144359,1144768..1145141,1145430..1145813,1147253..1147338,1148042..1148094,1149027..1149185)
location: region:1142402-1149185:1
so has part: feature:1142402-1142582:1:exon
so has part: feature:1143176-1143306:1:exon
so has part: feature:1143588-1143674:1:exon
so has part: feature:1144213-1144359:1:exon
so has part: feature:1144768-1145141:1:exon
so has part: feature:1145430-1145813:1:exon
so has part: feature:1147253-1147338:1:exon
so has part: feature:1148042-1148094:1:exon
so has part: feature:1149027-1149185:1:exon

XP_040426938.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1142402-1142582:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1143176-1143306:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1143588-1143674:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1144213-1144359:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1144768-1145141:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1145430-1145813:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1147253-1147338:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1148042-1148094:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1149027-1149185:1:exon

TMED6
type: Gene
subclass of: SO_0000704
RO_0002162: 8869
gene: TMED6
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1150476..1154075
location: region:1150476-1154075:1
so has part: feature:1150476-1154075:1:exon
subclass of: SO_0000010

121076901
type: Gene
SIO_000068: ncbigene

position:1150476:1
position: 1150476
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1154075:1
position: 1154075
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1150476-1154075:1:exon

TMED6
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8869
gene: TMED6
product: transmembrane p24 trafficking protein 6
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 89% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_040571545.1
SIO_010081: TMED6
subclass of: SO_0000673
so part of: TMED6
location: join(1150476..1150550,1151389..1151601,1152846..1152972,1153139..1153290,1153639..1154075)
location: region:1150476-1154075:1
so has part: feature:1150476-1150550:1:exon
so has part: feature:1151389-1151601:1:exon
so has part: feature:1152846-1152972:1:exon
so has part: feature:1153139-1153290:1:exon
so has part: feature:1153639-1154075:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1150476-1150550:1:exon

position:1150550:1
position: 1150550
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1151389-1151601:1:exon

position:1151389:1
position: 1151389
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1151601:1
position: 1151601
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1152846-1152972:1:exon

position:1152846:1
position: 1152846
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1152972:1
position: 1152972
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1153139-1153290:1:exon

position:1153139:1
position: 1153139
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1153290:1
position: 1153290
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1153639-1154075:1:exon

position:1153639:1
position: 1153639
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

TMED6
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8869
gene: TMED6
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: transmembrane emp24 domain-containing protein 6
translation: MAVCQRGRRNLQHPRKGRLCRDGKSAGSSMLLLALLLLVPPGPAGCPRTEPLSGSSDEPLFRGADRYDFAVIVPAGAAECFWQFAHQSGNFFFSYEVQRATGFANSRIILATASDPNGFQIGASQDVRGQINFPTRETGFYQLCLDNQHNHFGFMQVYLNFGVYYDGFNVEREQPAERRQLNDTLEAIGVSIHKLQLHIFHMWRFYNFARMRKGADSFLLESNYHYVNCWSMAQSCVIVLSGVLQLYFLKRLFNVQGSSKPRC
SIO_010081: TMED6
subclass of: SO_0000673
so part of: TMED6
location: join(1150476..1150550,1151389..1151601,1152846..1152972,1153139..1153290,1153639..1153863)
location: region:1150476-1153863:1
so has part: feature:1150476-1150550:1:exon
so has part: feature:1151389-1151601:1:exon
so has part: feature:1152846-1152972:1:exon
so has part: feature:1153139-1153290:1:exon
so has part: feature:1153639-1153863:1:exon

XP_040427479.1
type: Protein
SIO_000068: ncbiprotein

position:1153863:1
position: 1153863
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1150476-1150550:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1151389-1151601:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1152846-1152972:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1153139-1153290:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1153639-1153863:1:exon

NIP7
type: Gene
subclass of: SO_0000704
RO_0002162: 8869
gene: NIP7
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1154466..1156665)
location: region:1154466-1156665:-1
so has part: feature:1154466-1156665:-1:exon
subclass of: SO_0000010

121076570
type: Gene
SIO_000068: ncbigene

position:1154466:-1
position: 1154466
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1156665:-1
position: 1156665
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1154466-1156665:-1:exon

NIP7
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8869
gene: NIP7
product: nucleolar pre-rRNA processing protein NIP7, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 long SRA reads, 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 12 samples with support for all annotated introns
transcript id: XM_040570998.1
SIO_010081: NIP7
subclass of: SO_0000673
so part of: NIP7
location: complement(join(1154466..1154757,1154835..1154975,1155048..1155186,1155262..1155348,1156497..1156665))
location: region:1154466-1156665:-1
so has part: feature:1156497-1156665:-1:exon
so has part: feature:1155262-1155348:-1:exon
so has part: feature:1155048-1155186:-1:exon
so has part: feature:1154835-1154975:-1:exon
so has part: feature:1154466-1154757:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1156497-1156665:-1:exon

position:1156497:-1
position: 1156497
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1155262-1155348:-1:exon

position:1155262:-1
position: 1155262
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1155348:-1
position: 1155348
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1155048-1155186:-1:exon

position:1155048:-1
position: 1155048
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1155186:-1
position: 1155186
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1154835-1154975:-1:exon

position:1154835:-1
position: 1154835
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1154975:-1
position: 1154975
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1154466-1154757:-1:exon

position:1154757:-1
position: 1154757
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

NIP7
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8869
gene: NIP7
product: nucleolar pre-rRNA processing protein NIP7, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 long SRA reads, and 92% coverage of the annotated genomic feature by RNAseq alignments, including 12 samples with support for all annotated introns
transcript id: XM_040570996.1
SIO_010081: NIP7
subclass of: SO_0000673
so part of: NIP7
location: complement(join(1154466..1154757,1154835..1155186,1155262..1155348,1156497..1156655))
location: region:1154466-1156655:-1
so has part: feature:1156497-1156655:-1:exon
so has part: feature:1155262-1155348:-1:exon
so has part: feature:1154835-1155186:-1:exon
so has part: feature:1154466-1154757:-1:exon

position:1156655:-1
position: 1156655
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1156497-1156655:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1155262-1155348:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1154835-1155186:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1154466-1154757:-1:exon

NIP7
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8869
gene: NIP7
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: 60S ribosome subunit biogenesis protein NIP7 homolog isoform X2
translation: MRPLTEAETRAVFEKLGRYIGENIQLLVERPDGTYCFRLHRDRVYYVSEKLLKGAASIPRDSLVALGTCFGKFTKTQKFRLNVTALDFLAPYAKYKVWVKPGSEQSFLYGNHVLKSGLGRITENTAQYQGVVVYSMADVPLGFGVAAKSTQDCRKVDPMAIVVFHQADVGEYVRSEDTLT
SIO_010081: NIP7
subclass of: SO_0000673
so part of: NIP7
location: complement(join(1154638..1154757,1154835..1154975,1155048..1155186,1155262..1155348,1156497..1156552))
location: region:1154638-1156552:-1
so has part: feature:1156497-1156552:-1:exon
so has part: feature:1155262-1155348:-1:exon
so has part: feature:1155048-1155186:-1:exon
so has part: feature:1154835-1154975:-1:exon
so has part: feature:1154638-1154757:-1:exon

XP_040426932.1
type: Protein
SIO_000068: ncbiprotein

position:1154638:-1
position: 1154638
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1156552:-1
position: 1156552
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1156497-1156552:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1155262-1155348:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1155048-1155186:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1154835-1154975:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1154638-1154757:-1:exon

NIP7
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8869
gene: NIP7
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: 60S ribosome subunit biogenesis protein NIP7 homolog isoform X1
translation: MRPLTEAETRAVFEKLGRYIGENIQLLVERPDGTYCFRLHRDRVYYVSEKLLKGAASIPRDSLVALGTCFGKFTKTQKFRLNVTALDFLAPYAKVGRAPPAGSAPRPPGRSLMAPLLQYKVWVKPGSEQSFLYGNHVLKSGLGRITENTAQYQGVVVYSMADVPLGFGVAAKSTQDCRKVDPMAIVVFHQADVGEYVRSEDTLT
SIO_010081: NIP7
subclass of: SO_0000673
so part of: NIP7
location: complement(join(1154638..1154757,1154835..1155186,1155262..1155348,1156497..1156552))
location: region:1154638-1156552:-1
so has part: feature:1156497-1156552:-1:exon
so has part: feature:1155262-1155348:-1:exon
so has part: feature:1154835-1155186:-1:exon
so has part: feature:1154638-1154757:-1:exon

XP_040426930.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1156497-1156552:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1155262-1155348:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1154835-1155186:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1154638-1154757:-1:exon

COG8
type: Gene
subclass of: SO_0000704
RO_0002162: 8869
gene: COG8
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1156688..1159278
location: region:1156688-1159278:1
so has part: feature:1156688-1159278:1:exon
subclass of: SO_0000010

121076572
type: Gene
SIO_000068: ncbigene

position:1156688:1
position: 1156688
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1159278:1
position: 1159278
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1156688-1159278:1:exon

COG8
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8869
gene: COG8
product: component of oligomeric golgi complex 8
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 long SRA reads, 9 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments, including 12 samples with support for all annotated introns
transcript id: XM_040571008.1
SIO_010081: COG8
subclass of: SO_0000673
so part of: COG8
location: join(1156688..1157001,1157136..1157343,1157506..1158324,1158531..1158699,1158789..1159278)
location: region:1156688-1159278:1
so has part: feature:1156688-1157001:1:exon
so has part: feature:1157136-1157343:1:exon
so has part: feature:1157506-1158324:1:exon
so has part: feature:1158531-1158699:1:exon
so has part: feature:1158789-1159278:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1156688-1157001:1:exon

position:1157001:1
position: 1157001
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1157136-1157343:1:exon

position:1157136:1
position: 1157136
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1157343:1
position: 1157343
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1157506-1158324:1:exon

position:1157506:1
position: 1157506
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1158324:1
position: 1158324
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1158531-1158699:1:exon

position:1158531:1
position: 1158531
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1158699:1
position: 1158699
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1158789-1159278:1:exon

position:1158789:1
position: 1158789
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

COG8
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8869
gene: COG8
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: conserved oligomeric Golgi complex subunit 8
translation: MAAEEARLLAWLRGPAAAGPGGAQLSAYVAELAALGLAELGREPARLAAERARVGAETRRLAFEHYRAFIRSAECTGRAGRGFGGIESRLGSLLDRLPALQDACRNFVRDAEAIACSRRMNSLTLNRHTEILEILEIPQLMDTCVRNRYYEEALELAAYVRRLEKKHSSIPVIQGIVAEVRQSTQLMLNELIQQLRTNIPLPTCLRVIGYLRRMDVFTEAELRIKFLQARDAWLRSIQASIPEDDPYFHLTKTVETCRVHLFDIVTQYRAIFSDEEPLLAPDQPTLNEGAIFHGWVLQKVSEFLQVLERDLQRGVGGRLDSLLGQCMYFGLSFSRVGADFRGQLAPIFQRVAAATFSEAVEEAVEKFQEEMNSYTLISAPAVLGSAAAVPIPTAQPGTLQPPMVLLDFPPLACFLNGLLVAFNDLRLCCPIALAQDVAACLQDALSKVTKIILAFHRAEEAAFSGREQELFVQFCTAFLEDLLPYLNRCLQVLFPPAQIAQALGVPPAQLQRFGRLGCVDVAAIRELLAAVLPAREAEPLPGEEEPVLQSAVPAAAPCPPQQQEEGAVVGEPPAAQGQEDPTDPAAGALLPDAPPAVS
SIO_010081: COG8
subclass of: SO_0000673
so part of: COG8
location: join(1156688..1157001,1157136..1157343,1157506..1158324,1158531..1158699,1158789..1159075)
location: region:1156688-1159075:1
so has part: feature:1156688-1157001:1:exon
so has part: feature:1157136-1157343:1:exon
so has part: feature:1157506-1158324:1:exon
so has part: feature:1158531-1158699:1:exon
so has part: feature:1158789-1159075:1:exon

XP_040426942.1
type: Protein
SIO_000068: ncbiprotein

position:1159075:1
position: 1159075
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1156688-1157001:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1157136-1157343:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1157506-1158324:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1158531-1158699:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1158789-1159075:1:exon

PDF
type: Gene
subclass of: SO_0000704
RO_0002162: 8869
gene: PDF
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1159378..1160410
location: region:1159378-1160410:1
so has part: feature:1159378-1160410:1:exon
subclass of: SO_0000010

121076574
type: Gene
SIO_000068: ncbigene

position:1159378:1
position: 1159378
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1160410:1
position: 1160410
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1159378-1160410:1:exon

PDF
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8869
gene: PDF
product: peptide deformylase, mitochondrial
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 12 samples with support for all annotated introns
transcript id: XM_040571010.1
SIO_010081: PDF
subclass of: SO_0000673
so part of: PDF
location: join(1159378..1159918,1160000..1160410)
location: region:1159378-1160410:1
so has part: feature:1159378-1159918:1:exon
so has part: feature:1160000-1160410:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1159378-1159918:1:exon

position:1159918:1
position: 1159918
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1160000-1160410:1:exon

position:1160000:1
position: 1160000
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

PDF
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8869
gene: PDF
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: peptide deformylase, mitochondrial
translation: MAVAVRRLRPVAAPGGSRCCGAASWGARERSYWQALRRRVLGPPVPPFSEPCQVGTPVLRAPAAAVPAEQLGSPELRALAAALASGLRRGPCVGLSAPQLGVPLRVFAAELSPARCSRYPAALRSAQRIEPFPLRVLVNPALRVLDARLVTAPEGCASLRGFSACVPRHWAVHVSGVDESGQPVSWEASGWAARVIQHELDHLDGVLFIDRMDSRTFANTAWSQLLD
SIO_010081: PDF
subclass of: SO_0000673
so part of: PDF
location: join(1159393..1159918,1160000..1160157)
location: region:1159393-1160157:1
so has part: feature:1159393-1159918:1:exon
so has part: feature:1160000-1160157:1:exon

XP_040426944.1
type: Protein
SIO_000068: ncbiprotein

position:1159393:1
position: 1159393
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1160157:1
position: 1160157
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1159393-1159918:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1160000-1160157:1:exon

VPS4A
type: Gene
subclass of: SO_0000704
RO_0002162: 8869
gene: VPS4A
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1160404..1163684)
location: region:1160404-1163684:-1
so has part: feature:1160404-1163684:-1:exon
subclass of: SO_0000010

121076573
type: Gene
SIO_000068: ncbigene

position:1160404:-1
position: 1160404
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1163684:-1
position: 1163684
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1160404-1163684:-1:exon

VPS4A
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8869
gene: VPS4A
product: vacuolar protein sorting 4 homolog A
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 long SRA reads, 10 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 12 samples with support for all annotated introns
transcript id: XM_040571009.1
SIO_010081: VPS4A
subclass of: SO_0000673
so part of: VPS4A
location: complement(join(1160404..1160837,1161136..1161276,1161370..1161589,1161714..1161795,1161921..1162069,1162235..1162391,1162574..1162693,1162866..1162927,1163017..1163164,1163246..1163357,1163527..1163684))
location: region:1160404-1163684:-1
so has part: feature:1163527-1163684:-1:exon
so has part: feature:1163246-1163357:-1:exon
so has part: feature:1163017-1163164:-1:exon
so has part: feature:1162866-1162927:-1:exon
so has part: feature:1162574-1162693:-1:exon
so has part: feature:1162235-1162391:-1:exon
so has part: feature:1161921-1162069:-1:exon
so has part: feature:1161714-1161795:-1:exon
so has part: feature:1161370-1161589:-1:exon
so has part: feature:1161136-1161276:-1:exon
so has part: feature:1160404-1160837:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1163527-1163684:-1:exon

position:1163527:-1
position: 1163527
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1163246-1163357:-1:exon

position:1163246:-1
position: 1163246
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1163357:-1
position: 1163357
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1163017-1163164:-1:exon

position:1163017:-1
position: 1163017
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1163164:-1
position: 1163164
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1162866-1162927:-1:exon

position:1162866:-1
position: 1162866
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1162927:-1
position: 1162927
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1162574-1162693:-1:exon

position:1162574:-1
position: 1162574
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1162693:-1
position: 1162693
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1162235-1162391:-1:exon

position:1162235:-1
position: 1162235
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1162391:-1
position: 1162391
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1161921-1162069:-1:exon

position:1161921:-1
position: 1161921
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1162069:-1
position: 1162069
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1161714-1161795:-1:exon

position:1161714:-1
position: 1161714
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1161795:-1
position: 1161795
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:1161370-1161589:-1:exon

position:1161370:-1
position: 1161370
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1161589:-1
position: 1161589
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:1161136-1161276:-1:exon

position:1161136:-1
position: 1161136
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1161276:-1
position: 1161276
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:1160404-1160837:-1:exon

position:1160837:-1
position: 1160837
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

VPS4A
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8869
gene: VPS4A
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: vacuolar protein sorting-associated protein 4A
translation: MTTSTLQKAIDLVTKATEEDKAKNYEEALRLYQHAVEYFLHAIKYEAQSDKAKESIRAKCMQYLDRAEKLKDYLRSKERQGRKPVKEAQNDNKGSDSDSEGENPEKKKLQEQLMGAIMMEKPNVRWSDVAGLEGAKEALKEAVILPIKFPHLFTGKRTPWRGILLFGPPGTGKSYLAKAVATEANNSTFFSVSSSDLMSKWLGESEKLVKNLFELARQHKPSIIFIDEVDSLCGSRNENESEAARRIKTEFLVQMQGVGNSSDGILVLGATNIPWVLDSAIRRRFEKRIYIPLPEEAARAQMFKLHLGNTPHSLTDANIHELARKTEGYSGADISIIVRDALMQPVRKVQSAMHFKKVRGPSRTNPNLIVDDLLTPCSPGDPGAIEMTWMEVPSDKLMEPIVCMSDMLRSLATTRPTVNAEDLLKVKKFTEDFGQEG
SIO_010081: VPS4A
subclass of: SO_0000673
so part of: VPS4A
location: complement(join(1160736..1160837,1161136..1161276,1161370..1161589,1161714..1161795,1161921..1162069,1162235..1162391,1162574..1162693,1162866..1162927,1163017..1163164,1163246..1163357,1163527..1163547))
location: region:1160736-1163547:-1
so has part: feature:1163527-1163547:-1:exon
so has part: feature:1163246-1163357:-1:exon
so has part: feature:1163017-1163164:-1:exon
so has part: feature:1162866-1162927:-1:exon
so has part: feature:1162574-1162693:-1:exon
so has part: feature:1162235-1162391:-1:exon
so has part: feature:1161921-1162069:-1:exon
so has part: feature:1161714-1161795:-1:exon
so has part: feature:1161370-1161589:-1:exon
so has part: feature:1161136-1161276:-1:exon
so has part: feature:1160736-1160837:-1:exon

XP_040426943.1
type: Protein
SIO_000068: ncbiprotein

position:1160736:-1
position: 1160736
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1163547:-1
position: 1163547
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1163527-1163547:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1163246-1163357:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1163017-1163164:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1162866-1162927:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1162574-1162693:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1162235-1162391:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1161921-1162069:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1161714-1161795:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1161370-1161589:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1161136-1161276:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1160736-1160837:-1:exon

SNTB2
type: Gene
subclass of: SO_0000704
RO_0002162: 8869
gene: SNTB2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1165253..1170991)
location: region:1165253-1170991:-1
so has part: feature:1165253-1170991:-1:exon
subclass of: SO_0000010

121076796
type: Gene
SIO_000068: ncbigene

position:1165253:-1
position: 1165253
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1170991:-1
position: 1170991
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1165253-1170991:-1:exon

SNTB2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8869
gene: SNTB2
product: syntrophin beta 2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 7 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 12 samples with support for all annotated introns
transcript id: XM_040571402.1
SIO_010081: SNTB2
subclass of: SO_0000673
so part of: SNTB2
location: complement(join(1165253..1165518,1165619..1165800,1166125..1166321,1166406..1166548,1166676..1166877,1167155..1167365,1170519..1170991))
location: region:1165253-1170991:-1
so has part: feature:1170519-1170991:-1:exon
so has part: feature:1167155-1167365:-1:exon
so has part: feature:1166676-1166877:-1:exon
so has part: feature:1166406-1166548:-1:exon
so has part: feature:1166125-1166321:-1:exon
so has part: feature:1165619-1165800:-1:exon
so has part: feature:1165253-1165518:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1170519-1170991:-1:exon

position:1170519:-1
position: 1170519
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1167155-1167365:-1:exon

position:1167155:-1
position: 1167155
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1167365:-1
position: 1167365
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1166676-1166877:-1:exon

position:1166676:-1
position: 1166676
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1166877:-1
position: 1166877
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1166406-1166548:-1:exon

position:1166406:-1
position: 1166406
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1166548:-1
position: 1166548
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1166125-1166321:-1:exon

position:1166125:-1
position: 1166125
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1166321:-1
position: 1166321
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1165619-1165800:-1:exon

position:1165619:-1
position: 1165619
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1165800:-1
position: 1165800
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1165253-1165518:-1:exon

position:1165518:-1
position: 1165518
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

SNTB2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8869
gene: SNTB2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: beta-2-syntrophin
translation: MAVWTRAAKAGLLELLLRERWVRVAAELSGEALSLTAEPGEPAAEQLNGVPNGGGAAEPAGSGGTGGGVRRVRVVKAEAGGLGISIKGGRENRMPVLISRIFPGLAAERSGELRLGDAILAVNGVDLRDATHDQAVQALKRAGREVVLEVKFMREVTPYIKKPSLVSDLPWEGAAPQSPSLSGSEDSGSPKHHGARDRKVIPLKMCFAARNLSMPDLENRLIELHSPDSRNTLILRCKDTATAHSWFTALHANITALLPQVLAELNATLGGGAGGREVKHIAWLAEQARLDGGRQQWRPVLMAVTEKDLLLYDAMPWTRDAWASPCHSYPLVATRLVHSGSGRRSPSLGSDLTFATRTGSRQGIEMHVFRVETHRDLSCWTRVLVQGCHAAAELIKEVSVGCTLGGQEVKLCIHYEGGFTVCREEGGGSVLFRYPYEKLKMSADDGIRTLYLDFGGPEGELALDLHSCPKPIVFILHTFLSAKVTRMGLLV
SIO_010081: SNTB2
subclass of: SO_0000673
so part of: SNTB2
location: complement(join(1165426..1165518,1165619..1165800,1166125..1166321,1166406..1166548,1166676..1166877,1167155..1167365,1170519..1170966))
location: region:1165426-1170966:-1
so has part: feature:1170519-1170966:-1:exon
so has part: feature:1167155-1167365:-1:exon
so has part: feature:1166676-1166877:-1:exon
so has part: feature:1166406-1166548:-1:exon
so has part: feature:1166125-1166321:-1:exon
so has part: feature:1165619-1165800:-1:exon
so has part: feature:1165426-1165518:-1:exon

XP_040427336.1
type: Protein
SIO_000068: ncbiprotein

position:1165426:-1
position: 1165426
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1170966:-1
position: 1170966
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1170519-1170966:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1167155-1167365:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1166676-1166877:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1166406-1166548:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1166125-1166321:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1165619-1165800:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1165426-1165518:-1:exon

UTP4
type: Gene
subclass of: SO_0000704
RO_0002162: 8869
gene: UTP4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1171750..1177067)
location: region:1171750-1177067:-1
so has part: feature:1171750-1177067:-1:exon
subclass of: SO_0000010

121076727
type: Gene
SIO_000068: ncbigene

position:1171750:-1
position: 1171750
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1177067:-1
position: 1177067
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1171750-1177067:-1:exon

UTP4
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8869
gene: UTP4
product: UTP4 small subunit processome component
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 22 long SRA reads, 9 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 12 samples with support for all annotated introns
transcript id: XM_040571295.1
SIO_010081: UTP4
subclass of: SO_0000673
so part of: UTP4
location: complement(join(1171750..1171894,1172026..1172136,1172340..1172525,1172668..1172763,1172944..1173050,1173251..1173410,1173554..1173676,1173855..1173919,1174296..1174392,1174686..1174777,1174869..1175040,1175119..1175330,1175594..1175683,1175803..1175887,1175976..1176167,1176816..1177067))
location: region:1171750-1177067:-1
so has part: feature:1176816-1177067:-1:exon
so has part: feature:1175976-1176167:-1:exon
so has part: feature:1175803-1175887:-1:exon
so has part: feature:1175594-1175683:-1:exon
so has part: feature:1175119-1175330:-1:exon
so has part: feature:1174869-1175040:-1:exon
so has part: feature:1174686-1174777:-1:exon
so has part: feature:1174296-1174392:-1:exon
so has part: feature:1173855-1173919:-1:exon
so has part: feature:1173554-1173676:-1:exon
so has part: feature:1173251-1173410:-1:exon
so has part: feature:1172944-1173050:-1:exon
so has part: feature:1172668-1172763:-1:exon
so has part: feature:1172340-1172525:-1:exon
so has part: feature:1172026-1172136:-1:exon
so has part: feature:1171750-1171894:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1176816-1177067:-1:exon

position:1176816:-1
position: 1176816
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1175976-1176167:-1:exon

position:1175976:-1
position: 1175976
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1176167:-1
position: 1176167
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1175803-1175887:-1:exon

position:1175803:-1
position: 1175803
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1175887:-1
position: 1175887
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1175594-1175683:-1:exon

position:1175594:-1
position: 1175594
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1175683:-1
position: 1175683
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1175119-1175330:-1:exon

position:1175119:-1
position: 1175119
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1175330:-1
position: 1175330
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1174869-1175040:-1:exon

position:1174869:-1
position: 1174869
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1175040:-1
position: 1175040
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1174686-1174777:-1:exon

position:1174686:-1
position: 1174686
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1174777:-1
position: 1174777
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1174296-1174392:-1:exon

position:1174296:-1
position: 1174296
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1174392:-1
position: 1174392
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:1173855-1173919:-1:exon

position:1173855:-1
position: 1173855
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1173919:-1
position: 1173919
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:1173554-1173676:-1:exon

position:1173554:-1
position: 1173554
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1173676:-1
position: 1173676
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:1173251-1173410:-1:exon

position:1173251:-1
position: 1173251
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1173410:-1
position: 1173410
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:1172944-1173050:-1:exon

position:1172944:-1
position: 1172944
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1173050:-1
position: 1173050
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:1172668-1172763:-1:exon

position:1172668:-1
position: 1172668
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1172763:-1
position: 1172763
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:1172340-1172525:-1:exon

position:1172340:-1
position: 1172340
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1172525:-1
position: 1172525
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:1172026-1172136:-1:exon

position:1172026:-1
position: 1172026
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1172136:-1
position: 1172136
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:1171750-1171894:-1:exon

position:1171894:-1
position: 1171894
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

UTP4
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8869
gene: UTP4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: U3 small nucleolar RNA-associated protein 4 homolog
translation: MGEFEVHRVRFFGLVPAGVRCLAYLPRGRRLALARTDGAVEVYGLGGSCFQEKAIPGHQARSVEALCWAAGERLFGAGLSGDITEYDLQRLRPARAVDGFGGPIWSMVANGGGTRLAIGCEDGSVKIFQVVPGGIQFEKNLDRQKGRVLCLSWHPLGTHIAAGSIDFIRVLDVRSGRTVQRIMVNYHVPKPKKRECVVWSIAFLSDGAVVSSDSFGRVQFWDWERGTLLESHTVSTSAVLSLAVSEKEDSIVVGTSTGATYQFQLLPVKAGGQEKRWVRTKPFQYHTHDVRAVAHSPTALISGGLDAQLVIRPLMEKVQRKGYEAVLRKFTFPHRRLVSCARKARLLLFQFSQHLELWRLGSTNETGKDGEVLPVCRMPEHLLQLKSKGPEHIYCSCVSPCGSWVAYCTASRFHLYRVQHEGDSVSVKKVPGVPKLLLPAYQLQCASDSGRLFVASDRGSVHVLQLLEPGGCKHLHTLRPPAGTAEAVYLLASSADGNWLAAVSGDWEIHVYSLKHFKHHCTVPTYSCAVTALAIHPATNNLVIAYADQQLFEFSIPEKQYTAWSRTVQNCGLHKAWLERDTPITHIAFNPQNPAHILLHDVYMFCVLDKSLPLPDASVPLLNQSALKQLPEPARQRQLHAFKICKKFQPLLFAELLEENRLVLVERPLADIRAQLPPPVQQQPFGT
SIO_010081: UTP4
subclass of: SO_0000673
so part of: UTP4
location: complement(join(1171778..1171894,1172026..1172136,1172340..1172525,1172668..1172763,1172944..1173050,1173251..1173410,1173554..1173676,1173855..1173919,1174296..1174392,1174686..1174777,1174869..1175040,1175119..1175330,1175594..1175683,1175803..1175887,1175976..1176167,1176816..1176974))
location: region:1171778-1176974:-1
so has part: feature:1176816-1176974:-1:exon
so has part: feature:1175976-1176167:-1:exon
so has part: feature:1175803-1175887:-1:exon
so has part: feature:1175594-1175683:-1:exon
so has part: feature:1175119-1175330:-1:exon
so has part: feature:1174869-1175040:-1:exon
so has part: feature:1174686-1174777:-1:exon
so has part: feature:1174296-1174392:-1:exon
so has part: feature:1173855-1173919:-1:exon
so has part: feature:1173554-1173676:-1:exon
so has part: feature:1173251-1173410:-1:exon
so has part: feature:1172944-1173050:-1:exon
so has part: feature:1172668-1172763:-1:exon
so has part: feature:1172340-1172525:-1:exon
so has part: feature:1172026-1172136:-1:exon
so has part: feature:1171778-1171894:-1:exon

XP_040427229.1
type: Protein
SIO_000068: ncbiprotein

position:1171778:-1
position: 1171778
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1176974:-1
position: 1176974
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1176816-1176974:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1175976-1176167:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1175803-1175887:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1175594-1175683:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1175119-1175330:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1174869-1175040:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1174686-1174777:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1174296-1174392:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1173855-1173919:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1173554-1173676:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1173251-1173410:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1172944-1173050:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1172668-1172763:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1172340-1172525:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1172026-1172136:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1171778-1171894:-1:exon

CHTF8
type: Gene
subclass of: SO_0000704
RO_0002162: 8869
gene: CHTF8
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1177074..1178797
location: region:1177074-1178797:1
so has part: feature:1177074-1178797:1:exon
subclass of: SO_0000010

121076729
type: Gene
SIO_000068: ncbigene

position:1177074:1
position: 1177074
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1178797:1
position: 1178797
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1177074-1178797:1:exon

CHTF8
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8869
gene: CHTF8
product: chromosome transmission fidelity factor 8, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 long SRA read, 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 11 samples with support for all annotated introns
transcript id: XM_040571299.1
SIO_010081: CHTF8
subclass of: SO_0000673
so part of: CHTF8
location: join(1177074..1177118,1177606..1177653,1177741..1177852,1177939..1178797)
location: region:1177074-1178797:1
so has part: feature:1177074-1177118:1:exon
so has part: feature:1177606-1177653:1:exon
so has part: feature:1177741-1177852:1:exon
so has part: feature:1177939-1178797:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1177074-1177118:1:exon

position:1177118:1
position: 1177118
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1177606-1177653:1:exon

position:1177606:1
position: 1177606
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1177653:1
position: 1177653
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1177741-1177852:1:exon

position:1177741:1
position: 1177741
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1177852:1
position: 1177852
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1177939-1178797:1:exon

position:1177939:1
position: 1177939
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

CHTF8
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8869
gene: CHTF8
product: chromosome transmission fidelity factor 8, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 long SRA read, 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 11 samples with support for all annotated introns
transcript id: XM_040571300.1
SIO_010081: CHTF8
subclass of: SO_0000673
so part of: CHTF8
location: join(1177075..1177118,1177624..1177653,1177741..1177852,1177939..1178797)
location: region:1177075-1178797:1
so has part: feature:1177075-1177118:1:exon
so has part: feature:1177624-1177653:1:exon
so has part: feature:1177741-1177852:1:exon
so has part: feature:1177939-1178797:1:exon

position:1177075:1
position: 1177075
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1177075-1177118:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1177624-1177653:1:exon

position:1177624:1
position: 1177624
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1177741-1177852:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1177939-1178797:1:exon

CHTF8
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8869
gene: CHTF8
product: chromosome transmission fidelity factor 8, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 long SRA read, 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XM_040571298.1
SIO_010081: CHTF8
subclass of: SO_0000673
so part of: CHTF8
location: join(1177095..1177116,1177582..1177653,1177741..1177852,1177939..1178797)
location: region:1177095-1178797:1
so has part: feature:1177095-1177116:1:exon
so has part: feature:1177582-1177653:1:exon
so has part: feature:1177741-1177852:1:exon
so has part: feature:1177939-1178797:1:exon

position:1177095:1
position: 1177095
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1177095-1177116:1:exon

position:1177116:1
position: 1177116
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1177582-1177653:1:exon

position:1177582:1
position: 1177582
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1177741-1177852:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1177939-1178797:1:exon

CHTF8
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8869
gene: CHTF8
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: chromosome transmission fidelity protein 8 homolog
translation: MVQLVVSSTGGLPRWVLLELQGEVEARSGGALPGSLLGDLHYTREGVPVLVVGHHVLYGKVVTLEKPFAVLVKEAAGPAQPHARYAVTALIKTKLLFKTRPKPIITNVPRKV
SIO_010081: CHTF8
subclass of: SO_0000673
so part of: CHTF8
location: join(1177631..1177653,1177741..1177852,1177939..1178142)
location: region:1177631-1178142:1
so has part: feature:1177631-1177653:1:exon
so has part: feature:1177741-1177852:1:exon
so has part: feature:1177939-1178142:1:exon

XP_040427232.1
type: Protein
SIO_000068: ncbiprotein

position:1177631:1
position: 1177631
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1178142:1
position: 1178142
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1177631-1177653:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1177741-1177852:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1177939-1178142:1:exon

CHTF8
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8869
gene: CHTF8
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: chromosome transmission fidelity protein 8 homolog
translation: MVQLVVSSTGGLPRWVLLELQGEVEARSGGALPGSLLGDLHYTREGVPVLVVGHHVLYGKVVTLEKPFAVLVKEAAGPAQPHARYAVTALIKTKLLFKTRPKPIITNVPRKV
SIO_010081: CHTF8
subclass of: SO_0000673
so part of: CHTF8
location: join(1177631..1177653,1177741..1177852,1177939..1178142)
location: region:1177631-1178142:1
so has part: feature:1177631-1177653:1:exon
so has part: feature:1177741-1177852:1:exon
so has part: feature:1177939-1178142:1:exon

XP_040427233.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1177631-1177653:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1177741-1177852:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1177939-1178142:1:exon

CHTF8
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8869
gene: CHTF8
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: chromosome transmission fidelity protein 8 homolog
translation: MVQLVVSSTGGLPRWVLLELQGEVEARSGGALPGSLLGDLHYTREGVPVLVVGHHVLYGKVVTLEKPFAVLVKEAAGPAQPHARYAVTALIKTKLLFKTRPKPIITNVPRKV
SIO_010081: CHTF8
subclass of: SO_0000673
so part of: CHTF8
location: join(1177631..1177653,1177741..1177852,1177939..1178142)
location: region:1177631-1178142:1
so has part: feature:1177631-1177653:1:exon
so has part: feature:1177741-1177852:1:exon
so has part: feature:1177939-1178142:1:exon

XP_040427234.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1177631-1177653:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1177741-1177852:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1177939-1178142:1:exon

HAS3
type: Gene
subclass of: SO_0000704
RO_0002162: 8869
gene: HAS3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1178929..1182968)
location: region:1178929-1182968:-1
so has part: feature:1178929-1182968:-1:exon
subclass of: SO_0000010

121076728
type: Gene
SIO_000068: ncbigene

position:1178929:-1
position: 1178929
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1182968:-1
position: 1182968
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1178929-1182968:-1:exon

HAS3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8869
gene: HAS3
product: hyaluronan synthase 3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 19 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_040571296.1
SIO_010081: HAS3
subclass of: SO_0000673
so part of: HAS3
location: complement(join(1178929..1181008,1181115..1181216,1181658..1182278,1182927..1182968))
location: region:1178929-1182968:-1
so has part: feature:1182927-1182968:-1:exon
so has part: feature:1181658-1182278:-1:exon
so has part: feature:1181115-1181216:-1:exon
so has part: feature:1178929-1181008:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1182927-1182968:-1:exon

position:1182927:-1
position: 1182927
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1181658-1182278:-1:exon

position:1181658:-1
position: 1181658
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1182278:-1
position: 1182278
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1181115-1181216:-1:exon

position:1181115:-1
position: 1181115
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1181216:-1
position: 1181216
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1178929-1181008:-1:exon

position:1181008:-1
position: 1181008
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

HAS3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8869
gene: HAS3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: hyaluronan synthase 3
translation: MPVSLSTALRVVGTSLFALAVLGGILAAYVTGYQFIHTEKHYLSFGLYGAILGLHLFIQSLFAFLEHRRMRGEGRPVRLGRSVALCIAAYQEDPDYLKKCLRSVKRIAFPDLKVVMVVDGNGPDDTYMLDIFHDVMGSERAGSYVWRSNFHTWGEGETEAGLREGLARVQALVRGTTYSCILQKWGGKREVMYTAFRALGDSVDYIQVCDSDTVLDPACTAEMLRILEADPRVGGVGGDVQILNKYDSWISFLSSVRYWMAFNVERACQSYFGCVQCISGPLGMYRNALLQQFLEDWYHQTFLGSKCSFGDDRHLTNRVLSLGYQTKYTARSKCLTETPTRYLRWLNQQTRWSKSYFREWLYNALWFHKHHLWMTYESVVTGFFPFFLIATVIQLFYRGRIWNILLFLLTVQLVGIIKATYACFLRGSAEMIFMSLYALLYMSSLLPAKMFAIATINKSGWGTSGRRTVVVNFVGLLPVSVWVAVLLGGLAYTAYSQDLLSETEVAFLVSGAILYACYWVALLTLYLAIVARRCGKRQEQCGLAFAEV
SIO_010081: HAS3
subclass of: SO_0000673
so part of: HAS3
location: complement(join(1180085..1181008,1181115..1181216,1181658..1182278))
location: region:1180085-1182278:-1
so has part: feature:1181658-1182278:-1:exon
so has part: feature:1181115-1181216:-1:exon
so has part: feature:1180085-1181008:-1:exon

XP_040427230.1
type: Protein
SIO_000068: ncbiprotein

position:1180085:-1
position: 1180085
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1181658-1182278:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1181115-1181216:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1180085-1181008:-1:exon

TANGO6
type: Gene
subclass of: SO_0000704
RO_0002162: 8869
gene: TANGO6
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1185291..1216974)
location: region:1185291-1216974:-1
so has part: feature:1185291-1216974:-1:exon
subclass of: SO_0000010

121076903
type: Gene
SIO_000068: ncbigene

position:1185291:-1
position: 1185291
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1216974:-1
position: 1216974
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1185291-1216974:-1:exon

TANGO6
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8869
gene: TANGO6
product: transport and golgi organization 6 homolog
exception: unclassified transcription discrepancy
note: The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: deleted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 20 long SRA reads, 1 Protein, and 91% coverage of the annotated genomic feature by RNAseq alignments, including 12 samples with support for all annotated introns
transcript id: XM_040571546.1
SIO_010081: TANGO6
subclass of: SO_0000673
so part of: TANGO6
location: complement(join(1185291..1185697,1188514..1188627,1190857..1191008,1195382..1195534,1198645..1198702,1198841..1199368,1201976..1202110,1205129..1205308,1205610..1205736,1207367..1207543,1208803..1208915,1212190..1212272,1212832..1212994,1213497..1213621,1214393..1214543,1215563..1215679,1216005..1216974))
location: region:1185291-1216974:-1
so has part: feature:1216005-1216974:-1:exon
so has part: feature:1215563-1215679:-1:exon
so has part: feature:1214393-1214543:-1:exon
so has part: feature:1213497-1213621:-1:exon
so has part: feature:1212832-1212994:-1:exon
so has part: feature:1212190-1212272:-1:exon
so has part: feature:1208803-1208915:-1:exon
so has part: feature:1207367-1207543:-1:exon
so has part: feature:1205610-1205736:-1:exon
so has part: feature:1205129-1205308:-1:exon
so has part: feature:1201976-1202110:-1:exon
so has part: feature:1198841-1199368:-1:exon
so has part: feature:1198645-1198702:-1:exon
so has part: feature:1195382-1195534:-1:exon
so has part: feature:1190857-1191008:-1:exon
so has part: feature:1188514-1188627:-1:exon
so has part: feature:1185291-1185697:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1216005-1216974:-1:exon

position:1216005:-1
position: 1216005
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1215563-1215679:-1:exon

position:1215563:-1
position: 1215563
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1215679:-1
position: 1215679
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1214393-1214543:-1:exon

position:1214393:-1
position: 1214393
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1214543:-1
position: 1214543
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1213497-1213621:-1:exon

position:1213497:-1
position: 1213497
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1213621:-1
position: 1213621
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1212832-1212994:-1:exon

position:1212832:-1
position: 1212832
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1212994:-1
position: 1212994
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1212190-1212272:-1:exon

position:1212190:-1
position: 1212190
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1212272:-1
position: 1212272
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1208803-1208915:-1:exon

position:1208803:-1
position: 1208803
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1208915:-1
position: 1208915
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1207367-1207543:-1:exon

position:1207367:-1
position: 1207367
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1207543:-1
position: 1207543
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:1205610-1205736:-1:exon

position:1205610:-1
position: 1205610
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1205736:-1
position: 1205736
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:1205129-1205308:-1:exon

position:1205129:-1
position: 1205129
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1205308:-1
position: 1205308
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:1201976-1202110:-1:exon

position:1201976:-1
position: 1201976
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1202110:-1
position: 1202110
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:1198841-1199368:-1:exon

position:1198841:-1
position: 1198841
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1199368:-1
position: 1199368
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:1198645-1198702:-1:exon

position:1198645:-1
position: 1198645
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1198702:-1
position: 1198702
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:1195382-1195534:-1:exon

position:1195382:-1
position: 1195382
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1195534:-1
position: 1195534
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:1190857-1191008:-1:exon

position:1190857:-1
position: 1190857
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1191008:-1
position: 1191008
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:1188514-1188627:-1:exon

position:1188514:-1
position: 1188514
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1188627:-1
position: 1188627
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:1185291-1185697:-1:exon

position:1185697:-1
position: 1185697
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

TANGO6
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8869
gene: TANGO6
exception: unclassified translation discrepancy
note: The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: deleted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: LOW QUALITY PROTEIN: transport and Golgi organization protein 6 homolog
translation: MWRHRGVRFPQPPAPPRRPVLPAPHGSHTEPRQRPTGPGPPWRPDLPRIAAGGSALPPRSPQDGGGRPRPSPSPDLPKMAAEAAGPSPPRHGGPKMAGGGEPDPGQVVEALELLLRQPAGPGERGGAAGTGPEGALRLETVLSNATALDERLRGEPGWAALRGLRSAVLARAPALAAGAEGEGEPGWAAACAVLALLLCLKERLLALAALPAAPAAVPGAPPPPAADTLSAAQGRAVRRALRAAVGLGLTPYLPPGVGQRPGPPLPPPLPPGVTRGARLRAATGALVELCRHPALGGPLLAHHLGILLAGLCLLGHGPAADNEGLSELERAQSREALQHILDRVYQPLAVRELLILQGGPKQSHPSPGEETKPALVRAPAWLRRLCGQLLSERLMRPSGVQAVVRGIMEGTGGGTDAEAAAVDWRKCDAVAKILASCPQQCLSLEDYYRRVCPQILGLLHIQDKLTARQFQRVATTTLLTMAKEHPQLAEKYLLQPLLAPLLRCSDAAEIAAEDLSAGTVLVTEAELSSCVEDVFKVYVVGNDSSSLLLGSLQSVLGVVFCLYSFAKQNVSYLRSPCEEVLLWFLEKSERETSLSVLESCAGLEGSVRRLHPRCCFRVGSEGGAVVVVEEPISDEDEALYQKVSLEQCYVESLVELLSHCQKSGLAGDFFIRCLKALTHVAAEDEAEVSPSAAAGGSLLELEQHHARQRRKLLVLQLVATLCESVSDTVFTDIAQVEEFVAATLQRACVSLARGRGTAVEAQTLSMAMGLVAAALGGAVQLKSSDFAVLKRLLPLLEEVSRTHPDPVIQELAADLRIAICTHGAFSAQTVGTAAETVLGKKLGPSRTGGGSPAGPPVTAPCQSPGAGGAPTQRGRGCSRPSAPKEGEEQSMHEEPGAVGPAATPSTESPAPAQLQELLLSAYDPQVPVRAAAVRALSSLISQRDPEALQMQEKILQVFLENVQHEDSFVYLSAIQGVALLSSEYPEQVLPTLLARYGSPTQGTEDTPAAVSRMKLGEVLMRVTRALGDMVVKYREPLIHAFLRGSRDPDSVLRASSLSNLGELCQRLGFQLGSVVQEVTSCVTAIAKTDPEAEVRRAAVHVVVLLLRGLSEKATEVLRDVLRDLYRLLKHVVAAEPDGAAVLHAQLALEELGQAVRGGLFPPQVLEKKIVVLP
SIO_010081: TANGO6
subclass of: SO_0000673
so part of: TANGO6
location: complement(join(1185521..1185697,1188514..1188627,1190857..1191008,1195382..1195534,1198645..1198702,1198841..1199368,1201976..1202110,1205129..1205308,1205610..1205736,1207367..1207543,1208803..1208915,1212190..1212272,1212832..1212994,1213497..1213621,1214393..1214543,1215563..1215679,1216005..1216974))
location: region:1185521-1216974:-1
so has part: feature:1216005-1216974:-1:exon
so has part: feature:1215563-1215679:-1:exon
so has part: feature:1214393-1214543:-1:exon
so has part: feature:1213497-1213621:-1:exon
so has part: feature:1212832-1212994:-1:exon
so has part: feature:1212190-1212272:-1:exon
so has part: feature:1208803-1208915:-1:exon
so has part: feature:1207367-1207543:-1:exon
so has part: feature:1205610-1205736:-1:exon
so has part: feature:1205129-1205308:-1:exon
so has part: feature:1201976-1202110:-1:exon
so has part: feature:1198841-1199368:-1:exon
so has part: feature:1198645-1198702:-1:exon
so has part: feature:1195382-1195534:-1:exon
so has part: feature:1190857-1191008:-1:exon
so has part: feature:1188514-1188627:-1:exon
so has part: feature:1185521-1185697:-1:exon

XP_040427480.1
type: Protein
SIO_000068: ncbiprotein

position:1185521:-1
position: 1185521
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1216005-1216974:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1215563-1215679:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1214393-1214543:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1213497-1213621:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1212832-1212994:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1212190-1212272:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1208803-1208915:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1207367-1207543:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1205610-1205736:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1205129-1205308:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1201976-1202110:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1198841-1199368:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1198645-1198702:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1195382-1195534:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1190857-1191008:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1188514-1188627:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1185521-1185697:-1:exon

CDH1
type: Gene
subclass of: SO_0000704
RO_0002162: 8869
gene: CDH1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1217858..1227140)
location: region:1217858-1227140:-1
so has part: feature:1217858-1227140:-1:exon
subclass of: SO_0000010

121076557
type: Gene
SIO_000068: ncbigene

position:1217858:-1
position: 1217858
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1227140:-1
position: 1227140
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1217858-1227140:-1:exon

CDH1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8869
gene: CDH1
product: cadherin 1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 long SRA reads, 24 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_040570970.1
SIO_010081: CDH1
subclass of: SO_0000673
so part of: CDH1
location: complement(join(1217858..1219006,1219209..1219352,1219612..1219742,1219819..1220040,1220285..1220509,1220617..1220759,1220866..1221110,1221199..1221384,1221481..1221609,1221710..1221885,1222006..1222150,1222225..1222380,1222506..1222637,1222753..1222979,1226778..1226892,1226973..1227140))
location: region:1217858-1227140:-1
so has part: feature:1226973-1227140:-1:exon
so has part: feature:1226778-1226892:-1:exon
so has part: feature:1222753-1222979:-1:exon
so has part: feature:1222506-1222637:-1:exon
so has part: feature:1222225-1222380:-1:exon
so has part: feature:1222006-1222150:-1:exon
so has part: feature:1221710-1221885:-1:exon
so has part: feature:1221481-1221609:-1:exon
so has part: feature:1221199-1221384:-1:exon
so has part: feature:1220866-1221110:-1:exon
so has part: feature:1220617-1220759:-1:exon
so has part: feature:1220285-1220509:-1:exon
so has part: feature:1219819-1220040:-1:exon
so has part: feature:1219612-1219742:-1:exon
so has part: feature:1219209-1219352:-1:exon
so has part: feature:1217858-1219006:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1226973-1227140:-1:exon

position:1226973:-1
position: 1226973
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1226778-1226892:-1:exon

position:1226778:-1
position: 1226778
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1226892:-1
position: 1226892
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1222753-1222979:-1:exon

position:1222753:-1
position: 1222753
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1222979:-1
position: 1222979
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1222506-1222637:-1:exon

position:1222506:-1
position: 1222506
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1222637:-1
position: 1222637
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1222225-1222380:-1:exon

position:1222225:-1
position: 1222225
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1222380:-1
position: 1222380
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1222006-1222150:-1:exon

position:1222006:-1
position: 1222006
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1222150:-1
position: 1222150
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1221710-1221885:-1:exon

position:1221710:-1
position: 1221710
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1221885:-1
position: 1221885
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1221481-1221609:-1:exon

position:1221481:-1
position: 1221481
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1221609:-1
position: 1221609
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:1221199-1221384:-1:exon

position:1221199:-1
position: 1221199
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1221384:-1
position: 1221384
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:1220866-1221110:-1:exon

position:1220866:-1
position: 1220866
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1221110:-1
position: 1221110
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:1220617-1220759:-1:exon

position:1220617:-1
position: 1220617
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1220759:-1
position: 1220759
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:1220285-1220509:-1:exon

position:1220285:-1
position: 1220285
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1220509:-1
position: 1220509
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:1219819-1220040:-1:exon

position:1219819:-1
position: 1219819
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1220040:-1
position: 1220040
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:1219612-1219742:-1:exon

position:1219612:-1
position: 1219612
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1219742:-1
position: 1219742
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:1219209-1219352:-1:exon

position:1219209:-1
position: 1219209
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1219352:-1
position: 1219352
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:1217858-1219006:-1:exon

position:1219006:-1
position: 1219006
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

CDH1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8869
gene: CDH1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: cadherin-1
translation: MGRQRSSLAPLCFPLLLLLQVGGRRCDEAAPCQPGFAAETFTFTVPRDSVAAGGVLGRVRFSGCGGRSQAVYVPDDTRFEVDEDGIIQTKQPLQLRGQKIHFSVSALDATGKRHSAWVTVEKRRWRQHHRHTYQDGVPYMLTFPESGPGLRRQKRDWVIPPISCLENHRGPFPMKLVQIKSNKDKETKVFYSITGQGADSPPVGVFTIERETGWLEVTQPLDREEIGKYVLFSHAVSANGQPVEDPMEIIITVTDQNDNKPVFTKQVFVGYIEENAKPGTSVMTVNATDADDAVNVDNGIISYSIVSQEPPRPHHQMFTIDPQKGVISVLGTGLDRETTPNYTLIVQATDQEGKGLSTTATAVIEVTDANDNIPVFDPNMYEGTVDENEVGLEVARLHVTDQDMPGSPAWQAVYRIKSGDQDGAFSITTDPNTNDGILRTAKGLDYETRSRYDLVVTVENKVPLSVSLGLSSASVLVLVRDVNEPPVFVPPVKRVEVSEDLPVGHEVTSYTAQDPDKDQRNKITYRMGSDPAGWLAIHPENGIVTAVQPLDRESVHAINSTYKAIVLAVDNGVPDATGTGTLLLHLQDVNDNGPTPEPRIFDICSRQPEEQTLTIVDKDLPPNTYPFEAALEHGSSTNWTVKVSGQDSLVLKLHKELEPGEYSIFLRLTDSQGKAQVTQVKAQVCECEGAAKNCERRAFIASGLGVPAILGILGGILALLILLLLLLLFVRRRKVVKEPLLPPEDDMRDNVYHYDEEGGGEEDQDYDLSQLHRGLDARPEVIRNDVAPPLMAAPQYRPRPANPDEIGNFIDENLKAADTDPTAPPYDSLLVFDYEGSGSEAVSLSSLNSSDSDQDQDYDYLNEWGNRFKKLAELYGGGEDDD
SIO_010081: CDH1
subclass of: SO_0000673
so part of: CDH1
location: complement(join(1218794..1219006,1219209..1219352,1219612..1219742,1219819..1220040,1220285..1220509,1220617..1220759,1220866..1221110,1221199..1221384,1221481..1221609,1221710..1221885,1222006..1222150,1222225..1222380,1222506..1222637,1222753..1222979,1226778..1226892,1226973..1227032))
location: region:1218794-1227032:-1
so has part: feature:1226973-1227032:-1:exon
so has part: feature:1226778-1226892:-1:exon
so has part: feature:1222753-1222979:-1:exon
so has part: feature:1222506-1222637:-1:exon
so has part: feature:1222225-1222380:-1:exon
so has part: feature:1222006-1222150:-1:exon
so has part: feature:1221710-1221885:-1:exon
so has part: feature:1221481-1221609:-1:exon
so has part: feature:1221199-1221384:-1:exon
so has part: feature:1220866-1221110:-1:exon
so has part: feature:1220617-1220759:-1:exon
so has part: feature:1220285-1220509:-1:exon
so has part: feature:1219819-1220040:-1:exon
so has part: feature:1219612-1219742:-1:exon
so has part: feature:1219209-1219352:-1:exon
so has part: feature:1218794-1219006:-1:exon

XP_040426904.1
type: Protein
SIO_000068: ncbiprotein

position:1218794:-1
position: 1218794
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1227032:-1
position: 1227032
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1226973-1227032:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1226778-1226892:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1222753-1222979:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1222506-1222637:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1222225-1222380:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1222006-1222150:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1221710-1221885:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1221481-1221609:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1221199-1221384:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1220866-1221110:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1220617-1220759:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1220285-1220509:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1219819-1220040:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1219612-1219742:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1219209-1219352:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1218794-1219006:-1:exon

CDH3
type: Gene
subclass of: SO_0000704
RO_0002162: 8869
gene: CDH3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1227900..1233814)
location: region:1227900-1233814:-1
so has part: feature:1227900-1233814:-1:exon
subclass of: SO_0000010

121076558
type: Gene
SIO_000068: ncbigene

position:1227900:-1
position: 1227900
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1233814:-1
position: 1233814
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1227900-1233814:-1:exon

CDH3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8869
gene: CDH3
product: cadherin 3, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 long SRA reads, 21 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XM_040570973.1
SIO_010081: CDH3
subclass of: SO_0000673
so part of: CDH3
location: complement(join(1227900..1228350,1228424..1228567,1228638..1228768,1228846..1229064,1229150..1229374,1229578..1229720,1229796..1230040,1230117..1230302,1230375..1230503,1230590..1230765,1230917..1231061,1231136..1231291,1231520..1231630,1231726..1231868,1233615..1233814))
location: region:1227900-1233814:-1
so has part: feature:1233615-1233814:-1:exon
so has part: feature:1231726-1231868:-1:exon
so has part: feature:1231520-1231630:-1:exon
so has part: feature:1231136-1231291:-1:exon
so has part: feature:1230917-1231061:-1:exon
so has part: feature:1230590-1230765:-1:exon
so has part: feature:1230375-1230503:-1:exon
so has part: feature:1230117-1230302:-1:exon
so has part: feature:1229796-1230040:-1:exon
so has part: feature:1229578-1229720:-1:exon
so has part: feature:1229150-1229374:-1:exon
so has part: feature:1228846-1229064:-1:exon
so has part: feature:1228638-1228768:-1:exon
so has part: feature:1228424-1228567:-1:exon
so has part: feature:1227900-1228350:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1233615-1233814:-1:exon

position:1233615:-1
position: 1233615
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1231726-1231868:-1:exon

position:1231726:-1
position: 1231726
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1231868:-1
position: 1231868
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1231520-1231630:-1:exon

position:1231520:-1
position: 1231520
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1231630:-1
position: 1231630
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1231136-1231291:-1:exon

position:1231136:-1
position: 1231136
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1231291:-1
position: 1231291
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1230917-1231061:-1:exon

position:1230917:-1
position: 1230917
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1231061:-1
position: 1231061
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1230590-1230765:-1:exon

position:1230590:-1
position: 1230590
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1230765:-1
position: 1230765
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1230375-1230503:-1:exon

position:1230375:-1
position: 1230375
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1230503:-1
position: 1230503
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1230117-1230302:-1:exon

position:1230117:-1
position: 1230117
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1230302:-1
position: 1230302
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:1229796-1230040:-1:exon

position:1229796:-1
position: 1229796
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1230040:-1
position: 1230040
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:1229578-1229720:-1:exon

position:1229578:-1
position: 1229578
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1229720:-1
position: 1229720
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:1229150-1229374:-1:exon

position:1229150:-1
position: 1229150
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1229374:-1
position: 1229374
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:1228846-1229064:-1:exon

position:1228846:-1
position: 1228846
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1229064:-1
position: 1229064
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:1228638-1228768:-1:exon

position:1228638:-1
position: 1228638
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1228768:-1
position: 1228768
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:1228424-1228567:-1:exon

position:1228424:-1
position: 1228424
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1228567:-1
position: 1228567
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:1227900-1228350:-1:exon

position:1228350:-1
position: 1228350
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

CDH3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8869
gene: CDH3
product: cadherin 3, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 12 long SRA reads, 21 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
transcript id: XM_040570972.1
SIO_010081: CDH3
subclass of: SO_0000673
so part of: CDH3
location: complement(join(1227900..1228350,1228424..1228567,1228638..1228768,1228846..1229064,1229150..1229374,1229578..1229720,1229796..1230040,1230117..1230302,1230375..1230503,1230590..1230765,1230917..1231061,1231136..1231291,1231520..1231630,1231726..1231871,1233615..1233814))
location: region:1227900-1233814:-1
so has part: feature:1233615-1233814:-1:exon
so has part: feature:1231726-1231871:-1:exon
so has part: feature:1231520-1231630:-1:exon
so has part: feature:1231136-1231291:-1:exon
so has part: feature:1230917-1231061:-1:exon
so has part: feature:1230590-1230765:-1:exon
so has part: feature:1230375-1230503:-1:exon
so has part: feature:1230117-1230302:-1:exon
so has part: feature:1229796-1230040:-1:exon
so has part: feature:1229578-1229720:-1:exon
so has part: feature:1229150-1229374:-1:exon
so has part: feature:1228846-1229064:-1:exon
so has part: feature:1228638-1228768:-1:exon
so has part: feature:1228424-1228567:-1:exon
so has part: feature:1227900-1228350:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1233615-1233814:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1231726-1231871:-1:exon

position:1231871:-1
position: 1231871
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1231520-1231630:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1231136-1231291:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1230917-1231061:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1230590-1230765:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1230375-1230503:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1230117-1230302:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1229796-1230040:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1229578-1229720:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1229150-1229374:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1228846-1229064:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1228638-1228768:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1228424-1228567:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1227900-1228350:-1:exon

CDH3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8869
gene: CDH3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: cadherin-3 isoform X2
translation: MRGSRSGLCPLLLLLLLPAAAAPARPCAPPGPAFGDGTMQHEDEEPHAGVVAPRHPGWLPVTPQDATSQPVPVRRRRSLQEVPDVPGALRRQKRDWVIPPIKVPENERGPFPKKLVQIKSNRDREAKIFYSITGQGADTPPEGIFTIEKETGWMKVTQPLDREHMDKYHLFSHAVSENGKPVEEPMEIIVTVTDQNDNKPQFTQEVFRGSVPEGALPGTSVMQVNATDADDAVETYNGVLAYSILSQEPREPHPHMFTVNRATGTLSVIASGLDRERVREYTLTVQAADLDGEGLTTTALAVIEITDVNDNAPEFDPKTYEVAVPENEAGLEVARLLTMDLDEPQTPAWRAVYSIVRGNEGSAFTITTDPASNEGVLRTAKALDYEAKRQFVLHVAVANEAPFAVKLPTATATVTVSVEDVNEAPAFDPPVRLAQVAEDAPLGQPLASYTAQDPDRAQRQRIKYVVGSDPAGWLAVHPENGLITARDHLDRESPFAKNSTYMAVLLAVDDGSPPATGTGTLLLTLLDVNDHGPEPEPRNIVVCNRSPVPQVLTVIDRDLPPNTGPFRAELSHGSGDSWAVEVGDTGDTVTLRLTEPLEQEEYSVYLRLFDRQGKDQVTVIKAQVCDCQGRVESCAYEPQTATGVPIILAVLGAFLAFLIILLLLLLFVRRRKVVKEPLLLPEDDTRDNVFYYGEEGGGEEDQDYDLSQLHRGLDARPEVIRNDVAPPLMAAPQYRPRPANPEDIGTFIDENLKAADTDPTAPPYDSLLVFDYEGSGSEAVSLSSLNSSDSDQDQDYDYLNEWGNRFKKLAELYGGGEDDE
SIO_010081: CDH3
subclass of: SO_0000673
so part of: CDH3
location: complement(join(1228138..1228350,1228424..1228567,1228638..1228768,1228846..1229064,1229150..1229374,1229578..1229720,1229796..1230040,1230117..1230302,1230375..1230503,1230590..1230765,1230917..1231061,1231136..1231291,1231520..1231630,1231726..1231868,1233615..1233711))
location: region:1228138-1233711:-1
so has part: feature:1233615-1233711:-1:exon
so has part: feature:1231726-1231868:-1:exon
so has part: feature:1231520-1231630:-1:exon
so has part: feature:1231136-1231291:-1:exon
so has part: feature:1230917-1231061:-1:exon
so has part: feature:1230590-1230765:-1:exon
so has part: feature:1230375-1230503:-1:exon
so has part: feature:1230117-1230302:-1:exon
so has part: feature:1229796-1230040:-1:exon
so has part: feature:1229578-1229720:-1:exon
so has part: feature:1229150-1229374:-1:exon
so has part: feature:1228846-1229064:-1:exon
so has part: feature:1228638-1228768:-1:exon
so has part: feature:1228424-1228567:-1:exon
so has part: feature:1228138-1228350:-1:exon

XP_040426907.1
type: Protein
SIO_000068: ncbiprotein

position:1228138:-1
position: 1228138
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1233711:-1
position: 1233711
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1233615-1233711:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1231726-1231868:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1231520-1231630:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1231136-1231291:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1230917-1231061:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1230590-1230765:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1230375-1230503:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1230117-1230302:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1229796-1230040:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1229578-1229720:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1229150-1229374:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1228846-1229064:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1228638-1228768:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1228424-1228567:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1228138-1228350:-1:exon

CDH3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8869
gene: CDH3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: cadherin-3 isoform X1
translation: MRGSRSGLCPLLLLLLLPAAAAPARPCAPPGPAAFGDGTMQHEDEEPHAGVVAPRHPGWLPVTPQDATSQPVPVRRRRSLQEVPDVPGALRRQKRDWVIPPIKVPENERGPFPKKLVQIKSNRDREAKIFYSITGQGADTPPEGIFTIEKETGWMKVTQPLDREHMDKYHLFSHAVSENGKPVEEPMEIIVTVTDQNDNKPQFTQEVFRGSVPEGALPGTSVMQVNATDADDAVETYNGVLAYSILSQEPREPHPHMFTVNRATGTLSVIASGLDRERVREYTLTVQAADLDGEGLTTTALAVIEITDVNDNAPEFDPKTYEVAVPENEAGLEVARLLTMDLDEPQTPAWRAVYSIVRGNEGSAFTITTDPASNEGVLRTAKALDYEAKRQFVLHVAVANEAPFAVKLPTATATVTVSVEDVNEAPAFDPPVRLAQVAEDAPLGQPLASYTAQDPDRAQRQRIKYVVGSDPAGWLAVHPENGLITARDHLDRESPFAKNSTYMAVLLAVDDGSPPATGTGTLLLTLLDVNDHGPEPEPRNIVVCNRSPVPQVLTVIDRDLPPNTGPFRAELSHGSGDSWAVEVGDTGDTVTLRLTEPLEQEEYSVYLRLFDRQGKDQVTVIKAQVCDCQGRVESCAYEPQTATGVPIILAVLGAFLAFLIILLLLLLFVRRRKVVKEPLLLPEDDTRDNVFYYGEEGGGEEDQDYDLSQLHRGLDARPEVIRNDVAPPLMAAPQYRPRPANPEDIGTFIDENLKAADTDPTAPPYDSLLVFDYEGSGSEAVSLSSLNSSDSDQDQDYDYLNEWGNRFKKLAELYGGGEDDE
SIO_010081: CDH3
subclass of: SO_0000673
so part of: CDH3
location: complement(join(1228138..1228350,1228424..1228567,1228638..1228768,1228846..1229064,1229150..1229374,1229578..1229720,1229796..1230040,1230117..1230302,1230375..1230503,1230590..1230765,1230917..1231061,1231136..1231291,1231520..1231630,1231726..1231871,1233615..1233711))
location: region:1228138-1233711:-1
so has part: feature:1233615-1233711:-1:exon
so has part: feature:1231726-1231871:-1:exon
so has part: feature:1231520-1231630:-1:exon
so has part: feature:1231136-1231291:-1:exon
so has part: feature:1230917-1231061:-1:exon
so has part: feature:1230590-1230765:-1:exon
so has part: feature:1230375-1230503:-1:exon
so has part: feature:1230117-1230302:-1:exon
so has part: feature:1229796-1230040:-1:exon
so has part: feature:1229578-1229720:-1:exon
so has part: feature:1229150-1229374:-1:exon
so has part: feature:1228846-1229064:-1:exon
so has part: feature:1228638-1228768:-1:exon
so has part: feature:1228424-1228567:-1:exon
so has part: feature:1228138-1228350:-1:exon

XP_040426906.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1233615-1233711:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1231726-1231871:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1231520-1231630:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1231136-1231291:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1230917-1231061:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1230590-1230765:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1230375-1230503:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1230117-1230302:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1229796-1230040:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1229578-1229720:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1229150-1229374:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1228846-1229064:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1228638-1228768:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1228424-1228567:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1228138-1228350:-1:exon

LOC121076559
type: Gene
subclass of: SO_0000704
RO_0002162: 8869
gene: LOC121076559
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1233963..1239906
location: region:1233963-1239906:1
so has part: feature:1233963-1239906:1:exon
subclass of: SO_0000010

121076559
type: Gene
SIO_000068: ncbigene

position:1233963:1
position: 1233963
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1239906:1
position: 1239906
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1233963-1239906:1:exon

LOC121076559
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8869
gene: LOC121076559
product: cadherin-1-like
exception: unclassified transcription discrepancy
note: The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: deleted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 long SRA reads, 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_040570974.1
SIO_010081: LOC121076559
subclass of: SO_0000673
so part of: LOC121076559
location: join(1233963..1234153,1234354..1234458,1234573..1234716,1234842..1234997,1235072..1235216,1235337..1235512,1235613..1235741,1235838..1236356,1236463..1236605,1236713..1236937,1237182..1237405,1239099..1239238,1239380..1239515,1239734..1239906)
location: region:1233963-1239906:1
so has part: feature:1233963-1234153:1:exon
so has part: feature:1234354-1234458:1:exon
so has part: feature:1234573-1234716:1:exon
so has part: feature:1234842-1234997:1:exon
so has part: feature:1235072-1235216:1:exon
so has part: feature:1235337-1235512:1:exon
so has part: feature:1235613-1235741:1:exon
so has part: feature:1235838-1236356:1:exon
so has part: feature:1236463-1236605:1:exon
so has part: feature:1236713-1236937:1:exon
so has part: feature:1237182-1237405:1:exon
so has part: feature:1239099-1239238:1:exon
so has part: feature:1239380-1239515:1:exon
so has part: feature:1239734-1239906:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1233963-1234153:1:exon

position:1234153:1
position: 1234153
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1234354-1234458:1:exon

position:1234354:1
position: 1234354
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1234458:1
position: 1234458
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1234573-1234716:1:exon

position:1234573:1
position: 1234573
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1234716:1
position: 1234716
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1234842-1234997:1:exon

position:1234842:1
position: 1234842
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1234997:1
position: 1234997
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1235072-1235216:1:exon

position:1235072:1
position: 1235072
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1235216:1
position: 1235216
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1235337-1235512:1:exon

position:1235337:1
position: 1235337
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1235512:1
position: 1235512
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1235613-1235741:1:exon

position:1235613:1
position: 1235613
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1235741:1
position: 1235741
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1235838-1236356:1:exon

position:1235838:1
position: 1235838
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1236356:1
position: 1236356
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:1236463-1236605:1:exon

position:1236463:1
position: 1236463
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1236605:1
position: 1236605
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:1236713-1236937:1:exon

position:1236713:1
position: 1236713
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1236937:1
position: 1236937
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:1237182-1237405:1:exon

position:1237182:1
position: 1237182
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1237405:1
position: 1237405
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:1239099-1239238:1:exon

position:1239099:1
position: 1239099
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1239238:1
position: 1239238
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:1239380-1239515:1:exon

position:1239380:1
position: 1239380
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1239515:1
position: 1239515
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:1239734-1239906:1:exon

position:1239734:1
position: 1239734
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC121076559
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8869
gene: LOC121076559
exception: unclassified translation discrepancy
note: The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: deleted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: LOW QUALITY PROTEIN: cadherin-1-like
translation: MSPCALLLLLLLQDAVLSTQADVVAFPESGPGLRRQKRDWVIPPISCLENHRGPFPMKLVQIKSNKDKETKVFYSITGQGVDSPPVGVFTIERETGWLEVTQPLDREEIGKYVLFSHAVSANGQPVEDPMEIIITVTDQNDNKPVFTKQVFVGYIEENAKPGTSVMTVNATDADDAVNVDNGIISYSIVSQEPPRPHHQMFTIDPQKGVISVLGTGLDRETTPNYTLIVQATDQEGRGLSTTATAVIEVTDANDNIPVFDPNTYEGTVDENEVGLEVARLHVTDQDMPGSPAWQAVYRIKSGDQDGAFSITTDPNTNDGILRTAKVGRGAAGLPRAGRVPAGAGSSPALLADLQGLDYETRSRYDLVVTVENKVPLSVSLGLSSASVLVLVRDVNEPPVFVPPVKRVEVSEDLPVGHEVTSYTAQDPDKDQRNKITYRMGSDPAGWLAIHPENGIVTAVQPLDRESVHAINSTYKAIVLAVDNGVPDATGTGTLLLHLQDVNDNGPTPEPRIFDICSRQPEEQTLTIVDKDLPPNTYPFEAALEHGSSTNWTVKVSGQDSLVLKLHKELEPGEYSIFLRLTDSQGKAQVTQVKARVCECEGAAENCQQRAFTATAIVKIRDAIDNAPVFSFTMVGGTERPRGSLTTHVLNTATGLPAARLALRLAQLQEPGAQWRELVQRWTDEDGRCLPLLPPGQAKAGTYKLRFETGEYWQSLGHTSFYPFVEVVFTITDPAQKLHIPLLISPYSYTTYRGS
SIO_010081: LOC121076559
subclass of: SO_0000673
so part of: LOC121076559
location: join(1234420..1234458,1234573..1234716,1234842..1234997,1235072..1235216,1235337..1235512,1235613..1235741,1235838..1236356,1236463..1236605,1236713..1236937,1237182..1237405,1239099..1239238,1239380..1239515,1239734..1239823)
location: region:1234420-1239823:1
so has part: feature:1234420-1234458:1:exon
so has part: feature:1234573-1234716:1:exon
so has part: feature:1234842-1234997:1:exon
so has part: feature:1235072-1235216:1:exon
so has part: feature:1235337-1235512:1:exon
so has part: feature:1235613-1235741:1:exon
so has part: feature:1235838-1236356:1:exon
so has part: feature:1236463-1236605:1:exon
so has part: feature:1236713-1236937:1:exon
so has part: feature:1237182-1237405:1:exon
so has part: feature:1239099-1239238:1:exon
so has part: feature:1239380-1239515:1:exon
so has part: feature:1239734-1239823:1:exon

XP_040426908.1
type: Protein
SIO_000068: ncbiprotein

position:1234420:1
position: 1234420
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1239823:1
position: 1239823
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1234420-1234458:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1234573-1234716:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1234842-1234997:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1235072-1235216:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1235337-1235512:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1235613-1235741:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1235838-1236356:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1236463-1236605:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1236713-1236937:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1237182-1237405:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1239099-1239238:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1239380-1239515:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1239734-1239823:1:exon

GAS8
type: Gene
subclass of: SO_0000704
RO_0002162: 8869
gene: GAS8
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1239893..1247655)
location: region:1239893-1247655:-1
so has part: feature:1239893-1247655:-1:exon
subclass of: SO_0000010

121076560
type: Gene
SIO_000068: ncbigene

position:1239893:-1
position: 1239893
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1247655:-1
position: 1247655
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1239893-1247655:-1:exon

GAS8
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8869
gene: GAS8
product: growth arrest specific 8, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 22 long SRA reads, 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 12 samples with support for all annotated introns
transcript id: XM_040570976.1
SIO_010081: GAS8
subclass of: SO_0000673
so part of: GAS8
location: complement(join(1239893..1240188,1240461..1240526,1242017..1242226,1243437..1243523,1243893..1244060,1244348..1244553,1245157..1245211,1245750..1245956,1246148..1246345,1247323..1247412,1247579..1247655))
location: region:1239893-1247655:-1
so has part: feature:1247579-1247655:-1:exon
so has part: feature:1247323-1247412:-1:exon
so has part: feature:1246148-1246345:-1:exon
so has part: feature:1245750-1245956:-1:exon
so has part: feature:1245157-1245211:-1:exon
so has part: feature:1244348-1244553:-1:exon
so has part: feature:1243893-1244060:-1:exon
so has part: feature:1243437-1243523:-1:exon
so has part: feature:1242017-1242226:-1:exon
so has part: feature:1240461-1240526:-1:exon
so has part: feature:1239893-1240188:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1247579-1247655:-1:exon

position:1247579:-1
position: 1247579
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1247323-1247412:-1:exon

position:1247323:-1
position: 1247323
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1247412:-1
position: 1247412
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1246148-1246345:-1:exon

position:1246148:-1
position: 1246148
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1246345:-1
position: 1246345
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1245750-1245956:-1:exon

position:1245750:-1
position: 1245750
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1245956:-1
position: 1245956
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1245157-1245211:-1:exon

position:1245157:-1
position: 1245157
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1245211:-1
position: 1245211
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1244348-1244553:-1:exon

position:1244348:-1
position: 1244348
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1244553:-1
position: 1244553
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1243893-1244060:-1:exon

position:1243893:-1
position: 1243893
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1244060:-1
position: 1244060
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1243437-1243523:-1:exon

position:1243437:-1
position: 1243437
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1243523:-1
position: 1243523
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:1242017-1242226:-1:exon

position:1242017:-1
position: 1242017
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1242226:-1
position: 1242226
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:1240461-1240526:-1:exon

position:1240461:-1
position: 1240461
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1240526:-1
position: 1240526
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:1239893-1240188:-1:exon

position:1240188:-1
position: 1240188
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

GAS8
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8869
gene: GAS8
product: growth arrest specific 8, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 long SRA reads, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 10 samples with support for all annotated introns
transcript id: XM_040570975.1
SIO_010081: GAS8
subclass of: SO_0000673
so part of: GAS8
location: complement(join(1239893..1240188,1240461..1240526,1242017..1242226,1243078..1243164,1243437..1243523,1243893..1244060,1244348..1244553,1245157..1245211,1245750..1245956,1246148..1246345,1247323..1247412,1247579..1247655))
location: region:1239893-1247655:-1
so has part: feature:1247579-1247655:-1:exon
so has part: feature:1247323-1247412:-1:exon
so has part: feature:1246148-1246345:-1:exon
so has part: feature:1245750-1245956:-1:exon
so has part: feature:1245157-1245211:-1:exon
so has part: feature:1244348-1244553:-1:exon
so has part: feature:1243893-1244060:-1:exon
so has part: feature:1243437-1243523:-1:exon
so has part: feature:1243078-1243164:-1:exon
so has part: feature:1242017-1242226:-1:exon
so has part: feature:1240461-1240526:-1:exon
so has part: feature:1239893-1240188:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1247579-1247655:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1247323-1247412:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1246148-1246345:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1245750-1245956:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1245157-1245211:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1244348-1244553:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1243893-1244060:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1243437-1243523:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1243078-1243164:-1:exon

position:1243078:-1
position: 1243078
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1243164:-1
position: 1243164
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:1242017-1242226:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1240461-1240526:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1239893-1240188:-1:exon

GAS8
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8869
gene: GAS8
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: dynein regulatory complex subunit 4 isoform X2
translation: MAPKKAGRKGKGGKAPAVADASGPEEMSREQLGEHIVRLREELDREREERNYFQLERDKIHTFWEITRRQLEEKKAELRNKDREMEEAEERHQVEIKVYKQKVKHLLYEHQENLTELKAEGTLSMKRAQKDHWAQEMELRKDMRSLKVELKEQELANEVVVKNMRLKQEEEITRLCNDFERQVKEIEAKYSKKMQVLRDELDLRRKTEIHEVEERKNNQISELMKNHEKAFSEIKNYYNDITLKNLALISLLKEQMEEMKKRENQLEKEKADVLLQNKQLKEPLQQAQEQAFELQKKLAHYDMDKEALTNTKARLKVIQKELKDLQWEHEVLEQRFSKVQAERDELYQKFTKAINEVQQKTGFKNLLLERKLKGLLDILEKKEVELSEVFAASNLDPGALSLVSHKLEDVLNSKNSAIEDLQFQLARVCKAHNDMLQTLEAKLTAFGIPLDNLGFKPLESPVLGQALGQGPAGLVAVPT
SIO_010081: GAS8
subclass of: SO_0000673
so part of: GAS8
location: complement(join(1240039..1240188,1240461..1240526,1242017..1242226,1243437..1243523,1243893..1244060,1244348..1244553,1245157..1245211,1245750..1245956,1246148..1246345,1247323..1247412,1247579..1247581))
location: region:1240039-1247581:-1
so has part: feature:1247579-1247581:-1:exon
so has part: feature:1247323-1247412:-1:exon
so has part: feature:1246148-1246345:-1:exon
so has part: feature:1245750-1245956:-1:exon
so has part: feature:1245157-1245211:-1:exon
so has part: feature:1244348-1244553:-1:exon
so has part: feature:1243893-1244060:-1:exon
so has part: feature:1243437-1243523:-1:exon
so has part: feature:1242017-1242226:-1:exon
so has part: feature:1240461-1240526:-1:exon
so has part: feature:1240039-1240188:-1:exon

XP_040426910.1
type: Protein
SIO_000068: ncbiprotein

position:1240039:-1
position: 1240039
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1247581:-1
position: 1247581
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1247579-1247581:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1247323-1247412:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1246148-1246345:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1245750-1245956:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1245157-1245211:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1244348-1244553:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1243893-1244060:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1243437-1243523:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1242017-1242226:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1240461-1240526:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1240039-1240188:-1:exon

GAS8
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8869
gene: GAS8
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: dynein regulatory complex subunit 4 isoform X1
translation: MAPKKAGRKGKGGKAPAVADASGPEEMSREQLGEHIVRLREELDREREERNYFQLERDKIHTFWEITRRQLEEKKAELRNKDREMEEAEERHQVEIKVYKQKVKHLLYEHQENLTELKAEGTLSMKRAQKDHWAQEMELRKDMRSLKVELKEQELANEVVVKNMRLKQEEEITRLCNDFERQVKEIEAKYSKKMQVLRDELDLRRKTEIHEVEERKNNQISELMKNHEKAFSEIKNYYNDITLKNLALISLLKEQMEEMKKRENQLEKEKADVLLQNKQLKEPLQQAQEQAFELQKKLAHYDMDKEALTNTKARLKVIQKELKDLQWEHEVLEQRFSKAAALGHERIRVERLPLQWGEPATDSLVLLVQAERDELYQKFTKAINEVQQKTGFKNLLLERKLKGLLDILEKKEVELSEVFAASNLDPGALSLVSHKLEDVLNSKNSAIEDLQFQLARVCKAHNDMLQTLEAKLTAFGIPLDNLGFKPLESPVLGQALGQGPAGLVAVPT
SIO_010081: GAS8
subclass of: SO_0000673
so part of: GAS8
location: complement(join(1240039..1240188,1240461..1240526,1242017..1242226,1243078..1243164,1243437..1243523,1243893..1244060,1244348..1244553,1245157..1245211,1245750..1245956,1246148..1246345,1247323..1247412,1247579..1247581))
location: region:1240039-1247581:-1
so has part: feature:1247579-1247581:-1:exon
so has part: feature:1247323-1247412:-1:exon
so has part: feature:1246148-1246345:-1:exon
so has part: feature:1245750-1245956:-1:exon
so has part: feature:1245157-1245211:-1:exon
so has part: feature:1244348-1244553:-1:exon
so has part: feature:1243893-1244060:-1:exon
so has part: feature:1243437-1243523:-1:exon
so has part: feature:1243078-1243164:-1:exon
so has part: feature:1242017-1242226:-1:exon
so has part: feature:1240461-1240526:-1:exon
so has part: feature:1240039-1240188:-1:exon

XP_040426909.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1247579-1247581:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1247323-1247412:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1246148-1246345:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1245750-1245956:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1245157-1245211:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1244348-1244553:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1243893-1244060:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1243437-1243523:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1243078-1243164:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1242017-1242226:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1240461-1240526:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1240039-1240188:-1:exon

DBNDD1
type: Gene
subclass of: SO_0000704
RO_0002162: 8869
gene: DBNDD1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1248135..1251287
location: region:1248135-1251287:1
so has part: feature:1248135-1251287:1:exon
subclass of: SO_0000010

121076562
type: Gene
SIO_000068: ncbigene

position:1248135:1
position: 1248135
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1251287:1
position: 1251287
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1248135-1251287:1:exon

DBNDD1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8869
gene: DBNDD1
product: dysbindin domain containing 1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 12 samples with support for all annotated introns
transcript id: XM_040570978.1
SIO_010081: DBNDD1
subclass of: SO_0000673
so part of: DBNDD1
location: join(1248135..1248294,1250170..1250316,1250516..1250656,1250735..1251287)
location: region:1248135-1251287:1
so has part: feature:1248135-1248294:1:exon
so has part: feature:1250170-1250316:1:exon
so has part: feature:1250516-1250656:1:exon
so has part: feature:1250735-1251287:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1248135-1248294:1:exon

position:1248294:1
position: 1248294
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1250170-1250316:1:exon

position:1250170:1
position: 1250170
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1250316:1
position: 1250316
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1250516-1250656:1:exon

position:1250516:1
position: 1250516
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1250656:1
position: 1250656
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1250735-1251287:1:exon