Cygnus atratus isolate AKBS03 ecotype Queensland, Australia chromosome 24, CAtr_DNAZoo_HiC_assembly, whole genome shotgun sequence.
type: Entry
definition: Cygnus atratus isolate AKBS03 ecotype Queensland, Australia chromosome 24, CAtr_DNAZoo_HiC_assembly, whole genome shotgun sequence.
sequence version: NC_066385.1
sequence date: 2023-02-28
sequence: sequence
division: CON
label: NC_066385.1
type: RefSeq
SIO_000068: refseq
dblink: PRJNA646059
dblink: SAMN15332785
keyword: WGS
keyword: RefSeq
source: Cygnus atratus (black swan)
organism: Cygnus atratus
taxonomy: Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Galloanserae; Anseriformes; Anatidae; Anserinae; Cygnus.
comment: REFSEQ INFORMATION: The reference sequence is identical to\nCM044820.1.\nAssembly name: CAtr_DNAZoo_HiC_assembly\nThe genomic sequence for this RefSeq record is from the\nwhole-genome assembly released by The University of Queensland on\n2022/08/03. The original whole-genome shotgun project has the\naccession JABXOC000000000.2.\n\n##Genome-Assembly-Data-START##\nAssembly Provider :: The University of Queensland\nAssembly Date :: 02-MAY-2021\nAssembly Method :: FALCON-Unzip v. 2019-12-18; FALCON v.\n 2019-12-18; SMRTLink v. v7.0.1; 3D-DNA\n pipeline (DNAzzo) v. 2021-05-02\nAssembly Name :: CAtr_DNAZoo_HiC_assembly\nGenome Representation :: Full\nExpected Final Version :: No\nGenome Coverage :: 90.0x\nSequencing Technology :: PacBio Sequel; Illumina\n##Genome-Assembly-Data-END##\n\n##Genome-Annotation-Data-START##\nAnnotation Provider :: NCBI RefSeq\nAnnotation Status :: Updated annotation\nAnnotation Name :: GCF_013377495.2-RS_2023_02\nAnnotation Pipeline :: NCBI eukaryotic genome annotation\n pipeline\nAnnotation Software Version :: 10.1\nAnnotation Method :: Gnomon; cmsearch; tRNAscan-SE\nFeatures Annotated :: Gene; mRNA; CDS; ncRNA\nAnnotation Date :: 02/27/2023\n##Genome-Annotation-Data-END##

sequence
subclass of: SO_0000340
sequence length: 7008518
topology: linear
so has quality: SO_0000987
location: 1..7008518
location: region:1-7008518:1
RO_0002162: 8868

NC_066385
type: RefSeq
SIO_000068: refseq

PRJNA646059
type: BioProject
SIO_000068: bioproject

SAMN15332785
type: BioSample
SIO_000068: biosample

position:1:1
position: 1
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7008518:1
position: 7008518
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

feature:1-7008518:1:source
so part of: sequence
organism: Cygnus atratus
mol type: genomic DNA
isolate: AKBS03
chromosome: 24
sex: male
tissue type: stomach
dev stage: Adult
ecotype: Queensland, Australia
country: Australia: Queensland
collection date: 2018-12-21

8868
type: Taxonomy
SIO_000068: taxonomy

LOC118255308
type: Gene
subclass of: SO_0000704
RO_0002162: 8868
gene: LOC118255308
note: uncharacterized LOC118255308; Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(13736..32859)
location: region:13736-32859:-1
so has part: feature:13736-32859:-1:exon
subclass of: SO_0000011

118255308
type: Gene
SIO_000068: ncbigene

position:13736:-1
position: 13736
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:32859:-1
position: 32859
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:13736-32859:-1:exon

LOC118255308
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 8868
nc RNA class: lncRNA
gene: LOC118255308
product: uncharacterized LOC118255308
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XR_004780930.2
SIO_010081: LOC118255308
subclass of: SO_0000673
so part of: LOC118255308
location: complement(join(13736..16055,16174..16275,17817..17912,32563..32859))
location: region:13736-32859:-1
so has part: feature:32563-32859:-1:exon
so has part: feature:17817-17912:-1:exon
so has part: feature:16174-16275:-1:exon
so has part: feature:13736-16055:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:32563-32859:-1:exon

position:32563:-1
position: 32563
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:17817-17912:-1:exon

position:17817:-1
position: 17817
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:17912:-1
position: 17912
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:16174-16275:-1:exon

position:16174:-1
position: 16174
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:16275:-1
position: 16275
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:13736-16055:-1:exon

position:16055:-1
position: 16055
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

NGF
type: Gene
subclass of: SO_0000704
RO_0002162: 8868
gene: NGF
note: nerve growth factor; Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 62637..98277
location: region:62637-98277:1
so has part: feature:62637-98277:1:exon
subclass of: SO_0000010

118255306
type: Gene
SIO_000068: ncbigene

position:62637:1
position: 62637
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:98277:1
position: 98277
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:62637-98277:1:exon

NGF
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8868
gene: NGF
product: nerve growth factor, transcript variant X1
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_035561400.2
SIO_010081: NGF
subclass of: SO_0000673
so part of: NGF
location: join(62637..65424,94067..94206,96654..96842,97397..98277)
location: region:62637-98277:1
so has part: feature:62637-65424:1:exon
so has part: feature:94067-94206:1:exon
so has part: feature:96654-96842:1:exon
so has part: feature:97397-98277:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:62637-65424:1:exon

position:65424:1
position: 65424
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:94067-94206:1:exon

position:94067:1
position: 94067
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:94206:1
position: 94206
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:96654-96842:1:exon

position:96654:1
position: 96654
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:96842:1
position: 96842
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:97397-98277:1:exon

position:97397:1
position: 97397
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

NGF
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8868
gene: NGF
product: nerve growth factor, transcript variant X3
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_035561402.2
SIO_010081: NGF
subclass of: SO_0000673
so part of: NGF
location: join(62637..65424,94067..94206,96654..96842,97460..98277)
location: region:62637-98277:1
so has part: feature:62637-65424:1:exon
so has part: feature:94067-94206:1:exon
so has part: feature:96654-96842:1:exon
so has part: feature:97460-98277:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:62637-65424:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:94067-94206:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:96654-96842:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:97460-98277:1:exon

position:97460:1
position: 97460
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

NGF
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8868
gene: NGF
product: nerve growth factor, transcript variant X2
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_035561401.2
SIO_010081: NGF
subclass of: SO_0000673
so part of: NGF
location: join(62637..65424,94067..94206,97397..98277)
location: region:62637-98277:1
so has part: feature:62637-65424:1:exon
so has part: feature:94067-94206:1:exon
so has part: feature:97397-98277:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:62637-65424:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:94067-94206:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:97397-98277:1:exon

LOC118255307
type: Gene
subclass of: SO_0000704
RO_0002162: 8868
gene: LOC118255307
note: uncharacterized LOC118255307; Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(77405..127769)
location: region:77405-127769:-1
so has part: feature:77405-127769:-1:exon
subclass of: SO_0000011

118255307
type: Gene
SIO_000068: ncbigene

position:77405:-1
position: 77405
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:127769:-1
position: 127769
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:77405-127769:-1:exon

LOC118255307
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 8868
nc RNA class: lncRNA
gene: LOC118255307
product: uncharacterized LOC118255307, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 long SRA reads
transcript id: XR_007709125.1
SIO_010081: LOC118255307
subclass of: SO_0000673
so part of: LOC118255307
location: complement(join(77405..77521,85592..85779,107049..107143,125064..125153,127171..127769))
location: region:77405-127769:-1
so has part: feature:127171-127769:-1:exon
so has part: feature:125064-125153:-1:exon
so has part: feature:107049-107143:-1:exon
so has part: feature:85592-85779:-1:exon
so has part: feature:77405-77521:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:127171-127769:-1:exon

position:127171:-1
position: 127171
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:125064-125153:-1:exon

position:125064:-1
position: 125064
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:125153:-1
position: 125153
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:107049-107143:-1:exon

position:107049:-1
position: 107049
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:107143:-1
position: 107143
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:85592-85779:-1:exon

position:85592:-1
position: 85592
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:85779:-1
position: 85779
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:77405-77521:-1:exon

position:77521:-1
position: 77521
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC118255307
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 8868
nc RNA class: lncRNA
gene: LOC118255307
product: uncharacterized LOC118255307, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 long SRA reads
transcript id: XR_004780926.2
SIO_010081: LOC118255307
subclass of: SO_0000673
so part of: LOC118255307
location: complement(join(77542..79446,85592..85779,107049..107143,125064..125153,127171..127768))
location: region:77542-127768:-1
so has part: feature:127171-127768:-1:exon
so has part: feature:125064-125153:-1:exon
so has part: feature:107049-107143:-1:exon
so has part: feature:85592-85779:-1:exon
so has part: feature:77542-79446:-1:exon

position:77542:-1
position: 77542
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:127768:-1
position: 127768
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:127171-127768:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:125064-125153:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:107049-107143:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:85592-85779:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:77542-79446:-1:exon

position:79446:-1
position: 79446
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

NGF
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8868
gene: NGF
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: beta-nerve growth factor isoform X1
translation: MSTWQVHSVMSMLYYTLIIAFFIGTQAAPKSEDNAPLEYPAEHSLPKSHQSNGHHISKAAPQTTHSHSTWTIGRREDINITMDPNLFKKKRFRSPRVLFSTRPPPVSGQGQNMGQLSSAVSLNRTARTKRTAHPVLHRGEFSVCDSVSMWVGDKTTATDIKGKEVTVLGEVNINNNIFKQYFFETKCRDPKPVSSGCRGIDAKHWNSYCTTTHTFVKALTMEGKQAAWRFIRIDTACVCVLSRKSGRP
SIO_010081: NGF
subclass of: SO_0000673
so part of: NGF
location: join(96828..96842,97397..98128)
location: region:96828-98128:1
so has part: feature:96828-96842:1:exon
so has part: feature:97397-98128:1:exon

XP_035417293.1
type: Protein
SIO_000068: ncbiprotein

position:96828:1
position: 96828
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:98128:1
position: 98128
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:96828-96842:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:97397-98128:1:exon

NGF
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8868
gene: NGF
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: beta-nerve growth factor isoform X3
translation: MSTWQAAPKSEDNAPLEYPAEHSLPKSHQSNGHHISKAAPQTTHSHSTWTIGRREDINITMDPNLFKKKRFRSPRVLFSTRPPPVSGQGQNMGQLSSAVSLNRTARTKRTAHPVLHRGEFSVCDSVSMWVGDKTTATDIKGKEVTVLGEVNINNNIFKQYFFETKCRDPKPVSSGCRGIDAKHWNSYCTTTHTFVKALTMEGKQAAWRFIRIDTACVCVLSRKSGRP
SIO_010081: NGF
subclass of: SO_0000673
so part of: NGF
location: join(96828..96842,97460..98128)
location: region:96828-98128:1
so has part: feature:96828-96842:1:exon
so has part: feature:97460-98128:1:exon

XP_035417295.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:96828-96842:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:97460-98128:1:exon

NGF
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8868
gene: NGF
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: beta-nerve growth factor isoform X2
translation: MSMLYYTLIIAFFIGTQAAPKSEDNAPLEYPAEHSLPKSHQSNGHHISKAAPQTTHSHSTWTIGRREDINITMDPNLFKKKRFRSPRVLFSTRPPPVSGQGQNMGQLSSAVSLNRTARTKRTAHPVLHRGEFSVCDSVSMWVGDKTTATDIKGKEVTVLGEVNINNNIFKQYFFETKCRDPKPVSSGCRGIDAKHWNSYCTTTHTFVKALTMEGKQAAWRFIRIDTACVCVLSRKSGRP
SIO_010081: NGF
subclass of: SO_0000673
so part of: NGF
location: 97409..98128
location: region:97409-98128:1
so has part: feature:97409-98128:1:exon

XP_035417294.1
type: Protein
SIO_000068: ncbiprotein

position:97409:1
position: 97409
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:97409-98128:1:exon

TSPAN2
type: Gene
subclass of: SO_0000704
RO_0002162: 8868
gene: TSPAN2
note: tetraspanin 2; Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 130886..155933
location: region:130886-155933:1
so has part: feature:130886-155933:1:exon
subclass of: SO_0000010

118255304
type: Gene
SIO_000068: ncbigene

position:130886:1
position: 130886
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:155933:1
position: 155933
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:130886-155933:1:exon

TSPAN2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8868
gene: TSPAN2
product: tetraspanin 2, transcript variant X3
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_035561399.2
SIO_010081: TSPAN2
subclass of: SO_0000673
so part of: TSPAN2
location: join(130886..131044,134296..134398,146553..146650,147097..147171,147717..147815,148981..149055,149813..149896,154597..155933)
location: region:130886-155933:1
so has part: feature:130886-131044:1:exon
so has part: feature:134296-134398:1:exon
so has part: feature:146553-146650:1:exon
so has part: feature:147097-147171:1:exon
so has part: feature:147717-147815:1:exon
so has part: feature:148981-149055:1:exon
so has part: feature:149813-149896:1:exon
so has part: feature:154597-155933:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:130886-131044:1:exon

position:131044:1
position: 131044
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:134296-134398:1:exon

position:134296:1
position: 134296
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:134398:1
position: 134398
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:146553-146650:1:exon

position:146553:1
position: 146553
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:146650:1
position: 146650
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:147097-147171:1:exon

position:147097:1
position: 147097
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:147171:1
position: 147171
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:147717-147815:1:exon

position:147717:1
position: 147717
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:147815:1
position: 147815
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:148981-149055:1:exon

position:148981:1
position: 148981
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:149055:1
position: 149055
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:149813-149896:1:exon

position:149813:1
position: 149813
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:149896:1
position: 149896
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:154597-155933:1:exon

position:154597:1
position: 154597
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

TSPAN2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8868
gene: TSPAN2
product: tetraspanin 2, transcript variant X1
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_035561397.2
SIO_010081: TSPAN2
subclass of: SO_0000673
so part of: TSPAN2
location: join(130886..131044,134296..134398,146553..146650,147097..147171,147717..147815,148981..149055,149813..149896,149978..150245)
location: region:130886-150245:1
so has part: feature:130886-131044:1:exon
so has part: feature:134296-134398:1:exon
so has part: feature:146553-146650:1:exon
so has part: feature:147097-147171:1:exon
so has part: feature:147717-147815:1:exon
so has part: feature:148981-149055:1:exon
so has part: feature:149813-149896:1:exon
so has part: feature:149978-150245:1:exon

position:150245:1
position: 150245
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:130886-131044:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:134296-134398:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:146553-146650:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:147097-147171:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:147717-147815:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:148981-149055:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:149813-149896:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:149978-150245:1:exon

position:149978:1
position: 149978
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

TSPAN2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8868
gene: TSPAN2
product: tetraspanin 2, transcript variant X2
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_035561398.2
SIO_010081: TSPAN2
subclass of: SO_0000673
so part of: TSPAN2
location: join(130887..131044,134296..134398,146553..146650,147097..147171,147717..147815,148981..149055,149813..149896,151587..152046)
location: region:130887-152046:1
so has part: feature:130887-131044:1:exon
so has part: feature:134296-134398:1:exon
so has part: feature:146553-146650:1:exon
so has part: feature:147097-147171:1:exon
so has part: feature:147717-147815:1:exon
so has part: feature:148981-149055:1:exon
so has part: feature:149813-149896:1:exon
so has part: feature:151587-152046:1:exon

position:130887:1
position: 130887
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:152046:1
position: 152046
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:130887-131044:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:134296-134398:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:146553-146650:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:147097-147171:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:147717-147815:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:148981-149055:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:149813-149896:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:151587-152046:1:exon

position:151587:1
position: 151587
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

TSPAN2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8868
gene: TSPAN2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: tetraspanin-2 isoform X3
translation: MGTAREEMRRVKVLLFVFNLSFWLAGLAVIAFGLWLRFGGVMAEFASDKKPPEYFFIGLYVLVGAGALMTMVGFFGCCGAARESQFLLGAFFACLLVIFAAEVTAGVFAFIGKKVAIQEVQKIYEDIYDEYMKNPGKVNRTIYHYHLALQCCGKDNTEQQMGLPCPENIQMPKNCLVEIQNVLDANLHLVGIVGIAIAGITMH
SIO_010081: TSPAN2
subclass of: SO_0000673
so part of: TSPAN2
location: join(130976..131044,134296..134398,146553..146650,147097..147171,147717..147815,148981..149055,149813..149896,154597..154605)
location: region:130976-154605:1
so has part: feature:130976-131044:1:exon
so has part: feature:134296-134398:1:exon
so has part: feature:146553-146650:1:exon
so has part: feature:147097-147171:1:exon
so has part: feature:147717-147815:1:exon
so has part: feature:148981-149055:1:exon
so has part: feature:149813-149896:1:exon
so has part: feature:154597-154605:1:exon

XP_035417292.1
type: Protein
SIO_000068: ncbiprotein

position:130976:1
position: 130976
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:154605:1
position: 154605
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:130976-131044:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:134296-134398:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:146553-146650:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:147097-147171:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:147717-147815:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:148981-149055:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:149813-149896:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:154597-154605:1:exon

TSPAN2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8868
gene: TSPAN2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: tetraspanin-2 isoform X2
translation: MGTAREEMRRVKVLLFVFNLSFWLAGLAVIAFGLWLRFGGVMAEFASDKKPPEYFFIGLYVLVGAGALMTMVGFFGCCGAARESQFLLGAFFACLLVIFAAEVTAGVFAFIGKKVAIQEVQKIYEDIYDEYMKNPGKVNRTIYHYHLALQCCGKDNTEQQMGLPCPENIQMPKNCLVEIQNVLDANLHLVGIVGIAIAGITIFGMIFSMVLCCAIRNTREMI
SIO_010081: TSPAN2
subclass of: SO_0000673
so part of: TSPAN2
location: join(130976..131044,134296..134398,146553..146650,147097..147171,147717..147815,148981..149055,149813..149896,151587..151652)
location: region:130976-151652:1
so has part: feature:130976-131044:1:exon
so has part: feature:134296-134398:1:exon
so has part: feature:146553-146650:1:exon
so has part: feature:147097-147171:1:exon
so has part: feature:147717-147815:1:exon
so has part: feature:148981-149055:1:exon
so has part: feature:149813-149896:1:exon
so has part: feature:151587-151652:1:exon

XP_035417291.1
type: Protein
SIO_000068: ncbiprotein

position:151652:1
position: 151652
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:130976-131044:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:134296-134398:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:146553-146650:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:147097-147171:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:147717-147815:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:148981-149055:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:149813-149896:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:151587-151652:1:exon

TSPAN2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8868
gene: TSPAN2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: tetraspanin-2 isoform X1
translation: MGTAREEMRRVKVLLFVFNLSFWLAGLAVIAFGLWLRFGGVMAEFASDKKPPEYFFIGLYVLVGAGALMTMVGFFGCCGAARESQFLLGAFFACLLVIFAAEVTAGVFAFIGKKVAIQEVQKIYEDIYDEYMKNPGKVNRTIYHYHLALQCCGKDNTEQQMGLPCPENIQMPKNCLVEIQNVLDANLHLVGIVGIAIAGITLLVRFLSVSCEMAFQENAVSSIGSM
SIO_010081: TSPAN2
subclass of: SO_0000673
so part of: TSPAN2
location: join(130976..131044,134296..134398,146553..146650,147097..147171,147717..147815,148981..149055,149813..149896,149978..150055)
location: region:130976-150055:1
so has part: feature:130976-131044:1:exon
so has part: feature:134296-134398:1:exon
so has part: feature:146553-146650:1:exon
so has part: feature:147097-147171:1:exon
so has part: feature:147717-147815:1:exon
so has part: feature:148981-149055:1:exon
so has part: feature:149813-149896:1:exon
so has part: feature:149978-150055:1:exon

XP_035417290.1
type: Protein
SIO_000068: ncbiprotein

position:150055:1
position: 150055
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:130976-131044:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:134296-134398:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:146553-146650:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:147097-147171:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:147717-147815:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:148981-149055:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:149813-149896:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:149978-150055:1:exon

LOC126913564
type: Gene
subclass of: SO_0000704
RO_0002162: 8868
gene: LOC126913564
note: uncharacterized LOC126913564; Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(131187..155755)
location: region:131187-155755:-1
so has part: feature:131187-155755:-1:exon
subclass of: SO_0000011

126913564
type: Gene
SIO_000068: ncbigene

position:131187:-1
position: 131187
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:155755:-1
position: 155755
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:131187-155755:-1:exon

LOC126913564
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 8868
nc RNA class: lncRNA
gene: LOC126913564
product: uncharacterized LOC126913564, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
transcript id: XR_007709128.1
SIO_010081: LOC126913564
subclass of: SO_0000673
so part of: LOC126913564
location: complement(join(131187..131644,133527..133644,155606..155755))
location: region:131187-155755:-1
so has part: feature:155606-155755:-1:exon
so has part: feature:133527-133644:-1:exon
so has part: feature:131187-131644:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:155606-155755:-1:exon

position:155606:-1
position: 155606
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:133527-133644:-1:exon

position:133527:-1
position: 133527
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:133644:-1
position: 133644
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:131187-131644:-1:exon

position:131644:-1
position: 131644
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC126913564
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 8868
nc RNA class: lncRNA
gene: LOC126913564
product: uncharacterized LOC126913564, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
transcript id: XR_007709127.1
SIO_010081: LOC126913564
subclass of: SO_0000673
so part of: LOC126913564
location: complement(join(131187..131644,131822..131935,133527..133644,155606..155755))
location: region:131187-155755:-1
so has part: feature:155606-155755:-1:exon
so has part: feature:133527-133644:-1:exon
so has part: feature:131822-131935:-1:exon
so has part: feature:131187-131644:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:155606-155755:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:133527-133644:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:131822-131935:-1:exon

position:131822:-1
position: 131822
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:131935:-1
position: 131935
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:131187-131644:-1:exon

LOC126913564
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 8868
nc RNA class: lncRNA
gene: LOC126913564
product: uncharacterized LOC126913564, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
transcript id: XR_007709126.1
SIO_010081: LOC126913564
subclass of: SO_0000673
so part of: LOC126913564
location: complement(join(131651..131935,133527..133644,155606..155755))
location: region:131651-155755:-1
so has part: feature:155606-155755:-1:exon
so has part: feature:133527-133644:-1:exon
so has part: feature:131651-131935:-1:exon

position:131651:-1
position: 131651
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:155606-155755:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:133527-133644:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:131651-131935:-1:exon

LOC118255338
type: Gene
subclass of: SO_0000704
RO_0002162: 8868
gene: LOC118255338
note: uncharacterized LOC118255338; Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 156954..168195
location: region:156954-168195:1
so has part: feature:156954-168195:1:exon
subclass of: SO_0000011

118255338
type: Gene
SIO_000068: ncbigene

position:156954:1
position: 156954
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:168195:1
position: 168195
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:156954-168195:1:exon

LOC118255338
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 8868
nc RNA class: lncRNA
gene: LOC118255338
product: uncharacterized LOC118255338
note: Derived by automated computational analysis using gene prediction method: Gnomon.
transcript id: XR_004780933.2
SIO_010081: LOC118255338
subclass of: SO_0000673
so part of: LOC118255338
location: join(156954..157146,157991..158132,167658..168195)
location: region:156954-168195:1
so has part: feature:156954-157146:1:exon
so has part: feature:157991-158132:1:exon
so has part: feature:167658-168195:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:156954-157146:1:exon

position:157146:1
position: 157146
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:157991-158132:1:exon

position:157991:1
position: 157991
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:158132:1
position: 158132
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:167658-168195:1:exon

position:167658:1
position: 167658
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

TSHB
type: Gene
subclass of: SO_0000704
RO_0002162: 8868
gene: TSHB
note: thyroid stimulating hormone subunit beta; Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(158818..162211)
location: region:158818-162211:-1
so has part: feature:158818-162211:-1:exon
subclass of: SO_0000010

118255337
type: Gene
SIO_000068: ncbigene

position:158818:-1
position: 158818
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:162211:-1
position: 162211
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:158818-162211:-1:exon

TSHB
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8868
gene: TSHB
product: thyroid stimulating hormone subunit beta, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins
transcript id: XM_050715328.1
SIO_010081: TSHB
subclass of: SO_0000673
so part of: TSHB
location: complement(join(158818..158838,159054..159118,160000..160153,160943..161105,161976..162203))
location: region:158818-162203:-1
so has part: feature:161976-162203:-1:exon
so has part: feature:160943-161105:-1:exon
so has part: feature:160000-160153:-1:exon
so has part: feature:159054-159118:-1:exon
so has part: feature:158818-158838:-1:exon

position:162203:-1
position: 162203
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:161976-162203:-1:exon

position:161976:-1
position: 161976
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:160943-161105:-1:exon

position:160943:-1
position: 160943
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:161105:-1
position: 161105
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:160000-160153:-1:exon

position:160000:-1
position: 160000
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:160153:-1
position: 160153
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:159054-159118:-1:exon

position:159054:-1
position: 159054
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:159118:-1
position: 159118
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:158818-158838:-1:exon

position:158838:-1
position: 158838
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

TSHB
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8868
gene: TSHB
product: thyroid stimulating hormone subunit beta, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins
transcript id: XM_035561440.2
SIO_010081: TSHB
subclass of: SO_0000673
so part of: TSHB
location: complement(join(158820..158988,159047..159118,160000..160153,160943..161105,161976..162211))
location: region:158820-162211:-1
so has part: feature:161976-162211:-1:exon
so has part: feature:160943-161105:-1:exon
so has part: feature:160000-160153:-1:exon
so has part: feature:159047-159118:-1:exon
so has part: feature:158820-158988:-1:exon

position:158820:-1
position: 158820
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:161976-162211:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:160943-161105:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:160000-160153:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:159047-159118:-1:exon

position:159047:-1
position: 159047
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:158820-158988:-1:exon

position:158988:-1
position: 158988
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

TSHB
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8868
gene: TSHB
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: thyrotropin subunit beta isoform X4
translation: MNPFFVMSLLFGLTFGQTASLCAPSEYTIHVEKRECAYCLAINTTICAGFCMTRDSNGKKLLLKSALSQNVCTYKEMLYQTALIPGCPHHTIPYYSYPVAISCKCGQPSPSEFQSDLSAIIFAEHAQE
SIO_010081: TSHB
subclass of: SO_0000673
so part of: TSHB
location: complement(join(158833..158838,159054..159118,160000..160153,160943..161104))
location: region:158833-161104:-1
so has part: feature:160943-161104:-1:exon
so has part: feature:160000-160153:-1:exon
so has part: feature:159054-159118:-1:exon
so has part: feature:158833-158838:-1:exon

XP_050571285.1
type: Protein
SIO_000068: ncbiprotein

position:158833:-1
position: 158833
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:161104:-1
position: 161104
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:160943-161104:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:160000-160153:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:159054-159118:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:158833-158838:-1:exon

TSHB
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8868
gene: TSHB
product: thyroid stimulating hormone subunit beta, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins
transcript id: XM_035561442.2
SIO_010081: TSHB
subclass of: SO_0000673
so part of: TSHB
location: complement(join(158850..158988,159054..159118,160000..160153,160943..161105,161976..162203))
location: region:158850-162203:-1
so has part: feature:161976-162203:-1:exon
so has part: feature:160943-161105:-1:exon
so has part: feature:160000-160153:-1:exon
so has part: feature:159054-159118:-1:exon
so has part: feature:158850-158988:-1:exon

position:158850:-1
position: 158850
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:161976-162203:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:160943-161105:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:160000-160153:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:159054-159118:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:158850-158988:-1:exon

TSHB
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8868
gene: TSHB
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: thyrotropin subunit beta isoform X1
translation: MNPFFVMSLLFGLTFGQTASLCAPSEYTIHVEKRECAYCLAINTTICAGFCMTRDSNGKKLLLKSALSQNVCTYKEMLYQTALIPGCPHHTIPYYSYPVAISCKCGQPSPSEFQSDLSAIIFAEHAQVRTLTIQWQVLIVLDQPLGMRASFPLVQLIPTQSRTYRIQW
SIO_010081: TSHB
subclass of: SO_0000673
so part of: TSHB
location: complement(join(158870..158988,159047..159118,160000..160153,160943..161104))
location: region:158870-161104:-1
so has part: feature:160943-161104:-1:exon
so has part: feature:160000-160153:-1:exon
so has part: feature:159047-159118:-1:exon
so has part: feature:158870-158988:-1:exon

XP_035417333.1
type: Protein
SIO_000068: ncbiprotein

position:158870:-1
position: 158870
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:160943-161104:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:160000-160153:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:159047-159118:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:158870-158988:-1:exon

TSHB
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8868
gene: TSHB
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: thyrotropin subunit beta isoform X3
translation: MNPFFVMSLLFGLTFGQTASLCAPSEYTIHVEKRECAYCLAINTTICAGFCMTRDSNGKKLLLKSALSQNVCTYKEMLYQTALIPGCPHHTIPYYSYPVAISCKCGQPSPSEFQSDLSAIIFAEHAQL
SIO_010081: TSHB
subclass of: SO_0000673
so part of: TSHB
location: complement(join(158983..158988,159054..159118,160000..160153,160943..161104))
location: region:158983-161104:-1
so has part: feature:160943-161104:-1:exon
so has part: feature:160000-160153:-1:exon
so has part: feature:159054-159118:-1:exon
so has part: feature:158983-158988:-1:exon

XP_035417335.1
type: Protein
SIO_000068: ncbiprotein

position:158983:-1
position: 158983
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:160943-161104:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:160000-160153:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:159054-159118:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:158983-158988:-1:exon

TSHB
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8868
gene: TSHB
product: thyroid stimulating hormone subunit beta, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 14 Proteins
transcript id: XM_035561441.2
SIO_010081: TSHB
subclass of: SO_0000673
so part of: TSHB
location: complement(join(159833..160153,160943..161105,161976..162188))
location: region:159833-162188:-1
so has part: feature:161976-162188:-1:exon
so has part: feature:160943-161105:-1:exon
so has part: feature:159833-160153:-1:exon

position:159833:-1
position: 159833
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:162188:-1
position: 162188
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:161976-162188:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:160943-161105:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:159833-160153:-1:exon

TSHB
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8868
gene: TSHB
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: thyrotropin subunit beta isoform X2
translation: MNPFFVMSLLFGLTFGQTASLCAPSEYTIHVEKRECAYCLAINTTICAGFCMTRDSNGKKLLLKSALSQNVCTYKEMLYQTALIPGCPHHTIPYYSYPVAISCKCGKCNTDYSDCVHEKVRPNYCTKPQKLCNM
SIO_010081: TSHB
subclass of: SO_0000673
so part of: TSHB
location: complement(join(159911..160153,160943..161104))
location: region:159911-161104:-1
so has part: feature:160943-161104:-1:exon
so has part: feature:159911-160153:-1:exon

XP_035417334.1
type: Protein
SIO_000068: ncbiprotein

position:159911:-1
position: 159911
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:160943-161104:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:159911-160153:-1:exon

SYCP1
type: Gene
subclass of: SO_0000704
RO_0002162: 8868
gene: SYCP1
note: synaptonemal complex protein 1; Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(170282..198050)
location: region:170282-198050:-1
so has part: feature:170282-198050:-1:exon
subclass of: SO_0000010

118255396
type: Gene
SIO_000068: ncbigene

position:170282:-1
position: 170282
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:198050:-1
position: 198050
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:170282-198050:-1:exon

SYCP1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8868
gene: SYCP1
product: synaptonemal complex protein 1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 long SRA read, 2 Proteins
transcript id: XM_035561560.2
SIO_010081: SYCP1
subclass of: SO_0000673
so part of: SYCP1
location: complement(join(170282..171475,171562..171648,172005..172142,172610..172786,175096..175170,176088..176180,176951..177061,177702..177818,179026..179088,179957..180019,180360..180422,181104..181194,181876..181946,182171..182288,182893..182996,183987..184091,185082..185143,186323..186390,187476..187660,187793..187887,189284..189392,190388..190461,191482..191551,192657..192715,194015..194088,194272..194339,195169..195333,196653..196699,196856..196940,197929..198050))
location: region:170282-198050:-1
so has part: feature:197929-198050:-1:exon
so has part: feature:196856-196940:-1:exon
so has part: feature:196653-196699:-1:exon
so has part: feature:195169-195333:-1:exon
so has part: feature:194272-194339:-1:exon
so has part: feature:194015-194088:-1:exon
so has part: feature:192657-192715:-1:exon
so has part: feature:191482-191551:-1:exon
so has part: feature:190388-190461:-1:exon
so has part: feature:189284-189392:-1:exon
so has part: feature:187793-187887:-1:exon
so has part: feature:187476-187660:-1:exon
so has part: feature:186323-186390:-1:exon
so has part: feature:185082-185143:-1:exon
so has part: feature:183987-184091:-1:exon
so has part: feature:182893-182996:-1:exon
so has part: feature:182171-182288:-1:exon
so has part: feature:181876-181946:-1:exon
so has part: feature:181104-181194:-1:exon
so has part: feature:180360-180422:-1:exon
so has part: feature:179957-180019:-1:exon
so has part: feature:179026-179088:-1:exon
so has part: feature:177702-177818:-1:exon
so has part: feature:176951-177061:-1:exon
so has part: feature:176088-176180:-1:exon
so has part: feature:175096-175170:-1:exon
so has part: feature:172610-172786:-1:exon
so has part: feature:172005-172142:-1:exon
so has part: feature:171562-171648:-1:exon
so has part: feature:170282-171475:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:197929-198050:-1:exon

position:197929:-1
position: 197929
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:196856-196940:-1:exon

position:196856:-1
position: 196856
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:196940:-1
position: 196940
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:196653-196699:-1:exon

position:196653:-1
position: 196653
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:196699:-1
position: 196699
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:195169-195333:-1:exon

position:195169:-1
position: 195169
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:195333:-1
position: 195333
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:194272-194339:-1:exon

position:194272:-1
position: 194272
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:194339:-1
position: 194339
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:194015-194088:-1:exon

position:194015:-1
position: 194015
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:194088:-1
position: 194088
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:192657-192715:-1:exon

position:192657:-1
position: 192657
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:192715:-1
position: 192715
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:191482-191551:-1:exon

position:191482:-1
position: 191482
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:191551:-1
position: 191551
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:190388-190461:-1:exon

position:190388:-1
position: 190388
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:190461:-1
position: 190461
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:189284-189392:-1:exon

position:189284:-1
position: 189284
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:189392:-1
position: 189392
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:187793-187887:-1:exon

position:187793:-1
position: 187793
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:187887:-1
position: 187887
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:187476-187660:-1:exon

position:187476:-1
position: 187476
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:187660:-1
position: 187660
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:186323-186390:-1:exon

position:186323:-1
position: 186323
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:186390:-1
position: 186390
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:185082-185143:-1:exon

position:185082:-1
position: 185082
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:185143:-1
position: 185143
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:183987-184091:-1:exon

position:183987:-1
position: 183987
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:184091:-1
position: 184091
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:182893-182996:-1:exon

position:182893:-1
position: 182893
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:182996:-1
position: 182996
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:182171-182288:-1:exon

position:182171:-1
position: 182171
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:182288:-1
position: 182288
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:181876-181946:-1:exon

position:181876:-1
position: 181876
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:181946:-1
position: 181946
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:181104-181194:-1:exon

position:181104:-1
position: 181104
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:181194:-1
position: 181194
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:180360-180422:-1:exon

position:180360:-1
position: 180360
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:180422:-1
position: 180422
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:179957-180019:-1:exon

position:179957:-1
position: 179957
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:180019:-1
position: 180019
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 22
SIO_000628: feature:179026-179088:-1:exon

position:179026:-1
position: 179026
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:179088:-1
position: 179088
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 23
SIO_000628: feature:177702-177818:-1:exon

position:177702:-1
position: 177702
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:177818:-1
position: 177818
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 24
SIO_000628: feature:176951-177061:-1:exon

position:176951:-1
position: 176951
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:177061:-1
position: 177061
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 25
SIO_000628: feature:176088-176180:-1:exon

position:176088:-1
position: 176088
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:176180:-1
position: 176180
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 26
SIO_000628: feature:175096-175170:-1:exon

position:175096:-1
position: 175096
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:175170:-1
position: 175170
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 27
SIO_000628: feature:172610-172786:-1:exon

position:172610:-1
position: 172610
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:172786:-1
position: 172786
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 28
SIO_000628: feature:172005-172142:-1:exon

position:172005:-1
position: 172005
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:172142:-1
position: 172142
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 29
SIO_000628: feature:171562-171648:-1:exon

position:171562:-1
position: 171562
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:171648:-1
position: 171648
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 30
SIO_000628: feature:170282-171475:-1:exon

position:171475:-1
position: 171475
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

SYCP1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8868
gene: SYCP1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: synaptonemal complex protein 1
translation: MEKGKPFKLFVPPRLSGGQVSAVKPQTSSRAAGLCQGFNKCPDDDFNSPFVMTNTLNHGEITDSDAISQQVKLCSEIDEENIETMNELYSKLYKEAEKIKRWKVTVESELKQKERKLQENRKIIEAQRKAIQELQFENEKLSLKLEDEICENKDLLKENSTSRHLCNLLKETCTHFTEKSTKYEHEREETRQLHVELNNNIERMIVAFEELRVQAENTRLEMCFKLKEEAERVDKFEKECKLEVSMKEKQISVLTIQSGEKDDVIKDLKTQLQESKNKIADLEEAKRLEGEMLKESKLNQEYLRAELEEAKVSLQKTEATQKSLETELQTAVETLIQVTQEKEAQMEECKETKALHTSMIEEFETSTSNLKSLLQEEQNRLKKYEEESKLLTLELTNKSAELEEMTKLKCDKEMQLEQLSETLDKAEELLGKKKDLEATVENLQERGKEMENILHIREKETHDLQIQLTSKVEKEQSYIERLTTLNADLEREALKNEQLTVHINTLLLEKEQMDQEKSNIAAELRKLQEIHEGDRKKEENTKQLVDNLEETNSQLRNELESLKEKMAKKGEEIKSKLDESEENVCHTKSIENEISRKERQLKILDNKLNNLKKQVENKTKYIEELQQENKVLKKKMTAESKKTSVYEGKVNKLQLEMENMKNQHKETVDMYKREIEAKRVTENKLLEEVEKMKLLADEATITQREMDIRCQHKITEMMALMEKHKHEYDKMVEEKDTELKLCKIKEQEQLSLKRTLESELSCLKSELSSLKEQLKVEIEEKKTQTHFTETPKPHLDLDCTSINVKKILSQNIPVKVNMTESKKTSPPAPAKSPLGSRLLKTYIVKTPPVHKMQSESTNLLSEQRKKQKVLLQLDAQSDSSEHSDLLSIVSEEEMFKKLYKDYPQASQLYAMTPKKKPTTSNLKAPGSALKLTTVRKMREAGWTAVSKMDRKRKIKEAEKLFT
SIO_010081: SYCP1
subclass of: SO_0000673
so part of: SYCP1
location: complement(join(171332..171475,171562..171648,172005..172142,172610..172786,175096..175170,176088..176180,176951..177061,177702..177818,179026..179088,179957..180019,180360..180422,181104..181194,181876..181946,182171..182288,182893..182996,183987..184091,185082..185143,186323..186390,187476..187660,187793..187887,189284..189392,190388..190461,191482..191551,192657..192715,194015..194088,194272..194339,195169..195333,196653..196699,196856..196940,197929..198036))
location: region:171332-198036:-1
so has part: feature:197929-198036:-1:exon
so has part: feature:196856-196940:-1:exon
so has part: feature:196653-196699:-1:exon
so has part: feature:195169-195333:-1:exon
so has part: feature:194272-194339:-1:exon
so has part: feature:194015-194088:-1:exon
so has part: feature:192657-192715:-1:exon
so has part: feature:191482-191551:-1:exon
so has part: feature:190388-190461:-1:exon
so has part: feature:189284-189392:-1:exon
so has part: feature:187793-187887:-1:exon
so has part: feature:187476-187660:-1:exon
so has part: feature:186323-186390:-1:exon
so has part: feature:185082-185143:-1:exon
so has part: feature:183987-184091:-1:exon
so has part: feature:182893-182996:-1:exon
so has part: feature:182171-182288:-1:exon
so has part: feature:181876-181946:-1:exon
so has part: feature:181104-181194:-1:exon
so has part: feature:180360-180422:-1:exon
so has part: feature:179957-180019:-1:exon
so has part: feature:179026-179088:-1:exon
so has part: feature:177702-177818:-1:exon
so has part: feature:176951-177061:-1:exon
so has part: feature:176088-176180:-1:exon
so has part: feature:175096-175170:-1:exon
so has part: feature:172610-172786:-1:exon
so has part: feature:172005-172142:-1:exon
so has part: feature:171562-171648:-1:exon
so has part: feature:171332-171475:-1:exon

XP_035417453.1
type: Protein
SIO_000068: ncbiprotein

position:171332:-1
position: 171332
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:198036:-1
position: 198036
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:197929-198036:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:196856-196940:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:196653-196699:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:195169-195333:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:194272-194339:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:194015-194088:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:192657-192715:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:191482-191551:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:190388-190461:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:189284-189392:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:187793-187887:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:187476-187660:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:186323-186390:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:185082-185143:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:183987-184091:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:182893-182996:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:182171-182288:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:181876-181946:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:181104-181194:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:180360-180422:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:179957-180019:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:179026-179088:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:177702-177818:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:176951-177061:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:176088-176180:-1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:175096-175170:-1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:172610-172786:-1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:172005-172142:-1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:171562-171648:-1:exon

urn:…
SIO_000300: 30
SIO_000628: feature:171332-171475:-1:exon

LOC118255397
type: Gene
subclass of: SO_0000704
RO_0002162: 8868
gene: LOC118255397
note: bile acid receptor-like; Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(197278..209641)
location: region:197278-209641:-1
so has part: feature:197278-209641:-1:exon
subclass of: SO_0000010

118255397
type: Gene
SIO_000068: ncbigene

position:197278:-1
position: 197278
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:209641:-1
position: 209641
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:197278-209641:-1:exon

LOC118255397
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8868
gene: LOC118255397
product: bile acid receptor-like, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 14 long SRA reads, 6 Proteins
transcript id: XM_035561561.2
SIO_010081: LOC118255397
subclass of: SO_0000673
so part of: LOC118255397
location: complement(join(197278..198513,198641..198754,199157..199273,199784..199912,201070..201169,201267..201371,201462..201601,202502..202642,203207..203572,204857..204983,209480..209615))
location: region:197278-209615:-1
so has part: feature:209480-209615:-1:exon
so has part: feature:204857-204983:-1:exon
so has part: feature:203207-203572:-1:exon
so has part: feature:202502-202642:-1:exon
so has part: feature:201462-201601:-1:exon
so has part: feature:201267-201371:-1:exon
so has part: feature:201070-201169:-1:exon
so has part: feature:199784-199912:-1:exon
so has part: feature:199157-199273:-1:exon
so has part: feature:198641-198754:-1:exon
so has part: feature:197278-198513:-1:exon

position:209615:-1
position: 209615
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:209480-209615:-1:exon

position:209480:-1
position: 209480
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:204857-204983:-1:exon

position:204857:-1
position: 204857
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:204983:-1
position: 204983
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:203207-203572:-1:exon

position:203207:-1
position: 203207
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:203572:-1
position: 203572
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:202502-202642:-1:exon

position:202502:-1
position: 202502
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:202642:-1
position: 202642
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:201462-201601:-1:exon

position:201462:-1
position: 201462
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:201601:-1
position: 201601
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:201267-201371:-1:exon

position:201267:-1
position: 201267
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:201371:-1
position: 201371
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:201070-201169:-1:exon

position:201070:-1
position: 201070
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:201169:-1
position: 201169
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:199784-199912:-1:exon

position:199784:-1
position: 199784
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:199912:-1
position: 199912
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:199157-199273:-1:exon

position:199157:-1
position: 199157
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:199273:-1
position: 199273
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:198641-198754:-1:exon

position:198641:-1
position: 198641
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:198754:-1
position: 198754
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:197278-198513:-1:exon

position:198513:-1
position: 198513
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC118255397
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8868
gene: LOC118255397
product: bile acid receptor-like, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 long SRA reads, 6 Proteins
transcript id: XM_050715383.1
SIO_010081: LOC118255397
subclass of: SO_0000673
so part of: LOC118255397
location: complement(join(198266..198513,198641..198754,199157..199273,199784..199912,201070..201169,201267..201371,201462..201601,202502..202642,203207..203572,204857..204983,206529..206631,209480..209641))
location: region:198266-209641:-1
so has part: feature:209480-209641:-1:exon
so has part: feature:206529-206631:-1:exon
so has part: feature:204857-204983:-1:exon
so has part: feature:203207-203572:-1:exon
so has part: feature:202502-202642:-1:exon
so has part: feature:201462-201601:-1:exon
so has part: feature:201267-201371:-1:exon
so has part: feature:201070-201169:-1:exon
so has part: feature:199784-199912:-1:exon
so has part: feature:199157-199273:-1:exon
so has part: feature:198641-198754:-1:exon
so has part: feature:198266-198513:-1:exon

position:198266:-1
position: 198266
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:209480-209641:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:206529-206631:-1:exon

position:206529:-1
position: 206529
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:206631:-1
position: 206631
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:204857-204983:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:203207-203572:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:202502-202642:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:201462-201601:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:201267-201371:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:201070-201169:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:199784-199912:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:199157-199273:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:198641-198754:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:198266-198513:-1:exon

LOC118255397
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8868
gene: LOC118255397
product: bile acid receptor-like, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 long SRA reads
transcript id: XM_035561565.2
SIO_010081: LOC118255397
subclass of: SO_0000673
so part of: LOC118255397
location: complement(join(198266..198513,198641..198754,199157..199273,201070..201169,201267..201371,201462..201601,202502..202642,203207..203572,204857..204983,206529..206631,209480..209598))
location: region:198266-209598:-1
so has part: feature:209480-209598:-1:exon
so has part: feature:206529-206631:-1:exon
so has part: feature:204857-204983:-1:exon
so has part: feature:203207-203572:-1:exon
so has part: feature:202502-202642:-1:exon
so has part: feature:201462-201601:-1:exon
so has part: feature:201267-201371:-1:exon
so has part: feature:201070-201169:-1:exon
so has part: feature:199157-199273:-1:exon
so has part: feature:198641-198754:-1:exon
so has part: feature:198266-198513:-1:exon

position:209598:-1
position: 209598
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:209480-209598:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:206529-206631:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:204857-204983:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:203207-203572:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:202502-202642:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:201462-201601:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:201267-201371:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:201070-201169:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:199157-199273:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:198641-198754:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:198266-198513:-1:exon

LOC118255397
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8868
gene: LOC118255397
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: bile acid receptor-like isoform X2
translation: MANTFVTVPDGYCLAEPIQYYDVLPEHINYQLQDTDFQTAPYCQYSTVQIPSPVLQSQPSQSQYSTYTLDSQYNDGQYIISNCELSKPPFMASHLDDSGYQGLKRPRLNHSSLRLKGQEELCVVCGDKASGYHYNALTCEGCKGFFRRSITKNAVYRCKNGGHCEMDMYMRRKCQECRLKKCKAVGMLAECLLTEVQCKSKRLRKNFKQKSSFLCNIKLEDEKLNSKHVSSTTRSGKIPEKMELTPGEHQLLDHIVAAHQKYMIPLEEAKKFLQETASPEESFLRLSETAVVHVQVLVDFTKRLPGHIRLPDHATCCHVQNLDKNIYSIEISHNEESPTSTTTTGITEEFITALFYFYRSMGELKVTETEYALLVATTVFFSDRPLLRNKRHVEELQEPLLGILYKYSKIHHPEDPQHFARLIGRLTELRTLNHTHAEVLVTWRTKDPRLTSLLCEVWDLQ
SIO_010081: LOC118255397
subclass of: SO_0000673
so part of: LOC118255397
location: complement(join(198275..198513,198641..198754,199157..199273,201070..201169,201267..201371,201462..201601,202502..202642,203207..203572,204857..204920))
location: region:198275-204920:-1
so has part: feature:204857-204920:-1:exon
so has part: feature:203207-203572:-1:exon
so has part: feature:202502-202642:-1:exon
so has part: feature:201462-201601:-1:exon
so has part: feature:201267-201371:-1:exon
so has part: feature:201070-201169:-1:exon
so has part: feature:199157-199273:-1:exon
so has part: feature:198641-198754:-1:exon
so has part: feature:198275-198513:-1:exon

XP_035417458.1
type: Protein
SIO_000068: ncbiprotein

position:198275:-1
position: 198275
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:204920:-1
position: 204920
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:204857-204920:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:203207-203572:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:202502-202642:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:201462-201601:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:201267-201371:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:201070-201169:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:199157-199273:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:198641-198754:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:198275-198513:-1:exon

LOC118255397
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8868
gene: LOC118255397
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: bile acid receptor-like isoform X1
translation: MANTFVTVPDGYCLAEPIQYYDVLPEHINYQLQDTDFQTAPYCQYSTVQIPSPVLQSQPSQSQYSTYTLDSQYNDGQYIISNCELSKPPFMASHLDDSGYQGLKRPRLNHSSLRLKGQEELCVVCGDKASGYHYNALTCEGCKGFFRRSITKNAVYRCKNGGHCEMDMYMRRKCQECRLKKCKAVGMLAECLLTEVQCKSKRLRKNFKQKSSFLCNIKLEDEKLNSKHVSSTTRSGKIPEKMELTPGEHQLLDHIVAAHQKYMIPLEEAKKFLQETASPEESFLRLSETAVVHVQVLVDFTKRLPGFESLASEDQIALLKGSTVEAMFLRSAQIYNQRISECQSSTSESHIRLPDHATCCHVQNLDKNIYSIEISHNEESPTSTTTTGITEEFITALFYFYRSMGELKVTETEYALLVATTVFFSDRPLLRNKRHVEELQEPLLGILYKYSKIHHPEDPQHFARLIGRLTELRTLNHTHAEVLVTWRTKDPRLTSLLCEVWDLQ
SIO_010081: LOC118255397
subclass of: SO_0000673
so part of: LOC118255397
location: complement(join(198275..198513,198641..198754,199157..199273,199784..199912,201070..201169,201267..201371,201462..201601,202502..202642,203207..203572,204857..204920))
location: region:198275-204920:-1
so has part: feature:204857-204920:-1:exon
so has part: feature:203207-203572:-1:exon
so has part: feature:202502-202642:-1:exon
so has part: feature:201462-201601:-1:exon
so has part: feature:201267-201371:-1:exon
so has part: feature:201070-201169:-1:exon
so has part: feature:199784-199912:-1:exon
so has part: feature:199157-199273:-1:exon
so has part: feature:198641-198754:-1:exon
so has part: feature:198275-198513:-1:exon

XP_035417454.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:204857-204920:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:203207-203572:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:202502-202642:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:201462-201601:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:201267-201371:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:201070-201169:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:199784-199912:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:199157-199273:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:198641-198754:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:198275-198513:-1:exon

LOC118255397
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8868
gene: LOC118255397
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: bile acid receptor-like isoform X1
translation: MANTFVTVPDGYCLAEPIQYYDVLPEHINYQLQDTDFQTAPYCQYSTVQIPSPVLQSQPSQSQYSTYTLDSQYNDGQYIISNCELSKPPFMASHLDDSGYQGLKRPRLNHSSLRLKGQEELCVVCGDKASGYHYNALTCEGCKGFFRRSITKNAVYRCKNGGHCEMDMYMRRKCQECRLKKCKAVGMLAECLLTEVQCKSKRLRKNFKQKSSFLCNIKLEDEKLNSKHVSSTTRSGKIPEKMELTPGEHQLLDHIVAAHQKYMIPLEEAKKFLQETASPEESFLRLSETAVVHVQVLVDFTKRLPGFESLASEDQIALLKGSTVEAMFLRSAQIYNQRISECQSSTSESHIRLPDHATCCHVQNLDKNIYSIEISHNEESPTSTTTTGITEEFITALFYFYRSMGELKVTETEYALLVATTVFFSDRPLLRNKRHVEELQEPLLGILYKYSKIHHPEDPQHFARLIGRLTELRTLNHTHAEVLVTWRTKDPRLTSLLCEVWDLQ
SIO_010081: LOC118255397
subclass of: SO_0000673
so part of: LOC118255397
location: complement(join(198275..198513,198641..198754,199157..199273,199784..199912,201070..201169,201267..201371,201462..201601,202502..202642,203207..203572,204857..204920))
location: region:198275-204920:-1
so has part: feature:204857-204920:-1:exon
so has part: feature:203207-203572:-1:exon
so has part: feature:202502-202642:-1:exon
so has part: feature:201462-201601:-1:exon
so has part: feature:201267-201371:-1:exon
so has part: feature:201070-201169:-1:exon
so has part: feature:199784-199912:-1:exon
so has part: feature:199157-199273:-1:exon
so has part: feature:198641-198754:-1:exon
so has part: feature:198275-198513:-1:exon

XP_050571340.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:204857-204920:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:203207-203572:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:202502-202642:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:201462-201601:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:201267-201371:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:201070-201169:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:199784-199912:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:199157-199273:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:198641-198754:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:198275-198513:-1:exon

SIKE1
type: Gene
subclass of: SO_0000704
RO_0002162: 8868
gene: SIKE1
note: suppressor of IKBKE 1; Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 218740..223155
location: region:218740-223155:1
so has part: feature:218740-223155:1:exon
subclass of: SO_0000010

118255446
type: Gene
SIO_000068: ncbigene

position:218740:1
position: 218740
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:223155:1
position: 223155
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:218740-223155:1:exon

SIKE1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8868
gene: SIKE1
product: suppressor of IKBKE 1, transcript variant X2
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_035561636.2
SIO_010081: SIKE1
subclass of: SO_0000673
so part of: SIKE1
location: join(218740..219176,219438..219580,221240..221353,221695..223155)
location: region:218740-223155:1
so has part: feature:218740-219176:1:exon
so has part: feature:219438-219580:1:exon
so has part: feature:221240-221353:1:exon
so has part: feature:221695-223155:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:218740-219176:1:exon

position:219176:1
position: 219176
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:219438-219580:1:exon

position:219438:1
position: 219438
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:219580:1
position: 219580
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:221240-221353:1:exon

position:221240:1
position: 221240
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:221353:1
position: 221353
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:221695-223155:1:exon

position:221695:1
position: 221695
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

SIKE1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8868
gene: SIKE1
product: suppressor of IKBKE 1, transcript variant X1
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_035561635.2
SIO_010081: SIKE1
subclass of: SO_0000673
so part of: SIKE1
location: join(218744..219176,219438..219580,221240..221353,221715..223155)
location: region:218744-223155:1
so has part: feature:218744-219176:1:exon
so has part: feature:219438-219580:1:exon
so has part: feature:221240-221353:1:exon
so has part: feature:221715-223155:1:exon

position:218744:1
position: 218744
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:218744-219176:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:219438-219580:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:221240-221353:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:221715-223155:1:exon

position:221715:1
position: 221715
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

SIKE1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8868
gene: SIKE1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: suppressor of IKBKE 1 isoform X1
translation: MTCTIEKILTDAKTLLERLKEHDTAAESLIDQSAVLHQRVAAMREAGAAPAEKVSAAGGAAGPTAAARPGRGAPADRADASRLRPHALLSQENTQIRDLRRENRALWISLEEHQDALELIMSKYRKQMLQLMQGRKGEDAEPVLKVHQANSVEIESQIDRICEMGEVMRKAIQVDDDQFFKVREKLAQLELENKELRELLSISKESFEVGREDLPDSEA
SIO_010081: SIKE1
subclass of: SO_0000673
so part of: SIKE1
location: join(218864..219176,219438..219580,221240..221353,221715..221804)
location: region:218864-221804:1
so has part: feature:218864-219176:1:exon
so has part: feature:219438-219580:1:exon
so has part: feature:221240-221353:1:exon
so has part: feature:221715-221804:1:exon

XP_035417528.1
type: Protein
SIO_000068: ncbiprotein

position:218864:1
position: 218864
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:221804:1
position: 221804
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:218864-219176:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:219438-219580:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:221240-221353:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:221715-221804:1:exon

SIKE1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8868
gene: SIKE1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: suppressor of IKBKE 1 isoform X2
translation: MTCTIEKILTDAKTLLERLKEHDTAAESLIDQSAVLHQRVAAMREAGAAPAEKVSAAGGAAGPTAAARPGRGAPADRADASRLRPHALLSQENTQIRDLRRENRALWISLEEHQDALELIMSKYRKQMLQLMQGRKGEDAEPVLKVHQANSVEIESQIDRICEMGEVMRKAIQVDDDQFFKVREKLAQLEQKY
SIO_010081: SIKE1
subclass of: SO_0000673
so part of: SIKE1
location: join(218864..219176,219438..219580,221240..221353,221695..221706)
location: region:218864-221706:1
so has part: feature:218864-219176:1:exon
so has part: feature:219438-219580:1:exon
so has part: feature:221240-221353:1:exon
so has part: feature:221695-221706:1:exon

XP_035417529.1
type: Protein
SIO_000068: ncbiprotein

position:221706:1
position: 221706
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:218864-219176:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:219438-219580:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:221240-221353:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:221695-221706:1:exon

CSDE1
type: Gene
subclass of: SO_0000704
RO_0002162: 8868
gene: CSDE1
note: cold shock domain containing E1; Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 224056..245145
location: region:224056-245145:1
so has part: feature:224056-245145:1:exon
subclass of: SO_0000010

118255447
type: Gene
SIO_000068: ncbigene

position:224056:1
position: 224056
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:245145:1
position: 245145
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:224056-245145:1:exon

CSDE1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8868
gene: CSDE1
product: cold shock domain containing E1, transcript variant X2
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_035561637.1
SIO_010081: CSDE1
subclass of: SO_0000673
so part of: CSDE1
location: join(224056..224197,227952..228350,232083..232281,232935..233044,233409..233501,234044..234141,234295..234376,234727..234855,235028..235153,236172..236384,237335..237475,237564..237722,238328..238435,239292..239467,239810..239922,240445..240564,240822..241000,242083..242246,243229..243361,243836..245145)
location: region:224056-245145:1
so has part: feature:224056-224197:1:exon
so has part: feature:227952-228350:1:exon
so has part: feature:232083-232281:1:exon
so has part: feature:232935-233044:1:exon
so has part: feature:233409-233501:1:exon
so has part: feature:234044-234141:1:exon
so has part: feature:234295-234376:1:exon
so has part: feature:234727-234855:1:exon
so has part: feature:235028-235153:1:exon
so has part: feature:236172-236384:1:exon
so has part: feature:237335-237475:1:exon
so has part: feature:237564-237722:1:exon
so has part: feature:238328-238435:1:exon
so has part: feature:239292-239467:1:exon
so has part: feature:239810-239922:1:exon
so has part: feature:240445-240564:1:exon
so has part: feature:240822-241000:1:exon
so has part: feature:242083-242246:1:exon
so has part: feature:243229-243361:1:exon
so has part: feature:243836-245145:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:224056-224197:1:exon

position:224197:1
position: 224197
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:227952-228350:1:exon

position:227952:1
position: 227952
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:228350:1
position: 228350
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:232083-232281:1:exon

position:232083:1
position: 232083
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:232281:1
position: 232281
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:232935-233044:1:exon

position:232935:1
position: 232935
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:233044:1
position: 233044
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:233409-233501:1:exon

position:233409:1
position: 233409
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:233501:1
position: 233501
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:234044-234141:1:exon

position:234044:1
position: 234044
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:234141:1
position: 234141
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:234295-234376:1:exon

position:234295:1
position: 234295
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:234376:1
position: 234376
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:234727-234855:1:exon

position:234727:1
position: 234727
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:234855:1
position: 234855
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:235028-235153:1:exon

position:235028:1
position: 235028
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:235153:1
position: 235153
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:236172-236384:1:exon

position:236172:1
position: 236172
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:236384:1
position: 236384
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:237335-237475:1:exon

position:237335:1
position: 237335
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:237475:1
position: 237475
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:237564-237722:1:exon

position:237564:1
position: 237564
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:237722:1
position: 237722
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:238328-238435:1:exon

position:238328:1
position: 238328
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:238435:1
position: 238435
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:239292-239467:1:exon

position:239292:1
position: 239292
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:239467:1
position: 239467
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:239810-239922:1:exon

position:239810:1
position: 239810
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:239922:1
position: 239922
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:240445-240564:1:exon

position:240445:1
position: 240445
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:240564:1
position: 240564
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:240822-241000:1:exon

position:240822:1
position: 240822
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:241000:1
position: 241000
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:242083-242246:1:exon

position:242083:1
position: 242083
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:242246:1
position: 242246
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:243229-243361:1:exon

position:243229:1
position: 243229
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:243361:1
position: 243361
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:243836-245145:1:exon

position:243836:1
position: 243836
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

CSDE1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8868
gene: CSDE1
product: cold shock domain containing E1, transcript variant X6
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_050715410.1
SIO_010081: CSDE1
subclass of: SO_0000673
so part of: CSDE1
location: join(224079..224197,227952..228350,232083..232281,232935..233044,234044..234141,234295..234376,234727..234855,235028..235153,236172..236384,237335..237475,237564..237722,238328..238435,239292..239467,239810..239922,240445..240564,240822..241000,242083..242246,243229..243361,243836..245145)
location: region:224079-245145:1
so has part: feature:224079-224197:1:exon
so has part: feature:227952-228350:1:exon
so has part: feature:232083-232281:1:exon
so has part: feature:232935-233044:1:exon
so has part: feature:234044-234141:1:exon
so has part: feature:234295-234376:1:exon
so has part: feature:234727-234855:1:exon
so has part: feature:235028-235153:1:exon
so has part: feature:236172-236384:1:exon
so has part: feature:237335-237475:1:exon
so has part: feature:237564-237722:1:exon
so has part: feature:238328-238435:1:exon
so has part: feature:239292-239467:1:exon
so has part: feature:239810-239922:1:exon
so has part: feature:240445-240564:1:exon
so has part: feature:240822-241000:1:exon
so has part: feature:242083-242246:1:exon
so has part: feature:243229-243361:1:exon
so has part: feature:243836-245145:1:exon

position:224079:1
position: 224079
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:224079-224197:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:227952-228350:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:232083-232281:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:232935-233044:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:234044-234141:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:234295-234376:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:234727-234855:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:235028-235153:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:236172-236384:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:237335-237475:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:237564-237722:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:238328-238435:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:239292-239467:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:239810-239922:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:240445-240564:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:240822-241000:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:242083-242246:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:243229-243361:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:243836-245145:1:exon

CSDE1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8868
gene: CSDE1
product: cold shock domain containing E1, transcript variant X4
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_050715408.1
SIO_010081: CSDE1
subclass of: SO_0000673
so part of: CSDE1
location: join(224099..224197,227952..228350,232083..232281,232935..233044,233409..233501,234044..234141,234295..234376,234727..234855,235028..235153,236172..236384,237335..237475,237564..237722,238328..238435,239292..239467,239810..239922,240445..240564,240822..241000,242083..242246,243229..243361,243836..243904,244729..245145)
location: region:224099-245145:1
so has part: feature:224099-224197:1:exon
so has part: feature:227952-228350:1:exon
so has part: feature:232083-232281:1:exon
so has part: feature:232935-233044:1:exon
so has part: feature:233409-233501:1:exon
so has part: feature:234044-234141:1:exon
so has part: feature:234295-234376:1:exon
so has part: feature:234727-234855:1:exon
so has part: feature:235028-235153:1:exon
so has part: feature:236172-236384:1:exon
so has part: feature:237335-237475:1:exon
so has part: feature:237564-237722:1:exon
so has part: feature:238328-238435:1:exon
so has part: feature:239292-239467:1:exon
so has part: feature:239810-239922:1:exon
so has part: feature:240445-240564:1:exon
so has part: feature:240822-241000:1:exon
so has part: feature:242083-242246:1:exon
so has part: feature:243229-243361:1:exon
so has part: feature:243836-243904:1:exon
so has part: feature:244729-245145:1:exon

position:224099:1
position: 224099
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:224099-224197:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:227952-228350:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:232083-232281:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:232935-233044:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:233409-233501:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:234044-234141:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:234295-234376:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:234727-234855:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:235028-235153:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:236172-236384:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:237335-237475:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:237564-237722:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:238328-238435:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:239292-239467:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:239810-239922:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:240445-240564:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:240822-241000:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:242083-242246:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:243229-243361:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:243836-243904:1:exon

position:243904:1
position: 243904
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:244729-245145:1:exon

position:244729:1
position: 244729
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

CSDE1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8868
gene: CSDE1
product: cold shock domain containing E1, transcript variant X5
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_050715409.1
SIO_010081: CSDE1
subclass of: SO_0000673
so part of: CSDE1
location: join(224112..224197,227952..228350,232083..232281,232935..233044,234044..234141,234295..234376,234727..234855,235028..235153,236172..236384,237335..237475,237564..237722,238328..238435,239292..239467,239810..239922,240445..240564,240822..241000,242083..242246,243229..243361,243836..243904,244729..245145)
location: region:224112-245145:1
so has part: feature:224112-224197:1:exon
so has part: feature:227952-228350:1:exon
so has part: feature:232083-232281:1:exon
so has part: feature:232935-233044:1:exon
so has part: feature:234044-234141:1:exon
so has part: feature:234295-234376:1:exon
so has part: feature:234727-234855:1:exon
so has part: feature:235028-235153:1:exon
so has part: feature:236172-236384:1:exon
so has part: feature:237335-237475:1:exon
so has part: feature:237564-237722:1:exon
so has part: feature:238328-238435:1:exon
so has part: feature:239292-239467:1:exon
so has part: feature:239810-239922:1:exon
so has part: feature:240445-240564:1:exon
so has part: feature:240822-241000:1:exon
so has part: feature:242083-242246:1:exon
so has part: feature:243229-243361:1:exon
so has part: feature:243836-243904:1:exon
so has part: feature:244729-245145:1:exon

position:224112:1
position: 224112
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:224112-224197:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:227952-228350:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:232083-232281:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:232935-233044:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:234044-234141:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:234295-234376:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:234727-234855:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:235028-235153:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:236172-236384:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:237335-237475:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:237564-237722:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:238328-238435:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:239292-239467:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:239810-239922:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:240445-240564:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:240822-241000:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:242083-242246:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:243229-243361:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:243836-243904:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:244729-245145:1:exon

CSDE1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8868
gene: CSDE1
product: cold shock domain containing E1, transcript variant X3
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_035561639.2
SIO_010081: CSDE1
subclass of: SO_0000673
so part of: CSDE1
location: join(226280..226385,227952..228350,232083..232281,232935..233044,233409..233501,234044..234141,234295..234376,234727..234855,235028..235153,236172..236384,237335..237475,237564..237722,238328..238435,239292..239467,239810..239922,240445..240564,240822..241000,242083..242246,243229..243361,243836..245145)
location: region:226280-245145:1
so has part: feature:226280-226385:1:exon
so has part: feature:227952-228350:1:exon
so has part: feature:232083-232281:1:exon
so has part: feature:232935-233044:1:exon
so has part: feature:233409-233501:1:exon
so has part: feature:234044-234141:1:exon
so has part: feature:234295-234376:1:exon
so has part: feature:234727-234855:1:exon
so has part: feature:235028-235153:1:exon
so has part: feature:236172-236384:1:exon
so has part: feature:237335-237475:1:exon
so has part: feature:237564-237722:1:exon
so has part: feature:238328-238435:1:exon
so has part: feature:239292-239467:1:exon
so has part: feature:239810-239922:1:exon
so has part: feature:240445-240564:1:exon
so has part: feature:240822-241000:1:exon
so has part: feature:242083-242246:1:exon
so has part: feature:243229-243361:1:exon
so has part: feature:243836-245145:1:exon

position:226280:1
position: 226280
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:226280-226385:1:exon

position:226385:1
position: 226385
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:227952-228350:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:232083-232281:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:232935-233044:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:233409-233501:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:234044-234141:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:234295-234376:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:234727-234855:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:235028-235153:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:236172-236384:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:237335-237475:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:237564-237722:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:238328-238435:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:239292-239467:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:239810-239922:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:240445-240564:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:240822-241000:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:242083-242246:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:243229-243361:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:243836-245145:1:exon

CSDE1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8868
gene: CSDE1
product: cold shock domain containing E1, transcript variant X1
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_050715407.1
SIO_010081: CSDE1
subclass of: SO_0000673
so part of: CSDE1
location: join(231262..231452,232083..232281,232935..233044,233409..233501,234044..234141,234295..234376,234727..234855,235028..235153,236172..236384,237335..237475,237564..237722,238328..238435,239292..239467,239810..239922,240445..240564,240822..241000,242083..242246,243229..243361,243836..245145)
location: region:231262-245145:1
so has part: feature:231262-231452:1:exon
so has part: feature:232083-232281:1:exon
so has part: feature:232935-233044:1:exon
so has part: feature:233409-233501:1:exon
so has part: feature:234044-234141:1:exon
so has part: feature:234295-234376:1:exon
so has part: feature:234727-234855:1:exon
so has part: feature:235028-235153:1:exon
so has part: feature:236172-236384:1:exon
so has part: feature:237335-237475:1:exon
so has part: feature:237564-237722:1:exon
so has part: feature:238328-238435:1:exon
so has part: feature:239292-239467:1:exon
so has part: feature:239810-239922:1:exon
so has part: feature:240445-240564:1:exon
so has part: feature:240822-241000:1:exon
so has part: feature:242083-242246:1:exon
so has part: feature:243229-243361:1:exon
so has part: feature:243836-245145:1:exon

position:231262:1
position: 231262
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:231262-231452:1:exon

position:231452:1
position: 231452
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:232083-232281:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:232935-233044:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:233409-233501:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:234044-234141:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:234295-234376:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:234727-234855:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:235028-235153:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:236172-236384:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:237335-237475:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:237564-237722:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:238328-238435:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:239292-239467:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:239810-239922:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:240445-240564:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:240822-241000:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:242083-242246:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:243229-243361:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:243836-245145:1:exon

CSDE1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8868
gene: CSDE1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: cold shock domain-containing protein E1 isoform X1
translation: MDMSFDPNLLHNNGHNGYPNGTSAALRETGVIEKLLTSYGFIQCSERQARLFFHCSQYNGNLQELKVGDDVEFEVSSDRRTGKPIAVKLVKIKPEILPEERINGQVVCAVPHNLESKSPAAPGQSPTGSVCYERNGEVFYLTYTPEDVEGNIQLETGDKINFVIDTNKHTGAVSARNIMLLKKKQARCQGVVCAMKEAFGFIERGDVVKEIFFHYSEFKGDLEALQPGDDVEFTIKDRNGKEVATDVRLLPQGTVIFEDISIEHFEGTVTKVIPKVPSKNQNDPLPGRIKVDFVIPKELPFGDKDTKSKVTLLESDHVRFNISTDRRDKLERATNIEVLPNTFQFTNETREMGVIAAMRDGFGFIKCVDRDARMFFHFSEIMDGNQLHISDEVEFTVVPDMLSAQRNHAIRIKKLPKGTVSFHTQSDHRFVGTIDKEATPAKATSPNKGKEKEAEDGIIVYDDCGVKLTIPYQAKDVEGSANPQIGDKVEFSVCEVKRTGLQTAVSVRMLGRNYSSKRLLGYVAALKDNFGFIETANHDKEIFFHYSEYCGDIDSLELGDTVEYSLSKGKGNKVSAEKVNKTHAVNGITEEADPTVYSGKVIRPLRSVDPTQTEYQGMIEVMEDGEMKGEFYPFGIVGMANKGDCLQKGETVKFQLCVLGQNGQTMAVNITPFRRATVECVKDQFGFINYEVGDSKKLFFHVKEVQDGVELQAGDEVEFSVILNQRTGKCSACNVWRVCEGAKAVAAPRPDRLVNRLKSINLDDANAPRLTVLRQPRGPDNSKGFGAERKIRQAGVID
SIO_010081: CSDE1
subclass of: SO_0000673
so part of: CSDE1
location: join(231447..231452,232083..232281,232935..233044,233409..233501,234044..234141,234295..234376,234727..234855,235028..235153,236172..236384,237335..237475,237564..237722,238328..238435,239292..239467,239810..239922,240445..240564,240822..241000,242083..242246,243229..243361,243836..243883)
location: region:231447-243883:1
so has part: feature:231447-231452:1:exon
so has part: feature:232083-232281:1:exon
so has part: feature:232935-233044:1:exon
so has part: feature:233409-233501:1:exon
so has part: feature:234044-234141:1:exon
so has part: feature:234295-234376:1:exon
so has part: feature:234727-234855:1:exon
so has part: feature:235028-235153:1:exon
so has part: feature:236172-236384:1:exon
so has part: feature:237335-237475:1:exon
so has part: feature:237564-237722:1:exon
so has part: feature:238328-238435:1:exon
so has part: feature:239292-239467:1:exon
so has part: feature:239810-239922:1:exon
so has part: feature:240445-240564:1:exon
so has part: feature:240822-241000:1:exon
so has part: feature:242083-242246:1:exon
so has part: feature:243229-243361:1:exon
so has part: feature:243836-243883:1:exon

XP_050571364.1
type: Protein
SIO_000068: ncbiprotein

position:231447:1
position: 231447
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:243883:1
position: 243883
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:231447-231452:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:232083-232281:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:232935-233044:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:233409-233501:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:234044-234141:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:234295-234376:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:234727-234855:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:235028-235153:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:236172-236384:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:237335-237475:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:237564-237722:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:238328-238435:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:239292-239467:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:239810-239922:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:240445-240564:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:240822-241000:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:242083-242246:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:243229-243361:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:243836-243883:1:exon

CSDE1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8868
gene: CSDE1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: cold shock domain-containing protein E1 isoform X2
translation: MSFDPNLLHNNGHNGYPNGTSAALRETGVIEKLLTSYGFIQCSERQARLFFHCSQYNGNLQELKVGDDVEFEVSSDRRTGKPIAVKLVKIKPEILPEERINGQVVCAVPHNLESKSPAAPGQSPTGSVCYERNGEVFYLTYTPEDVEGNIQLETGDKINFVIDTNKHTGAVSARNIMLLKKKQARCQGVVCAMKEAFGFIERGDVVKEIFFHYSEFKGDLEALQPGDDVEFTIKDRNGKEVATDVRLLPQGTVIFEDISIEHFEGTVTKVIPKVPSKNQNDPLPGRIKVDFVIPKELPFGDKDTKSKVTLLESDHVRFNISTDRRDKLERATNIEVLPNTFQFTNETREMGVIAAMRDGFGFIKCVDRDARMFFHFSEIMDGNQLHISDEVEFTVVPDMLSAQRNHAIRIKKLPKGTVSFHTQSDHRFVGTIDKEATPAKATSPNKGKEKEAEDGIIVYDDCGVKLTIPYQAKDVEGSANPQIGDKVEFSVCEVKRTGLQTAVSVRMLGRNYSSKRLLGYVAALKDNFGFIETANHDKEIFFHYSEYCGDIDSLELGDTVEYSLSKGKGNKVSAEKVNKTHAVNGITEEADPTVYSGKVIRPLRSVDPTQTEYQGMIEVMEDGEMKGEFYPFGIVGMANKGDCLQKGETVKFQLCVLGQNGQTMAVNITPFRRATVECVKDQFGFINYEVGDSKKLFFHVKEVQDGVELQAGDEVEFSVILNQRTGKCSACNVWRVCEGAKAVAAPRPDRLVNRLKSINLDDANAPRLTVLRQPRGPDNSKGFGAERKIRQAGVID
SIO_010081: CSDE1
subclass of: SO_0000673
so part of: CSDE1
location: join(232083..232281,232935..233044,233409..233501,234044..234141,234295..234376,234727..234855,235028..235153,236172..236384,237335..237475,237564..237722,238328..238435,239292..239467,239810..239922,240445..240564,240822..241000,242083..242246,243229..243361,243836..243883)
location: region:232083-243883:1
so has part: feature:232083-232281:1:exon
so has part: feature:232935-233044:1:exon
so has part: feature:233409-233501:1:exon
so has part: feature:234044-234141:1:exon
so has part: feature:234295-234376:1:exon
so has part: feature:234727-234855:1:exon
so has part: feature:235028-235153:1:exon
so has part: feature:236172-236384:1:exon
so has part: feature:237335-237475:1:exon
so has part: feature:237564-237722:1:exon
so has part: feature:238328-238435:1:exon
so has part: feature:239292-239467:1:exon
so has part: feature:239810-239922:1:exon
so has part: feature:240445-240564:1:exon
so has part: feature:240822-241000:1:exon
so has part: feature:242083-242246:1:exon
so has part: feature:243229-243361:1:exon
so has part: feature:243836-243883:1:exon

XP_035417530.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:232083-232281:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:232935-233044:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:233409-233501:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:234044-234141:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:234295-234376:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:234727-234855:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:235028-235153:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:236172-236384:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:237335-237475:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:237564-237722:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:238328-238435:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:239292-239467:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:239810-239922:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:240445-240564:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:240822-241000:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:242083-242246:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:243229-243361:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:243836-243883:1:exon

CSDE1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8868
gene: CSDE1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: cold shock domain-containing protein E1 isoform X2
translation: MSFDPNLLHNNGHNGYPNGTSAALRETGVIEKLLTSYGFIQCSERQARLFFHCSQYNGNLQELKVGDDVEFEVSSDRRTGKPIAVKLVKIKPEILPEERINGQVVCAVPHNLESKSPAAPGQSPTGSVCYERNGEVFYLTYTPEDVEGNIQLETGDKINFVIDTNKHTGAVSARNIMLLKKKQARCQGVVCAMKEAFGFIERGDVVKEIFFHYSEFKGDLEALQPGDDVEFTIKDRNGKEVATDVRLLPQGTVIFEDISIEHFEGTVTKVIPKVPSKNQNDPLPGRIKVDFVIPKELPFGDKDTKSKVTLLESDHVRFNISTDRRDKLERATNIEVLPNTFQFTNETREMGVIAAMRDGFGFIKCVDRDARMFFHFSEIMDGNQLHISDEVEFTVVPDMLSAQRNHAIRIKKLPKGTVSFHTQSDHRFVGTIDKEATPAKATSPNKGKEKEAEDGIIVYDDCGVKLTIPYQAKDVEGSANPQIGDKVEFSVCEVKRTGLQTAVSVRMLGRNYSSKRLLGYVAALKDNFGFIETANHDKEIFFHYSEYCGDIDSLELGDTVEYSLSKGKGNKVSAEKVNKTHAVNGITEEADPTVYSGKVIRPLRSVDPTQTEYQGMIEVMEDGEMKGEFYPFGIVGMANKGDCLQKGETVKFQLCVLGQNGQTMAVNITPFRRATVECVKDQFGFINYEVGDSKKLFFHVKEVQDGVELQAGDEVEFSVILNQRTGKCSACNVWRVCEGAKAVAAPRPDRLVNRLKSINLDDANAPRLTVLRQPRGPDNSKGFGAERKIRQAGVID
SIO_010081: CSDE1
subclass of: SO_0000673
so part of: CSDE1
location: join(232083..232281,232935..233044,233409..233501,234044..234141,234295..234376,234727..234855,235028..235153,236172..236384,237335..237475,237564..237722,238328..238435,239292..239467,239810..239922,240445..240564,240822..241000,242083..242246,243229..243361,243836..243883)
location: region:232083-243883:1
so has part: feature:232083-232281:1:exon
so has part: feature:232935-233044:1:exon
so has part: feature:233409-233501:1:exon
so has part: feature:234044-234141:1:exon
so has part: feature:234295-234376:1:exon
so has part: feature:234727-234855:1:exon
so has part: feature:235028-235153:1:exon
so has part: feature:236172-236384:1:exon
so has part: feature:237335-237475:1:exon
so has part: feature:237564-237722:1:exon
so has part: feature:238328-238435:1:exon
so has part: feature:239292-239467:1:exon
so has part: feature:239810-239922:1:exon
so has part: feature:240445-240564:1:exon
so has part: feature:240822-241000:1:exon
so has part: feature:242083-242246:1:exon
so has part: feature:243229-243361:1:exon
so has part: feature:243836-243883:1:exon

XP_035417532.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:232083-232281:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:232935-233044:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:233409-233501:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:234044-234141:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:234295-234376:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:234727-234855:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:235028-235153:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:236172-236384:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:237335-237475:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:237564-237722:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:238328-238435:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:239292-239467:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:239810-239922:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:240445-240564:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:240822-241000:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:242083-242246:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:243229-243361:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:243836-243883:1:exon

CSDE1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8868
gene: CSDE1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: cold shock domain-containing protein E1 isoform X2
translation: MSFDPNLLHNNGHNGYPNGTSAALRETGVIEKLLTSYGFIQCSERQARLFFHCSQYNGNLQELKVGDDVEFEVSSDRRTGKPIAVKLVKIKPEILPEERINGQVVCAVPHNLESKSPAAPGQSPTGSVCYERNGEVFYLTYTPEDVEGNIQLETGDKINFVIDTNKHTGAVSARNIMLLKKKQARCQGVVCAMKEAFGFIERGDVVKEIFFHYSEFKGDLEALQPGDDVEFTIKDRNGKEVATDVRLLPQGTVIFEDISIEHFEGTVTKVIPKVPSKNQNDPLPGRIKVDFVIPKELPFGDKDTKSKVTLLESDHVRFNISTDRRDKLERATNIEVLPNTFQFTNETREMGVIAAMRDGFGFIKCVDRDARMFFHFSEIMDGNQLHISDEVEFTVVPDMLSAQRNHAIRIKKLPKGTVSFHTQSDHRFVGTIDKEATPAKATSPNKGKEKEAEDGIIVYDDCGVKLTIPYQAKDVEGSANPQIGDKVEFSVCEVKRTGLQTAVSVRMLGRNYSSKRLLGYVAALKDNFGFIETANHDKEIFFHYSEYCGDIDSLELGDTVEYSLSKGKGNKVSAEKVNKTHAVNGITEEADPTVYSGKVIRPLRSVDPTQTEYQGMIEVMEDGEMKGEFYPFGIVGMANKGDCLQKGETVKFQLCVLGQNGQTMAVNITPFRRATVECVKDQFGFINYEVGDSKKLFFHVKEVQDGVELQAGDEVEFSVILNQRTGKCSACNVWRVCEGAKAVAAPRPDRLVNRLKSINLDDANAPRLTVLRQPRGPDNSKGFGAERKIRQAGVID
SIO_010081: CSDE1
subclass of: SO_0000673
so part of: CSDE1
location: join(232083..232281,232935..233044,233409..233501,234044..234141,234295..234376,234727..234855,235028..235153,236172..236384,237335..237475,237564..237722,238328..238435,239292..239467,239810..239922,240445..240564,240822..241000,242083..242246,243229..243361,243836..243883)
location: region:232083-243883:1
so has part: feature:232083-232281:1:exon
so has part: feature:232935-233044:1:exon
so has part: feature:233409-233501:1:exon
so has part: feature:234044-234141:1:exon
so has part: feature:234295-234376:1:exon
so has part: feature:234727-234855:1:exon
so has part: feature:235028-235153:1:exon
so has part: feature:236172-236384:1:exon
so has part: feature:237335-237475:1:exon
so has part: feature:237564-237722:1:exon
so has part: feature:238328-238435:1:exon
so has part: feature:239292-239467:1:exon
so has part: feature:239810-239922:1:exon
so has part: feature:240445-240564:1:exon
so has part: feature:240822-241000:1:exon
so has part: feature:242083-242246:1:exon
so has part: feature:243229-243361:1:exon
so has part: feature:243836-243883:1:exon

XP_050571365.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:232083-232281:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:232935-233044:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:233409-233501:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:234044-234141:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:234295-234376:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:234727-234855:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:235028-235153:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:236172-236384:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:237335-237475:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:237564-237722:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:238328-238435:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:239292-239467:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:239810-239922:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:240445-240564:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:240822-241000:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:242083-242246:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:243229-243361:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:243836-243883:1:exon

CSDE1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8868
gene: CSDE1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: cold shock domain-containing protein E1 isoform X3
translation: MSFDPNLLHNNGHNGYPNGTSAALRETGVIEKLLTSYGFIQCSERQARLFFHCSQYNGNLQELKVGDDVEFEVSSDRRTGKPIAVKLVKIKPEILPEERINGQEVFYLTYTPEDVEGNIQLETGDKINFVIDTNKHTGAVSARNIMLLKKKQARCQGVVCAMKEAFGFIERGDVVKEIFFHYSEFKGDLEALQPGDDVEFTIKDRNGKEVATDVRLLPQGTVIFEDISIEHFEGTVTKVIPKVPSKNQNDPLPGRIKVDFVIPKELPFGDKDTKSKVTLLESDHVRFNISTDRRDKLERATNIEVLPNTFQFTNETREMGVIAAMRDGFGFIKCVDRDARMFFHFSEIMDGNQLHISDEVEFTVVPDMLSAQRNHAIRIKKLPKGTVSFHTQSDHRFVGTIDKEATPAKATSPNKGKEKEAEDGIIVYDDCGVKLTIPYQAKDVEGSANPQIGDKVEFSVCEVKRTGLQTAVSVRMLGRNYSSKRLLGYVAALKDNFGFIETANHDKEIFFHYSEYCGDIDSLELGDTVEYSLSKGKGNKVSAEKVNKTHAVNGITEEADPTVYSGKVIRPLRSVDPTQTEYQGMIEVMEDGEMKGEFYPFGIVGMANKGDCLQKGETVKFQLCVLGQNGQTMAVNITPFRRATVECVKDQFGFINYEVGDSKKLFFHVKEVQDGVELQAGDEVEFSVILNQRTGKCSACNVWRVCEGAKAVAAPRPDRLVNRLKSINLDDANAPRLTVLRQPRGPDNSKGFGAERKIRQAGVID
SIO_010081: CSDE1
subclass of: SO_0000673
so part of: CSDE1
location: join(232083..232281,232935..233044,234044..234141,234295..234376,234727..234855,235028..235153,236172..236384,237335..237475,237564..237722,238328..238435,239292..239467,239810..239922,240445..240564,240822..241000,242083..242246,243229..243361,243836..243883)
location: region:232083-243883:1
so has part: feature:232083-232281:1:exon
so has part: feature:232935-233044:1:exon
so has part: feature:234044-234141:1:exon
so has part: feature:234295-234376:1:exon
so has part: feature:234727-234855:1:exon
so has part: feature:235028-235153:1:exon
so has part: feature:236172-236384:1:exon
so has part: feature:237335-237475:1:exon
so has part: feature:237564-237722:1:exon
so has part: feature:238328-238435:1:exon
so has part: feature:239292-239467:1:exon
so has part: feature:239810-239922:1:exon
so has part: feature:240445-240564:1:exon
so has part: feature:240822-241000:1:exon
so has part: feature:242083-242246:1:exon
so has part: feature:243229-243361:1:exon
so has part: feature:243836-243883:1:exon

XP_050571366.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:232083-232281:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:232935-233044:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:234044-234141:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:234295-234376:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:234727-234855:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:235028-235153:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:236172-236384:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:237335-237475:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:237564-237722:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:238328-238435:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:239292-239467:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:239810-239922:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:240445-240564:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:240822-241000:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:242083-242246:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:243229-243361:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:243836-243883:1:exon

CSDE1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8868
gene: CSDE1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: cold shock domain-containing protein E1 isoform X3
translation: MSFDPNLLHNNGHNGYPNGTSAALRETGVIEKLLTSYGFIQCSERQARLFFHCSQYNGNLQELKVGDDVEFEVSSDRRTGKPIAVKLVKIKPEILPEERINGQEVFYLTYTPEDVEGNIQLETGDKINFVIDTNKHTGAVSARNIMLLKKKQARCQGVVCAMKEAFGFIERGDVVKEIFFHYSEFKGDLEALQPGDDVEFTIKDRNGKEVATDVRLLPQGTVIFEDISIEHFEGTVTKVIPKVPSKNQNDPLPGRIKVDFVIPKELPFGDKDTKSKVTLLESDHVRFNISTDRRDKLERATNIEVLPNTFQFTNETREMGVIAAMRDGFGFIKCVDRDARMFFHFSEIMDGNQLHISDEVEFTVVPDMLSAQRNHAIRIKKLPKGTVSFHTQSDHRFVGTIDKEATPAKATSPNKGKEKEAEDGIIVYDDCGVKLTIPYQAKDVEGSANPQIGDKVEFSVCEVKRTGLQTAVSVRMLGRNYSSKRLLGYVAALKDNFGFIETANHDKEIFFHYSEYCGDIDSLELGDTVEYSLSKGKGNKVSAEKVNKTHAVNGITEEADPTVYSGKVIRPLRSVDPTQTEYQGMIEVMEDGEMKGEFYPFGIVGMANKGDCLQKGETVKFQLCVLGQNGQTMAVNITPFRRATVECVKDQFGFINYEVGDSKKLFFHVKEVQDGVELQAGDEVEFSVILNQRTGKCSACNVWRVCEGAKAVAAPRPDRLVNRLKSINLDDANAPRLTVLRQPRGPDNSKGFGAERKIRQAGVID
SIO_010081: CSDE1
subclass of: SO_0000673
so part of: CSDE1
location: join(232083..232281,232935..233044,234044..234141,234295..234376,234727..234855,235028..235153,236172..236384,237335..237475,237564..237722,238328..238435,239292..239467,239810..239922,240445..240564,240822..241000,242083..242246,243229..243361,243836..243883)
location: region:232083-243883:1
so has part: feature:232083-232281:1:exon
so has part: feature:232935-233044:1:exon
so has part: feature:234044-234141:1:exon
so has part: feature:234295-234376:1:exon
so has part: feature:234727-234855:1:exon
so has part: feature:235028-235153:1:exon
so has part: feature:236172-236384:1:exon
so has part: feature:237335-237475:1:exon
so has part: feature:237564-237722:1:exon
so has part: feature:238328-238435:1:exon
so has part: feature:239292-239467:1:exon
so has part: feature:239810-239922:1:exon
so has part: feature:240445-240564:1:exon
so has part: feature:240822-241000:1:exon
so has part: feature:242083-242246:1:exon
so has part: feature:243229-243361:1:exon
so has part: feature:243836-243883:1:exon

XP_050571367.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:232083-232281:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:232935-233044:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:234044-234141:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:234295-234376:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:234727-234855:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:235028-235153:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:236172-236384:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:237335-237475:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:237564-237722:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:238328-238435:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:239292-239467:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:239810-239922:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:240445-240564:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:240822-241000:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:242083-242246:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:243229-243361:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:243836-243883:1:exon

NRAS
type: Gene
subclass of: SO_0000704
RO_0002162: 8868
gene: NRAS
note: NRAS proto-oncogene, GTPase; Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 245299..254143
location: region:245299-254143:1
so has part: feature:245299-254143:1:exon
subclass of: SO_0000010

118255298
type: Gene
SIO_000068: ncbigene

position:245299:1
position: 245299
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:254143:1
position: 254143
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:245299-254143:1:exon

NRAS
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8868
gene: NRAS
product: NRAS proto-oncogene, GTPase
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_035561381.2
SIO_010081: NRAS
subclass of: SO_0000673
so part of: NRAS
location: join(245299..245517,246533..246711,247177..247336,248876..248999,249663..254143)
location: region:245299-254143:1
so has part: feature:245299-245517:1:exon
so has part: feature:246533-246711:1:exon
so has part: feature:247177-247336:1:exon
so has part: feature:248876-248999:1:exon
so has part: feature:249663-254143:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:245299-245517:1:exon

position:245517:1
position: 245517
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:246533-246711:1:exon

position:246533:1
position: 246533
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:246711:1
position: 246711
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:247177-247336:1:exon

position:247177:1
position: 247177
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:247336:1
position: 247336
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:248876-248999:1:exon

position:248876:1
position: 248876
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:248999:1
position: 248999
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:249663-254143:1:exon

position:249663:1
position: 249663
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

NRAS
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8868
gene: NRAS
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: GTPase NRas
translation: MTEYKLVVVGAGGVGKSALTIQLIQNHFVDEYDPTIEDSYRKQVVIDGETCLLDILDTAGQEEYSAMRDQYMRTGEGFLCVFAINNSKSFADINLYREQIKRVKDSDDVPMVLVGNKCDLPTRTVDTKQAQELAKSYGIPFIETSAKTRQGVEDAFYTLVREIRQYRMKKLNSSEDGNQGCMGLSCIVM
SIO_010081: NRAS
subclass of: SO_0000673
so part of: NRAS
location: join(245407..245517,246533..246711,247177..247336,248876..248995)
location: region:245407-248995:1
so has part: feature:245407-245517:1:exon
so has part: feature:246533-246711:1:exon
so has part: feature:247177-247336:1:exon
so has part: feature:248876-248995:1:exon

XP_035417274.1
type: Protein
SIO_000068: ncbiprotein

position:245407:1
position: 245407
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:248995:1
position: 248995
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:245407-245517:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:246533-246711:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:247177-247336:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:248876-248995:1:exon

AMPD1
type: Gene
subclass of: SO_0000704
RO_0002162: 8868
gene: AMPD1
note: adenosine monophosphate deaminase 1; Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 258185..268369
location: region:258185-268369:1
so has part: feature:258185-268369:1:exon
subclass of: SO_0000010

118255297
type: Gene
SIO_000068: ncbigene

position:258185:1
position: 258185
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:268369:1
position: 268369
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:258185-268369:1:exon

AMPD1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8868
gene: AMPD1
product: adenosine monophosphate deaminase 1
exception: unclassified transcription discrepancy
note: The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: inserted 5 bases in 5 codons; deleted 9 bases in 8 codons; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins
transcript id: XM_035561379.1
SIO_010081: AMPD1
subclass of: SO_0000673
so part of: AMPD1
location: join(258185..258206,259769..259780,261471..261646,262143..262306,263433..263596,263821..264039,264556..264684,264964..265161,265396..265527,265625..265788,265919..266045,266507..266671,267020..267141,267594..267767,267942..268053,268214..268369)
location: region:258185-268369:1
so has part: feature:258185-258206:1:exon
so has part: feature:259769-259780:1:exon
so has part: feature:261471-261646:1:exon
so has part: feature:262143-262306:1:exon
so has part: feature:263433-263596:1:exon
so has part: feature:263821-264039:1:exon
so has part: feature:264556-264684:1:exon
so has part: feature:264964-265161:1:exon
so has part: feature:265396-265527:1:exon
so has part: feature:265625-265788:1:exon
so has part: feature:265919-266045:1:exon
so has part: feature:266507-266671:1:exon
so has part: feature:267020-267141:1:exon
so has part: feature:267594-267767:1:exon
so has part: feature:267942-268053:1:exon
so has part: feature:268214-268369:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:258185-258206:1:exon

position:258206:1
position: 258206
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:259769-259780:1:exon

position:259769:1
position: 259769
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:259780:1
position: 259780
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:261471-261646:1:exon

position:261471:1
position: 261471
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:261646:1
position: 261646
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:262143-262306:1:exon

position:262143:1
position: 262143
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:262306:1
position: 262306
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:263433-263596:1:exon

position:263433:1
position: 263433
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:263596:1
position: 263596
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:263821-264039:1:exon

position:263821:1
position: 263821
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:264039:1
position: 264039
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:264556-264684:1:exon

position:264556:1
position: 264556
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:264684:1
position: 264684
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:264964-265161:1:exon

position:264964:1
position: 264964
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:265161:1
position: 265161
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:265396-265527:1:exon

position:265396:1
position: 265396
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:265527:1
position: 265527
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:265625-265788:1:exon

position:265625:1
position: 265625
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:265788:1
position: 265788
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:265919-266045:1:exon

position:265919:1
position: 265919
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:266045:1
position: 266045
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:266507-266671:1:exon

position:266507:1
position: 266507
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:266671:1
position: 266671
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:267020-267141:1:exon

position:267020:1
position: 267020
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:267141:1
position: 267141
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:267594-267767:1:exon

position:267594:1
position: 267594
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:267767:1
position: 267767
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:267942-268053:1:exon

position:267942:1
position: 267942
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:268053:1
position: 268053
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:268214-268369:1:exon

position:268214:1
position: 268214
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

AMPD1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8868
gene: AMPD1
exception: unclassified translation discrepancy
note: The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: inserted 5 bases in 5 codons; deleted 9 bases in 8 codons; substituted 2 bases at 2 genomic stop codons; Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
transl except: (pos:263912..263914,aa:OTHER)
transl except: (pos:263972..263974,aa:OTHER)
product: LOW QUALITY PROTEIN: AMP deaminase 1
translation: MSRVKIPAEEKEMDEAMRSFAEKVFASEVKDEANRQEISPFDVEEICPISRQEMRTHMMLQESSSTAEKRRKRMLRLKTIALALPXAQKSITRLSTIDEVISTSPLYQXVPDFQRVQITGDYASGVTVEDFEVVCKGLYRALCIREKYMLKSVQRFPRTPSQYLRAIEGDVWRATDAGPVFTPPVKDGQDPFETXNLAEDLGYHLEMKDGXFYIYGDKAAVGRKEPKDRPXPCLEHFVDDMNFLLALIAQGPVKTYAHRRLKFLSXKFQVHEMLNEMEEMKELKNNPHRDFYNCRKVDTHIHAAALHTRKHLLRFIKKSYRVDADRVVYDSKGKQLTLKQLFQQLNLHPYDLTVDSLDVHAGRQTFQRFDKFNAKYNPVGASELRDLYLKTENAINGEYFATIIKEVGSDLEDAKYQYAEPRLSIYGXSAEEWHKLASWFNRHRVYSPNMKWMIQVPRIYDVFRSQNFLPHFGKMLENIFVPVFEATVNPQTHKELSVFLRHITGFDSVDDESKHSGHMFSTKSPKPEQWTSAKNPSYTYYIYYMYANILVLNNLRRQRGMNTFLFRPHCGEAGAITHLLAAFMTADNVSHGLNLKKSPVLQYLYFLAQIPIAMSPLSNNSLFLEYAKNPLPDFHQKGLMVSLSTDDPMQFHFTKEPLMEEYAIAAQVFKLSTCDMCEIARNSVLQCGLSHEEKAKFLGENYQEEGPQGNDIRKTNVAQIRMAYRYETWCYELNLIAEGLKAE
SIO_010081: AMPD1
subclass of: SO_0000673
so part of: AMPD1
location: join(258185..258206,259769..259780,261471..261646,262143..262306,263433..263596,263821..264039,264556..264684,264964..265161,265396..265527,265625..265788,265919..266045,266507..266671,267020..267141,267594..267767,267942..268053,268214..268369)
location: region:258185-268369:1
so has part: feature:258185-258206:1:exon
so has part: feature:259769-259780:1:exon
so has part: feature:261471-261646:1:exon
so has part: feature:262143-262306:1:exon
so has part: feature:263433-263596:1:exon
so has part: feature:263821-264039:1:exon
so has part: feature:264556-264684:1:exon
so has part: feature:264964-265161:1:exon
so has part: feature:265396-265527:1:exon
so has part: feature:265625-265788:1:exon
so has part: feature:265919-266045:1:exon
so has part: feature:266507-266671:1:exon
so has part: feature:267020-267141:1:exon
so has part: feature:267594-267767:1:exon
so has part: feature:267942-268053:1:exon
so has part: feature:268214-268369:1:exon

XP_035417272.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:258185-258206:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:259769-259780:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:261471-261646:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:262143-262306:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:263433-263596:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:263821-264039:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:264556-264684:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:264964-265161:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:265396-265527:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:265625-265788:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:265919-266045:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:266507-266671:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:267020-267141:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:267594-267767:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:267942-268053:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:268214-268369:1:exon

DENND2C
type: Gene
subclass of: SO_0000704
RO_0002162: 8868
gene: DENND2C
note: DENN domain containing 2C; Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 268274..291923
location: region:268274-291923:1
so has part: feature:268274-291923:1:exon
subclass of: SO_0000010

118255295
type: Gene
SIO_000068: ncbigene

position:268274:1
position: 268274
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:291923:1
position: 291923
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:268274-291923:1:exon

DENND2C
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8868
gene: DENND2C
product: DENN domain containing 2C, transcript variant X9
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 long SRA reads, 7 Proteins
transcript id: XM_050715311.1
SIO_010081: DENND2C
subclass of: SO_0000673
so part of: DENND2C
location: join(268274..268365,274416..275380,275917..276065,276634..276746,277117..277284,279981..280074,280818..280862,282171..282358,284965..285074,285587..285656,286022..286099,286792..286932,287309..287457,287840..288017,288332..288373,289345..289450,290265..290504,291039..291125,291712..291920)
location: region:268274-291920:1
so has part: feature:268274-268365:1:exon
so has part: feature:274416-275380:1:exon
so has part: feature:275917-276065:1:exon
so has part: feature:276634-276746:1:exon
so has part: feature:277117-277284:1:exon
so has part: feature:279981-280074:1:exon
so has part: feature:280818-280862:1:exon
so has part: feature:282171-282358:1:exon
so has part: feature:284965-285074:1:exon
so has part: feature:285587-285656:1:exon
so has part: feature:286022-286099:1:exon
so has part: feature:286792-286932:1:exon
so has part: feature:287309-287457:1:exon
so has part: feature:287840-288017:1:exon
so has part: feature:288332-288373:1:exon
so has part: feature:289345-289450:1:exon
so has part: feature:290265-290504:1:exon
so has part: feature:291039-291125:1:exon
so has part: feature:291712-291920:1:exon

position:291920:1
position: 291920
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:268274-268365:1:exon

position:268365:1
position: 268365
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:274416-275380:1:exon

position:274416:1
position: 274416
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:275380:1
position: 275380
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:275917-276065:1:exon

position:275917:1
position: 275917
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:276065:1
position: 276065
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:276634-276746:1:exon

position:276634:1
position: 276634
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:276746:1
position: 276746
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:277117-277284:1:exon

position:277117:1
position: 277117
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:277284:1
position: 277284
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:279981-280074:1:exon

position:279981:1
position: 279981
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:280074:1
position: 280074
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:280818-280862:1:exon

position:280818:1
position: 280818
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:280862:1
position: 280862
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:282171-282358:1:exon

position:282171:1
position: 282171
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:282358:1
position: 282358
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:284965-285074:1:exon

position:284965:1
position: 284965
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:285074:1
position: 285074
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:285587-285656:1:exon

position:285587:1
position: 285587
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:285656:1
position: 285656
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:286022-286099:1:exon

position:286022:1
position: 286022
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:286099:1
position: 286099
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:286792-286932:1:exon

position:286792:1
position: 286792
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:286932:1
position: 286932
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:287309-287457:1:exon

position:287309:1
position: 287309
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:287457:1
position: 287457
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:287840-288017:1:exon

position:287840:1
position: 287840
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:288017:1
position: 288017
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:288332-288373:1:exon

position:288332:1
position: 288332
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:288373:1
position: 288373
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:289345-289450:1:exon

position:289345:1
position: 289345
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:289450:1
position: 289450
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:290265-290504:1:exon

position:290265:1
position: 290265
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:290504:1
position: 290504
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:291039-291125:1:exon

position:291039:1
position: 291039
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:291125:1
position: 291125
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:291712-291920:1:exon

position:291712:1
position: 291712
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

DENND2C
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8868
gene: DENND2C
product: DENN domain containing 2C, transcript variant X6
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins
transcript id: XM_035561374.2
SIO_010081: DENND2C
subclass of: SO_0000673
so part of: DENND2C
location: join(268386..268516,274416..275380,275917..276065,276634..276746,277117..277284,279981..280074,280818..280862,282171..282358,284965..285074,285587..285674,286022..286099,286792..286932,287309..287457,287840..288017,288332..288373,289345..289450,290265..290504,291039..291125,291712..291898)
location: region:268386-291898:1
so has part: feature:268386-268516:1:exon
so has part: feature:274416-275380:1:exon
so has part: feature:275917-276065:1:exon
so has part: feature:276634-276746:1:exon
so has part: feature:277117-277284:1:exon
so has part: feature:279981-280074:1:exon
so has part: feature:280818-280862:1:exon
so has part: feature:282171-282358:1:exon
so has part: feature:284965-285074:1:exon
so has part: feature:285587-285674:1:exon
so has part: feature:286022-286099:1:exon
so has part: feature:286792-286932:1:exon
so has part: feature:287309-287457:1:exon
so has part: feature:287840-288017:1:exon
so has part: feature:288332-288373:1:exon
so has part: feature:289345-289450:1:exon
so has part: feature:290265-290504:1:exon
so has part: feature:291039-291125:1:exon
so has part: feature:291712-291898:1:exon

position:268386:1
position: 268386
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:291898:1
position: 291898
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:268386-268516:1:exon

position:268516:1
position: 268516
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:274416-275380:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:275917-276065:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:276634-276746:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:277117-277284:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:279981-280074:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:280818-280862:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:282171-282358:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:284965-285074:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:285587-285674:1:exon

position:285674:1
position: 285674
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:286022-286099:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:286792-286932:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:287309-287457:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:287840-288017:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:288332-288373:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:289345-289450:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:290265-290504:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:291039-291125:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:291712-291898:1:exon

DENND2C
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8868
gene: DENND2C
product: DENN domain containing 2C, transcript variant X7
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins
transcript id: XM_035561376.2
SIO_010081: DENND2C
subclass of: SO_0000673
so part of: DENND2C
location: join(268842..268983,274416..275380,275917..276065,276634..276746,277117..277284,279981..280074,280818..280862,282171..282358,284965..285074,285587..285674,286022..286099,286792..286932,287309..287457,287840..288017,288332..288373,289345..289450,290265..290504,291039..291125,291712..291898)
location: region:268842-291898:1
so has part: feature:268842-268983:1:exon
so has part: feature:274416-275380:1:exon
so has part: feature:275917-276065:1:exon
so has part: feature:276634-276746:1:exon
so has part: feature:277117-277284:1:exon
so has part: feature:279981-280074:1:exon
so has part: feature:280818-280862:1:exon
so has part: feature:282171-282358:1:exon
so has part: feature:284965-285074:1:exon
so has part: feature:285587-285674:1:exon
so has part: feature:286022-286099:1:exon
so has part: feature:286792-286932:1:exon
so has part: feature:287309-287457:1:exon
so has part: feature:287840-288017:1:exon
so has part: feature:288332-288373:1:exon
so has part: feature:289345-289450:1:exon
so has part: feature:290265-290504:1:exon
so has part: feature:291039-291125:1:exon
so has part: feature:291712-291898:1:exon

position:268842:1
position: 268842
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:268842-268983:1:exon

position:268983:1
position: 268983
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:274416-275380:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:275917-276065:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:276634-276746:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:277117-277284:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:279981-280074:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:280818-280862:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:282171-282358:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:284965-285074:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:285587-285674:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:286022-286099:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:286792-286932:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:287309-287457:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:287840-288017:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:288332-288373:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:289345-289450:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:290265-290504:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:291039-291125:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:291712-291898:1:exon

DENND2C
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8868
gene: DENND2C
product: DENN domain containing 2C, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 16 long SRA reads, 7 Proteins
transcript id: XM_035561370.2
SIO_010081: DENND2C
subclass of: SO_0000673
so part of: DENND2C
location: join(269135..269269,274416..275380,275917..276065,276634..276746,277117..277284,279981..280074,280818..280862,282171..282358,284965..285074,285587..285656,286022..286099,286792..286932,287309..287457,287840..288017,288332..288373,289345..289450,290265..290504,291039..291125,291712..291920)
location: region:269135-291920:1
so has part: feature:269135-269269:1:exon
so has part: feature:274416-275380:1:exon
so has part: feature:275917-276065:1:exon
so has part: feature:276634-276746:1:exon
so has part: feature:277117-277284:1:exon
so has part: feature:279981-280074:1:exon
so has part: feature:280818-280862:1:exon
so has part: feature:282171-282358:1:exon
so has part: feature:284965-285074:1:exon
so has part: feature:285587-285656:1:exon
so has part: feature:286022-286099:1:exon
so has part: feature:286792-286932:1:exon
so has part: feature:287309-287457:1:exon
so has part: feature:287840-288017:1:exon
so has part: feature:288332-288373:1:exon
so has part: feature:289345-289450:1:exon
so has part: feature:290265-290504:1:exon
so has part: feature:291039-291125:1:exon
so has part: feature:291712-291920:1:exon

position:269135:1
position: 269135
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:269135-269269:1:exon

position:269269:1
position: 269269
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:274416-275380:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:275917-276065:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:276634-276746:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:277117-277284:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:279981-280074:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:280818-280862:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:282171-282358:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:284965-285074:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:285587-285656:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:286022-286099:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:286792-286932:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:287309-287457:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:287840-288017:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:288332-288373:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:289345-289450:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:290265-290504:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:291039-291125:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:291712-291920:1:exon

DENND2C
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8868
gene: DENND2C
product: DENN domain containing 2C, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 long SRA read, 1 Protein
transcript id: XM_035561369.2
SIO_010081: DENND2C
subclass of: SO_0000673
so part of: DENND2C
location: join(269135..269269,274416..275380,275917..276065,276634..276746,277117..277284,279981..280074,280818..280862,282171..282358,284965..285074,285587..285674,286022..286099,286792..286932,287309..287457,287840..288017,288332..288373,289345..289450,290265..290504,291039..291125,291712..291899)
location: region:269135-291899:1
so has part: feature:269135-269269:1:exon
so has part: feature:274416-275380:1:exon
so has part: feature:275917-276065:1:exon
so has part: feature:276634-276746:1:exon
so has part: feature:277117-277284:1:exon
so has part: feature:279981-280074:1:exon
so has part: feature:280818-280862:1:exon
so has part: feature:282171-282358:1:exon
so has part: feature:284965-285074:1:exon
so has part: feature:285587-285674:1:exon
so has part: feature:286022-286099:1:exon
so has part: feature:286792-286932:1:exon
so has part: feature:287309-287457:1:exon
so has part: feature:287840-288017:1:exon
so has part: feature:288332-288373:1:exon
so has part: feature:289345-289450:1:exon
so has part: feature:290265-290504:1:exon
so has part: feature:291039-291125:1:exon
so has part: feature:291712-291899:1:exon

position:291899:1
position: 291899
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:269135-269269:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:274416-275380:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:275917-276065:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:276634-276746:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:277117-277284:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:279981-280074:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:280818-280862:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:282171-282358:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:284965-285074:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:285587-285674:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:286022-286099:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:286792-286932:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:287309-287457:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:287840-288017:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:288332-288373:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:289345-289450:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:290265-290504:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:291039-291125:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:291712-291899:1:exon

DENND2C
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8868
gene: DENND2C
product: DENN domain containing 2C, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins
transcript id: XM_035561372.2
SIO_010081: DENND2C
subclass of: SO_0000673
so part of: DENND2C
location: join(269166..269269,274416..275380,275917..276065,276634..276746,277117..277284,279981..280074,280818..280862,282171..282358,284965..285074,285587..285674,286022..286099,286792..286932,287309..287457,287840..288017,288332..288373,289345..289450,290265..290504,291712..291899)
location: region:269166-291899:1
so has part: feature:269166-269269:1:exon
so has part: feature:274416-275380:1:exon
so has part: feature:275917-276065:1:exon
so has part: feature:276634-276746:1:exon
so has part: feature:277117-277284:1:exon
so has part: feature:279981-280074:1:exon
so has part: feature:280818-280862:1:exon
so has part: feature:282171-282358:1:exon
so has part: feature:284965-285074:1:exon
so has part: feature:285587-285674:1:exon
so has part: feature:286022-286099:1:exon
so has part: feature:286792-286932:1:exon
so has part: feature:287309-287457:1:exon
so has part: feature:287840-288017:1:exon
so has part: feature:288332-288373:1:exon
so has part: feature:289345-289450:1:exon
so has part: feature:290265-290504:1:exon
so has part: feature:291712-291899:1:exon

position:269166:1
position: 269166
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:269166-269269:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:274416-275380:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:275917-276065:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:276634-276746:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:277117-277284:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:279981-280074:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:280818-280862:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:282171-282358:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:284965-285074:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:285587-285674:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:286022-286099:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:286792-286932:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:287309-287457:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:287840-288017:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:288332-288373:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:289345-289450:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:290265-290504:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:291712-291899:1:exon

DENND2C
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8868
gene: DENND2C
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: DENN domain-containing protein 2C isoform X1
translation: MSGGEKRLGKRTRVLLACAAPVWRGYGRGVEERVVLTGSPCRSDTQGFLETAACFGVSCQLDTCRAQVNLSKAGDGVFISTLALTMHPTGTADGSFSRSAVQTLSRSHCRNIKQKISQWEGRTRGCSSKEKECLKDFGVKYDPGCDVLSKVKPEHTEKGRKAGSKDPKNLGLDFRENAGSCLQTDDHGDLKSCACSLASQAEENGEWQAGFLDPGKALPPGSFYASRGLWRRADAFLPGKAPPVPLDLERKQGSCGSTERELRAEEVDSFCRAERSMKDIYSVAVGQEEEPAAVPPPKPRRTFRYLAEKTASGCSNASATKEASLQKKHGGDSVSSSNNLEKRTASRSIRGRTQRKSFEFEDIQGFRNWMAATSSHKLREETNDTAGSRLIYAQSEDNIYEDIICPTKENPYEDTRVLPLPLWKIPSVWKLPPSRSTSRAPKLPPKPSFLSRKTLELQPSLTNLQGKMVKDTTLPVTFTEWKLFRAAEAASRRKNLPWLVLKVQEIFDSKRGKKRVKLLSPAGRVTPTKGETSGNESDTENQPKNRHRGLLLVQSASKRNPHYQTLERDLIEFQEQQLFELFVVVSLHKKASEIKYTPQIIQQFPNKAEHPFRQSKDTEERLKVIPKFCFPDPKDWFPASQLTSETFSFVLTGEDGSRWFGYCKKLLVSKKLLPEGKGKRLPEVYCIVSRLGCFNLFSKILDEVEKRREMSPALVHPFMRSVMEAPFPAPGRTITVKSFLPGAGNEVMELCRPSDSRLEHVDFECLFKCLSVSHMIRVFASLLLERRVIFVADNLSTLSKCGHAAVAILYPFTWQHTYIPVLPTSMIDIVCSPTPFLIGILSCSLPQLQDLPVEEVLIVDLCADRFLQEVSDEDEILPHKLQAALVQILEERNEILSHEQSCIQGDMPLNSLVSEAFVQFFVEIVGHYSLHMNVTEKGERVFQRELFRKSHMSRNVRHFLHFFMETQMFAGFIQDRELSKNVVKGLFEVRALEFLESVTETEPTGMNKILRSLGSKMKFLQKK
SIO_010081: DENND2C
subclass of: SO_0000673
so part of: DENND2C
location: join(269171..269269,274416..275380,275917..276065,276634..276746,277117..277284,279981..280074,280818..280862,282171..282358,284965..285074,285587..285674,286022..286099,286792..286932,287309..287457,287840..288017,288332..288373,289345..289450,290265..290504,291039..291125,291712..291743)
location: region:269171-291743:1
so has part: feature:269171-269269:1:exon
so has part: feature:274416-275380:1:exon
so has part: feature:275917-276065:1:exon
so has part: feature:276634-276746:1:exon
so has part: feature:277117-277284:1:exon
so has part: feature:279981-280074:1:exon
so has part: feature:280818-280862:1:exon
so has part: feature:282171-282358:1:exon
so has part: feature:284965-285074:1:exon
so has part: feature:285587-285674:1:exon
so has part: feature:286022-286099:1:exon
so has part: feature:286792-286932:1:exon
so has part: feature:287309-287457:1:exon
so has part: feature:287840-288017:1:exon
so has part: feature:288332-288373:1:exon
so has part: feature:289345-289450:1:exon
so has part: feature:290265-290504:1:exon
so has part: feature:291039-291125:1:exon
so has part: feature:291712-291743:1:exon

XP_035417262.1
type: Protein
SIO_000068: ncbiprotein

position:269171:1
position: 269171
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:291743:1
position: 291743
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:269171-269269:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:274416-275380:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:275917-276065:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:276634-276746:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:277117-277284:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:279981-280074:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:280818-280862:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:282171-282358:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:284965-285074:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:285587-285674:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:286022-286099:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:286792-286932:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:287309-287457:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:287840-288017:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:288332-288373:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:289345-289450:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:290265-290504:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:291039-291125:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:291712-291743:1:exon

DENND2C
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8868
gene: DENND2C
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: DENN domain-containing protein 2C isoform X4
translation: MSGGEKRLGKRTRVLLACAAPVWRGYGRGVEERVVLTGSPCRSDTQGFLETAACFGVSCQLDTCRAQVNLSKAGDGVFISTLALTMHPTGTADGSFSRSAVQTLSRSHCRNIKQKISQWEGRTRGCSSKEKECLKDFGVKYDPGCDVLSKVKPEHTEKGRKAGSKDPKNLGLDFRENAGSCLQTDDHGDLKSCACSLASQAEENGEWQAGFLDPGKALPPGSFYASRGLWRRADAFLPGKAPPVPLDLERKQGSCGSTERELRAEEVDSFCRAERSMKDIYSVAVGQEEEPAAVPPPKPRRTFRYLAEKTASGCSNASATKEASLQKKHGGDSVSSSNNLEKRTASRSIRGRTQRKSFEFEDIQGFRNWMAATSSHKLREETNDTAGSRLIYAQSEDNIYEDIICPTKENPYEDTRVLPLPLWKIPSVWKLPPSRSTSRAPKLPPKPSFLSRKTLELQPSLTNLQGKMVKDTTLPVTFTEWKLFRAAEAASRRKNLPWLVLKVQEIFDSKRGKKRVKLLSPAGRVTPTKGETSGNESDTENQPKNRHRGLLLVQSASKRNPHYQTLERDLIEFQEQQLFELFVVVSLHKKASEIKYTPQIIQQFPNKAEHPFRQSKDTEERLKVIPKFCFPDPKDWFPASQLTSETFSFVLTGEDGSRWFGYCKKLLVSKKLLPEGKGKRLPEVYCIVSRLGCFNLFSKILDEVEKRREMSPALVHPFMRSVMEAPFPAPGRTITVKSFLPGAGNEVMELCRPSDSRLEHVDFECLFKCLSVSHMIRVFASLLLERRVIFVADNLSTLSKCGHAAVAILYPFTWQHTYIPVLPTSMIDIVCSPTPFLIGILSCSLPQLQDLPVEEVLIVDLCADRFLQEVSDEDEILPHKLQAALVQILEERNEILSHEQSCIQGDMPLNSLVSEAFVQFFVEIVGHYSLHMNVTEKGERVFQRELFRKSHMSRNVRHFLHFFMETQMFAGFIQDRELSKNVVKGSKMKFLQKK
SIO_010081: DENND2C
subclass of: SO_0000673
so part of: DENND2C
location: join(269171..269269,274416..275380,275917..276065,276634..276746,277117..277284,279981..280074,280818..280862,282171..282358,284965..285074,285587..285674,286022..286099,286792..286932,287309..287457,287840..288017,288332..288373,289345..289450,290265..290504,291712..291743)
location: region:269171-291743:1
so has part: feature:269171-269269:1:exon
so has part: feature:274416-275380:1:exon
so has part: feature:275917-276065:1:exon
so has part: feature:276634-276746:1:exon
so has part: feature:277117-277284:1:exon
so has part: feature:279981-280074:1:exon
so has part: feature:280818-280862:1:exon
so has part: feature:282171-282358:1:exon
so has part: feature:284965-285074:1:exon
so has part: feature:285587-285674:1:exon
so has part: feature:286022-286099:1:exon
so has part: feature:286792-286932:1:exon
so has part: feature:287309-287457:1:exon
so has part: feature:287840-288017:1:exon
so has part: feature:288332-288373:1:exon
so has part: feature:289345-289450:1:exon
so has part: feature:290265-290504:1:exon
so has part: feature:291712-291743:1:exon

XP_035417265.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:269171-269269:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:274416-275380:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:275917-276065:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:276634-276746:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:277117-277284:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:279981-280074:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:280818-280862:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:282171-282358:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:284965-285074:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:285587-285674:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:286022-286099:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:286792-286932:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:287309-287457:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:287840-288017:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:288332-288373:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:289345-289450:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:290265-290504:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:291712-291743:1:exon

DENND2C
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8868
gene: DENND2C
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: DENN domain-containing protein 2C isoform X2
translation: MSGGEKRLGKRTRVLLACAAPVWRGYGRGVEERVVLTGSPCRSDTQGFLETAACFGVSCQLDTCRAQVNLSKAGDGVFISTLALTMHPTGTADGSFSRSAVQTLSRSHCRNIKQKISQWEGRTRGCSSKEKECLKDFGVKYDPGCDVLSKVKPEHTEKGRKAGSKDPKNLGLDFRENAGSCLQTDDHGDLKSCACSLASQAEENGEWQAGFLDPGKALPPGSFYASRGLWRRADAFLPGKAPPVPLDLERKQGSCGSTERELRAEEVDSFCRAERSMKDIYSVAVGQEEEPAAVPPPKPRRTFRYLAEKTASGCSNASATKEASLQKKHGGDSVSSSNNLEKRTASRSIRGRTQRKSFEFEDIQGFRNWMAATSSHKLREETNDTAGSRLIYAQSEDNIYEDIICPTKENPYEDTRVLPLPLWKIPSVWKLPPSRSTSRAPKLPPKPSFLSRKTLELQPSLTNLQGKMVKDTTLPVTFTEWKLFRAAEAASRRKNLPWLVLKVQEIFDSKRGKKRVKLLSPAGRVTPTKGETSGNESDTENQPKNRHRGLLLVQSASKRNPHYQTLERDLIEFQEQQLFELFVVVSLHKKASEIKYTPQIIQQFPNKAEHPFRQSKDTEERLKVIPKFCFPDPKDWFPASQLTSETFSFVLTGEDGSRWFGYCKKLLPEGKGKRLPEVYCIVSRLGCFNLFSKILDEVEKRREMSPALVHPFMRSVMEAPFPAPGRTITVKSFLPGAGNEVMELCRPSDSRLEHVDFECLFKCLSVSHMIRVFASLLLERRVIFVADNLSTLSKCGHAAVAILYPFTWQHTYIPVLPTSMIDIVCSPTPFLIGILSCSLPQLQDLPVEEVLIVDLCADRFLQEVSDEDEILPHKLQAALVQILEERNEILSHEQSCIQGDMPLNSLVSEAFVQFFVEIVGHYSLHMNVTEKGERVFQRELFRKSHMSRNVRHFLHFFMETQMFAGFIQDRELSKNVVKGLFEVRALEFLESVTETEPTGMNKILRSLGSKMKFLQKK
SIO_010081: DENND2C
subclass of: SO_0000673
so part of: DENND2C
location: join(269171..269269,274416..275380,275917..276065,276634..276746,277117..277284,279981..280074,280818..280862,282171..282358,284965..285074,285587..285656,286022..286099,286792..286932,287309..287457,287840..288017,288332..288373,289345..289450,290265..290504,291039..291125,291712..291743)
location: region:269171-291743:1
so has part: feature:269171-269269:1:exon
so has part: feature:274416-275380:1:exon
so has part: feature:275917-276065:1:exon
so has part: feature:276634-276746:1:exon
so has part: feature:277117-277284:1:exon
so has part: feature:279981-280074:1:exon
so has part: feature:280818-280862:1:exon
so has part: feature:282171-282358:1:exon
so has part: feature:284965-285074:1:exon
so has part: feature:285587-285656:1:exon
so has part: feature:286022-286099:1:exon
so has part: feature:286792-286932:1:exon
so has part: feature:287309-287457:1:exon
so has part: feature:287840-288017:1:exon
so has part: feature:288332-288373:1:exon
so has part: feature:289345-289450:1:exon
so has part: feature:290265-290504:1:exon
so has part: feature:291039-291125:1:exon
so has part: feature:291712-291743:1:exon

XP_035417263.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:269171-269269:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:274416-275380:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:275917-276065:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:276634-276746:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:277117-277284:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:279981-280074:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:280818-280862:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:282171-282358:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:284965-285074:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:285587-285656:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:286022-286099:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:286792-286932:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:287309-287457:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:287840-288017:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:288332-288373:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:289345-289450:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:290265-290504:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:291039-291125:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:291712-291743:1:exon

DENND2C
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8868
gene: DENND2C
product: DENN domain containing 2C, transcript variant X8
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins
transcript id: XM_035561375.2
SIO_010081: DENND2C
subclass of: SO_0000673
so part of: DENND2C
location: join(269514..269636,274416..275380,275917..276065,276634..276746,277117..277284,279981..280074,280818..280862,282171..282358,284965..285074,285587..285674,286022..286099,286792..286932,287309..287457,287840..288017,288332..288373,289345..289450,290265..290504,291039..291125,291712..291898)
location: region:269514-291898:1
so has part: feature:269514-269636:1:exon
so has part: feature:274416-275380:1:exon
so has part: feature:275917-276065:1:exon
so has part: feature:276634-276746:1:exon
so has part: feature:277117-277284:1:exon
so has part: feature:279981-280074:1:exon
so has part: feature:280818-280862:1:exon
so has part: feature:282171-282358:1:exon
so has part: feature:284965-285074:1:exon
so has part: feature:285587-285674:1:exon
so has part: feature:286022-286099:1:exon
so has part: feature:286792-286932:1:exon
so has part: feature:287309-287457:1:exon
so has part: feature:287840-288017:1:exon
so has part: feature:288332-288373:1:exon
so has part: feature:289345-289450:1:exon
so has part: feature:290265-290504:1:exon
so has part: feature:291039-291125:1:exon
so has part: feature:291712-291898:1:exon

position:269514:1
position: 269514
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:269514-269636:1:exon

position:269636:1
position: 269636
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:274416-275380:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:275917-276065:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:276634-276746:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:277117-277284:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:279981-280074:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:280818-280862:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:282171-282358:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:284965-285074:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:285587-285674:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:286022-286099:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:286792-286932:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:287309-287457:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:287840-288017:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:288332-288373:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:289345-289450:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:290265-290504:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:291039-291125:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:291712-291898:1:exon

DENND2C
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8868
gene: DENND2C
product: DENN domain containing 2C, transcript variant X5
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 35 long SRA reads, 8 Proteins
transcript id: XM_035561373.2
SIO_010081: DENND2C
subclass of: SO_0000673
so part of: DENND2C
location: join(270859..271184,274416..275380,275917..276065,276634..276746,277117..277284,279981..280074,280818..280862,282171..282358,284965..285074,285587..285656,286022..286099,286792..286932,287309..287457,287840..288017,288332..288373,289345..289450,290265..290504,291039..291125,291712..291923)
location: region:270859-291923:1
so has part: feature:270859-271184:1:exon
so has part: feature:274416-275380:1:exon
so has part: feature:275917-276065:1:exon
so has part: feature:276634-276746:1:exon
so has part: feature:277117-277284:1:exon
so has part: feature:279981-280074:1:exon
so has part: feature:280818-280862:1:exon
so has part: feature:282171-282358:1:exon
so has part: feature:284965-285074:1:exon
so has part: feature:285587-285656:1:exon
so has part: feature:286022-286099:1:exon
so has part: feature:286792-286932:1:exon
so has part: feature:287309-287457:1:exon
so has part: feature:287840-288017:1:exon
so has part: feature:288332-288373:1:exon
so has part: feature:289345-289450:1:exon
so has part: feature:290265-290504:1:exon
so has part: feature:291039-291125:1:exon
so has part: feature:291712-291923:1:exon

position:270859:1
position: 270859
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:270859-271184:1:exon

position:271184:1
position: 271184
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:274416-275380:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:275917-276065:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:276634-276746:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:277117-277284:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:279981-280074:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:280818-280862:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:282171-282358:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:284965-285074:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:285587-285656:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:286022-286099:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:286792-286932:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:287309-287457:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:287840-288017:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:288332-288373:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:289345-289450:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:290265-290504:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:291039-291125:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:291712-291923:1:exon

DENND2C
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8868
gene: DENND2C
product: DENN domain containing 2C, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 9 long SRA reads
transcript id: XM_035561371.2
SIO_010081: DENND2C
subclass of: SO_0000673
so part of: DENND2C
location: join(270859..271184,274416..275380,275917..276065,276634..276746,277117..277284,279981..280074,280818..280862,282171..282358,284965..285074,285587..285674,286022..286099,286792..286932,287309..287457,287840..288017,288332..288373,289345..289450,290265..290504,291039..291125,291712..291920)
location: region:270859-291920:1
so has part: feature:270859-271184:1:exon
so has part: feature:274416-275380:1:exon
so has part: feature:275917-276065:1:exon
so has part: feature:276634-276746:1:exon
so has part: feature:277117-277284:1:exon
so has part: feature:279981-280074:1:exon
so has part: feature:280818-280862:1:exon
so has part: feature:282171-282358:1:exon
so has part: feature:284965-285074:1:exon
so has part: feature:285587-285674:1:exon
so has part: feature:286022-286099:1:exon
so has part: feature:286792-286932:1:exon
so has part: feature:287309-287457:1:exon
so has part: feature:287840-288017:1:exon
so has part: feature:288332-288373:1:exon
so has part: feature:289345-289450:1:exon
so has part: feature:290265-290504:1:exon
so has part: feature:291039-291125:1:exon
so has part: feature:291712-291920:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:270859-271184:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:274416-275380:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:275917-276065:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:276634-276746:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:277117-277284:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:279981-280074:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:280818-280862:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:282171-282358:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:284965-285074:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:285587-285674:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:286022-286099:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:286792-286932:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:287309-287457:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:287840-288017:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:288332-288373:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:289345-289450:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:290265-290504:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:291039-291125:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:291712-291920:1:exon

DENND2C
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8868
gene: DENND2C
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: DENN domain-containing protein 2C isoform X3
translation: MPVVQQDKVVLTGSPCRSDTQGFLETAACFGVSCQLDTCRAQVNLSKAGDGVFISTLALTMHPTGTADGSFSRSAVQTLSRSHCRNIKQKISQWEGRTRGCSSKEKECLKDFGVKYDPGCDVLSKVKPEHTEKGRKAGSKDPKNLGLDFRENAGSCLQTDDHGDLKSCACSLASQAEENGEWQAGFLDPGKALPPGSFYASRGLWRRADAFLPGKAPPVPLDLERKQGSCGSTERELRAEEVDSFCRAERSMKDIYSVAVGQEEEPAAVPPPKPRRTFRYLAEKTASGCSNASATKEASLQKKHGGDSVSSSNNLEKRTASRSIRGRTQRKSFEFEDIQGFRNWMAATSSHKLREETNDTAGSRLIYAQSEDNIYEDIICPTKENPYEDTRVLPLPLWKIPSVWKLPPSRSTSRAPKLPPKPSFLSRKTLELQPSLTNLQGKMVKDTTLPVTFTEWKLFRAAEAASRRKNLPWLVLKVQEIFDSKRGKKRVKLLSPAGRVTPTKGETSGNESDTENQPKNRHRGLLLVQSASKRNPHYQTLERDLIEFQEQQLFELFVVVSLHKKASEIKYTPQIIQQFPNKAEHPFRQSKDTEERLKVIPKFCFPDPKDWFPASQLTSETFSFVLTGEDGSRWFGYCKKLLVSKKLLPEGKGKRLPEVYCIVSRLGCFNLFSKILDEVEKRREMSPALVHPFMRSVMEAPFPAPGRTITVKSFLPGAGNEVMELCRPSDSRLEHVDFECLFKCLSVSHMIRVFASLLLERRVIFVADNLSTLSKCGHAAVAILYPFTWQHTYIPVLPTSMIDIVCSPTPFLIGILSCSLPQLQDLPVEEVLIVDLCADRFLQEVSDEDEILPHKLQAALVQILEERNEILSHEQSCIQGDMPLNSLVSEAFVQFFVEIVGHYSLHMNVTEKGERVFQRELFRKSHMSRNVRHFLHFFMETQMFAGFIQDRELSKNVVKGLFEVRALEFLESVTETEPTGMNKILRSLGSKMKFLQKK
SIO_010081: DENND2C
subclass of: SO_0000673
so part of: DENND2C
location: join(271161..271184,274416..275380,275917..276065,276634..276746,277117..277284,279981..280074,280818..280862,282171..282358,284965..285074,285587..285674,286022..286099,286792..286932,287309..287457,287840..288017,288332..288373,289345..289450,290265..290504,291039..291125,291712..291743)
location: region:271161-291743:1
so has part: feature:271161-271184:1:exon
so has part: feature:274416-275380:1:exon
so has part: feature:275917-276065:1:exon
so has part: feature:276634-276746:1:exon
so has part: feature:277117-277284:1:exon
so has part: feature:279981-280074:1:exon
so has part: feature:280818-280862:1:exon
so has part: feature:282171-282358:1:exon
so has part: feature:284965-285074:1:exon
so has part: feature:285587-285674:1:exon
so has part: feature:286022-286099:1:exon
so has part: feature:286792-286932:1:exon
so has part: feature:287309-287457:1:exon
so has part: feature:287840-288017:1:exon
so has part: feature:288332-288373:1:exon
so has part: feature:289345-289450:1:exon
so has part: feature:290265-290504:1:exon
so has part: feature:291039-291125:1:exon
so has part: feature:291712-291743:1:exon

XP_035417264.1
type: Protein
SIO_000068: ncbiprotein

position:271161:1
position: 271161
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:271161-271184:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:274416-275380:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:275917-276065:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:276634-276746:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:277117-277284:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:279981-280074:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:280818-280862:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:282171-282358:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:284965-285074:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:285587-285674:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:286022-286099:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:286792-286932:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:287309-287457:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:287840-288017:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:288332-288373:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:289345-289450:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:290265-290504:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:291039-291125:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:291712-291743:1:exon

DENND2C
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8868
gene: DENND2C
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: DENN domain-containing protein 2C isoform X5
translation: MPVVQQDKVVLTGSPCRSDTQGFLETAACFGVSCQLDTCRAQVNLSKAGDGVFISTLALTMHPTGTADGSFSRSAVQTLSRSHCRNIKQKISQWEGRTRGCSSKEKECLKDFGVKYDPGCDVLSKVKPEHTEKGRKAGSKDPKNLGLDFRENAGSCLQTDDHGDLKSCACSLASQAEENGEWQAGFLDPGKALPPGSFYASRGLWRRADAFLPGKAPPVPLDLERKQGSCGSTERELRAEEVDSFCRAERSMKDIYSVAVGQEEEPAAVPPPKPRRTFRYLAEKTASGCSNASATKEASLQKKHGGDSVSSSNNLEKRTASRSIRGRTQRKSFEFEDIQGFRNWMAATSSHKLREETNDTAGSRLIYAQSEDNIYEDIICPTKENPYEDTRVLPLPLWKIPSVWKLPPSRSTSRAPKLPPKPSFLSRKTLELQPSLTNLQGKMVKDTTLPVTFTEWKLFRAAEAASRRKNLPWLVLKVQEIFDSKRGKKRVKLLSPAGRVTPTKGETSGNESDTENQPKNRHRGLLLVQSASKRNPHYQTLERDLIEFQEQQLFELFVVVSLHKKASEIKYTPQIIQQFPNKAEHPFRQSKDTEERLKVIPKFCFPDPKDWFPASQLTSETFSFVLTGEDGSRWFGYCKKLLPEGKGKRLPEVYCIVSRLGCFNLFSKILDEVEKRREMSPALVHPFMRSVMEAPFPAPGRTITVKSFLPGAGNEVMELCRPSDSRLEHVDFECLFKCLSVSHMIRVFASLLLERRVIFVADNLSTLSKCGHAAVAILYPFTWQHTYIPVLPTSMIDIVCSPTPFLIGILSCSLPQLQDLPVEEVLIVDLCADRFLQEVSDEDEILPHKLQAALVQILEERNEILSHEQSCIQGDMPLNSLVSEAFVQFFVEIVGHYSLHMNVTEKGERVFQRELFRKSHMSRNVRHFLHFFMETQMFAGFIQDRELSKNVVKGLFEVRALEFLESVTETEPTGMNKILRSLGSKMKFLQKK
SIO_010081: DENND2C
subclass of: SO_0000673
so part of: DENND2C
location: join(271161..271184,274416..275380,275917..276065,276634..276746,277117..277284,279981..280074,280818..280862,282171..282358,284965..285074,285587..285656,286022..286099,286792..286932,287309..287457,287840..288017,288332..288373,289345..289450,290265..290504,291039..291125,291712..291743)
location: region:271161-291743:1
so has part: feature:271161-271184:1:exon
so has part: feature:274416-275380:1:exon
so has part: feature:275917-276065:1:exon
so has part: feature:276634-276746:1:exon
so has part: feature:277117-277284:1:exon
so has part: feature:279981-280074:1:exon
so has part: feature:280818-280862:1:exon
so has part: feature:282171-282358:1:exon
so has part: feature:284965-285074:1:exon
so has part: feature:285587-285656:1:exon
so has part: feature:286022-286099:1:exon
so has part: feature:286792-286932:1:exon
so has part: feature:287309-287457:1:exon
so has part: feature:287840-288017:1:exon
so has part: feature:288332-288373:1:exon
so has part: feature:289345-289450:1:exon
so has part: feature:290265-290504:1:exon
so has part: feature:291039-291125:1:exon
so has part: feature:291712-291743:1:exon

XP_035417266.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:271161-271184:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:274416-275380:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:275917-276065:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:276634-276746:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:277117-277284:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:279981-280074:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:280818-280862:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:282171-282358:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:284965-285074:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:285587-285656:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:286022-286099:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:286792-286932:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:287309-287457:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:287840-288017:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:288332-288373:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:289345-289450:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:290265-290504:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:291039-291125:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:291712-291743:1:exon

DENND2C
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8868
gene: DENND2C
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: DENN domain-containing protein 2C isoform X6
translation: MHPTGTADGSFSRSAVQTLSRSHCRNIKQKISQWEGRTRGCSSKEKECLKDFGVKYDPGCDVLSKVKPEHTEKGRKAGSKDPKNLGLDFRENAGSCLQTDDHGDLKSCACSLASQAEENGEWQAGFLDPGKALPPGSFYASRGLWRRADAFLPGKAPPVPLDLERKQGSCGSTERELRAEEVDSFCRAERSMKDIYSVAVGQEEEPAAVPPPKPRRTFRYLAEKTASGCSNASATKEASLQKKHGGDSVSSSNNLEKRTASRSIRGRTQRKSFEFEDIQGFRNWMAATSSHKLREETNDTAGSRLIYAQSEDNIYEDIICPTKENPYEDTRVLPLPLWKIPSVWKLPPSRSTSRAPKLPPKPSFLSRKTLELQPSLTNLQGKMVKDTTLPVTFTEWKLFRAAEAASRRKNLPWLVLKVQEIFDSKRGKKRVKLLSPAGRVTPTKGETSGNESDTENQPKNRHRGLLLVQSASKRNPHYQTLERDLIEFQEQQLFELFVVVSLHKKASEIKYTPQIIQQFPNKAEHPFRQSKDTEERLKVIPKFCFPDPKDWFPASQLTSETFSFVLTGEDGSRWFGYCKKLLVSKKLLPEGKGKRLPEVYCIVSRLGCFNLFSKILDEVEKRREMSPALVHPFMRSVMEAPFPAPGRTITVKSFLPGAGNEVMELCRPSDSRLEHVDFECLFKCLSVSHMIRVFASLLLERRVIFVADNLSTLSKCGHAAVAILYPFTWQHTYIPVLPTSMIDIVCSPTPFLIGILSCSLPQLQDLPVEEVLIVDLCADRFLQEVSDEDEILPHKLQAALVQILEERNEILSHEQSCIQGDMPLNSLVSEAFVQFFVEIVGHYSLHMNVTEKGERVFQRELFRKSHMSRNVRHFLHFFMETQMFAGFIQDRELSKNVVKGLFEVRALEFLESVTETEPTGMNKILRSLGSKMKFLQKK
SIO_010081: DENND2C
subclass of: SO_0000673
so part of: DENND2C
location: join(274572..275380,275917..276065,276634..276746,277117..277284,279981..280074,280818..280862,282171..282358,284965..285074,285587..285674,286022..286099,286792..286932,287309..287457,287840..288017,288332..288373,289345..289450,290265..290504,291039..291125,291712..291743)
location: region:274572-291743:1
so has part: feature:274572-275380:1:exon
so has part: feature:275917-276065:1:exon
so has part: feature:276634-276746:1:exon
so has part: feature:277117-277284:1:exon
so has part: feature:279981-280074:1:exon
so has part: feature:280818-280862:1:exon
so has part: feature:282171-282358:1:exon
so has part: feature:284965-285074:1:exon
so has part: feature:285587-285674:1:exon
so has part: feature:286022-286099:1:exon
so has part: feature:286792-286932:1:exon
so has part: feature:287309-287457:1:exon
so has part: feature:287840-288017:1:exon
so has part: feature:288332-288373:1:exon
so has part: feature:289345-289450:1:exon
so has part: feature:290265-290504:1:exon
so has part: feature:291039-291125:1:exon
so has part: feature:291712-291743:1:exon

XP_035417267.1
type: Protein
SIO_000068: ncbiprotein

position:274572:1
position: 274572
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:274572-275380:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:275917-276065:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:276634-276746:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:277117-277284:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:279981-280074:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:280818-280862:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:282171-282358:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:284965-285074:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:285587-285674:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:286022-286099:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:286792-286932:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:287309-287457:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:287840-288017:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:288332-288373:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:289345-289450:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:290265-290504:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:291039-291125:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:291712-291743:1:exon

DENND2C
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8868
gene: DENND2C
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: DENN domain-containing protein 2C isoform X6
translation: MHPTGTADGSFSRSAVQTLSRSHCRNIKQKISQWEGRTRGCSSKEKECLKDFGVKYDPGCDVLSKVKPEHTEKGRKAGSKDPKNLGLDFRENAGSCLQTDDHGDLKSCACSLASQAEENGEWQAGFLDPGKALPPGSFYASRGLWRRADAFLPGKAPPVPLDLERKQGSCGSTERELRAEEVDSFCRAERSMKDIYSVAVGQEEEPAAVPPPKPRRTFRYLAEKTASGCSNASATKEASLQKKHGGDSVSSSNNLEKRTASRSIRGRTQRKSFEFEDIQGFRNWMAATSSHKLREETNDTAGSRLIYAQSEDNIYEDIICPTKENPYEDTRVLPLPLWKIPSVWKLPPSRSTSRAPKLPPKPSFLSRKTLELQPSLTNLQGKMVKDTTLPVTFTEWKLFRAAEAASRRKNLPWLVLKVQEIFDSKRGKKRVKLLSPAGRVTPTKGETSGNESDTENQPKNRHRGLLLVQSASKRNPHYQTLERDLIEFQEQQLFELFVVVSLHKKASEIKYTPQIIQQFPNKAEHPFRQSKDTEERLKVIPKFCFPDPKDWFPASQLTSETFSFVLTGEDGSRWFGYCKKLLVSKKLLPEGKGKRLPEVYCIVSRLGCFNLFSKILDEVEKRREMSPALVHPFMRSVMEAPFPAPGRTITVKSFLPGAGNEVMELCRPSDSRLEHVDFECLFKCLSVSHMIRVFASLLLERRVIFVADNLSTLSKCGHAAVAILYPFTWQHTYIPVLPTSMIDIVCSPTPFLIGILSCSLPQLQDLPVEEVLIVDLCADRFLQEVSDEDEILPHKLQAALVQILEERNEILSHEQSCIQGDMPLNSLVSEAFVQFFVEIVGHYSLHMNVTEKGERVFQRELFRKSHMSRNVRHFLHFFMETQMFAGFIQDRELSKNVVKGLFEVRALEFLESVTETEPTGMNKILRSLGSKMKFLQKK
SIO_010081: DENND2C
subclass of: SO_0000673
so part of: DENND2C
location: join(274572..275380,275917..276065,276634..276746,277117..277284,279981..280074,280818..280862,282171..282358,284965..285074,285587..285674,286022..286099,286792..286932,287309..287457,287840..288017,288332..288373,289345..289450,290265..290504,291039..291125,291712..291743)
location: region:274572-291743:1
so has part: feature:274572-275380:1:exon
so has part: feature:275917-276065:1:exon
so has part: feature:276634-276746:1:exon
so has part: feature:277117-277284:1:exon
so has part: feature:279981-280074:1:exon
so has part: feature:280818-280862:1:exon
so has part: feature:282171-282358:1:exon
so has part: feature:284965-285074:1:exon
so has part: feature:285587-285674:1:exon
so has part: feature:286022-286099:1:exon
so has part: feature:286792-286932:1:exon
so has part: feature:287309-287457:1:exon
so has part: feature:287840-288017:1:exon
so has part: feature:288332-288373:1:exon
so has part: feature:289345-289450:1:exon
so has part: feature:290265-290504:1:exon
so has part: feature:291039-291125:1:exon
so has part: feature:291712-291743:1:exon

XP_035417268.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:274572-275380:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:275917-276065:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:276634-276746:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:277117-277284:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:279981-280074:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:280818-280862:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:282171-282358:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:284965-285074:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:285587-285674:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:286022-286099:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:286792-286932:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:287309-287457:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:287840-288017:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:288332-288373:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:289345-289450:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:290265-290504:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:291039-291125:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:291712-291743:1:exon

DENND2C
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8868
gene: DENND2C
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: DENN domain-containing protein 2C isoform X6
translation: MHPTGTADGSFSRSAVQTLSRSHCRNIKQKISQWEGRTRGCSSKEKECLKDFGVKYDPGCDVLSKVKPEHTEKGRKAGSKDPKNLGLDFRENAGSCLQTDDHGDLKSCACSLASQAEENGEWQAGFLDPGKALPPGSFYASRGLWRRADAFLPGKAPPVPLDLERKQGSCGSTERELRAEEVDSFCRAERSMKDIYSVAVGQEEEPAAVPPPKPRRTFRYLAEKTASGCSNASATKEASLQKKHGGDSVSSSNNLEKRTASRSIRGRTQRKSFEFEDIQGFRNWMAATSSHKLREETNDTAGSRLIYAQSEDNIYEDIICPTKENPYEDTRVLPLPLWKIPSVWKLPPSRSTSRAPKLPPKPSFLSRKTLELQPSLTNLQGKMVKDTTLPVTFTEWKLFRAAEAASRRKNLPWLVLKVQEIFDSKRGKKRVKLLSPAGRVTPTKGETSGNESDTENQPKNRHRGLLLVQSASKRNPHYQTLERDLIEFQEQQLFELFVVVSLHKKASEIKYTPQIIQQFPNKAEHPFRQSKDTEERLKVIPKFCFPDPKDWFPASQLTSETFSFVLTGEDGSRWFGYCKKLLVSKKLLPEGKGKRLPEVYCIVSRLGCFNLFSKILDEVEKRREMSPALVHPFMRSVMEAPFPAPGRTITVKSFLPGAGNEVMELCRPSDSRLEHVDFECLFKCLSVSHMIRVFASLLLERRVIFVADNLSTLSKCGHAAVAILYPFTWQHTYIPVLPTSMIDIVCSPTPFLIGILSCSLPQLQDLPVEEVLIVDLCADRFLQEVSDEDEILPHKLQAALVQILEERNEILSHEQSCIQGDMPLNSLVSEAFVQFFVEIVGHYSLHMNVTEKGERVFQRELFRKSHMSRNVRHFLHFFMETQMFAGFIQDRELSKNVVKGLFEVRALEFLESVTETEPTGMNKILRSLGSKMKFLQKK
SIO_010081: DENND2C
subclass of: SO_0000673
so part of: DENND2C
location: join(274572..275380,275917..276065,276634..276746,277117..277284,279981..280074,280818..280862,282171..282358,284965..285074,285587..285674,286022..286099,286792..286932,287309..287457,287840..288017,288332..288373,289345..289450,290265..290504,291039..291125,291712..291743)
location: region:274572-291743:1
so has part: feature:274572-275380:1:exon
so has part: feature:275917-276065:1:exon
so has part: feature:276634-276746:1:exon
so has part: feature:277117-277284:1:exon
so has part: feature:279981-280074:1:exon
so has part: feature:280818-280862:1:exon
so has part: feature:282171-282358:1:exon
so has part: feature:284965-285074:1:exon
so has part: feature:285587-285674:1:exon
so has part: feature:286022-286099:1:exon
so has part: feature:286792-286932:1:exon
so has part: feature:287309-287457:1:exon
so has part: feature:287840-288017:1:exon
so has part: feature:288332-288373:1:exon
so has part: feature:289345-289450:1:exon
so has part: feature:290265-290504:1:exon
so has part: feature:291039-291125:1:exon
so has part: feature:291712-291743:1:exon

XP_035417269.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:274572-275380:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:275917-276065:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:276634-276746:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:277117-277284:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:279981-280074:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:280818-280862:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:282171-282358:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:284965-285074:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:285587-285674:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:286022-286099:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:286792-286932:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:287309-287457:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:287840-288017:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:288332-288373:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:289345-289450:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:290265-290504:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:291039-291125:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:291712-291743:1:exon

DENND2C
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8868
gene: DENND2C
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: DENN domain-containing protein 2C isoform X7
translation: MHPTGTADGSFSRSAVQTLSRSHCRNIKQKISQWEGRTRGCSSKEKECLKDFGVKYDPGCDVLSKVKPEHTEKGRKAGSKDPKNLGLDFRENAGSCLQTDDHGDLKSCACSLASQAEENGEWQAGFLDPGKALPPGSFYASRGLWRRADAFLPGKAPPVPLDLERKQGSCGSTERELRAEEVDSFCRAERSMKDIYSVAVGQEEEPAAVPPPKPRRTFRYLAEKTASGCSNASATKEASLQKKHGGDSVSSSNNLEKRTASRSIRGRTQRKSFEFEDIQGFRNWMAATSSHKLREETNDTAGSRLIYAQSEDNIYEDIICPTKENPYEDTRVLPLPLWKIPSVWKLPPSRSTSRAPKLPPKPSFLSRKTLELQPSLTNLQGKMVKDTTLPVTFTEWKLFRAAEAASRRKNLPWLVLKVQEIFDSKRGKKRVKLLSPAGRVTPTKGETSGNESDTENQPKNRHRGLLLVQSASKRNPHYQTLERDLIEFQEQQLFELFVVVSLHKKASEIKYTPQIIQQFPNKAEHPFRQSKDTEERLKVIPKFCFPDPKDWFPASQLTSETFSFVLTGEDGSRWFGYCKKLLPEGKGKRLPEVYCIVSRLGCFNLFSKILDEVEKRREMSPALVHPFMRSVMEAPFPAPGRTITVKSFLPGAGNEVMELCRPSDSRLEHVDFECLFKCLSVSHMIRVFASLLLERRVIFVADNLSTLSKCGHAAVAILYPFTWQHTYIPVLPTSMIDIVCSPTPFLIGILSCSLPQLQDLPVEEVLIVDLCADRFLQEVSDEDEILPHKLQAALVQILEERNEILSHEQSCIQGDMPLNSLVSEAFVQFFVEIVGHYSLHMNVTEKGERVFQRELFRKSHMSRNVRHFLHFFMETQMFAGFIQDRELSKNVVKGLFEVRALEFLESVTETEPTGMNKILRSLGSKMKFLQKK
SIO_010081: DENND2C
subclass of: SO_0000673
so part of: DENND2C
location: join(274572..275380,275917..276065,276634..276746,277117..277284,279981..280074,280818..280862,282171..282358,284965..285074,285587..285656,286022..286099,286792..286932,287309..287457,287840..288017,288332..288373,289345..289450,290265..290504,291039..291125,291712..291743)
location: region:274572-291743:1
so has part: feature:274572-275380:1:exon
so has part: feature:275917-276065:1:exon
so has part: feature:276634-276746:1:exon
so has part: feature:277117-277284:1:exon
so has part: feature:279981-280074:1:exon
so has part: feature:280818-280862:1:exon
so has part: feature:282171-282358:1:exon
so has part: feature:284965-285074:1:exon
so has part: feature:285587-285656:1:exon
so has part: feature:286022-286099:1:exon
so has part: feature:286792-286932:1:exon
so has part: feature:287309-287457:1:exon
so has part: feature:287840-288017:1:exon
so has part: feature:288332-288373:1:exon
so has part: feature:289345-289450:1:exon
so has part: feature:290265-290504:1:exon
so has part: feature:291039-291125:1:exon
so has part: feature:291712-291743:1:exon

XP_050571268.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:274572-275380:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:275917-276065:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:276634-276746:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:277117-277284:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:279981-280074:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:280818-280862:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:282171-282358:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:284965-285074:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:285587-285656:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:286022-286099:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:286792-286932:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:287309-287457:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:287840-288017:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:288332-288373:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:289345-289450:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:290265-290504:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:291039-291125:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:291712-291743:1:exon

BCAS2
type: Gene
subclass of: SO_0000704
RO_0002162: 8868
gene: BCAS2
note: BCAS2 pre-mRNA processing factor; Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 291996..295721
location: region:291996-295721:1
so has part: feature:291996-295721:1:exon
subclass of: SO_0000010

118255299
type: Gene
SIO_000068: ncbigene

position:291996:1
position: 291996
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:295721:1
position: 295721
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:291996-295721:1:exon

BCAS2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8868
gene: BCAS2
product: BCAS2 pre-mRNA processing factor
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_035561382.2
SIO_010081: BCAS2
subclass of: SO_0000673
so part of: BCAS2
location: join(291996..292142,292206..292298,292375..292445,292516..292677,293737..293787,294866..294946,295513..295721)
location: region:291996-295721:1
so has part: feature:291996-292142:1:exon
so has part: feature:292206-292298:1:exon
so has part: feature:292375-292445:1:exon
so has part: feature:292516-292677:1:exon
so has part: feature:293737-293787:1:exon
so has part: feature:294866-294946:1:exon
so has part: feature:295513-295721:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:291996-292142:1:exon

position:292142:1
position: 292142
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:292206-292298:1:exon

position:292206:1
position: 292206
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:292298:1
position: 292298
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:292375-292445:1:exon

position:292375:1
position: 292375
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:292445:1
position: 292445
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:292516-292677:1:exon

position:292516:1
position: 292516
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:292677:1
position: 292677
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:293737-293787:1:exon

position:293737:1
position: 293737
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:293787:1
position: 293787
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:294866-294946:1:exon

position:294866:1
position: 294866
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:294946:1
position: 294946
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:295513-295721:1:exon

position:295513:1
position: 295513
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

BCAS2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8868
gene: BCAS2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: pre-mRNA-splicing factor SPF27
translation: MAGPGLVAGDVVVDALPYFDQGYEAPGVREAAAALVEEETRRYRPTKNYLSYLPAQDYSAFETEIMRNEFERLAARQPLELLSMKRYELPAPSSGQKNDITAWQECVNNSMAQLEHQAVRIENLELMSQHGCNAWKVYNEHLVHMIEQAQKELQKLRKNIQDLNWQRKNMQLTAGAKLREMESTWVSLVSKNYEIERTIVQLENEISQIKQQQGEANKENIQQQDF
SIO_010081: BCAS2
subclass of: SO_0000673
so part of: BCAS2
location: join(292050..292142,292206..292298,292375..292445,292516..292677,293737..293787,294866..294946,295513..295642)
location: region:292050-295642:1
so has part: feature:292050-292142:1:exon
so has part: feature:292206-292298:1:exon
so has part: feature:292375-292445:1:exon
so has part: feature:292516-292677:1:exon
so has part: feature:293737-293787:1:exon
so has part: feature:294866-294946:1:exon
so has part: feature:295513-295642:1:exon

XP_035417275.1
type: Protein
SIO_000068: ncbiprotein

position:292050:1
position: 292050
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:295642:1
position: 295642
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:292050-292142:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:292206-292298:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:292375-292445:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:292516-292677:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:293737-293787:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:294866-294946:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:295513-295642:1:exon

TRIM33
type: Gene
subclass of: SO_0000704
RO_0002162: 8868
gene: TRIM33
note: tripartite motif containing 33; Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 296094..337119
location: region:296094-337119:1
so has part: feature:296094-337119:1:exon
subclass of: SO_0000010

118255401
type: Gene
SIO_000068: ncbigene

position:296094:1
position: 296094
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:337119:1
position: 337119
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:296094-337119:1:exon

TRIM33
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8868
gene: TRIM33
product: tripartite motif containing 33
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 7 long SRA reads, 8 Proteins
transcript id: XM_035561569.2
SIO_010081: TRIM33
subclass of: SO_0000673
so part of: TRIM33
location: join(296094..296544,308892..309010,309117..309264,311413..311545,314317..314433,317077..317191,318403..318549,319045..319162,321227..321471,321711..321875,322723..322923,324785..324917,325963..326026,326315..326474,327538..327884,328394..328517,329471..329545,330155..330307,331951..332001,332084..337119)
location: region:296094-337119:1
so has part: feature:296094-296544:1:exon
so has part: feature:308892-309010:1:exon
so has part: feature:309117-309264:1:exon
so has part: feature:311413-311545:1:exon
so has part: feature:314317-314433:1:exon
so has part: feature:317077-317191:1:exon
so has part: feature:318403-318549:1:exon
so has part: feature:319045-319162:1:exon
so has part: feature:321227-321471:1:exon
so has part: feature:321711-321875:1:exon
so has part: feature:322723-322923:1:exon
so has part: feature:324785-324917:1:exon
so has part: feature:325963-326026:1:exon
so has part: feature:326315-326474:1:exon
so has part: feature:327538-327884:1:exon
so has part: feature:328394-328517:1:exon
so has part: feature:329471-329545:1:exon
so has part: feature:330155-330307:1:exon
so has part: feature:331951-332001:1:exon
so has part: feature:332084-337119:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:296094-296544:1:exon

position:296544:1
position: 296544
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:308892-309010:1:exon

position:308892:1
position: 308892
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:309010:1
position: 309010
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:309117-309264:1:exon

position:309117:1
position: 309117
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:309264:1
position: 309264
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:311413-311545:1:exon

position:311413:1
position: 311413
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:311545:1
position: 311545
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:314317-314433:1:exon

position:314317:1
position: 314317
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:314433:1
position: 314433
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:317077-317191:1:exon

position:317077:1
position: 317077
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:317191:1
position: 317191
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:318403-318549:1:exon

position:318403:1
position: 318403
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:318549:1
position: 318549
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:319045-319162:1:exon

position:319045:1
position: 319045
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:319162:1
position: 319162
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:321227-321471:1:exon

position:321227:1
position: 321227
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:321471:1
position: 321471
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:321711-321875:1:exon

position:321711:1
position: 321711
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:321875:1
position: 321875
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:322723-322923:1:exon

position:322723:1
position: 322723
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:322923:1
position: 322923
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:324785-324917:1:exon

position:324785:1
position: 324785
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:324917:1
position: 324917
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:325963-326026:1:exon

position:325963:1
position: 325963
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:326026:1
position: 326026
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:326315-326474:1:exon

position:326315:1
position: 326315
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:326474:1
position: 326474
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:327538-327884:1:exon

position:327538:1
position: 327538
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:327884:1
position: 327884
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:328394-328517:1:exon

position:328394:1
position: 328394
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:328517:1
position: 328517
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:329471-329545:1:exon

position:329471:1
position: 329471
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:329545:1
position: 329545
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:330155-330307:1:exon

position:330155:1
position: 330155
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:330307:1
position: 330307
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:331951-332001:1:exon

position:331951:1
position: 331951
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:332001:1
position: 332001
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:332084-337119:1:exon

position:332084:1
position: 332084
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

TRIM33
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8868
gene: TRIM33
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: E3 ubiquitin-protein ligase TRIM33
translation: MAENKGGGGGGDGAAEAGPGGGCGPEPVAASPSGAAPPAPAAAPPEERESPGAAAAAERALGEAEAEAAAGPGAVPGPGPSPVPPLTPAAPGPFSLLDTCAVCAQSLQSRREAEPKLLPCLHSFCRRCLPEPERQLSVPVPGGANGDIQQVGVIRCPICRQECRQIDLVDNYFVKDTSETPSSSDEKSEQVCTSCEDNASAVGFCVECGEWLCKTCIEAHQRVKFTKDHMIRKKEDVSSEAVGASGQRPVFCPVHKQEQLKLFCETCDRLTCRDCQLLEHKEHRYQFLEEAFQNQKGAIENLLAKLLEKKNYVNFAATQVQNRIKEVNETNKRVEQEIKVAIFTLINEINKKGKSLLQHLENVTKERQMKLIQQQNDITGLSRQVKHVMNFTNWAIASGSSTALLYSKRLITFQLRHILKARCDPVPAANGAIRFHCDPTFWAKNVVNLGNLVIENKPTPSYTPNVVVGQAPPGTNHVSKTPGQINLAQLRLQHMQQQVYAQKHQQLQQMRMGQPSGSVPRQTGPQILQQQPPRLISMQTMQRGNMNCGAFQAHQMRMAQNAARIPGIPRHNGPQYSMMQPHLQRQHSNPGHAGPFPVVSVHNNTINPTSPTTATMASANRGPTSPSVTAIELIPSVTNPENLPSLPDIPPIQLEDAGSSSLDNLLSRYITGSHLPPQPTSTMNPSPGPSALSPGSSGLSNSHTPVRPPSTSSTGSRGSCGSSGRTAEKTSVNFKSDQVKVKQEPGTEEEICSFSGTVKQEKTEDGRRSACMLSSPESSLTPPLSTNLHLESELEALGSLENHVKTEPGDLSESCKQSGHSLLNGKSPMRSLMHRSARIGGEGNNKDDDPNEDWCAVCQNGGDLLCCEKCPKVFHLTCHVPTLLSFPSGEWICTFCRDLSKPEVEYDCDNSQHSKKGKTAQGLSPVDQRKCERLLLYLYCHELSIEFQEPVPASIPNYYKIIKKPMDLSTVKKKLQKKHSQHYQTPEDFVADVRLIFKNCERFNEMMKVVQVYAETQEINLKADSEVAQAGKAVALYFEDKLTEIYPDRTFQPLPEFEQEEDDGEITEDSDEDFIQPRRKRLKSDERPVHIK
SIO_010081: TRIM33
subclass of: SO_0000673
so part of: TRIM33
location: join(296094..296544,308892..309010,309117..309264,311413..311545,314317..314433,317077..317191,318403..318549,319045..319162,321227..321471,321711..321875,322723..322923,324785..324917,325963..326026,326315..326474,327538..327884,328394..328517,329471..329545,330155..330307,331951..332001,332084..332296)
location: region:296094-332296:1
so has part: feature:296094-296544:1:exon
so has part: feature:308892-309010:1:exon
so has part: feature:309117-309264:1:exon
so has part: feature:311413-311545:1:exon
so has part: feature:314317-314433:1:exon
so has part: feature:317077-317191:1:exon
so has part: feature:318403-318549:1:exon
so has part: feature:319045-319162:1:exon
so has part: feature:321227-321471:1:exon
so has part: feature:321711-321875:1:exon
so has part: feature:322723-322923:1:exon
so has part: feature:324785-324917:1:exon
so has part: feature:325963-326026:1:exon
so has part: feature:326315-326474:1:exon
so has part: feature:327538-327884:1:exon
so has part: feature:328394-328517:1:exon
so has part: feature:329471-329545:1:exon
so has part: feature:330155-330307:1:exon
so has part: feature:331951-332001:1:exon
so has part: feature:332084-332296:1:exon

XP_035417462.1
type: Protein
SIO_000068: ncbiprotein

position:332296:1
position: 332296
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:296094-296544:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:308892-309010:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:309117-309264:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:311413-311545:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:314317-314433:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:317077-317191:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:318403-318549:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:319045-319162:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:321227-321471:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:321711-321875:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:322723-322923:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:324785-324917:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:325963-326026:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:326315-326474:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:327538-327884:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:328394-328517:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:329471-329545:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:330155-330307:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:331951-332001:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:332084-332296:1:exon

SYT6
type: Gene
subclass of: SO_0000704
RO_0002162: 8868
gene: SYT6
note: synaptotagmin 6; Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 348329..385385
location: region:348329-385385:1
so has part: feature:348329-385385:1:exon
subclass of: SO_0000010

118255333
type: Gene
SIO_000068: ncbigene

position:348329:1
position: 348329
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:385385:1
position: 385385
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:348329-385385:1:exon

SYT6
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8868
gene: SYT6
product: synaptotagmin 6
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 18 Proteins
transcript id: XM_035561433.2
SIO_010081: SYT6
subclass of: SO_0000673
so part of: SYT6
location: join(348329..348409,348509..348713,369107..369443,371276..371834,377751..377871,379156..379327,379990..380140,385314..385385)
location: region:348329-385385:1
so has part: feature:348329-348409:1:exon
so has part: feature:348509-348713:1:exon
so has part: feature:369107-369443:1:exon
so has part: feature:371276-371834:1:exon
so has part: feature:377751-377871:1:exon
so has part: feature:379156-379327:1:exon
so has part: feature:379990-380140:1:exon
so has part: feature:385314-385385:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:348329-348409:1:exon

position:348409:1
position: 348409
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:348509-348713:1:exon

position:348509:1
position: 348509
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:348713:1
position: 348713
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:369107-369443:1:exon

position:369107:1
position: 369107
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:369443:1
position: 369443
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:371276-371834:1:exon

position:371276:1
position: 371276
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:371834:1
position: 371834
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:377751-377871:1:exon

position:377751:1
position: 377751
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:377871:1
position: 377871
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:379156-379327:1:exon

position:379156:1
position: 379156
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:379327:1
position: 379327
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:379990-380140:1:exon

position:379990:1
position: 379990
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:380140:1
position: 380140
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:385314-385385:1:exon

position:385314:1
position: 385314
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

SYT6
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8868
gene: SYT6
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: synaptotagmin-6
translation: MLRRFDFLRQPGGTAEDAVWEMSGTRDDSRCQKAVHIVSGLCRKKSLPSLDLDVCREFLLLPSDQSLSISEPELSVSLLAVIVVVCGLALVAVFLFLFWKLCWVPWRNKAISSNLAVLQSEAACNKENMADKLKDTGTISFLEAAVKISHTSPDIPAEVQMSMKDHIMRRTRIQRQTTEPASSTRHISFKRHLPRQMHVSSMDYGMDPPAVAEQPTSIGRIKPELYKQKSVDSEDPKKETAKTCGKINFTLKYDYENETLTVRILRAFDLPAKDFCGSSDPYVKIYLLPDRKRKFQTRVHRKTLNPTFDESFHFPVPHEELASRKLHLSVFDFDRFSRHDMIGEVILENLFEASDLSRETSIWKDIQYATTESVDLGEIMFSLCYLPTAGRLTLTVIKCRNLKAMDITGYSDPYVKVSLLCDGRRLKKKKTTIKKNTLNPTYNEAIIFDIPPENMDQVSLLISVMDYDRVGHNEIIGVCRVGVNAEGLGRDHWNEMLAYPRKPIAHWHPLVEVKKSFKEWQGRAASFDSQGSCPSPKPPPTP
SIO_010081: SYT6
subclass of: SO_0000673
so part of: SYT6
location: join(348398..348409,348509..348713,369107..369443,371276..371834,377751..377871,379156..379327,379990..380140,385314..385385)
location: region:348398-385385:1
so has part: feature:348398-348409:1:exon
so has part: feature:348509-348713:1:exon
so has part: feature:369107-369443:1:exon
so has part: feature:371276-371834:1:exon
so has part: feature:377751-377871:1:exon
so has part: feature:379156-379327:1:exon
so has part: feature:379990-380140:1:exon
so has part: feature:385314-385385:1:exon

XP_035417326.1
type: Protein
SIO_000068: ncbiprotein

position:348398:1
position: 348398
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:348398-348409:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:348509-348713:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:369107-369443:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:371276-371834:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:377751-377871:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:379156-379327:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:379990-380140:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:385314-385385:1:exon

OLFML3
type: Gene
subclass of: SO_0000704
RO_0002162: 8868
gene: OLFML3
note: olfactomedin like 3; Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(398920..401377)
location: region:398920-401377:-1
so has part: feature:398920-401377:-1:exon
subclass of: SO_0000010

118255427
type: Gene
SIO_000068: ncbigene

position:398920:-1
position: 398920
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:401377:-1
position: 401377
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:398920-401377:-1:exon

OLFML3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8868
gene: OLFML3
product: olfactomedin like 3
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_035561606.2
SIO_010081: OLFML3
subclass of: SO_0000673
so part of: OLFML3
location: complement(join(398920..399984,400419..400704,401009..401377))
location: region:398920-401377:-1
so has part: feature:401009-401377:-1:exon
so has part: feature:400419-400704:-1:exon
so has part: feature:398920-399984:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:401009-401377:-1:exon

position:401009:-1
position: 401009
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:400419-400704:-1:exon

position:400419:-1
position: 400419
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:400704:-1
position: 400704
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:398920-399984:-1:exon

position:399984:-1
position: 399984
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

OLFML3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8868
gene: OLFML3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: olfactomedin-like protein 3
translation: MGPWRCCLLLLPLLAAAPRAQQQQFMEYVERRLALLEERISQWHDQSSRYSTELRDFKNQVLGMLETAEKEREALRSEAEGAAVRVDRLEREVDYLETQNPAPPCVEVDETLMEKQVATAKQRKNEKYTKLTDCSDTIASVRAMKILKRFGSTSGLWTKDAAGNSEKIYVFDGTANDTVYVFPRMREFTLFSATRKAARIKLPYPWVGTGHLVYDGHLYYIRQQGPFQVIKFNLANKTVVDSSVFPAEEQIPVFGLSPFTYIEMAADEEGLWAIYATKENEKNICLAKLDPTSLDIEQMWDTPCPRENAEGAFVVCGALHVAYNTRLPSRSRVQCVFDVSGTLAPEDASLVYFPKRYGSHSSMKYSPRERQIYAWDDGYQIIYRMEMKKKLEV
SIO_010081: OLFML3
subclass of: SO_0000673
so part of: OLFML3
location: complement(join(399200..399984,400419..400704,401009..401119))
location: region:399200-401119:-1
so has part: feature:401009-401119:-1:exon
so has part: feature:400419-400704:-1:exon
so has part: feature:399200-399984:-1:exon

XP_035417499.1
type: Protein
SIO_000068: ncbiprotein

position:399200:-1
position: 399200
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:401119:-1
position: 401119
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:401009-401119:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:400419-400704:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:399200-399984:-1:exon

HIPK1
type: Gene
subclass of: SO_0000704
RO_0002162: 8868
gene: HIPK1
note: homeodomain interacting protein kinase 1; Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(402047..429149)
location: region:402047-429149:-1
so has part: feature:402047-429149:-1:exon
subclass of: SO_0000010

118255253
type: Gene
SIO_000068: ncbigene

position:402047:-1
position: 402047
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:429149:-1
position: 429149
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:402047-429149:-1:exon

HIPK1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8868
gene: HIPK1
product: homeodomain interacting protein kinase 1, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 36 long SRA reads, 2 Proteins
transcript id: XM_035561314.2
SIO_010081: HIPK1
subclass of: SO_0000673
so part of: HIPK1
location: complement(join(402047..406668,407652..407788,408174..408412,408676..408891,409438..409620,409808..409950,414156..414277,415159..415381,415708..415870,416105..416289,417151..417237,419176..419295,420905..421028,427225..428302,429015..429149))
location: region:402047-429149:-1
so has part: feature:429015-429149:-1:exon
so has part: feature:427225-428302:-1:exon
so has part: feature:420905-421028:-1:exon
so has part: feature:419176-419295:-1:exon
so has part: feature:417151-417237:-1:exon
so has part: feature:416105-416289:-1:exon
so has part: feature:415708-415870:-1:exon
so has part: feature:415159-415381:-1:exon
so has part: feature:414156-414277:-1:exon
so has part: feature:409808-409950:-1:exon
so has part: feature:409438-409620:-1:exon
so has part: feature:408676-408891:-1:exon
so has part: feature:408174-408412:-1:exon
so has part: feature:407652-407788:-1:exon
so has part: feature:402047-406668:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:429015-429149:-1:exon

position:429015:-1
position: 429015
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:427225-428302:-1:exon

position:427225:-1
position: 427225
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:428302:-1
position: 428302
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:420905-421028:-1:exon

position:420905:-1
position: 420905
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:421028:-1
position: 421028
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:419176-419295:-1:exon

position:419176:-1
position: 419176
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:419295:-1
position: 419295
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:417151-417237:-1:exon

position:417151:-1
position: 417151
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:417237:-1
position: 417237
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:416105-416289:-1:exon

position:416105:-1
position: 416105
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:416289:-1
position: 416289
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:415708-415870:-1:exon

position:415708:-1
position: 415708
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:415870:-1
position: 415870
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:415159-415381:-1:exon

position:415159:-1
position: 415159
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:415381:-1
position: 415381
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:414156-414277:-1:exon

position:414156:-1
position: 414156
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:414277:-1
position: 414277
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:409808-409950:-1:exon

position:409808:-1
position: 409808
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:409950:-1
position: 409950
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:409438-409620:-1:exon

position:409438:-1
position: 409438
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:409620:-1
position: 409620
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:408676-408891:-1:exon

position:408676:-1
position: 408676
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:408891:-1
position: 408891
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:408174-408412:-1:exon

position:408174:-1
position: 408174
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:408412:-1
position: 408412
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:407652-407788:-1:exon

position:407652:-1
position: 407652
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:407788:-1
position: 407788
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:402047-406668:-1:exon

position:406668:-1
position: 406668
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

HIPK1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8868
gene: HIPK1
product: homeodomain interacting protein kinase 1, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 42 long SRA reads
transcript id: XM_035561313.2
SIO_010081: HIPK1
subclass of: SO_0000673
so part of: HIPK1
location: complement(join(402048..406668,407652..407788,408174..408412,408676..408891,409438..409620,409808..409947,412507..412641,414156..414277,415159..415381,415708..415870,416105..416289,417151..417237,419176..419295,420905..421028,427225..428302,429015..429149))
location: region:402048-429149:-1
so has part: feature:429015-429149:-1:exon
so has part: feature:427225-428302:-1:exon
so has part: feature:420905-421028:-1:exon
so has part: feature:419176-419295:-1:exon
so has part: feature:417151-417237:-1:exon
so has part: feature:416105-416289:-1:exon
so has part: feature:415708-415870:-1:exon
so has part: feature:415159-415381:-1:exon
so has part: feature:414156-414277:-1:exon
so has part: feature:412507-412641:-1:exon
so has part: feature:409808-409947:-1:exon
so has part: feature:409438-409620:-1:exon
so has part: feature:408676-408891:-1:exon
so has part: feature:408174-408412:-1:exon
so has part: feature:407652-407788:-1:exon
so has part: feature:402048-406668:-1:exon

position:402048:-1
position: 402048
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:429015-429149:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:427225-428302:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:420905-421028:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:419176-419295:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:417151-417237:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:416105-416289:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:415708-415870:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:415159-415381:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:414156-414277:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:412507-412641:-1:exon

position:412507:-1
position: 412507
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:412641:-1
position: 412641
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:409808-409947:-1:exon

position:409947:-1
position: 409947
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:409438-409620:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:408676-408891:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:408174-408412:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:407652-407788:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:402048-406668:-1:exon

HIPK1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8868
gene: HIPK1
product: homeodomain interacting protein kinase 1, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 95 long SRA reads
transcript id: XM_035561312.2
SIO_010081: HIPK1
subclass of: SO_0000673
so part of: HIPK1
location: complement(join(402049..406668,407652..407788,408174..408412,408676..408891,409438..409620,409808..409950,412507..412641,414156..414277,415159..415381,415708..415870,416105..416289,417151..417237,419176..419295,420905..421028,427225..428302,429015..429149))
location: region:402049-429149:-1
so has part: feature:429015-429149:-1:exon
so has part: feature:427225-428302:-1:exon
so has part: feature:420905-421028:-1:exon
so has part: feature:419176-419295:-1:exon
so has part: feature:417151-417237:-1:exon
so has part: feature:416105-416289:-1:exon
so has part: feature:415708-415870:-1:exon
so has part: feature:415159-415381:-1:exon
so has part: feature:414156-414277:-1:exon
so has part: feature:412507-412641:-1:exon
so has part: feature:409808-409950:-1:exon
so has part: feature:409438-409620:-1:exon
so has part: feature:408676-408891:-1:exon
so has part: feature:408174-408412:-1:exon
so has part: feature:407652-407788:-1:exon
so has part: feature:402049-406668:-1:exon

position:402049:-1
position: 402049
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:429015-429149:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:427225-428302:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:420905-421028:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:419176-419295:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:417151-417237:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:416105-416289:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:415708-415870:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:415159-415381:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:414156-414277:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:412507-412641:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:409808-409950:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:409438-409620:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:408676-408891:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:408174-408412:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:407652-407788:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:402049-406668:-1:exon

HIPK1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8868
gene: HIPK1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: homeodomain-interacting protein kinase 1 isoform X3
translation: MASQLQVFSPPSVSSSAFCSAKKLKVEPTVWDVSGQSSSDKYYTHSKNLPAAQGQASSSHQVANFSVPAYDQNLLLPAPSVEHIVVTAADSTGSSATASFQNSQTLTHRSNLSLLEPYQKCGLKRKSEEVDSNGSVQIIEEHPPLMLQNRPAVGAAATTTTVTTKSSSSSGEGDYQLVQHEILCSMTNSYEVLEFLGRGTFGQVAKCWKRSTKEIVAIKILKNHPSYARQGQIEVSILSRLSSENADEYNFVRSYECFQHKNHTCLVFEMLEQNLYDFLKQNKFSPLPLKYIRPILQQVATALMKLKSLGLIHADLKPENIMLVDPARQPYRVKVIDFGSASHVSKAVCSTYLQSRYYRAPEIILGLPFCEAIDMWSLGCVIAELFLGWPLYPGASEYDQIRYISQTQGLPAEYLLSAGTKTSRFFNRDPNLGYPLWRLKTPEEHELETGIKSKEARKYIFNCLDDMAQVNMSTDLEGTDMLAEKADRREYIDLLKKMLTIDADKRITPLKTLNHPFVTMTHLLDFPHSNHVKSCFQNMEICKRRVNMYDTVNQIKSPFTTHVAPNTSTNLTMSFNNQLNTVHNQASVLASNSTAAATLSLANSDVSLLNYQSALYPSSAAPVAGVAQQSVSLQPGTTQICTQTDPFQQTFIVCPPAFQTGLQATTKHSGFPVRMENAVPIVPQAPAAQPLQIQSGVLTQQAWPGGTQQILLPSTWQQLPGVALHNSVQPAAVIPETIGGGQQLADWRNAHSHGNQYSTLMQQPSLLTNHVTLATAQPLNVGVAHVVRQQQNSNVPAKKNKQPAPSAAKPSTTLETVPTQVYSLIGSSPLRSTSSSSNVLVPVQEQHQPIVIPDTPSPPVSVITIRSDTDEEEDSKYKPASLGMKQRSNVISYVTVNDSPDSDSSLNSPYATDPLSSLRSTGGALELPSRGASDSSNSRTIIVPPLKTQLNDCIVATQSSGILSGTSKTKPVASVSGQSSGCCITPTGYRSHRVVTNGVQPLNLSQNQQTTVLASQERSGNAGPRRQQAYVAPLTSTISQAPYTFQHSSPVHPHLAAATANAHLSSQPHMYTYAPTTAAPLGSTTSIAHLFSPQGSSRHTQYAAHPSTLVHQVPVSVGPSLLTSANVPPAQYQHQFAPQSYIGASRGSAIYTGYPLSPTKINQYSYL
SIO_010081: HIPK1
subclass of: SO_0000673
so part of: HIPK1
location: complement(join(406183..406668,407652..407788,408174..408412,408676..408891,409438..409620,409808..409950,414156..414277,415159..415381,415708..415870,416105..416289,417151..417237,419176..419295,420905..421028,427225..428300))
location: region:406183-428300:-1
so has part: feature:427225-428300:-1:exon
so has part: feature:420905-421028:-1:exon
so has part: feature:419176-419295:-1:exon
so has part: feature:417151-417237:-1:exon
so has part: feature:416105-416289:-1:exon
so has part: feature:415708-415870:-1:exon
so has part: feature:415159-415381:-1:exon
so has part: feature:414156-414277:-1:exon
so has part: feature:409808-409950:-1:exon
so has part: feature:409438-409620:-1:exon
so has part: feature:408676-408891:-1:exon
so has part: feature:408174-408412:-1:exon
so has part: feature:407652-407788:-1:exon
so has part: feature:406183-406668:-1:exon

XP_035417207.1
type: Protein
SIO_000068: ncbiprotein

position:406183:-1
position: 406183
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:428300:-1
position: 428300
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:427225-428300:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:420905-421028:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:419176-419295:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:417151-417237:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:416105-416289:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:415708-415870:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:415159-415381:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:414156-414277:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:409808-409950:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:409438-409620:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:408676-408891:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:408174-408412:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:407652-407788:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:406183-406668:-1:exon

HIPK1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8868
gene: HIPK1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: homeodomain-interacting protein kinase 1 isoform X2
translation: MASQLQVFSPPSVSSSAFCSAKKLKVEPTVWDVSGQSSSDKYYTHSKNLPAAQGQASSSHQVANFSVPAYDQNLLLPAPSVEHIVVTAADSTGSSATASFQNSQTLTHRSNLSLLEPYQKCGLKRKSEEVDSNGSVQIIEEHPPLMLQNRPAVGAAATTTTVTTKSSSSSGEGDYQLVQHEILCSMTNSYEVLEFLGRGTFGQVAKCWKRSTKEIVAIKILKNHPSYARQGQIEVSILSRLSSENADEYNFVRSYECFQHKNHTCLVFEMLEQNLYDFLKQNKFSPLPLKYIRPILQQVATALMKLKSLGLIHADLKPENIMLVDPARQPYRVKVIDFGSASHVSKAVCSTYLQSRYYRAPEIILGLPFCEAIDMWSLGCVIAELFLGWPLYPGASEYDQIRYISQTQGLPAEYLLSAGTKTSRFFNRDPNLGYPLWRLKTPEEHELETGIKSKEARKYIFNCLDDMAQVNMSTDLEGTDMLAEKADRREYIDLLKKMLTIDADKRITPLKTLNHPFVTMTHLLDFPHSNHVKSCFQNMEICKRRVNMYDTVNQIKSPFTTHVAPNTSTNLTMSFNNQLNTVHNQASVLASNSTAAATLSLANSDVSLLNYQSALYPSSAAPVAGVAQQSVSLQPGTTQICTQTDPFQQTFIVCPPAFQTGLQATTKHSGFPVRMENAVPIVPQAPAAQPLQIQSGVLTQGSCTPLMVATLHPQVATITPQYAVPFTLNCAAGRPALVEQTAAVLAWPGGTQQILLPSTWQQLPGVALHNSVQPAAVIPETIGGGQQLADWRNAHSHGNQYSTLMQQPSLLTNHVTLATAQPLNVGVAHVVRQQQNSNVPAKKNKQPAPSAAKPSTTLETVPTQVYSLIGSSPLRSTSSSSNVLVPVQEQHQPIVIPDTPSPPVSVITIRSDTDEEEDSKYKPASLGMKQRSNVISYVTVNDSPDSDSSLNSPYATDPLSSLRSTGGALELPSRGASDSSNSRTIIVPPLKTQLNDCIVATQSSGILSGTSKTKPVASVSGQSSGCCITPTGYRSHRVVTNGVQPLNLSQNQQTTVLASQERSGNAGPRRQQAYVAPLTSTISQAPYTFQHSSPVHPHLAAATANAHLSSQPHMYTYAPTTAAPLGSTTSIAHLFSPQGSSRHTQYAAHPSTLVHQVPVSVGPSLLTSANVPPAQYQHQFAPQSYIGASRGSAIYTGYPLSPTKINQYSYL
SIO_010081: HIPK1
subclass of: SO_0000673
so part of: HIPK1
location: complement(join(406183..406668,407652..407788,408174..408412,408676..408891,409438..409620,409808..409947,412507..412641,414156..414277,415159..415381,415708..415870,416105..416289,417151..417237,419176..419295,420905..421028,427225..428300))
location: region:406183-428300:-1
so has part: feature:427225-428300:-1:exon
so has part: feature:420905-421028:-1:exon
so has part: feature:419176-419295:-1:exon
so has part: feature:417151-417237:-1:exon
so has part: feature:416105-416289:-1:exon
so has part: feature:415708-415870:-1:exon
so has part: feature:415159-415381:-1:exon
so has part: feature:414156-414277:-1:exon
so has part: feature:412507-412641:-1:exon
so has part: feature:409808-409947:-1:exon
so has part: feature:409438-409620:-1:exon
so has part: feature:408676-408891:-1:exon
so has part: feature:408174-408412:-1:exon
so has part: feature:407652-407788:-1:exon
so has part: feature:406183-406668:-1:exon

XP_035417206.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:427225-428300:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:420905-421028:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:419176-419295:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:417151-417237:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:416105-416289:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:415708-415870:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:415159-415381:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:414156-414277:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:412507-412641:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:409808-409947:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:409438-409620:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:408676-408891:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:408174-408412:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:407652-407788:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:406183-406668:-1:exon

HIPK1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8868
gene: HIPK1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: homeodomain-interacting protein kinase 1 isoform X1
translation: MASQLQVFSPPSVSSSAFCSAKKLKVEPTVWDVSGQSSSDKYYTHSKNLPAAQGQASSSHQVANFSVPAYDQNLLLPAPSVEHIVVTAADSTGSSATASFQNSQTLTHRSNLSLLEPYQKCGLKRKSEEVDSNGSVQIIEEHPPLMLQNRPAVGAAATTTTVTTKSSSSSGEGDYQLVQHEILCSMTNSYEVLEFLGRGTFGQVAKCWKRSTKEIVAIKILKNHPSYARQGQIEVSILSRLSSENADEYNFVRSYECFQHKNHTCLVFEMLEQNLYDFLKQNKFSPLPLKYIRPILQQVATALMKLKSLGLIHADLKPENIMLVDPARQPYRVKVIDFGSASHVSKAVCSTYLQSRYYRAPEIILGLPFCEAIDMWSLGCVIAELFLGWPLYPGASEYDQIRYISQTQGLPAEYLLSAGTKTSRFFNRDPNLGYPLWRLKTPEEHELETGIKSKEARKYIFNCLDDMAQVNMSTDLEGTDMLAEKADRREYIDLLKKMLTIDADKRITPLKTLNHPFVTMTHLLDFPHSNHVKSCFQNMEICKRRVNMYDTVNQIKSPFTTHVAPNTSTNLTMSFNNQLNTVHNQASVLASNSTAAATLSLANSDVSLLNYQSALYPSSAAPVAGVAQQSVSLQPGTTQICTQTDPFQQTFIVCPPAFQTGLQATTKHSGFPVRMENAVPIVPQAPAAQPLQIQSGVLTQGSCTPLMVATLHPQVATITPQYAVPFTLNCAAGRPALVEQTAAVLQAWPGGTQQILLPSTWQQLPGVALHNSVQPAAVIPETIGGGQQLADWRNAHSHGNQYSTLMQQPSLLTNHVTLATAQPLNVGVAHVVRQQQNSNVPAKKNKQPAPSAAKPSTTLETVPTQVYSLIGSSPLRSTSSSSNVLVPVQEQHQPIVIPDTPSPPVSVITIRSDTDEEEDSKYKPASLGMKQRSNVISYVTVNDSPDSDSSLNSPYATDPLSSLRSTGGALELPSRGASDSSNSRTIIVPPLKTQLNDCIVATQSSGILSGTSKTKPVASVSGQSSGCCITPTGYRSHRVVTNGVQPLNLSQNQQTTVLASQERSGNAGPRRQQAYVAPLTSTISQAPYTFQHSSPVHPHLAAATANAHLSSQPHMYTYAPTTAAPLGSTTSIAHLFSPQGSSRHTQYAAHPSTLVHQVPVSVGPSLLTSANVPPAQYQHQFAPQSYIGASRGSAIYTGYPLSPTKINQYSYL
SIO_010081: HIPK1
subclass of: SO_0000673
so part of: HIPK1
location: complement(join(406183..406668,407652..407788,408174..408412,408676..408891,409438..409620,409808..409950,412507..412641,414156..414277,415159..415381,415708..415870,416105..416289,417151..417237,419176..419295,420905..421028,427225..428300))
location: region:406183-428300:-1
so has part: feature:427225-428300:-1:exon
so has part: feature:420905-421028:-1:exon
so has part: feature:419176-419295:-1:exon
so has part: feature:417151-417237:-1:exon
so has part: feature:416105-416289:-1:exon
so has part: feature:415708-415870:-1:exon
so has part: feature:415159-415381:-1:exon
so has part: feature:414156-414277:-1:exon
so has part: feature:412507-412641:-1:exon
so has part: feature:409808-409950:-1:exon
so has part: feature:409438-409620:-1:exon
so has part: feature:408676-408891:-1:exon
so has part: feature:408174-408412:-1:exon
so has part: feature:407652-407788:-1:exon
so has part: feature:406183-406668:-1:exon

XP_035417205.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:427225-428300:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:420905-421028:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:419176-419295:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:417151-417237:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:416105-416289:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:415708-415870:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:415159-415381:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:414156-414277:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:412507-412641:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:409808-409950:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:409438-409620:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:408676-408891:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:408174-408412:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:407652-407788:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:406183-406668:-1:exon

DCLRE1B
type: Gene
subclass of: SO_0000704
RO_0002162: 8868
gene: DCLRE1B
note: DNA cross-link repair 1B; Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(434044..437142)
location: region:434044-437142:-1
so has part: feature:434044-437142:-1:exon
subclass of: SO_0000010

118255255
type: Gene
SIO_000068: ncbigene

position:434044:-1
position: 434044
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:437142:-1
position: 437142
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:434044-437142:-1:exon

DCLRE1B
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8868
gene: DCLRE1B
product: DNA cross-link repair 1B
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 23 long SRA reads, 2 Proteins
transcript id: XM_035561318.2
SIO_010081: DCLRE1B
subclass of: SO_0000673
so part of: DCLRE1B
location: complement(join(434044..436351,436426..436815,436894..437142))
location: region:434044-437142:-1
so has part: feature:436894-437142:-1:exon
so has part: feature:436426-436815:-1:exon
so has part: feature:434044-436351:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:436894-437142:-1:exon

position:436894:-1
position: 436894
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:436426-436815:-1:exon

position:436426:-1
position: 436426
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:436815:-1
position: 436815
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:434044-436351:-1:exon

position:436351:-1
position: 436351
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

DCLRE1B
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8868
gene: DCLRE1B
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: 5' exonuclease Apollo
translation: MQHEPALRGRRIDRLYLDNTHCRLRQPLPSRRCAMRQAARLIRAHPSHHVVVGVYSLGKEALLVDLAVEFGTWVVVSPSRLEQMRLLELPNVFTAEEGAGWIRAVDVAEIRWDTLVSWNTLHPTIAIVPTGRPVKVTHPNIYPIPYSDHSSFSELCEFVKWLRPCSIIPIIRDNMCQVYFQKYLSSDHQALPDLRIPKPVQESLQQQSKTKTQRTVCQQALFKRHSVSQGVVYESPEKYTEESDGPRGIKVPQQNFCESAFCSKEGCTGCHASKEKGKEELSGEQSGVAIAAGAVRQSPVSDEHVPSGFAESYLLIPLNILKQNSSQKFDKVVEDFIRRGEAS
SIO_010081: DCLRE1B
subclass of: SO_0000673
so part of: DCLRE1B
location: complement(join(435477..436351,436426..436582))
location: region:435477-436582:-1
so has part: feature:436426-436582:-1:exon
so has part: feature:435477-436351:-1:exon

XP_035417211.1
type: Protein
SIO_000068: ncbiprotein

position:435477:-1
position: 435477
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:436582:-1
position: 436582
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:436426-436582:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:435477-436351:-1:exon

AP4B1
type: Gene
subclass of: SO_0000704
RO_0002162: 8868
gene: AP4B1
note: adaptor related protein complex 4 subunit beta 1; Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 437165..444934
location: region:437165-444934:1
so has part: feature:437165-444934:1:exon
subclass of: SO_0000010

118255254
type: Gene
SIO_000068: ncbigene

position:437165:1
position: 437165
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:444934:1
position: 444934
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:437165-444934:1:exon

AP4B1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8868
gene: AP4B1
product: adaptor related protein complex 4 subunit beta 1, transcript variant X1
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_035561315.2
SIO_010081: AP4B1
subclass of: SO_0000673
so part of: AP4B1
location: join(437165..437365,437449..437673,437792..437922,438189..438336,438960..439456,440190..440273,441244..441347,441565..441772,442067..442351,442619..444934)
location: region:437165-444934:1
so has part: feature:437165-437365:1:exon
so has part: feature:437449-437673:1:exon
so has part: feature:437792-437922:1:exon
so has part: feature:438189-438336:1:exon
so has part: feature:438960-439456:1:exon
so has part: feature:440190-440273:1:exon
so has part: feature:441244-441347:1:exon
so has part: feature:441565-441772:1:exon
so has part: feature:442067-442351:1:exon
so has part: feature:442619-444934:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:437165-437365:1:exon

position:437365:1
position: 437365
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:437449-437673:1:exon

position:437449:1
position: 437449
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:437673:1
position: 437673
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:437792-437922:1:exon

position:437792:1
position: 437792
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:437922:1
position: 437922
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:438189-438336:1:exon

position:438189:1
position: 438189
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:438336:1
position: 438336
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:438960-439456:1:exon

position:438960:1
position: 438960
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:439456:1
position: 439456
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:440190-440273:1:exon

position:440190:1
position: 440190
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:440273:1
position: 440273
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:441244-441347:1:exon

position:441244:1
position: 441244
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:441347:1
position: 441347
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:441565-441772:1:exon

position:441565:1
position: 441565
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:441772:1
position: 441772
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:442067-442351:1:exon

position:442067:1
position: 442067
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:442351:1
position: 442351
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:442619-444934:1:exon

position:442619:1
position: 442619
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

AP4B1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8868
gene: AP4B1
product: adaptor related protein complex 4 subunit beta 1, transcript variant X2
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_035561317.2
SIO_010081: AP4B1
subclass of: SO_0000673
so part of: AP4B1
location: join(437180..437365,437449..437673,437792..437922,438189..438336,438960..439456,440190..440273,441244..441347,441565..441772,442619..444934)
location: region:437180-444934:1
so has part: feature:437180-437365:1:exon
so has part: feature:437449-437673:1:exon
so has part: feature:437792-437922:1:exon
so has part: feature:438189-438336:1:exon
so has part: feature:438960-439456:1:exon
so has part: feature:440190-440273:1:exon
so has part: feature:441244-441347:1:exon
so has part: feature:441565-441772:1:exon
so has part: feature:442619-444934:1:exon

position:437180:1
position: 437180
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:437180-437365:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:437449-437673:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:437792-437922:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:438189-438336:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:438960-439456:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:440190-440273:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:441244-441347:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:441565-441772:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:442619-444934:1:exon

AP4B1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8868
gene: AP4B1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: AP-4 complex subunit beta-1 isoform X1
translation: MPYLGGEEALRDLRRALGNPHVQADPLRYRAAVLRVIRLMTQGADVSGLFAEMVKAGAAADVVQKKLVHLYVRAHAPRLPRLALLAVNTLRRDCADPSPAVRGLALRSLCSLRVPGAQEYVRQPLLSGLRDPASYVRRAAVLGCAKVHELQGDSEVDGALVNELYSLLRDQDPIVVVNCLRALEEILKKEGGVVINKPIAHHLLNRMADLDQWGQSEVLAFLLRYRPRTEEELFDILNLLDGYLKSSSPSVVMAATKLFLVLAREYPHVQADVLVRVKGPLLSACTSESRELCFTALCHVRQILGSLPGHFSSHYKKFFCSYSEPHYIKCQKMEVLCELVNDENVLQVLEELKGYCTDISEELAQGAICAIGNIARTYTEQCVGILTELLGFQQEHITSAVVQAFRDLVWLCPQCTDAVCQALPSCEDIIQDSEGKQALIWLLGAHGDKVPSAPYVLEDFVENVKSEVFPAVKMELLTALVRLFLSRPAECQDMLGRLLYHCIEEEKDMAVRDRGLFYYRLLQSGVEEVKRVLCSPKSDPSLGLLEDQTEQPVNTWASEFNSLVPVYGRAHWALVTAQQPVESCYAFSPCTDSGNRGTESLISEGNKEVLKVHPDTGNLTLIPDVYLTAEQFEKTWLSLDISCQHSVPWGRTVHPDTIQTAFHVVHIHTIAMSKAGVQPWKAYFSAQDDTGCLFLTELLLETEDSEMQVSVKQSEAKPEALQAFMSVFRTAMGAVAGLRS
SIO_010081: AP4B1
subclass of: SO_0000673
so part of: AP4B1
location: join(437253..437365,437449..437673,437792..437922,438189..438336,438960..439456,440190..440273,441244..441347,441565..441772,442067..442351,442619..443046)
location: region:437253-443046:1
so has part: feature:437253-437365:1:exon
so has part: feature:437449-437673:1:exon
so has part: feature:437792-437922:1:exon
so has part: feature:438189-438336:1:exon
so has part: feature:438960-439456:1:exon
so has part: feature:440190-440273:1:exon
so has part: feature:441244-441347:1:exon
so has part: feature:441565-441772:1:exon
so has part: feature:442067-442351:1:exon
so has part: feature:442619-443046:1:exon

XP_035417208.1
type: Protein
SIO_000068: ncbiprotein

position:437253:1
position: 437253
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:443046:1
position: 443046
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:437253-437365:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:437449-437673:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:437792-437922:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:438189-438336:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:438960-439456:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:440190-440273:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:441244-441347:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:441565-441772:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:442067-442351:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:442619-443046:1:exon

AP4B1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8868
gene: AP4B1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: AP-4 complex subunit beta-1 isoform X2
translation: MPYLGGEEALRDLRRALGNPHVQADPLRYRAAVLRVIRLMTQGADVSGLFAEMVKAGAAADVVQKKLVHLYVRAHAPRLPRLALLAVNTLRRDCADPSPAVRGLALRSLCSLRVPGAQEYVRQPLLSGLRDPASYVRRAAVLGCAKVHELQGDSEVDGALVNELYSLLRDQDPIVVVNCLRALEEILKKEGGVVINKPIAHHLLNRMADLDQWGQSEVLAFLLRYRPRTEEELFDILNLLDGYLKSSSPSVVMAATKLFLVLAREYPHVQADVLVRVKGPLLSACTSESRELCFTALCHVRQILGSLPGHFSSHYKKFFCSYSEPHYIKCQKMEVLCELVNDENVLQVLEELKGYCTDISEELAQGAICAIGNIARTYTEQCVGILTELLGFQQEHITSAVVQAFRDLVWLCPQCTDAVCQALPSCEDIIQDSEGKQALIWLLGAHGDKVPSAPYVLEDFVENVKSEVFPAVKMELLTALVRLFLSRPAECQDMLGRLLYHCIESLISEGNKEVLKVHPDTGNLTLIPDVYLTAEQFEKTWLSLDISCQHSVPWGRTVHPDTIQTAFHVVHIHTIAMSKAGVQPWKAYFSAQDDTGCLFLTELLLETEDSEMQVSVKQSEAKPEALQAFMSVFRTAMGAVAGLRS
SIO_010081: AP4B1
subclass of: SO_0000673
so part of: AP4B1
location: join(437253..437365,437449..437673,437792..437922,438189..438336,438960..439456,440190..440273,441244..441347,441565..441772,442619..443046)
location: region:437253-443046:1
so has part: feature:437253-437365:1:exon
so has part: feature:437449-437673:1:exon
so has part: feature:437792-437922:1:exon
so has part: feature:438189-438336:1:exon
so has part: feature:438960-439456:1:exon
so has part: feature:440190-440273:1:exon
so has part: feature:441244-441347:1:exon
so has part: feature:441565-441772:1:exon
so has part: feature:442619-443046:1:exon

XP_035417210.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:437253-437365:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:437449-437673:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:437792-437922:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:438189-438336:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:438960-439456:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:440190-440273:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:441244-441347:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:441565-441772:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:442619-443046:1:exon

BCL2L15
type: Gene
subclass of: SO_0000704
RO_0002162: 8868
gene: BCL2L15
note: BCL2 like 15; Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 445676..449732
location: region:445676-449732:1
so has part: feature:445676-449732:1:exon
subclass of: SO_0000010

118255405
type: Gene
SIO_000068: ncbigene

position:445676:1
position: 445676
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:449732:1
position: 449732
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:445676-449732:1:exon

BCL2L15
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8868
gene: BCL2L15
product: BCL2 like 15
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins
transcript id: XM_035561574.2
SIO_010081: BCL2L15
subclass of: SO_0000673
so part of: BCL2L15
location: join(445676..445814,447880..448022,448848..449063,449589..449732)
location: region:445676-449732:1
so has part: feature:445676-445814:1:exon
so has part: feature:447880-448022:1:exon
so has part: feature:448848-449063:1:exon
so has part: feature:449589-449732:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:445676-445814:1:exon

position:445814:1
position: 445814
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:447880-448022:1:exon

position:447880:1
position: 447880
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:448022:1
position: 448022
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:448848-449063:1:exon

position:448848:1
position: 448848
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:449063:1
position: 449063
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:449589-449732:1:exon

position:449589:1
position: 449589
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

BCL2L15
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8868
gene: BCL2L15
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: bcl-2-like protein 15
translation: MTTFEEQTEHVVNALYYDLLCGDEIDNRCLQTDSGGPVLFAGEPPSDFDPVIIASRLRQIGDQCNMDFERVSSEVLAEVLTGKMEKFGAAVDSLSRSWSDQNPEMVYERAFLSVSVKLMMYILKKVPSVFHPSQLITVINGNAQVKNYIEASGGWENLDD
SIO_010081: BCL2L15
subclass of: SO_0000673
so part of: BCL2L15
location: join(445709..445814,447880..448022,448848..449063,449589..449606)
location: region:445709-449606:1
so has part: feature:445709-445814:1:exon
so has part: feature:447880-448022:1:exon
so has part: feature:448848-449063:1:exon
so has part: feature:449589-449606:1:exon

XP_035417467.1
type: Protein
SIO_000068: ncbiprotein

position:445709:1
position: 445709
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:449606:1
position: 449606
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:445709-445814:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:447880-448022:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:448848-449063:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:449589-449606:1:exon

PTPN22
type: Gene
subclass of: SO_0000704
RO_0002162: 8868
gene: PTPN22
note: protein tyrosine phosphatase non-receptor type 22; Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 452033..470093
location: region:452033-470093:1
so has part: feature:452033-470093:1:exon
subclass of: SO_0000010

118255408
type: Gene
SIO_000068: ncbigene

position:452033:1
position: 452033
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:470093:1
position: 470093
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:452033-470093:1:exon

PTPN22
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8868
gene: PTPN22
product: protein tyrosine phosphatase non-receptor type 22
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 8 Proteins
transcript id: XM_035561577.1
SIO_010081: PTPN22
subclass of: SO_0000673
so part of: PTPN22
location: join(452033..452119,455943..456051,456861..456937,457859..457954,458365..458403,458880..458951,459041..459100,459517..459659,460139..460205,461075..461152,461741..461833,463296..463372,464235..464959,465883..465966,466111..466241,466776..466803,467210..467290,467607..467710,468362..468392,469118..469195,470029..470093)
location: region:452033-470093:1
so has part: feature:452033-452119:1:exon
so has part: feature:455943-456051:1:exon
so has part: feature:456861-456937:1:exon
so has part: feature:457859-457954:1:exon
so has part: feature:458365-458403:1:exon
so has part: feature:458880-458951:1:exon
so has part: feature:459041-459100:1:exon
so has part: feature:459517-459659:1:exon
so has part: feature:460139-460205:1:exon
so has part: feature:461075-461152:1:exon
so has part: feature:461741-461833:1:exon
so has part: feature:463296-463372:1:exon
so has part: feature:464235-464959:1:exon
so has part: feature:465883-465966:1:exon
so has part: feature:466111-466241:1:exon
so has part: feature:466776-466803:1:exon
so has part: feature:467210-467290:1:exon
so has part: feature:467607-467710:1:exon
so has part: feature:468362-468392:1:exon
so has part: feature:469118-469195:1:exon
so has part: feature:470029-470093:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:452033-452119:1:exon

position:452119:1
position: 452119
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:455943-456051:1:exon

position:455943:1
position: 455943
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:456051:1
position: 456051
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:456861-456937:1:exon

position:456861:1
position: 456861
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:456937:1
position: 456937
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:457859-457954:1:exon

position:457859:1
position: 457859
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:457954:1
position: 457954
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:458365-458403:1:exon

position:458365:1
position: 458365
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:458403:1
position: 458403
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:458880-458951:1:exon

position:458880:1
position: 458880
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:458951:1
position: 458951
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:459041-459100:1:exon

position:459041:1
position: 459041
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:459100:1
position: 459100
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:459517-459659:1:exon

position:459517:1
position: 459517
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:459659:1
position: 459659
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:460139-460205:1:exon

position:460139:1
position: 460139
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:460205:1
position: 460205
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:461075-461152:1:exon

position:461075:1
position: 461075
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:461152:1
position: 461152
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:461741-461833:1:exon

position:461741:1
position: 461741
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:461833:1
position: 461833
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:463296-463372:1:exon

position:463296:1
position: 463296
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:463372:1
position: 463372
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:464235-464959:1:exon

position:464235:1
position: 464235
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:464959:1
position: 464959
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:465883-465966:1:exon

position:465883:1
position: 465883
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:465966:1
position: 465966
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:466111-466241:1:exon

position:466111:1
position: 466111
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:466241:1
position: 466241
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:466776-466803:1:exon

position:466776:1
position: 466776
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:466803:1
position: 466803
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:467210-467290:1:exon

position:467210:1
position: 467210
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:467290:1
position: 467290
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:467607-467710:1:exon

position:467607:1
position: 467607
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:467710:1
position: 467710
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:468362-468392:1:exon

position:468362:1
position: 468362
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:468392:1
position: 468392
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:469118-469195:1:exon

position:469118:1
position: 469118
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:469195:1
position: 469195
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:470029-470093:1:exon

position:470029:1
position: 470029
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

PTPN22
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8868
gene: PTPN22
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: tyrosine-protein phosphatase non-receptor type 22
translation: MDQREILLQNLERTQSKKLNQEAFVEEFLKLKRQSTKYRSDKIYPTAASEHPENIKKNRYKDILPFDHSRVELSLITSDADSHYINANFIKGVYGPRAYIATQGPLSTTVIDFWRMIWEYEVLIVIMACMEFEMGKKKCERYWADLGDSSLQCGPFSIACEAEEKKNEYVIRTLKVTLNEEIRTIHQFHYQNWPDHDVPSSIDPILELICEVRCYQPDDSIPICIHCSAGCGRTGVICAIDYTQKLLKDGIVPVNFSIFSLIQEMRTQRPSIVQTKEQYKLVYDAVIELFKRQIKALDAQENSAASQIQTRHPVPKPLLTSVEDIYSLSLLTCSGQEDQNVHQHFSPVVRNEASLAFLSAKGEHGSSGGRVPSIRQAISFGTLNFSNSRNAAAAEMWGTREALQKHHSLEFSSRSSGQLLVDLEPQRAGGKGAHGKAPLTRTTSTPFVLEQQGETWACDGGDAKPIFSSQSPNACYSSFQEKQQDGFSPDELNHSSQVAEASPGHRNCGQCPYRYFCSAEDPYFSSLSPDDPLSLELAAGQDTQGPHCVVASSPPPRPASHHIHYPSAARTSSLNVLPQPDDDDPPPLPERTPESFIVASESGEFPLATSDFQLPSRNKNIGTSLEWSGESHSDVFNDTVRLRPCKSMKLQSSRSETNRDRSNSPPPLPERTPESFVLADTASMQPAPRNSTSSLDLRNNASEASSKEPVKCFRRSKSLKILKNVRKSICSPSSLTKPSESAPSNHLSSFLNFGFASRFSKPKGPRNPPPAWNI
SIO_010081: PTPN22
subclass of: SO_0000673
so part of: PTPN22
location: join(452033..452119,455943..456051,456861..456937,457859..457954,458365..458403,458880..458951,459041..459100,459517..459659,460139..460205,461075..461152,461741..461833,463296..463372,464235..464959,465883..465966,466111..466241,466776..466803,467210..467290,467607..467710,468362..468392,469118..469195,470029..470093)
location: region:452033-470093:1
so has part: feature:452033-452119:1:exon
so has part: feature:455943-456051:1:exon
so has part: feature:456861-456937:1:exon
so has part: feature:457859-457954:1:exon
so has part: feature:458365-458403:1:exon
so has part: feature:458880-458951:1:exon
so has part: feature:459041-459100:1:exon
so has part: feature:459517-459659:1:exon
so has part: feature:460139-460205:1:exon
so has part: feature:461075-461152:1:exon
so has part: feature:461741-461833:1:exon
so has part: feature:463296-463372:1:exon
so has part: feature:464235-464959:1:exon
so has part: feature:465883-465966:1:exon
so has part: feature:466111-466241:1:exon
so has part: feature:466776-466803:1:exon
so has part: feature:467210-467290:1:exon
so has part: feature:467607-467710:1:exon
so has part: feature:468362-468392:1:exon
so has part: feature:469118-469195:1:exon
so has part: feature:470029-470093:1:exon

XP_035417470.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:452033-452119:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:455943-456051:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:456861-456937:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:457859-457954:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:458365-458403:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:458880-458951:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:459041-459100:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:459517-459659:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:460139-460205:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:461075-461152:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:461741-461833:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:463296-463372:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:464235-464959:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:465883-465966:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:466111-466241:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:466776-466803:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:467210-467290:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:467607-467710:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:468362-468392:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:469118-469195:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:470029-470093:1:exon

RSBN1
type: Gene
subclass of: SO_0000704
RO_0002162: 8868
gene: RSBN1
note: round spermatid basic protein 1; Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 472315..491567
location: region:472315-491567:1
so has part: feature:472315-491567:1:exon
subclass of: SO_0000010

118255266
type: Gene
SIO_000068: ncbigene

position:472315:1
position: 472315
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:491567:1
position: 491567
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:472315-491567:1:exon

RSBN1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8868
gene: RSBN1
product: round spermatid basic protein 1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 17 long SRA reads, 5 Proteins
transcript id: XM_050715312.1
SIO_010081: RSBN1
subclass of: SO_0000673
so part of: RSBN1
location: join(472315..472775,476784..477454,482539..482676,483116..483258,484122..484289,485240..485348,486801..491567)
location: region:472315-491567:1
so has part: feature:472315-472775:1:exon
so has part: feature:476784-477454:1:exon
so has part: feature:482539-482676:1:exon
so has part: feature:483116-483258:1:exon
so has part: feature:484122-484289:1:exon
so has part: feature:485240-485348:1:exon
so has part: feature:486801-491567:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:472315-472775:1:exon

position:472775:1
position: 472775
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:476784-477454:1:exon

position:476784:1
position: 476784
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:477454:1
position: 477454
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:482539-482676:1:exon

position:482539:1
position: 482539
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:482676:1
position: 482676
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:483116-483258:1:exon

position:483116:1
position: 483116
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:483258:1
position: 483258
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:484122-484289:1:exon

position:484122:1
position: 484122
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:484289:1
position: 484289
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:485240-485348:1:exon

position:485240:1
position: 485240
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:485348:1
position: 485348
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:486801-491567:1:exon

position:486801:1
position: 486801
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

RSBN1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8868
gene: RSBN1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: lysine-specific demethylase 9
translation: MAAQVAAVRAVSRAAEEPPPLPSGDRPGRPRGAGRRRRGPPGEAAAGGKRARLSQQLLAGPGPAEPLPPAALPGLPAAAGLFAFSPLSLPPPAALEERRRHHHHRHRSAAPEPGRLAAGQPQKARRGSPADGAAGRPSKRETQDENGKTQRADSLIMKKIKKKKKKKHREDMRGKRLKMYNKEVQTVCAGLTRIDKETLSQGHCDNLEINKESFRYLKDEQLCRLNLGMQEYRVPQGVQTPFVTHQEHSVRSSFLKTGTKFSNFIHEEHQSNGGALVLHAYMDELSFLSPVEMERFAEEFLALSFSENDKNAAYYALAIVHGAAAYLPDFLDYFAFNFPNTPVKMEILGKKDIETTTISNFHSQVNRTYCCGTYRAGPMRQISLVGAVDEEVGDYFPEFLDMLEESPFLRMTLPWGTLSSLRLQCRSQSDDGPIMWVRPGEQMIPTADMPKSPFKRRRSMNEIKNLQYLPRTSEPREVLFEDRTRAHADHVGQGFDWQSTAAVGVLKAVQFGEWSDQPRITKDVVCFHAEDFTDVVQRLQLDLHEPPVSQCVQWVDEAKLNQMRREGIRYARIQLCDNDIYFIPRNVIHQFKTVSAVCSLAWHIRLKQYHPVGETSQSTESDSNLNSSVPGKTESEGESQCVSVKIESEEPGTEMQLTTGVLSSSVSSISGLVQPDQVAQPLPGFKVESNQQHNPQDHTGSSV
SIO_010081: RSBN1
subclass of: SO_0000673
so part of: RSBN1
location: join(472355..472775,476784..477454,482539..482676,483116..483258,484122..484289,485240..485348,486801..487262)
location: region:472355-487262:1
so has part: feature:472355-472775:1:exon
so has part: feature:476784-477454:1:exon
so has part: feature:482539-482676:1:exon
so has part: feature:483116-483258:1:exon
so has part: feature:484122-484289:1:exon
so has part: feature:485240-485348:1:exon
so has part: feature:486801-487262:1:exon

XP_050571269.1
type: Protein
SIO_000068: ncbiprotein

position:472355:1
position: 472355
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:487262:1
position: 487262
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:472355-472775:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:476784-477454:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:482539-482676:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:483116-483258:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:484122-484289:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:485240-485348:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:486801-487262:1:exon

PHTF1
type: Gene
subclass of: SO_0000704
RO_0002162: 8868
gene: PHTF1
note: putative homeodomain transcription factor 1; Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 491671..504107
location: region:491671-504107:1
so has part: feature:491671-504107:1:exon
subclass of: SO_0000010

118255410
type: Gene
SIO_000068: ncbigene

position:491671:1
position: 491671
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:504107:1
position: 504107
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:491671-504107:1:exon

PHTF1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8868
gene: PHTF1
product: putative homeodomain transcription factor 1, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 33 long SRA reads, 23 Proteins
transcript id: XM_035561582.2
SIO_010081: PHTF1
subclass of: SO_0000673
so part of: PHTF1
location: join(491671..491803,491868..491924,492005..492074,492516..492674,493882..494041,494858..494983,495769..495928,496724..496894,496975..497052,497829..498038,498449..498577,498951..499223,499822..499953,500086..500172,500782..500937,501350..501445,502087..502212,502656..504107)
location: region:491671-504107:1
so has part: feature:491671-491803:1:exon
so has part: feature:491868-491924:1:exon
so has part: feature:492005-492074:1:exon
so has part: feature:492516-492674:1:exon
so has part: feature:493882-494041:1:exon
so has part: feature:494858-494983:1:exon
so has part: feature:495769-495928:1:exon
so has part: feature:496724-496894:1:exon
so has part: feature:496975-497052:1:exon
so has part: feature:497829-498038:1:exon
so has part: feature:498449-498577:1:exon
so has part: feature:498951-499223:1:exon
so has part: feature:499822-499953:1:exon
so has part: feature:500086-500172:1:exon
so has part: feature:500782-500937:1:exon
so has part: feature:501350-501445:1:exon
so has part: feature:502087-502212:1:exon
so has part: feature:502656-504107:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:491671-491803:1:exon

position:491803:1
position: 491803
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:491868-491924:1:exon

position:491868:1
position: 491868
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:491924:1
position: 491924
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:492005-492074:1:exon

position:492005:1
position: 492005
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:492074:1
position: 492074
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:492516-492674:1:exon

position:492516:1
position: 492516
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:492674:1
position: 492674
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:493882-494041:1:exon

position:493882:1
position: 493882
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:494041:1
position: 494041
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:494858-494983:1:exon

position:494858:1
position: 494858
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:494983:1
position: 494983
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:495769-495928:1:exon

position:495769:1
position: 495769
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:495928:1
position: 495928
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:496724-496894:1:exon

position:496724:1
position: 496724
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:496894:1
position: 496894
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:496975-497052:1:exon

position:496975:1
position: 496975
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:497052:1
position: 497052
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:497829-498038:1:exon

position:497829:1
position: 497829
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:498038:1
position: 498038
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:498449-498577:1:exon

position:498449:1
position: 498449
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:498577:1
position: 498577
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:498951-499223:1:exon

position:498951:1
position: 498951
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:499223:1
position: 499223
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:499822-499953:1:exon

position:499822:1
position: 499822
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:499953:1
position: 499953
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:500086-500172:1:exon

position:500086:1
position: 500086
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:500172:1
position: 500172
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:500782-500937:1:exon

position:500782:1
position: 500782
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:500937:1
position: 500937
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:501350-501445:1:exon

position:501350:1
position: 501350
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:501445:1
position: 501445
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:502087-502212:1:exon

position:502087:1
position: 502087
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:502212:1
position: 502212
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:502656-504107:1:exon

position:502656:1
position: 502656
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

PHTF1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8868
gene: PHTF1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protein PHTF1 isoform X1
translation: MAARDRDAISWYQKKVGAYDQQIWEKAIEQTEMKGFKNKPKKKGHIQPDLIDVDLIRGSTFAKAKPEIPWTSLTRKGIVRVVFFPLFSQWWIQVTSQRIFMWLLVLYLMQVIAVVLYFMIPVVNASEVMGPMCLMLLMGTVHCQIVSTQISKTSGNNGLSRRRRKLRKSVGVDGNSGSSPEKASKEQQSESASILNSLFGMLFRRRVRRVKMVAEKGTETENGVNAVNNGIKHRHARSEYRLLHLKEKNKLSDAEKSHQDDCTNRDGISDDLSSEEDAEAMAQRILLCQNAEGASSDNSYEEKKRPLVSLNQAVSQVKEALKGARDSDSVVESELESTIYSQDSRSCISVGSRSCSVTRRDSESTRHDSETEDMLWDDLLHGPECRSSCTSDSEEVTVKGTRRDLKEDVFQQNHLFWLQNTSPASAKVSALIWEGNDCKKVDMSVLEISGIIMSRVNAYQQGVGYQMLGNIITIGLAFLPFLYRLFRTDNLEQLCSISLKELLHIFCGAPASIPVIVLSAINFLERLCLTWMFFFMMCVAERTYKQRFLFAKLFSHITSARKARKYEIPHFRLKKVENIKIWLSLRSYLKRRGPQRSVDVVVSSIFLLALSIAFICCAQVLKGHKTFLNAAYNWEFLIWEAALLLFLLRLASLGSETNKKYSNISILLTEQINLYLKMEKKPNKKEQLSLVNNVLKLSTKLLKELDTPFRLYGLTMNPLIYNITRVVILSAVSGVISDLLGFNIRLWKIKP
SIO_010081: PHTF1
subclass of: SO_0000673
so part of: PHTF1
location: join(491759..491803,491868..491924,492005..492074,492516..492674,493882..494041,494858..494983,495769..495928,496724..496894,496975..497052,497829..498038,498449..498577,498951..499223,499822..499953,500086..500172,500782..500937,501350..501445,502087..502212,502656..502676)
location: region:491759-502676:1
so has part: feature:491759-491803:1:exon
so has part: feature:491868-491924:1:exon
so has part: feature:492005-492074:1:exon
so has part: feature:492516-492674:1:exon
so has part: feature:493882-494041:1:exon
so has part: feature:494858-494983:1:exon
so has part: feature:495769-495928:1:exon
so has part: feature:496724-496894:1:exon
so has part: feature:496975-497052:1:exon
so has part: feature:497829-498038:1:exon
so has part: feature:498449-498577:1:exon
so has part: feature:498951-499223:1:exon
so has part: feature:499822-499953:1:exon
so has part: feature:500086-500172:1:exon
so has part: feature:500782-500937:1:exon
so has part: feature:501350-501445:1:exon
so has part: feature:502087-502212:1:exon
so has part: feature:502656-502676:1:exon

XP_035417475.1
type: Protein
SIO_000068: ncbiprotein

position:491759:1
position: 491759
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:502676:1
position: 502676
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:491759-491803:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:491868-491924:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:492005-492074:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:492516-492674:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:493882-494041:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:494858-494983:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:495769-495928:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:496724-496894:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:496975-497052:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:497829-498038:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:498449-498577:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:498951-499223:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:499822-499953:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:500086-500172:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:500782-500937:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:501350-501445:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:502087-502212:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:502656-502676:1:exon

PHTF1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8868
gene: PHTF1
product: putative homeodomain transcription factor 1, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 long SRA reads, 2 Proteins
transcript id: XM_035561583.2
SIO_010081: PHTF1
subclass of: SO_0000673
so part of: PHTF1
location: join(493902..494050,494858..494983,495769..495928,496724..496894,496975..497052,497829..498038,498449..498577,498951..499223,499822..499953,500086..500172,500782..500937,501350..501445,502087..502212,502656..504018)
location: region:493902-504018:1
so has part: feature:493902-494050:1:exon
so has part: feature:494858-494983:1:exon
so has part: feature:495769-495928:1:exon
so has part: feature:496724-496894:1:exon
so has part: feature:496975-497052:1:exon
so has part: feature:497829-498038:1:exon
so has part: feature:498449-498577:1:exon
so has part: feature:498951-499223:1:exon
so has part: feature:499822-499953:1:exon
so has part: feature:500086-500172:1:exon
so has part: feature:500782-500937:1:exon
so has part: feature:501350-501445:1:exon
so has part: feature:502087-502212:1:exon
so has part: feature:502656-504018:1:exon

position:493902:1
position: 493902
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:504018:1
position: 504018
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:493902-494050:1:exon

position:494050:1
position: 494050
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:494858-494983:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:495769-495928:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:496724-496894:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:496975-497052:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:497829-498038:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:498449-498577:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:498951-499223:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:499822-499953:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:500086-500172:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:500782-500937:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:501350-501445:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:502087-502212:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:502656-504018:1:exon

PHTF1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8868
gene: PHTF1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protein PHTF1 isoform X2
translation: MLFRRRVRRVKMVAEKGTETENGVNAVNNGIKHRHARSEYRLLHLKEKNKLSDAEKSHQDDCTNRDGISDDLSSEEDAEAMAQRILLCQNAEGASSDNSYEEKKRPLVSLNQAVSQVKEALKGARDSDSVVESELESTIYSQDSRSCISVGSRSCSVTRRDSESTRHDSETEDMLWDDLLHGPECRSSCTSDSEEVTVKGTRRDLKEDVFQQNHLFWLQNTSPASAKVSALIWEGNDCKKVDMSVLEISGIIMSRVNAYQQGVGYQMLGNIITIGLAFLPFLYRLFRTDNLEQLCSISLKELLHIFCGAPASIPVIVLSAINFLERLCLTWMFFFMMCVAERTYKQRFLFAKLFSHITSARKARKYEIPHFRLKKVENIKIWLSLRSYLKRRGPQRSVDVVVSSIFLLALSIAFICCAQVLKGHKTFLNAAYNWEFLIWEAALLLFLLRLASLGSETNKKYSNISILLTEQINLYLKMEKKPNKKEQLSLVNNVLKLSTKLLKELDTPFRLYGLTMNPLIYNITRVVILSAVSGVISDLLGFNIRLWKIKP
SIO_010081: PHTF1
subclass of: SO_0000673
so part of: PHTF1
location: join(494967..494983,495769..495928,496724..496894,496975..497052,497829..498038,498449..498577,498951..499223,499822..499953,500086..500172,500782..500937,501350..501445,502087..502212,502656..502676)
location: region:494967-502676:1
so has part: feature:494967-494983:1:exon
so has part: feature:495769-495928:1:exon
so has part: feature:496724-496894:1:exon
so has part: feature:496975-497052:1:exon
so has part: feature:497829-498038:1:exon
so has part: feature:498449-498577:1:exon
so has part: feature:498951-499223:1:exon
so has part: feature:499822-499953:1:exon
so has part: feature:500086-500172:1:exon
so has part: feature:500782-500937:1:exon
so has part: feature:501350-501445:1:exon
so has part: feature:502087-502212:1:exon
so has part: feature:502656-502676:1:exon

XP_035417476.1
type: Protein
SIO_000068: ncbiprotein

position:494967:1
position: 494967
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:494967-494983:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:495769-495928:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:496724-496894:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:496975-497052:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:497829-498038:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:498449-498577:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:498951-499223:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:499822-499953:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:500086-500172:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:500782-500937:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:501350-501445:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:502087-502212:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:502656-502676:1:exon

MAGI3
type: Gene
subclass of: SO_0000704
RO_0002162: 8868
gene: MAGI3
note: membrane associated guanylate kinase, WW and PDZ domain containing 3; Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(504214..578211)
location: region:504214-578211:-1
so has part: feature:504214-578211:-1:exon
subclass of: SO_0000010

118255409
type: Gene
SIO_000068: ncbigene

position:504214:-1
position: 504214
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:578211:-1
position: 578211
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:504214-578211:-1:exon

MAGI3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8868
gene: MAGI3
product: membrane associated guanylate kinase, WW and PDZ domain containing 3, transcript variant X2
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_050715310.1
SIO_010081: MAGI3
subclass of: SO_0000673
so part of: MAGI3
location: complement(join(504214..507371,508818..508956,511739..511882,512369..512501,512613..512715,516321..516506,518310..518495,519702..519894,522376..522467,523640..523793,525849..525880,526894..527502,528931..529119,529913..530007,530943..531000,533112..533191,534038..534212,535483..535692,537806..537925,539803..539919,578110..578211))
location: region:504214-578211:-1
so has part: feature:578110-578211:-1:exon
so has part: feature:539803-539919:-1:exon
so has part: feature:537806-537925:-1:exon
so has part: feature:535483-535692:-1:exon
so has part: feature:534038-534212:-1:exon
so has part: feature:533112-533191:-1:exon
so has part: feature:530943-531000:-1:exon
so has part: feature:529913-530007:-1:exon
so has part: feature:528931-529119:-1:exon
so has part: feature:526894-527502:-1:exon
so has part: feature:525849-525880:-1:exon
so has part: feature:523640-523793:-1:exon
so has part: feature:522376-522467:-1:exon
so has part: feature:519702-519894:-1:exon
so has part: feature:518310-518495:-1:exon
so has part: feature:516321-516506:-1:exon
so has part: feature:512613-512715:-1:exon
so has part: feature:512369-512501:-1:exon
so has part: feature:511739-511882:-1:exon
so has part: feature:508818-508956:-1:exon
so has part: feature:504214-507371:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:578110-578211:-1:exon

position:578110:-1
position: 578110
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:539803-539919:-1:exon

position:539803:-1
position: 539803
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:539919:-1
position: 539919
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:537806-537925:-1:exon

position:537806:-1
position: 537806
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:537925:-1
position: 537925
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:535483-535692:-1:exon

position:535483:-1
position: 535483
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:535692:-1
position: 535692
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:534038-534212:-1:exon

position:534038:-1
position: 534038
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:534212:-1
position: 534212
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:533112-533191:-1:exon

position:533112:-1
position: 533112
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:533191:-1
position: 533191
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:530943-531000:-1:exon

position:530943:-1
position: 530943
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:531000:-1
position: 531000
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:529913-530007:-1:exon

position:529913:-1
position: 529913
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:530007:-1
position: 530007
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:528931-529119:-1:exon

position:528931:-1
position: 528931
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:529119:-1
position: 529119
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:526894-527502:-1:exon

position:526894:-1
position: 526894
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:527502:-1
position: 527502
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:525849-525880:-1:exon

position:525849:-1
position: 525849
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:525880:-1
position: 525880
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:523640-523793:-1:exon

position:523640:-1
position: 523640
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:523793:-1
position: 523793
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:522376-522467:-1:exon

position:522376:-1
position: 522376
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:522467:-1
position: 522467
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:519702-519894:-1:exon

position:519702:-1
position: 519702
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:519894:-1
position: 519894
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:518310-518495:-1:exon

position:518310:-1
position: 518310
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:518495:-1
position: 518495
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:516321-516506:-1:exon

position:516321:-1
position: 516321
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:516506:-1
position: 516506
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:512613-512715:-1:exon

position:512613:-1
position: 512613
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:512715:-1
position: 512715
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:512369-512501:-1:exon

position:512369:-1
position: 512369
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:512501:-1
position: 512501
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:511739-511882:-1:exon

position:511739:-1
position: 511739
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:511882:-1
position: 511882
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:508818-508956:-1:exon

position:508818:-1
position: 508818
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:508956:-1
position: 508956
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:504214-507371:-1:exon

position:507371:-1
position: 507371
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

MAGI3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8868
gene: MAGI3
product: membrane associated guanylate kinase, WW and PDZ domain containing 3, transcript variant X1
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_035561578.2
SIO_010081: MAGI3
subclass of: SO_0000673
so part of: MAGI3
location: complement(join(504214..507371,508818..508956,511739..511882,512369..512501,512613..512715,516321..516506,518310..518495,519702..519894,522376..522467,523640..523793,525849..525880,526894..527502,528931..529119,529913..530007,530943..531000,533112..533191,534038..534212,535483..535692,537806..537925,539803..539919,577830..578206))
location: region:504214-578206:-1
so has part: feature:577830-578206:-1:exon
so has part: feature:539803-539919:-1:exon
so has part: feature:537806-537925:-1:exon
so has part: feature:535483-535692:-1:exon
so has part: feature:534038-534212:-1:exon
so has part: feature:533112-533191:-1:exon
so has part: feature:530943-531000:-1:exon
so has part: feature:529913-530007:-1:exon
so has part: feature:528931-529119:-1:exon
so has part: feature:526894-527502:-1:exon
so has part: feature:525849-525880:-1:exon
so has part: feature:523640-523793:-1:exon
so has part: feature:522376-522467:-1:exon
so has part: feature:519702-519894:-1:exon
so has part: feature:518310-518495:-1:exon
so has part: feature:516321-516506:-1:exon
so has part: feature:512613-512715:-1:exon
so has part: feature:512369-512501:-1:exon
so has part: feature:511739-511882:-1:exon
so has part: feature:508818-508956:-1:exon
so has part: feature:504214-507371:-1:exon

position:578206:-1
position: 578206
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:577830-578206:-1:exon

position:577830:-1
position: 577830
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:539803-539919:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:537806-537925:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:535483-535692:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:534038-534212:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:533112-533191:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:530943-531000:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:529913-530007:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:528931-529119:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:526894-527502:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:525849-525880:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:523640-523793:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:522376-522467:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:519702-519894:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:518310-518495:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:516321-516506:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:512613-512715:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:512369-512501:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:511739-511882:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:508818-508956:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:504214-507371:-1:exon

MAGI3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8868
gene: MAGI3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: membrane-associated guanylate kinase, WW and PDZ domain-containing protein 3 isoform X1
translation: MSKTLRKKRHWLSKVQECVVSWGGAAGPDPELLRGGAERGEFPYLAGRLPPGGEGAPGPALLSGKAPAPGDVLLEVNGTPVSGLTHRDALAVIRHFREPVRLKTVRPGKVINKDLRHYLSLQFQKGSIDHKLQQVIRDNLYLRTIPCTTRAPRDGEVPGVDYNFIPVEQFKALEESGALLESGTYDGNFYGTPKPPAEPSPFQPDPVDQVLFDNDFDTESQRKRTTSVSKMQRMDSSLPEEEEEEEKEAVNGSGGIENKEKHSDSSDWMKPVPSYNQTSSSMDFRNYLSRDETLEPLPKNWEMAYTDTGMIYFIDHNTKTTTWLDPRLCKKAKAPEDCEDGELPYGWEKIEDPQYGTYYVDHINQKTQFENPVLEAKRKKQLGQTDVGPSKSGPEKSLFTRDPSQLTGALIRTSLKKSTMGFGFTIIGGDRPDEFLQVKNVLKDGPAAQDGRIAPGDVIVDINGNCVLGHTHADVVQMFQLVPVNQYVNMTLCRGYPLPDDNEDPVVDIVTATPIINGPPGTKGDVCLTSQDLIPGTVVLDQNGKTGPMLVNGRLNGPSVDTNEQRISVASSGGSQPELVTIPLVKGPKGFGFAIADSPTGQKVKMILDSQWCQGLQKGDVIKEICHQNVQSLTHLQVVEVLKQFPVGTEVPLLILRGGPPSPTKTGRVKDKQDSSGSLEAINDPIPQPMPFPPAAVRSGSPKLDPSEVYLKSKTIYEDKPPNTRDLDVFLRKQESGFGFRVLGGDGPDQPIYIGAIIPLGAAEKDGRLRAADELMCIDGVPVKGKSHKQVLDLMTSAARNGQVLLTVRRKIFFGGEKQPEEEESQPVVTQDGSPRLNRVEFANQQTPEVYDVHLQRKENEGFGFVILTSKNKPPPGVIPHKIGRVIDGSPADQCGKLKVGDRISAVNGQSIVELSHDSIVQLIKDAGHVVTLTVVAEEEHRGPPSGTNSAKQSPAPQHRPLGSAQMNPSSTDRVATEVEAGKEVSNSYRLSWPEHKHLTQPDAGIASVIGSRHSQVQNSGCFPVELERGPRGFGFSLRGGKEYNMGLFILRLAEDGPAVKDGRVHVGDQIVEINGEPTQGITHTRAIELIQAGGNKVLLLLRPGTGLIPDHSDWDSYNPSSSTVIYEEQSPLSSSSHSASPSEVCYLPVPGEALMKVQLSEKLEQVKNTVPEKISTLTENQFEMKPLSSPQRTKNRWDLSSSPGFEITKGSLELGTRRDRSESPKKLGAAEGHHHTGLHSPRKGDPEKSYGNLSHKPDSSRKSESKLTEIGMNNSSKKECSSGNQGRSASPQKHLSKQGNIEVFCKLQEYPDLTGGDKMTVEQLKGGNGKIGVTTKEGKQKSSGKKEGWSPERKYAAFEESNLPFSDSKRNTSEDEKIRKSNSGELSSSRFKTSSLSNIPLLSMEKQRRLDAQETDILNRRHGERHMELPDETKDDGISKSENSSPVKKTPITPGPWRVPSACKVTNTAGVAEKRV
SIO_010081: MAGI3
subclass of: SO_0000673
so part of: MAGI3
location: complement(join(506275..507371,508818..508956,511739..511882,512369..512501,512613..512715,516321..516506,518310..518495,519702..519894,522376..522467,523640..523793,525849..525880,526894..527502,528931..529119,529913..530007,530943..531000,533112..533191,534038..534212,535483..535692,537806..537925,539803..539919,577830..578151))
location: region:506275-578151:-1
so has part: feature:577830-578151:-1:exon
so has part: feature:539803-539919:-1:exon
so has part: feature:537806-537925:-1:exon
so has part: feature:535483-535692:-1:exon
so has part: feature:534038-534212:-1:exon
so has part: feature:533112-533191:-1:exon
so has part: feature:530943-531000:-1:exon
so has part: feature:529913-530007:-1:exon
so has part: feature:528931-529119:-1:exon
so has part: feature:526894-527502:-1:exon
so has part: feature:525849-525880:-1:exon
so has part: feature:523640-523793:-1:exon
so has part: feature:522376-522467:-1:exon
so has part: feature:519702-519894:-1:exon
so has part: feature:518310-518495:-1:exon
so has part: feature:516321-516506:-1:exon
so has part: feature:512613-512715:-1:exon
so has part: feature:512369-512501:-1:exon
so has part: feature:511739-511882:-1:exon
so has part: feature:508818-508956:-1:exon
so has part: feature:506275-507371:-1:exon

XP_035417471.1
type: Protein
SIO_000068: ncbiprotein

position:506275:-1
position: 506275
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:578151:-1
position: 578151
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:577830-578151:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:539803-539919:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:537806-537925:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:535483-535692:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:534038-534212:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:533112-533191:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:530943-531000:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:529913-530007:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:528931-529119:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:526894-527502:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:525849-525880:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:523640-523793:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:522376-522467:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:519702-519894:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:518310-518495:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:516321-516506:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:512613-512715:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:512369-512501:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:511739-511882:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:508818-508956:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:506275-507371:-1:exon

MAGI3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8868
gene: MAGI3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: membrane-associated guanylate kinase, WW and PDZ domain-containing protein 3 isoform X2
translation: MQRMDSSLPEEEEEEEKEAVNGSGGIENKEKHSDSSDWMKPVPSYNQTSSSMDFRNYLSRDETLEPLPKNWEMAYTDTGMIYFIDHNTKTTTWLDPRLCKKAKAPEDCEDGELPYGWEKIEDPQYGTYYVDHINQKTQFENPVLEAKRKKQLGQTDVGPSKSGPEKSLFTRDPSQLTGALIRTSLKKSTMGFGFTIIGGDRPDEFLQVKNVLKDGPAAQDGRIAPGDVIVDINGNCVLGHTHADVVQMFQLVPVNQYVNMTLCRGYPLPDDNEDPVVDIVTATPIINGPPGTKGDVCLTSQDLIPGTVVLDQNGKTGPMLVNGRLNGPSVDTNEQRISVASSGGSQPELVTIPLVKGPKGFGFAIADSPTGQKVKMILDSQWCQGLQKGDVIKEICHQNVQSLTHLQVVEVLKQFPVGTEVPLLILRGGPPSPTKTGRVKDKQDSSGSLEAINDPIPQPMPFPPAAVRSGSPKLDPSEVYLKSKTIYEDKPPNTRDLDVFLRKQESGFGFRVLGGDGPDQPIYIGAIIPLGAAEKDGRLRAADELMCIDGVPVKGKSHKQVLDLMTSAARNGQVLLTVRRKIFFGGEKQPEEEESQPVVTQDGSPRLNRVEFANQQTPEVYDVHLQRKENEGFGFVILTSKNKPPPGVIPHKIGRVIDGSPADQCGKLKVGDRISAVNGQSIVELSHDSIVQLIKDAGHVVTLTVVAEEEHRGPPSGTNSAKQSPAPQHRPLGSAQMNPSSTDRVATEVEAGKEVSNSYRLSWPEHKHLTQPDAGIASVIGSRHSQVQNSGCFPVELERGPRGFGFSLRGGKEYNMGLFILRLAEDGPAVKDGRVHVGDQIVEINGEPTQGITHTRAIELIQAGGNKVLLLLRPGTGLIPDHSDWDSYNPSSSTVIYEEQSPLSSSSHSASPSEVCYLPVPGEALMKVQLSEKLEQVKNTVPEKISTLTENQFEMKPLSSPQRTKNRWDLSSSPGFEITKGSLELGTRRDRSESPKKLGAAEGHHHTGLHSPRKGDPEKSYGNLSHKPDSSRKSESKLTEIGMNNSSKKECSSGNQGRSASPQKHLSKQGNIEVFCKLQEYPDLTGGDKMTVEQLKGGNGKIGVTTKEGKQKSSGKKEGWSPERKYAAFEESNLPFSDSKRNTSEDEKIRKSNSGELSSSRFKTSSLSNIPLLSMEKQRRLDAQETDILNRRHGERHMELPDETKDDGISKSENSSPVKKTPITPGPWRVPSACKVTNTAGVAEKRV
SIO_010081: MAGI3
subclass of: SO_0000673
so part of: MAGI3
location: complement(join(506275..507371,508818..508956,511739..511882,512369..512501,512613..512715,516321..516506,518310..518495,519702..519894,522376..522467,523640..523793,525849..525880,526894..527502,528931..529119,529913..530007,530943..531000,533112..533191,534038..534212,535483..535561))
location: region:506275-535561:-1
so has part: feature:535483-535561:-1:exon
so has part: feature:534038-534212:-1:exon
so has part: feature:533112-533191:-1:exon
so has part: feature:530943-531000:-1:exon
so has part: feature:529913-530007:-1:exon
so has part: feature:528931-529119:-1:exon
so has part: feature:526894-527502:-1:exon
so has part: feature:525849-525880:-1:exon
so has part: feature:523640-523793:-1:exon
so has part: feature:522376-522467:-1:exon
so has part: feature:519702-519894:-1:exon
so has part: feature:518310-518495:-1:exon
so has part: feature:516321-516506:-1:exon
so has part: feature:512613-512715:-1:exon
so has part: feature:512369-512501:-1:exon
so has part: feature:511739-511882:-1:exon
so has part: feature:508818-508956:-1:exon
so has part: feature:506275-507371:-1:exon

XP_050571267.1
type: Protein
SIO_000068: ncbiprotein

position:535561:-1
position: 535561
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:535483-535561:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:534038-534212:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:533112-533191:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:530943-531000:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:529913-530007:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:528931-529119:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:526894-527502:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:525849-525880:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:523640-523793:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:522376-522467:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:519702-519894:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:518310-518495:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:516321-516506:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:512613-512715:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:512369-512501:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:511739-511882:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:508818-508956:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:506275-507371:-1:exon

MAGI3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8868
gene: MAGI3
product: membrane associated guanylate kinase, WW and PDZ domain containing 3, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 long SRA reads, 5 Proteins
transcript id: XM_035561579.2
SIO_010081: MAGI3
subclass of: SO_0000673
so part of: MAGI3
location: complement(join(507320..507371,507815..507904,508818..508956,511739..511882,512369..512501,512613..512715,516321..516506,518310..518495,519702..519894,522376..522467,523640..523793,525849..525880,526894..527502,528931..529119,529913..530007,530943..531000,533112..533191,534038..534212,535483..535692,537806..537925,539803..539919,577830..578206))
location: region:507320-578206:-1
so has part: feature:577830-578206:-1:exon
so has part: feature:539803-539919:-1:exon
so has part: feature:537806-537925:-1:exon
so has part: feature:535483-535692:-1:exon
so has part: feature:534038-534212:-1:exon
so has part: feature:533112-533191:-1:exon
so has part: feature:530943-531000:-1:exon
so has part: feature:529913-530007:-1:exon
so has part: feature:528931-529119:-1:exon
so has part: feature:526894-527502:-1:exon
so has part: feature:525849-525880:-1:exon
so has part: feature:523640-523793:-1:exon
so has part: feature:522376-522467:-1:exon
so has part: feature:519702-519894:-1:exon
so has part: feature:518310-518495:-1:exon
so has part: feature:516321-516506:-1:exon
so has part: feature:512613-512715:-1:exon
so has part: feature:512369-512501:-1:exon
so has part: feature:511739-511882:-1:exon
so has part: feature:508818-508956:-1:exon
so has part: feature:507815-507904:-1:exon
so has part: feature:507320-507371:-1:exon

position:507320:-1
position: 507320
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:577830-578206:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:539803-539919:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:537806-537925:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:535483-535692:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:534038-534212:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:533112-533191:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:530943-531000:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:529913-530007:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:528931-529119:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:526894-527502:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:525849-525880:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:523640-523793:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:522376-522467:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:519702-519894:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:518310-518495:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:516321-516506:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:512613-512715:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:512369-512501:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:511739-511882:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:508818-508956:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:507815-507904:-1:exon

position:507815:-1
position: 507815
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:507904:-1
position: 507904
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 22
SIO_000628: feature:507320-507371:-1:exon

MAGI3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8868
gene: MAGI3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: membrane-associated guanylate kinase, WW and PDZ domain-containing protein 3 isoform X3
translation: MSKTLRKKRHWLSKVQECVVSWGGAAGPDPELLRGGAERGEFPYLAGRLPPGGEGAPGPALLSGKAPAPGDVLLEVNGTPVSGLTHRDALAVIRHFREPVRLKTVRPGKVINKDLRHYLSLQFQKGSIDHKLQQVIRDNLYLRTIPCTTRAPRDGEVPGVDYNFIPVEQFKALEESGALLESGTYDGNFYGTPKPPAEPSPFQPDPVDQVLFDNDFDTESQRKRTTSVSKMQRMDSSLPEEEEEEEKEAVNGSGGIENKEKHSDSSDWMKPVPSYNQTSSSMDFRNYLSRDETLEPLPKNWEMAYTDTGMIYFIDHNTKTTTWLDPRLCKKAKAPEDCEDGELPYGWEKIEDPQYGTYYVDHINQKTQFENPVLEAKRKKQLGQTDVGPSKSGPEKSLFTRDPSQLTGALIRTSLKKSTMGFGFTIIGGDRPDEFLQVKNVLKDGPAAQDGRIAPGDVIVDINGNCVLGHTHADVVQMFQLVPVNQYVNMTLCRGYPLPDDNEDPVVDIVTATPIINGPPGTKGDVCLTSQDLIPGTVVLDQNGKTGPMLVNGRLNGPSVDTNEQRISVASSGGSQPELVTIPLVKGPKGFGFAIADSPTGQKVKMILDSQWCQGLQKGDVIKEICHQNVQSLTHLQVVEVLKQFPVGTEVPLLILRGGPPSPTKTGRVKDKQDSSGSLEAINDPIPQPMPFPPAAVRSGSPKLDPSEVYLKSKTIYEDKPPNTRDLDVFLRKQESGFGFRVLGGDGPDQPIYIGAIIPLGAAEKDGRLRAADELMCIDGVPVKGKSHKQVLDLMTSAARNGQVLLTVRRKIFFGGEKQPEEEESQPVVTQDGSPRLNRVEFANQQTPEVYDVHLQRKENEGFGFVILTSKNKPPPGVIPHKIGRVIDGSPADQCGKLKVGDRISAVNGQSIVELSHDSIVQLIKDAGHVVTLTVVAEEEHRGPPSGTNSAKQSPAPQHRPLGSAQMNPSSTDRVATEVEAGKEVSNSYRLSWPEHKHLTQPDAGIASVIGSRHSQVQNSGCFPVELERGPRGFGFSLRGGKEYNMGLFILRLAEDGPAVKDGRVHVGDQIVEINGEPTQGITHTRAIELIQAGGNKVLLLLRPGTGLIPDHSLAPSSLCPYVKPEQH
SIO_010081: MAGI3
subclass of: SO_0000673
so part of: MAGI3
location: complement(join(507855..507904,508818..508956,511739..511882,512369..512501,512613..512715,516321..516506,518310..518495,519702..519894,522376..522467,523640..523793,525849..525880,526894..527502,528931..529119,529913..530007,530943..531000,533112..533191,534038..534212,535483..535692,537806..537925,539803..539919,577830..578151))
location: region:507855-578151:-1
so has part: feature:577830-578151:-1:exon
so has part: feature:539803-539919:-1:exon
so has part: feature:537806-537925:-1:exon
so has part: feature:535483-535692:-1:exon
so has part: feature:534038-534212:-1:exon
so has part: feature:533112-533191:-1:exon
so has part: feature:530943-531000:-1:exon
so has part: feature:529913-530007:-1:exon
so has part: feature:528931-529119:-1:exon
so has part: feature:526894-527502:-1:exon
so has part: feature:525849-525880:-1:exon
so has part: feature:523640-523793:-1:exon
so has part: feature:522376-522467:-1:exon
so has part: feature:519702-519894:-1:exon
so has part: feature:518310-518495:-1:exon
so has part: feature:516321-516506:-1:exon
so has part: feature:512613-512715:-1:exon
so has part: feature:512369-512501:-1:exon
so has part: feature:511739-511882:-1:exon
so has part: feature:508818-508956:-1:exon
so has part: feature:507855-507904:-1:exon

XP_035417472.1
type: Protein
SIO_000068: ncbiprotein

position:507855:-1
position: 507855
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:577830-578151:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:539803-539919:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:537806-537925:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:535483-535692:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:534038-534212:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:533112-533191:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:530943-531000:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:529913-530007:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:528931-529119:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:526894-527502:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:525849-525880:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:523640-523793:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:522376-522467:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:519702-519894:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:518310-518495:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:516321-516506:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:512613-512715:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:512369-512501:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:511739-511882:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:508818-508956:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:507855-507904:-1:exon

LOC118255412
type: Gene
subclass of: SO_0000704
RO_0002162: 8868
gene: LOC118255412
note: uncharacterized LOC118255412; Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(547682..550244)
location: region:547682-550244:-1
so has part: feature:547682-550244:-1:exon
subclass of: SO_0000011

118255412
type: Gene
SIO_000068: ncbigene

position:547682:-1
position: 547682
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:550244:-1
position: 550244
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:547682-550244:-1:exon

LOC118255412
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 8868
nc RNA class: lncRNA
gene: LOC118255412
product: uncharacterized LOC118255412
note: Derived by automated computational analysis using gene prediction method: Gnomon.
transcript id: XR_004780938.1
SIO_010081: LOC118255412
subclass of: SO_0000673
so part of: LOC118255412
location: complement(join(547682..547896,548647..548809,550117..550244))
location: region:547682-550244:-1
so has part: feature:550117-550244:-1:exon
so has part: feature:548647-548809:-1:exon
so has part: feature:547682-547896:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:550117-550244:-1:exon

position:550117:-1
position: 550117
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:548647-548809:-1:exon

position:548647:-1
position: 548647
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:548809:-1
position: 548809
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:547682-547896:-1:exon

position:547896:-1
position: 547896
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC118255414
type: Gene
subclass of: SO_0000704
RO_0002162: 8868
gene: LOC118255414
note: uncharacterized LOC118255414; Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(579846..605133)
location: region:579846-605133:-1
so has part: feature:579846-605133:-1:exon
subclass of: SO_0000011

118255414
type: Gene
SIO_000068: ncbigene

position:579846:-1
position: 579846
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:605133:-1
position: 605133
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:579846-605133:-1:exon

LOC118255414
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 8868
nc RNA class: lncRNA
gene: LOC118255414
product: uncharacterized LOC118255414
note: Derived by automated computational analysis using gene prediction method: Gnomon.
transcript id: XR_004780939.2
SIO_010081: LOC118255414
subclass of: SO_0000673
so part of: LOC118255414
location: complement(join(579846..580711,590650..590714,591974..592070,604949..605133))
location: region:579846-605133:-1
so has part: feature:604949-605133:-1:exon
so has part: feature:591974-592070:-1:exon
so has part: feature:590650-590714:-1:exon
so has part: feature:579846-580711:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:604949-605133:-1:exon

position:604949:-1
position: 604949
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:591974-592070:-1:exon

position:591974:-1
position: 591974
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:592070:-1
position: 592070
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:590650-590714:-1:exon

position:590650:-1
position: 590650
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:590714:-1
position: 590714
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:579846-580711:-1:exon

position:580711:-1
position: 580711
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LRIG2
type: Gene
subclass of: SO_0000704
RO_0002162: 8868
gene: LRIG2
note: leucine rich repeats and immunoglobulin like domains 2; Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(607071..630546)
location: region:607071-630546:-1
so has part: feature:607071-630546:-1:exon
subclass of: SO_0000010

118255415
type: Gene
SIO_000068: ncbigene

position:607071:-1
position: 607071
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:630546:-1
position: 630546
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:607071-630546:-1:exon

LRIG2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8868
gene: LRIG2
product: leucine rich repeats and immunoglobulin like domains 2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 20 long SRA reads, 15 Proteins
transcript id: XM_035561588.2
SIO_010081: LRIG2
subclass of: SO_0000673
so part of: LRIG2
location: complement(join(607071..610445,611079..611360,612703..612852,613340..613789,614596..614877,615807..616127,617177..617340,618778..618846,618982..619053,619870..619950,622837..622980,623224..623367,624055..624198,624322..624465,624992..625126,625614..625688,626167..626238,630459..630546))
location: region:607071-630546:-1
so has part: feature:630459-630546:-1:exon
so has part: feature:626167-626238:-1:exon
so has part: feature:625614-625688:-1:exon
so has part: feature:624992-625126:-1:exon
so has part: feature:624322-624465:-1:exon
so has part: feature:624055-624198:-1:exon
so has part: feature:623224-623367:-1:exon
so has part: feature:622837-622980:-1:exon
so has part: feature:619870-619950:-1:exon
so has part: feature:618982-619053:-1:exon
so has part: feature:618778-618846:-1:exon
so has part: feature:617177-617340:-1:exon
so has part: feature:615807-616127:-1:exon
so has part: feature:614596-614877:-1:exon
so has part: feature:613340-613789:-1:exon
so has part: feature:612703-612852:-1:exon
so has part: feature:611079-611360:-1:exon
so has part: feature:607071-610445:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:630459-630546:-1:exon

position:630459:-1
position: 630459
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:626167-626238:-1:exon

position:626167:-1
position: 626167
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:626238:-1
position: 626238
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:625614-625688:-1:exon

position:625614:-1
position: 625614
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:625688:-1
position: 625688
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:624992-625126:-1:exon

position:624992:-1
position: 624992
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:625126:-1
position: 625126
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:624322-624465:-1:exon

position:624322:-1
position: 624322
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:624465:-1
position: 624465
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:624055-624198:-1:exon

position:624055:-1
position: 624055
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:624198:-1
position: 624198
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:623224-623367:-1:exon

position:623224:-1
position: 623224
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:623367:-1
position: 623367
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:622837-622980:-1:exon

position:622837:-1
position: 622837
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:622980:-1
position: 622980
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:619870-619950:-1:exon

position:619870:-1
position: 619870
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:619950:-1
position: 619950
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:618982-619053:-1:exon

position:618982:-1
position: 618982
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:619053:-1
position: 619053
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:618778-618846:-1:exon

position:618778:-1
position: 618778
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:618846:-1
position: 618846
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:617177-617340:-1:exon

position:617177:-1
position: 617177
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:617340:-1
position: 617340
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:615807-616127:-1:exon

position:615807:-1
position: 615807
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:616127:-1
position: 616127
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:614596-614877:-1:exon

position:614596:-1
position: 614596
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:614877:-1
position: 614877
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:613340-613789:-1:exon

position:613340:-1
position: 613340
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:613789:-1
position: 613789
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:612703-612852:-1:exon

position:612703:-1
position: 612703
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:612852:-1
position: 612852
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:611079-611360:-1:exon

position:611079:-1
position: 611079
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:611360:-1
position: 611360
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:607071-610445:-1:exon

position:610445:-1
position: 610445
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LRIG2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8868
gene: LRIG2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: leucine-rich repeats and immunoglobulin-like domains protein 2
translation: MNYNELSEIPYFGETTSNISLLSLVHNTIPEINAEQLQVYLSLENLDLSSNLISEIKAASFPRMQLKYLNLSNNRITTLEAGCLDNLSSSLIVVKLNRNRISVIPPKIFKLPHVQFLELKRNRIKIVESLTFQGLESLKSLKMQRNGISRLMDGAFFGLNNIEELELEHNNLTEINKGWLYGLRTLQQLHVSQNAINRISPDAWEFCQRLSELDLSYNQLTRLKESAFVGLGLLEKLNLGDNRISHIADGVFRGLTNLQILDLRNNEISWAIEDANEAFAGLSRLDKLILQGNQIKSIMKKAFSGLERLEHLDLSNNAVMSIQENAFAQAQLKELLLNTSSLLCDCQLKWLPQWLTDSHLQQAVNVSCAHPEWLAGQSLLSVDPDDFVCDNFPKPQIRVHPETTIALRGMNVTLTCTAVSSSDSPMSTAWRKDSEVLYDAEVENFARYQQQSGEVVEYTTVLHLFNVNFTDEGRYQCIVTNHFGSNYSNKAKLTVNELPSFLKTPMDLTIRTGAMARLECAAEGHPTPQISWQKDGGTDFPAARERRMHVMPEDDVFFIANVKIEDMGIYSCMAQNTAGGLSANATLTVLETPSFIRPLEDRTVTRGETAVLQCIAGGSPAPRLNWTKDDGPLTVTERHFFAAANQLLIIVDAGLEDAGKYTCIMSNTLGTERGHIYLNVLASPNCDSSQSGIVHEEDGWATVGIVIIVVVCCVVGTSLVWVIVIYHMRRKNEDYSITNTEEMNLPADIPSYLSSQGTLSEPQEGYSNSEAGSHQQLMPPAGSYAHKGTDGGTAPLVICSDCYDNANIYSRTREYCPYAYITEEDPLDQTLPNLMVQMPKETYTARTQHEPSTLDNLLADRDMSVFLTNRDRISEKKISSQHINEPFQLPLWGVNKDLALSHSHFLHQQSARETPRPLRSEGIIDSDREQAASPRPCHRLREHNFDFSRTRNIHDYSETT
SIO_010081: LRIG2
subclass of: SO_0000673
so part of: LRIG2
location: complement(join(610216..610445,611079..611360,612703..612852,613340..613789,614596..614877,615807..616127,617177..617340,618778..618846,618982..619053,619870..619950,622837..622980,623224..623367,624055..624198,624322..624465,624992..625126,625614..625684))
location: region:610216-625684:-1
so has part: feature:625614-625684:-1:exon
so has part: feature:624992-625126:-1:exon
so has part: feature:624322-624465:-1:exon
so has part: feature:624055-624198:-1:exon
so has part: feature:623224-623367:-1:exon
so has part: feature:622837-622980:-1:exon
so has part: feature:619870-619950:-1:exon
so has part: feature:618982-619053:-1:exon
so has part: feature:618778-618846:-1:exon
so has part: feature:617177-617340:-1:exon
so has part: feature:615807-616127:-1:exon
so has part: feature:614596-614877:-1:exon
so has part: feature:613340-613789:-1:exon
so has part: feature:612703-612852:-1:exon
so has part: feature:611079-611360:-1:exon
so has part: feature:610216-610445:-1:exon

XP_035417481.1
type: Protein
SIO_000068: ncbiprotein

position:610216:-1
position: 610216
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:625684:-1
position: 625684
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:625614-625684:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:624992-625126:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:624322-624465:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:624055-624198:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:623224-623367:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:622837-622980:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:619870-619950:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:618982-619053:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:618778-618846:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:617177-617340:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:615807-616127:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:614596-614877:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:613340-613789:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:612703-612852:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:611079-611360:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:610216-610445:-1:exon

SLC16A1
type: Gene
subclass of: SO_0000704
RO_0002162: 8868
gene: SLC16A1
note: solute carrier family 16 member 1; Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 646788..662372
location: region:646788-662372:1
so has part: feature:646788-662372:1:exon
subclass of: SO_0000010

118255368
type: Gene
SIO_000068: ncbigene

position:646788:1
position: 646788
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:662372:1
position: 662372
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:646788-662372:1:exon

SLC16A1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8868
gene: SLC16A1
product: solute carrier family 16 member 1, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 197 long SRA reads, 9 Proteins
transcript id: XM_035561495.2
SIO_010081: SLC16A1
subclass of: SO_0000673
so part of: SLC16A1
location: join(646788..646917,655178..655435,657752..657895,658430..659290,659623..662365)
location: region:646788-662365:1
so has part: feature:646788-646917:1:exon
so has part: feature:655178-655435:1:exon
so has part: feature:657752-657895:1:exon
so has part: feature:658430-659290:1:exon
so has part: feature:659623-662365:1:exon

position:662365:1
position: 662365
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:646788-646917:1:exon

position:646917:1
position: 646917
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:655178-655435:1:exon

position:655178:1
position: 655178
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:655435:1
position: 655435
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:657752-657895:1:exon

position:657752:1
position: 657752
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:657895:1
position: 657895
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:658430-659290:1:exon

position:658430:1
position: 658430
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:659290:1
position: 659290
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:659623-662365:1:exon

position:659623:1
position: 659623
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

SLC16A1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8868
gene: SLC16A1
product: solute carrier family 16 member 1, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 42 long SRA reads, 9 Proteins
transcript id: XM_050715348.1
SIO_010081: SLC16A1
subclass of: SO_0000673
so part of: SLC16A1
location: join(647081..647161,655178..655435,657752..657895,658430..659290,659623..662365)
location: region:647081-662365:1
so has part: feature:647081-647161:1:exon
so has part: feature:655178-655435:1:exon
so has part: feature:657752-657895:1:exon
so has part: feature:658430-659290:1:exon
so has part: feature:659623-662365:1:exon

position:647081:1
position: 647081
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:647081-647161:1:exon

position:647161:1
position: 647161
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:655178-655435:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:657752-657895:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:658430-659290:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:659623-662365:1:exon

SLC16A1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8868
gene: SLC16A1
product: solute carrier family 16 member 1, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 96 long SRA reads, 9 Proteins
transcript id: XM_035561496.2
SIO_010081: SLC16A1
subclass of: SO_0000673
so part of: SLC16A1
location: join(647144..647523,655178..655435,657752..657895,658430..659290,659623..662372)
location: region:647144-662372:1
so has part: feature:647144-647523:1:exon
so has part: feature:655178-655435:1:exon
so has part: feature:657752-657895:1:exon
so has part: feature:658430-659290:1:exon
so has part: feature:659623-662372:1:exon

position:647144:1
position: 647144
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:647144-647523:1:exon

position:647523:1
position: 647523
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:655178-655435:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:657752-657895:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:658430-659290:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:659623-662372:1:exon

SLC16A1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8868
gene: SLC16A1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: monocarboxylate transporter 1
translation: MPPAVGGPVGYTPPEGGWGWAVVIGAFISIGFSYAFPKSITVFFKEIEVIFNASSSKVSWISSIMLAVMYAGGPISSILVNKYGSRPIMIVGGCLSGCGLVAASFCNTVEELYFCVGVVGGLGLAFNLNPALTMIGKYFFKKRPLANGLAMAGSPVFLSTLAPVNQMFFGIFGWRGSFLILGGLLLNCCVAGSLMRPIGPKPDQLKKEAAKEVLQEAGKAKKDDGDTSTDLIGGKAKKEKSTLFQTINKFLDLSLFTHRGFLLYLSGNVIMFFGLFTPLVFLSNYAKSKKIANESAAFLLSILAFVDMVARPSMGLVANTKWIRPRVQYFFAISVIYNGVCHLLAPMSTTYAGFCIYAGFFGFAFGWLSSVLFETLMDLVGAQRFSSAVGLVTIVECCPVLLGPPLLGKLNDMYGDYKYTYWACGVILIISGVYLFIGMGINYRLVAKEQKAEEKTRNEGKEEETNIDEAEKQKEANNDVATLPQKSTEDGVKEEESHM
SIO_010081: SLC16A1
subclass of: SO_0000673
so part of: SLC16A1
location: join(655219..655435,657752..657895,658430..659290,659623..659900)
location: region:655219-659900:1
so has part: feature:655219-655435:1:exon
so has part: feature:657752-657895:1:exon
so has part: feature:658430-659290:1:exon
so has part: feature:659623-659900:1:exon

XP_035417388.1
type: Protein
SIO_000068: ncbiprotein

position:655219:1
position: 655219
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:659900:1
position: 659900
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:655219-655435:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:657752-657895:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:658430-659290:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:659623-659900:1:exon

SLC16A1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8868
gene: SLC16A1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: monocarboxylate transporter 1
translation: MPPAVGGPVGYTPPEGGWGWAVVIGAFISIGFSYAFPKSITVFFKEIEVIFNASSSKVSWISSIMLAVMYAGGPISSILVNKYGSRPIMIVGGCLSGCGLVAASFCNTVEELYFCVGVVGGLGLAFNLNPALTMIGKYFFKKRPLANGLAMAGSPVFLSTLAPVNQMFFGIFGWRGSFLILGGLLLNCCVAGSLMRPIGPKPDQLKKEAAKEVLQEAGKAKKDDGDTSTDLIGGKAKKEKSTLFQTINKFLDLSLFTHRGFLLYLSGNVIMFFGLFTPLVFLSNYAKSKKIANESAAFLLSILAFVDMVARPSMGLVANTKWIRPRVQYFFAISVIYNGVCHLLAPMSTTYAGFCIYAGFFGFAFGWLSSVLFETLMDLVGAQRFSSAVGLVTIVECCPVLLGPPLLGKLNDMYGDYKYTYWACGVILIISGVYLFIGMGINYRLVAKEQKAEEKTRNEGKEEETNIDEAEKQKEANNDVATLPQKSTEDGVKEEESHM
SIO_010081: SLC16A1
subclass of: SO_0000673
so part of: SLC16A1
location: join(655219..655435,657752..657895,658430..659290,659623..659900)
location: region:655219-659900:1
so has part: feature:655219-655435:1:exon
so has part: feature:657752-657895:1:exon
so has part: feature:658430-659290:1:exon
so has part: feature:659623-659900:1:exon

XP_035417389.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:655219-655435:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:657752-657895:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:658430-659290:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:659623-659900:1:exon

SLC16A1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8868
gene: SLC16A1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: monocarboxylate transporter 1
translation: MPPAVGGPVGYTPPEGGWGWAVVIGAFISIGFSYAFPKSITVFFKEIEVIFNASSSKVSWISSIMLAVMYAGGPISSILVNKYGSRPIMIVGGCLSGCGLVAASFCNTVEELYFCVGVVGGLGLAFNLNPALTMIGKYFFKKRPLANGLAMAGSPVFLSTLAPVNQMFFGIFGWRGSFLILGGLLLNCCVAGSLMRPIGPKPDQLKKEAAKEVLQEAGKAKKDDGDTSTDLIGGKAKKEKSTLFQTINKFLDLSLFTHRGFLLYLSGNVIMFFGLFTPLVFLSNYAKSKKIANESAAFLLSILAFVDMVARPSMGLVANTKWIRPRVQYFFAISVIYNGVCHLLAPMSTTYAGFCIYAGFFGFAFGWLSSVLFETLMDLVGAQRFSSAVGLVTIVECCPVLLGPPLLGKLNDMYGDYKYTYWACGVILIISGVYLFIGMGINYRLVAKEQKAEEKTRNEGKEEETNIDEAEKQKEANNDVATLPQKSTEDGVKEEESHM
SIO_010081: SLC16A1
subclass of: SO_0000673
so part of: SLC16A1
location: join(655219..655435,657752..657895,658430..659290,659623..659900)
location: region:655219-659900:1
so has part: feature:655219-655435:1:exon
so has part: feature:657752-657895:1:exon
so has part: feature:658430-659290:1:exon
so has part: feature:659623-659900:1:exon

XP_050571305.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:655219-655435:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:657752-657895:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:658430-659290:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:659623-659900:1:exon

TAFA3
type: Gene
subclass of: SO_0000704
RO_0002162: 8868
gene: TAFA3
note: TAFA chemokine like family member 3; Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(735462..753103)
location: region:735462-753103:-1
so has part: feature:735462-753103:-1:exon
subclass of: SO_0000010

118255388
type: Gene
SIO_000068: ncbigene

position:735462:-1
position: 735462
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:753103:-1
position: 753103
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:735462-753103:-1:exon

TAFA3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8868
gene: TAFA3
product: TAFA chemokine like family member 3, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 8 Proteins
transcript id: XM_035561539.2
SIO_010081: TAFA3
subclass of: SO_0000673
so part of: TAFA3
location: complement(join(735462..736336,737534..737658,738664..738813,744994..745109,745292..745376,745513..745613,753050..753103))
location: region:735462-753103:-1
so has part: feature:753050-753103:-1:exon
so has part: feature:745513-745613:-1:exon
so has part: feature:745292-745376:-1:exon
so has part: feature:744994-745109:-1:exon
so has part: feature:738664-738813:-1:exon
so has part: feature:737534-737658:-1:exon
so has part: feature:735462-736336:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:753050-753103:-1:exon

position:753050:-1
position: 753050
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:745513-745613:-1:exon

position:745513:-1
position: 745513
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:745613:-1
position: 745613
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:745292-745376:-1:exon

position:745292:-1
position: 745292
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:745376:-1
position: 745376
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:744994-745109:-1:exon

position:744994:-1
position: 744994
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:745109:-1
position: 745109
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:738664-738813:-1:exon

position:738664:-1
position: 738664
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:738813:-1
position: 738813
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:737534-737658:-1:exon

position:737534:-1
position: 737534
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:737658:-1
position: 737658
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:735462-736336:-1:exon

position:736336:-1
position: 736336
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

TAFA3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8868
gene: TAFA3
product: TAFA chemokine like family member 3, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 8 Proteins
transcript id: XM_050715368.1
SIO_010081: TAFA3
subclass of: SO_0000673
so part of: TAFA3
location: complement(join(735462..736336,737534..737658,738664..738813,744994..745109,745292..745376,753050..753094))
location: region:735462-753094:-1
so has part: feature:753050-753094:-1:exon
so has part: feature:745292-745376:-1:exon
so has part: feature:744994-745109:-1:exon
so has part: feature:738664-738813:-1:exon
so has part: feature:737534-737658:-1:exon
so has part: feature:735462-736336:-1:exon

position:753094:-1
position: 753094
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:753050-753094:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:745292-745376:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:744994-745109:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:738664-738813:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:737534-737658:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:735462-736336:-1:exon

TAFA3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8868
gene: TAFA3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: chemokine-like protein TAFA-3
translation: MSERDIQSLSKWVLVLTLCLTMLWGRLTLASTHHRSHSVHVEPGTCEVIAAHRCCNKNKIEERSQTVKCSCFPGQVAGTTRAAPSCVDASIVLQKWWCQMEPCLDGEECKVLPDLSGWSCSSGNKVKTTKVTR
SIO_010081: TAFA3
subclass of: SO_0000673
so part of: TAFA3
location: complement(join(736325..736336,737534..737658,738664..738813,744994..745108))
location: region:736325-745108:-1
so has part: feature:744994-745108:-1:exon
so has part: feature:738664-738813:-1:exon
so has part: feature:737534-737658:-1:exon
so has part: feature:736325-736336:-1:exon

XP_035417432.1
type: Protein
SIO_000068: ncbiprotein

position:736325:-1
position: 736325
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:745108:-1
position: 745108
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:744994-745108:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:738664-738813:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:737534-737658:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:736325-736336:-1:exon

TAFA3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8868
gene: TAFA3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: chemokine-like protein TAFA-3
translation: MSERDIQSLSKWVLVLTLCLTMLWGRLTLASTHHRSHSVHVEPGTCEVIAAHRCCNKNKIEERSQTVKCSCFPGQVAGTTRAAPSCVDASIVLQKWWCQMEPCLDGEECKVLPDLSGWSCSSGNKVKTTKVTR
SIO_010081: TAFA3
subclass of: SO_0000673
so part of: TAFA3
location: complement(join(736325..736336,737534..737658,738664..738813,744994..745108))
location: region:736325-745108:-1
so has part: feature:744994-745108:-1:exon
so has part: feature:738664-738813:-1:exon
so has part: feature:737534-737658:-1:exon
so has part: feature:736325-736336:-1:exon

XP_050571325.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:744994-745108:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:738664-738813:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:737534-737658:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:736325-736336:-1:exon

PPM1J
type: Gene
subclass of: SO_0000704
RO_0002162: 8868
gene: PPM1J
note: protein phosphatase, Mg2+/Mn2+ dependent 1J; Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 759152..768389
location: region:759152-768389:1
so has part: feature:759152-768389:1:exon
subclass of: SO_0000010

118255324
type: Gene
SIO_000068: ncbigene

position:759152:1
position: 759152
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:768389:1
position: 768389
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:759152-768389:1:exon

PPM1J
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8868
gene: PPM1J
product: protein phosphatase, Mg2+/Mn2+ dependent 1J
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 long SRA reads, 7 Proteins
transcript id: XM_035561422.2
SIO_010081: PPM1J
subclass of: SO_0000673
so part of: PPM1J
location: join(759152..759417,760817..760943,761343..761666,762108..762220,763715..763799,765550..765668,765842..765905,766133..766240,766405..766556,766854..768389)
location: region:759152-768389:1
so has part: feature:759152-759417:1:exon
so has part: feature:760817-760943:1:exon
so has part: feature:761343-761666:1:exon
so has part: feature:762108-762220:1:exon
so has part: feature:763715-763799:1:exon
so has part: feature:765550-765668:1:exon
so has part: feature:765842-765905:1:exon
so has part: feature:766133-766240:1:exon
so has part: feature:766405-766556:1:exon
so has part: feature:766854-768389:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:759152-759417:1:exon

position:759417:1
position: 759417
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:760817-760943:1:exon

position:760817:1
position: 760817
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:760943:1
position: 760943
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:761343-761666:1:exon

position:761343:1
position: 761343
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:761666:1
position: 761666
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:762108-762220:1:exon

position:762108:1
position: 762108
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:762220:1
position: 762220
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:763715-763799:1:exon

position:763715:1
position: 763715
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:763799:1
position: 763799
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:765550-765668:1:exon

position:765550:1
position: 765550
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:765668:1
position: 765668
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:765842-765905:1:exon

position:765842:1
position: 765842
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:765905:1
position: 765905
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:766133-766240:1:exon

position:766133:1
position: 766133
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:766240:1
position: 766240
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:766405-766556:1:exon

position:766405:1
position: 766405
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:766556:1
position: 766556
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:766854-768389:1:exon

position:766854:1
position: 766854
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

PPM1J
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8868
gene: PPM1J
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protein phosphatase 1J
translation: MLLRVRSAVAHLVAGLGPGAGAQPPAEPRRGGAGGGGGGGGGAAALFCRPAFLQLTPEELRRADDHTGRAVQSPRDGRRRLPWSTGYAEVINAGKSQHNEDQACCEVVFVERRPSPRGHPPSGDGSRELDGGRKGFYFHYWALFDGHAGSGAAVMASRRLHLHICEQLRDLVDILQDPSPPPICLQHDARAGAAELSRTPIKEDNGEVPSDALPRFHLEKAVSHESLVIGAIENAFKHMDDQIEQERASQSISGGCCALAAVYLMGKFYVANAGDSRAIIIRNGEIIPMSREFTPETERQRLQFLAFLRPELLGKEFTHLEFPRRIQPKELGKKMLYRDQNMNGWAYKKIEEDDLKFPLIYGEGKKARVMATIGVTRGLGDHDLKVFSSNIHIKPFLSCFPEVRVYDLTQYEHCPDDVLVLGTDGLWDVTNDEEVASVVMEVLTSYEPNDLCRYTMVAQELVVRSRGVLKERGWRLPNDRLGSGDDISVFVIPLGGPGNYA
SIO_010081: PPM1J
subclass of: SO_0000673
so part of: PPM1J
location: join(759152..759417,760817..760943,761343..761666,762108..762220,763715..763799,765550..765668,765842..765905,766133..766240,766405..766556,766854..767001)
location: region:759152-767001:1
so has part: feature:759152-759417:1:exon
so has part: feature:760817-760943:1:exon
so has part: feature:761343-761666:1:exon
so has part: feature:762108-762220:1:exon
so has part: feature:763715-763799:1:exon
so has part: feature:765550-765668:1:exon
so has part: feature:765842-765905:1:exon
so has part: feature:766133-766240:1:exon
so has part: feature:766405-766556:1:exon
so has part: feature:766854-767001:1:exon

XP_035417315.1
type: Protein
SIO_000068: ncbiprotein

position:767001:1
position: 767001
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:759152-759417:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:760817-760943:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:761343-761666:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:762108-762220:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:763715-763799:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:765550-765668:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:765842-765905:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:766133-766240:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:766405-766556:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:766854-767001:1:exon

RHOC
type: Gene
subclass of: SO_0000704
RO_0002162: 8868
gene: RHOC
note: ras homolog family member C; Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 769540..778190
location: region:769540-778190:1
so has part: feature:769540-778190:1:exon
subclass of: SO_0000010

118255326
type: Gene
SIO_000068: ncbigene

position:769540:1
position: 769540
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:778190:1
position: 778190
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:769540-778190:1:exon

RHOC
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8868
gene: RHOC
product: ras homolog family member C
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_035561426.2
SIO_010081: RHOC
subclass of: SO_0000673
so part of: RHOC
location: join(769540..769649,776228..776385,776703..776823,777101..777231,777455..778190)
location: region:769540-778190:1
so has part: feature:769540-769649:1:exon
so has part: feature:776228-776385:1:exon
so has part: feature:776703-776823:1:exon
so has part: feature:777101-777231:1:exon
so has part: feature:777455-778190:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:769540-769649:1:exon

position:769649:1
position: 769649
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:776228-776385:1:exon

position:776228:1
position: 776228
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:776385:1
position: 776385
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:776703-776823:1:exon

position:776703:1
position: 776703
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:776823:1
position: 776823
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:777101-777231:1:exon

position:777101:1
position: 777101
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:777231:1
position: 777231
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:777455-778190:1:exon

position:777455:1
position: 777455
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

RHOC
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8868
gene: RHOC
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: rho-related GTP-binding protein RhoC
translation: MAAIRKKLVIVGDGACGKTCLLIVFSKDQFPEVYVPTVFENYIADIEVDGKQVELALWDTAGQEDYDRLRPLSYPDTDVILMCFSIDSPDSLENIPEKWTPEVKHFCPNVPIILVGNKKDLRNDEHTRRELAKMKQEPVKPEEGRDMANRINAFGYLECSAKTKEGVREVFEMATRAGLQVRKNKKRRGCPLL
SIO_010081: RHOC
subclass of: SO_0000673
so part of: RHOC
location: join(776230..776385,776703..776823,777101..777231,777455..777628)
location: region:776230-777628:1
so has part: feature:776230-776385:1:exon
so has part: feature:776703-776823:1:exon
so has part: feature:777101-777231:1:exon
so has part: feature:777455-777628:1:exon

XP_035417319.1
type: Protein
SIO_000068: ncbiprotein

position:776230:1
position: 776230
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:777628:1
position: 777628
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:776230-776385:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:776703-776823:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:777101-777231:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:777455-777628:1:exon

MOV10
type: Gene
subclass of: SO_0000704
RO_0002162: 8868
gene: MOV10
note: Mov10 RISC complex RNA helicase; Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(778574..784810)
location: region:778574-784810:-1
so has part: feature:778574-784810:-1:exon
subclass of: SO_0000010

118255325
type: Gene
SIO_000068: ncbigene

position:778574:-1
position: 778574
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:784810:-1
position: 784810
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:778574-784810:-1:exon

MOV10
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8868
gene: MOV10
product: Mov10 RISC complex RNA helicase
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 long SRA read, 1 Protein
transcript id: XM_035561425.2
SIO_010081: MOV10
subclass of: SO_0000673
so part of: MOV10
location: complement(join(778574..778711,778785..778906,778995..779083,779220..779345,779451..779525,779608..779799,779878..780001,780232..780334,780412..780531,780621..780718,780904..781007,781099..781260,781347..781494,781592..781768,781909..782063,782173..782326,782442..782564,782805..783045,783126..783364,783456..783586,783733..783829,784615..784810))
location: region:778574-784810:-1
so has part: feature:784615-784810:-1:exon
so has part: feature:783733-783829:-1:exon
so has part: feature:783456-783586:-1:exon
so has part: feature:783126-783364:-1:exon
so has part: feature:782805-783045:-1:exon
so has part: feature:782442-782564:-1:exon
so has part: feature:782173-782326:-1:exon
so has part: feature:781909-782063:-1:exon
so has part: feature:781592-781768:-1:exon
so has part: feature:781347-781494:-1:exon
so has part: feature:781099-781260:-1:exon
so has part: feature:780904-781007:-1:exon
so has part: feature:780621-780718:-1:exon
so has part: feature:780412-780531:-1:exon
so has part: feature:780232-780334:-1:exon
so has part: feature:779878-780001:-1:exon
so has part: feature:779608-779799:-1:exon
so has part: feature:779451-779525:-1:exon
so has part: feature:779220-779345:-1:exon
so has part: feature:778995-779083:-1:exon
so has part: feature:778785-778906:-1:exon
so has part: feature:778574-778711:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:784615-784810:-1:exon

position:784615:-1
position: 784615
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:783733-783829:-1:exon

position:783733:-1
position: 783733
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:783829:-1
position: 783829
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:783456-783586:-1:exon

position:783456:-1
position: 783456
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:783586:-1
position: 783586
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:783126-783364:-1:exon

position:783126:-1
position: 783126
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:783364:-1
position: 783364
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:782805-783045:-1:exon

position:782805:-1
position: 782805
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:783045:-1
position: 783045
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:782442-782564:-1:exon

position:782442:-1
position: 782442
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:782564:-1
position: 782564
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:782173-782326:-1:exon

position:782173:-1
position: 782173
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:782326:-1
position: 782326
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:781909-782063:-1:exon

position:781909:-1
position: 781909
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:782063:-1
position: 782063
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:781592-781768:-1:exon

position:781592:-1
position: 781592
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:781768:-1
position: 781768
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:781347-781494:-1:exon

position:781347:-1
position: 781347
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:781494:-1
position: 781494
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:781099-781260:-1:exon

position:781099:-1
position: 781099
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:781260:-1
position: 781260
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:780904-781007:-1:exon

position:780904:-1
position: 780904
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:781007:-1
position: 781007
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:780621-780718:-1:exon

position:780621:-1
position: 780621
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:780718:-1
position: 780718
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:780412-780531:-1:exon

position:780412:-1
position: 780412
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:780531:-1
position: 780531
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:780232-780334:-1:exon

position:780232:-1
position: 780232
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:780334:-1
position: 780334
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:779878-780001:-1:exon

position:779878:-1
position: 779878
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:780001:-1
position: 780001
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:779608-779799:-1:exon

position:779608:-1
position: 779608
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:779799:-1
position: 779799
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:779451-779525:-1:exon

position:779451:-1
position: 779451
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:779525:-1
position: 779525
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:779220-779345:-1:exon

position:779220:-1
position: 779220
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:779345:-1
position: 779345
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:778995-779083:-1:exon

position:778995:-1
position: 778995
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:779083:-1
position: 779083
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:778785-778906:-1:exon

position:778785:-1
position: 778785
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:778906:-1
position: 778906
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 22
SIO_000628: feature:778574-778711:-1:exon

position:778711:-1
position: 778711
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

MOV10
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8868
gene: MOV10
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: helicase MOV-10
translation: MPRFSVAEAKRCGEQFVQFLRDTGREQESRRDSLRTIYGGEFRARTDTKMPSFSCILYALRVTHQAQVHGESVHFKKGKKRVVVADQYRRPRTNVETSAPAASGQQPSSGPQVPLSRAKKWAEFIRGKHGVEIVSEHDRANGQIRFDVTLGQPRTVTVQVKNQGAEAVTLRRCQSLRRVREFSFLDEQGATQGQPLLLHPGGTYPIQVRCLTRYNGFFRAVVVFEFTKEPGESFSIGRSIAAIAQSQLAKELGPSSSFEPYQANLQRPVTVITEEGVPPSSSLKNELEKEIPLSTYPYPKSLKETIKLGPKTDPTSSWVKMQSLLEAPLQAENYQQKFQLLLHLEEIQMEVDIRRYDMQEVTMVQDRTLLVLDVPGVAENRPSVLRGDHLFVSLSSERDSSPLIQYKGYVHDVELEKVRLGFSSKLMKKFVNQLKFDVTFTFSRLPLQVQHRAAALSMQQGLASLLFPSASCNRSLFTGTYQPRWFDCKLQANEEQCRAVTHIVTGMSRPAPYLIFGPPGTGKTVTLVEAIKQVWACFKDARILACAPSNSAADLLCQRLITDIAPRYIYRIMASSRSYREVPAEIRPCCNWDDEQNCYVYPSKEFLGRYRIIITTLVTAGRLASANFPPGYFSHVFIDECGHAVEPESVVAIAGLLTAMDQETNPNGGQLVLAGDPQQLGPVLRSPLATQHGLGTSLLERLMLHNVLYEKSSDGYNPQFVTKLLWNYRSHEAILRIPNELFYDSELKACEGDEFDIRNFYCAWEQLPKKGFPIIFHGVCGEDQREAKSPSFFNTAEIEILVQYLKKLLQSQGKRGCPTISPKEIGIISPYRKQVEKIQKAVTVHDPVLKALPDIRKLKVGSVEEFQGQERRVILISTVRSCSEYFQLDQTFNLGFLKNPKRLNVAITRAKALLIVVGNPAVLSKDPHWHRFLRYCKEEGGYTGYPYEEETPEEDSLAAHLNSLHLST
SIO_010081: MOV10
subclass of: SO_0000673
so part of: MOV10
location: complement(join(778792..778906,778995..779083,779220..779345,779451..779525,779608..779799,779878..780001,780232..780334,780412..780531,780621..780718,780904..781007,781099..781260,781347..781494,781592..781768,781909..782063,782173..782326,782442..782564,782805..783045,783126..783364,783456..783586,783733..783829,784615..784748))
location: region:778792-784748:-1
so has part: feature:784615-784748:-1:exon
so has part: feature:783733-783829:-1:exon
so has part: feature:783456-783586:-1:exon
so has part: feature:783126-783364:-1:exon
so has part: feature:782805-783045:-1:exon
so has part: feature:782442-782564:-1:exon
so has part: feature:782173-782326:-1:exon
so has part: feature:781909-782063:-1:exon
so has part: feature:781592-781768:-1:exon
so has part: feature:781347-781494:-1:exon
so has part: feature:781099-781260:-1:exon
so has part: feature:780904-781007:-1:exon
so has part: feature:780621-780718:-1:exon
so has part: feature:780412-780531:-1:exon
so has part: feature:780232-780334:-1:exon
so has part: feature:779878-780001:-1:exon
so has part: feature:779608-779799:-1:exon
so has part: feature:779451-779525:-1:exon
so has part: feature:779220-779345:-1:exon
so has part: feature:778995-779083:-1:exon
so has part: feature:778792-778906:-1:exon

XP_035417318.1
type: Protein
SIO_000068: ncbiprotein

position:778792:-1
position: 778792
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:784748:-1
position: 784748
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:784615-784748:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:783733-783829:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:783456-783586:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:783126-783364:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:782805-783045:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:782442-782564:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:782173-782326:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:781909-782063:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:781592-781768:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:781347-781494:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:781099-781260:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:780904-781007:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:780621-780718:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:780412-780531:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:780232-780334:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:779878-780001:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:779608-779799:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:779451-779525:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:779220-779345:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:778995-779083:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:778792-778906:-1:exon

CAPZA1
type: Gene
subclass of: SO_0000704
RO_0002162: 8868
gene: CAPZA1
note: capping actin protein of muscle Z-line subunit alpha 1; Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(786901..799227)
location: region:786901-799227:-1
so has part: feature:786901-799227:-1:exon
subclass of: SO_0000010

118255262
type: Gene
SIO_000068: ncbigene

position:786901:-1
position: 786901
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:799227:-1
position: 799227
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:786901-799227:-1:exon

CAPZA1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8868
gene: CAPZA1
product: capping actin protein of muscle Z-line subunit alpha 1
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_035561331.2
SIO_010081: CAPZA1
subclass of: SO_0000673
so part of: CAPZA1
location: complement(join(786901..788442,789021..789083,789704..789775,790256..790334,790768..790847,791262..791468,792748..792811,793635..793686,793933..793996,799098..799227))
location: region:786901-799227:-1
so has part: feature:799098-799227:-1:exon
so has part: feature:793933-793996:-1:exon
so has part: feature:793635-793686:-1:exon
so has part: feature:792748-792811:-1:exon
so has part: feature:791262-791468:-1:exon
so has part: feature:790768-790847:-1:exon
so has part: feature:790256-790334:-1:exon
so has part: feature:789704-789775:-1:exon
so has part: feature:789021-789083:-1:exon
so has part: feature:786901-788442:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:799098-799227:-1:exon

position:799098:-1
position: 799098
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:793933-793996:-1:exon

position:793933:-1
position: 793933
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:793996:-1
position: 793996
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:793635-793686:-1:exon

position:793635:-1
position: 793635
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:793686:-1
position: 793686
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:792748-792811:-1:exon

position:792748:-1
position: 792748
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:792811:-1
position: 792811
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:791262-791468:-1:exon

position:791262:-1
position: 791262
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:791468:-1
position: 791468
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:790768-790847:-1:exon

position:790768:-1
position: 790768
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:790847:-1
position: 790847
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:790256-790334:-1:exon

position:790256:-1
position: 790256
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:790334:-1
position: 790334
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:789704-789775:-1:exon

position:789704:-1
position: 789704
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:789775:-1
position: 789775
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:789021-789083:-1:exon

position:789021:-1
position: 789021
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:789083:-1
position: 789083
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:786901-788442:-1:exon

position:788442:-1
position: 788442
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

CAPZA1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8868
gene: CAPZA1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: F-actin-capping protein subunit alpha-1
translation: MADLEERVSDDEKVRIAAKFITHAPPGEFNEVFNDVRLLLNNDNLLREGAAHAFAQYNMDQFTPVKIEGYDDQVLITEHGDLGNGRFLDPRNKISFKFDHLRKEASDPQPEDTESALKQWRDACDSALRAYVKDHYPNGFCTVYGKSIDGQQTIIACIESHQFQPKNFWNGRWRSEWKFTITPPTAQVAAVLKIQVHYYEDGNVQLVSHKDIQDSVQVSSDVQTAKEFIKIIENAENEYQTAISENYQTMSDTTFKALRRQLPVTRTKIDWNKILSYKIGKEMQNA
SIO_010081: CAPZA1
subclass of: SO_0000673
so part of: CAPZA1
location: complement(join(788302..788442,789021..789083,789704..789775,790256..790334,790768..790847,791262..791468,792748..792811,793635..793686,793933..793996,799098..799136))
location: region:788302-799136:-1
so has part: feature:799098-799136:-1:exon
so has part: feature:793933-793996:-1:exon
so has part: feature:793635-793686:-1:exon
so has part: feature:792748-792811:-1:exon
so has part: feature:791262-791468:-1:exon
so has part: feature:790768-790847:-1:exon
so has part: feature:790256-790334:-1:exon
so has part: feature:789704-789775:-1:exon
so has part: feature:789021-789083:-1:exon
so has part: feature:788302-788442:-1:exon

XP_035417224.1
type: Protein
SIO_000068: ncbiprotein

position:788302:-1
position: 788302
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:799136:-1
position: 799136
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:799098-799136:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:793933-793996:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:793635-793686:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:792748-792811:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:791262-791468:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:790768-790847:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:790256-790334:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:789704-789775:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:789021-789083:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:788302-788442:-1:exon

ST7L
type: Gene
subclass of: SO_0000704
RO_0002162: 8868
gene: ST7L
note: suppression of tumorigenicity 7 like; Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 798430..821298
location: region:798430-821298:1
so has part: feature:798430-821298:1:exon
subclass of: SO_0000010

118255261
type: Gene
SIO_000068: ncbigene

position:798430:1
position: 798430
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:821298:1
position: 821298
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:798430-821298:1:exon

ST7L
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8868
gene: ST7L
product: suppression of tumorigenicity 7 like
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_035561330.2
SIO_010081: ST7L
subclass of: SO_0000673
so part of: ST7L
location: join(798430..798492,799991..800073,800735..800894,801432..801486,802158..802273,803813..803891,804659..804813,805333..805430,806071..806185,807974..808046,808727..808829,811909..812059,812197..812289,815034..815173,820461..820532,820752..821298)
location: region:798430-821298:1
so has part: feature:798430-798492:1:exon
so has part: feature:799991-800073:1:exon
so has part: feature:800735-800894:1:exon
so has part: feature:801432-801486:1:exon
so has part: feature:802158-802273:1:exon
so has part: feature:803813-803891:1:exon
so has part: feature:804659-804813:1:exon
so has part: feature:805333-805430:1:exon
so has part: feature:806071-806185:1:exon
so has part: feature:807974-808046:1:exon
so has part: feature:808727-808829:1:exon
so has part: feature:811909-812059:1:exon
so has part: feature:812197-812289:1:exon
so has part: feature:815034-815173:1:exon
so has part: feature:820461-820532:1:exon
so has part: feature:820752-821298:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:798430-798492:1:exon

position:798492:1
position: 798492
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:799991-800073:1:exon

position:799991:1
position: 799991
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:800073:1
position: 800073
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:800735-800894:1:exon

position:800735:1
position: 800735
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:800894:1
position: 800894
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:801432-801486:1:exon

position:801432:1
position: 801432
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:801486:1
position: 801486
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:802158-802273:1:exon

position:802158:1
position: 802158
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:802273:1
position: 802273
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:803813-803891:1:exon

position:803813:1
position: 803813
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:803891:1
position: 803891
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:804659-804813:1:exon

position:804659:1
position: 804659
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:804813:1
position: 804813
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:805333-805430:1:exon

position:805333:1
position: 805333
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:805430:1
position: 805430
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:806071-806185:1:exon

position:806071:1
position: 806071
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:806185:1
position: 806185
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:807974-808046:1:exon

position:807974:1
position: 807974
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:808046:1
position: 808046
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:808727-808829:1:exon

position:808727:1
position: 808727
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:808829:1
position: 808829
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:811909-812059:1:exon

position:811909:1
position: 811909
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:812059:1
position: 812059
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:812197-812289:1:exon

position:812197:1
position: 812197
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:812289:1
position: 812289
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:815034-815173:1:exon

position:815034:1
position: 815034
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:815173:1
position: 815173
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:820461-820532:1:exon

position:820461:1
position: 820461
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:820532:1
position: 820532
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:820752-821298:1:exon

position:820752:1
position: 820752
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

ST7L
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8868
gene: ST7L
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: suppressor of tumorigenicity 7 protein-like
translation: MPTVTVFLSTLTPKFYFALTVTSSFISGLIFVFEWWHFRKYGTSFIEQVSVSHLRPLIGGVENSPPAPAAFSVGENETNRQNMPECKVWRNPLNLFRGAEYSRYTWVTGKEPLTYYDMNLSAQDHQNFFTCDTDALRPSDTVMQKAWRERNPQARIKAAYQALELNNDCATAYVLLAEEEATTIVDAEKYFKQALKAGEMIYRKSQNCHSQSPQHEAQLRRDTNVLVYVKRRLAMCARKLGRIREAVKMMRDLMKEFPLLSMLNIHENLLEALLELQAYADVQAVLAKYDDISLPKSAAICYTAALLKARAVSERFSPETASKRGLSTAEINAVEAIHRAVEFNPHVPKYLLEMKSLVLPPEHILKRGDSEAVAYAFFHLQHWKRIEGALNLLHCTWEGTFRMIPYPLEKGHLFYPYPSCTETADRELLPTFHEVSVYPQKELPFFIHFTAGLCSFSAMLALLTHQFPELMVIFAKAVLRVLWPVSAPSVLASG
SIO_010081: ST7L
subclass of: SO_0000673
so part of: ST7L
location: join(798483..798492,799991..800073,800735..800894,801432..801486,802158..802273,803813..803891,804659..804813,805333..805430,806071..806185,807974..808046,808727..808829,811909..812059,812197..812289,815034..815173,820461..820514)
location: region:798483-820514:1
so has part: feature:798483-798492:1:exon
so has part: feature:799991-800073:1:exon
so has part: feature:800735-800894:1:exon
so has part: feature:801432-801486:1:exon
so has part: feature:802158-802273:1:exon
so has part: feature:803813-803891:1:exon
so has part: feature:804659-804813:1:exon
so has part: feature:805333-805430:1:exon
so has part: feature:806071-806185:1:exon
so has part: feature:807974-808046:1:exon
so has part: feature:808727-808829:1:exon
so has part: feature:811909-812059:1:exon
so has part: feature:812197-812289:1:exon
so has part: feature:815034-815173:1:exon
so has part: feature:820461-820514:1:exon

XP_035417223.1
type: Protein
SIO_000068: ncbiprotein

position:798483:1
position: 798483
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:820514:1
position: 820514
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:798483-798492:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:799991-800073:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:800735-800894:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:801432-801486:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:802158-802273:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:803813-803891:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:804659-804813:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:805333-805430:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:806071-806185:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:807974-808046:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:808727-808829:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:811909-812059:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:812197-812289:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:815034-815173:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:820461-820514:1:exon

WNT2B
type: Gene
subclass of: SO_0000704
RO_0002162: 8868
gene: WNT2B
note: Wnt family member 2B; Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(830353..846355)
location: region:830353-846355:-1
so has part: feature:830353-846355:-1:exon
subclass of: SO_0000010

118255263
type: Gene
SIO_000068: ncbigene

position:830353:-1
position: 830353
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:846355:-1
position: 846355
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:830353-846355:-1:exon

WNT2B
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8868
gene: WNT2B
product: Wnt family member 2B
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 47 Proteins
transcript id: XM_035561333.1
SIO_010081: WNT2B
subclass of: SO_0000673
so part of: WNT2B
location: complement(join(830353..830582,831569..831833,832301..832578,834935..835155,846192..846355))
location: region:830353-846355:-1
so has part: feature:846192-846355:-1:exon
so has part: feature:834935-835155:-1:exon
so has part: feature:832301-832578:-1:exon
so has part: feature:831569-831833:-1:exon
so has part: feature:830353-830582:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:846192-846355:-1:exon

position:846192:-1
position: 846192
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:834935-835155:-1:exon

position:834935:-1
position: 834935
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:835155:-1
position: 835155
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:832301-832578:-1:exon

position:832301:-1
position: 832301
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:832578:-1
position: 832578
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:831569-831833:-1:exon

position:831569:-1
position: 831569
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:831833:-1
position: 831833
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:830353-830582:-1:exon

position:830582:-1
position: 830582
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

WNT2B
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8868
gene: WNT2B
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protein Wnt-2b
translation: MLSTNRLEAPPGIAVAPGRAECGAFPRTAGAAPRIYLPFVLILLALPPRADCSWWYIGALGARVICDNIPGLVNKQRQLCQRYPDIMQSVGEGAKEWIRECQHQFRHHRWNCSTLDRDHTVFGRVMLRSSREAAFVYAISSAGVVYAITRACSQGDLKACGCDPLKRGRAKDERGEFDWGGCSDNINYGIRFAKAFVDAKEKKVKDARALMNLHNNRCGRMAVKRFLKLECKCHGVSGSCTLRTCWLAMSDFRKTGDYLRKKYNGAIQVIMNQDGTGFTVANKNFRKPTKTDLVYFENSPDYCVMDKSAGSLGTAGRVCNKMSRGTDGCEVMCCGRGYDTTRVTRVTKCECKFHWCCAVRCKECEDTVDVHTCKAPKRAEWLDQT
SIO_010081: WNT2B
subclass of: SO_0000673
so part of: WNT2B
location: complement(join(830353..830582,831569..831833,832301..832578,834935..835155,846192..846355))
location: region:830353-846355:-1
so has part: feature:846192-846355:-1:exon
so has part: feature:834935-835155:-1:exon
so has part: feature:832301-832578:-1:exon
so has part: feature:831569-831833:-1:exon
so has part: feature:830353-830582:-1:exon

XP_035417226.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:846192-846355:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:834935-835155:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:832301-832578:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:831569-831833:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:830353-830582:-1:exon

CTTNBP2NL
type: Gene
subclass of: SO_0000704
RO_0002162: 8868
gene: CTTNBP2NL
note: CTTNBP2 N-terminal like; Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(880841..902038)
location: region:880841-902038:-1
so has part: feature:880841-902038:-1:exon
subclass of: SO_0000010

118255417
type: Gene
SIO_000068: ncbigene

position:880841:-1
position: 880841
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:902038:-1
position: 902038
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:880841-902038:-1:exon

CTTNBP2NL
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8868
gene: CTTNBP2NL
product: CTTNBP2 N-terminal like, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 77 long SRA reads, 7 Proteins
transcript id: XM_035561591.2
SIO_010081: CTTNBP2NL
subclass of: SO_0000673
so part of: CTTNBP2NL
location: complement(join(880841..884947,885788..885895,888062..888292,898246..898353,901956..902038))
location: region:880841-902038:-1
so has part: feature:901956-902038:-1:exon
so has part: feature:898246-898353:-1:exon
so has part: feature:888062-888292:-1:exon
so has part: feature:885788-885895:-1:exon
so has part: feature:880841-884947:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:901956-902038:-1:exon

position:901956:-1
position: 901956
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:898246-898353:-1:exon

position:898246:-1
position: 898246
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:898353:-1
position: 898353
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:888062-888292:-1:exon

position:888062:-1
position: 888062
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:888292:-1
position: 888292
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:885788-885895:-1:exon

position:885788:-1
position: 885788
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:885895:-1
position: 885895
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:880841-884947:-1:exon

position:884947:-1
position: 884947
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

CTTNBP2NL
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8868
gene: CTTNBP2NL
product: CTTNBP2 N-terminal like, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 16 long SRA reads, 7 Proteins
transcript id: XM_035561592.2
SIO_010081: CTTNBP2NL
subclass of: SO_0000673
so part of: CTTNBP2NL
location: complement(join(880849..884947,885788..885895,888062..888292,898246..898353,898713..898876,901391..901463))
location: region:880849-901463:-1
so has part: feature:901391-901463:-1:exon
so has part: feature:898713-898876:-1:exon
so has part: feature:898246-898353:-1:exon
so has part: feature:888062-888292:-1:exon
so has part: feature:885788-885895:-1:exon
so has part: feature:880849-884947:-1:exon

position:880849:-1
position: 880849
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:901463:-1
position: 901463
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:901391-901463:-1:exon

position:901391:-1
position: 901391
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:898713-898876:-1:exon

position:898713:-1
position: 898713
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:898876:-1
position: 898876
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:898246-898353:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:888062-888292:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:885788-885895:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:880849-884947:-1:exon

CTTNBP2NL
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8868
gene: CTTNBP2NL
product: CTTNBP2 N-terminal like, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 24 long SRA reads, 7 Proteins
transcript id: XM_035561590.2
SIO_010081: CTTNBP2NL
subclass of: SO_0000673
so part of: CTTNBP2NL
location: complement(join(880855..884947,885788..885895,888062..888292,898246..898353,901992..902038))
location: region:880855-902038:-1
so has part: feature:901992-902038:-1:exon
so has part: feature:898246-898353:-1:exon
so has part: feature:888062-888292:-1:exon
so has part: feature:885788-885895:-1:exon
so has part: feature:880855-884947:-1:exon

position:880855:-1
position: 880855
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:901992-902038:-1:exon

position:901992:-1
position: 901992
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:898246-898353:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:888062-888292:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:885788-885895:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:880855-884947:-1:exon

CTTNBP2NL
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8868
gene: CTTNBP2NL
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: CTTNBP2 N-terminal-like protein
translation: MNLEKLSKPELLTLFSILEGELEARDLVIEALKAQHRDTFIEERYGKYNISDPLMALQRDFETLKEGNHGEKQPVCSNPLSILKVVMKHCKNMQERMLSQLAAAESRHRKVILDLEEERQRHAQDTAEGDDVTYMLEKERERLTQQLEFEKSQVKKFEKEQKKLSSQLEEERARHKQLSSVLVVECKKATAKAAEEGQKTAELSLKLEKEKSKVSKLEEELASKRKRGLQMEAQVEKQLSEFDIEREQLKAKLNREENRTKALKEEVECLKKALKELEAACQEHSPTEPLQPSPSVMSRGVATDSPAVKSVSCQTECPQADRANPASTSKAVHTVFPSPTTPTHSYAKSNGHCNTDMQTGSELLQTNAAESQAQKEKYAGTTLENTVENGSSPVRTESPVHLMSQLPSSGVSLSPSSTAASSLTPSPCSSPVLTKRLVGASASSPGYQSSYQVGINQRFHAARHKFQSQAEQDHQSSGLQSPPSRDLSPTLADNSAAKQLARNTVTQVLSRFTSQQGAIKPVSPNSSPFGTDYRNLANAVSPKNESGHSPSPGKVSSPLSPLSPGIKSPTIPRAERGNPPPIPPKKPGLAQSPAAPAPLTKTSSQASSLGAPMDVASSCSNNTVVSNGKDMEILLPTSS
SIO_010081: CTTNBP2NL
subclass of: SO_0000673
so part of: CTTNBP2NL
location: complement(join(883466..884947,885788..885895,888062..888292,898246..898344))
location: region:883466-898344:-1
so has part: feature:898246-898344:-1:exon
so has part: feature:888062-888292:-1:exon
so has part: feature:885788-885895:-1:exon
so has part: feature:883466-884947:-1:exon

XP_035417484.1
type: Protein
SIO_000068: ncbiprotein

position:883466:-1
position: 883466
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:898344:-1
position: 898344
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:898246-898344:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:888062-888292:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:885788-885895:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:883466-884947:-1:exon

CTTNBP2NL
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8868
gene: CTTNBP2NL
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: CTTNBP2 N-terminal-like protein
translation: MNLEKLSKPELLTLFSILEGELEARDLVIEALKAQHRDTFIEERYGKYNISDPLMALQRDFETLKEGNHGEKQPVCSNPLSILKVVMKHCKNMQERMLSQLAAAESRHRKVILDLEEERQRHAQDTAEGDDVTYMLEKERERLTQQLEFEKSQVKKFEKEQKKLSSQLEEERARHKQLSSVLVVECKKATAKAAEEGQKTAELSLKLEKEKSKVSKLEEELASKRKRGLQMEAQVEKQLSEFDIEREQLKAKLNREENRTKALKEEVECLKKALKELEAACQEHSPTEPLQPSPSVMSRGVATDSPAVKSVSCQTECPQADRANPASTSKAVHTVFPSPTTPTHSYAKSNGHCNTDMQTGSELLQTNAAESQAQKEKYAGTTLENTVENGSSPVRTESPVHLMSQLPSSGVSLSPSSTAASSLTPSPCSSPVLTKRLVGASASSPGYQSSYQVGINQRFHAARHKFQSQAEQDHQSSGLQSPPSRDLSPTLADNSAAKQLARNTVTQVLSRFTSQQGAIKPVSPNSSPFGTDYRNLANAVSPKNESGHSPSPGKVSSPLSPLSPGIKSPTIPRAERGNPPPIPPKKPGLAQSPAAPAPLTKTSSQASSLGAPMDVASSCSNNTVVSNGKDMEILLPTSS
SIO_010081: CTTNBP2NL
subclass of: SO_0000673
so part of: CTTNBP2NL
location: complement(join(883466..884947,885788..885895,888062..888292,898246..898344))
location: region:883466-898344:-1
so has part: feature:898246-898344:-1:exon
so has part: feature:888062-888292:-1:exon
so has part: feature:885788-885895:-1:exon
so has part: feature:883466-884947:-1:exon

XP_035417485.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:898246-898344:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:888062-888292:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:885788-885895:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:883466-884947:-1:exon

CTTNBP2NL
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8868
gene: CTTNBP2NL
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: CTTNBP2 N-terminal-like protein
translation: MNLEKLSKPELLTLFSILEGELEARDLVIEALKAQHRDTFIEERYGKYNISDPLMALQRDFETLKEGNHGEKQPVCSNPLSILKVVMKHCKNMQERMLSQLAAAESRHRKVILDLEEERQRHAQDTAEGDDVTYMLEKERERLTQQLEFEKSQVKKFEKEQKKLSSQLEEERARHKQLSSVLVVECKKATAKAAEEGQKTAELSLKLEKEKSKVSKLEEELASKRKRGLQMEAQVEKQLSEFDIEREQLKAKLNREENRTKALKEEVECLKKALKELEAACQEHSPTEPLQPSPSVMSRGVATDSPAVKSVSCQTECPQADRANPASTSKAVHTVFPSPTTPTHSYAKSNGHCNTDMQTGSELLQTNAAESQAQKEKYAGTTLENTVENGSSPVRTESPVHLMSQLPSSGVSLSPSSTAASSLTPSPCSSPVLTKRLVGASASSPGYQSSYQVGINQRFHAARHKFQSQAEQDHQSSGLQSPPSRDLSPTLADNSAAKQLARNTVTQVLSRFTSQQGAIKPVSPNSSPFGTDYRNLANAVSPKNESGHSPSPGKVSSPLSPLSPGIKSPTIPRAERGNPPPIPPKKPGLAQSPAAPAPLTKTSSQASSLGAPMDVASSCSNNTVVSNGKDMEILLPTSS
SIO_010081: CTTNBP2NL
subclass of: SO_0000673
so part of: CTTNBP2NL
location: complement(join(883466..884947,885788..885895,888062..888292,898246..898344))
location: region:883466-898344:-1
so has part: feature:898246-898344:-1:exon
so has part: feature:888062-888292:-1:exon
so has part: feature:885788-885895:-1:exon
so has part: feature:883466-884947:-1:exon

XP_035417483.2
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:898246-898344:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:888062-888292:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:885788-885895:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:883466-884947:-1:exon

KCND3
type: Gene
subclass of: SO_0000704
RO_0002162: 8868
gene: KCND3
note: potassium voltage-gated channel subfamily D member 3; Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1038807..1153688
location: region:1038807-1153688:1
so has part: feature:1038807-1153688:1:exon
subclass of: SO_0000010

118255390
type: Gene
SIO_000068: ncbigene

position:1038807:1
position: 1038807
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1153688:1
position: 1153688
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1038807-1153688:1:exon

KCND3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8868
gene: KCND3
product: potassium voltage-gated channel subfamily D member 3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 7 Proteins
transcript id: XM_035561553.1
SIO_010081: KCND3
subclass of: SO_0000673
so part of: KCND3
location: join(1038807..1038891,1042303..1043487,1126217..1126379,1140534..1140635,1147452..1147544,1150269..1150325,1151276..1151523,1153484..1153688)
location: region:1038807-1153688:1
so has part: feature:1038807-1038891:1:exon
so has part: feature:1042303-1043487:1:exon
so has part: feature:1126217-1126379:1:exon
so has part: feature:1140534-1140635:1:exon
so has part: feature:1147452-1147544:1:exon
so has part: feature:1150269-1150325:1:exon
so has part: feature:1151276-1151523:1:exon
so has part: feature:1153484-1153688:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1038807-1038891:1:exon

position:1038891:1
position: 1038891
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1042303-1043487:1:exon

position:1042303:1
position: 1042303
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1043487:1
position: 1043487
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1126217-1126379:1:exon

position:1126217:1
position: 1126217
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1126379:1
position: 1126379
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1140534-1140635:1:exon

position:1140534:1
position: 1140534
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1140635:1
position: 1140635
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1147452-1147544:1:exon

position:1147452:1
position: 1147452
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1147544:1
position: 1147544
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1150269-1150325:1:exon

position:1150269:1
position: 1150269
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1150325:1
position: 1150325
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1151276-1151523:1:exon

position:1151276:1
position: 1151276
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1151523:1
position: 1151523
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1153484-1153688:1:exon

position:1153484:1
position: 1153484
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

KCND3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8868
gene: KCND3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: potassium voltage-gated channel subfamily D member 3
translation: MAAGVAAWLPFARAAAIGWMPVANCPMPLAPTEKNKRQDELIILNVSGRRFQTWRTTLERYPDTLLGSTEKEFFFNEDTKEYFFDRDPEVFRCILNFYRTGKLHYPRYECISAYDEELAFYGILPEIIGDCCYEEYKDRKRENAERLMDDNDSENNQEGSMPSLSFRQTMWRAFENPHTSTLALVFYYVTGFFIAVSVITNVVETVPCGTVPGNKELPCGERYAVAFFCLDTACVMIFTVEYLLRLFAAPSRYRFIRSVMSIIDVVAIMPYYIGLVMTNNEDVSGAFVTLRVFRVFRIFKFSRHSQGLRILGYTLKSCASELGFLLFSLTMAIIIFATVMFYAEKGSSASKFTSIPASFWYTIVTMTTLGYGDMVPKTIAGKIFGSICSLSGVLVIALPVPVIVSNFSRIYHQNQRADKRRAQKKARLARIRVAKTGSSNAYLHSKRNGLLNEALELTGSTEDEQRMTKGTSLIESQHHHLLHCLEKTTGLSYLVDDPLLSVRTSTIKNHEFIDEQLFEQNCMESSMQNYPSSRSPSLSSHHGLTTSCCSRRNKKTTHLPNSSVPATRLRSMQELSTIHIQCSEQPSLTTSRSSLNMKSDDGLRPNCKAAQITTAIISIPTPPALTPEGESRPPPSSPGHSTNISTTTTSNIVKVSAL
SIO_010081: KCND3
subclass of: SO_0000673
so part of: KCND3
location: join(1042379..1043487,1126217..1126379,1140534..1140635,1147452..1147544,1150269..1150325,1151276..1151523,1153484..1153688)
location: region:1042379-1153688:1
so has part: feature:1042379-1043487:1:exon
so has part: feature:1126217-1126379:1:exon
so has part: feature:1140534-1140635:1:exon
so has part: feature:1147452-1147544:1:exon
so has part: feature:1150269-1150325:1:exon
so has part: feature:1151276-1151523:1:exon
so has part: feature:1153484-1153688:1:exon

XP_035417446.1
type: Protein
SIO_000068: ncbiprotein

position:1042379:1
position: 1042379
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1042379-1043487:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1126217-1126379:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1140534-1140635:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1147452-1147544:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1150269-1150325:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1151276-1151523:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1153484-1153688:1:exon

DDX20
type: Gene
subclass of: SO_0000704
RO_0002162: 8868
gene: DDX20
note: DEAD-box helicase 20; Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1161624..1167619)
location: region:1161624-1167619:-1
so has part: feature:1161624-1167619:-1:exon
subclass of: SO_0000010

118255407
type: Gene
SIO_000068: ncbigene

position:1161624:-1
position: 1161624
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1167619:-1
position: 1167619
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1161624-1167619:-1:exon

DDX20
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8868
gene: DDX20
product: DEAD-box helicase 20
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_035561576.1
SIO_010081: DDX20
subclass of: SO_0000673
so part of: DDX20
location: complement(join(1161624..1162949,1163653..1163754,1163841..1163946,1164667..1164749,1165456..1165514,1165850..1165988,1166248..1166390,1166472..1166586,1166881..1167049,1167165..1167259,1167358..1167619))
location: region:1161624-1167619:-1
so has part: feature:1167358-1167619:-1:exon
so has part: feature:1167165-1167259:-1:exon
so has part: feature:1166881-1167049:-1:exon
so has part: feature:1166472-1166586:-1:exon
so has part: feature:1166248-1166390:-1:exon
so has part: feature:1165850-1165988:-1:exon
so has part: feature:1165456-1165514:-1:exon
so has part: feature:1164667-1164749:-1:exon
so has part: feature:1163841-1163946:-1:exon
so has part: feature:1163653-1163754:-1:exon
so has part: feature:1161624-1162949:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1167358-1167619:-1:exon

position:1167358:-1
position: 1167358
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1167165-1167259:-1:exon

position:1167165:-1
position: 1167165
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1167259:-1
position: 1167259
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1166881-1167049:-1:exon

position:1166881:-1
position: 1166881
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1167049:-1
position: 1167049
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1166472-1166586:-1:exon

position:1166472:-1
position: 1166472
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1166586:-1
position: 1166586
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1166248-1166390:-1:exon

position:1166248:-1
position: 1166248
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1166390:-1
position: 1166390
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1165850-1165988:-1:exon

position:1165850:-1
position: 1165850
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1165988:-1
position: 1165988
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1165456-1165514:-1:exon

position:1165456:-1
position: 1165456
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1165514:-1
position: 1165514
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1164667-1164749:-1:exon

position:1164667:-1
position: 1164667
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1164749:-1
position: 1164749
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:1163841-1163946:-1:exon

position:1163841:-1
position: 1163841
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1163946:-1
position: 1163946
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:1163653-1163754:-1:exon

position:1163653:-1
position: 1163653
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1163754:-1
position: 1163754
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:1161624-1162949:-1:exon

position:1162949:-1
position: 1162949
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

DDX20
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8868
gene: DDX20
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: probable ATP-dependent RNA helicase DDX20
translation: MAAPAEAAGGRERFCTRDVAVPGGPSDFGSLLLSAPVLAGLEAAGFHRPSPVQLKAIPLGRCGLDLIVQAKSGTGKTCVFSTIALDALMLESPATQALILAPTREIAVQIHAVITTIGIKLEGLECHVFIGGTPLNQDKIRLKKCHIAVGSPGRIKQLIELDYLNTASIRLFILDEADKLLEEGSFQEQINWIYSSLPDNKQMLAVSATYPESLANALTRYMREPTFVRLNPTDPSLIGLKQYYKIVNSHPLPHKTFEEKTQHLQELFSKIPFNQALVFSNLHSRAQHLAEILTSRGFPAECISGSMNQNQRLDAMAKLKQFHCRVLISTDLTSRGIDAEKVNLVINLDVPVDWETYMHRIGRAGRFGTLGLSVTYCCRGEEENMMMKIAQKCNLRLLPLPEPIPPGMMDQFEDCEVEVKPVVYTGASVNSDTVPLKSEEPVLQSVQNSFVEVRQPHSDLPGENSVERPKKALKQKLVKKCRNSANVEKGSRNPKTSSCNTEQKNRVETVSRIGVQSNNMGAPDEEALKKNLPRIPCLSSFKNQQNNPWNFSEFVEDYEYFIKEGLERDVEILRSYSGPGEQCELPRNGDVEWKEMEHNTETVANGVSGDSDGSYSSRASSNSSENNSCFEAFSDTQKNAVPTMHQGLTGFCPTPEKSKELSQVPKQNKAKKKIPKQNSKQKRNHYHQCPNPSTRKTEDACSCGSWDDAVPGFLQEAWSYKNYWKSYYQAWQNYYAAVSHMHYRKSYRQFNWMNAYHVNSVYLQELLNSGD
SIO_010081: DDX20
subclass of: SO_0000673
so part of: DDX20
location: complement(join(1161838..1162949,1163653..1163754,1163841..1163946,1164667..1164749,1165456..1165514,1165850..1165988,1166248..1166390,1166472..1166586,1166881..1167049,1167165..1167259,1167358..1167550))
location: region:1161838-1167550:-1
so has part: feature:1167358-1167550:-1:exon
so has part: feature:1167165-1167259:-1:exon
so has part: feature:1166881-1167049:-1:exon
so has part: feature:1166472-1166586:-1:exon
so has part: feature:1166248-1166390:-1:exon
so has part: feature:1165850-1165988:-1:exon
so has part: feature:1165456-1165514:-1:exon
so has part: feature:1164667-1164749:-1:exon
so has part: feature:1163841-1163946:-1:exon
so has part: feature:1163653-1163754:-1:exon
so has part: feature:1161838-1162949:-1:exon

XP_035417469.1
type: Protein
SIO_000068: ncbiprotein

position:1161838:-1
position: 1161838
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1167550:-1
position: 1167550
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1167358-1167550:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1167165-1167259:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1166881-1167049:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1166472-1166586:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1166248-1166390:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1165850-1165988:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1165456-1165514:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1164667-1164749:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1163841-1163946:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1163653-1163754:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1161838-1162949:-1:exon

INKA2
type: Gene
subclass of: SO_0000704
RO_0002162: 8868
gene: INKA2
note: inka box actin regulator 2; Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1177387..1187747
location: region:1177387-1187747:1
so has part: feature:1177387-1187747:1:exon
subclass of: SO_0000010

118255402
type: Gene
SIO_000068: ncbigene

position:1177387:1
position: 1177387
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1187747:1
position: 1187747
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1177387-1187747:1:exon

INKA2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8868
gene: INKA2
product: inka box actin regulator 2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins
transcript id: XM_035561570.1
SIO_010081: INKA2
subclass of: SO_0000673
so part of: INKA2
location: join(1177387..1177422,1186776..1187747)
location: region:1177387-1187747:1
so has part: feature:1177387-1177422:1:exon
so has part: feature:1186776-1187747:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1177387-1177422:1:exon

position:1177422:1
position: 1177422
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1186776-1187747:1:exon

position:1186776:1
position: 1186776
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

INKA2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8868
gene: INKA2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: PAK4-inhibitor INKA2
translation: MEQHLRRLRQELLSMKEVGDGLHEQMNCMMGALQELKLLQVQTALEQLEISGSRSTSTEQRQCCRSSGAGPRGRAAAEGCSPTSLTCVVPQPASLPHPTVLPESGHLGDTSSYSSSSSTCGKVASHTQAPSSAPARAERVHLRTFEPSSQGMAGGWPTCQECPGCDDGHDWTSSLMSQSRNRQPLVLGDNIFADLVGNWLDLPELDKKGEKSEASLSASRSQELCRKFSLTANIFKKFLRSVRPDRDRLLKEKPCWLPPEDKQPDISKRPKKMNKLKGTFYFPLHGNIQNHHNKVERCLKVEGSIKKPKTGTKKVHDTIDYTQSGFDINTAVWV
SIO_010081: INKA2
subclass of: SO_0000673
so part of: INKA2
location: join(1177387..1177422,1186776..1187744)
location: region:1177387-1187744:1
so has part: feature:1177387-1177422:1:exon
so has part: feature:1186776-1187744:1:exon

XP_035417463.1
type: Protein
SIO_000068: ncbiprotein

position:1187744:1
position: 1187744
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1177387-1177422:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1186776-1187744:1:exon

RAP1A
type: Gene
subclass of: SO_0000704
RO_0002162: 8868
gene: RAP1A
note: RAP1A, member of RAS oncogene family; Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1203260..1243636)
location: region:1203260-1243636:-1
so has part: feature:1203260-1243636:-1:exon
subclass of: SO_0000010

118255454
type: Gene
SIO_000068: ncbigene

position:1203260:-1
position: 1203260
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1243636:-1
position: 1243636
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1203260-1243636:-1:exon

RAP1A
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8868
gene: RAP1A
product: RAP1A, member of RAS oncogene family, transcript variant X1
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_035561648.2
SIO_010081: RAP1A
subclass of: SO_0000673
so part of: RAP1A
location: complement(join(1203260..1205212,1207395..1207510,1210726..1210869,1215584..1215724,1216500..1216556,1218156..1221901,1225859..1225928,1243522..1243636))
location: region:1203260-1243636:-1
so has part: feature:1243522-1243636:-1:exon
so has part: feature:1225859-1225928:-1:exon
so has part: feature:1218156-1221901:-1:exon
so has part: feature:1216500-1216556:-1:exon
so has part: feature:1215584-1215724:-1:exon
so has part: feature:1210726-1210869:-1:exon
so has part: feature:1207395-1207510:-1:exon
so has part: feature:1203260-1205212:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1243522-1243636:-1:exon

position:1243522:-1
position: 1243522
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1225859-1225928:-1:exon

position:1225859:-1
position: 1225859
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1225928:-1
position: 1225928
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1218156-1221901:-1:exon

position:1218156:-1
position: 1218156
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1221901:-1
position: 1221901
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1216500-1216556:-1:exon

position:1216500:-1
position: 1216500
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1216556:-1
position: 1216556
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1215584-1215724:-1:exon

position:1215584:-1
position: 1215584
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1215724:-1
position: 1215724
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1210726-1210869:-1:exon

position:1210726:-1
position: 1210726
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1210869:-1
position: 1210869
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1207395-1207510:-1:exon

position:1207395:-1
position: 1207395
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1207510:-1
position: 1207510
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1203260-1205212:-1:exon

position:1205212:-1
position: 1205212
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

RAP1A
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8868
gene: RAP1A
product: RAP1A, member of RAS oncogene family, transcript variant X3
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_035561652.2
SIO_010081: RAP1A
subclass of: SO_0000673
so part of: RAP1A
location: complement(join(1203260..1205212,1207395..1207510,1210726..1210869,1215584..1215724,1216500..1216556,1218156..1218224,1221818..1221901,1225859..1225928,1243522..1243625))
location: region:1203260-1243625:-1
so has part: feature:1243522-1243625:-1:exon
so has part: feature:1225859-1225928:-1:exon
so has part: feature:1221818-1221901:-1:exon
so has part: feature:1218156-1218224:-1:exon
so has part: feature:1216500-1216556:-1:exon
so has part: feature:1215584-1215724:-1:exon
so has part: feature:1210726-1210869:-1:exon
so has part: feature:1207395-1207510:-1:exon
so has part: feature:1203260-1205212:-1:exon

position:1243625:-1
position: 1243625
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1243522-1243625:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1225859-1225928:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1221818-1221901:-1:exon

position:1221818:-1
position: 1221818
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1218156-1218224:-1:exon

position:1218224:-1
position: 1218224
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1216500-1216556:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1215584-1215724:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1210726-1210869:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1207395-1207510:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1203260-1205212:-1:exon

RAP1A
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8868
gene: RAP1A
product: RAP1A, member of RAS oncogene family, transcript variant X6
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_050715406.1
SIO_010081: RAP1A
subclass of: SO_0000673
so part of: RAP1A
location: complement(join(1203260..1205212,1207395..1207510,1210726..1210869,1215584..1215724,1216500..1216556,1218156..1218224,1221818..1221901,1243522..1243614))
location: region:1203260-1243614:-1
so has part: feature:1243522-1243614:-1:exon
so has part: feature:1221818-1221901:-1:exon
so has part: feature:1218156-1218224:-1:exon
so has part: feature:1216500-1216556:-1:exon
so has part: feature:1215584-1215724:-1:exon
so has part: feature:1210726-1210869:-1:exon
so has part: feature:1207395-1207510:-1:exon
so has part: feature:1203260-1205212:-1:exon

position:1243614:-1
position: 1243614
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1243522-1243614:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1221818-1221901:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1218156-1218224:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1216500-1216556:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1215584-1215724:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1210726-1210869:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1207395-1207510:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1203260-1205212:-1:exon

RAP1A
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8868
gene: RAP1A
product: RAP1A, member of RAS oncogene family, transcript variant X4
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_035561653.2
SIO_010081: RAP1A
subclass of: SO_0000673
so part of: RAP1A
location: complement(join(1203260..1205212,1207395..1207510,1210726..1210869,1215584..1215724,1216500..1216556,1218156..1218224,1221818..1221901,1225859..1225928,1236780..1236887,1243522..1243609))
location: region:1203260-1243609:-1
so has part: feature:1243522-1243609:-1:exon
so has part: feature:1236780-1236887:-1:exon
so has part: feature:1225859-1225928:-1:exon
so has part: feature:1221818-1221901:-1:exon
so has part: feature:1218156-1218224:-1:exon
so has part: feature:1216500-1216556:-1:exon
so has part: feature:1215584-1215724:-1:exon
so has part: feature:1210726-1210869:-1:exon
so has part: feature:1207395-1207510:-1:exon
so has part: feature:1203260-1205212:-1:exon

position:1243609:-1
position: 1243609
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1243522-1243609:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1236780-1236887:-1:exon

position:1236780:-1
position: 1236780
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1236887:-1
position: 1236887
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1225859-1225928:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1221818-1221901:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1218156-1218224:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1216500-1216556:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1215584-1215724:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1210726-1210869:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1207395-1207510:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1203260-1205212:-1:exon

RAP1A
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8868
gene: RAP1A
product: RAP1A, member of RAS oncogene family, transcript variant X7
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_035561655.2
SIO_010081: RAP1A
subclass of: SO_0000673
so part of: RAP1A
location: complement(join(1203260..1205212,1207395..1207510,1210726..1210869,1215584..1215724,1216500..1216556,1218156..1218224,1221818..1221901,1225859..1225928,1241279..1242679))
location: region:1203260-1242679:-1
so has part: feature:1241279-1242679:-1:exon
so has part: feature:1225859-1225928:-1:exon
so has part: feature:1221818-1221901:-1:exon
so has part: feature:1218156-1218224:-1:exon
so has part: feature:1216500-1216556:-1:exon
so has part: feature:1215584-1215724:-1:exon
so has part: feature:1210726-1210869:-1:exon
so has part: feature:1207395-1207510:-1:exon
so has part: feature:1203260-1205212:-1:exon

position:1242679:-1
position: 1242679
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1241279-1242679:-1:exon

position:1241279:-1
position: 1241279
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1225859-1225928:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1221818-1221901:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1218156-1218224:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1216500-1216556:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1215584-1215724:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1210726-1210869:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1207395-1207510:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1203260-1205212:-1:exon

RAP1A
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8868
gene: RAP1A
product: RAP1A, member of RAS oncogene family, transcript variant X2
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_035561650.2
SIO_010081: RAP1A
subclass of: SO_0000673
so part of: RAP1A
location: complement(join(1203260..1205212,1207395..1207510,1210726..1210869,1215584..1215724,1216500..1216556,1218156..1221901,1225859..1225928,1241279..1241556))
location: region:1203260-1241556:-1
so has part: feature:1241279-1241556:-1:exon
so has part: feature:1225859-1225928:-1:exon
so has part: feature:1218156-1221901:-1:exon
so has part: feature:1216500-1216556:-1:exon
so has part: feature:1215584-1215724:-1:exon
so has part: feature:1210726-1210869:-1:exon
so has part: feature:1207395-1207510:-1:exon
so has part: feature:1203260-1205212:-1:exon

position:1241556:-1
position: 1241556
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1241279-1241556:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1225859-1225928:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1218156-1221901:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1216500-1216556:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1215584-1215724:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1210726-1210869:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1207395-1207510:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1203260-1205212:-1:exon

RAP1A
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8868
gene: RAP1A
product: RAP1A, member of RAS oncogene family, transcript variant X5
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_035561659.2
SIO_010081: RAP1A
subclass of: SO_0000673
so part of: RAP1A
location: complement(join(1203260..1205212,1207395..1207510,1210726..1210869,1215584..1215724,1216500..1216556,1218156..1218224,1221818..1221901,1222575..1222714))
location: region:1203260-1222714:-1
so has part: feature:1222575-1222714:-1:exon
so has part: feature:1221818-1221901:-1:exon
so has part: feature:1218156-1218224:-1:exon
so has part: feature:1216500-1216556:-1:exon
so has part: feature:1215584-1215724:-1:exon
so has part: feature:1210726-1210869:-1:exon
so has part: feature:1207395-1207510:-1:exon
so has part: feature:1203260-1205212:-1:exon

position:1222714:-1
position: 1222714
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1222575-1222714:-1:exon

position:1222575:-1
position: 1222575
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1221818-1221901:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1218156-1218224:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1216500-1216556:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1215584-1215724:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1210726-1210869:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1207395-1207510:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1203260-1205212:-1:exon

RAP1A
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8868
gene: RAP1A
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: ras-related protein Rap-1A isoform X2
translation: MREYKLVVLGSGGVGKSALTVQFVQGIFVEKYDPTIEDSYRKQVEVDCQQCMLEILDTAGTEQFTAMRDLYMKNGQGFALVYSITAQSTFNDLQDLREQILRVKDTEDVPMILVGNKCDLEEERVVGKEQGQNLARQWCNCAFLESSAKSKINVNEIFYDLVRQINRKTPVEKKKPKKKSCLLL
SIO_010081: RAP1A
subclass of: SO_0000673
so part of: RAP1A
location: complement(join(1207424..1207510,1210726..1210869,1215584..1215724,1216500..1216556,1218156..1218224,1221818..1221874))
location: region:1207424-1221874:-1
so has part: feature:1221818-1221874:-1:exon
so has part: feature:1218156-1218224:-1:exon
so has part: feature:1216500-1216556:-1:exon
so has part: feature:1215584-1215724:-1:exon
so has part: feature:1210726-1210869:-1:exon
so has part: feature:1207424-1207510:-1:exon

XP_035417545.1
type: Protein
SIO_000068: ncbiprotein

position:1207424:-1
position: 1207424
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1221874:-1
position: 1221874
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1221818-1221874:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1218156-1218224:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1216500-1216556:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1215584-1215724:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1210726-1210869:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1207424-1207510:-1:exon

RAP1A
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8868
gene: RAP1A
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: ras-related protein Rap-1A isoform X2
translation: MREYKLVVLGSGGVGKSALTVQFVQGIFVEKYDPTIEDSYRKQVEVDCQQCMLEILDTAGTEQFTAMRDLYMKNGQGFALVYSITAQSTFNDLQDLREQILRVKDTEDVPMILVGNKCDLEEERVVGKEQGQNLARQWCNCAFLESSAKSKINVNEIFYDLVRQINRKTPVEKKKPKKKSCLLL
SIO_010081: RAP1A
subclass of: SO_0000673
so part of: RAP1A
location: complement(join(1207424..1207510,1210726..1210869,1215584..1215724,1216500..1216556,1218156..1218224,1221818..1221874))
location: region:1207424-1221874:-1
so has part: feature:1221818-1221874:-1:exon
so has part: feature:1218156-1218224:-1:exon
so has part: feature:1216500-1216556:-1:exon
so has part: feature:1215584-1215724:-1:exon
so has part: feature:1210726-1210869:-1:exon
so has part: feature:1207424-1207510:-1:exon

XP_035417546.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1221818-1221874:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1218156-1218224:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1216500-1216556:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1215584-1215724:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1210726-1210869:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1207424-1207510:-1:exon

RAP1A
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8868
gene: RAP1A
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: ras-related protein Rap-1A isoform X2
translation: MREYKLVVLGSGGVGKSALTVQFVQGIFVEKYDPTIEDSYRKQVEVDCQQCMLEILDTAGTEQFTAMRDLYMKNGQGFALVYSITAQSTFNDLQDLREQILRVKDTEDVPMILVGNKCDLEEERVVGKEQGQNLARQWCNCAFLESSAKSKINVNEIFYDLVRQINRKTPVEKKKPKKKSCLLL
SIO_010081: RAP1A
subclass of: SO_0000673
so part of: RAP1A
location: complement(join(1207424..1207510,1210726..1210869,1215584..1215724,1216500..1216556,1218156..1218224,1221818..1221874))
location: region:1207424-1221874:-1
so has part: feature:1221818-1221874:-1:exon
so has part: feature:1218156-1218224:-1:exon
so has part: feature:1216500-1216556:-1:exon
so has part: feature:1215584-1215724:-1:exon
so has part: feature:1210726-1210869:-1:exon
so has part: feature:1207424-1207510:-1:exon

XP_035417548.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1221818-1221874:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1218156-1218224:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1216500-1216556:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1215584-1215724:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1210726-1210869:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1207424-1207510:-1:exon

RAP1A
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8868
gene: RAP1A
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: ras-related protein Rap-1A isoform X2
translation: MREYKLVVLGSGGVGKSALTVQFVQGIFVEKYDPTIEDSYRKQVEVDCQQCMLEILDTAGTEQFTAMRDLYMKNGQGFALVYSITAQSTFNDLQDLREQILRVKDTEDVPMILVGNKCDLEEERVVGKEQGQNLARQWCNCAFLESSAKSKINVNEIFYDLVRQINRKTPVEKKKPKKKSCLLL
SIO_010081: RAP1A
subclass of: SO_0000673
so part of: RAP1A
location: complement(join(1207424..1207510,1210726..1210869,1215584..1215724,1216500..1216556,1218156..1218224,1221818..1221874))
location: region:1207424-1221874:-1
so has part: feature:1221818-1221874:-1:exon
so has part: feature:1218156-1218224:-1:exon
so has part: feature:1216500-1216556:-1:exon
so has part: feature:1215584-1215724:-1:exon
so has part: feature:1210726-1210869:-1:exon
so has part: feature:1207424-1207510:-1:exon

XP_035417552.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1221818-1221874:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1218156-1218224:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1216500-1216556:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1215584-1215724:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1210726-1210869:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1207424-1207510:-1:exon

RAP1A
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8868
gene: RAP1A
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: ras-related protein Rap-1A isoform X2
translation: MREYKLVVLGSGGVGKSALTVQFVQGIFVEKYDPTIEDSYRKQVEVDCQQCMLEILDTAGTEQFTAMRDLYMKNGQGFALVYSITAQSTFNDLQDLREQILRVKDTEDVPMILVGNKCDLEEERVVGKEQGQNLARQWCNCAFLESSAKSKINVNEIFYDLVRQINRKTPVEKKKPKKKSCLLL
SIO_010081: RAP1A
subclass of: SO_0000673
so part of: RAP1A
location: complement(join(1207424..1207510,1210726..1210869,1215584..1215724,1216500..1216556,1218156..1218224,1221818..1221874))
location: region:1207424-1221874:-1
so has part: feature:1221818-1221874:-1:exon
so has part: feature:1218156-1218224:-1:exon
so has part: feature:1216500-1216556:-1:exon
so has part: feature:1215584-1215724:-1:exon
so has part: feature:1210726-1210869:-1:exon
so has part: feature:1207424-1207510:-1:exon

XP_050571363.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1221818-1221874:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1218156-1218224:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1216500-1216556:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1215584-1215724:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1210726-1210869:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1207424-1207510:-1:exon

RAP1A
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8868
gene: RAP1A
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: ras-related protein Rap-1A isoform X1
translation: MCVFFSSPHLKFISSVECFFCFNCSESVSWLLSQLLHFFFLSPQTVQFVQGIFVEKYDPTIEDSYRKQVEVDCQQCMLEILDTAGTEQFTAMRDLYMKNGQGFALVYSITAQSTFNDLQDLREQILRVKDTEDVPMILVGNKCDLEEERVVGKEQGQNLARQWCNCAFLESSAKSKINVNEIFYDLVRQINRKTPVEKKKPKKKSCLLL
SIO_010081: RAP1A
subclass of: SO_0000673
so part of: RAP1A
location: complement(join(1207424..1207510,1210726..1210869,1215584..1215724,1216500..1216556,1218156..1218356))
location: region:1207424-1218356:-1
so has part: feature:1218156-1218356:-1:exon
so has part: feature:1216500-1216556:-1:exon
so has part: feature:1215584-1215724:-1:exon
so has part: feature:1210726-1210869:-1:exon
so has part: feature:1207424-1207510:-1:exon

XP_035417541.1
type: Protein
SIO_000068: ncbiprotein

position:1218356:-1
position: 1218356
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1218156-1218356:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1216500-1216556:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1215584-1215724:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1210726-1210869:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1207424-1207510:-1:exon

RAP1A
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8868
gene: RAP1A
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: ras-related protein Rap-1A isoform X1
translation: MCVFFSSPHLKFISSVECFFCFNCSESVSWLLSQLLHFFFLSPQTVQFVQGIFVEKYDPTIEDSYRKQVEVDCQQCMLEILDTAGTEQFTAMRDLYMKNGQGFALVYSITAQSTFNDLQDLREQILRVKDTEDVPMILVGNKCDLEEERVVGKEQGQNLARQWCNCAFLESSAKSKINVNEIFYDLVRQINRKTPVEKKKPKKKSCLLL
SIO_010081: RAP1A
subclass of: SO_0000673
so part of: RAP1A
location: complement(join(1207424..1207510,1210726..1210869,1215584..1215724,1216500..1216556,1218156..1218356))
location: region:1207424-1218356:-1
so has part: feature:1218156-1218356:-1:exon
so has part: feature:1216500-1216556:-1:exon
so has part: feature:1215584-1215724:-1:exon
so has part: feature:1210726-1210869:-1:exon
so has part: feature:1207424-1207510:-1:exon

XP_035417543.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1218156-1218356:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1216500-1216556:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1215584-1215724:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1210726-1210869:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1207424-1207510:-1:exon

LOC118255267
type: Gene
subclass of: SO_0000704
RO_0002162: 8868
gene: LOC118255267
note: adenosine receptor A3-like; Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1263439..1264987)
location: region:1263439-1264987:-1
so has part: feature:1263439-1264987:-1:exon
subclass of: SO_0000010

118255267
type: Gene
SIO_000068: ncbigene

position:1263439:-1
position: 1263439
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1264987:-1
position: 1264987
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1263439-1264987:-1:exon

LOC118255267
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8868
gene: LOC118255267
product: adenosine receptor A3-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 17 Proteins
transcript id: XM_035561338.1
SIO_010081: LOC118255267
subclass of: SO_0000673
so part of: LOC118255267
location: complement(join(1263439..1264057,1264644..1264987))
location: region:1263439-1264987:-1
so has part: feature:1264644-1264987:-1:exon
so has part: feature:1263439-1264057:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1264644-1264987:-1:exon

position:1264644:-1
position: 1264644
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1263439-1264057:-1:exon

position:1264057:-1
position: 1264057
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC118255267
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8868
gene: LOC118255267
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: adenosine receptor A3-like
translation: MSTMSLDSLDVVYIVVEAVIGICAVVGNALVIWAVKLNPALQKTTFFYIISLALTDIAVAILVIPLAITVSLGVVIHFYSCLFMCCLLMIFPHPSILSLLAITIDRYLRVKLPTRYKATITKKGVCVILRLCWLVSVLVGLVPMLGWNQHAGDSGYIECHYLAVMRMDYVVYFSFFTWLLPPLLIMCTLYAKIFYIMWTKLSRNSASLPDGGTVYAKAYKTAKYMALLLFLFAVSWLPLGILNCISYFCLSCTIPRTLMYLSILLSHANSAMNPVVYAFKIQKFKETCTFILRTYILFQKSELVVSSAEHMTEQLGVSVI
SIO_010081: LOC118255267
subclass of: SO_0000673
so part of: LOC118255267
location: complement(join(1263439..1264057,1264644..1264987))
location: region:1263439-1264987:-1
so has part: feature:1264644-1264987:-1:exon
so has part: feature:1263439-1264057:-1:exon

XP_035417231.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1264644-1264987:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1263439-1264057:-1:exon

LOC118255268
type: Gene
subclass of: SO_0000704
RO_0002162: 8868
gene: LOC118255268
note: adenosine receptor A3-like; Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1267441..1269483
location: region:1267441-1269483:1
so has part: feature:1267441-1269483:1:exon
subclass of: SO_0000010

118255268
type: Gene
SIO_000068: ncbigene

position:1267441:1
position: 1267441
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1269483:1
position: 1269483
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1267441-1269483:1:exon

LOC118255268
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8868
gene: LOC118255268
product: adenosine receptor A3-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 21 Proteins
transcript id: XM_035561340.1
SIO_010081: LOC118255268
subclass of: SO_0000673
so part of: LOC118255268
location: join(1267441..1267841,1268874..1269483)
location: region:1267441-1269483:1
so has part: feature:1267441-1267841:1:exon
so has part: feature:1268874-1269483:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1267441-1267841:1:exon

position:1267841:1
position: 1267841
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1268874-1269483:1:exon

position:1268874:1
position: 1268874
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC118255268
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8868
gene: LOC118255268
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: adenosine receptor A3-like
translation: MSAFCSSSQDRSGPGDVPSNISQVLSSMDAIYIGAECLVALFAALGNILVIWVVKLNSAFQNTTMYFIVSLALADIAVGVLVIPLAIVVSLRVSIDFYSCLFMCCLIVIFTNASILSLLAIAVDRYLRVKLPIRYKIITTERRIWWALGLCWSLSLLAGLIPMFGWNKLKQKNTDSLTCEFVSVMRMDYMVYFGFVTWTLVPLTIMCALYVEIFYIIRMKLSQGANNVRGAGAFYGQEFKTAKSLALVLFLFAVSWLPLCIINCISYFYPECKIPKHWIYLGILLSHANSAMNPIVYACRINKFKTTYLLILRTYILCKKSPTTPDPVLTEQTTHQ
SIO_010081: LOC118255268
subclass of: SO_0000673
so part of: LOC118255268
location: join(1267441..1267841,1268874..1269483)
location: region:1267441-1269483:1
so has part: feature:1267441-1267841:1:exon
so has part: feature:1268874-1269483:1:exon

XP_035417233.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1267441-1267841:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1268874-1269483:1:exon

ATP5PB
type: Gene
subclass of: SO_0000704
RO_0002162: 8868
gene: ATP5PB
note: ATP synthase peripheral stalk-membrane subunit b; Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1277434..1281007)
location: region:1277434-1281007:-1
so has part: feature:1277434-1281007:-1:exon
subclass of: SO_0000010

118255341
type: Gene
SIO_000068: ncbigene

position:1277434:-1
position: 1277434
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1281007:-1
position: 1281007
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1277434-1281007:-1:exon

ATP5PB
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8868
gene: ATP5PB
product: ATP synthase peripheral stalk-membrane subunit b
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_035561444.2
SIO_010081: ATP5PB
subclass of: SO_0000673
so part of: ATP5PB
location: complement(join(1277434..1277597,1278220..1278399,1278620..1278745,1279160..1279323,1280290..1280435,1280726..1280768,1280866..1281007))
location: region:1277434-1281007:-1
so has part: feature:1280866-1281007:-1:exon
so has part: feature:1280726-1280768:-1:exon
so has part: feature:1280290-1280435:-1:exon
so has part: feature:1279160-1279323:-1:exon
so has part: feature:1278620-1278745:-1:exon
so has part: feature:1278220-1278399:-1:exon
so has part: feature:1277434-1277597:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1280866-1281007:-1:exon

position:1280866:-1
position: 1280866
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1280726-1280768:-1:exon

position:1280726:-1
position: 1280726
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1280768:-1
position: 1280768
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1280290-1280435:-1:exon

position:1280290:-1
position: 1280290
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1280435:-1
position: 1280435
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1279160-1279323:-1:exon

position:1279160:-1
position: 1279160
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1279323:-1
position: 1279323
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1278620-1278745:-1:exon

position:1278620:-1
position: 1278620
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1278745:-1
position: 1278745
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1278220-1278399:-1:exon

position:1278220:-1
position: 1278220
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1278399:-1
position: 1278399
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1277434-1277597:-1:exon

position:1277597:-1
position: 1277597
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

ATP5PB
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8868
gene: ATP5PB
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: ATP synthase F(0) complex subunit B1, mitochondrial
translation: MLSRLVLSAAPALLRSLRPAASVGVLHVARPIHTSQQHLAPLPPLPEKGGEVRHGLIPEEFFQFLYPKTGVTGPYMLGTGLLLYFLSKEIYVVNHETVAAACILSVIIYGIKKYGADVAAFADRLNEEKIAKALAVKNDAIRDLETAIEQEKKEQWRAEGRSYLFDAKRNNIAMLLEANYRERLLTVYNEVKKRLDYQVAMQNLKYQKEQDHMIQWVEKNVVQSITPQQQKESIAKCISDLKALSKSAQVAV
SIO_010081: ATP5PB
subclass of: SO_0000673
so part of: ATP5PB
location: complement(join(1277526..1277597,1278220..1278399,1278620..1278745,1279160..1279323,1280290..1280435,1280726..1280768,1280866..1280893))
location: region:1277526-1280893:-1
so has part: feature:1280866-1280893:-1:exon
so has part: feature:1280726-1280768:-1:exon
so has part: feature:1280290-1280435:-1:exon
so has part: feature:1279160-1279323:-1:exon
so has part: feature:1278620-1278745:-1:exon
so has part: feature:1278220-1278399:-1:exon
so has part: feature:1277526-1277597:-1:exon

XP_035417337.1
type: Protein
SIO_000068: ncbiprotein

position:1277526:-1
position: 1277526
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1280893:-1
position: 1280893
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1280866-1280893:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1280726-1280768:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1280290-1280435:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1279160-1279323:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1278620-1278745:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1278220-1278399:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1277526-1277597:-1:exon

WDR77
type: Gene
subclass of: SO_0000704
RO_0002162: 8868
gene: WDR77
note: WD repeat domain 77; Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1281027..1285661
location: region:1281027-1285661:1
so has part: feature:1281027-1285661:1:exon
subclass of: SO_0000010

118255422
type: Gene
SIO_000068: ncbigene

position:1281027:1
position: 1281027
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1285661:1
position: 1285661
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1281027-1285661:1:exon

WDR77
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8868
gene: WDR77
product: WD repeat domain 77
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_035561596.2
SIO_010081: WDR77
subclass of: SO_0000673
so part of: WDR77
location: join(1281027..1281251,1281334..1281519,1281643..1281784,1281865..1281914,1282575..1282645,1283012..1283066,1283335..1283406,1283503..1283611,1284055..1284123,1284329..1285661)
location: region:1281027-1285661:1
so has part: feature:1281027-1281251:1:exon
so has part: feature:1281334-1281519:1:exon
so has part: feature:1281643-1281784:1:exon
so has part: feature:1281865-1281914:1:exon
so has part: feature:1282575-1282645:1:exon
so has part: feature:1283012-1283066:1:exon
so has part: feature:1283335-1283406:1:exon
so has part: feature:1283503-1283611:1:exon
so has part: feature:1284055-1284123:1:exon
so has part: feature:1284329-1285661:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1281027-1281251:1:exon

position:1281251:1
position: 1281251
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1281334-1281519:1:exon

position:1281334:1
position: 1281334
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1281519:1
position: 1281519
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1281643-1281784:1:exon

position:1281643:1
position: 1281643
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1281784:1
position: 1281784
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1281865-1281914:1:exon

position:1281865:1
position: 1281865
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1281914:1
position: 1281914
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1282575-1282645:1:exon

position:1282575:1
position: 1282575
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1282645:1
position: 1282645
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1283012-1283066:1:exon

position:1283012:1
position: 1283012
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1283066:1
position: 1283066
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1283335-1283406:1:exon

position:1283335:1
position: 1283335
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1283406:1
position: 1283406
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1283503-1283611:1:exon

position:1283503:1
position: 1283503
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1283611:1
position: 1283611
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:1284055-1284123:1:exon

position:1284055:1
position: 1284055
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1284123:1
position: 1284123
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:1284329-1285661:1:exon

position:1284329:1
position: 1284329
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

WDR77
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8868
gene: WDR77
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: methylosome protein 50
translation: MAEPEPGPGPERGPAGQGPPPEPPAGGEQQQQQEEAAGPEWNIPPNAPACMERHLEGAHYRADGALLLGASGLSGRCWAGSLWVFADPRRAPSEGFCTAGVQTEAGVADLRWVADRGILVASDSGAVELWELDENETLIVNKFCKYEHDDIVTTVAVLAGSTQVVSGGQDFCVKVWDLPQQAVLRSYRAHSDAVTCVASCPGKDTVFLSCAEDGRTLLWDTRCPKPATRIVCSACNYLPTSVLWHPQKSDIFALGDENGTVALVDTKNPDSALSSTVHARRITGFAFSTHSSPLLASISEDCSVAVLDSDLSEVFRNRSHQDFVKGLSWSPSDNALLTTVGWDHQVLHHTVPIPTGEASGVNCVKE
SIO_010081: WDR77
subclass of: SO_0000673
so part of: WDR77
location: join(1281065..1281251,1281334..1281519,1281643..1281784,1281865..1281914,1282575..1282645,1283012..1283066,1283335..1283406,1283503..1283611,1284055..1284123,1284329..1284488)
location: region:1281065-1284488:1
so has part: feature:1281065-1281251:1:exon
so has part: feature:1281334-1281519:1:exon
so has part: feature:1281643-1281784:1:exon
so has part: feature:1281865-1281914:1:exon
so has part: feature:1282575-1282645:1:exon
so has part: feature:1283012-1283066:1:exon
so has part: feature:1283335-1283406:1:exon
so has part: feature:1283503-1283611:1:exon
so has part: feature:1284055-1284123:1:exon
so has part: feature:1284329-1284488:1:exon

XP_035417489.1
type: Protein
SIO_000068: ncbiprotein

position:1281065:1
position: 1281065
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1284488:1
position: 1284488
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1281065-1281251:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1281334-1281519:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1281643-1281784:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1281865-1281914:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1282575-1282645:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1283012-1283066:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1283335-1283406:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1283503-1283611:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1284055-1284123:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1284329-1284488:1:exon

C24H6orf132
type: Gene
subclass of: SO_0000704
RO_0002162: 8868
gene: C24H6orf132
note: chromosome 24 C6orf132 homolog; Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1290859..1304693)
location: region:1290859-1304693:-1
so has part: feature:1290859-1304693:-1:exon
subclass of: SO_0000010

118255437
type: Gene
SIO_000068: ncbigene

position:1290859:-1
position: 1290859
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1304693:-1
position: 1304693
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1290859-1304693:-1:exon

C24H6orf132
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8868
gene: C24H6orf132
product: chromosome 24 C6orf132 homolog
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein
transcript id: XM_035561617.1
SIO_010081: C24H6orf132
subclass of: SO_0000673
so part of: C24H6orf132
location: complement(join(1290859..1290964,1291428..1294179,1294531..1294606,1299888..1300003,1304546..1304693))
location: region:1290859-1304693:-1
so has part: feature:1304546-1304693:-1:exon
so has part: feature:1299888-1300003:-1:exon
so has part: feature:1294531-1294606:-1:exon
so has part: feature:1291428-1294179:-1:exon
so has part: feature:1290859-1290964:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1304546-1304693:-1:exon

position:1304546:-1
position: 1304546
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1299888-1300003:-1:exon

position:1299888:-1
position: 1299888
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1300003:-1
position: 1300003
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1294531-1294606:-1:exon

position:1294531:-1
position: 1294531
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1294606:-1
position: 1294606
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1291428-1294179:-1:exon

position:1291428:-1
position: 1291428
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1294179:-1
position: 1294179
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1290859-1290964:-1:exon

position:1290964:-1
position: 1290964
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

C24H6orf132
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8868
gene: C24H6orf132
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: uncharacterized protein C6orf132 homolog
translation: MKKHHSVQGTFSRLFGKRHGAAAATTSLFATNPPWIFTQEVTSDSAGGTGDVIEVYYGDNRFGTMTDSGTATLKPRPRVRPMLTFLPLNAQESHGVAVPTPSVPEDFEEKAALGPGSQINGNYRMYSSVGDLRPQALDGDELDEDIPPPPSVPPPPPPTAWAPTPPPPASPALQPPEMRPPSPPLPPPETVPPPPAMAPPPPPASTLSSPGTLAPPDFIPPAPPLSKAPVLFTNGISKWKSETVLNTRQADAEGPLHTTEAQVPAAPSPKESLQPPKQCPEPHLTFPRSFKVPPPAPARSSSIPVQENQPTHQEPFTRQTHARPPLPPCFTIRPAAKAHVGEAKERNPPLRQPITKLAVPAPPPLSPKPGPGIVGRSPLPSSESEKSPQPKTTNKDSPLKPEVLTANDLELPPPDYPTSEDSWKDAGNLSRLQHELSALLHSPRREERQPEVPAAPRPADGSTNHAGNHVPGPNGSQLTGPPRKASPLPTGGETERKEGPGSPPSEAQPAPESNPAVQTHSVMKIRNELEAVFSLKKERKPALGLTGQKQGPENGSSTPRLRPSPSDPGDAVLPKPAPSLLPAPVVAAAVAEETTRQEEHPVPVTPAANKAMESSTTAPQSPDSSVSAPGPPQKPEEEPPAPAAPSPPISPAPHPGAAIFQYKVHRAGAGSAEPPCPTNSSGSSPGASGPGEEEVLIHPVTGERVERGSPMALLLAARQRAQRGRPGSEVGGPPRAKPPPKLGSAASDTTSTTSFYRHESRPYSFTVVPRPLSGTGQSKLPSFSSSSEQGWVAGEGQPPGHQRATASSLLRGLLESGQPKRPEPPSSAMPREDEEEEKNGEMTLDYAIIPPPPEFSNEADEADRIPQSQEGNRKCPSFPDCSRGSEAPRYFRWPGYGRGYNYGNRQDPLEQSRRNSDLTPHYPDYSGSAGYFGRGPNSRPLIKKRLYVSEPERSYPRAAARGAGALSSYGPGAYSSSAGEGARRLGSAHRNGPASTQGRRTSIDSAGKAGPYSSADTKYKAQNGDFSAAGRPAHGSSQYSGPTNTFTVRPGTRQPISYAYQSGHR
SIO_010081: C24H6orf132
subclass of: SO_0000673
so part of: C24H6orf132
location: complement(join(1290859..1290964,1291428..1294179,1294531..1294606,1299888..1300003,1304546..1304693))
location: region:1290859-1304693:-1
so has part: feature:1304546-1304693:-1:exon
so has part: feature:1299888-1300003:-1:exon
so has part: feature:1294531-1294606:-1:exon
so has part: feature:1291428-1294179:-1:exon
so has part: feature:1290859-1290964:-1:exon

XP_035417510.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1304546-1304693:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1299888-1300003:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1294531-1294606:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1291428-1294179:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1290859-1290964:-1:exon

GUCA1ANB
type: Gene
subclass of: SO_0000704
RO_0002162: 8868
gene: GUCA1ANB
note: GUCA1A neighbor; Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1310342..1310719
location: region:1310342-1310719:1
so has part: feature:1310342-1310719:1:exon
subclass of: SO_0000010

118255269
type: Gene
SIO_000068: ncbigene

position:1310342:1
position: 1310342
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1310719:1
position: 1310719
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1310342-1310719:1:exon

GUCA1ANB
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8868
gene: GUCA1ANB
product: GUCA1A neighbor
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins
transcript id: XM_035561341.2
SIO_010081: GUCA1ANB
subclass of: SO_0000673
so part of: GUCA1ANB
location: 1310342..1310719
location: region:1310342-1310719:1
so has part: feature:1310342-1310719:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1310342-1310719:1:exon

GUCA1ANB
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8868
gene: GUCA1ANB
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: putative uncharacterized protein GUCA1ANB
translation: MTKKQAAPGKDHKRPEEMEKTKATQDACGTPSPPKRQLSPAHHRKDQPLASRFVPFVAHFGGREPDSFKFLFYTPSCSNSYWPFYTMQQPTCGYLYRHDTDHTRKVIDVPSANIVKWRPVLNTKP
SIO_010081: GUCA1ANB
subclass of: SO_0000673
so part of: GUCA1ANB
location: 1310342..1310719
location: region:1310342-1310719:1
so has part: feature:1310342-1310719:1:exon

XP_035417234.2
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1310342-1310719:1:exon

GUCA1A
type: Gene
subclass of: SO_0000704
RO_0002162: 8868
gene: GUCA1A
note: guanylate cyclase activator 1A; Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1312812..1316155
location: region:1312812-1316155:1
so has part: feature:1312812-1316155:1:exon
subclass of: SO_0000010

118255419
type: Gene
SIO_000068: ncbigene

position:1312812:1
position: 1312812
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1316155:1
position: 1316155
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1312812-1316155:1:exon

GUCA1A
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8868
gene: GUCA1A
product: guanylate cyclase activator 1A
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 8 Proteins
transcript id: XM_035561594.1
SIO_010081: GUCA1A
subclass of: SO_0000673
so part of: GUCA1A
location: join(1312812..1313009,1314809..1314958,1315533..1315623,1315995..1316155)
location: region:1312812-1316155:1
so has part: feature:1312812-1313009:1:exon
so has part: feature:1314809-1314958:1:exon
so has part: feature:1315533-1315623:1:exon
so has part: feature:1315995-1316155:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1312812-1313009:1:exon

position:1313009:1
position: 1313009
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1314809-1314958:1:exon

position:1314809:1
position: 1314809
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1314958:1
position: 1314958
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1315533-1315623:1:exon

position:1315533:1
position: 1315533
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1315623:1
position: 1315623
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1315995-1316155:1:exon

position:1315995:1
position: 1315995
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

GUCA1A
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8868
gene: GUCA1A
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: guanylyl cyclase-activating protein 1
translation: MGNMDGKAVEELSATECHQWYKKFMTECPSGQLTLYEFKQFFGLKNLSPSANKYVEQMFETFDFNKDGYIDFMEYVAALSLVLKGKVDQKLRWYFKLYDVDGNGCIDRGELLNIIKAIRAINRCNDTMTAEEFTNMVFDKIDINGDGELSLEEFMEGVQKDEVLLDILTRSLDLTHIVKLIQNDGKNPHASEEAEEDAQ
SIO_010081: GUCA1A
subclass of: SO_0000673
so part of: GUCA1A
location: join(1312812..1313009,1314809..1314958,1315533..1315623,1315995..1316155)
location: region:1312812-1316155:1
so has part: feature:1312812-1313009:1:exon
so has part: feature:1314809-1314958:1:exon
so has part: feature:1315533-1315623:1:exon
so has part: feature:1315995-1316155:1:exon

XP_035417487.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1312812-1313009:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1314809-1314958:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1315533-1315623:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1315995-1316155:1:exon

GUCA1B
type: Gene
subclass of: SO_0000704
RO_0002162: 8868
gene: GUCA1B
note: guanylate cyclase activator 1B; Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1322059..1325470)
location: region:1322059-1325470:-1
so has part: feature:1322059-1325470:-1:exon
subclass of: SO_0000010

118255404
type: Gene
SIO_000068: ncbigene

position:1322059:-1
position: 1322059
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1325470:-1
position: 1325470
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1322059-1325470:-1:exon

GUCA1B
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8868
gene: GUCA1B
product: guanylate cyclase activator 1B
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 11 Proteins
transcript id: XM_035561573.1
SIO_010081: GUCA1B
subclass of: SO_0000673
so part of: GUCA1B
location: complement(join(1322059..1322186,1322819..1322933,1324267..1324416,1325267..1325470))
location: region:1322059-1325470:-1
so has part: feature:1325267-1325470:-1:exon
so has part: feature:1324267-1324416:-1:exon
so has part: feature:1322819-1322933:-1:exon
so has part: feature:1322059-1322186:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1325267-1325470:-1:exon

position:1325267:-1
position: 1325267
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1324267-1324416:-1:exon

position:1324267:-1
position: 1324267
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1324416:-1
position: 1324416
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1322819-1322933:-1:exon

position:1322819:-1
position: 1322819
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1322933:-1
position: 1322933
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1322059-1322186:-1:exon

position:1322186:-1
position: 1322186
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

GUCA1B
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8868
gene: GUCA1B
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: guanylyl cyclase-activating protein 2
translation: MGQQFTNAEGEQAEIDVAELQEWYKKFVVECPSGTLFMHEFKRFFGVQDNREAAEYIENMFRAFDKNGDNTIDFLEYVAALNLVLRGKLEHKLRWTFKVYDKDGNGCIDKPELLEIVESIYKLKKVCRSEVEERTPLLTPEEVVDRIFQLVDENGDGQLSLDEFIDGARKDKWVMKMLQMDVNPGGWISEQRRKSALF
SIO_010081: GUCA1B
subclass of: SO_0000673
so part of: GUCA1B
location: complement(join(1322059..1322186,1322819..1322933,1324267..1324416,1325267..1325470))
location: region:1322059-1325470:-1
so has part: feature:1325267-1325470:-1:exon
so has part: feature:1324267-1324416:-1:exon
so has part: feature:1322819-1322933:-1:exon
so has part: feature:1322059-1322186:-1:exon

XP_035417466.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1325267-1325470:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1324267-1324416:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1322819-1322933:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1322059-1322186:-1:exon

IRF6
type: Gene
subclass of: SO_0000704
RO_0002162: 8868
gene: IRF6
note: interferon regulatory factor 6; Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1333217..1337239
location: region:1333217-1337239:1
so has part: feature:1333217-1337239:1:exon
subclass of: SO_0000010

118255395
type: Gene
SIO_000068: ncbigene

position:1333217:1
position: 1333217
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1337239:1
position: 1337239
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1333217-1337239:1:exon

IRF6
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8868
gene: IRF6
product: interferon regulatory factor 6
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 13 Proteins
transcript id: XM_035561559.1
SIO_010081: IRF6
subclass of: SO_0000673
so part of: IRF6
location: join(1333217..1333390,1334507..1334711,1335157..1335279,1335385..1335531,1335837..1336229,1336618..1336736,1337018..1337239)
location: region:1333217-1337239:1
so has part: feature:1333217-1333390:1:exon
so has part: feature:1334507-1334711:1:exon
so has part: feature:1335157-1335279:1:exon
so has part: feature:1335385-1335531:1:exon
so has part: feature:1335837-1336229:1:exon
so has part: feature:1336618-1336736:1:exon
so has part: feature:1337018-1337239:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1333217-1333390:1:exon

position:1333390:1
position: 1333390
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1334507-1334711:1:exon

position:1334507:1
position: 1334507
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1334711:1
position: 1334711
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1335157-1335279:1:exon

position:1335157:1
position: 1335157
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1335279:1
position: 1335279
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1335385-1335531:1:exon

position:1335385:1
position: 1335385
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1335531:1
position: 1335531
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1335837-1336229:1:exon

position:1335837:1
position: 1335837
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1336229:1
position: 1336229
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1336618-1336736:1:exon

position:1336618:1
position: 1336618
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1336736:1
position: 1336736
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1337018-1337239:1:exon

position:1337018:1
position: 1337018
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

IRF6
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8868
gene: IRF6
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: interferon regulatory factor 6
translation: MALHPRRVRLKPWLVAQVDSGMYPGLIWLNREAKRFQIPWKHATRHSPQHEEENTIFKAWAVETGKYQEGVDEPDPAKWKAQLRCALNKSREFNLMYDGTKEVPMNPVKIYEVCDIPQSQGSIINPGSTGSAPWDEKDNDLDEEEEEELNQSQHVPIQETFPFLNINDSPMAPASAENCSPEAVWPKNEPLDMEMPPTALQHDFFSSPELWISSLPMTDLEIKFEYRGKETGATTTVSNPQGCRLFYGELGPMPDQEELFGPINLEQVKFPGTEQITNERQKIFTSRLLDVMDRGLILEVSGHAIYAVRLCQCKVYWSGPCAPSAATPNLIERQKKVKLFCLETFLSELIAHQKGQIEKQPPYEIYFCFGEEWPDGKPRERKLIVVQVIPVVARMIYEMFSGDFTRSFDSGSVRLQISTPDIKDNIVAHLKQLYRLLQTHQEGWPMQAPAMHMAQPLPAQ
SIO_010081: IRF6
subclass of: SO_0000673
so part of: IRF6
location: join(1333217..1333390,1334507..1334711,1335157..1335279,1335385..1335531,1335837..1336229,1336618..1336736,1337018..1337239)
location: region:1333217-1337239:1
so has part: feature:1333217-1333390:1:exon
so has part: feature:1334507-1334711:1:exon
so has part: feature:1335157-1335279:1:exon
so has part: feature:1335385-1335531:1:exon
so has part: feature:1335837-1336229:1:exon
so has part: feature:1336618-1336736:1:exon
so has part: feature:1337018-1337239:1:exon

XP_035417452.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1333217-1333390:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1334507-1334711:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1335157-1335279:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1335385-1335531:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1335837-1336229:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1336618-1336736:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1337018-1337239:1:exon

C24H1orf74
type: Gene
subclass of: SO_0000704
RO_0002162: 8868
gene: C24H1orf74
note: chromosome 24 C1orf74 homolog; Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1337863..1339049
location: region:1337863-1339049:1
so has part: feature:1337863-1339049:1:exon
subclass of: SO_0000010

118255391
type: Gene
SIO_000068: ncbigene

position:1337863:1
position: 1337863
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1339049:1
position: 1339049
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1337863-1339049:1:exon

C24H1orf74
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8868
gene: C24H1orf74
product: chromosome 24 C1orf74 homolog
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_035561554.2
SIO_010081: C24H1orf74
subclass of: SO_0000673
so part of: C24H1orf74
location: 1337863..1339049
location: region:1337863-1339049:1
so has part: feature:1337863-1339049:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1337863-1339049:1:exon

C24H1orf74
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8868
gene: C24H1orf74
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: UPF0739 protein C1orf74 homolog
translation: MEPVEPLPAPQLVAAAREALGAGTGRRRRRLPASRALQLAGEVLAVAAGLKPALLYDCGAAGPAELRRYLARLREAGLAPRRLHLLGAGGSALLLHPGSARRRLEAALRSRPGPFVDVAAARGSPALCGPAQAQAIRGHLAALLAHLEAAEEAAAGPVSCSEVVPAGWNLCTVFGVLLGYPAAYHFPVEEGSENCLALTPLRVFAVWARCPRIQGGLAVQIYSFSIPESLREELREVLDAWCDDLRDNFCAQSDFVDLCISSEVVSLPAVAL
SIO_010081: C24H1orf74
subclass of: SO_0000673
so part of: C24H1orf74
location: 1337931..1338749
location: region:1337931-1338749:1
so has part: feature:1337931-1338749:1:exon

XP_035417447.1
type: Protein
SIO_000068: ncbiprotein

position:1337931:1
position: 1337931
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1338749:1
position: 1338749
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1337931-1338749:1:exon

TRAF3IP3
type: Gene
subclass of: SO_0000704
RO_0002162: 8868
gene: TRAF3IP3
note: TRAF3 interacting protein 3; Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1339791..1352826)
location: region:1339791-1352826:-1
so has part: feature:1339791-1352826:-1:exon
subclass of: SO_0000010

118255392
type: Gene
SIO_000068: ncbigene

position:1339791:-1
position: 1339791
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1352826:-1
position: 1352826
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1339791-1352826:-1:exon

TRAF3IP3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8868
gene: TRAF3IP3
product: TRAF3 interacting protein 3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins
transcript id: XM_035561556.1
SIO_010081: TRAF3IP3
subclass of: SO_0000673
so part of: TRAF3IP3
location: complement(join(1339791..1339874,1340066..1340341,1341451..1341599,1342128..1342187,1342267..1342350,1342736..1342871,1343045..1343182,1343761..1343901,1344169..1344240,1347754..1347849,1348074..1348103,1348459..1348483,1348696..1348747,1349219..1349363,1350459..1350713,1352748..1352826))
location: region:1339791-1352826:-1
so has part: feature:1352748-1352826:-1:exon
so has part: feature:1350459-1350713:-1:exon
so has part: feature:1349219-1349363:-1:exon
so has part: feature:1348696-1348747:-1:exon
so has part: feature:1348459-1348483:-1:exon
so has part: feature:1348074-1348103:-1:exon
so has part: feature:1347754-1347849:-1:exon
so has part: feature:1344169-1344240:-1:exon
so has part: feature:1343761-1343901:-1:exon
so has part: feature:1343045-1343182:-1:exon
so has part: feature:1342736-1342871:-1:exon
so has part: feature:1342267-1342350:-1:exon
so has part: feature:1342128-1342187:-1:exon
so has part: feature:1341451-1341599:-1:exon
so has part: feature:1340066-1340341:-1:exon
so has part: feature:1339791-1339874:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1352748-1352826:-1:exon

position:1352748:-1
position: 1352748
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1350459-1350713:-1:exon

position:1350459:-1
position: 1350459
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1350713:-1
position: 1350713
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1349219-1349363:-1:exon

position:1349219:-1
position: 1349219
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1349363:-1
position: 1349363
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1348696-1348747:-1:exon

position:1348696:-1
position: 1348696
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1348747:-1
position: 1348747
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1348459-1348483:-1:exon

position:1348459:-1
position: 1348459
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1348483:-1
position: 1348483
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1348074-1348103:-1:exon

position:1348074:-1
position: 1348074
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1348103:-1
position: 1348103
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1347754-1347849:-1:exon

position:1347754:-1
position: 1347754
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1347849:-1
position: 1347849
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1344169-1344240:-1:exon

position:1344169:-1
position: 1344169
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1344240:-1
position: 1344240
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:1343761-1343901:-1:exon

position:1343761:-1
position: 1343761
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1343901:-1
position: 1343901
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:1343045-1343182:-1:exon

position:1343045:-1
position: 1343045
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1343182:-1
position: 1343182
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:1342736-1342871:-1:exon

position:1342736:-1
position: 1342736
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1342871:-1
position: 1342871
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:1342267-1342350:-1:exon

position:1342267:-1
position: 1342267
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1342350:-1
position: 1342350
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:1342128-1342187:-1:exon

position:1342128:-1
position: 1342128
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1342187:-1
position: 1342187
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:1341451-1341599:-1:exon

position:1341451:-1
position: 1341451
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1341599:-1
position: 1341599
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:1340066-1340341:-1:exon

position:1340066:-1
position: 1340066
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1340341:-1
position: 1340341
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:1339791-1339874:-1:exon

position:1339874:-1
position: 1339874
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

TRAF3IP3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8868
gene: TRAF3IP3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: TRAF3-interacting JNK-activating modulator
translation: MISPPERARPRRAGESYEEKCERRHETREALRRRSHPPSCRRPGRAAEELPQSPRQREFLRRRNLPSTATLTQATLLFQRPWSHPAYPPVLSPLGLGSPLDVSAEATPGPRVFTNTQGTQTLTSTAVKDSSQQTDCGTAVLNKEIIQLSSYLKEALHRELLLKQKMVILQELLSTLLQASEKSWQGQLNEDKLKCKLRALENQLQACTQSYSKECVKKILIEMEDQKQTYEQKAKEALQKMLEDKLQAEQQLQNSQRCLEVTREDLALWKVHYTTLKAEWTQMTKTQSELESNLHVLQSKLQHTAAQNEQLQQALDRLQQEHAELQQRASALQEDNQLQAEHISTIEGKLQKEQNQKLTLQSQKLSLEATISHLHNLMQNQTNERKMQEAMVQRKDQVFTTQSPPLTPAKETQNALLKHPEEEAEESLKAEIQKRTSQLTAKENEVYVGTQVADVKIPHHQAARAQAKSQGCCGSPAGLGVPGPAGLAPANVPANVPLQCQELRAELEALSEEYRSCLTRLRQCRDELNHVQSKPAKRQRGNWLPLLLAVIAMAMAAFLANYRP
SIO_010081: TRAF3IP3
subclass of: SO_0000673
so part of: TRAF3IP3
location: complement(join(1339791..1339874,1340066..1340341,1341451..1341599,1342128..1342187,1342267..1342350,1342736..1342871,1343045..1343182,1343761..1343901,1344169..1344240,1347754..1347849,1348074..1348103,1348459..1348483,1348696..1348747,1349219..1349363,1350459..1350665))
location: region:1339791-1350665:-1
so has part: feature:1350459-1350665:-1:exon
so has part: feature:1349219-1349363:-1:exon
so has part: feature:1348696-1348747:-1:exon
so has part: feature:1348459-1348483:-1:exon
so has part: feature:1348074-1348103:-1:exon
so has part: feature:1347754-1347849:-1:exon
so has part: feature:1344169-1344240:-1:exon
so has part: feature:1343761-1343901:-1:exon
so has part: feature:1343045-1343182:-1:exon
so has part: feature:1342736-1342871:-1:exon
so has part: feature:1342267-1342350:-1:exon
so has part: feature:1342128-1342187:-1:exon
so has part: feature:1341451-1341599:-1:exon
so has part: feature:1340066-1340341:-1:exon
so has part: feature:1339791-1339874:-1:exon

XP_035417449.1
type: Protein
SIO_000068: ncbiprotein

position:1350665:-1
position: 1350665
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1350459-1350665:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1349219-1349363:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1348696-1348747:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1348459-1348483:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1348074-1348103:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1347754-1347849:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1344169-1344240:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1343761-1343901:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1343045-1343182:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1342736-1342871:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1342267-1342350:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1342128-1342187:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1341451-1341599:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1340066-1340341:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1339791-1339874:-1:exon

LOC118255270
type: Gene
subclass of: SO_0000704
RO_0002162: 8868
gene: LOC118255270
note: 11-beta-hydroxysteroid dehydrogenase 1-like; Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1354475..1357141)
location: region:1354475-1357141:-1
so has part: feature:1354475-1357141:-1:exon
subclass of: SO_0000010

118255270
type: Gene
SIO_000068: ncbigene

position:1354475:-1
position: 1354475
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1357141:-1
position: 1357141
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1354475-1357141:-1:exon

LOC118255270
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8868
gene: LOC118255270
product: 11-beta-hydroxysteroid dehydrogenase 1-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 7 Proteins
transcript id: XM_035561342.1
SIO_010081: LOC118255270
subclass of: SO_0000673
so part of: LOC118255270
location: complement(join(1354475..1354749,1355127..1355270,1355551..1355736,1355855..1355966,1356449..1356579,1357054..1357141))
location: region:1354475-1357141:-1
so has part: feature:1357054-1357141:-1:exon
so has part: feature:1356449-1356579:-1:exon
so has part: feature:1355855-1355966:-1:exon
so has part: feature:1355551-1355736:-1:exon
so has part: feature:1355127-1355270:-1:exon
so has part: feature:1354475-1354749:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1357054-1357141:-1:exon

position:1357054:-1
position: 1357054
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1356449-1356579:-1:exon

position:1356449:-1
position: 1356449
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1356579:-1
position: 1356579
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1355855-1355966:-1:exon

position:1355855:-1
position: 1355855
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1355966:-1
position: 1355966
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1355551-1355736:-1:exon

position:1355551:-1
position: 1355551
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1355736:-1
position: 1355736
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1355127-1355270:-1:exon

position:1355127:-1
position: 1355127
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1355270:-1
position: 1355270
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1354475-1354749:-1:exon

position:1354749:-1
position: 1354749
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC118255270
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8868
gene: LOC118255270
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: 11-beta-hydroxysteroid dehydrogenase 1-like
translation: MGLLLKVIIPLMGLGLAVYFYSAPENFSEEMLRGKRVIVTGASSGIGEQMAYHLARMGAHVLLTARTEAKLQKVVERCLELGAASARFVSGSMEDTAFAEEVVKEAENTWGGLDMLILNHIGYSYFNYFDGDVEHVRKLLETNFLSYVAMTVTALPMLKESEGSIVVVSSVAGKAGSPFVAPYSATKFALDGFFSSLRHEFIIDNVNVSITLCILGFIDTDSAMRVVSHAIRVAPSPKEECALEIIRSGALRQRELHYPPSTVTGMLLLRSLAPDLLDTLIRSNVIVENVRRAPPPHSTTVPPAGSPGSGR
SIO_010081: LOC118255270
subclass of: SO_0000673
so part of: LOC118255270
location: complement(join(1354475..1354749,1355127..1355270,1355551..1355736,1355855..1355966,1356449..1356579,1357054..1357141))
location: region:1354475-1357141:-1
so has part: feature:1357054-1357141:-1:exon
so has part: feature:1356449-1356579:-1:exon
so has part: feature:1355855-1355966:-1:exon
so has part: feature:1355551-1355736:-1:exon
so has part: feature:1355127-1355270:-1:exon
so has part: feature:1354475-1354749:-1:exon

XP_035417235.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1357054-1357141:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1356449-1356579:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1355855-1355966:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1355551-1355736:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1355127-1355270:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1354475-1354749:-1:exon

LOC118255421
type: Gene
subclass of: SO_0000704
RO_0002162: 8868
gene: LOC118255421
note: 11-beta-hydroxysteroid dehydrogenase 1-like; Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1358852..1363048)
location: region:1358852-1363048:-1
so has part: feature:1358852-1363048:-1:exon
subclass of: SO_0000010

118255421
type: Gene
SIO_000068: ncbigene

position:1358852:-1
position: 1358852
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1363048:-1
position: 1363048
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1358852-1363048:-1:exon

LOC118255421
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8868
gene: LOC118255421
product: 11-beta-hydroxysteroid dehydrogenase 1-like
exception: unclassified transcription discrepancy
note: The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: deleted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins
transcript id: XM_035561595.1
SIO_010081: LOC118255421
subclass of: SO_0000673
so part of: LOC118255421
location: complement(join(1358852..1359072,1359666..1359809,1360603..1360788,1361514..1361625,1362128..1362340,1362961..1363048))
location: region:1358852-1363048:-1
so has part: feature:1362961-1363048:-1:exon
so has part: feature:1362128-1362340:-1:exon
so has part: feature:1361514-1361625:-1:exon
so has part: feature:1360603-1360788:-1:exon
so has part: feature:1359666-1359809:-1:exon
so has part: feature:1358852-1359072:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1362961-1363048:-1:exon

position:1362961:-1
position: 1362961
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1362128-1362340:-1:exon

position:1362128:-1
position: 1362128
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1362340:-1
position: 1362340
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1361514-1361625:-1:exon

position:1361514:-1
position: 1361514
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1361625:-1
position: 1361625
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1360603-1360788:-1:exon

position:1360603:-1
position: 1360603
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1360788:-1
position: 1360788
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1359666-1359809:-1:exon

position:1359666:-1
position: 1359666
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1359809:-1
position: 1359809
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1358852-1359072:-1:exon

position:1359072:-1
position: 1359072
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC118255421
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8868
gene: LOC118255421
exception: unclassified translation discrepancy
note: The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: deleted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: LOW QUALITY PROTEIN: 11-beta-hydroxysteroid dehydrogenase 1-like
translation: MGRLQKILIPFLGLVLAFCFYSARENFKPEMLKGKRVIVTGASTGIGEQMAYHLARMGAHVLVTARTEAKLQKVNGKLSTHTCMLMACTHKRRKANLTSQVVERCRELGAGSARLISGSMEDMAFAKRVVEAAEAELGGLDMLILNHVGKSYFSYFDGNVRHVQKLLDINFLSYVAMTVSALPMLKQSGGSIVVVSSMAGKVGFPFTVPYSATKFALDGFFSSLRQEFRIQNVNVSITLCILSFIDTESAVRAAADVLLMSPAPKEECALEIIKGGALRQREVYYKYALTKIPLLLRDWAAELLDYLVRQHYQVERPPAA
SIO_010081: LOC118255421
subclass of: SO_0000673
so part of: LOC118255421
location: complement(join(1358852..1359072,1359666..1359809,1360603..1360788,1361514..1361625,1362128..1362340,1362961..1363048))
location: region:1358852-1363048:-1
so has part: feature:1362961-1363048:-1:exon
so has part: feature:1362128-1362340:-1:exon
so has part: feature:1361514-1361625:-1:exon
so has part: feature:1360603-1360788:-1:exon
so has part: feature:1359666-1359809:-1:exon
so has part: feature:1358852-1359072:-1:exon

XP_035417488.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1362961-1363048:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1362128-1362340:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1361514-1361625:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1360603-1360788:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1359666-1359809:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1358852-1359072:-1:exon

G0S2
type: Gene
subclass of: SO_0000704
RO_0002162: 8868
gene: G0S2
note: G0/G1 switch 2; Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1368874..1369926)
location: region:1368874-1369926:-1
so has part: feature:1368874-1369926:-1:exon
subclass of: SO_0000010

118255343
type: Gene
SIO_000068: ncbigene

position:1368874:-1
position: 1368874
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1369926:-1
position: 1369926
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1368874-1369926:-1:exon

G0S2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8868
gene: G0S2
product: G0/G1 switch 2
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_035561445.2
SIO_010081: G0S2
subclass of: SO_0000673
so part of: G0S2
location: complement(join(1368874..1369520,1369803..1369926))
location: region:1368874-1369926:-1
so has part: feature:1369803-1369926:-1:exon
so has part: feature:1368874-1369520:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1369803-1369926:-1:exon

position:1369803:-1
position: 1369803
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1368874-1369520:-1:exon

position:1369520:-1
position: 1369520
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

G0S2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8868
gene: G0S2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: G0/G1 switch protein 2
translation: METMHELIPFAKELLSQKPNRKMVKLYMLGSVLAFFGVVIGLVEAVCSPFTSEGRLEEEEEKKPTPTRGQMLPQKQEDLILEKSKKPVVMQRAQVTRQHAS
SIO_010081: G0S2
subclass of: SO_0000673
so part of: G0S2
location: complement(1369165..1369470)
location: region:1369165-1369470:-1
so has part: feature:1369165-1369470:-1:exon

XP_035417338.1
type: Protein
SIO_000068: ncbiprotein

position:1369165:-1
position: 1369165
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1369470:-1
position: 1369470
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1369165-1369470:-1:exon

LAMB3
type: Gene
subclass of: SO_0000704
RO_0002162: 8868
gene: LAMB3
note: laminin subunit beta 3; Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1378973..1403035
location: region:1378973-1403035:1
so has part: feature:1378973-1403035:1:exon
subclass of: SO_0000010

118255318
type: Gene
SIO_000068: ncbigene

position:1378973:1
position: 1378973
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1403035:1
position: 1403035
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1378973-1403035:1:exon

LAMB3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8868
gene: LAMB3
product: laminin subunit beta 3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins
transcript id: XM_035561417.1
SIO_010081: LAMB3
subclass of: SO_0000673
so part of: LAMB3
location: join(1378973..1379021,1379740..1379894,1388558..1388672,1388815..1388888,1389178..1389369,1389767..1389830,1390179..1390354,1391024..1391144,1391442..1391630,1391724..1391879,1392448..1392644,1394109..1394223,1394602..1394980,1395284..1395444,1396505..1396713,1397692..1397895,1398568..1398712,1400126..1400333,1401338..1401479,1401791..1401967,1402554..1402707,1402899..1403035)
location: region:1378973-1403035:1
so has part: feature:1378973-1379021:1:exon
so has part: feature:1379740-1379894:1:exon
so has part: feature:1388558-1388672:1:exon
so has part: feature:1388815-1388888:1:exon
so has part: feature:1389178-1389369:1:exon
so has part: feature:1389767-1389830:1:exon
so has part: feature:1390179-1390354:1:exon
so has part: feature:1391024-1391144:1:exon
so has part: feature:1391442-1391630:1:exon
so has part: feature:1391724-1391879:1:exon
so has part: feature:1392448-1392644:1:exon
so has part: feature:1394109-1394223:1:exon
so has part: feature:1394602-1394980:1:exon
so has part: feature:1395284-1395444:1:exon
so has part: feature:1396505-1396713:1:exon
so has part: feature:1397692-1397895:1:exon
so has part: feature:1398568-1398712:1:exon
so has part: feature:1400126-1400333:1:exon
so has part: feature:1401338-1401479:1:exon
so has part: feature:1401791-1401967:1:exon
so has part: feature:1402554-1402707:1:exon
so has part: feature:1402899-1403035:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1378973-1379021:1:exon

position:1379021:1
position: 1379021
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1379740-1379894:1:exon

position:1379740:1
position: 1379740
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1379894:1
position: 1379894
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1388558-1388672:1:exon

position:1388558:1
position: 1388558
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1388672:1
position: 1388672
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1388815-1388888:1:exon

position:1388815:1
position: 1388815
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1388888:1
position: 1388888
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1389178-1389369:1:exon

position:1389178:1
position: 1389178
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1389369:1
position: 1389369
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1389767-1389830:1:exon

position:1389767:1
position: 1389767
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1389830:1
position: 1389830
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1390179-1390354:1:exon

position:1390179:1
position: 1390179
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1390354:1
position: 1390354
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1391024-1391144:1:exon

position:1391024:1
position: 1391024
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1391144:1
position: 1391144
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:1391442-1391630:1:exon

position:1391442:1
position: 1391442
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1391630:1
position: 1391630
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:1391724-1391879:1:exon

position:1391724:1
position: 1391724
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1391879:1
position: 1391879
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:1392448-1392644:1:exon

position:1392448:1
position: 1392448
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1392644:1
position: 1392644
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:1394109-1394223:1:exon

position:1394109:1
position: 1394109
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1394223:1
position: 1394223
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:1394602-1394980:1:exon