Singulisphaera acidiphila DSM 18658 plasmid pSINAC03, complete sequence.
type: Entry
definition: Singulisphaera acidiphila DSM 18658 plasmid pSINAC03, complete sequence.
sequence version: NC_019895.1
sequence date: 2022-09-25
sequence: sequence
division: CON
label: NC_019895.1
type: RefSeq
SIO_000068: refseq
dblink: PRJNA224116
dblink: SAMN02232051
keyword: GSC:MIGS:2.1
keyword: RefSeq
source: Singulisphaera acidiphila DSM 18658
organism: Singulisphaera acidiphila DSM 18658
taxonomy: Bacteria; Planctomycetota; Planctomycetia; Isosphaerales; Isosphaeraceae; Singulisphaera.
reference: 1
reference: 2
comment: REFSEQ INFORMATION: The reference sequence is identical to\nCP003367.1.\nURL -- http://www.jgi.doe.gov\nJGI Project ID: 4089469\nSource DNA and organism available from Hans-Peter Klenk at the\nGerman Collection of Microorganisms and Cell Cultures (DSMZ)\n(hans-peter.klenk@dsmz.de)\nContacts: Jonathan A. Eisen (jaeisen@ucdavis.edu)\n David Bruce (microbe@cuba.jgi-psf.org)\nWhole genome sequencing and draft assembly at JGI-PGF\nFinishing done by JGI-LANL\nAnnotation by JGI-ORNL and JGI-PGF\nThe JGI and collaborators endorse the principles for the\ndistribution and use of large scale sequencing data adopted by the\nlarger genome sequencing community and urge users of this data to\nfollow them. It is our intention to publish the work of this\nproject in a timely fashion and we welcome collaborative\ninteraction on the project and analysis.\n(http://www.genome.gov/page.cfm?pageID=10506376).\nThe annotation was added by the NCBI Prokaryotic Genome Annotation\nPipeline (PGAP). Information about PGAP can be found here:\nhttps://www.ncbi.nlm.nih.gov/genome/annotation_prok/\n\n##MIGS-Data-START##\ninvestigation_type :: bacteria_archaea\nproject_name :: Singulisphaera acidiphila DSM 18658\ncollection_date :: 2008\nlat_lon :: 58.233 36.2\ndepth :: Missing\nalt_elev :: Missing\ncountry :: Russia\nenvironment :: Acidic wetlands\nnum_replicons :: 4\nref_biomaterial :: DSM 18658, ATCC BAA-1392, VKM B-2454\nbiotic_relationship :: Missing\ntrophic_level :: Missing\nrel_to_oxygen :: Microaerophilic\nisol_growth_condt :: 18450711\nsequencing_meth :: WGS\nassembly :: Newbler v. 2.3 (pre-release)\nfinishing_strategy :: Finished\nGOLD Stamp ID :: Gi05834\nType Strain :: Yes\nFunding Program :: DOE-GEBA 2009\nGene Calling Method :: Prodigal 1.4, GenePRIMP\nIsolation Site :: Sphagnum peat sampled from the bog\n Obukhovskoe (acidic wetland)\nCell Shape :: Sphere-shaped\nMotility :: Nonmotile\nTemperature Range :: Mesophile\nTemperature Optimum :: 20-26C\npH :: 5 - 6.2\n##MIGS-Data-END##\n\n#…

sequence
subclass of: SO_0000155
sequence length: 32131
topology: circular
so has quality: SO_0000988
location: 1..32131
location: region:1-32131:1
RO_0002162: 886293

NC_019895
type: RefSeq
SIO_000068: refseq

PRJNA224116
type: BioProject
SIO_000068: bioproject

SAMN02232051
type: BioSample
SIO_000068: biosample

1
title: Complete sequence of plasmid 3 of Singulisphaera acidiphila DSM 18658
author: Lucas, S.
author: Copeland, A.
author: Lapidus, A.
author: Glavina del Rio, T.
author: Dalin, E.
author: Tice, H.
author: Bruce, D.
author: Goodwin, L.
author: Pitluck, S.
author: Peters, L.
author: Ovchinnikova, G.
author: Chertkov, O.
author: Kyrpides, N.
author: Mavromatis, K.
author: Ivanova, N.
author: Brettin, T.
author: Detter, J.C.
author: Han, C.
author: Larimer, F.
author: Land, M.
author: Hauser, L.
author: Markowitz, V.
author: Cheng, J.-F.
author: Hugenholtz, P.
author: Woyke, T.
author: Wu, D.
author: Tindall, B.
author: Pomrenke, H.
author: Brambilla, E.
author: Klenk, H.-P.
author: Eisen, J.A.
journal: Unpublished

2
title: Direct Submission
author: Lucas, S.
author: Copeland, A.
author: Lapidus, A.
author: Glavina del Rio, T.
author: Dalin, E.
author: Tice, H.
author: Bruce, D.
author: Goodwin, L.
author: Pitluck, S.
author: Peters, L.
author: Ovchinnikova, G.
author: Chertkov, O.
author: Kyrpides, N.
author: Mavromatis, K.
author: Ivanova, N.
author: Brettin, T.
author: Detter, J.C.
author: Han, C.
author: Larimer, F.
author: Land, M.
author: Hauser, L.
author: Markowitz, V.
author: Cheng, J.-F.
author: Hugenholtz, P.
author: Woyke, T.
author: Wu, D.
author: Tindall, B.
author: Pomrenke, H.
author: Brambilla, E.
author: Klenk, H.-P.
author: Eisen, J.A.
journal: Submitted (29-FEB-2012) US DOE Joint Genome Institute, 2800 Mitchell Drive, Walnut Creek, CA 94598-1698, USA

position:1:1
position: 1
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:32131:1
position: 32131
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

feature:1-32131:1:source
so part of: sequence
organism: Singulisphaera acidiphila DSM 18658
mol type: genomic DNA
strain: DSM 18658
isolation source: sphagnum peat from the bog Obukhovskoe (acidic wetland)
culture collection: DSM:18658
type material: type strain of Singulisphaera acidiphila
plasmid: pSINAC03
country: Russia
lat lon: 58.233 N 36.2 E
collection date: 2008

886293
type: Taxonomy
SIO_000068: taxonomy

SINAC_RS37530
type: Gene
subclass of: SO_0000704
RO_0002162: 886293
locus tag: SINAC_RS37530
old locus tag: Sinac_7656
so part of: sequence
location: complement(45..1907)
location: region:45-1907:-1
so has part: feature:45-1907:-1:exon
subclass of: SO_0000010

position:45:-1
position: 45
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1907:-1
position: 1907
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:45-1907:-1:exon

SINAC_RS37530
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 886293
locus tag: SINAC_RS37530
old locus tag: Sinac_7656
inference: COORDINATES: similar to AA sequence:RefSeq:WP_015250745.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: ParB/RepB/Spo0J family partition protein
translation: MNNTMIEVKKLEKSPLNVRKTAAGIDDLLASIPKHGLMLNLNVYPGKKGKYFVFAGSRRLAALKALQAEGHFAADYAVPCRIYTKEEAHELSLVENTVRQAMHPADEFTAFAALIEQGHTVEQVSNRFGCTAKLVEQRLTLGKAAPELLDAYRAEKLTLECLMAFTVTDDHAKQMQVYASLEEWHSARDIRAMLTDEMAEAKSKLARFVGLDAYHAAGGVSRADLFGEQVYLENPDLLHQLAGEALETTRQTLAAEGWKWVEVSPDRDWSVIHGCSRIRPQPVDAPPELLAAKAEAEAELEAITEADGMDGDDSALAERQEAAETALADIEQKLESFVAYDPDEMSQAGCYVSIDKDGKLSVEKGLVRREDAKQLAGDGDARRAKPGGMPATLQRNLEGYRLQAAQVEIARNRLVALDLLVFTVACAVFNKGQPRDLDVLFRTQNPAVKEPTAAGEALQTIEEGLSLGWLHQDTEAEQFQAFTGLSDQQKLDLLAYCVASSLKPQLSTGREATACELALSLTAASMAGYWRPTRANYLGRIPRDQLLSLGSGLLGDQWSQARSRDKRSELADALERVFAEPEKVARSPQQLEMLQRWLPEGMAFGSVEEAPAPANEQVAA
SIO_010081: SINAC_RS37530
subclass of: SO_0000673
so part of: SINAC_RS37530
location: complement(45..1907)
location: region:45-1907:-1
so has part: feature:45-1907:-1:exon

WP_015250745.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:45-1907:-1:exon

SINAC_RS37535
type: Gene
subclass of: SO_0000704
RO_0002162: 886293
locus tag: SINAC_RS37535
old locus tag: Sinac_7657
so part of: sequence
location: complement(1970..2272)
location: region:1970-2272:-1
so has part: feature:1970-2272:-1:exon
subclass of: SO_0000010

position:1970:-1
position: 1970
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2272:-1
position: 2272
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1970-2272:-1:exon

SINAC_RS37535
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 886293
locus tag: SINAC_RS37535
old locus tag: Sinac_7657
inference: COORDINATES: similar to AA sequence:RefSeq:WP_015250746.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MDGFAAINIICLKLPKFPLGDTVITTNAESLLDPVDVQQGLSRHADGDWGEIPSEDRQLNECSLKQGGRLLSVYRSGGKRFWIITEADRSVTTVLMPEDY
SIO_010081: SINAC_RS37535
subclass of: SO_0000673
so part of: SINAC_RS37535
location: complement(1970..2272)
location: region:1970-2272:-1
so has part: feature:1970-2272:-1:exon

WP_015250746.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1970-2272:-1:exon

SINAC_RS37540
type: Gene
subclass of: SO_0000704
RO_0002162: 886293
locus tag: SINAC_RS37540
old locus tag: Sinac_7658
so part of: sequence
location: complement(2338..2610)
location: region:2338-2610:-1
so has part: feature:2338-2610:-1:exon
subclass of: SO_0000010

position:2338:-1
position: 2338
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2610:-1
position: 2610
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2338-2610:-1:exon

SINAC_RS37540
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 886293
locus tag: SINAC_RS37540
old locus tag: Sinac_7658
inference: COORDINATES: similar to AA sequence:RefSeq:WP_015250747.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MSSPAHKLRIGVLQATIWRNTNDKGTWYSVTPQRSYKQGDETWKETDSLGFDDILAMAKLLDQAHTWIFKQMQADAKSRKAREEANSGEE
SIO_010081: SINAC_RS37540
subclass of: SO_0000673
so part of: SINAC_RS37540
location: complement(2338..2610)
location: region:2338-2610:-1
so has part: feature:2338-2610:-1:exon

WP_015250747.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:2338-2610:-1:exon

SINAC_RS37545
type: Gene
subclass of: SO_0000704
RO_0002162: 886293
locus tag: SINAC_RS37545
old locus tag: Sinac_7659
so part of: sequence
location: complement(3241..4203)
location: region:3241-4203:-1
so has part: feature:3241-4203:-1:exon
subclass of: SO_0000010

position:3241:-1
position: 3241
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4203:-1
position: 4203
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3241-4203:-1:exon

SINAC_RS37545
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 886293
locus tag: SINAC_RS37545
old locus tag: Sinac_7659
inference: COORDINATES: similar to AA sequence:RefSeq:WP_015250748.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: prepilin-type N-terminal cleavage/methylation domain-containing protein
translation: MRKILNDLVMLCQYAGGMTPLQPLPNRPTPAHPPVKGFTLIELSIVLVIIALIVGGIMVGRDLIAAAQMRAVISQVEKYKTAVMTFKEKYNCLPGDCSQATQYWPADPECGIWNTASIGMACNGNGDGIIAGKSYSNPANEYKMNFDEVFGVWNQLALAGLIPGGYTSGRMCGGATIASPISNLASCPHNNIANVPASYGNSAVELMYTDNGMRGAVAGVTNAAHTFVISGPPAGGWAITIPLGGDGRAFSSNQTYYIDSKLDDGLPYSGRMTASWDQYGDYCGKSASGVNMYTMKNAVQSPYSASIPYAGCALFLSAGF
SIO_010081: SINAC_RS37545
subclass of: SO_0000673
so part of: SINAC_RS37545
location: complement(3241..4203)
location: region:3241-4203:-1
so has part: feature:3241-4203:-1:exon

WP_237722954.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:3241-4203:-1:exon

SINAC_RS37550
type: Gene
subclass of: SO_0000704
RO_0002162: 886293
locus tag: SINAC_RS37550
old locus tag: Sinac_7660
so part of: sequence
location: 4571..5686
location: region:4571-5686:1
so has part: feature:4571-5686:1:exon
subclass of: SO_0000010

position:4571:1
position: 4571
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5686:1
position: 5686
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4571-5686:1:exon

SINAC_RS37550
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 886293
locus tag: SINAC_RS37550
old locus tag: Sinac_7660
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MTNVRASGPRQFMRLRDSFRTAFPWNHHDLTRDGFRQWARKKRQPPINVDAHHWKPLREGEAVPREMVEAFSEYAALMLLVPAGECRLSVIAETCDPPEKKKTASGGRPRVAYASGWKYLYSFWADSFAIDESARCNDESDLLVAARYVFECVGWHDKRLSGNSAIAYAEGVMKRTLEEYAQALLLFWQTNEHAVLFATQKRGGTVERIGVSVCVAVTEDFYRRFRAGEAMESQIEPGDLVPQSQFVLIQAYAENVAIDLKQNKVARSLAQSRNALYQLASLFLPVQYDAWQPHMVTFAGSTENGKRQHAYGFSPTGAKLAETGKIIVEFAPPTPDKQGVGYVKALAEYLPMKSLIQIFQAYIESQRPLLE
SIO_010081: SINAC_RS37550
subclass of: SO_0000673
so part of: SINAC_RS37550
location: 4571..5686
location: region:4571-5686:1
so has part: feature:4571-5686:1:exon

WP_015250749.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:4571-5686:1:exon

SINAC_RS37555
type: Gene
subclass of: SO_0000704
RO_0002162: 886293
locus tag: SINAC_RS37555
old locus tag: Sinac_7661
so part of: sequence
location: 5824..6630
location: region:5824-6630:1
so has part: feature:5824-6630:1:exon
subclass of: SO_0000010

position:5824:1
position: 5824
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6630:1
position: 6630
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5824-6630:1:exon

SINAC_RS37555
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 886293
locus tag: SINAC_RS37555
old locus tag: Sinac_7661
inference: COORDINATES: similar to AA sequence:RefSeq:WP_015250750.1
GO function: GO:0003677 - DNA binding [Evidence IEA]
GO process: GO:0007059 - chromosome segregation [Evidence IEA]; GO:0000910 - cytokinesis [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: ParB/RepB/Spo0J family partition protein
translation: MPDTFLSIGIDQLMPDPTQPRKTFLKEEIERLAASVAARGMLQPLRVMFDETRGSYLIVTGESRYRAGLMAGMAALPCLLVEGQPDEAELLADRIVENSCRHDLRPLELARSLAKLRSLKKCTSGQLAVELGLSGASVCRAEALLSLPGDIQSLVDGGSIPESTAYELSRLPNEQSMRELALAVTAGKLSRDQVADAVRASVGKRHVRPKSARLPLRLDGGISVTVSAGQPLTWDDFNTAIDRIRKEAKKLYEGGKDITELARSLKAS
SIO_010081: SINAC_RS37555
subclass of: SO_0000673
so part of: SINAC_RS37555
location: 5824..6630
location: region:5824-6630:1
so has part: feature:5824-6630:1:exon

WP_015250750.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:5824-6630:1:exon

SINAC_RS37560
type: Gene
subclass of: SO_0000704
RO_0002162: 886293
locus tag: SINAC_RS37560
old locus tag: Sinac_7662
so part of: sequence
location: 6721..7929
location: region:6721-7929:1
so has part: feature:6721-7929:1:exon
subclass of: SO_0000010

position:6721:1
position: 6721
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7929:1
position: 7929
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6721-7929:1:exon

SINAC_RS37560
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 886293
locus tag: SINAC_RS37560
old locus tag: Sinac_7662
inference: COORDINATES: similar to AA sequence:RefSeq:WP_015250751.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MTSNVKWSLRRECRFLLLFALPCLLAAAPPAETTAPPAAVKKPRKLDPRDAWIAAQPRFIQADREICEAIEARLASIKNYLEERKAGARPFAAAVLSLKGKMLYTEGVATQVVDAVAGLFGSKPSEDGFANYVRECFHEHVLDESKLQKVIDDAVAGFAGDVRDIDSQFLVDLRADLADDAIKLEIDLPQTQAKASMNIAVKIAVNDAVKVAGKDIAAMIVTQGVSIVAGNAIGDTLNRPGDSGKRKLAVNAAVGYAVDKAIDGVVAGAGFDPLAKVTETATEAIDITARYVIDGGKEIAYHYPIMFKISQLHPNTAVRAACFDAVEVMDRRDTLGLRHRLYRLQFEQSRRRGLAVFNYLLGPDVQVPEYMLYPPVAPDTLPEDEEIISDAAAIKAFFGVNR
SIO_010081: SINAC_RS37560
subclass of: SO_0000673
so part of: SINAC_RS37560
location: 6721..7929
location: region:6721-7929:1
so has part: feature:6721-7929:1:exon

WP_237722956.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:6721-7929:1:exon

SINAC_RS37565
type: Gene
subclass of: SO_0000704
RO_0002162: 886293
locus tag: SINAC_RS37565
old locus tag: Sinac_7663
so part of: sequence
location: 7941..8855
location: region:7941-8855:1
so has part: feature:7941-8855:1:exon
subclass of: SO_0000010

position:7941:1
position: 7941
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:8855:1
position: 8855
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7941-8855:1:exon

SINAC_RS37565
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 886293
locus tag: SINAC_RS37565
old locus tag: Sinac_7663
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MTSLLAAVLVMGLAVPAHAGLPSKVVQETAEFLMKKFGREAAEEGAERLAGKVASAVARHGDDVILAVRKAGPKALSLADEAGENAPQVLRFLSRHGDDGVRALSHPESLGLLSRYGDDAAEMLIRHRAAAAPVVARLGEPAVKALGAVGPQAGRRMAMLAGDLAESGQAPEVMGVIARYGDPAMDFLWRNKAILAGGATLAAFLADPEPYINGTADIARVGVEGANQLAATVAENAVKPTLEAAGKVASNAVEAARWPLTALLVAGIGGGVLIVRAGFFKSLPVRIAFKLAGKQAARTLFKKG
SIO_010081: SINAC_RS37565
subclass of: SO_0000673
so part of: SINAC_RS37565
location: 7941..8855
location: region:7941-8855:1
so has part: feature:7941-8855:1:exon

WP_044148304.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:7941-8855:1:exon

SINAC_RS37570
type: Gene
subclass of: SO_0000704
RO_0002162: 886293
locus tag: SINAC_RS37570
old locus tag: Sinac_7664
so part of: sequence
location: 8864..9058
location: region:8864-9058:1
so has part: feature:8864-9058:1:exon
subclass of: SO_0000010

position:8864:1
position: 8864
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:9058:1
position: 9058
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:8864-9058:1:exon

SINAC_RS37570
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 886293
locus tag: SINAC_RS37570
old locus tag: Sinac_7664
inference: COORDINATES: similar to AA sequence:RefSeq:WP_015250753.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MNGNGPCYDWAARAAAQIVNLHDPSAGKAEEFGRILFVILEAMRAAHAELTFHAELAWLEPSDN
SIO_010081: SINAC_RS37570
subclass of: SO_0000673
so part of: SINAC_RS37570
location: 8864..9058
location: region:8864-9058:1
so has part: feature:8864-9058:1:exon

WP_015250753.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:8864-9058:1:exon

SINAC_RS38390
type: Gene
subclass of: SO_0000704
RO_0002162: 886293
locus tag: SINAC_RS38390
old locus tag: Sinac_7665
so part of: sequence
location: 9191..11074
location: region:9191-11074:1
so has part: feature:9191-11074:1:exon
subclass of: SO_0000010

position:9191:1
position: 9191
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:11074:1
position: 11074
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:9191-11074:1:exon

SINAC_RS38390
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 886293
locus tag: SINAC_RS38390
old locus tag: Sinac_7665
inference: COORDINATES: protein motif:HMM:NF014581.2
GO component: GO:0016020 - membrane [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: type IV secretory system conjugative DNA transfer family protein
translation: MIATFNALIIRLLLVGACAAAGGGAVMLGMRYPPVACIVLAGLVWRSLRRRHGFGWSHGTARWAELHDFCRYGLLGHRGPILGRFAPSRPLRWQGIRTLFSLRTGHEMACRGFLAAFLGARWNRDRMVRLPSHVHMMTAAPAGRGKGVSVVIPNLLALPGSVVVTDPKGENFKLTAEHRRKRFGHRVLRLDPFGLCGPGSDSFNPLSCIDPQAPDFADQCRDVANMLVVRSGTEHDPHWNDSAELVLCAFIAFVCGCEADPAKRTLSVVRGIVSSPDSFKRAVATMQKVEHPEIRRFGTLLEWFKDKELNSVLTSVNRHTQFMDSPAISAVLNGTNFDPRELRGGNRSLYLILPADRISTLAPLMRLWVGMTIRLLARGGADESRPVLFLLDEAAHLGRIQVLEDAVTLMRGMGIRLWFFFQSLAQLKACYGDKAEVMLDCFDTQQFFGSNSYESAEAISRRIGECTISTVSYTENSGWSRPDSVAGKEPQPGSYSGGSSSSTSDMARRLIKPEEILCMPDHTALVLHRNLPPMSVRLLRYYDAPEFRKGRSGRQRGLGLPAGVAAAALLAIGVTFAAFAYQLPDTGGPRFAEMPAAGLFGREEEPAYESPILQPAAYAPRARRHRR
SIO_010081: SINAC_RS38390
subclass of: SO_0000673
so part of: SINAC_RS38390
location: 9191..11074
location: region:9191-11074:1
so has part: feature:9191-11074:1:exon

WP_015250754.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:9191-11074:1:exon

SINAC_RS37580
type: Gene
subclass of: SO_0000704
RO_0002162: 886293
locus tag: SINAC_RS37580
old locus tag: Sinac_7666
so part of: sequence
location: 11191..11640
location: region:11191-11640:1
so has part: feature:11191-11640:1:exon
subclass of: SO_0000010

position:11191:1
position: 11191
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:11640:1
position: 11640
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:11191-11640:1:exon

SINAC_RS37580
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 886293
locus tag: SINAC_RS37580
old locus tag: Sinac_7666
inference: COORDINATES: similar to AA sequence:RefSeq:WP_015250755.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MPEEIQGESGGVMNWAAGVVANVYNAVKEGGQIQAAGRQGIDELGAALKAFPDAIQMDEPGTAFNPLYRNMEGEPPSPGVLVVAETAAPLPSPSEIAQAEQPRGSVHGEALEASTQPLPSPSEIANDPTPYAPPQDQGNVHGQEMGREM
SIO_010081: SINAC_RS37580
subclass of: SO_0000673
so part of: SINAC_RS37580
location: 11191..11640
location: region:11191-11640:1
so has part: feature:11191-11640:1:exon

WP_015250755.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:11191-11640:1:exon

SINAC_RS37585
type: Gene
subclass of: SO_0000704
RO_0002162: 886293
locus tag: SINAC_RS37585
old locus tag: Sinac_7667
so part of: sequence
location: 11704..12132
location: region:11704-12132:1
so has part: feature:11704-12132:1:exon
subclass of: SO_0000010

position:11704:1
position: 11704
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:12132:1
position: 12132
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:11704-12132:1:exon

SINAC_RS37585
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 886293
locus tag: SINAC_RS37585
old locus tag: Sinac_7667
inference: COORDINATES: similar to AA sequence:RefSeq:WP_015250756.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: pentapeptide repeat-containing protein
translation: MSQQKPAPPARIDWRGADMRNVNMSGLSLEGVDMRASDCSGSNFSNTNLRYADFRGAILNGTNFQNANLYGAKMQGVEAHQADFRGANVQLANFGGAYLDGTILPPAAAKPVLPSPSEIANQPAPSPGQSNRQERGRSNGRG
SIO_010081: SINAC_RS37585
subclass of: SO_0000673
so part of: SINAC_RS37585
location: 11704..12132
location: region:11704-12132:1
so has part: feature:11704-12132:1:exon

WP_015250756.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:11704-12132:1:exon

SINAC_RS37590
type: Gene
subclass of: SO_0000704
RO_0002162: 886293
locus tag: SINAC_RS37590
old locus tag: Sinac_7668
so part of: sequence
location: complement(12299..12676)
location: region:12299-12676:-1
so has part: feature:12299-12676:-1:exon
subclass of: SO_0000010

position:12299:-1
position: 12299
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:12676:-1
position: 12676
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:12299-12676:-1:exon

SINAC_RS37590
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 886293
locus tag: SINAC_RS37590
old locus tag: Sinac_7668
inference: COORDINATES: similar to AA sequence:RefSeq:WP_015250757.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MGLRRDKFRNIVGGITSQPEDEPETAAAPPPAEQGSVADDSDSPVEPSPASDTRRFAKRGRPKGSKTEPADKGRKVKVSLFLSEVIVNDLYEWAHDDKIHPGTMFERALKPFHEKEEKRRKAGKE
SIO_010081: SINAC_RS37590
subclass of: SO_0000673
so part of: SINAC_RS37590
location: complement(12299..12676)
location: region:12299-12676:-1
so has part: feature:12299-12676:-1:exon

WP_015250757.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:12299-12676:-1:exon

SINAC_RS37595
type: Gene
subclass of: SO_0000704
RO_0002162: 886293
locus tag: SINAC_RS37595
old locus tag: Sinac_7669
so part of: sequence
location: complement(12667..13407)
location: region:12667-13407:-1
so has part: feature:12667-13407:-1:exon
subclass of: SO_0000010

position:12667:-1
position: 12667
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:13407:-1
position: 13407
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:12667-13407:-1:exon

SINAC_RS37595
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 886293
locus tag: SINAC_RS37595
old locus tag: Sinac_7669
inference: COORDINATES: similar to AA sequence:RefSeq:WP_015250758.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: ParA family protein
translation: MAVLAVVNQKGGVGKTTTTAALGVLLARQGRGVHLVDMDHQADLTSAFNYNDADGQLYEALSKRGPLPVVPISDNLTLTPSSIDLARGETQFVAEVGRENLLKTCLAKAKIPADTTVLIDCPPSLGILTSNCLAVADALIVVVKPGGFEMRAFATLEELVKTYREQVNPKLMIAGFIMTEVHSRRAINDVVEEEIGKLYPLLGRIRVESELMYATSEGRILKLNRSKALEDYAAAAEKLKEVMKWD
SIO_010081: SINAC_RS37595
subclass of: SO_0000673
so part of: SINAC_RS37595
location: complement(12667..13407)
location: region:12667-13407:-1
so has part: feature:12667-13407:-1:exon

WP_015250758.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:12667-13407:-1:exon

SINAC_RS37600
type: Gene
subclass of: SO_0000704
RO_0002162: 886293
locus tag: SINAC_RS37600
old locus tag: Sinac_7670
so part of: sequence
location: 13527..13916
location: region:13527-13916:1
so has part: feature:13527-13916:1:exon
subclass of: SO_0000010

position:13527:1
position: 13527
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:13916:1
position: 13916
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:13527-13916:1:exon

SINAC_RS37600
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 886293
locus tag: SINAC_RS37600
old locus tag: Sinac_7670
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MGQVATTDKPKLDGRFAAYAAGRITAYSLMRGDVMDNDSQEAISPKKPKRAAAKPADRKPGRTDGRTKATLLLPDSVDFRLTTLAKSLKLDRSTFAAQLLDAGLRRYALDAALRLHSGDTAPEPDRAGE
SIO_010081: SINAC_RS37600
subclass of: SO_0000673
so part of: SINAC_RS37600
location: 13527..13916
location: region:13527-13916:1
so has part: feature:13527-13916:1:exon

WP_015250759.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:13527-13916:1:exon

SINAC_RS37605
type: Gene
subclass of: SO_0000704
RO_0002162: 886293
locus tag: SINAC_RS37605
old locus tag: Sinac_7671
so part of: sequence
location: complement(14728..16218)
location: region:14728-16218:-1
so has part: feature:14728-16218:-1:exon
subclass of: SO_0000010

position:14728:-1
position: 14728
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:16218:-1
position: 16218
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:14728-16218:-1:exon

SINAC_RS37605
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 886293
locus tag: SINAC_RS37605
old locus tag: Sinac_7671
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MMETDPKPTTELVPVNTIRVETAFTRYPMHRLARKGNIEISISDGDERSGETRWEVDYSKKHGQPGPLAYKLDTLIINRRIEEARRPISRLLKLGSLSDICRELGLCDSGKNRSDVKKALYQNAFAGISTKTRYKQVDGTENTVEAAFTRYSVIFTGEKLPNGQKADGVYITLNDVFMRVINGAMTRPLDYDYLKSLPPAPQRFYELLSYQMYAALKYDRPRAKLVYSEFCAHAPQMRHAEWKRARAQMSKVIQPHLESGYIGKVDYQDTVDRDGQPDWIMLYMPGPKARAEFRAFNKRGGPNVLEIEPLESSLEITGPVVSELEAELIAFGVTPEIAGELVSAYSEERIKAQLERVSWAINKKPDKIDEPAAYLVEAIKKDFAAPKSFVSHAEKQRREEAKKKKDRLASEALRRQKQQEADEAAELQRADDYYAALSPEDQAAINSQADALATPGDLAGELAEGFESLRRIGQLIRRREFIRNLLRSSEPMAADA
SIO_010081: SINAC_RS37605
subclass of: SO_0000673
so part of: SINAC_RS37605
location: complement(14728..16218)
location: region:14728-16218:-1
so has part: feature:14728-16218:-1:exon

WP_020467754.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:14728-16218:-1:exon

SINAC_RS37610
type: Gene
subclass of: SO_0000704
RO_0002162: 886293
locus tag: SINAC_RS37610
old locus tag: Sinac_7672
so part of: sequence
location: complement(17040..17225)
location: region:17040-17225:-1
so has part: feature:17040-17225:-1:exon
subclass of: SO_0000010

position:17040:-1
position: 17040
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:17225:-1
position: 17225
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:17040-17225:-1:exon

SINAC_RS37610
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 886293
locus tag: SINAC_RS37610
old locus tag: Sinac_7672
inference: COORDINATES: similar to AA sequence:RefSeq:WP_015250761.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MPPLEQLFTLEIEFHRRLRMDAPGVPDATALHTSYALQSGYEPLLRGIGRVTAPSRDSYRS
SIO_010081: SINAC_RS37610
subclass of: SO_0000673
so part of: SINAC_RS37610
location: complement(17040..17225)
location: region:17040-17225:-1
so has part: feature:17040-17225:-1:exon

WP_015250761.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:17040-17225:-1:exon

SINAC_RS37615
type: Gene
subclass of: SO_0000704
RO_0002162: 886293
locus tag: SINAC_RS37615
old locus tag: Sinac_7673
so part of: sequence
location: 17610..18176
location: region:17610-18176:1
so has part: feature:17610-18176:1:exon
subclass of: SO_0000010

position:17610:1
position: 17610
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:18176:1
position: 18176
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:17610-18176:1:exon

SINAC_RS37615
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 886293
locus tag: SINAC_RS37615
old locus tag: Sinac_7673
inference: COORDINATES: similar to AA sequence:RefSeq:WP_015250763.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MRRNAWNVLAIITFVVSQGAIVSADEWLGMKEKSEGHTRAKGNVEYREETRAGKEFVVIKVNVWTKVSGQGKTGRGHAIYTVWKADGTPYKIIDSRKYASTGLTDSSNENHNETEVRFLKDSYFGNFDTDELDVFAEDKGGVPTSTSDLAKWIKEVAGPEIDKARLDVMKAAAGTIKEGTNWIVRKKK
SIO_010081: SINAC_RS37615
subclass of: SO_0000673
so part of: SINAC_RS37615
location: 17610..18176
location: region:17610-18176:1
so has part: feature:17610-18176:1:exon

WP_015250762.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:17610-18176:1:exon

SINAC_RS39410
type: Gene
subclass of: SO_0000704
RO_0002162: 886293
locus tag: SINAC_RS39410
old locus tag: Sinac_7674
so part of: sequence
location: 18472..19023
location: region:18472-19023:1
so has part: feature:18472-19023:1:exon
subclass of: SO_0000010

position:18472:1
position: 18472
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:19023:1
position: 19023
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:18472-19023:1:exon

SINAC_RS39410
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 886293
locus tag: SINAC_RS39410
old locus tag: Sinac_7674
inference: COORDINATES: similar to AA sequence:RefSeq:WP_015250762.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MLRIASFWMVAVALLTAFTSDVKADEWFGMKEESRGHTRAKGNVEYREDGNDVVIKVNVWTKVRGRSRTGRGHAIYTIFKADGQVYRTIDARKYASTNVSQNERERDSSTEVRIPKAEFNSSLDTDELLVFAEEKGGMPNNINDMRNWLKSFSNEIDKAVSDVSKSAVGSVKEGGNWIVKKRR
SIO_010081: SINAC_RS39410
subclass of: SO_0000673
so part of: SINAC_RS39410
location: 18472..19023
location: region:18472-19023:1
so has part: feature:18472-19023:1:exon

WP_237722955.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:18472-19023:1:exon

SINAC_RS37620
type: Gene
subclass of: SO_0000704
RO_0002162: 886293
locus tag: SINAC_RS37620
old locus tag: Sinac_7675
so part of: sequence
location: complement(19066..20031)
location: region:19066-20031:-1
so has part: feature:19066-20031:-1:exon
subclass of: SO_0000010

position:19066:-1
position: 19066
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:20031:-1
position: 20031
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:19066-20031:-1:exon

SINAC_RS37620
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 886293
locus tag: SINAC_RS37620
old locus tag: Sinac_7675
inference: COORDINATES: similar to AA sequence:RefSeq:WP_015250764.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: tyrosine-type recombinase/integrase
translation: MSGHQIEITRPSSGLILPAVIADAGEHAGRRFVEFLTATIRNKNTRKAYGRAIADFFAWCEQHRLSLPAIEPVHVAAYIEQLTVTKSAPTVKQHLAAIRMCFDWLTSGGVIRFNPAASVRGPKHSVKRGKTPVLTADEARQLLDSIDISTVIGLRDRALIAVMVYSFARVGAALALKVEDYYTEGRRAWFRLHEKGGKRHEVPAHHNAEHYLDAYIEAAGIAGDKKSTLFRSINRQRTLTSRPLVARNALDMVKRRAIAAGLDASTCNHTFRATGITAYLENGGTIEKAQQIANHESPKTTKLYDRTNDQITLDEVERIAI
SIO_010081: SINAC_RS37620
subclass of: SO_0000673
so part of: SINAC_RS37620
location: complement(19066..20031)
location: region:19066-20031:-1
so has part: feature:19066-20031:-1:exon

WP_015250764.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:19066-20031:-1:exon

SINAC_RS40455
type: Gene
subclass of: SO_0000704
RO_0002162: 886293
locus tag: SINAC_RS40455
so part of: sequence
location: complement(20028..20450)
location: region:20028-20450:-1
so has part: feature:20028-20450:-1:exon
subclass of: SO_0000010

position:20028:-1
position: 20028
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:20450:-1
position: 20450
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:20028-20450:-1:exon

SINAC_RS40455
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 886293
locus tag: SINAC_RS40455
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MSKEKPTQIKSSRAIPIDSQAHTEAFGRMVLGTIHTVPEYVRDSVLPPDYPGRTTVQVAGSGLGAGGFAVEQIISATTASGDPLHKTYRYEYTAILGGGSVRQDVTYDYSTSTNGQVNDHHQHPEETKQRLGNWPGFESL
SIO_010081: SINAC_RS40455
subclass of: SO_0000673
so part of: SINAC_RS40455
location: complement(20028..20450)
location: region:20028-20450:-1
so has part: feature:20028-20450:-1:exon

WP_157579530.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:20028-20450:-1:exon

SINAC_RS37625
type: Gene
subclass of: SO_0000704
RO_0002162: 886293
locus tag: SINAC_RS37625
old locus tag: Sinac_7676
so part of: sequence
location: 20660..20938
location: region:20660-20938:1
so has part: feature:20660-20938:1:exon
subclass of: SO_0000010

position:20660:1
position: 20660
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:20938:1
position: 20938
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:20660-20938:1:exon

SINAC_RS37625
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 886293
locus tag: SINAC_RS37625
old locus tag: Sinac_7676
inference: COORDINATES: protein motif:HMM:TIGR01439.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: AbrB/MazE/SpoVT family DNA-binding domain-containing protein
translation: MQTLDKSHETFRARIDPAGRVLIPATTRHRLGIDQGDELIVEVDDRGIHITTAQQAVKEVQAFFSDIKPTSGLLSEELIRDRREEAERESRG
SIO_010081: SINAC_RS37625
subclass of: SO_0000673
so part of: SINAC_RS37625
location: 20660..20938
location: region:20660-20938:1
so has part: feature:20660-20938:1:exon

WP_020467752.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:20660-20938:1:exon

SINAC_RS37630
type: Gene
subclass of: SO_0000704
RO_0002162: 886293
locus tag: SINAC_RS37630
old locus tag: Sinac_7677
so part of: sequence
location: 20931..21314
location: region:20931-21314:1
so has part: feature:20931-21314:1:exon
subclass of: SO_0000010

position:20931:1
position: 20931
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:21314:1
position: 21314
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:20931-21314:1:exon

SINAC_RS37630
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 886293
locus tag: SINAC_RS37630
old locus tag: Sinac_7677
inference: COORDINATES: similar to AA sequence:RefSeq:WP_015250766.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: type II toxin-antitoxin system VapC family toxin
translation: MVETVLDASALIAFLRNEPGADKVAAVLASSCMSAVNLGETIGKLVEYGKPLDEVAYQIERLHIAIIPFDGEQAKILASLWKITRPVGLSLADRACLALGLKRQLPVMTTDRDWSKVDVGVKVEQIR
SIO_010081: SINAC_RS37630
subclass of: SO_0000673
so part of: SINAC_RS37630
location: 20931..21314
location: region:20931-21314:1
so has part: feature:20931-21314:1:exon

WP_015250766.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:20931-21314:1:exon

SINAC_RS37635
type: Gene
subclass of: SO_0000704
RO_0002162: 886293
locus tag: SINAC_RS37635
so part of: sequence
location: complement(21431..22990)
location: region:21431-22990:-1
so has part: feature:21431-22990:-1:exon
subclass of: SO_0000010

position:21431:-1
position: 21431
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:22990:-1
position: 22990
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:21431-22990:-1:exon

SINAC_RS37635
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 886293
locus tag: SINAC_RS37635
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MSFSKNLDRLITPGVYARGIKVKVRWGQLIRASVALSEDQSRLVTSEKLVQLDSLGKIRGGIVTRANGYFLVREIPFDQIPARFKMTRGDVKRLAVITDGLDFMAKIEREFLKPVIKGPESLESAFGVRRSDIRLFDVKDDKKALEQRHANGALAYLRRGETVNFKTSEDELKGGIPSLRPQVKNRKPFWYSLQGEQTARTRIVFPEHLSNRYVFTLISDSDPSVIIDKLYLFEPKSDESAQIIHAALNSLFSWYQVELRGRSQLGQGVLELKIPDFAGLLVINPATMSAKQKSALLKAFADMPAPGSGPSFSELGTAARHAFDLTYLKLCGFSDPEAMVLRLEQELRALAGERIERRLSVSEAKVSRRKVTNVAASVDAYATRLAASIEPHPDPRSFLEEGAQTETVAILAPVEGALEVGVELFDQGEVTAGGICVARAGSIQAAQFVRGVLMIQPDLSQVEVPTAKFLEKPVSDWHRECRRWHKKFKTTAEKTLVGLDDPRTRLAVEQRALRLLHAF
SIO_010081: SINAC_RS37635
subclass of: SO_0000673
so part of: SINAC_RS37635
location: complement(21431..22990)
location: region:21431-22990:-1
so has part: feature:21431-22990:-1:exon

WP_020467751.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:21431-22990:-1:exon

SINAC_RS37640
type: Gene
subclass of: SO_0000704
RO_0002162: 886293
locus tag: SINAC_RS37640
so part of: sequence
location: complement(22987..25065)
location: region:22987-25065:-1
so has part: feature:22987-25065:-1:exon
subclass of: SO_0000010

position:22987:-1
position: 22987
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:25065:-1
position: 25065
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:22987-25065:-1:exon

SINAC_RS37640
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 886293
locus tag: SINAC_RS37640
inference: COORDINATES: protein motif:HMM:NF014442.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: N-6 DNA methylase
translation: MPTDAMNELTFAGWLAEFTATRAKRREDAGEPVLIASAAIEERQVDAEGSVRRCDLRFNSSSGRKLASGELKRPEVPEGRDPRNEKLRFDARRKAVARGLPYYFTCNIADVVLYQVANNPTEDDLEVGAFNLAPITRSGQAEAYRAQIDKQWSEFLDALEVKLTAIGRTRPTVTTEDVIAIRDAIYAVANEVLPRILRRVRADPSLAEELRQESARSFNFPAALQEKFPDKFREELIQMLRFGTFVVTQKLILYRVLEDAGPRRSDPYRLDQLDVPRASTDPQAIKTVLDQAFSLAIRRSKDYETAFSPQNFVPLVFTDPEGAQETAECQIGEVWHQLLTTVKNVSWLSISQNIVGLLYEVIVEERFRHQLGQFYTPEDVVDLLTGFAIRAPGELVLDPATGGGSFLRSAYHRKRALGENHASALATIWGCEITAFAAELSTVTLVTSDTHEPAAYPRVLLRDFFELRPGLETELEIPGELGRLKIPTEFDAVIGNPPYISYRRITNQPKILNALATARDDITMPKFTGKSDAYLWFIVHATQFLKNGGRLSFVVSSAILFADYGIPLIQFIGHHFRIRAIVDSTVERWFADADTNTVLLLLERETDAEARSSNSIRFVRLRRPLAQLIPDPSSPDRRGRIEELVAQLLEASATEDDPRMQVNLVVQGTDGGLQIEAGNDDDEEGLLEEDDE
SIO_010081: SINAC_RS37640
subclass of: SO_0000673
so part of: SINAC_RS37640
location: complement(22987..25065)
location: region:22987-25065:-1
so has part: feature:22987-25065:-1:exon

WP_020467750.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:22987-25065:-1:exon

SINAC_RS37645
type: Gene
subclass of: SO_0000704
RO_0002162: 886293
locus tag: SINAC_RS37645
old locus tag: Sinac_7680
so part of: sequence
location: 25321..25587
location: region:25321-25587:1
so has part: feature:25321-25587:1:exon
subclass of: SO_0000010

position:25321:1
position: 25321
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:25587:1
position: 25587
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:25321-25587:1:exon

SINAC_RS37645
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 886293
locus tag: SINAC_RS37645
old locus tag: Sinac_7680
inference: COORDINATES: similar to AA sequence:RefSeq:WP_015250768.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MRWKNRRQRPKDLISASEMACYDYCAEQWRLEYGLGLEPANGKSLAAGDRHHARKAVAERVAGGSIRLGRALVLLAALGLLLWLAFTR
SIO_010081: SINAC_RS37645
subclass of: SO_0000673
so part of: SINAC_RS37645
location: 25321..25587
location: region:25321-25587:1
so has part: feature:25321-25587:1:exon

WP_015250768.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:25321-25587:1:exon

SINAC_RS37650
type: Gene
subclass of: SO_0000704
RO_0002162: 886293
locus tag: SINAC_RS37650
old locus tag: Sinac_7681
so part of: sequence
location: 25584..26093
location: region:25584-26093:1
so has part: feature:25584-26093:1:exon
subclass of: SO_0000010

position:25584:1
position: 25584
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:26093:1
position: 26093
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:25584-26093:1:exon

SINAC_RS37650
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 886293
locus tag: SINAC_RS37650
old locus tag: Sinac_7681
inference: COORDINATES: protein motif:HMM:NF024117.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: Dna2/Cas4 domain-containing protein
translation: MTGGIPWLVAGAVLAAILGLLLMRLGTGIRQRRGLDSGKTVSLDKVTLTSRRYGLTGRPDRLVKTGGTINPEEWKSARTVRRWHRTQMGVYFLLIEDQLGVKPSHGFIVCGDDSRHRVENDAALRERVLDLAGRIRQARAAIHQPIPVNPTPYQCPPCGQRGNCRQARA
SIO_010081: SINAC_RS37650
subclass of: SO_0000673
so part of: SINAC_RS37650
location: 25584..26093
location: region:25584-26093:1
so has part: feature:25584-26093:1:exon

WP_015250769.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:25584-26093:1:exon

SINAC_RS37655
type: Gene
subclass of: SO_0000704
RO_0002162: 886293
locus tag: SINAC_RS37655
old locus tag: Sinac_7682
so part of: sequence
location: complement(26429..26899)
location: region:26429-26899:-1
so has part: feature:26429-26899:-1:exon
subclass of: SO_0000010

position:26429:-1
position: 26429
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:26899:-1
position: 26899
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:26429-26899:-1:exon

SINAC_RS37655
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 886293
locus tag: SINAC_RS37655
old locus tag: Sinac_7682
inference: COORDINATES: similar to AA sequence:RefSeq:WP_015250770.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MDKKQFFERFPETSVIGRDATPDELVVYFDHNGEVGAWRENRRTTTGEGEILGLDDAAAARHRYAHQRAPQPQDLDSGLVERNWVRTSRKRGMMTERTLEGEDVSASFLDRLGQLQHVAGKVTRNDAGELVVESWMDGVRQEIAVTRNASVNVKGR
SIO_010081: SINAC_RS37655
subclass of: SO_0000673
so part of: SINAC_RS37655
location: complement(26429..26899)
location: region:26429-26899:-1
so has part: feature:26429-26899:-1:exon

WP_015250770.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:26429-26899:-1:exon

SINAC_RS37660
type: Gene
subclass of: SO_0000704
RO_0002162: 886293
locus tag: SINAC_RS37660
old locus tag: Sinac_7683
so part of: sequence
location: complement(26945..27151)
location: region:26945-27151:-1
so has part: feature:26945-27151:-1:exon
subclass of: SO_0000010

position:26945:-1
position: 26945
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:27151:-1
position: 27151
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:26945-27151:-1:exon

SINAC_RS37660
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 886293
locus tag: SINAC_RS37660
old locus tag: Sinac_7683
inference: COORDINATES: similar to AA sequence:RefSeq:WP_015250771.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MKLFRYDLKDATEETLEKVLIGEFASSDLAIAHICRRRPQTAMLSIIPTGADGILDETMWVLECRPAN
SIO_010081: SINAC_RS37660
subclass of: SO_0000673
so part of: SINAC_RS37660
location: complement(26945..27151)
location: region:26945-27151:-1
so has part: feature:26945-27151:-1:exon

WP_015250771.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:26945-27151:-1:exon

SINAC_RS37665
type: Gene
subclass of: SO_0000704
RO_0002162: 886293
locus tag: SINAC_RS37665
old locus tag: Sinac_7684
so part of: sequence
location: 27668..30502
location: region:27668-30502:1
so has part: feature:27668-30502:1:exon
subclass of: SO_0000010

position:27668:1
position: 27668
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:30502:1
position: 30502
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:27668-30502:1:exon

SINAC_RS37665
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 886293
locus tag: SINAC_RS37665
old locus tag: Sinac_7684
inference: COORDINATES: similar to AA sequence:RefSeq:WP_015250772.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: relaxase domain-containing protein
translation: MLRMNPIKSVKRAELYYEKSDAGYYQDGGLGCEWLGKGADKLGLDGEPDYEHFKRLIRGLDPHTGDQLTAKLIENRIPAWDLTASVPKGVTTALERGDDRIQAAMWASVREAFAMLEEYATCRVRIDGLQDDRVTGNLVGYVVEHADTRPVEDKSLPEGHRWRWMPDWDRHLHVVVANVTHDEVEDKIKAVKFRPIMDLRRYFDRCFDTILANKLTHELGYETETTWKKNGKYHSWDIKGIPKSVIEKNSRRSVEVDELEEAIVAGKQAANPTAPDHLSAVAKDKLGGTSRHGKRDDLTLAECREYWASRITDDEGSAIDETIRRARLGLNPRPDRDQAADKAIDFALRHHGEQESAFRWEELAATAMERSMGQASPADIERAAKRTGVIFAHQNGQRMCTTAELQTEDRYIAGRSAAGRGQAEPVGVPEGFSRRMADGKLLNDGQWRAATGLLASSNAVNLVEGPAGAGKSSMLGKFDEGMRMAGETVTYLASTSDAAKELAKGGFDVKTVAHFLLDERLQNAAAGGRVVIDESSMLGHKDAVKLFRLAEKHDLKLIFVGDAMQHGSVPRGALLRVLKEYGGIQPYLLTDILRQQDPAQRAAVKLLSEGDTLAGLQALDDLGHVQEIGDDAERNRAMAAEYVQAQKDGKSALVVSPTHAEAAGITAEIRRQLREAGKLGEEERPFLKLVNANASEAERGLASTYQTGDVLLFHQNAKGGFKKGQRLTVIDPDALPLSEAAKFSLYRPETLPIAAGDRIRFTGTVKSFQGDHSYKNGDTGTVREFTPGGNLRLEDGRVIRADAGLLRHGFVETSFGAQGRTVQRAILGMSSQSLGATNQEQLYVSASRAKETVSLYTDDKAAVMEAVQRSSRKLAALDLLSDQQKAEEKRRRLLTGQQERQRRLGLIARLRSAWERVMPPQPPRMPPTHLNRLGQQEQGNYHER
SIO_010081: SINAC_RS37665
subclass of: SO_0000673
so part of: SINAC_RS37665
location: 27668..30502
location: region:27668-30502:1
so has part: feature:27668-30502:1:exon

WP_015250772.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:27668-30502:1:exon

SINAC_RS37670
type: Gene
subclass of: SO_0000704
RO_0002162: 886293
locus tag: SINAC_RS37670
old locus tag: Sinac_7685
so part of: sequence
location: 30492..31022
location: region:30492-31022:1
so has part: feature:30492-31022:1:exon
subclass of: SO_0000010

position:30492:1
position: 30492
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:31022:1
position: 31022
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:30492-31022:1:exon

SINAC_RS37670
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 886293
locus tag: SINAC_RS37670
old locus tag: Sinac_7685
inference: COORDINATES: similar to AA sequence:RefSeq:WP_015250773.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MNDDTGGNVVDLQRPKLPKQFSIEAILKGPASPEPVPPPAPAPEAVPEAAGIEAADTLPLPGSAYQACSRVANKPQITLHFLLANQSREGFAYADLRRIRLLPAADPGSGPELVLRFVEAEITDVRLIGRNLDMLYELLGRHAVGWVRQLPPKWDFSPKEAKAVVITGIEITTPKK
SIO_010081: SINAC_RS37670
subclass of: SO_0000673
so part of: SINAC_RS37670
location: 30492..31022
location: region:30492-31022:1
so has part: feature:30492-31022:1:exon

WP_015250773.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:30492-31022:1:exon

SINAC_RS37675
type: Gene
subclass of: SO_0000704
RO_0002162: 886293
locus tag: SINAC_RS37675
old locus tag: Sinac_7686
so part of: sequence
location: complement(31046..31621)
location: region:31046-31621:-1
so has part: feature:31046-31621:-1:exon
subclass of: SO_0000010

position:31046:-1
position: 31046
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:31621:-1
position: 31621
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:31046-31621:-1:exon

SINAC_RS37675
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 886293
locus tag: SINAC_RS37675
old locus tag: Sinac_7686
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MIAIETETVEQDGHTYRIAIYPDGDTPNPLDDWSEMGSILSLNRRHANFDPGGIEAAIDGNPDAVALSYFEHGLCCWSVAGELPAANRSPFDSVSFAGIWLPDAETLESARRYGGSTRRHFMRQRAGQACDVYTQWCNGDIYGYDISRIVACPDCHGDRLEPVDSCWGFYGLEACRAEAKTMLATCGHRAA
SIO_010081: SINAC_RS37675
subclass of: SO_0000673
so part of: SINAC_RS37675
location: complement(31046..31621)
location: region:31046-31621:-1
so has part: feature:31046-31621:-1:exon

WP_015250774.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:31046-31621:-1:exon

SINAC_RS37680
type: Gene
subclass of: SO_0000704
RO_0002162: 886293
locus tag: SINAC_RS37680
old locus tag: Sinac_7687
so part of: sequence
location: complement(31624..32121)
location: region:31624-32121:-1
so has part: feature:31624-32121:-1:exon
subclass of: SO_0000010

position:31624:-1
position: 31624
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:32121:-1
position: 32121
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:31624-32121:-1:exon

SINAC_RS37680
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 886293
locus tag: SINAC_RS37680
old locus tag: Sinac_7687
inference: COORDINATES: similar to AA sequence:RefSeq:WP_015250775.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MDDANDDLKITIQSLAVEMSQAFEKAVRPSSGEAFRKLKDVAPDWMRTVCRKAHDDGELLPDDHRYEFIEQAVDALANHDDTDSACESLEPDFYTSGLTGWLHSQNSRVCYISEAMEEYGTFKDGFKLLAAAQMLEREEVFRQVLDALQKELASGEARDDAAGEA
SIO_010081: SINAC_RS37680
subclass of: SO_0000673
so part of: SINAC_RS37680
location: complement(31624..32121)
location: region:31624-32121:-1
so has part: feature:31624-32121:-1:exon

WP_015250775.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:31624-32121:-1:exon