Anas platyrhynchos isolate Z2 breed Pekin duck chromosome 29, ZJU1.0, whole genome shotgun sequence.
type: Entry
definition: Anas platyrhynchos isolate Z2 breed Pekin duck chromosome 29, ZJU1.0, whole genome shotgun sequence.
sequence version: NC_051800.1
sequence date: 2020-12-15
sequence: sequence
division: CON
label: NC_051800.1
type: RefSeq
SIO_000068: refseq
dblink: PRJNA681492
dblink: SAMN15588841
keyword: WGS
keyword: RefSeq
source: Anas platyrhynchos (mallard)
organism: Anas platyrhynchos
taxonomy: Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Galloanserae; Anseriformes; Anatidae; Anatinae; Anas.
comment: REFSEQ INFORMATION: The reference sequence is identical to\nCM027271.1.\nAssembly name: ZJU1.0\nThe genomic sequence for this RefSeq record is from the\nwhole-genome assembly released by the Zhejiang University on\n2020/11/23. The original whole-genome shotgun project has the\naccession JACGAL000000000.1.\n\n##Genome-Assembly-Data-START##\nAssembly Provider :: Zhejiang University\nAssembly Method :: FALCON-Unzip v. git 12072017\nAssembly Name :: ZJU1.0\nGenome Representation :: Full\nExpected Final Version :: No\nGenome Coverage :: 143.0x\nSequencing Technology :: PacBio RSII; PacBio Sequel\n##Genome-Assembly-Data-END##\n\n##Genome-Annotation-Data-START##\nAnnotation Provider :: NCBI\nAnnotation Status :: Full annotation\nAnnotation Name :: Anas platyrhynchos Annotation\n Release 104\nAnnotation Version :: 104\nAnnotation Pipeline :: NCBI eukaryotic genome annotation\n pipeline\nAnnotation Software Version :: 8.5\nAnnotation Method :: Best-placed RefSeq; Gnomon\nFeatures Annotated :: Gene; mRNA; CDS; ncRNA\n##Genome-Annotation-Data-END##

sequence
subclass of: SO_0000340
sequence length: 6031659
topology: linear
so has quality: SO_0000987
location: 1..6031659
location: region:1-6031659:1
RO_0002162: 8839

NC_051800
type: RefSeq
SIO_000068: refseq

PRJNA681492
type: BioProject
SIO_000068: bioproject

SAMN15588841
type: BioSample
SIO_000068: biosample

position:1:1
position: 1
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6031659:1
position: 6031659
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

feature:1-6031659:1:source
so part of: sequence
organism: Anas platyrhynchos
mol type: genomic DNA
isolate: Z2
chromosome: 29
sex: pooled male and female
tissue type: multiple
dev stage: adult
breed: Pekin duck

8839
type: Taxonomy
SIO_000068: taxonomy

LOC101804703
type: Gene
subclass of: SO_0000704
RO_0002162: 8839
gene: LOC101804703
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(8485..24642)
location: region:8485-24642:-1
so has part: feature:8485-24642:-1:exon
subclass of: SO_0000010

101804703
type: Gene
SIO_000068: ncbigene

position:8485:-1
position: 8485
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:24642:-1
position: 24642
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:8485-24642:-1:exon

LOC101804703
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8839
gene: LOC101804703
product: scaffold attachment factor B1, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 126 samples with support for all annotated introns
transcript id: XM_038169278.1
SIO_010081: LOC101804703
subclass of: SO_0000673
so part of: LOC101804703
location: complement(join(8485..8880,9100..9166,9364..9476,10192..10313,11118..11154,11933..12070,12906..13199,13849..13985,14538..14626,15334..15473,16363..16463,16560..16709,17416..17516,18224..18273,18692..19190,20128..20155,20813..20875,21993..22259,22348..22412,23409..23496,24306..24642))
location: region:8485-24642:-1
so has part: feature:24306-24642:-1:exon
so has part: feature:23409-23496:-1:exon
so has part: feature:22348-22412:-1:exon
so has part: feature:21993-22259:-1:exon
so has part: feature:20813-20875:-1:exon
so has part: feature:20128-20155:-1:exon
so has part: feature:18692-19190:-1:exon
so has part: feature:18224-18273:-1:exon
so has part: feature:17416-17516:-1:exon
so has part: feature:16560-16709:-1:exon
so has part: feature:16363-16463:-1:exon
so has part: feature:15334-15473:-1:exon
so has part: feature:14538-14626:-1:exon
so has part: feature:13849-13985:-1:exon
so has part: feature:12906-13199:-1:exon
so has part: feature:11933-12070:-1:exon
so has part: feature:11118-11154:-1:exon
so has part: feature:10192-10313:-1:exon
so has part: feature:9364-9476:-1:exon
so has part: feature:9100-9166:-1:exon
so has part: feature:8485-8880:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:24306-24642:-1:exon

position:24306:-1
position: 24306
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:23409-23496:-1:exon

position:23409:-1
position: 23409
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:23496:-1
position: 23496
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:22348-22412:-1:exon

position:22348:-1
position: 22348
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:22412:-1
position: 22412
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:21993-22259:-1:exon

position:21993:-1
position: 21993
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:22259:-1
position: 22259
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:20813-20875:-1:exon

position:20813:-1
position: 20813
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:20875:-1
position: 20875
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:20128-20155:-1:exon

position:20128:-1
position: 20128
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:20155:-1
position: 20155
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:18692-19190:-1:exon

position:18692:-1
position: 18692
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:19190:-1
position: 19190
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:18224-18273:-1:exon

position:18224:-1
position: 18224
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:18273:-1
position: 18273
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:17416-17516:-1:exon

position:17416:-1
position: 17416
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:17516:-1
position: 17516
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:16560-16709:-1:exon

position:16560:-1
position: 16560
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:16709:-1
position: 16709
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:16363-16463:-1:exon

position:16363:-1
position: 16363
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:16463:-1
position: 16463
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:15334-15473:-1:exon

position:15334:-1
position: 15334
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:15473:-1
position: 15473
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:14538-14626:-1:exon

position:14538:-1
position: 14538
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:14626:-1
position: 14626
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:13849-13985:-1:exon

position:13849:-1
position: 13849
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:13985:-1
position: 13985
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:12906-13199:-1:exon

position:12906:-1
position: 12906
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:13199:-1
position: 13199
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:11933-12070:-1:exon

position:11933:-1
position: 11933
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:12070:-1
position: 12070
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:11118-11154:-1:exon

position:11118:-1
position: 11118
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:11154:-1
position: 11154
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:10192-10313:-1:exon

position:10192:-1
position: 10192
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:10313:-1
position: 10313
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:9364-9476:-1:exon

position:9364:-1
position: 9364
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:9476:-1
position: 9476
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:9100-9166:-1:exon

position:9100:-1
position: 9100
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:9166:-1
position: 9166
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:8485-8880:-1:exon

position:8880:-1
position: 8880
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC101804703
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8839
gene: LOC101804703
product: scaffold attachment factor B1, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 106 samples with support for all annotated introns
transcript id: XM_038169280.1
SIO_010081: LOC101804703
subclass of: SO_0000673
so part of: LOC101804703
location: complement(join(8485..8880,10192..10313,11118..11157,11933..12070,12906..13199,13849..13985,14538..14626,15334..15473,16363..16463,16560..16709,17416..17516,18224..18273,18692..19190,20128..20155,20813..20875,21993..22259,22348..22412,23409..23496,24306..24642))
location: region:8485-24642:-1
so has part: feature:24306-24642:-1:exon
so has part: feature:23409-23496:-1:exon
so has part: feature:22348-22412:-1:exon
so has part: feature:21993-22259:-1:exon
so has part: feature:20813-20875:-1:exon
so has part: feature:20128-20155:-1:exon
so has part: feature:18692-19190:-1:exon
so has part: feature:18224-18273:-1:exon
so has part: feature:17416-17516:-1:exon
so has part: feature:16560-16709:-1:exon
so has part: feature:16363-16463:-1:exon
so has part: feature:15334-15473:-1:exon
so has part: feature:14538-14626:-1:exon
so has part: feature:13849-13985:-1:exon
so has part: feature:12906-13199:-1:exon
so has part: feature:11933-12070:-1:exon
so has part: feature:11118-11157:-1:exon
so has part: feature:10192-10313:-1:exon
so has part: feature:8485-8880:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:24306-24642:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:23409-23496:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:22348-22412:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:21993-22259:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:20813-20875:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:20128-20155:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:18692-19190:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:18224-18273:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:17416-17516:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:16560-16709:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:16363-16463:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:15334-15473:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:14538-14626:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:13849-13985:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:12906-13199:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:11933-12070:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:11118-11157:-1:exon

position:11157:-1
position: 11157
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:10192-10313:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:8485-8880:-1:exon

LOC101804703
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8839
gene: LOC101804703
product: scaffold attachment factor B1, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 106 samples with support for all annotated introns
transcript id: XM_038169279.1
SIO_010081: LOC101804703
subclass of: SO_0000673
so part of: LOC101804703
location: complement(join(8485..8880,9364..9476,10192..10313,11118..11157,11933..12070,12906..13199,13849..13985,14538..14626,15334..15473,16363..16463,16560..16709,17416..17516,18224..18273,18692..19190,20128..20155,20813..20875,21993..22259,22348..22412,23409..23496,24306..24642))
location: region:8485-24642:-1
so has part: feature:24306-24642:-1:exon
so has part: feature:23409-23496:-1:exon
so has part: feature:22348-22412:-1:exon
so has part: feature:21993-22259:-1:exon
so has part: feature:20813-20875:-1:exon
so has part: feature:20128-20155:-1:exon
so has part: feature:18692-19190:-1:exon
so has part: feature:18224-18273:-1:exon
so has part: feature:17416-17516:-1:exon
so has part: feature:16560-16709:-1:exon
so has part: feature:16363-16463:-1:exon
so has part: feature:15334-15473:-1:exon
so has part: feature:14538-14626:-1:exon
so has part: feature:13849-13985:-1:exon
so has part: feature:12906-13199:-1:exon
so has part: feature:11933-12070:-1:exon
so has part: feature:11118-11157:-1:exon
so has part: feature:10192-10313:-1:exon
so has part: feature:9364-9476:-1:exon
so has part: feature:8485-8880:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:24306-24642:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:23409-23496:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:22348-22412:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:21993-22259:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:20813-20875:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:20128-20155:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:18692-19190:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:18224-18273:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:17416-17516:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:16560-16709:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:16363-16463:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:15334-15473:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:14538-14626:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:13849-13985:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:12906-13199:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:11933-12070:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:11118-11157:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:10192-10313:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:9364-9476:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:8485-8880:-1:exon

LOC101804703
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8839
gene: LOC101804703
product: scaffold attachment factor B1, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 11 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 126 samples with support for all annotated introns
transcript id: XM_038169277.1
SIO_010081: LOC101804703
subclass of: SO_0000673
so part of: LOC101804703
location: complement(join(8485..8880,9100..9166,9364..9476,10192..10313,11118..11157,11933..12070,12906..13199,13849..13985,14538..14626,15334..15473,16363..16463,16560..16709,17416..17516,18224..18273,18692..19190,20128..20155,20813..20875,21993..22259,22348..22412,23409..23496,24306..24642))
location: region:8485-24642:-1
so has part: feature:24306-24642:-1:exon
so has part: feature:23409-23496:-1:exon
so has part: feature:22348-22412:-1:exon
so has part: feature:21993-22259:-1:exon
so has part: feature:20813-20875:-1:exon
so has part: feature:20128-20155:-1:exon
so has part: feature:18692-19190:-1:exon
so has part: feature:18224-18273:-1:exon
so has part: feature:17416-17516:-1:exon
so has part: feature:16560-16709:-1:exon
so has part: feature:16363-16463:-1:exon
so has part: feature:15334-15473:-1:exon
so has part: feature:14538-14626:-1:exon
so has part: feature:13849-13985:-1:exon
so has part: feature:12906-13199:-1:exon
so has part: feature:11933-12070:-1:exon
so has part: feature:11118-11157:-1:exon
so has part: feature:10192-10313:-1:exon
so has part: feature:9364-9476:-1:exon
so has part: feature:9100-9166:-1:exon
so has part: feature:8485-8880:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:24306-24642:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:23409-23496:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:22348-22412:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:21993-22259:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:20813-20875:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:20128-20155:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:18692-19190:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:18224-18273:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:17416-17516:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:16560-16709:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:16363-16463:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:15334-15473:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:14538-14626:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:13849-13985:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:12906-13199:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:11933-12070:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:11118-11157:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:10192-10313:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:9364-9476:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:9100-9166:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:8485-8880:-1:exon

LOC101804703
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8839
gene: LOC101804703
product: scaffold attachment factor B1, transcript variant X6
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 120 samples with support for all annotated introns
transcript id: XM_038169282.1
SIO_010081: LOC101804703
subclass of: SO_0000673
so part of: LOC101804703
location: complement(join(8485..8880,9100..9166,9364..9476,10192..10313,11118..11157,11933..12070,12906..13199,13849..13985,14538..14626,15334..15473,16363..16463,16560..16709,17416..17516,18224..18273,18692..19190,20128..20155,20813..20875,21993..22259,22348..22412,23409..23496,24103..24299))
location: region:8485-24299:-1
so has part: feature:24103-24299:-1:exon
so has part: feature:23409-23496:-1:exon
so has part: feature:22348-22412:-1:exon
so has part: feature:21993-22259:-1:exon
so has part: feature:20813-20875:-1:exon
so has part: feature:20128-20155:-1:exon
so has part: feature:18692-19190:-1:exon
so has part: feature:18224-18273:-1:exon
so has part: feature:17416-17516:-1:exon
so has part: feature:16560-16709:-1:exon
so has part: feature:16363-16463:-1:exon
so has part: feature:15334-15473:-1:exon
so has part: feature:14538-14626:-1:exon
so has part: feature:13849-13985:-1:exon
so has part: feature:12906-13199:-1:exon
so has part: feature:11933-12070:-1:exon
so has part: feature:11118-11157:-1:exon
so has part: feature:10192-10313:-1:exon
so has part: feature:9364-9476:-1:exon
so has part: feature:9100-9166:-1:exon
so has part: feature:8485-8880:-1:exon

position:24299:-1
position: 24299
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:24103-24299:-1:exon

position:24103:-1
position: 24103
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:23409-23496:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:22348-22412:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:21993-22259:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:20813-20875:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:20128-20155:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:18692-19190:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:18224-18273:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:17416-17516:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:16560-16709:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:16363-16463:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:15334-15473:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:14538-14626:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:13849-13985:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:12906-13199:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:11933-12070:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:11118-11157:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:10192-10313:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:9364-9476:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:9100-9166:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:8485-8880:-1:exon

LOC101804703
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8839
gene: LOC101804703
product: scaffold attachment factor B1, transcript variant X7
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 93 samples with support for all annotated introns
transcript id: XM_038169283.1
SIO_010081: LOC101804703
subclass of: SO_0000673
so part of: LOC101804703
location: complement(join(8485..8880,9100..9166,9364..9476,10192..10313,11118..11157,11933..12070,12906..13199,13849..13985,14538..14626,15334..15473,16363..16463,16560..16709,17416..17516,18224..18273,18692..19190,20128..20155,20813..20875,21993..22259,22348..22412,23409..23496,23954..24016))
location: region:8485-24016:-1
so has part: feature:23954-24016:-1:exon
so has part: feature:23409-23496:-1:exon
so has part: feature:22348-22412:-1:exon
so has part: feature:21993-22259:-1:exon
so has part: feature:20813-20875:-1:exon
so has part: feature:20128-20155:-1:exon
so has part: feature:18692-19190:-1:exon
so has part: feature:18224-18273:-1:exon
so has part: feature:17416-17516:-1:exon
so has part: feature:16560-16709:-1:exon
so has part: feature:16363-16463:-1:exon
so has part: feature:15334-15473:-1:exon
so has part: feature:14538-14626:-1:exon
so has part: feature:13849-13985:-1:exon
so has part: feature:12906-13199:-1:exon
so has part: feature:11933-12070:-1:exon
so has part: feature:11118-11157:-1:exon
so has part: feature:10192-10313:-1:exon
so has part: feature:9364-9476:-1:exon
so has part: feature:9100-9166:-1:exon
so has part: feature:8485-8880:-1:exon

position:24016:-1
position: 24016
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:23954-24016:-1:exon

position:23954:-1
position: 23954
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:23409-23496:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:22348-22412:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:21993-22259:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:20813-20875:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:20128-20155:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:18692-19190:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:18224-18273:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:17416-17516:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:16560-16709:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:16363-16463:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:15334-15473:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:14538-14626:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:13849-13985:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:12906-13199:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:11933-12070:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:11118-11157:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:10192-10313:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:9364-9476:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:9100-9166:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:8485-8880:-1:exon

LOC101804703
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8839
gene: LOC101804703
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: scaffold attachment factor B1 isoform X2
translation: MAESQPAAGQGEPVAPGGPGGPSSEPETRRLSELRVIDLRAELRRRNLDSGGNKSVLTERLRKAIEEEGGNPDEIPVVSETVNKKTSKRSSKGRRPDEEGVEDNGLEEDSGDGQEDIEASLDNLQDIDMMDISVLDEAEIDNGNAVDCSADNVLDSLSDSRENADAETKELPDQPTAYAVRNVEASLQFSEIKEESREIPVAMVEAEDVGNSFNAASSDLTVIKETEELPLEPENEKILDILGETCKSELLNEETSEVEQPHAQEASNVVPGKRLAEEEDVLAAAQLEEDALDLDSKSAQAMSRKEAKHLVVAKGERSEQTIEEEKLDSESLVLETLSDQSSKRFQGLEASSGETAEKGAGPEGKDSKEDAKKTEDKANSEESPATRESSTSEGGDQKKSPVEEDRDTKIISRDEKGRAGSGSGRNLWVSGLSSSTRATDLKNLFSKYGKVVGAKVVTNARSPGARCYGFVTMSTSEEATKCISHLHRTELHGKMISVEKAKNEPAGKKPADKKEGEARKEKDRHHSADCKSEKSVGIKKEEKTDKKDDAKKSEKDGKDEGKEKDDQKAGPSDRSRASKSASRGTERTVVMDKSKGEPVISVKTSASKERSTKSQDRKSESKEKQDILSFDKIKEQRERERQRQREREIRETERRRERERREREQRLQAIHERDERQRLQRERERLEFQRQRLDRERLERERLERERMHIEQERRREQERIQREREELRRQQEQLRYEQERRSAMRRPYDPDGRRDDPYWPEAKRMAMDDRYHSEFGRQDRFHDFDHRDRGRYQDHSLDREGSRGIPDRDGQHYPDERHGGPDRHSRDSRDSWGGYGSDRRMNEGRGIPPQTRDGRDWGDHGRKLEGHQDRSWQGNVDGGMMGRDHERWQGGDRSMPGQSGPGHVMNRGGIPGRGGFTQGGNQSQMMQSGGIQGGFAGQERTNRLTESRFTRRY
SIO_010081: LOC101804703
subclass of: SO_0000673
so part of: LOC101804703
location: complement(join(8754..8880,9100..9166,9364..9476,10192..10313,11118..11154,11933..12070,12906..13199,13849..13985,14538..14626,15334..15473,16363..16463,16560..16709,17416..17516,18224..18273,18692..19190,20128..20155,20813..20875,21993..22259,22348..22412,23409..23496,24306..24494))
location: region:8754-24494:-1
so has part: feature:24306-24494:-1:exon
so has part: feature:23409-23496:-1:exon
so has part: feature:22348-22412:-1:exon
so has part: feature:21993-22259:-1:exon
so has part: feature:20813-20875:-1:exon
so has part: feature:20128-20155:-1:exon
so has part: feature:18692-19190:-1:exon
so has part: feature:18224-18273:-1:exon
so has part: feature:17416-17516:-1:exon
so has part: feature:16560-16709:-1:exon
so has part: feature:16363-16463:-1:exon
so has part: feature:15334-15473:-1:exon
so has part: feature:14538-14626:-1:exon
so has part: feature:13849-13985:-1:exon
so has part: feature:12906-13199:-1:exon
so has part: feature:11933-12070:-1:exon
so has part: feature:11118-11154:-1:exon
so has part: feature:10192-10313:-1:exon
so has part: feature:9364-9476:-1:exon
so has part: feature:9100-9166:-1:exon
so has part: feature:8754-8880:-1:exon

XP_038025206.1
type: Protein
SIO_000068: ncbiprotein

position:8754:-1
position: 8754
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:24494:-1
position: 24494
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:24306-24494:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:23409-23496:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:22348-22412:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:21993-22259:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:20813-20875:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:20128-20155:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:18692-19190:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:18224-18273:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:17416-17516:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:16560-16709:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:16363-16463:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:15334-15473:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:14538-14626:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:13849-13985:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:12906-13199:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:11933-12070:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:11118-11154:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:10192-10313:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:9364-9476:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:9100-9166:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:8754-8880:-1:exon

LOC101804703
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8839
gene: LOC101804703
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: scaffold attachment factor B1 isoform X4
translation: MAESQPAAGQGEPVAPGGPGGPSSEPETRRLSELRVIDLRAELRRRNLDSGGNKSVLTERLRKAIEEEGGNPDEIPVVSETVNKKTSKRSSKGRRPDEEGVEDNGLEEDSGDGQEDIEASLDNLQDIDMMDISVLDEAEIDNGNAVDCSADNVLDSLSDSRENADAETKELPDQPTAYAVRNVEASLQFSEIKEESREIPVAMVEAEDVGNSFNAASSDLTVIKETEELPLEPENEKILDILGETCKSELLNEETSEVEQPHAQEASNVVPGKRLAEEEDVLAAAQLEEDALDLDSKSAQAMSRKEAKHLVVAKGERSEQTIEEEKLDSESLVLETLSDQSSKRFQGLEASSGETAEKGAGPEGKDSKEDAKKTEDKANSEESPATRESSTSEGGDQKKSPVEEDRDTKIISRDEKGRAGSGSGRNLWVSGLSSSTRATDLKNLFSKYGKVVGAKVVTNARSPGARCYGFVTMSTSEEATKCISHLHRTELHGKMISVEKAKNEPAGKKPADKKEGEARKEKDRHHSADCKSEKSVGIKKEEKTDKKDDAKKSEKDGKDEGKEKDDQKAGPSDRSRASKSASRGTERTVVMDKSKGEPVISVKTSASKERSTKSQDRKSESKEKQDILSFDKIKEQRERERQRQREREIRETERRRERERREREQRLQAIHERDERQRLQRERERLEFQRQRLDRERLERERLERERMHIEQERRREQERIQREREELRRQQEQLRYEQERRSAMRRPYDPDGRRDDPYWPEAKRMAMDDRYHSEFGRQDRFHDFDHRDRGRYQDHSLDRREGSRGIPDRDGQHYPDERHGGPDRHSRDSRDSWGGYGSDRRMNEGRGIPPQTRRGGFTQGGNQSQMMQSGGIQGGFAGQERTNRLTESRFTRRY
SIO_010081: LOC101804703
subclass of: SO_0000673
so part of: LOC101804703
location: complement(join(8754..8880,10192..10313,11118..11157,11933..12070,12906..13199,13849..13985,14538..14626,15334..15473,16363..16463,16560..16709,17416..17516,18224..18273,18692..19190,20128..20155,20813..20875,21993..22259,22348..22412,23409..23496,24306..24494))
location: region:8754-24494:-1
so has part: feature:24306-24494:-1:exon
so has part: feature:23409-23496:-1:exon
so has part: feature:22348-22412:-1:exon
so has part: feature:21993-22259:-1:exon
so has part: feature:20813-20875:-1:exon
so has part: feature:20128-20155:-1:exon
so has part: feature:18692-19190:-1:exon
so has part: feature:18224-18273:-1:exon
so has part: feature:17416-17516:-1:exon
so has part: feature:16560-16709:-1:exon
so has part: feature:16363-16463:-1:exon
so has part: feature:15334-15473:-1:exon
so has part: feature:14538-14626:-1:exon
so has part: feature:13849-13985:-1:exon
so has part: feature:12906-13199:-1:exon
so has part: feature:11933-12070:-1:exon
so has part: feature:11118-11157:-1:exon
so has part: feature:10192-10313:-1:exon
so has part: feature:8754-8880:-1:exon

XP_038025208.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:24306-24494:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:23409-23496:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:22348-22412:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:21993-22259:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:20813-20875:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:20128-20155:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:18692-19190:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:18224-18273:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:17416-17516:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:16560-16709:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:16363-16463:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:15334-15473:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:14538-14626:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:13849-13985:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:12906-13199:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:11933-12070:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:11118-11157:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:10192-10313:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:8754-8880:-1:exon

LOC101804703
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8839
gene: LOC101804703
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: scaffold attachment factor B1 isoform X1
translation: MAESQPAAGQGEPVAPGGPGGPSSEPETRRLSELRVIDLRAELRRRNLDSGGNKSVLTERLRKAIEEEGGNPDEIPVVSETVNKKTSKRSSKGRRPDEEGVEDNGLEEDSGDGQEDIEASLDNLQDIDMMDISVLDEAEIDNGNAVDCSADNVLDSLSDSRENADAETKELPDQPTAYAVRNVEASLQFSEIKEESREIPVAMVEAEDVGNSFNAASSDLTVIKETEELPLEPENEKILDILGETCKSELLNEETSEVEQPHAQEASNVVPGKRLAEEEDVLAAAQLEEDALDLDSKSAQAMSRKEAKHLVVAKGERSEQTIEEEKLDSESLVLETLSDQSSKRFQGLEASSGETAEKGAGPEGKDSKEDAKKTEDKANSEESPATRESSTSEGGDQKKSPVEEDRDTKIISRDEKGRAGSGSGRNLWVSGLSSSTRATDLKNLFSKYGKVVGAKVVTNARSPGARCYGFVTMSTSEEATKCISHLHRTELHGKMISVEKAKNEPAGKKPADKKEGEARKEKDRHHSADCKSEKSVGIKKEEKTDKKDDAKKSEKDGKDEGKEKDDQKAGPSDRSRASKSASRGTERTVVMDKSKGEPVISVKTSASKERSTKSQDRKSESKEKQDILSFDKIKEQRERERQRQREREIRETERRRERERREREQRLQAIHERDERQRLQRERERLEFQRQRLDRERLERERLERERMHIEQERRREQERIQREREELRRQQEQLRYEQERRSAMRRPYDPDGRRDDPYWPEAKRMAMDDRYHSEFGRQDRFHDFDHRDRGRYQDHSLDRREGSRGIPDRDGQHYPDERHGGPDRHSRDSRDSWGGYGSDRRMNEGRGIPPQTRDGRDWGDHGRKLEGHQDRSWQGNVDGGMMGRDHERWQGGDRSMPGQSGPGHVMNRGGIPGRGGFTQGGNQSQMMQSGGIQGGFAGQERTNRLTESRFTRRY
SIO_010081: LOC101804703
subclass of: SO_0000673
so part of: LOC101804703
location: complement(join(8754..8880,9100..9166,9364..9476,10192..10313,11118..11157,11933..12070,12906..13199,13849..13985,14538..14626,15334..15473,16363..16463,16560..16709,17416..17516,18224..18273,18692..19190,20128..20155,20813..20875,21993..22259,22348..22412,23409..23496,24306..24494))
location: region:8754-24494:-1
so has part: feature:24306-24494:-1:exon
so has part: feature:23409-23496:-1:exon
so has part: feature:22348-22412:-1:exon
so has part: feature:21993-22259:-1:exon
so has part: feature:20813-20875:-1:exon
so has part: feature:20128-20155:-1:exon
so has part: feature:18692-19190:-1:exon
so has part: feature:18224-18273:-1:exon
so has part: feature:17416-17516:-1:exon
so has part: feature:16560-16709:-1:exon
so has part: feature:16363-16463:-1:exon
so has part: feature:15334-15473:-1:exon
so has part: feature:14538-14626:-1:exon
so has part: feature:13849-13985:-1:exon
so has part: feature:12906-13199:-1:exon
so has part: feature:11933-12070:-1:exon
so has part: feature:11118-11157:-1:exon
so has part: feature:10192-10313:-1:exon
so has part: feature:9364-9476:-1:exon
so has part: feature:9100-9166:-1:exon
so has part: feature:8754-8880:-1:exon

XP_038025205.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:24306-24494:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:23409-23496:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:22348-22412:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:21993-22259:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:20813-20875:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:20128-20155:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:18692-19190:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:18224-18273:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:17416-17516:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:16560-16709:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:16363-16463:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:15334-15473:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:14538-14626:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:13849-13985:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:12906-13199:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:11933-12070:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:11118-11157:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:10192-10313:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:9364-9476:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:9100-9166:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:8754-8880:-1:exon

LOC101804703
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8839
gene: LOC101804703
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: scaffold attachment factor B2 isoform X5
translation: MMDISVLDEAEIDNGNAVDCSADNVLDSLSDSRENADAETKELPDQPTAYAVRNVEASLQFSEIKEESREIPVAMVEAEDVGNSFNAASSDLTVIKETEELPLEPENEKILDILGETCKSELLNEETSEVEQPHAQEASNVVPGKRLAEEEDVLAAAQLEEDALDLDSKSAQAMSRKEAKHLVVAKGERSEQTIEEEKLDSESLVLETLSDQSSKRFQGLEASSGETAEKGAGPEGKDSKEDAKKTEDKANSEESPATRESSTSEGGDQKKSPVEEDRDTKIISRDEKGRAGSGSGRNLWVSGLSSSTRATDLKNLFSKYGKVVGAKVVTNARSPGARCYGFVTMSTSEEATKCISHLHRTELHGKMISVEKAKNEPAGKKPADKKEGEARKEKDRHHSADCKSEKSVGIKKEEKTDKKDDAKKSEKDGKDEGKEKDDQKAGPSDRSRASKSASRGTERTVVMDKSKGEPVISVKTSASKERSTKSQDRKSESKEKQDILSFDKIKEQRERERQRQREREIRETERRRERERREREQRLQAIHERDERQRLQRERERLEFQRQRLDRERLERERLERERMHIEQERRREQERIQREREELRRQQEQLRYEQERRSAMRRPYDPDGRRDDPYWPEAKRMAMDDRYHSEFGRQDRFHDFDHRDRGRYQDHSLDRREGSRGIPDRDGQHYPDERHGGPDRHSRDSRDSWGGYGSDRRMNEGRGIPPQTRDGRDWGDHGRKLEGHQDRSWQGNVDGGMMGRDHERWQGGDRSMPGQSGPGHVMNRGGIPGRGGFTQGGNQSQMMQSGGIQGGFAGQERTNRLTESRFTRRY
SIO_010081: LOC101804703
subclass of: SO_0000673
so part of: LOC101804703
location: complement(join(8754..8880,9100..9166,9364..9476,10192..10313,11118..11157,11933..12070,12906..13199,13849..13985,14538..14626,15334..15473,16363..16463,16560..16709,17416..17516,18224..18273,18692..19190,20128..20155,20813..20875,21993..22217))
location: region:8754-22217:-1
so has part: feature:21993-22217:-1:exon
so has part: feature:20813-20875:-1:exon
so has part: feature:20128-20155:-1:exon
so has part: feature:18692-19190:-1:exon
so has part: feature:18224-18273:-1:exon
so has part: feature:17416-17516:-1:exon
so has part: feature:16560-16709:-1:exon
so has part: feature:16363-16463:-1:exon
so has part: feature:15334-15473:-1:exon
so has part: feature:14538-14626:-1:exon
so has part: feature:13849-13985:-1:exon
so has part: feature:12906-13199:-1:exon
so has part: feature:11933-12070:-1:exon
so has part: feature:11118-11157:-1:exon
so has part: feature:10192-10313:-1:exon
so has part: feature:9364-9476:-1:exon
so has part: feature:9100-9166:-1:exon
so has part: feature:8754-8880:-1:exon

XP_038025210.1
type: Protein
SIO_000068: ncbiprotein

position:22217:-1
position: 22217
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:21993-22217:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:20813-20875:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:20128-20155:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:18692-19190:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:18224-18273:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:17416-17516:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:16560-16709:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:16363-16463:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:15334-15473:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:14538-14626:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:13849-13985:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:12906-13199:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:11933-12070:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:11118-11157:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:10192-10313:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:9364-9476:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:9100-9166:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:8754-8880:-1:exon

LOC101804703
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8839
gene: LOC101804703
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: scaffold attachment factor B2 isoform X5
translation: MMDISVLDEAEIDNGNAVDCSADNVLDSLSDSRENADAETKELPDQPTAYAVRNVEASLQFSEIKEESREIPVAMVEAEDVGNSFNAASSDLTVIKETEELPLEPENEKILDILGETCKSELLNEETSEVEQPHAQEASNVVPGKRLAEEEDVLAAAQLEEDALDLDSKSAQAMSRKEAKHLVVAKGERSEQTIEEEKLDSESLVLETLSDQSSKRFQGLEASSGETAEKGAGPEGKDSKEDAKKTEDKANSEESPATRESSTSEGGDQKKSPVEEDRDTKIISRDEKGRAGSGSGRNLWVSGLSSSTRATDLKNLFSKYGKVVGAKVVTNARSPGARCYGFVTMSTSEEATKCISHLHRTELHGKMISVEKAKNEPAGKKPADKKEGEARKEKDRHHSADCKSEKSVGIKKEEKTDKKDDAKKSEKDGKDEGKEKDDQKAGPSDRSRASKSASRGTERTVVMDKSKGEPVISVKTSASKERSTKSQDRKSESKEKQDILSFDKIKEQRERERQRQREREIRETERRRERERREREQRLQAIHERDERQRLQRERERLEFQRQRLDRERLERERLERERMHIEQERRREQERIQREREELRRQQEQLRYEQERRSAMRRPYDPDGRRDDPYWPEAKRMAMDDRYHSEFGRQDRFHDFDHRDRGRYQDHSLDRREGSRGIPDRDGQHYPDERHGGPDRHSRDSRDSWGGYGSDRRMNEGRGIPPQTRDGRDWGDHGRKLEGHQDRSWQGNVDGGMMGRDHERWQGGDRSMPGQSGPGHVMNRGGIPGRGGFTQGGNQSQMMQSGGIQGGFAGQERTNRLTESRFTRRY
SIO_010081: LOC101804703
subclass of: SO_0000673
so part of: LOC101804703
location: complement(join(8754..8880,9100..9166,9364..9476,10192..10313,11118..11157,11933..12070,12906..13199,13849..13985,14538..14626,15334..15473,16363..16463,16560..16709,17416..17516,18224..18273,18692..19190,20128..20155,20813..20875,21993..22217))
location: region:8754-22217:-1
so has part: feature:21993-22217:-1:exon
so has part: feature:20813-20875:-1:exon
so has part: feature:20128-20155:-1:exon
so has part: feature:18692-19190:-1:exon
so has part: feature:18224-18273:-1:exon
so has part: feature:17416-17516:-1:exon
so has part: feature:16560-16709:-1:exon
so has part: feature:16363-16463:-1:exon
so has part: feature:15334-15473:-1:exon
so has part: feature:14538-14626:-1:exon
so has part: feature:13849-13985:-1:exon
so has part: feature:12906-13199:-1:exon
so has part: feature:11933-12070:-1:exon
so has part: feature:11118-11157:-1:exon
so has part: feature:10192-10313:-1:exon
so has part: feature:9364-9476:-1:exon
so has part: feature:9100-9166:-1:exon
so has part: feature:8754-8880:-1:exon

XP_038025211.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:21993-22217:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:20813-20875:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:20128-20155:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:18692-19190:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:18224-18273:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:17416-17516:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:16560-16709:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:16363-16463:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:15334-15473:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:14538-14626:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:13849-13985:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:12906-13199:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:11933-12070:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:11118-11157:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:10192-10313:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:9364-9476:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:9100-9166:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:8754-8880:-1:exon

LOC101804703
type: Miscellaneous RNA
subclass of: SO_0000673
RO_0002162: 8839
gene: LOC101804703
product: scaffold attachment factor B1, transcript variant X5
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 126 samples with support for all annotated introns
transcript id: XR_005261326.1
SIO_010081: LOC101804703
so part of: LOC101804703
location: complement(join(8797..8880,9100..9166,10192..10313,11118..11157,11933..12070,12906..13199,13849..13985,14538..14626,15334..15473,16363..16463,16560..16709,17416..17516,18224..18273,18692..19190,20128..20155,20813..20875,21993..22259,22348..22412,23409..23496,24306..24642))
location: region:8797-24642:-1
so has part: feature:24306-24642:-1:exon
so has part: feature:23409-23496:-1:exon
so has part: feature:22348-22412:-1:exon
so has part: feature:21993-22259:-1:exon
so has part: feature:20813-20875:-1:exon
so has part: feature:20128-20155:-1:exon
so has part: feature:18692-19190:-1:exon
so has part: feature:18224-18273:-1:exon
so has part: feature:17416-17516:-1:exon
so has part: feature:16560-16709:-1:exon
so has part: feature:16363-16463:-1:exon
so has part: feature:15334-15473:-1:exon
so has part: feature:14538-14626:-1:exon
so has part: feature:13849-13985:-1:exon
so has part: feature:12906-13199:-1:exon
so has part: feature:11933-12070:-1:exon
so has part: feature:11118-11157:-1:exon
so has part: feature:10192-10313:-1:exon
so has part: feature:9100-9166:-1:exon
so has part: feature:8797-8880:-1:exon

position:8797:-1
position: 8797
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:24306-24642:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:23409-23496:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:22348-22412:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:21993-22259:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:20813-20875:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:20128-20155:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:18692-19190:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:18224-18273:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:17416-17516:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:16560-16709:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:16363-16463:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:15334-15473:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:14538-14626:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:13849-13985:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:12906-13199:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:11933-12070:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:11118-11157:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:10192-10313:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:9100-9166:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:8797-8880:-1:exon

LOC101804703
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8839
gene: LOC101804703
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: scaffold attachment factor B1 isoform X3
translation: MAESQPAAGQGEPVAPGGPGGPSSEPETRRLSELRVIDLRAELRRRNLDSGGNKSVLTERLRKAIEEEGGNPDEIPVVSETVNKKTSKRSSKGRRPDEEGVEDNGLEEDSGDGQEDIEASLDNLQDIDMMDISVLDEAEIDNGNAVDCSADNVLDSLSDSRENADAETKELPDQPTAYAVRNVEASLQFSEIKEESREIPVAMVEAEDVGNSFNAASSDLTVIKETEELPLEPENEKILDILGETCKSELLNEETSEVEQPHAQEASNVVPGKRLAEEEDVLAAAQLEEDALDLDSKSAQAMSRKEAKHLVVAKGERSEQTIEEEKLDSESLVLETLSDQSSKRFQGLEASSGETAEKGAGPEGKDSKEDAKKTEDKANSEESPATRESSTSEGGDQKKSPVEEDRDTKIISRDEKGRAGSGSGRNLWVSGLSSSTRATDLKNLFSKYGKVVGAKVVTNARSPGARCYGFVTMSTSEEATKCISHLHRTELHGKMISVEKAKNEPAGKKPADKKEGEARKEKDRHHSADCKSEKSVGIKKEEKTDKKDDAKKSEKDGKDEGKEKDDQKAGPSDRSRASKSASRGTERTVVMDKSKGEPVISVKTSASKERSTKSQDRKSESKEKQDILSFDKIKEQRERERQRQREREIRETERRRERERREREQRLQAIHERDERQRLQRERERLEFQRQRLDRERLERERLERERMHIEQERRREQERIQREREELRRQQEQLRYEQERRSAMRRPYDPDGRRDDPYWPEAKRMAMDDRYHSEFGRQDRFHDFDHRDRGRYQDHSLDRREGSRGIPDRDGQHYPDERHGGPDRHSRDSRDSWGGYGSDRRMNEGRGIPPQTRDGRDWGDHGRKLEGHQDRSWQGNVDGGMMGRDHERWQGVEASHKVETRAR
SIO_010081: LOC101804703
subclass of: SO_0000673
so part of: LOC101804703
location: complement(join(8840..8880,9364..9476,10192..10313,11118..11157,11933..12070,12906..13199,13849..13985,14538..14626,15334..15473,16363..16463,16560..16709,17416..17516,18224..18273,18692..19190,20128..20155,20813..20875,21993..22259,22348..22412,23409..23496,24306..24494))
location: region:8840-24494:-1
so has part: feature:24306-24494:-1:exon
so has part: feature:23409-23496:-1:exon
so has part: feature:22348-22412:-1:exon
so has part: feature:21993-22259:-1:exon
so has part: feature:20813-20875:-1:exon
so has part: feature:20128-20155:-1:exon
so has part: feature:18692-19190:-1:exon
so has part: feature:18224-18273:-1:exon
so has part: feature:17416-17516:-1:exon
so has part: feature:16560-16709:-1:exon
so has part: feature:16363-16463:-1:exon
so has part: feature:15334-15473:-1:exon
so has part: feature:14538-14626:-1:exon
so has part: feature:13849-13985:-1:exon
so has part: feature:12906-13199:-1:exon
so has part: feature:11933-12070:-1:exon
so has part: feature:11118-11157:-1:exon
so has part: feature:10192-10313:-1:exon
so has part: feature:9364-9476:-1:exon
so has part: feature:8840-8880:-1:exon

XP_038025207.1
type: Protein
SIO_000068: ncbiprotein

position:8840:-1
position: 8840
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:24306-24494:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:23409-23496:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:22348-22412:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:21993-22259:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:20813-20875:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:20128-20155:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:18692-19190:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:18224-18273:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:17416-17516:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:16560-16709:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:16363-16463:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:15334-15473:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:14538-14626:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:13849-13985:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:12906-13199:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:11933-12070:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:11118-11157:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:10192-10313:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:9364-9476:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:8840-8880:-1:exon

LOC101803767
type: Gene
subclass of: SO_0000704
RO_0002162: 8839
gene: LOC101803767
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 24882..41971
location: region:24882-41971:1
so has part: feature:24882-41971:1:exon
subclass of: SO_0000010

101803767
type: Gene
SIO_000068: ncbigene

position:24882:1
position: 24882
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:41971:1
position: 41971
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:24882-41971:1:exon

LOC101803767
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8839
gene: LOC101803767
product: scaffold attachment factor B1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 126 samples with support for all annotated introns
transcript id: XM_027472551.2
SIO_010081: LOC101803767
subclass of: SO_0000673
so part of: LOC101803767
location: join(24882..25215,26022..26106,27608..27672,27758..27964,28663..28725,29381..29408,30307..30805,31228..31277,33545..33645,34663..34812,34905..34981,35963..36102,36440..36531,36916..37022,37643..37936,38217..38354,38876..38918,40177..40298,41038..41150,41270..41321,41606..41971)
location: region:24882-41971:1
so has part: feature:24882-25215:1:exon
so has part: feature:26022-26106:1:exon
so has part: feature:27608-27672:1:exon
so has part: feature:27758-27964:1:exon
so has part: feature:28663-28725:1:exon
so has part: feature:29381-29408:1:exon
so has part: feature:30307-30805:1:exon
so has part: feature:31228-31277:1:exon
so has part: feature:33545-33645:1:exon
so has part: feature:34663-34812:1:exon
so has part: feature:34905-34981:1:exon
so has part: feature:35963-36102:1:exon
so has part: feature:36440-36531:1:exon
so has part: feature:36916-37022:1:exon
so has part: feature:37643-37936:1:exon
so has part: feature:38217-38354:1:exon
so has part: feature:38876-38918:1:exon
so has part: feature:40177-40298:1:exon
so has part: feature:41038-41150:1:exon
so has part: feature:41270-41321:1:exon
so has part: feature:41606-41971:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:24882-25215:1:exon

position:25215:1
position: 25215
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:26022-26106:1:exon

position:26022:1
position: 26022
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:26106:1
position: 26106
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:27608-27672:1:exon

position:27608:1
position: 27608
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:27672:1
position: 27672
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:27758-27964:1:exon

position:27758:1
position: 27758
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:27964:1
position: 27964
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:28663-28725:1:exon

position:28663:1
position: 28663
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:28725:1
position: 28725
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:29381-29408:1:exon

position:29381:1
position: 29381
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:29408:1
position: 29408
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:30307-30805:1:exon

position:30307:1
position: 30307
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:30805:1
position: 30805
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:31228-31277:1:exon

position:31228:1
position: 31228
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:31277:1
position: 31277
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:33545-33645:1:exon

position:33545:1
position: 33545
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:33645:1
position: 33645
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:34663-34812:1:exon

position:34663:1
position: 34663
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:34812:1
position: 34812
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:34905-34981:1:exon

position:34905:1
position: 34905
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:34981:1
position: 34981
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:35963-36102:1:exon

position:35963:1
position: 35963
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:36102:1
position: 36102
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:36440-36531:1:exon

position:36440:1
position: 36440
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:36531:1
position: 36531
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:36916-37022:1:exon

position:36916:1
position: 36916
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:37022:1
position: 37022
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:37643-37936:1:exon

position:37643:1
position: 37643
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:37936:1
position: 37936
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:38217-38354:1:exon

position:38217:1
position: 38217
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:38354:1
position: 38354
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:38876-38918:1:exon

position:38876:1
position: 38876
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:38918:1
position: 38918
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:40177-40298:1:exon

position:40177:1
position: 40177
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:40298:1
position: 40298
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:41038-41150:1:exon

position:41038:1
position: 41038
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:41150:1
position: 41150
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:41270-41321:1:exon

position:41270:1
position: 41270
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:41321:1
position: 41321
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:41606-41971:1:exon

position:41606:1
position: 41606
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC101803767
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8839
gene: LOC101803767
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: scaffold attachment factor B1
translation: MAESQPAAGLGDLTTLGGAPALGSEPETRRLSELRVIDLRAELKRRNLDSGGNKSVLTERLRKAIEDEGGDPDEIPVTSELTKRMPKRTSKGRKPEEEGAEDNGLEENSRDGQEDIEASLDTLQDIDMMDISVLDEAEIDNSSAVDCGEDYSPDNILDSLSDNKDNVDAEMKELPDQLTENEEDYDEIENNVDSSSSDLIEMKKTEKLHLEPENEKILDILGETCKSELLNEETSEVEQPHAQEASNVVPGKRLAEEEDVLAAAQLEEDALDLDSKSAQAMSRKEAKRLVVAKGERSEQTIEEEKLDSESLVLETLSDQSSKRFQGLEASSGETAEKGAGPEGKDSKEDAKKTEDKANSEESPATRESSTSEGGDQKKSPVEEDRDTKIISKDEKGRTSSSSGRNFWVSGLASTTRATDLKNLFSKYGKVVGAKVVTNARSPGARCYGFVTMSTAEEATKCITHLHKTELHGKIISVEKAKNEPAGKKPTEKKENEVKKETVSERPGSIKRDDKSDQKDDSKKTEDKDEKEKKDKDELKPGSSDQPKTNKSGSKGTERTVVMDKSKGEPVISVKTSTASKDRSIKSQDRKSESRERQGIVPFDKIKAQRKMREAEQRRTRERRERQQHLQTIREREERERLEIARERLEIERQRLERERMERERLERERMHIEHERRREQDRIQREREELRRQHEQLRYEQERRSAMRRPYDIDGRRDDPYWPEAKRMAMNDRYHSDFGRQDRFHDFDHRDRGRYQDHSIDRRDGSRTMMGDRDGQHYPDERHGGPDRHSRDSRESWGSYGSDRRMSESRGIPPQSRDGRDWGDHGRKFEGHQDRSWQSSVDGGMIGRDHERWQGGGRGRPGHVMHRGGMSGRGGFIQGGNQSQMMHGGGMQGEGFAGQERASRPNDPRFNRRY
SIO_010081: LOC101803767
subclass of: SO_0000673
so part of: LOC101803767
location: join(25027..25215,26022..26106,27608..27672,27758..27964,28663..28725,29381..29408,30307..30805,31228..31277,33545..33645,34663..34812,34905..34981,35963..36102,36440..36531,36916..37022,37643..37936,38217..38354,38876..38918,40177..40298,41038..41150,41270..41321,41606..41735)
location: region:25027-41735:1
so has part: feature:25027-25215:1:exon
so has part: feature:26022-26106:1:exon
so has part: feature:27608-27672:1:exon
so has part: feature:27758-27964:1:exon
so has part: feature:28663-28725:1:exon
so has part: feature:29381-29408:1:exon
so has part: feature:30307-30805:1:exon
so has part: feature:31228-31277:1:exon
so has part: feature:33545-33645:1:exon
so has part: feature:34663-34812:1:exon
so has part: feature:34905-34981:1:exon
so has part: feature:35963-36102:1:exon
so has part: feature:36440-36531:1:exon
so has part: feature:36916-37022:1:exon
so has part: feature:37643-37936:1:exon
so has part: feature:38217-38354:1:exon
so has part: feature:38876-38918:1:exon
so has part: feature:40177-40298:1:exon
so has part: feature:41038-41150:1:exon
so has part: feature:41270-41321:1:exon
so has part: feature:41606-41735:1:exon

XP_027328352.1
type: Protein
SIO_000068: ncbiprotein

position:25027:1
position: 25027
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:41735:1
position: 41735
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:25027-25215:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:26022-26106:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:27608-27672:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:27758-27964:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:28663-28725:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:29381-29408:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:30307-30805:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:31228-31277:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:33545-33645:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:34663-34812:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:34905-34981:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:35963-36102:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:36440-36531:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:36916-37022:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:37643-37936:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:38217-38354:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:38876-38918:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:40177-40298:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:41038-41150:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:41270-41321:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:41606-41735:1:exon

MICOS13
type: Gene
subclass of: SO_0000704
RO_0002162: 8839
gene: MICOS13
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(43113..46477)
location: region:43113-46477:-1
so has part: feature:43113-46477:-1:exon
subclass of: SO_0000010

101804515
type: Gene
SIO_000068: ncbigene

position:43113:-1
position: 43113
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:46477:-1
position: 46477
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:43113-46477:-1:exon

MICOS13
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8839
gene: MICOS13
product: mitochondrial contact site and cristae organizing system subunit 13
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 126 samples with support for all annotated introns
transcript id: XM_027472589.2
SIO_010081: MICOS13
subclass of: SO_0000673
so part of: MICOS13
location: complement(join(43113..43333,44391..44442,45179..45335,46350..46477))
location: region:43113-46477:-1
so has part: feature:46350-46477:-1:exon
so has part: feature:45179-45335:-1:exon
so has part: feature:44391-44442:-1:exon
so has part: feature:43113-43333:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:46350-46477:-1:exon

position:46350:-1
position: 46350
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:45179-45335:-1:exon

position:45179:-1
position: 45179
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:45335:-1
position: 45335
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:44391-44442:-1:exon

position:44391:-1
position: 44391
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:44442:-1
position: 44442
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:43113-43333:-1:exon

position:43333:-1
position: 43333
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

MICOS13
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8839
gene: MICOS13
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: MICOS complex subunit MIC13
translation: MAARLLPAARFIIKGSLAGAAVYVAYDQGLLGSGAEGAEALKKAQTVLPPAIKEWTSYVGWELPPTPKIDFSPSDSWNKGVQTVMSALSVAPTRACEYTMEGWKYMKDLVK
SIO_010081: MICOS13
subclass of: SO_0000673
so part of: MICOS13
location: complement(join(43236..43333,44391..44442,45179..45335,46350..46378))
location: region:43236-46378:-1
so has part: feature:46350-46378:-1:exon
so has part: feature:45179-45335:-1:exon
so has part: feature:44391-44442:-1:exon
so has part: feature:43236-43333:-1:exon

XP_027328390.1
type: Protein
SIO_000068: ncbiprotein

position:43236:-1
position: 43236
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:46378:-1
position: 46378
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:46350-46378:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:45179-45335:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:44391-44442:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:43236-43333:-1:exon

HSD11B1L
type: Gene
subclass of: SO_0000704
RO_0002162: 8839
gene: HSD11B1L
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 46363..54627
location: region:46363-54627:1
so has part: feature:46363-54627:1:exon
subclass of: SO_0000010

101803565
type: Gene
SIO_000068: ncbigene

position:46363:1
position: 46363
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:54627:1
position: 54627
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:46363-54627:1:exon

HSD11B1L
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8839
gene: HSD11B1L
product: hydroxysteroid 11-beta dehydrogenase 1 like, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 10 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 116 samples with support for all annotated introns
transcript id: XM_027472582.2
SIO_010081: HSD11B1L
subclass of: SO_0000673
so part of: HSD11B1L
location: join(46363..46512,48288..48461,49098..49228,50244..50355,52032..52123,52742..52835,53422..53587,53877..54627)
location: region:46363-54627:1
so has part: feature:46363-46512:1:exon
so has part: feature:48288-48461:1:exon
so has part: feature:49098-49228:1:exon
so has part: feature:50244-50355:1:exon
so has part: feature:52032-52123:1:exon
so has part: feature:52742-52835:1:exon
so has part: feature:53422-53587:1:exon
so has part: feature:53877-54627:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:46363-46512:1:exon

position:46512:1
position: 46512
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:48288-48461:1:exon

position:48288:1
position: 48288
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:48461:1
position: 48461
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:49098-49228:1:exon

position:49098:1
position: 49098
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:49228:1
position: 49228
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:50244-50355:1:exon

position:50244:1
position: 50244
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:50355:1
position: 50355
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:52032-52123:1:exon

position:52032:1
position: 52032
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:52123:1
position: 52123
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:52742-52835:1:exon

position:52742:1
position: 52742
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:52835:1
position: 52835
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:53422-53587:1:exon

position:53422:1
position: 53422
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:53587:1
position: 53587
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:53877-54627:1:exon

position:53877:1
position: 53877
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

HSD11B1L
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8839
gene: HSD11B1L
product: hydroxysteroid 11-beta dehydrogenase 1 like, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 65 samples with support for all annotated introns
transcript id: XM_038169284.1
SIO_010081: HSD11B1L
subclass of: SO_0000673
so part of: HSD11B1L
location: join(46363..46512,48288..48461,49098..49228,52742..52835,53422..53587,53877..54627)
location: region:46363-54627:1
so has part: feature:46363-46512:1:exon
so has part: feature:48288-48461:1:exon
so has part: feature:49098-49228:1:exon
so has part: feature:52742-52835:1:exon
so has part: feature:53422-53587:1:exon
so has part: feature:53877-54627:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:46363-46512:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:48288-48461:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:49098-49228:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:52742-52835:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:53422-53587:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:53877-54627:1:exon

HSD11B1L
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8839
gene: HSD11B1L
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: hydroxysteroid 11-beta-dehydrogenase 1-like protein isoform X1
translation: MAAPRAGRRARGRREPGTWPGRPSPGGRAGRREGGHVVPAPGSPRRWLTASEEGDYSILAAVLSFEASFFTTLRDMRPLGKVLCATGIIAVLLAFFWKDTFNPESLSGARVLLTGASAGIGEQMAYHYARFGAEILLTARREAVLQKVMEKCLTLGAKKVFYVPADMSSPSEPEKVVQFAVQKLGGLDYLVLNHIGNSPFQMWNGDVEYTHWLMQVNFFSYVALATAALPTLEKNKGSLVVVSSLTGKIPTPFTTSYSATKFALDGFFSSLRHELIMQKRNVSVTLCILGLIDTDTALEKTRGKVYLTASPAAEAALAIIQAGATKVQEVFYPWWLQYTCSLWVLFPCHRNQVLQSYYNYSSP
SIO_010081: HSD11B1L
subclass of: SO_0000673
so part of: HSD11B1L
location: join(46377..46512,48288..48461,49098..49228,50244..50355,52032..52123,52742..52835,53422..53587,53877..54063)
location: region:46377-54063:1
so has part: feature:46377-46512:1:exon
so has part: feature:48288-48461:1:exon
so has part: feature:49098-49228:1:exon
so has part: feature:50244-50355:1:exon
so has part: feature:52032-52123:1:exon
so has part: feature:52742-52835:1:exon
so has part: feature:53422-53587:1:exon
so has part: feature:53877-54063:1:exon

XP_027328383.2
type: Protein
SIO_000068: ncbiprotein

position:46377:1
position: 46377
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:54063:1
position: 54063
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:46377-46512:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:48288-48461:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:49098-49228:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:50244-50355:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:52032-52123:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:52742-52835:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:53422-53587:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:53877-54063:1:exon

HSD11B1L
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8839
gene: HSD11B1L
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: hydroxysteroid 11-beta-dehydrogenase 1-like protein isoform X2
translation: MAAPRAGRRARGRREPGTWPGRPSPGGRAGRREGGHVVPAPGSPRRWLTASEEGDYSILAAVLSFEASFFTTLRDMRPLGKVLCATGIIAVLLAFFWKDTFNPESLSGARVLLTGASAGIGEQMAYHYARFGAEILLTARREAVLQKVNFFSYVALATAALPTLEKNKGSLVVVSSLTGKIPTPFTTSYSATKFALDGFFSSLRHELIMQKRNVSVTLCILGLIDTDTALEKTRGKVYLTASPAAEAALAIIQAGATKVQEVFYPWWLQYTCSLWVLFPCHRNQVLQSYYNYSSP
SIO_010081: HSD11B1L
subclass of: SO_0000673
so part of: HSD11B1L
location: join(46377..46512,48288..48461,49098..49228,52742..52835,53422..53587,53877..54063)
location: region:46377-54063:1
so has part: feature:46377-46512:1:exon
so has part: feature:48288-48461:1:exon
so has part: feature:49098-49228:1:exon
so has part: feature:52742-52835:1:exon
so has part: feature:53422-53587:1:exon
so has part: feature:53877-54063:1:exon

XP_038025212.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:46377-46512:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:48288-48461:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:49098-49228:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:52742-52835:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:53422-53587:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:53877-54063:1:exon

CELF5
type: Gene
subclass of: SO_0000704
RO_0002162: 8839
gene: CELF5
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(55288..93633)
location: region:55288-93633:-1
so has part: feature:55288-93633:-1:exon
subclass of: SO_0000010

101802940
type: Gene
SIO_000068: ncbigene

position:55288:-1
position: 55288
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:93633:-1
position: 93633
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:55288-93633:-1:exon

CELF5
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8839
gene: CELF5
product: CUGBP Elav-like family member 5, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 27 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 54 samples with support for all annotated introns
transcript id: XM_027472567.2
SIO_010081: CELF5
subclass of: SO_0000673
so part of: CELF5
location: complement(join(55288..56929,58786..58950,59062..59205,60282..60362,60446..60508,61017..61163,61825..61969,65817..65963,67100..67179,67765..67893,76263..76314,86859..86941,93343..93633))
location: region:55288-93633:-1
so has part: feature:93343-93633:-1:exon
so has part: feature:86859-86941:-1:exon
so has part: feature:76263-76314:-1:exon
so has part: feature:67765-67893:-1:exon
so has part: feature:67100-67179:-1:exon
so has part: feature:65817-65963:-1:exon
so has part: feature:61825-61969:-1:exon
so has part: feature:61017-61163:-1:exon
so has part: feature:60446-60508:-1:exon
so has part: feature:60282-60362:-1:exon
so has part: feature:59062-59205:-1:exon
so has part: feature:58786-58950:-1:exon
so has part: feature:55288-56929:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:93343-93633:-1:exon

position:93343:-1
position: 93343
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:86859-86941:-1:exon

position:86859:-1
position: 86859
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:86941:-1
position: 86941
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:76263-76314:-1:exon

position:76263:-1
position: 76263
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:76314:-1
position: 76314
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:67765-67893:-1:exon

position:67765:-1
position: 67765
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:67893:-1
position: 67893
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:67100-67179:-1:exon

position:67100:-1
position: 67100
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:67179:-1
position: 67179
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:65817-65963:-1:exon

position:65817:-1
position: 65817
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:65963:-1
position: 65963
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:61825-61969:-1:exon

position:61825:-1
position: 61825
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:61969:-1
position: 61969
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:61017-61163:-1:exon

position:61017:-1
position: 61017
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:61163:-1
position: 61163
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:60446-60508:-1:exon

position:60446:-1
position: 60446
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:60508:-1
position: 60508
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:60282-60362:-1:exon

position:60282:-1
position: 60282
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:60362:-1
position: 60362
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:59062-59205:-1:exon

position:59062:-1
position: 59062
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:59205:-1
position: 59205
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:58786-58950:-1:exon

position:58786:-1
position: 58786
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:58950:-1
position: 58950
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:55288-56929:-1:exon

position:56929:-1
position: 56929
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

CELF5
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8839
gene: CELF5
product: CUGBP Elav-like family member 5, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 35 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 79 samples with support for all annotated introns
transcript id: XM_027472566.2
SIO_010081: CELF5
subclass of: SO_0000673
so part of: CELF5
location: complement(join(55288..56929,58786..58950,59062..59205,60282..60362,60446..60508,61017..61163,61825..61969,65817..65963,67100..67179,67765..67893,76266..76314,86859..86941,93343..93487))
location: region:55288-93487:-1
so has part: feature:93343-93487:-1:exon
so has part: feature:86859-86941:-1:exon
so has part: feature:76266-76314:-1:exon
so has part: feature:67765-67893:-1:exon
so has part: feature:67100-67179:-1:exon
so has part: feature:65817-65963:-1:exon
so has part: feature:61825-61969:-1:exon
so has part: feature:61017-61163:-1:exon
so has part: feature:60446-60508:-1:exon
so has part: feature:60282-60362:-1:exon
so has part: feature:59062-59205:-1:exon
so has part: feature:58786-58950:-1:exon
so has part: feature:55288-56929:-1:exon

position:93487:-1
position: 93487
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:93343-93487:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:86859-86941:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:76266-76314:-1:exon

position:76266:-1
position: 76266
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:67765-67893:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:67100-67179:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:65817-65963:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:61825-61969:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:61017-61163:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:60446-60508:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:60282-60362:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:59062-59205:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:58786-58950:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:55288-56929:-1:exon

CELF5
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8839
gene: CELF5
product: CUGBP Elav-like family member 5, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 24 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 23 samples with support for all annotated introns
transcript id: XM_013099493.4
SIO_010081: CELF5
subclass of: SO_0000673
so part of: CELF5
location: complement(join(55288..56929,58786..58950,59062..59205,60282..60362,60446..60508,61017..61163,61825..61969,65817..65963,67100..67179,67765..67893,76263..76314,86859..86941,90616..90776))
location: region:55288-90776:-1
so has part: feature:90616-90776:-1:exon
so has part: feature:86859-86941:-1:exon
so has part: feature:76263-76314:-1:exon
so has part: feature:67765-67893:-1:exon
so has part: feature:67100-67179:-1:exon
so has part: feature:65817-65963:-1:exon
so has part: feature:61825-61969:-1:exon
so has part: feature:61017-61163:-1:exon
so has part: feature:60446-60508:-1:exon
so has part: feature:60282-60362:-1:exon
so has part: feature:59062-59205:-1:exon
so has part: feature:58786-58950:-1:exon
so has part: feature:55288-56929:-1:exon

position:90776:-1
position: 90776
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:90616-90776:-1:exon

position:90616:-1
position: 90616
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:86859-86941:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:76263-76314:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:67765-67893:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:67100-67179:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:65817-65963:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:61825-61969:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:61017-61163:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:60446-60508:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:60282-60362:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:59062-59205:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:58786-58950:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:55288-56929:-1:exon

CELF5
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8839
gene: CELF5
product: CUGBP Elav-like family member 5, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 26 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 28 samples with support for all annotated introns
transcript id: XM_013099495.4
SIO_010081: CELF5
subclass of: SO_0000673
so part of: CELF5
location: complement(join(55288..56929,58786..58950,59062..59205,60282..60362,60446..60508,61017..61163,61825..61969,65817..65963,67100..67179,67765..67893,76266..76314,86859..86941,90616..90774))
location: region:55288-90774:-1
so has part: feature:90616-90774:-1:exon
so has part: feature:86859-86941:-1:exon
so has part: feature:76266-76314:-1:exon
so has part: feature:67765-67893:-1:exon
so has part: feature:67100-67179:-1:exon
so has part: feature:65817-65963:-1:exon
so has part: feature:61825-61969:-1:exon
so has part: feature:61017-61163:-1:exon
so has part: feature:60446-60508:-1:exon
so has part: feature:60282-60362:-1:exon
so has part: feature:59062-59205:-1:exon
so has part: feature:58786-58950:-1:exon
so has part: feature:55288-56929:-1:exon

position:90774:-1
position: 90774
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:90616-90774:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:86859-86941:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:76266-76314:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:67765-67893:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:67100-67179:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:65817-65963:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:61825-61969:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:61017-61163:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:60446-60508:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:60282-60362:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:59062-59205:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:58786-58950:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:55288-56929:-1:exon

CELF5
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8839
gene: CELF5
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: CUGBP Elav-like family member 5 isoform X4
translation: MARLREGEARRQPPPPPLPPAPPPPPPPRRASPMSSSGGAEPPAQPGGMKDLDAIKLFVGQIPRNLEEKDLKPLFEQFGKIYELTVLKDRYTGMHKGCAFLTYCARDSAIKAQTALHEQKTLPGMARPIQVKPADSESRGGRDRKLFVGMLNKQQSEDDVLRLFEPFGVIDECTVLRGPDGNSKGCAFVKFSSHTEAQAAIHALHGSQTMPGASSSLVVKFADTDKERTLRRMQQMVGQLGIFTPSLTLPFSPYSAYAQALMQQQTTVLSTSHGSYLSPGVAFSPCHIQQIGAVSLNGLPATPIAQTSGLHSPPLLGTTGVPGLVAPISNGFTSVVPFASGHPTLETVYTNGFVPYSAQSPSVAETLHPAFTGVQQYAAVYPTTSITPIAQSIPQPPPILQQQREGPEGCNLFIYHLPQEFGDNELMQMFLPFGNIISSKVFMDRATNQSKCFGFVSFDNPSSAQTAIQAMNGFQIGMKRLKVQLKRPKDANHPY
SIO_010081: CELF5
subclass of: SO_0000673
so part of: CELF5
location: complement(join(58823..58950,59062..59205,60282..60362,60446..60508,61017..61163,61825..61969,65817..65963,67100..67179,67765..67893,76263..76314,86859..86941,93343..93631))
location: region:58823-93631:-1
so has part: feature:93343-93631:-1:exon
so has part: feature:86859-86941:-1:exon
so has part: feature:76263-76314:-1:exon
so has part: feature:67765-67893:-1:exon
so has part: feature:67100-67179:-1:exon
so has part: feature:65817-65963:-1:exon
so has part: feature:61825-61969:-1:exon
so has part: feature:61017-61163:-1:exon
so has part: feature:60446-60508:-1:exon
so has part: feature:60282-60362:-1:exon
so has part: feature:59062-59205:-1:exon
so has part: feature:58823-58950:-1:exon

XP_027328368.2
type: Protein
SIO_000068: ncbiprotein

position:58823:-1
position: 58823
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:93631:-1
position: 93631
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:93343-93631:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:86859-86941:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:76263-76314:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:67765-67893:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:67100-67179:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:65817-65963:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:61825-61969:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:61017-61163:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:60446-60508:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:60282-60362:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:59062-59205:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:58823-58950:-1:exon

CELF5
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8839
gene: CELF5
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: CUGBP Elav-like family member 5 isoform X3
translation: MKDLDAIKLFVGQIPRNLEEKDLKPLFEQFGKIYELTVLKDRYTGMHKGCAFLTYCARDSAIKAQTALHEQKTLPGMARPIQVKPADSESRGGDRKLFVGMLNKQQSEDDVLRLFEPFGVIDECTVLRGPDGNSKGCAFVKFSSHTEAQAAIHALHGSQTMPGASSSLVVKFADTDKERTLRRMQQMVGQLGIFTPSLTLPFSPYSAYAQALMQQQTTVLSTSHGSYLSPGVAFSPCHIQQIGAVSLNGLPATPIAQTSGLHSPPLLGTTGVPGLVAPISNGFTSVVPFASGHPTLETVYTNGFVPYSAQSPSVAETLHPAFTGVQQYAAVYPTTSITPIAQSIPQPPPILQQQREGPEGCNLFIYHLPQEFGDNELMQMFLPFGNIISSKVFMDRATNQSKCFGFVSFDNPSSAQTAIQAMNGFQIGMKRLKVQLKRPKDANHPY
SIO_010081: CELF5
subclass of: SO_0000673
so part of: CELF5
location: complement(join(58823..58950,59062..59205,60282..60362,60446..60508,61017..61163,61825..61969,65817..65963,67100..67179,67765..67893,76266..76314,86859..86941,93343..93487))
location: region:58823-93487:-1
so has part: feature:93343-93487:-1:exon
so has part: feature:86859-86941:-1:exon
so has part: feature:76266-76314:-1:exon
so has part: feature:67765-67893:-1:exon
so has part: feature:67100-67179:-1:exon
so has part: feature:65817-65963:-1:exon
so has part: feature:61825-61969:-1:exon
so has part: feature:61017-61163:-1:exon
so has part: feature:60446-60508:-1:exon
so has part: feature:60282-60362:-1:exon
so has part: feature:59062-59205:-1:exon
so has part: feature:58823-58950:-1:exon

XP_027328367.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:93343-93487:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:86859-86941:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:76266-76314:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:67765-67893:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:67100-67179:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:65817-65963:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:61825-61969:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:61017-61163:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:60446-60508:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:60282-60362:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:59062-59205:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:58823-58950:-1:exon

CELF5
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8839
gene: CELF5
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: CUGBP Elav-like family member 5 isoform X2
translation: MRYGTELLGNRSGRSNPLTGHQGTGCAFLTYCARDSAIKAQTALHEQKTLPGMARPIQVKPADSESRGGDRKLFVGMLNKQQSEDDVLRLFEPFGVIDECTVLRGPDGNSKGCAFVKFSSHTEAQAAIHALHGSQTMPGASSSLVVKFADTDKERTLRRMQQMVGQLGIFTPSLTLPFSPYSAYAQALMQQQTTVLSTSHGSYLSPGVAFSPCHIQQIGAVSLNGLPATPIAQTSGLHSPPLLGTTGVPGLVAPISNGFTSVVPFASGHPTLETVYTNGFVPYSAQSPSVAETLHPAFTGVQQYAAVYPTTSITPIAQSIPQPPPILQQQREGPEGCNLFIYHLPQEFGDNELMQMFLPFGNIISSKVFMDRATNQSKCFGFVSFDNPSSAQTAIQAMNGFQIGMKRLKVQLKRPKDANHPY
SIO_010081: CELF5
subclass of: SO_0000673
so part of: CELF5
location: complement(join(58823..58950,59062..59205,60282..60362,60446..60508,61017..61163,61825..61969,65817..65963,67100..67179,67765..67893,76266..76314,86859..86941,90616..90688))
location: region:58823-90688:-1
so has part: feature:90616-90688:-1:exon
so has part: feature:86859-86941:-1:exon
so has part: feature:76266-76314:-1:exon
so has part: feature:67765-67893:-1:exon
so has part: feature:67100-67179:-1:exon
so has part: feature:65817-65963:-1:exon
so has part: feature:61825-61969:-1:exon
so has part: feature:61017-61163:-1:exon
so has part: feature:60446-60508:-1:exon
so has part: feature:60282-60362:-1:exon
so has part: feature:59062-59205:-1:exon
so has part: feature:58823-58950:-1:exon

XP_012954949.2
type: Protein
SIO_000068: ncbiprotein

position:90688:-1
position: 90688
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:90616-90688:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:86859-86941:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:76266-76314:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:67765-67893:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:67100-67179:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:65817-65963:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:61825-61969:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:61017-61163:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:60446-60508:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:60282-60362:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:59062-59205:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:58823-58950:-1:exon

CELF5
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8839
gene: CELF5
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: CUGBP Elav-like family member 5 isoform X1
translation: MRYGTELLGNRSGRSNPLTGHQGTGCAFLTYCARDSAIKAQTALHEQKTLPGMARPIQVKPADSESRGGRDRKLFVGMLNKQQSEDDVLRLFEPFGVIDECTVLRGPDGNSKGCAFVKFSSHTEAQAAIHALHGSQTMPGASSSLVVKFADTDKERTLRRMQQMVGQLGIFTPSLTLPFSPYSAYAQALMQQQTTVLSTSHGSYLSPGVAFSPCHIQQIGAVSLNGLPATPIAQTSGLHSPPLLGTTGVPGLVAPISNGFTSVVPFASGHPTLETVYTNGFVPYSAQSPSVAETLHPAFTGVQQYAAVYPTTSITPIAQSIPQPPPILQQQREGPEGCNLFIYHLPQEFGDNELMQMFLPFGNIISSKVFMDRATNQSKCFGFVSFDNPSSAQTAIQAMNGFQIGMKRLKVQLKRPKDANHPY
SIO_010081: CELF5
subclass of: SO_0000673
so part of: CELF5
location: complement(join(58823..58950,59062..59205,60282..60362,60446..60508,61017..61163,61825..61969,65817..65963,67100..67179,67765..67893,76263..76314,86859..86941,90616..90688))
location: region:58823-90688:-1
so has part: feature:90616-90688:-1:exon
so has part: feature:86859-86941:-1:exon
so has part: feature:76263-76314:-1:exon
so has part: feature:67765-67893:-1:exon
so has part: feature:67100-67179:-1:exon
so has part: feature:65817-65963:-1:exon
so has part: feature:61825-61969:-1:exon
so has part: feature:61017-61163:-1:exon
so has part: feature:60446-60508:-1:exon
so has part: feature:60282-60362:-1:exon
so has part: feature:59062-59205:-1:exon
so has part: feature:58823-58950:-1:exon

XP_012954947.2
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:90616-90688:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:86859-86941:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:76263-76314:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:67765-67893:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:67100-67179:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:65817-65963:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:61825-61969:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:61017-61163:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:60446-60508:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:60282-60362:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:59062-59205:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:58823-58950:-1:exon

LOC106017109
type: Gene
subclass of: SO_0000704
RO_0002162: 8839
gene: LOC106017109
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(95186..100168)
location: region:95186-100168:-1
so has part: feature:95186-100168:-1:exon
subclass of: SO_0000010

106017109
type: Gene
SIO_000068: ncbigene

position:95186:-1
position: 95186
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:100168:-1
position: 100168
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:95186-100168:-1:exon

LOC106017109
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8839
gene: LOC106017109
product: SUB1 regulator of transcription
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 94% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_021272418.3
SIO_010081: LOC106017109
subclass of: SO_0000673
so part of: LOC106017109
location: complement(join(95186..96944,98799..98914,99136..99257,100157..100168))
location: region:95186-100168:-1
so has part: feature:100157-100168:-1:exon
so has part: feature:99136-99257:-1:exon
so has part: feature:98799-98914:-1:exon
so has part: feature:95186-96944:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:100157-100168:-1:exon

position:100157:-1
position: 100157
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:99136-99257:-1:exon

position:99136:-1
position: 99136
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:99257:-1
position: 99257
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:98799-98914:-1:exon

position:98799:-1
position: 98799
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:98914:-1
position: 98914
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:95186-96944:-1:exon

position:96944:-1
position: 96944
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC106017109
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8839
gene: LOC106017109
note: The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: substituted 1 base at 1 genomic stop codon; Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
transl except: (pos:complement(99156..99158),aa:OTHER)
product: LOW QUALITY PROTEIN: activated RNA polymerase II transcriptional coactivator p15
translation: MYIEKRRKEGKKEMSSKAEKRPKSEARPPGVTAKPQDXDSEEEGTLQTGKMRYVRVSRFKGKVLVDIREFCVDKEGDMKLGRKGITLSAEQWNRLKEIIPHIDAAVKIF
SIO_010081: LOC106017109
subclass of: SO_0000673
so part of: LOC106017109
location: complement(join(96865..96944,98799..98914,99136..99257,100157..100168))
location: region:96865-100168:-1
so has part: feature:100157-100168:-1:exon
so has part: feature:99136-99257:-1:exon
so has part: feature:98799-98914:-1:exon
so has part: feature:96865-96944:-1:exon

XP_021128093.3
type: Protein
SIO_000068: ncbiprotein

position:96865:-1
position: 96865
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:100157-100168:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:99136-99257:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:98799-98914:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:96865-96944:-1:exon

NCLN
type: Gene
subclass of: SO_0000704
RO_0002162: 8839
gene: NCLN
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(100005..111152)
location: region:100005-111152:-1
so has part: feature:100005-111152:-1:exon
subclass of: SO_0000010

101803234
type: Gene
SIO_000068: ncbigene

position:100005:-1
position: 100005
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:111152:-1
position: 111152
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:100005-111152:-1:exon

NCLN
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8839
gene: NCLN
product: nicalin, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 124 samples with support for all annotated introns
transcript id: XM_027472562.2
SIO_010081: NCLN
subclass of: SO_0000673
so part of: NCLN
location: complement(join(100005..104000,104397..104475,104562..104615,105225..105385,105501..105539,105628..105715,105927..106105,106534..106673,106842..106930,107360..107463,107633..107713,107904..107998,108594..108738,108974..109164,110879..111152))
location: region:100005-111152:-1
so has part: feature:110879-111152:-1:exon
so has part: feature:108974-109164:-1:exon
so has part: feature:108594-108738:-1:exon
so has part: feature:107904-107998:-1:exon
so has part: feature:107633-107713:-1:exon
so has part: feature:107360-107463:-1:exon
so has part: feature:106842-106930:-1:exon
so has part: feature:106534-106673:-1:exon
so has part: feature:105927-106105:-1:exon
so has part: feature:105628-105715:-1:exon
so has part: feature:105501-105539:-1:exon
so has part: feature:105225-105385:-1:exon
so has part: feature:104562-104615:-1:exon
so has part: feature:104397-104475:-1:exon
so has part: feature:100005-104000:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:110879-111152:-1:exon

position:110879:-1
position: 110879
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:108974-109164:-1:exon

position:108974:-1
position: 108974
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:109164:-1
position: 109164
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:108594-108738:-1:exon

position:108594:-1
position: 108594
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:108738:-1
position: 108738
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:107904-107998:-1:exon

position:107904:-1
position: 107904
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:107998:-1
position: 107998
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:107633-107713:-1:exon

position:107633:-1
position: 107633
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:107713:-1
position: 107713
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:107360-107463:-1:exon

position:107360:-1
position: 107360
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:107463:-1
position: 107463
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:106842-106930:-1:exon

position:106842:-1
position: 106842
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:106930:-1
position: 106930
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:106534-106673:-1:exon

position:106534:-1
position: 106534
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:106673:-1
position: 106673
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:105927-106105:-1:exon

position:105927:-1
position: 105927
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:106105:-1
position: 106105
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:105628-105715:-1:exon

position:105628:-1
position: 105628
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:105715:-1
position: 105715
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:105501-105539:-1:exon

position:105501:-1
position: 105501
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:105539:-1
position: 105539
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:105225-105385:-1:exon

position:105225:-1
position: 105225
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:105385:-1
position: 105385
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:104562-104615:-1:exon

position:104562:-1
position: 104562
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:104615:-1
position: 104615
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:104397-104475:-1:exon

position:104397:-1
position: 104397
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:104475:-1
position: 104475
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:100005-104000:-1:exon

position:104000:-1
position: 104000
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

NCLN
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8839
gene: NCLN
product: nicalin, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 123 samples with support for all annotated introns
transcript id: XM_027472561.2
SIO_010081: NCLN
subclass of: SO_0000673
so part of: NCLN
location: complement(join(100005..103714,103901..104000,104397..104475,104562..104615,105225..105388,105501..105539,105628..105715,105927..106105,106534..106673,106842..106930,107360..107463,107633..107713,107904..107998,108594..108738,108974..109164,110879..111150))
location: region:100005-111150:-1
so has part: feature:110879-111150:-1:exon
so has part: feature:108974-109164:-1:exon
so has part: feature:108594-108738:-1:exon
so has part: feature:107904-107998:-1:exon
so has part: feature:107633-107713:-1:exon
so has part: feature:107360-107463:-1:exon
so has part: feature:106842-106930:-1:exon
so has part: feature:106534-106673:-1:exon
so has part: feature:105927-106105:-1:exon
so has part: feature:105628-105715:-1:exon
so has part: feature:105501-105539:-1:exon
so has part: feature:105225-105388:-1:exon
so has part: feature:104562-104615:-1:exon
so has part: feature:104397-104475:-1:exon
so has part: feature:103901-104000:-1:exon
so has part: feature:100005-103714:-1:exon

position:111150:-1
position: 111150
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:110879-111150:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:108974-109164:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:108594-108738:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:107904-107998:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:107633-107713:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:107360-107463:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:106842-106930:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:106534-106673:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:105927-106105:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:105628-105715:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:105501-105539:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:105225-105388:-1:exon

position:105388:-1
position: 105388
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:104562-104615:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:104397-104475:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:103901-104000:-1:exon

position:103901:-1
position: 103901
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:100005-103714:-1:exon

position:103714:-1
position: 103714
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

NCLN
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8839
gene: NCLN
product: nicalin, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 126 samples with support for all annotated introns
transcript id: XM_027472560.2
SIO_010081: NCLN
subclass of: SO_0000673
so part of: NCLN
location: complement(join(100005..104000,104397..104475,104562..104615,105225..105388,105501..105539,105628..105715,105927..106105,106534..106673,106842..106930,107360..107463,107633..107713,107904..107998,108594..108738,108974..109164,110879..111149))
location: region:100005-111149:-1
so has part: feature:110879-111149:-1:exon
so has part: feature:108974-109164:-1:exon
so has part: feature:108594-108738:-1:exon
so has part: feature:107904-107998:-1:exon
so has part: feature:107633-107713:-1:exon
so has part: feature:107360-107463:-1:exon
so has part: feature:106842-106930:-1:exon
so has part: feature:106534-106673:-1:exon
so has part: feature:105927-106105:-1:exon
so has part: feature:105628-105715:-1:exon
so has part: feature:105501-105539:-1:exon
so has part: feature:105225-105388:-1:exon
so has part: feature:104562-104615:-1:exon
so has part: feature:104397-104475:-1:exon
so has part: feature:100005-104000:-1:exon

position:111149:-1
position: 111149
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:110879-111149:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:108974-109164:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:108594-108738:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:107904-107998:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:107633-107713:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:107360-107463:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:106842-106930:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:106534-106673:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:105927-106105:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:105628-105715:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:105501-105539:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:105225-105388:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:104562-104615:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:104397-104475:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:100005-104000:-1:exon

NCLN
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8839
gene: NCLN
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: nicalin isoform X2
translation: MLEEAGEVLESVLKASCLPLSFLLFVPAVLLLLGPPPAAEAAHEFTVYRMQQYELGGQPYGTRSAVLNTEARTVEADVLSRRCVMMRLVDFSYEQYQKALRQSAGAVVIILPRSISSVPQDVVRQFMEIEPEMLAMETIVPVYFAVEDEELLSIYEQTRAASASQGSASAAEVLLHTATANGFQMVTSGAQSKAINDWLIPSVEGRLTGLGGEDLPTVVIVAHYDSFGVAPWLSHGADSNGSGISVLLELARLFSRLYTYRRTHAGYNLLFFASGGGKFNYQGTKRWLEDNLDHTDSSLLQDNVAFVLCLDTLGRGNSLHLHVSKPPKEGTLQHAFLRELELVVASQFPEVKFSMVHKKINLAEDMLAWEHERFAIRRLPAFTISHLESHRDSLRNSIMDRRARVDTKALTRNTRIIAEALTRVIYNLTDKGAPADLQIFTDQMIQQEQLESVMDWLSSQPRAAQLIDKDSTFLSTLEYYMGRYLKDVKQHHVKADKRDPEFVFYDQLKQVMNAYRVKPAIFDLLLAVCIAAYLGVAYVAVQHFGLLYKMIQRLSLKTKQQ
SIO_010081: NCLN
subclass of: SO_0000673
so part of: NCLN
location: complement(join(103941..104000,104397..104475,104562..104615,105225..105385,105501..105539,105628..105715,105927..106105,106534..106673,106842..106930,107360..107463,107633..107713,107904..107998,108594..108738,108974..109164,110879..111059))
location: region:103941-111059:-1
so has part: feature:110879-111059:-1:exon
so has part: feature:108974-109164:-1:exon
so has part: feature:108594-108738:-1:exon
so has part: feature:107904-107998:-1:exon
so has part: feature:107633-107713:-1:exon
so has part: feature:107360-107463:-1:exon
so has part: feature:106842-106930:-1:exon
so has part: feature:106534-106673:-1:exon
so has part: feature:105927-106105:-1:exon
so has part: feature:105628-105715:-1:exon
so has part: feature:105501-105539:-1:exon
so has part: feature:105225-105385:-1:exon
so has part: feature:104562-104615:-1:exon
so has part: feature:104397-104475:-1:exon
so has part: feature:103941-104000:-1:exon

XP_027328363.1
type: Protein
SIO_000068: ncbiprotein

position:103941:-1
position: 103941
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:111059:-1
position: 111059
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:110879-111059:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:108974-109164:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:108594-108738:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:107904-107998:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:107633-107713:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:107360-107463:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:106842-106930:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:106534-106673:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:105927-106105:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:105628-105715:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:105501-105539:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:105225-105385:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:104562-104615:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:104397-104475:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:103941-104000:-1:exon

NCLN
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8839
gene: NCLN
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: nicalin isoform X1
translation: MLEEAGEVLESVLKASCLPLSFLLFVPAVLLLLGPPPAAEAAHEFTVYRMQQYELGGQPYGTRSAVLNTEARTVEADVLSRRCVMMRLVDFSYEQYQKALRQSAGAVVIILPRSISSVPQDVVRQFMEIEPEMLAMETIVPVYFAVEDEELLSIYEQTRAASASQGSASAAEVLLHTATANGFQMVTSGAQSKAINDWLIPSVEGRLTGLGGEDLPTVVIVAHYDSFGVAPWLSHGADSNGSGISVLLELARLFSRLYTYRRTHAGYNLLFFASGGGKFNYQGTKRWLEDNLDHTDSSLLQDNVAFVLCLDTLGRGNSLHLHVSKPPKEGTLQHAFLRELELVVASQFPEVKFSMVHKKINLAEDMLAWEHERFAIRRLPAFTISHLESHRDSLRNSIMDRRARVDTKALTRNTRIIAEALTRVIYNLTDKGAPADLQIFTDQMQIQQEQLESVMDWLSSQPRAAQLIDKDSTFLSTLEYYMGRYLKDVKQHHVKADKRDPEFVFYDQLKQVMNAYRVKPAIFDLLLAVCIAAYLGVAYVAVQHFGLLYKMIQRLSLKTKQQ
SIO_010081: NCLN
subclass of: SO_0000673
so part of: NCLN
location: complement(join(103941..104000,104397..104475,104562..104615,105225..105388,105501..105539,105628..105715,105927..106105,106534..106673,106842..106930,107360..107463,107633..107713,107904..107998,108594..108738,108974..109164,110879..111059))
location: region:103941-111059:-1
so has part: feature:110879-111059:-1:exon
so has part: feature:108974-109164:-1:exon
so has part: feature:108594-108738:-1:exon
so has part: feature:107904-107998:-1:exon
so has part: feature:107633-107713:-1:exon
so has part: feature:107360-107463:-1:exon
so has part: feature:106842-106930:-1:exon
so has part: feature:106534-106673:-1:exon
so has part: feature:105927-106105:-1:exon
so has part: feature:105628-105715:-1:exon
so has part: feature:105501-105539:-1:exon
so has part: feature:105225-105388:-1:exon
so has part: feature:104562-104615:-1:exon
so has part: feature:104397-104475:-1:exon
so has part: feature:103941-104000:-1:exon

XP_027328361.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:110879-111059:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:108974-109164:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:108594-108738:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:107904-107998:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:107633-107713:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:107360-107463:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:106842-106930:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:106534-106673:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:105927-106105:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:105628-105715:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:105501-105539:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:105225-105388:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:104562-104615:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:104397-104475:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:103941-104000:-1:exon

NCLN
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8839
gene: NCLN
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: nicalin isoform X1
translation: MLEEAGEVLESVLKASCLPLSFLLFVPAVLLLLGPPPAAEAAHEFTVYRMQQYELGGQPYGTRSAVLNTEARTVEADVLSRRCVMMRLVDFSYEQYQKALRQSAGAVVIILPRSISSVPQDVVRQFMEIEPEMLAMETIVPVYFAVEDEELLSIYEQTRAASASQGSASAAEVLLHTATANGFQMVTSGAQSKAINDWLIPSVEGRLTGLGGEDLPTVVIVAHYDSFGVAPWLSHGADSNGSGISVLLELARLFSRLYTYRRTHAGYNLLFFASGGGKFNYQGTKRWLEDNLDHTDSSLLQDNVAFVLCLDTLGRGNSLHLHVSKPPKEGTLQHAFLRELELVVASQFPEVKFSMVHKKINLAEDMLAWEHERFAIRRLPAFTISHLESHRDSLRNSIMDRRARVDTKALTRNTRIIAEALTRVIYNLTDKGAPADLQIFTDQMQIQQEQLESVMDWLSSQPRAAQLIDKDSTFLSTLEYYMGRYLKDVKQHHVKADKRDPEFVFYDQLKQVMNAYRVKPAIFDLLLAVCIAAYLGVAYVAVQHFGLLYKMIQRLSLKTKQQ
SIO_010081: NCLN
subclass of: SO_0000673
so part of: NCLN
location: complement(join(103941..104000,104397..104475,104562..104615,105225..105388,105501..105539,105628..105715,105927..106105,106534..106673,106842..106930,107360..107463,107633..107713,107904..107998,108594..108738,108974..109164,110879..111059))
location: region:103941-111059:-1
so has part: feature:110879-111059:-1:exon
so has part: feature:108974-109164:-1:exon
so has part: feature:108594-108738:-1:exon
so has part: feature:107904-107998:-1:exon
so has part: feature:107633-107713:-1:exon
so has part: feature:107360-107463:-1:exon
so has part: feature:106842-106930:-1:exon
so has part: feature:106534-106673:-1:exon
so has part: feature:105927-106105:-1:exon
so has part: feature:105628-105715:-1:exon
so has part: feature:105501-105539:-1:exon
so has part: feature:105225-105388:-1:exon
so has part: feature:104562-104615:-1:exon
so has part: feature:104397-104475:-1:exon
so has part: feature:103941-104000:-1:exon

XP_027328362.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:110879-111059:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:108974-109164:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:108594-108738:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:107904-107998:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:107633-107713:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:107360-107463:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:106842-106930:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:106534-106673:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:105927-106105:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:105628-105715:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:105501-105539:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:105225-105388:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:104562-104615:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:104397-104475:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:103941-104000:-1:exon

S1PR4
type: Gene
subclass of: SO_0000704
RO_0002162: 8839
gene: S1PR4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(111342..115249)
location: region:111342-115249:-1
so has part: feature:111342-115249:-1:exon
subclass of: SO_0000010

101802557
type: Gene
SIO_000068: ncbigene

position:111342:-1
position: 111342
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:115249:-1
position: 115249
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:111342-115249:-1:exon

S1PR4
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8839
gene: S1PR4
product: sphingosine-1-phosphate receptor 4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 62 samples with support for all annotated introns
transcript id: XM_005019523.5
SIO_010081: S1PR4
subclass of: SO_0000673
so part of: S1PR4
location: complement(join(111342..114348,115114..115249))
location: region:111342-115249:-1
so has part: feature:115114-115249:-1:exon
so has part: feature:111342-114348:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:115114-115249:-1:exon

position:115114:-1
position: 115114
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:111342-114348:-1:exon

position:114348:-1
position: 114348
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

S1PR4
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8839
gene: S1PR4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: sphingosine 1-phosphate receptor 4
translation: MDGPGLSWLVNRSFPFPLGSAQYPELRLDLLDRKGSCLQLAAMRNVNIILQHYNFTGKLTNRQSRDEGMGLIRTTFVIISCIIILENLLVLLAILRCLRARRWVYSCIASITVSDLLAGVAYLSNLCLSGKKTFQLSPQLWFLREGILFIALAASTFSLLVTAIERYSAMVRPIAENEASKTLRLRGLIISCWLLAFIIGLLPLLGWNCLCDFNACSVLLPLYSKNYILFSVVMFSIILLGIIGLYISIFQLVQASSKQTTSRHSRKRSLRLLKTVLMILGAFIICWSPLFALMLFDVFCETQTCRLLHSLDWTLALAMLNSGVNPIIYSLRSVEVRRAVGSLLCCCCLRVGLCKPGDCLVITDINSGSSTESSLRYRESFRSSVALNARPRAPLSSNSSMMSNLPSL
SIO_010081: S1PR4
subclass of: SO_0000673
so part of: S1PR4
location: complement(112943..114169)
location: region:112943-114169:-1
so has part: feature:112943-114169:-1:exon

XP_005019580.1
type: Protein
SIO_000068: ncbiprotein

position:112943:-1
position: 112943
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:114169:-1
position: 114169
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:112943-114169:-1:exon

LOC101802752
type: Gene
subclass of: SO_0000704
RO_0002162: 8839
gene: LOC101802752
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 120254..122304
location: region:120254-122304:1
so has part: feature:120254-122304:1:exon
subclass of: SO_0000010

101802752
type: Gene
SIO_000068: ncbigene

position:120254:1
position: 120254
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:122304:1
position: 122304
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:120254-122304:1:exon

LOC101802752
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8839
gene: LOC101802752
product: mast cell protease 1A
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 8 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 104 samples with support for all annotated introns
transcript id: XM_013099492.4
SIO_010081: LOC101802752
subclass of: SO_0000673
so part of: LOC101802752
location: join(120254..120412,120503..120647,120839..120974,121263..121514,121830..122304)
location: region:120254-122304:1
so has part: feature:120254-120412:1:exon
so has part: feature:120503-120647:1:exon
so has part: feature:120839-120974:1:exon
so has part: feature:121263-121514:1:exon
so has part: feature:121830-122304:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:120254-120412:1:exon

position:120412:1
position: 120412
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:120503-120647:1:exon

position:120503:1
position: 120503
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:120647:1
position: 120647
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:120839-120974:1:exon

position:120839:1
position: 120839
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:120974:1
position: 120974
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:121263-121514:1:exon

position:121263:1
position: 121263
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:121514:1
position: 121514
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:121830-122304:1:exon

position:121830:1
position: 121830
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC101802752
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8839
gene: LOC101802752
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: mast cell protease 1A
translation: MCQSQLLLALLLLFCLWADTSALWGQIVGGHEAQPHSHPYMAYLKIGKFACGGFLVAPDWVMTAAHCMGNATVILGAHNIYEPETTQQVRGVLRYHRHPEYDPRTVSNDIMLLKLTAKATLNSYVKTIPLPKTSGYLPTGTKCSIAGWGLIDKDQETSKLFETKVTIYSRRKCIHFYPHLNAGMVCAGSFHELRDSSQGDSGGPLVCNKVARGIVSFGHDNPPGVYTRISNYLPWIKKTMKK
SIO_010081: LOC101802752
subclass of: SO_0000673
so part of: LOC101802752
location: join(120352..120412,120503..120647,120839..120974,121263..121514,121830..121964)
location: region:120352-121964:1
so has part: feature:120352-120412:1:exon
so has part: feature:120503-120647:1:exon
so has part: feature:120839-120974:1:exon
so has part: feature:121263-121514:1:exon
so has part: feature:121830-121964:1:exon

XP_012954946.2
type: Protein
SIO_000068: ncbiprotein

position:120352:1
position: 120352
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:121964:1
position: 121964
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:120352-120412:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:120503-120647:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:120839-120974:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:121263-121514:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:121830-121964:1:exon

LOC101802373
type: Gene
subclass of: SO_0000704
RO_0002162: 8839
gene: LOC101802373
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 122917..128117
location: region:122917-128117:1
so has part: feature:122917-128117:1:exon
subclass of: SO_0000010

101802373
type: Gene
SIO_000068: ncbigene

position:122917:1
position: 122917
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:128117:1
position: 128117
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:122917-128117:1:exon

LOC101802373
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8839
gene: LOC101802373
product: granzyme G
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 29 samples with support for all annotated introns
transcript id: XM_005019522.5
SIO_010081: LOC101802373
subclass of: SO_0000673
so part of: LOC101802373
location: join(122917..125194,125303..125450,126320..126461,126617..126850,127423..128117)
location: region:122917-128117:1
so has part: feature:122917-125194:1:exon
so has part: feature:125303-125450:1:exon
so has part: feature:126320-126461:1:exon
so has part: feature:126617-126850:1:exon
so has part: feature:127423-128117:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:122917-125194:1:exon

position:125194:1
position: 125194
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:125303-125450:1:exon

position:125303:1
position: 125303
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:125450:1
position: 125450
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:126320-126461:1:exon

position:126320:1
position: 126320
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:126461:1
position: 126461
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:126617-126850:1:exon

position:126617:1
position: 126617
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:126850:1
position: 126850
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:127423-128117:1:exon

position:127423:1
position: 127423
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC101802373
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8839
gene: LOC101802373
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: granzyme G
translation: MSLTSAVSWSLVSGYKNFLGAGRDPSCSLTSKASTEAEHAAMEHLQKLLLALLLVACPPAKASHAWNRMAGAGRAKAPARPYMAYLEGKNGHFCGGFLVAPSWVMTAAQCFSHKPLTVILGAHNIQRREESWQMFEVQRYHRHPDFTNRMQGNDILLLKLKGNATSNSYVRTISFQKIKASGGTVCSIAGWGHKAPTATFHEANVTIHKQRDCLTMYPGLANNLICANSGSAGVPEEGDTGGPLVCNNKAYGIFSYQYKNRIGFYTHIAPYLPWVNSIMKSA
SIO_010081: LOC101802373
subclass of: SO_0000673
so part of: LOC101802373
location: join(125008..125194,125303..125450,126320..126461,126617..126850,127423..127560)
location: region:125008-127560:1
so has part: feature:125008-125194:1:exon
so has part: feature:125303-125450:1:exon
so has part: feature:126320-126461:1:exon
so has part: feature:126617-126850:1:exon
so has part: feature:127423-127560:1:exon

XP_005019579.2
type: Protein
SIO_000068: ncbiprotein

position:125008:1
position: 125008
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:127560:1
position: 127560
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:125008-125194:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:125303-125450:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:126320-126461:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:126617-126850:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:127423-127560:1:exon

LOC119714217
type: Gene
subclass of: SO_0000704
RO_0002162: 8839
gene: LOC119714217
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(130290..133626)
location: region:130290-133626:-1
so has part: feature:130290-133626:-1:exon
subclass of: SO_0000011

119714217
type: Gene
SIO_000068: ncbigene

position:130290:-1
position: 130290
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:133626:-1
position: 133626
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:130290-133626:-1:exon

LOC119714217
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 8839
nc RNA class: lncRNA
gene: LOC119714217
product: uncharacterized LOC119714217
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 15 samples with support for all annotated introns
transcript id: XR_005261296.1
SIO_010081: LOC119714217
subclass of: SO_0000673
so part of: LOC119714217
location: complement(join(130290..131677,132070..133626))
location: region:130290-133626:-1
so has part: feature:132070-133626:-1:exon
so has part: feature:130290-131677:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:132070-133626:-1:exon

position:132070:-1
position: 132070
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:130290-131677:-1:exon

position:131677:-1
position: 131677
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

GNA11
type: Gene
subclass of: SO_0000704
RO_0002162: 8839
gene: GNA11
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(135539..150754)
location: region:135539-150754:-1
so has part: feature:135539-150754:-1:exon
subclass of: SO_0000010

101802177
type: Gene
SIO_000068: ncbigene

position:135539:-1
position: 135539
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:150754:-1
position: 150754
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:135539-150754:-1:exon

GNA11
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8839
gene: GNA11
product: G protein subunit alpha 11
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 47 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 126 samples with support for all annotated introns
transcript id: XM_027472572.2
SIO_010081: GNA11
subclass of: SO_0000673
so part of: GNA11
location: complement(join(135539..139864,141463..141616,142436..142565,143877..144005,144581..144735,146358..146542,150511..150754))
location: region:135539-150754:-1
so has part: feature:150511-150754:-1:exon
so has part: feature:146358-146542:-1:exon
so has part: feature:144581-144735:-1:exon
so has part: feature:143877-144005:-1:exon
so has part: feature:142436-142565:-1:exon
so has part: feature:141463-141616:-1:exon
so has part: feature:135539-139864:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:150511-150754:-1:exon

position:150511:-1
position: 150511
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:146358-146542:-1:exon

position:146358:-1
position: 146358
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:146542:-1
position: 146542
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:144581-144735:-1:exon

position:144581:-1
position: 144581
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:144735:-1
position: 144735
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:143877-144005:-1:exon

position:143877:-1
position: 143877
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:144005:-1
position: 144005
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:142436-142565:-1:exon

position:142436:-1
position: 142436
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:142565:-1
position: 142565
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:141463-141616:-1:exon

position:141463:-1
position: 141463
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:141616:-1
position: 141616
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:135539-139864:-1:exon

position:139864:-1
position: 139864
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

GNA11
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8839
gene: GNA11
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: guanine nucleotide-binding protein subunit alpha-11
translation: MTLESMMACCLSDEVKESKRINAEIEKQLRRDKRDARRELKLLLLGTGESGKSTFIKQMRIIHGSGYSEEDKKGFTKLVYQNIFTAMQSMIRAMETLKILYKYEQNKANAVLIREVDVEKVMTFEQPYVSAIKTLWNDPGIQECYDRRREYQLSDSAKYYLSDVDRIATPGYLPTQQDVLRVRVPTTGIIEYPFDLENIIFRMVDVGGQRSERRKWIHCFENVTSIMFLVALSEYDQVLVESDNENRMEESKALFRTIITYPWFQNSSVILFLNKKDLLEDKILYSHLVDYFPEFDGPQRDAQAAREFILKMFVDLNPDSDKIIYSHFTCATDTENIRFVFAAVKDTILQLNLKEYNLV
SIO_010081: GNA11
subclass of: SO_0000673
so part of: GNA11
location: complement(join(139674..139864,141463..141616,142436..142565,143877..144005,144581..144735,146358..146542,150511..150646))
location: region:139674-150646:-1
so has part: feature:150511-150646:-1:exon
so has part: feature:146358-146542:-1:exon
so has part: feature:144581-144735:-1:exon
so has part: feature:143877-144005:-1:exon
so has part: feature:142436-142565:-1:exon
so has part: feature:141463-141616:-1:exon
so has part: feature:139674-139864:-1:exon

XP_027328373.1
type: Protein
SIO_000068: ncbiprotein

position:139674:-1
position: 139674
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:150646:-1
position: 150646
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:150511-150646:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:146358-146542:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:144581-144735:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:143877-144005:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:142436-142565:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:141463-141616:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:139674-139864:-1:exon

TLE5
type: Gene
subclass of: SO_0000704
RO_0002162: 8839
gene: TLE5
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 161351..169884
location: region:161351-169884:1
so has part: feature:161351-169884:1:exon
subclass of: SO_0000010

110352711
type: Gene
SIO_000068: ncbigene

position:161351:1
position: 161351
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:169884:1
position: 169884
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:161351-169884:1:exon

TLE5
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8839
gene: TLE5
product: TLE family member 5, transcriptional modulator, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 111 samples with support for all annotated introns
transcript id: XM_038169295.1
SIO_010081: TLE5
subclass of: SO_0000673
so part of: TLE5
location: join(161351..161634,162065..162162,163334..163397,167317..167379,168213..168287,168837..169884)
location: region:161351-169884:1
so has part: feature:161351-161634:1:exon
so has part: feature:162065-162162:1:exon
so has part: feature:163334-163397:1:exon
so has part: feature:167317-167379:1:exon
so has part: feature:168213-168287:1:exon
so has part: feature:168837-169884:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:161351-161634:1:exon

position:161634:1
position: 161634
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:162065-162162:1:exon

position:162065:1
position: 162065
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:162162:1
position: 162162
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:163334-163397:1:exon

position:163334:1
position: 163334
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:163397:1
position: 163397
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:167317-167379:1:exon

position:167317:1
position: 167317
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:167379:1
position: 167379
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:168213-168287:1:exon

position:168213:1
position: 168213
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:168287:1
position: 168287
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:168837-169884:1:exon

position:168837:1
position: 168837
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

TLE5
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8839
gene: TLE5
product: TLE family member 5, transcriptional modulator, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 126 samples with support for all annotated introns
transcript id: XM_027472586.2
SIO_010081: TLE5
subclass of: SO_0000673
so part of: TLE5
location: join(161353..161634,162065..162162,163334..163397,165892..165936,167317..167379,168213..168287,168840..169884)
location: region:161353-169884:1
so has part: feature:161353-161634:1:exon
so has part: feature:162065-162162:1:exon
so has part: feature:163334-163397:1:exon
so has part: feature:165892-165936:1:exon
so has part: feature:167317-167379:1:exon
so has part: feature:168213-168287:1:exon
so has part: feature:168840-169884:1:exon

position:161353:1
position: 161353
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:161353-161634:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:162065-162162:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:163334-163397:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:165892-165936:1:exon

position:165892:1
position: 165892
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:165936:1
position: 165936
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:167317-167379:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:168213-168287:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:168840-169884:1:exon

position:168840:1
position: 168840
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

TLE5
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8839
gene: TLE5
product: TLE family member 5, transcriptional modulator, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 9 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 126 samples with support for all annotated introns
transcript id: XM_027472584.2
SIO_010081: TLE5
subclass of: SO_0000673
so part of: TLE5
location: join(161360..161634,162065..162162,163334..163397,165892..165936,167317..167379,168213..168287,168837..169884)
location: region:161360-169884:1
so has part: feature:161360-161634:1:exon
so has part: feature:162065-162162:1:exon
so has part: feature:163334-163397:1:exon
so has part: feature:165892-165936:1:exon
so has part: feature:167317-167379:1:exon
so has part: feature:168213-168287:1:exon
so has part: feature:168837-169884:1:exon

position:161360:1
position: 161360
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:161360-161634:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:162065-162162:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:163334-163397:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:165892-165936:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:167317-167379:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:168213-168287:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:168837-169884:1:exon

TLE5
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8839
gene: TLE5
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: TLE family member 5 isoform X1
translation: MMFPQSRHSGSSHLPQQLKFTTSDSCDRIKDEFQLLQAQYHSLKLECDKLASEKSEMQRHYVMYYEMSYGLNIEMHKQAEIVKRLNGICAQVLPYLSQEHQQQVLGAIERAKQVTAPELNSIIRQQLQAHQLSQLQALALPLTPLPVGLQPPSLPAVSAGSGLLSLSALGSQGHLTKEDKNGHDGDAHQDDDGEKSD
SIO_010081: TLE5
subclass of: SO_0000673
so part of: TLE5
location: join(161608..161634,162065..162162,163334..163397,165892..165936,167317..167379,168213..168287,168837..169058)
location: region:161608-169058:1
so has part: feature:161608-161634:1:exon
so has part: feature:162065-162162:1:exon
so has part: feature:163334-163397:1:exon
so has part: feature:165892-165936:1:exon
so has part: feature:167317-167379:1:exon
so has part: feature:168213-168287:1:exon
so has part: feature:168837-169058:1:exon

XP_027328385.1
type: Protein
SIO_000068: ncbiprotein

position:161608:1
position: 161608
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:169058:1
position: 169058
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:161608-161634:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:162065-162162:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:163334-163397:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:165892-165936:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:167317-167379:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:168213-168287:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:168837-169058:1:exon

TLE5
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8839
gene: TLE5
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: TLE family member 5 isoform X2
translation: MMFPQSRHSGSSHLPQQLKFTTSDSCDRIKDEFQLLQAQYHSLKLECDKLASEKSEMQRHYVMYYEMSYGLNIEMHKQAEIVKRLNGICAQVLPYLSQEHQQQVLGAIERAKQVTAPELNSIIRQLQAHQLSQLQALALPLTPLPVGLQPPSLPAVSAGSGLLSLSALGSQGHLTKEDKNGHDGDAHQDDDGEKSD
SIO_010081: TLE5
subclass of: SO_0000673
so part of: TLE5
location: join(161608..161634,162065..162162,163334..163397,165892..165936,167317..167379,168213..168287,168840..169058)
location: region:161608-169058:1
so has part: feature:161608-161634:1:exon
so has part: feature:162065-162162:1:exon
so has part: feature:163334-163397:1:exon
so has part: feature:165892-165936:1:exon
so has part: feature:167317-167379:1:exon
so has part: feature:168213-168287:1:exon
so has part: feature:168840-169058:1:exon

XP_027328387.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:161608-161634:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:162065-162162:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:163334-163397:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:165892-165936:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:167317-167379:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:168213-168287:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:168840-169058:1:exon

TLE5
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8839
gene: TLE5
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: TLE family member 5 isoform X3
translation: MMFPQSRHSGSSHLPQQLKFTTSDSCDRIKDEFQLLQAQYHSLKLECDKLASEKSEMQRHYVMAEIVKRLNGICAQVLPYLSQEHQQQVLGAIERAKQVTAPELNSIIRQQLQAHQLSQLQALALPLTPLPVGLQPPSLPAVSAGSGLLSLSALGSQGHLTKEDKNGHDGDAHQDDDGEKSD
SIO_010081: TLE5
subclass of: SO_0000673
so part of: TLE5
location: join(161608..161634,162065..162162,163334..163397,167317..167379,168213..168287,168837..169058)
location: region:161608-169058:1
so has part: feature:161608-161634:1:exon
so has part: feature:162065-162162:1:exon
so has part: feature:163334-163397:1:exon
so has part: feature:167317-167379:1:exon
so has part: feature:168213-168287:1:exon
so has part: feature:168837-169058:1:exon

XP_038025223.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:161608-161634:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:162065-162162:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:163334-163397:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:167317-167379:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:168213-168287:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:168837-169058:1:exon

TLE2
type: Gene
subclass of: SO_0000704
RO_0002162: 8839
gene: TLE2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 174327..184815
location: region:174327-184815:1
so has part: feature:174327-184815:1:exon
subclass of: SO_0000010

101804326
type: Gene
SIO_000068: ncbigene

position:174327:1
position: 174327
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:184815:1
position: 184815
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:174327-184815:1:exon

TLE2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8839
gene: TLE2
product: TLE family member 2, transcriptional corepressor, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 14 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 30 samples with support for all annotated introns
transcript id: XM_038169294.1
SIO_010081: TLE2
subclass of: SO_0000673
so part of: TLE2
location: join(174327..174356,174460..174557,174738..174801,175487..175531,177278..177340,177533..177607,178036..178225,179157..179173,179364..179465,179654..179698,180508..180657,181421..181550,182215..182375,182603..182679,182927..183176,183332..183579,183711..183858,183925..184075,184179..184255,184342..184815)
location: region:174327-184815:1
so has part: feature:174327-174356:1:exon
so has part: feature:174460-174557:1:exon
so has part: feature:174738-174801:1:exon
so has part: feature:175487-175531:1:exon
so has part: feature:177278-177340:1:exon
so has part: feature:177533-177607:1:exon
so has part: feature:178036-178225:1:exon
so has part: feature:179157-179173:1:exon
so has part: feature:179364-179465:1:exon
so has part: feature:179654-179698:1:exon
so has part: feature:180508-180657:1:exon
so has part: feature:181421-181550:1:exon
so has part: feature:182215-182375:1:exon
so has part: feature:182603-182679:1:exon
so has part: feature:182927-183176:1:exon
so has part: feature:183332-183579:1:exon
so has part: feature:183711-183858:1:exon
so has part: feature:183925-184075:1:exon
so has part: feature:184179-184255:1:exon
so has part: feature:184342-184815:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:174327-174356:1:exon

position:174356:1
position: 174356
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:174460-174557:1:exon

position:174460:1
position: 174460
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:174557:1
position: 174557
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:174738-174801:1:exon

position:174738:1
position: 174738
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:174801:1
position: 174801
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:175487-175531:1:exon

position:175487:1
position: 175487
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:175531:1
position: 175531
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:177278-177340:1:exon

position:177278:1
position: 177278
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:177340:1
position: 177340
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:177533-177607:1:exon

position:177533:1
position: 177533
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:177607:1
position: 177607
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:178036-178225:1:exon

position:178036:1
position: 178036
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:178225:1
position: 178225
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:179157-179173:1:exon

position:179157:1
position: 179157
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:179173:1
position: 179173
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:179364-179465:1:exon

position:179364:1
position: 179364
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:179465:1
position: 179465
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:179654-179698:1:exon

position:179654:1
position: 179654
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:179698:1
position: 179698
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:180508-180657:1:exon

position:180508:1
position: 180508
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:180657:1
position: 180657
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:181421-181550:1:exon

position:181421:1
position: 181421
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:181550:1
position: 181550
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:182215-182375:1:exon

position:182215:1
position: 182215
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:182375:1
position: 182375
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:182603-182679:1:exon

position:182603:1
position: 182603
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:182679:1
position: 182679
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:182927-183176:1:exon

position:182927:1
position: 182927
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:183176:1
position: 183176
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:183332-183579:1:exon

position:183332:1
position: 183332
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:183579:1
position: 183579
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:183711-183858:1:exon

position:183711:1
position: 183711
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:183858:1
position: 183858
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:183925-184075:1:exon

position:183925:1
position: 183925
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:184075:1
position: 184075
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:184179-184255:1:exon

position:184179:1
position: 184179
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:184255:1
position: 184255
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:184342-184815:1:exon

position:184342:1
position: 184342
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

TLE2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8839
gene: TLE2
product: TLE family member 2, transcriptional corepressor, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 11 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 30 samples with support for all annotated introns
transcript id: XM_027472555.2
SIO_010081: TLE2
subclass of: SO_0000673
so part of: TLE2
location: join(174327..174356,174460..174557,174738..174801,175487..175531,177278..177340,177533..177607,178039..178225,179157..179173,179364..179465,179654..179698,180508..180657,181421..181550,182215..182375,182603..182679,182927..183176,183332..183579,183711..183858,183925..184075,184179..184255,184342..184815)
location: region:174327-184815:1
so has part: feature:174327-174356:1:exon
so has part: feature:174460-174557:1:exon
so has part: feature:174738-174801:1:exon
so has part: feature:175487-175531:1:exon
so has part: feature:177278-177340:1:exon
so has part: feature:177533-177607:1:exon
so has part: feature:178039-178225:1:exon
so has part: feature:179157-179173:1:exon
so has part: feature:179364-179465:1:exon
so has part: feature:179654-179698:1:exon
so has part: feature:180508-180657:1:exon
so has part: feature:181421-181550:1:exon
so has part: feature:182215-182375:1:exon
so has part: feature:182603-182679:1:exon
so has part: feature:182927-183176:1:exon
so has part: feature:183332-183579:1:exon
so has part: feature:183711-183858:1:exon
so has part: feature:183925-184075:1:exon
so has part: feature:184179-184255:1:exon
so has part: feature:184342-184815:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:174327-174356:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:174460-174557:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:174738-174801:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:175487-175531:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:177278-177340:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:177533-177607:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:178039-178225:1:exon

position:178039:1
position: 178039
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:179157-179173:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:179364-179465:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:179654-179698:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:180508-180657:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:181421-181550:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:182215-182375:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:182603-182679:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:182927-183176:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:183332-183579:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:183711-183858:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:183925-184075:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:184179-184255:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:184342-184815:1:exon

TLE2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8839
gene: TLE2
product: TLE family member 2, transcriptional corepressor, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 9 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 13 samples with support for all annotated introns
transcript id: XM_027472556.2
SIO_010081: TLE2
subclass of: SO_0000673
so part of: TLE2
location: join(174327..174356,174460..174557,174738..174801,175487..175531,177278..177340,178036..178225,179157..179173,179364..179465,179654..179698,180508..180657,181421..181550,182215..182375,182603..182679,182927..183176,183332..183579,183711..183858,183925..184075,184179..184255,184342..184815)
location: region:174327-184815:1
so has part: feature:174327-174356:1:exon
so has part: feature:174460-174557:1:exon
so has part: feature:174738-174801:1:exon
so has part: feature:175487-175531:1:exon
so has part: feature:177278-177340:1:exon
so has part: feature:178036-178225:1:exon
so has part: feature:179157-179173:1:exon
so has part: feature:179364-179465:1:exon
so has part: feature:179654-179698:1:exon
so has part: feature:180508-180657:1:exon
so has part: feature:181421-181550:1:exon
so has part: feature:182215-182375:1:exon
so has part: feature:182603-182679:1:exon
so has part: feature:182927-183176:1:exon
so has part: feature:183332-183579:1:exon
so has part: feature:183711-183858:1:exon
so has part: feature:183925-184075:1:exon
so has part: feature:184179-184255:1:exon
so has part: feature:184342-184815:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:174327-174356:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:174460-174557:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:174738-174801:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:175487-175531:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:177278-177340:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:178036-178225:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:179157-179173:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:179364-179465:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:179654-179698:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:180508-180657:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:181421-181550:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:182215-182375:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:182603-182679:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:182927-183176:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:183332-183579:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:183711-183858:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:183925-184075:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:184179-184255:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:184342-184815:1:exon

TLE2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8839
gene: TLE2
product: TLE family member 2, transcriptional corepressor, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 10 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 57 samples with support for all annotated introns
transcript id: XM_027472557.2
SIO_010081: TLE2
subclass of: SO_0000673
so part of: TLE2
location: join(174340..174356,174738..174801,175487..175531,177278..177340,177533..177607,178036..178225,179157..179173,179364..179465,179654..179698,180508..180657,181421..181550,182215..182375,182603..182679,182927..183176,183332..183579,183711..183858,183925..184075,184179..184255,184342..184815)
location: region:174340-184815:1
so has part: feature:174340-174356:1:exon
so has part: feature:174738-174801:1:exon
so has part: feature:175487-175531:1:exon
so has part: feature:177278-177340:1:exon
so has part: feature:177533-177607:1:exon
so has part: feature:178036-178225:1:exon
so has part: feature:179157-179173:1:exon
so has part: feature:179364-179465:1:exon
so has part: feature:179654-179698:1:exon
so has part: feature:180508-180657:1:exon
so has part: feature:181421-181550:1:exon
so has part: feature:182215-182375:1:exon
so has part: feature:182603-182679:1:exon
so has part: feature:182927-183176:1:exon
so has part: feature:183332-183579:1:exon
so has part: feature:183711-183858:1:exon
so has part: feature:183925-184075:1:exon
so has part: feature:184179-184255:1:exon
so has part: feature:184342-184815:1:exon

position:174340:1
position: 174340
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:174340-174356:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:174738-174801:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:175487-175531:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:177278-177340:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:177533-177607:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:178036-178225:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:179157-179173:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:179364-179465:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:179654-179698:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:180508-180657:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:181421-181550:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:182215-182375:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:182603-182679:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:182927-183176:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:183332-183579:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:183711-183858:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:183925-184075:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:184179-184255:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:184342-184815:1:exon

TLE2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8839
gene: TLE2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: transducin-like enhancer protein 2 isoform X1
translation: MFPQPPPAPPSRPPKFSVPETCERLKEEFRLLQAQCHSLKLECEKLLSERTELQRHCVMYYEMSYGLNIEMHKQAEIVKRLHAICAQILPLLAQEHQQQVLQAVERAKQVTMAELNSIVGQQQLQQLSHHVPPVALTPHPSSVQLPSLAGASGAAGLLALSGALMVQSQLAAKEDRAQDGESREHSPGRSVSASPPESPPTEERTGGTGLKRKREERDPAGHDDSDGDKSDCNLVVDEDPRSESSSPGQAPSSQLPPARDVPQSPASGGASGASSQSGTPLRLQDQGLPDPPASTSSVSPPPRDALTPGLGPSSAALLRQPPAKAPAMDSTALRSPLSISSPFAASFGLLPHAALNGELTAPGMYVGIHLPPQVSSTVMYGRSPMVAFESHPHLRASALPASLCTVPAGKPAYSFHVSADGQMQPVPFPPDALLGSGIPRHARQLHTLAHGEVVCAVTISNSTRHVYTGGKGCVKVWDVGQPGTKTAVAQLDCLNRDNYIRSCKLLPDGRSLIVGGEASTLSIWDLAAPTPRIKAELTSSAPACYALAISPDAKVCFSCCSDGNIVVWDLQNQTMVRQFQGHTDGASCIDISNYGTKLWTGGLDNTVRCWDLREGRQLQQHDFSSQIFSLGHCPTGEWLAVGMESSNVEILHVSKPDKYQLHLHESCVLSLKFAACGKWFVSTGKDNLLNAWRTPYGASIFQSKESSSVLSCDISVNDKFIVTGSGDKKATVYEVVY
SIO_010081: TLE2
subclass of: SO_0000673
so part of: TLE2
location: join(174342..174356,174460..174557,174738..174801,175487..175531,177278..177340,177533..177607,178036..178225,179157..179173,179364..179465,179654..179698,180508..180657,181421..181550,182215..182375,182603..182679,182927..183176,183332..183579,183711..183858,183925..184075,184179..184255,184342..184449)
location: region:174342-184449:1
so has part: feature:174342-174356:1:exon
so has part: feature:174460-174557:1:exon
so has part: feature:174738-174801:1:exon
so has part: feature:175487-175531:1:exon
so has part: feature:177278-177340:1:exon
so has part: feature:177533-177607:1:exon
so has part: feature:178036-178225:1:exon
so has part: feature:179157-179173:1:exon
so has part: feature:179364-179465:1:exon
so has part: feature:179654-179698:1:exon
so has part: feature:180508-180657:1:exon
so has part: feature:181421-181550:1:exon
so has part: feature:182215-182375:1:exon
so has part: feature:182603-182679:1:exon
so has part: feature:182927-183176:1:exon
so has part: feature:183332-183579:1:exon
so has part: feature:183711-183858:1:exon
so has part: feature:183925-184075:1:exon
so has part: feature:184179-184255:1:exon
so has part: feature:184342-184449:1:exon

XP_038025222.1
type: Protein
SIO_000068: ncbiprotein

position:174342:1
position: 174342
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:184449:1
position: 184449
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:174342-174356:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:174460-174557:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:174738-174801:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:175487-175531:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:177278-177340:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:177533-177607:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:178036-178225:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:179157-179173:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:179364-179465:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:179654-179698:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:180508-180657:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:181421-181550:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:182215-182375:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:182603-182679:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:182927-183176:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:183332-183579:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:183711-183858:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:183925-184075:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:184179-184255:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:184342-184449:1:exon

TLE2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8839
gene: TLE2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: transducin-like enhancer protein 2 isoform X2
translation: MFPQPPPAPPSRPPKFSVPETCERLKEEFRLLQAQCHSLKLECEKLLSERTELQRHCVMYYEMSYGLNIEMHKQAEIVKRLHAICAQILPLLAQEHQQQVLQAVERAKQVTMAELNSIVGQQLQQLSHHVPPVALTPHPSSVQLPSLAGASGAAGLLALSGALMVQSQLAAKEDRAQDGESREHSPGRSVSASPPESPPTEERTGGTGLKRKREERDPAGHDDSDGDKSDCNLVVDEDPRSESSSPGQAPSSQLPPARDVPQSPASGGASGASSQSGTPLRLQDQGLPDPPASTSSVSPPPRDALTPGLGPSSAALLRQPPAKAPAMDSTALRSPLSISSPFAASFGLLPHAALNGELTAPGMYVGIHLPPQVSSTVMYGRSPMVAFESHPHLRASALPASLCTVPAGKPAYSFHVSADGQMQPVPFPPDALLGSGIPRHARQLHTLAHGEVVCAVTISNSTRHVYTGGKGCVKVWDVGQPGTKTAVAQLDCLNRDNYIRSCKLLPDGRSLIVGGEASTLSIWDLAAPTPRIKAELTSSAPACYALAISPDAKVCFSCCSDGNIVVWDLQNQTMVRQFQGHTDGASCIDISNYGTKLWTGGLDNTVRCWDLREGRQLQQHDFSSQIFSLGHCPTGEWLAVGMESSNVEILHVSKPDKYQLHLHESCVLSLKFAACGKWFVSTGKDNLLNAWRTPYGASIFQSKESSSVLSCDISVNDKFIVTGSGDKKATVYEVVY
SIO_010081: TLE2
subclass of: SO_0000673
so part of: TLE2
location: join(174342..174356,174460..174557,174738..174801,175487..175531,177278..177340,177533..177607,178039..178225,179157..179173,179364..179465,179654..179698,180508..180657,181421..181550,182215..182375,182603..182679,182927..183176,183332..183579,183711..183858,183925..184075,184179..184255,184342..184449)
location: region:174342-184449:1
so has part: feature:174342-174356:1:exon
so has part: feature:174460-174557:1:exon
so has part: feature:174738-174801:1:exon
so has part: feature:175487-175531:1:exon
so has part: feature:177278-177340:1:exon
so has part: feature:177533-177607:1:exon
so has part: feature:178039-178225:1:exon
so has part: feature:179157-179173:1:exon
so has part: feature:179364-179465:1:exon
so has part: feature:179654-179698:1:exon
so has part: feature:180508-180657:1:exon
so has part: feature:181421-181550:1:exon
so has part: feature:182215-182375:1:exon
so has part: feature:182603-182679:1:exon
so has part: feature:182927-183176:1:exon
so has part: feature:183332-183579:1:exon
so has part: feature:183711-183858:1:exon
so has part: feature:183925-184075:1:exon
so has part: feature:184179-184255:1:exon
so has part: feature:184342-184449:1:exon

XP_027328356.2
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:174342-174356:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:174460-174557:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:174738-174801:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:175487-175531:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:177278-177340:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:177533-177607:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:178039-178225:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:179157-179173:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:179364-179465:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:179654-179698:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:180508-180657:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:181421-181550:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:182215-182375:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:182603-182679:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:182927-183176:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:183332-183579:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:183711-183858:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:183925-184075:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:184179-184255:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:184342-184449:1:exon

TLE2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8839
gene: TLE2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: transducin-like enhancer protein 2 isoform X3
translation: MFPQPPPAPPSRPPKFSVPETCERLKEEFRLLQAQCHSLKLECEKLLSERTELQRHCVMYYEMSYGLNIEMHKQAEIVKRLHAICAQILPLLAQEQQQLQQLSHHVPPVALTPHPSSVQLPSLAGASGAAGLLALSGALMVQSQLAAKEDRAQDGESREHSPGRSVSASPPESPPTEERTGGTGLKRKREERDPAGHDDSDGDKSDCNLVVDEDPRSESSSPGQAPSSQLPPARDVPQSPASGGASGASSQSGTPLRLQDQGLPDPPASTSSVSPPPRDALTPGLGPSSAALLRQPPAKAPAMDSTALRSPLSISSPFAASFGLLPHAALNGELTAPGMYVGIHLPPQVSSTVMYGRSPMVAFESHPHLRASALPASLCTVPAGKPAYSFHVSADGQMQPVPFPPDALLGSGIPRHARQLHTLAHGEVVCAVTISNSTRHVYTGGKGCVKVWDVGQPGTKTAVAQLDCLNRDNYIRSCKLLPDGRSLIVGGEASTLSIWDLAAPTPRIKAELTSSAPACYALAISPDAKVCFSCCSDGNIVVWDLQNQTMVRQFQGHTDGASCIDISNYGTKLWTGGLDNTVRCWDLREGRQLQQHDFSSQIFSLGHCPTGEWLAVGMESSNVEILHVSKPDKYQLHLHESCVLSLKFAACGKWFVSTGKDNLLNAWRTPYGASIFQSKESSSVLSCDISVNDKFIVTGSGDKKATVYEVVY
SIO_010081: TLE2
subclass of: SO_0000673
so part of: TLE2
location: join(174342..174356,174460..174557,174738..174801,175487..175531,177278..177340,178036..178225,179157..179173,179364..179465,179654..179698,180508..180657,181421..181550,182215..182375,182603..182679,182927..183176,183332..183579,183711..183858,183925..184075,184179..184255,184342..184449)
location: region:174342-184449:1
so has part: feature:174342-174356:1:exon
so has part: feature:174460-174557:1:exon
so has part: feature:174738-174801:1:exon
so has part: feature:175487-175531:1:exon
so has part: feature:177278-177340:1:exon
so has part: feature:178036-178225:1:exon
so has part: feature:179157-179173:1:exon
so has part: feature:179364-179465:1:exon
so has part: feature:179654-179698:1:exon
so has part: feature:180508-180657:1:exon
so has part: feature:181421-181550:1:exon
so has part: feature:182215-182375:1:exon
so has part: feature:182603-182679:1:exon
so has part: feature:182927-183176:1:exon
so has part: feature:183332-183579:1:exon
so has part: feature:183711-183858:1:exon
so has part: feature:183925-184075:1:exon
so has part: feature:184179-184255:1:exon
so has part: feature:184342-184449:1:exon

XP_027328357.2
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:174342-174356:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:174460-174557:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:174738-174801:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:175487-175531:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:177278-177340:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:178036-178225:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:179157-179173:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:179364-179465:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:179654-179698:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:180508-180657:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:181421-181550:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:182215-182375:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:182603-182679:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:182927-183176:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:183332-183579:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:183711-183858:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:183925-184075:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:184179-184255:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:184342-184449:1:exon

TLE2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8839
gene: TLE2
product: TLE family member 2, transcriptional corepressor, transcript variant X5
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 10 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 73 samples with support for all annotated introns
transcript id: XM_027472558.2
SIO_010081: TLE2
subclass of: SO_0000673
so part of: TLE2
location: join(174487..174557,175487..175531,177278..177340,177533..177607,178036..178225,179157..179173,179364..179465,179654..179698,180508..180657,181421..181550,182215..182375,182603..182679,182927..183176,183332..183579,183711..183858,183925..184075,184179..184255,184342..184815)
location: region:174487-184815:1
so has part: feature:174487-174557:1:exon
so has part: feature:175487-175531:1:exon
so has part: feature:177278-177340:1:exon
so has part: feature:177533-177607:1:exon
so has part: feature:178036-178225:1:exon
so has part: feature:179157-179173:1:exon
so has part: feature:179364-179465:1:exon
so has part: feature:179654-179698:1:exon
so has part: feature:180508-180657:1:exon
so has part: feature:181421-181550:1:exon
so has part: feature:182215-182375:1:exon
so has part: feature:182603-182679:1:exon
so has part: feature:182927-183176:1:exon
so has part: feature:183332-183579:1:exon
so has part: feature:183711-183858:1:exon
so has part: feature:183925-184075:1:exon
so has part: feature:184179-184255:1:exon
so has part: feature:184342-184815:1:exon

position:174487:1
position: 174487
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:174487-174557:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:175487-175531:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:177278-177340:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:177533-177607:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:178036-178225:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:179157-179173:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:179364-179465:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:179654-179698:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:180508-180657:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:181421-181550:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:182215-182375:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:182603-182679:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:182927-183176:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:183332-183579:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:183711-183858:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:183925-184075:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:184179-184255:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:184342-184815:1:exon

TLE2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8839
gene: TLE2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: transducin-like enhancer protein 2 isoform X4
translation: MYYEMSYGLNIEMHKQAEIVKRLHAICAQILPLLAQEHQQQVLQAVERAKQVTMAELNSIVGQQQLQQLSHHVPPVALTPHPSSVQLPSLAGASGAAGLLALSGALMVQSQLAAKEDRAQDGESREHSPGRSVSASPPESPPTEERTGGTGLKRKREERDPAGHDDSDGDKSDCNLVVDEDPRSESSSPGQAPSSQLPPARDVPQSPASGGASGASSQSGTPLRLQDQGLPDPPASTSSVSPPPRDALTPGLGPSSAALLRQPPAKAPAMDSTALRSPLSISSPFAASFGLLPHAALNGELTAPGMYVGIHLPPQVSSTVMYGRSPMVAFESHPHLRASALPASLCTVPAGKPAYSFHVSADGQMQPVPFPPDALLGSGIPRHARQLHTLAHGEVVCAVTISNSTRHVYTGGKGCVKVWDVGQPGTKTAVAQLDCLNRDNYIRSCKLLPDGRSLIVGGEASTLSIWDLAAPTPRIKAELTSSAPACYALAISPDAKVCFSCCSDGNIVVWDLQNQTMVRQFQGHTDGASCIDISNYGTKLWTGGLDNTVRCWDLREGRQLQQHDFSSQIFSLGHCPTGEWLAVGMESSNVEILHVSKPDKYQLHLHESCVLSLKFAACGKWFVSTGKDNLLNAWRTPYGASIFQSKESSSVLSCDISVNDKFIVTGSGDKKATVYEVVY
SIO_010081: TLE2
subclass of: SO_0000673
so part of: TLE2
location: join(174799..174801,175487..175531,177278..177340,177533..177607,178036..178225,179157..179173,179364..179465,179654..179698,180508..180657,181421..181550,182215..182375,182603..182679,182927..183176,183332..183579,183711..183858,183925..184075,184179..184255,184342..184449)
location: region:174799-184449:1
so has part: feature:174799-174801:1:exon
so has part: feature:175487-175531:1:exon
so has part: feature:177278-177340:1:exon
so has part: feature:177533-177607:1:exon
so has part: feature:178036-178225:1:exon
so has part: feature:179157-179173:1:exon
so has part: feature:179364-179465:1:exon
so has part: feature:179654-179698:1:exon
so has part: feature:180508-180657:1:exon
so has part: feature:181421-181550:1:exon
so has part: feature:182215-182375:1:exon
so has part: feature:182603-182679:1:exon
so has part: feature:182927-183176:1:exon
so has part: feature:183332-183579:1:exon
so has part: feature:183711-183858:1:exon
so has part: feature:183925-184075:1:exon
so has part: feature:184179-184255:1:exon
so has part: feature:184342-184449:1:exon

XP_027328358.2
type: Protein
SIO_000068: ncbiprotein

position:174799:1
position: 174799
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:174799-174801:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:175487-175531:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:177278-177340:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:177533-177607:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:178036-178225:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:179157-179173:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:179364-179465:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:179654-179698:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:180508-180657:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:181421-181550:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:182215-182375:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:182603-182679:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:182927-183176:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:183332-183579:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:183711-183858:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:183925-184075:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:184179-184255:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:184342-184449:1:exon

TLE2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8839
gene: TLE2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: transducin-like enhancer protein 2 isoform X5
translation: MSYGLNIEMHKQAEIVKRLHAICAQILPLLAQEHQQQVLQAVERAKQVTMAELNSIVGQQQLQQLSHHVPPVALTPHPSSVQLPSLAGASGAAGLLALSGALMVQSQLAAKEDRAQDGESREHSPGRSVSASPPESPPTEERTGGTGLKRKREERDPAGHDDSDGDKSDCNLVVDEDPRSESSSPGQAPSSQLPPARDVPQSPASGGASGASSQSGTPLRLQDQGLPDPPASTSSVSPPPRDALTPGLGPSSAALLRQPPAKAPAMDSTALRSPLSISSPFAASFGLLPHAALNGELTAPGMYVGIHLPPQVSSTVMYGRSPMVAFESHPHLRASALPASLCTVPAGKPAYSFHVSADGQMQPVPFPPDALLGSGIPRHARQLHTLAHGEVVCAVTISNSTRHVYTGGKGCVKVWDVGQPGTKTAVAQLDCLNRDNYIRSCKLLPDGRSLIVGGEASTLSIWDLAAPTPRIKAELTSSAPACYALAISPDAKVCFSCCSDGNIVVWDLQNQTMVRQFQGHTDGASCIDISNYGTKLWTGGLDNTVRCWDLREGRQLQQHDFSSQIFSLGHCPTGEWLAVGMESSNVEILHVSKPDKYQLHLHESCVLSLKFAACGKWFVSTGKDNLLNAWRTPYGASIFQSKESSSVLSCDISVNDKFIVTGSGDKKATVYEVVY
SIO_010081: TLE2
subclass of: SO_0000673
so part of: TLE2
location: join(175496..175531,177278..177340,177533..177607,178036..178225,179157..179173,179364..179465,179654..179698,180508..180657,181421..181550,182215..182375,182603..182679,182927..183176,183332..183579,183711..183858,183925..184075,184179..184255,184342..184449)
location: region:175496-184449:1
so has part: feature:175496-175531:1:exon
so has part: feature:177278-177340:1:exon
so has part: feature:177533-177607:1:exon
so has part: feature:178036-178225:1:exon
so has part: feature:179157-179173:1:exon
so has part: feature:179364-179465:1:exon
so has part: feature:179654-179698:1:exon
so has part: feature:180508-180657:1:exon
so has part: feature:181421-181550:1:exon
so has part: feature:182215-182375:1:exon
so has part: feature:182603-182679:1:exon
so has part: feature:182927-183176:1:exon
so has part: feature:183332-183579:1:exon
so has part: feature:183711-183858:1:exon
so has part: feature:183925-184075:1:exon
so has part: feature:184179-184255:1:exon
so has part: feature:184342-184449:1:exon

XP_027328359.2
type: Protein
SIO_000068: ncbiprotein

position:175496:1
position: 175496
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:175496-175531:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:177278-177340:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:177533-177607:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:178036-178225:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:179157-179173:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:179364-179465:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:179654-179698:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:180508-180657:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:181421-181550:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:182215-182375:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:182603-182679:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:182927-183176:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:183332-183579:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:183711-183858:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:183925-184075:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:184179-184255:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:184342-184449:1:exon

LOC101804149
type: Gene
subclass of: SO_0000704
RO_0002162: 8839
gene: LOC101804149
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(185202..195109)
location: region:185202-195109:-1
so has part: feature:185202-195109:-1:exon
subclass of: SO_0000010

101804149
type: Gene
SIO_000068: ncbigene

position:185202:-1
position: 185202
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:195109:-1
position: 195109
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:185202-195109:-1:exon

LOC101804149
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8839
gene: LOC101804149
product: transducin-like enhancer protein 1, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 9 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 107 samples with support for all annotated introns
transcript id: XM_027472553.2
SIO_010081: LOC101804149
subclass of: SO_0000673
so part of: LOC101804149
location: complement(join(185202..185700,185853..185929,186168..186318,186385..186532,186635..186882,187038..187287,187505..187581,187654..187838,187945..188074,188331..188486,188684..188728,188846..188950,189196..189212,189478..189673,190228..190269,190380..190442,192507..192551,192892..192955,193625..193773,194390..194507,194939..195109))
location: region:185202-195109:-1
so has part: feature:194939-195109:-1:exon
so has part: feature:194390-194507:-1:exon
so has part: feature:193625-193773:-1:exon
so has part: feature:192892-192955:-1:exon
so has part: feature:192507-192551:-1:exon
so has part: feature:190380-190442:-1:exon
so has part: feature:190228-190269:-1:exon
so has part: feature:189478-189673:-1:exon
so has part: feature:189196-189212:-1:exon
so has part: feature:188846-188950:-1:exon
so has part: feature:188684-188728:-1:exon
so has part: feature:188331-188486:-1:exon
so has part: feature:187945-188074:-1:exon
so has part: feature:187654-187838:-1:exon
so has part: feature:187505-187581:-1:exon
so has part: feature:187038-187287:-1:exon
so has part: feature:186635-186882:-1:exon
so has part: feature:186385-186532:-1:exon
so has part: feature:186168-186318:-1:exon
so has part: feature:185853-185929:-1:exon
so has part: feature:185202-185700:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:194939-195109:-1:exon

position:194939:-1
position: 194939
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:194390-194507:-1:exon

position:194390:-1
position: 194390
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:194507:-1
position: 194507
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:193625-193773:-1:exon

position:193625:-1
position: 193625
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:193773:-1
position: 193773
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:192892-192955:-1:exon

position:192892:-1
position: 192892
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:192955:-1
position: 192955
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:192507-192551:-1:exon

position:192507:-1
position: 192507
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:192551:-1
position: 192551
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:190380-190442:-1:exon

position:190380:-1
position: 190380
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:190442:-1
position: 190442
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:190228-190269:-1:exon

position:190228:-1
position: 190228
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:190269:-1
position: 190269
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:189478-189673:-1:exon

position:189478:-1
position: 189478
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:189673:-1
position: 189673
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:189196-189212:-1:exon

position:189196:-1
position: 189196
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:189212:-1
position: 189212
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:188846-188950:-1:exon

position:188846:-1
position: 188846
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:188950:-1
position: 188950
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:188684-188728:-1:exon

position:188684:-1
position: 188684
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:188728:-1
position: 188728
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:188331-188486:-1:exon

position:188331:-1
position: 188331
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:188486:-1
position: 188486
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:187945-188074:-1:exon

position:187945:-1
position: 187945
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:188074:-1
position: 188074
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:187654-187838:-1:exon

position:187654:-1
position: 187654
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:187838:-1
position: 187838
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:187505-187581:-1:exon

position:187505:-1
position: 187505
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:187581:-1
position: 187581
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:187038-187287:-1:exon

position:187038:-1
position: 187038
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:187287:-1
position: 187287
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:186635-186882:-1:exon

position:186635:-1
position: 186635
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:186882:-1
position: 186882
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:186385-186532:-1:exon

position:186385:-1
position: 186385
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:186532:-1
position: 186532
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:186168-186318:-1:exon

position:186168:-1
position: 186168
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:186318:-1
position: 186318
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:185853-185929:-1:exon

position:185853:-1
position: 185853
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:185929:-1
position: 185929
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:185202-185700:-1:exon

position:185700:-1
position: 185700
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC101804149
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8839
gene: LOC101804149
product: transducin-like enhancer protein 1, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 21 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 115 samples with support for all annotated introns
transcript id: XM_027472552.2
SIO_010081: LOC101804149
subclass of: SO_0000673
so part of: LOC101804149
location: complement(join(185202..185700,185853..185929,186168..186318,186385..186532,186635..186882,187038..187287,187505..187581,187654..187838,187945..188074,188331..188486,188684..188728,188846..188950,189196..189212,189478..189673,190195..190269,190380..190442,192507..192551,192892..192955,193625..193773,194390..194507,194939..195108))
location: region:185202-195108:-1
so has part: feature:194939-195108:-1:exon
so has part: feature:194390-194507:-1:exon
so has part: feature:193625-193773:-1:exon
so has part: feature:192892-192955:-1:exon
so has part: feature:192507-192551:-1:exon
so has part: feature:190380-190442:-1:exon
so has part: feature:190195-190269:-1:exon
so has part: feature:189478-189673:-1:exon
so has part: feature:189196-189212:-1:exon
so has part: feature:188846-188950:-1:exon
so has part: feature:188684-188728:-1:exon
so has part: feature:188331-188486:-1:exon
so has part: feature:187945-188074:-1:exon
so has part: feature:187654-187838:-1:exon
so has part: feature:187505-187581:-1:exon
so has part: feature:187038-187287:-1:exon
so has part: feature:186635-186882:-1:exon
so has part: feature:186385-186532:-1:exon
so has part: feature:186168-186318:-1:exon
so has part: feature:185853-185929:-1:exon
so has part: feature:185202-185700:-1:exon

position:195108:-1
position: 195108
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:194939-195108:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:194390-194507:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:193625-193773:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:192892-192955:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:192507-192551:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:190380-190442:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:190195-190269:-1:exon

position:190195:-1
position: 190195
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:189478-189673:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:189196-189212:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:188846-188950:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:188684-188728:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:188331-188486:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:187945-188074:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:187654-187838:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:187505-187581:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:187038-187287:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:186635-186882:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:186385-186532:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:186168-186318:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:185853-185929:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:185202-185700:-1:exon

LOC101804149
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8839
gene: LOC101804149
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: transducin-like enhancer protein 1 isoform X2
translation: MFPQNRPPAHLQAPSAASGTAVTAGAIPATPQSLKLTYPETLDRIKEEFQFLQNQYHSLKLECEKLATEKTEIQRHYVMYYEMSYGLNIEMHKQTEIAKRLNVICAQLIPFLSQEHQQQVVQAVERAKQHQLQTQHLSHHVPPIPLTPHPSGMQPAGLASLGSASGLLALSGALGAQAQLLAKDDRGVHDAEHRERDPGPSSLALPNGERARAISEYLSNSKKRKVEEKDFVTDYGSDADKSEDNLVVDEDPSSPHSVHSYSSRENGVEKLPLGRKEAVPLSPTSMASSSSASPSRSKDVPTVEKAGTPSLKSSTPTSQGDAATPGSSSAQQFRPAAPKAPVDPLALGLRTPLGVQSPYSATFGMAHPAVNGDMAGAGAYASLHLVSPQLNGAAAAVGAGSYGRSPLVGYDPHPHMRVPGLAAGMQVGTSGKPAYSFHVSADGQMQPVPFPPDALLGSGIPRHARQLHTLAHGEVVCAVTISNSTRHVYTGGKGCVKVWDVGQPGTKTAVAQLDCLNRDNYIRSCKLLPDGRSLIVGGEASTLSIWDLAAPTPRIKAELTSSAPACYALAISPDAKVCFSCCSDGNIVVWDLQNQTLVRQFQGHTDGASCIDISNDGTKLWTGGLDNTVRCWDLREGRQLQQHDFSSQIFSLGHCPTGEWLAVGMESSNVEILHVSKPDKYQLHLHESCVLSLKFAACGKWFVSTGKDNLLNAWRTPYGASIFQSKETSSVLSCDVSTDDQFIVTGSGDKKATVYEVIY
SIO_010081: LOC101804149
subclass of: SO_0000673
so part of: LOC101804149
location: complement(join(185593..185700,185853..185929,186168..186318,186385..186532,186635..186882,187038..187287,187505..187581,187654..187838,187945..188074,188331..188486,188684..188728,188846..188950,189196..189212,189478..189673,190228..190269,190380..190442,192507..192551,192892..192955,193625..193773,194390..194413))
location: region:185593-194413:-1
so has part: feature:194390-194413:-1:exon
so has part: feature:193625-193773:-1:exon
so has part: feature:192892-192955:-1:exon
so has part: feature:192507-192551:-1:exon
so has part: feature:190380-190442:-1:exon
so has part: feature:190228-190269:-1:exon
so has part: feature:189478-189673:-1:exon
so has part: feature:189196-189212:-1:exon
so has part: feature:188846-188950:-1:exon
so has part: feature:188684-188728:-1:exon
so has part: feature:188331-188486:-1:exon
so has part: feature:187945-188074:-1:exon
so has part: feature:187654-187838:-1:exon
so has part: feature:187505-187581:-1:exon
so has part: feature:187038-187287:-1:exon
so has part: feature:186635-186882:-1:exon
so has part: feature:186385-186532:-1:exon
so has part: feature:186168-186318:-1:exon
so has part: feature:185853-185929:-1:exon
so has part: feature:185593-185700:-1:exon

XP_027328354.2
type: Protein
SIO_000068: ncbiprotein

position:185593:-1
position: 185593
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:194413:-1
position: 194413
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:194390-194413:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:193625-193773:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:192892-192955:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:192507-192551:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:190380-190442:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:190228-190269:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:189478-189673:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:189196-189212:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:188846-188950:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:188684-188728:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:188331-188486:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:187945-188074:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:187654-187838:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:187505-187581:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:187038-187287:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:186635-186882:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:186385-186532:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:186168-186318:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:185853-185929:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:185593-185700:-1:exon

LOC101804149
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8839
gene: LOC101804149
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: transducin-like enhancer protein 1 isoform X1
translation: MFPQNRPPAHLQAPSAASGTAVTAGAIPATPQSLKLTYPETLDRIKEEFQFLQNQYHSLKLECEKLATEKTEIQRHYVMYYEMSYGLNIEMHKQTEIAKRLNVICAQLIPFLSQEHQQQVVQAVERAKQVTMTDLNAAIGHQLQTQHLSHHVPPIPLTPHPSGMQPAGLASLGSASGLLALSGALGAQAQLLAKDDRGVHDAEHRERDPGPSSLALPNGERARAISEYLSNSKKRKVEEKDFVTDYGSDADKSEDNLVVDEDPSSPHSVHSYSSRENGVEKLPLGRKEAVPLSPTSMASSSSASPSRSKDVPTVEKAGTPSLKSSTPTSQGDAATPGSSSAQQFRPAAPKAPVDPLALGLRTPLGVQSPYSATFGMAHPAVNGDMAGAGAYASLHLVSPQLNGAAAAVGAGSYGRSPLVGYDPHPHMRVPGLAAGMQVGTSGKPAYSFHVSADGQMQPVPFPPDALLGSGIPRHARQLHTLAHGEVVCAVTISNSTRHVYTGGKGCVKVWDVGQPGTKTAVAQLDCLNRDNYIRSCKLLPDGRSLIVGGEASTLSIWDLAAPTPRIKAELTSSAPACYALAISPDAKVCFSCCSDGNIVVWDLQNQTLVRQFQGHTDGASCIDISNDGTKLWTGGLDNTVRCWDLREGRQLQQHDFSSQIFSLGHCPTGEWLAVGMESSNVEILHVSKPDKYQLHLHESCVLSLKFAACGKWFVSTGKDNLLNAWRTPYGASIFQSKETSSVLSCDVSTDDQFIVTGSGDKKATVYEVIY
SIO_010081: LOC101804149
subclass of: SO_0000673
so part of: LOC101804149
location: complement(join(185593..185700,185853..185929,186168..186318,186385..186532,186635..186882,187038..187287,187505..187581,187654..187838,187945..188074,188331..188486,188684..188728,188846..188950,189196..189212,189478..189673,190195..190269,190380..190442,192507..192551,192892..192955,193625..193773,194390..194413))
location: region:185593-194413:-1
so has part: feature:194390-194413:-1:exon
so has part: feature:193625-193773:-1:exon
so has part: feature:192892-192955:-1:exon
so has part: feature:192507-192551:-1:exon
so has part: feature:190380-190442:-1:exon
so has part: feature:190195-190269:-1:exon
so has part: feature:189478-189673:-1:exon
so has part: feature:189196-189212:-1:exon
so has part: feature:188846-188950:-1:exon
so has part: feature:188684-188728:-1:exon
so has part: feature:188331-188486:-1:exon
so has part: feature:187945-188074:-1:exon
so has part: feature:187654-187838:-1:exon
so has part: feature:187505-187581:-1:exon
so has part: feature:187038-187287:-1:exon
so has part: feature:186635-186882:-1:exon
so has part: feature:186385-186532:-1:exon
so has part: feature:186168-186318:-1:exon
so has part: feature:185853-185929:-1:exon
so has part: feature:185593-185700:-1:exon

XP_027328353.2
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:194390-194413:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:193625-193773:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:192892-192955:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:192507-192551:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:190380-190442:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:190195-190269:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:189478-189673:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:189196-189212:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:188846-188950:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:188684-188728:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:188331-188486:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:187945-188074:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:187654-187838:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:187505-187581:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:187038-187287:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:186635-186882:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:186385-186532:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:186168-186318:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:185853-185929:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:185593-185700:-1:exon

LOC119714241
type: Gene
subclass of: SO_0000704
RO_0002162: 8839
gene: LOC119714241
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 195712..197116
location: region:195712-197116:1
so has part: feature:195712-197116:1:exon
subclass of: SO_0000011

119714241
type: Gene
SIO_000068: ncbigene

position:195712:1
position: 195712
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:197116:1
position: 197116
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:195712-197116:1:exon

LOC119714241
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 8839
nc RNA class: lncRNA
gene: LOC119714241
product: uncharacterized LOC119714241
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 32 samples with support for all annotated introns
transcript id: XR_005261332.1
SIO_010081: LOC119714241
subclass of: SO_0000673
so part of: LOC119714241
location: join(195712..195847,196335..197116)
location: region:195712-197116:1
so has part: feature:195712-195847:1:exon
so has part: feature:196335-197116:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:195712-195847:1:exon

position:195847:1
position: 195847
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:196335-197116:1:exon

position:196335:1
position: 196335
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

PLPP2
type: Gene
subclass of: SO_0000704
RO_0002162: 8839
gene: PLPP2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(201124..205568)
location: region:201124-205568:-1
so has part: feature:201124-205568:-1:exon
subclass of: SO_0000010

101801518
type: Gene
SIO_000068: ncbigene

position:201124:-1
position: 201124
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:205568:-1
position: 205568
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:201124-205568:-1:exon

PLPP2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8839
gene: PLPP2
product: phospholipid phosphatase 2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 14 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 126 samples with support for all annotated introns
transcript id: XM_027472574.2
SIO_010081: PLPP2
subclass of: SO_0000673
so part of: PLPP2
location: complement(join(201124..202103,202283..202459,202536..202593,202727..203004,203235..203386,205400..205568))
location: region:201124-205568:-1
so has part: feature:205400-205568:-1:exon
so has part: feature:203235-203386:-1:exon
so has part: feature:202727-203004:-1:exon
so has part: feature:202536-202593:-1:exon
so has part: feature:202283-202459:-1:exon
so has part: feature:201124-202103:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:205400-205568:-1:exon

position:205400:-1
position: 205400
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:203235-203386:-1:exon

position:203235:-1
position: 203235
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:203386:-1
position: 203386
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:202727-203004:-1:exon

position:202727:-1
position: 202727
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:203004:-1
position: 203004
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:202536-202593:-1:exon

position:202536:-1
position: 202536
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:202593:-1
position: 202593
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:202283-202459:-1:exon

position:202283:-1
position: 202283
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:202459:-1
position: 202459
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:201124-202103:-1:exon

position:202103:-1
position: 202103
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

PLPP2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8839
gene: PLPP2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: phospholipid phosphatase 2
translation: MERRKVFVALDVLCVVVASLPFVILTLVNSPYKRGFYCNDDSIRYPYKADTITHGLMAGVTITCTVLIISSGEAYLVYTERLYSKSEFNNYLAALYKVVGTFLFGGAISQSLTDLAKYMIGRLRPNFLAVCNPDWSRVNCSTYVQLENICRGEGRDVTESRLSFYSGHSSFGMYCMMFLALYVQARLVGKWARLLRPTIQFFLIAFAIYVGYTRVSDYKHHWSDVLAGLLQGALIAVLIVRYVSDFFKHRPPLPCDRQDPERRPSLPLTRSDLEHNHYSYRGTP
SIO_010081: PLPP2
subclass of: SO_0000673
so part of: PLPP2
location: complement(join(201966..202103,202283..202459,202536..202593,202727..203004,203235..203386,205400..205451))
location: region:201966-205451:-1
so has part: feature:205400-205451:-1:exon
so has part: feature:203235-203386:-1:exon
so has part: feature:202727-203004:-1:exon
so has part: feature:202536-202593:-1:exon
so has part: feature:202283-202459:-1:exon
so has part: feature:201966-202103:-1:exon

XP_027328375.1
type: Protein
SIO_000068: ncbiprotein

position:201966:-1
position: 201966
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:205451:-1
position: 205451
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:205400-205451:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:203235-203386:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:202727-203004:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:202536-202593:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:202283-202459:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:201966-202103:-1:exon

MIER2
type: Gene
subclass of: SO_0000704
RO_0002162: 8839
gene: MIER2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(208114..224102)
location: region:208114-224102:-1
so has part: feature:208114-224102:-1:exon
subclass of: SO_0000010

101801711
type: Gene
SIO_000068: ncbigene

position:208114:-1
position: 208114
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:224102:-1
position: 224102
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:208114-224102:-1:exon

MIER2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8839
gene: MIER2
product: MIER family member 2, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 7 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 95 samples with support for all annotated introns
transcript id: XM_027472565.2
SIO_010081: MIER2
subclass of: SO_0000673
so part of: MIER2
location: complement(join(208114..211255,211826..211962,212940..213067,213868..213962,214060..214141,214890..215041,216678..216747,217422..217531,218182..218305,218954..219079,219822..219973,220528..220615,221184..221312,224050..224102))
location: region:208114-224102:-1
so has part: feature:224050-224102:-1:exon
so has part: feature:221184-221312:-1:exon
so has part: feature:220528-220615:-1:exon
so has part: feature:219822-219973:-1:exon
so has part: feature:218954-219079:-1:exon
so has part: feature:218182-218305:-1:exon
so has part: feature:217422-217531:-1:exon
so has part: feature:216678-216747:-1:exon
so has part: feature:214890-215041:-1:exon
so has part: feature:214060-214141:-1:exon
so has part: feature:213868-213962:-1:exon
so has part: feature:212940-213067:-1:exon
so has part: feature:211826-211962:-1:exon
so has part: feature:208114-211255:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:224050-224102:-1:exon

position:224050:-1
position: 224050
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:221184-221312:-1:exon

position:221184:-1
position: 221184
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:221312:-1
position: 221312
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:220528-220615:-1:exon

position:220528:-1
position: 220528
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:220615:-1
position: 220615
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:219822-219973:-1:exon

position:219822:-1
position: 219822
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:219973:-1
position: 219973
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:218954-219079:-1:exon

position:218954:-1
position: 218954
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:219079:-1
position: 219079
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:218182-218305:-1:exon

position:218182:-1
position: 218182
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:218305:-1
position: 218305
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:217422-217531:-1:exon

position:217422:-1
position: 217422
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:217531:-1
position: 217531
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:216678-216747:-1:exon

position:216678:-1
position: 216678
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:216747:-1
position: 216747
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:214890-215041:-1:exon

position:214890:-1
position: 214890
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:215041:-1
position: 215041
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:214060-214141:-1:exon

position:214060:-1
position: 214060
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:214141:-1
position: 214141
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:213868-213962:-1:exon

position:213868:-1
position: 213868
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:213962:-1
position: 213962
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:212940-213067:-1:exon

position:212940:-1
position: 212940
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:213067:-1
position: 213067
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:211826-211962:-1:exon

position:211826:-1
position: 211826
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:211962:-1
position: 211962
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:208114-211255:-1:exon

position:211255:-1
position: 211255
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

MIER2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8839
gene: MIER2
product: MIER family member 2, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 8 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 121 samples with support for all annotated introns
transcript id: XM_027472563.2
SIO_010081: MIER2
subclass of: SO_0000673
so part of: MIER2
location: complement(join(208114..211255,211826..211962,212940..213067,213868..213962,214060..214141,214890..215041,216678..216747,217422..217531,218182..218305,218954..219079,219822..219973,220528..220615,224050..224096))
location: region:208114-224096:-1
so has part: feature:224050-224096:-1:exon
so has part: feature:220528-220615:-1:exon
so has part: feature:219822-219973:-1:exon
so has part: feature:218954-219079:-1:exon
so has part: feature:218182-218305:-1:exon
so has part: feature:217422-217531:-1:exon
so has part: feature:216678-216747:-1:exon
so has part: feature:214890-215041:-1:exon
so has part: feature:214060-214141:-1:exon
so has part: feature:213868-213962:-1:exon
so has part: feature:212940-213067:-1:exon
so has part: feature:211826-211962:-1:exon
so has part: feature:208114-211255:-1:exon

position:224096:-1
position: 224096
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:224050-224096:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:220528-220615:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:219822-219973:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:218954-219079:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:218182-218305:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:217422-217531:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:216678-216747:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:214890-215041:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:214060-214141:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:213868-213962:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:212940-213067:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:211826-211962:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:208114-211255:-1:exon

MIER2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8839
gene: MIER2
product: MIER family member 2, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 7 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 114 samples with support for all annotated introns
transcript id: XM_021272420.3
SIO_010081: MIER2
subclass of: SO_0000673
so part of: MIER2
location: complement(join(208114..211255,211826..211962,212940..213067,213868..213962,214060..214141,214890..215041,216678..216747,217422..217531,218182..218305,218954..219079,219822..219973,220528..220615,221184..223399))
location: region:208114-223399:-1
so has part: feature:221184-223399:-1:exon
so has part: feature:220528-220615:-1:exon
so has part: feature:219822-219973:-1:exon
so has part: feature:218954-219079:-1:exon
so has part: feature:218182-218305:-1:exon
so has part: feature:217422-217531:-1:exon
so has part: feature:216678-216747:-1:exon
so has part: feature:214890-215041:-1:exon
so has part: feature:214060-214141:-1:exon
so has part: feature:213868-213962:-1:exon
so has part: feature:212940-213067:-1:exon
so has part: feature:211826-211962:-1:exon
so has part: feature:208114-211255:-1:exon

position:223399:-1
position: 223399
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:221184-223399:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:220528-220615:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:219822-219973:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:218954-219079:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:218182-218305:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:217422-217531:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:216678-216747:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:214890-215041:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:214060-214141:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:213868-213962:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:212940-213067:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:211826-211962:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:208114-211255:-1:exon

MIER2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8839
gene: MIER2
product: MIER family member 2, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 122 samples with support for all annotated introns
transcript id: XM_027472564.2
SIO_010081: MIER2
subclass of: SO_0000673
so part of: MIER2
location: complement(join(208114..211255,211826..211962,212964..213067,213868..213962,214060..214141,214890..215041,216678..216747,217422..217531,218182..218305,218954..219079,219822..219973,220528..220615))
location: region:208114-220615:-1
so has part: feature:220528-220615:-1:exon
so has part: feature:219822-219973:-1:exon
so has part: feature:218954-219079:-1:exon
so has part: feature:218182-218305:-1:exon
so has part: feature:217422-217531:-1:exon
so has part: feature:216678-216747:-1:exon
so has part: feature:214890-215041:-1:exon
so has part: feature:214060-214141:-1:exon
so has part: feature:213868-213962:-1:exon
so has part: feature:212964-213067:-1:exon
so has part: feature:211826-211962:-1:exon
so has part: feature:208114-211255:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:220528-220615:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:219822-219973:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:218954-219079:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:218182-218305:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:217422-217531:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:216678-216747:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:214890-215041:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:214060-214141:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:213868-213962:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:212964-213067:-1:exon

position:212964:-1
position: 212964
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:211826-211962:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:208114-211255:-1:exon

MIER2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8839
gene: MIER2
product: MIER family member 2, transcript variant X5
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 99 samples with support for all annotated introns
transcript id: XM_021272422.3
SIO_010081: MIER2
subclass of: SO_0000673
so part of: MIER2
location: complement(join(208114..211255,211826..211962,212940..213067,213868..213962,214060..214141,214890..215041,216678..216747,217422..217531,218182..218305,218954..219074,219822..219961))
location: region:208114-219961:-1
so has part: feature:219822-219961:-1:exon
so has part: feature:218954-219074:-1:exon
so has part: feature:218182-218305:-1:exon
so has part: feature:217422-217531:-1:exon
so has part: feature:216678-216747:-1:exon
so has part: feature:214890-215041:-1:exon
so has part: feature:214060-214141:-1:exon
so has part: feature:213868-213962:-1:exon
so has part: feature:212940-213067:-1:exon
so has part: feature:211826-211962:-1:exon
so has part: feature:208114-211255:-1:exon

position:219961:-1
position: 219961
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:219822-219961:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:218954-219074:-1:exon

position:219074:-1
position: 219074
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:218182-218305:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:217422-217531:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:216678-216747:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:214890-215041:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:214060-214141:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:213868-213962:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:212940-213067:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:211826-211962:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:208114-211255:-1:exon

MIER2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8839
gene: MIER2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: mesoderm induction early response protein 2 isoform X2
translation: MAEASVGRQSPRVVPYPAHSLCPGEPGLQSAAVVSMGSADHRLNLAEILSQNYGVREEREEEEDTQEKQKSLEELEKSFSASQNSEMPFEELLALYGYEASDPISEQDSESNDITPNLPDMTLDKEQIAKDLLSGEEEEETQSSADDLTPSVTSHDASDLFPNQPGSNNFLADEDKEPCSSPCASSMAEDSEEDSIPSNECKKEIMVGPQYQATVPILHLNRHSEKAYENEDQLLWDPNILPEREVEEFLYCAVKRRWDELSSSSLPEGEMVKDNEQALYELVKCNFNAEEALRRLRFNVKVIRDELCAWSEEECRNFEHGYRVHGKNFHLIQANKVRTRSVGECVEYYYMWKKSERYEYFTQQTRLGRKKYVLHPGATDYADNDLDGGEVENASRSRSSPPIPSATSCLDSHFGQDQLAIESTEPLSVESTACSLGSMSESGQGYECSTPSETNCSFDPAEETSSGTLSASCTRHPVTPSDTGLYALPPAGPGLAEKQETLQSSGETITMDFTLPADINEGLPLIAGPVDLDRDTEAVVAPAQVSLSVTDFGLIGIGDVNSFLTAHQACPAPVARSEPLSQ
SIO_010081: MIER2
subclass of: SO_0000673
so part of: MIER2
location: complement(join(210780..211255,211826..211962,212940..213067,213868..213962,214060..214141,214890..215041,216678..216747,217422..217531,218182..218305,218954..219079,219822..219973,220528..220615,224050..224058))
location: region:210780-224058:-1
so has part: feature:224050-224058:-1:exon
so has part: feature:220528-220615:-1:exon
so has part: feature:219822-219973:-1:exon
so has part: feature:218954-219079:-1:exon
so has part: feature:218182-218305:-1:exon
so has part: feature:217422-217531:-1:exon
so has part: feature:216678-216747:-1:exon
so has part: feature:214890-215041:-1:exon
so has part: feature:214060-214141:-1:exon
so has part: feature:213868-213962:-1:exon
so has part: feature:212940-213067:-1:exon
so has part: feature:211826-211962:-1:exon
so has part: feature:210780-211255:-1:exon

XP_027328364.1
type: Protein
SIO_000068: ncbiprotein

position:210780:-1
position: 210780
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:224058:-1
position: 224058
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:224050-224058:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:220528-220615:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:219822-219973:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:218954-219079:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:218182-218305:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:217422-217531:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:216678-216747:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:214890-215041:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:214060-214141:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:213868-213962:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:212940-213067:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:211826-211962:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:210780-211255:-1:exon

MIER2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8839
gene: MIER2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: mesoderm induction early response protein 2 isoform X1
translation: MGSADHRLNLAEILSQNYGVREEREEEEDTQEKQKSLEELEKSFSASQNSEMPFEELLALYGYEASDPISEQDSESNDITPNLPDMTLDKEQIAKDLLSGEEEEETQSSADDLTPSVTSHDASDLFPNQPGSNNFLADEDKEPCSSPCASSMAEDSEEDSIPSNECKKEIMVGPQYQATVPILHLNRHSEKAYENEDQLLWDPNILPEREVEEFLYCAVKRRWDELSSSSLPEGEMVKDNEQALYELVKCNFNAEEALRRLRFNVKVIRDELCAWSEEECRNFEHGYRVHGKNFHLIQANKVRTRSVGECVEYYYMWKKSERYEYFTQQTRLGRKKDYADNDLDGGEVENASRSRSSPPIPSATSCLDSHFGQDQLAIESTEPLSVESTACSLGSMSESGQGYECSTPSETNCSFDPAEETSSGTLSASCTRHPVTPSDTGLYALPPAGPGLAEKQETLQSSGETITMDFTLPADINEGLPLIAGPVDLDRDTEAVVAPAQVSLSVTDFGLIGIGDVNSFLTAHQACPAPVARSEPLSQ
SIO_010081: MIER2
subclass of: SO_0000673
so part of: MIER2
location: complement(join(210780..211255,211826..211962,212964..213067,213868..213962,214060..214141,214890..215041,216678..216747,217422..217531,218182..218305,218954..219079,219822..219965))
location: region:210780-219965:-1
so has part: feature:219822-219965:-1:exon
so has part: feature:218954-219079:-1:exon
so has part: feature:218182-218305:-1:exon
so has part: feature:217422-217531:-1:exon
so has part: feature:216678-216747:-1:exon
so has part: feature:214890-215041:-1:exon
so has part: feature:214060-214141:-1:exon
so has part: feature:213868-213962:-1:exon
so has part: feature:212964-213067:-1:exon
so has part: feature:211826-211962:-1:exon
so has part: feature:210780-211255:-1:exon

XP_027328365.2
type: Protein
SIO_000068: ncbiprotein

position:219965:-1
position: 219965
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:219822-219965:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:218954-219079:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:218182-218305:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:217422-217531:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:216678-216747:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:214890-215041:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:214060-214141:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:213868-213962:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:212964-213067:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:211826-211962:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:210780-211255:-1:exon

MIER2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8839
gene: MIER2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: mesoderm induction early response protein 2 isoform X3
translation: MGSADHRLNLAEILSQNYGVREEREEEEDTQEKQKSLEELEKSFSASQNSEMPFEELLALYGYEASDPISEQDSESNDITPNLPDMTLDKEQIAKDLLSGEEEEETQSSADDLTPSVTSHDASDLFPNQPGSNNFLADEDKEPCSSPCASSMAEDSEEDSIPSNECKKEIMVGPQYQATVPILHLNRHSEKAYENEDQLLWDPNILPEREVEEFLYCAVKRRWDELSSSSLPEGEMVKDNEQALYELVKCNFNAEEALRRLRFNVKVIRDELCAWSEEECRNFEHGYRVHGKNFHLIQANKVRTRSVGECVEYYYMWKKSERYEYFTQQTRLGRKKYVLHPGATDYADNDLDGGEVENASRSRSSPPIPSATSCLDSHFGQDQLAIESTEPLSVESTACSLGSMSESGQGYECSTPSETNCSFDPAEETSSGTLSASCTRHPVTPSDTGLYALPPAGPGLAEKQETLQSSGETITMDFTLPADINEGLPLIAGPVDLDRDTEAVVAPAQVSLSVTDFGLIGIGDVNSFLTAHQACPAPVARSEPLSQ
SIO_010081: MIER2
subclass of: SO_0000673
so part of: MIER2
location: complement(join(210780..211255,211826..211962,212940..213067,213868..213962,214060..214141,214890..215041,216678..216747,217422..217531,218182..218305,218954..219079,219822..219965))
location: region:210780-219965:-1
so has part: feature:219822-219965:-1:exon
so has part: feature:218954-219079:-1:exon
so has part: feature:218182-218305:-1:exon
so has part: feature:217422-217531:-1:exon
so has part: feature:216678-216747:-1:exon
so has part: feature:214890-215041:-1:exon
so has part: feature:214060-214141:-1:exon
so has part: feature:213868-213962:-1:exon
so has part: feature:212940-213067:-1:exon
so has part: feature:211826-211962:-1:exon
so has part: feature:210780-211255:-1:exon

XP_021128095.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:219822-219965:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:218954-219079:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:218182-218305:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:217422-217531:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:216678-216747:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:214890-215041:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:214060-214141:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:213868-213962:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:212940-213067:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:211826-211962:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:210780-211255:-1:exon

MIER2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8839
gene: MIER2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: mesoderm induction early response protein 2 isoform X3
translation: MGSADHRLNLAEILSQNYGVREEREEEEDTQEKQKSLEELEKSFSASQNSEMPFEELLALYGYEASDPISEQDSESNDITPNLPDMTLDKEQIAKDLLSGEEEEETQSSADDLTPSVTSHDASDLFPNQPGSNNFLADEDKEPCSSPCASSMAEDSEEDSIPSNECKKEIMVGPQYQATVPILHLNRHSEKAYENEDQLLWDPNILPEREVEEFLYCAVKRRWDELSSSSLPEGEMVKDNEQALYELVKCNFNAEEALRRLRFNVKVIRDELCAWSEEECRNFEHGYRVHGKNFHLIQANKVRTRSVGECVEYYYMWKKSERYEYFTQQTRLGRKKYVLHPGATDYADNDLDGGEVENASRSRSSPPIPSATSCLDSHFGQDQLAIESTEPLSVESTACSLGSMSESGQGYECSTPSETNCSFDPAEETSSGTLSASCTRHPVTPSDTGLYALPPAGPGLAEKQETLQSSGETITMDFTLPADINEGLPLIAGPVDLDRDTEAVVAPAQVSLSVTDFGLIGIGDVNSFLTAHQACPAPVARSEPLSQ
SIO_010081: MIER2
subclass of: SO_0000673
so part of: MIER2
location: complement(join(210780..211255,211826..211962,212940..213067,213868..213962,214060..214141,214890..215041,216678..216747,217422..217531,218182..218305,218954..219079,219822..219965))
location: region:210780-219965:-1
so has part: feature:219822-219965:-1:exon
so has part: feature:218954-219079:-1:exon
so has part: feature:218182-218305:-1:exon
so has part: feature:217422-217531:-1:exon
so has part: feature:216678-216747:-1:exon
so has part: feature:214890-215041:-1:exon
so has part: feature:214060-214141:-1:exon
so has part: feature:213868-213962:-1:exon
so has part: feature:212940-213067:-1:exon
so has part: feature:211826-211962:-1:exon
so has part: feature:210780-211255:-1:exon

XP_027328366.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:219822-219965:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:218954-219079:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:218182-218305:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:217422-217531:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:216678-216747:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:214890-215041:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:214060-214141:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:213868-213962:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:212940-213067:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:211826-211962:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:210780-211255:-1:exon

MIER2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8839
gene: MIER2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: mesoderm induction early response protein 2 isoform X4
translation: MPFEELLALYGYEASDPISEQDSESNDITPNLPDMTLDKEQIAKDLLSGEEEEETQSSADDLTPSVTSHDASDLFPNQPGSNNFLADEDKEPCSSPCASSMAEDSEEDSIPSNECKKEIMVGPQYQATVPILHLNRHSEKAYENEDQLLWDPNILPEREVEEFLYCAVKRRWDELSSSSLPEGEMVKDNEQALYELVKCNFNAEEALRRLRFNVKVIRDELCAWSEEECRNFEHGYRVHGKNFHLIQANKVRTRSVGECVEYYYMWKKSERYEYFTQQTRLGRKKYVLHPGATDYADNDLDGGEVENASRSRSSPPIPSATSCLDSHFGQDQLAIESTEPLSVESTACSLGSMSESGQGYECSTPSETNCSFDPAEETSSGTLSASCTRHPVTPSDTGLYALPPAGPGLAEKQETLQSSGETITMDFTLPADINEGLPLIAGPVDLDRDTEAVVAPAQVSLSVTDFGLIGIGDVNSFLTAHQACPAPVARSEPLSQ
SIO_010081: MIER2
subclass of: SO_0000673
so part of: MIER2
location: complement(join(210780..211255,211826..211962,212940..213067,213868..213962,214060..214141,214890..215041,216678..216747,217422..217531,218182..218305,218954..219070))
location: region:210780-219070:-1
so has part: feature:218954-219070:-1:exon
so has part: feature:218182-218305:-1:exon
so has part: feature:217422-217531:-1:exon
so has part: feature:216678-216747:-1:exon
so has part: feature:214890-215041:-1:exon
so has part: feature:214060-214141:-1:exon
so has part: feature:213868-213962:-1:exon
so has part: feature:212940-213067:-1:exon
so has part: feature:211826-211962:-1:exon
so has part: feature:210780-211255:-1:exon

XP_021128097.1
type: Protein
SIO_000068: ncbiprotein

position:219070:-1
position: 219070
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:218954-219070:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:218182-218305:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:217422-217531:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:216678-216747:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:214890-215041:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:214060-214141:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:213868-213962:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:212940-213067:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:211826-211962:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:210780-211255:-1:exon

C2CD4C
type: Gene
subclass of: SO_0000704
RO_0002162: 8839
gene: C2CD4C
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(236543..240534)
location: region:236543-240534:-1
so has part: feature:236543-240534:-1:exon
subclass of: SO_0000010

113845639
type: Gene
SIO_000068: ncbigene

position:236543:-1
position: 236543
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:240534:-1
position: 240534
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:236543-240534:-1:exon

C2CD4C
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8839
gene: C2CD4C
product: C2 calcium dependent domain containing 4C, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 7 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 14 samples with support for all annotated introns
transcript id: XM_027472309.2
SIO_010081: C2CD4C
subclass of: SO_0000673
so part of: C2CD4C
location: complement(join(236543..240043,240320..240534))
location: region:236543-240534:-1
so has part: feature:240320-240534:-1:exon
so has part: feature:236543-240043:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:240320-240534:-1:exon

position:240320:-1
position: 240320
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:236543-240043:-1:exon

position:240043:-1
position: 240043
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

C2CD4C
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8839
gene: C2CD4C
product: C2 calcium dependent domain containing 4C, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 7 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 22 samples with support for all annotated introns
transcript id: XM_027472308.2
SIO_010081: C2CD4C
subclass of: SO_0000673
so part of: C2CD4C
location: complement(join(236543..240043,240443..240511))
location: region:236543-240511:-1
so has part: feature:240443-240511:-1:exon
so has part: feature:236543-240043:-1:exon

position:240511:-1
position: 240511
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:240443-240511:-1:exon

position:240443:-1
position: 240443
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:236543-240043:-1:exon

C2CD4C
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8839
gene: C2CD4C
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: C2 calcium-dependent domain-containing protein 4C
translation: MWLLERLRGVAENGGSRGAGPEESPRGSRYSNVLTPDKIPDFFIPPKLSAAPAEAEGSEPPAPPAVGPSTSEQDLAGRKPPRSPRPPSRPRPKATGRHIIQIESAEDWTAEGGFGTNADPQAQTAMSLPYVPKAQTSYGFATLVESPHTRRKESLFHSEHSSLCPSPATSPSAQRRAKLNGESGSRAPADLGAALMHPGRYFSGGESDTCSSAESSPFGSPLLSRSVSLLKIFSQESQSKVIKLKHSVARNSSLSTDDSSADTSPSAQRRARSAPAGGQPLAALDLPQGRNREHSLRLSRGGSLRLAADYDPSNARLRVRLISAEDLYDALVDVRSINCCVSLCLNPGKLQKQRSTIVKNSRNPSFNEDFFFDGLGPGHVRKLSLKLKVVNKGSSLKRDTLLGEKELPLTTLLAGL
SIO_010081: C2CD4C
subclass of: SO_0000673
so part of: C2CD4C
location: complement(238774..240024)
location: region:238774-240024:-1
so has part: feature:238774-240024:-1:exon

XP_027328110.2
type: Protein
SIO_000068: ncbiprotein

position:238774:-1
position: 238774
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:240024:-1
position: 240024
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:238774-240024:-1:exon

C2CD4C
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8839
gene: C2CD4C
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: C2 calcium-dependent domain-containing protein 4C
translation: MWLLERLRGVAENGGSRGAGPEESPRGSRYSNVLTPDKIPDFFIPPKLSAAPAEAEGSEPPAPPAVGPSTSEQDLAGRKPPRSPRPPSRPRPKATGRHIIQIESAEDWTAEGGFGTNADPQAQTAMSLPYVPKAQTSYGFATLVESPHTRRKESLFHSEHSSLCPSPATSPSAQRRAKLNGESGSRAPADLGAALMHPGRYFSGGESDTCSSAESSPFGSPLLSRSVSLLKIFSQESQSKVIKLKHSVARNSSLSTDDSSADTSPSAQRRARSAPAGGQPLAALDLPQGRNREHSLRLSRGGSLRLAADYDPSNARLRVRLISAEDLYDALVDVRSINCCVSLCLNPGKLQKQRSTIVKNSRNPSFNEDFFFDGLGPGHVRKLSLKLKVVNKGSSLKRDTLLGEKELPLTTLLAGL
SIO_010081: C2CD4C
subclass of: SO_0000673
so part of: C2CD4C
location: complement(238774..240024)
location: region:238774-240024:-1
so has part: feature:238774-240024:-1:exon

XP_027328109.2
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:238774-240024:-1:exon

SHC2
type: Gene
subclass of: SO_0000704
RO_0002162: 8839
gene: SHC2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(244121..249569)
location: region:244121-249569:-1
so has part: feature:244121-249569:-1:exon
subclass of: SO_0000010

101803969
type: Gene
SIO_000068: ncbigene

position:244121:-1
position: 244121
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:249569:-1
position: 249569
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:244121-249569:-1:exon

SHC2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8839
gene: SHC2
product: SHC adaptor protein 2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 12 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 95 samples with support for all annotated introns
transcript id: XM_038169241.1
SIO_010081: SHC2
subclass of: SO_0000673
so part of: SHC2
location: complement(join(244121..245293,245378..245679,245775..245936,246061..246127,246211..246391,246513..246639,246794..246845,247024..247077,247202..247321,247490..247550,247869..247939,248835..249569))
location: region:244121-249569:-1
so has part: feature:248835-249569:-1:exon
so has part: feature:247869-247939:-1:exon
so has part: feature:247490-247550:-1:exon
so has part: feature:247202-247321:-1:exon
so has part: feature:247024-247077:-1:exon
so has part: feature:246794-246845:-1:exon
so has part: feature:246513-246639:-1:exon
so has part: feature:246211-246391:-1:exon
so has part: feature:246061-246127:-1:exon
so has part: feature:245775-245936:-1:exon
so has part: feature:245378-245679:-1:exon
so has part: feature:244121-245293:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:248835-249569:-1:exon

position:248835:-1
position: 248835
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:247869-247939:-1:exon

position:247869:-1
position: 247869
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:247939:-1
position: 247939
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:247490-247550:-1:exon

position:247490:-1
position: 247490
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:247550:-1
position: 247550
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:247202-247321:-1:exon

position:247202:-1
position: 247202
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:247321:-1
position: 247321
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:247024-247077:-1:exon

position:247024:-1
position: 247024
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:247077:-1
position: 247077
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:246794-246845:-1:exon

position:246794:-1
position: 246794
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:246845:-1
position: 246845
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:246513-246639:-1:exon

position:246513:-1
position: 246513
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:246639:-1
position: 246639
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:246211-246391:-1:exon

position:246211:-1
position: 246211
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:246391:-1
position: 246391
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:246061-246127:-1:exon

position:246061:-1
position: 246061
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:246127:-1
position: 246127
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:245775-245936:-1:exon

position:245775:-1
position: 245775
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:245936:-1
position: 245936
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:245378-245679:-1:exon

position:245378:-1
position: 245378
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:245679:-1
position: 245679
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:244121-245293:-1:exon

position:245293:-1
position: 245293
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

SHC2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8839
gene: SHC2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: SHC-transforming protein 2
translation: MLGDARGGRGRAAERSLHDISARRPRGSGRGAGGGGAERSGALAPGGGGGGGGGAPGGAGQGMLPEPKYDRFRDEPLRAAPMPAPVPVPVPAPAPGLAQPCPAAGEEPEAGTTFCMLLPRMPQWKFPGPGGFLSRSPSGSSKELSSPARPGGAAEPGGAPSSLAAVLGACEPGCSAPCSLPGLSRLRAGAGAARKAARAEGARPGGEDWNRKGSFISKPAQGWLHPDERVLGPGVSYIVRYMGCIEVLRSMRSLDFNTRTQVTREAINRLYEAVPGVKGIWKKKAPNKALFSILGKSNLRFAGMSIAVNISVDGLNLMIPTTRQIIANHHMQSISFASGGDTDTTDYVAYVAKDPINQRACHILECCDGLAQSVINTVGQAFELRFKQYLHSPPKVVVPPDRVLGMEESAWGEDDETGEHDYYNSIPGKEPPPGGLVDSRLRHGTLLGHVRVQPPSSSPASQGGLAPRREQSSQLGPPWDLESQGQPCDGYLQADGHPLGPRDYEEHMYVNTQSLDTREPDAACGAPEESPKKDLFDMRPFEDALKLHECMAGGGGSPPIEDQWPSPPTRKAPIAPTEEQLRREPWYHGKMSRRDAEKLLQMDGDFLVRDSITNPGQYVLTGMHCGQPKHLLLVDPEGVVRTKDVLFESISHLISHHRQNEQPIVAAESELHLRQVVRRKQ
SIO_010081: SHC2
subclass of: SO_0000673
so part of: SHC2
location: complement(join(245165..245293,245378..245679,245775..245936,246061..246127,246211..246391,246513..246639,246794..246845,247024..247077,247202..247321,247490..247550,247869..247939,248835..249554))
location: region:245165-249554:-1
so has part: feature:248835-249554:-1:exon
so has part: feature:247869-247939:-1:exon
so has part: feature:247490-247550:-1:exon
so has part: feature:247202-247321:-1:exon
so has part: feature:247024-247077:-1:exon
so has part: feature:246794-246845:-1:exon
so has part: feature:246513-246639:-1:exon
so has part: feature:246211-246391:-1:exon
so has part: feature:246061-246127:-1:exon
so has part: feature:245775-245936:-1:exon
so has part: feature:245378-245679:-1:exon
so has part: feature:245165-245293:-1:exon

XP_038025169.1
type: Protein
SIO_000068: ncbiprotein

position:245165:-1
position: 245165
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:249554:-1
position: 249554
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:248835-249554:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:247869-247939:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:247490-247550:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:247202-247321:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:247024-247077:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:246794-246845:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:246513-246639:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:246211-246391:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:246061-246127:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:245775-245936:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:245378-245679:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:245165-245293:-1:exon

LOC101801206
type: Gene
subclass of: SO_0000704
RO_0002162: 8839
gene: LOC101801206
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 253068..265742
location: region:253068-265742:1
so has part: feature:253068-265742:1:exon
subclass of: SO_0000010

101801206
type: Gene
SIO_000068: ncbigene

position:253068:1
position: 253068
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:265742:1
position: 265742
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:253068-265742:1:exon

LOC101801206
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8839
gene: LOC101801206
product: hippocampus abundant transcript 1 protein
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 126 samples with support for all annotated introns
transcript id: XM_027472533.2
SIO_010081: LOC101801206
subclass of: SO_0000673
so part of: LOC101801206
location: join(253068..253320,255039..255134,256307..256369,257458..257585,258064..258178,258748..258966,259463..259576,259902..259973,260374..260486,260647..260744,261312..261478,261564..265742)
location: region:253068-265742:1
so has part: feature:253068-253320:1:exon
so has part: feature:255039-255134:1:exon
so has part: feature:256307-256369:1:exon
so has part: feature:257458-257585:1:exon
so has part: feature:258064-258178:1:exon
so has part: feature:258748-258966:1:exon
so has part: feature:259463-259576:1:exon
so has part: feature:259902-259973:1:exon
so has part: feature:260374-260486:1:exon
so has part: feature:260647-260744:1:exon
so has part: feature:261312-261478:1:exon
so has part: feature:261564-265742:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:253068-253320:1:exon

position:253320:1
position: 253320
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:255039-255134:1:exon

position:255039:1
position: 255039
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:255134:1
position: 255134
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:256307-256369:1:exon

position:256307:1
position: 256307
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:256369:1
position: 256369
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:257458-257585:1:exon

position:257458:1
position: 257458
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:257585:1
position: 257585
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:258064-258178:1:exon

position:258064:1
position: 258064
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:258178:1
position: 258178
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:258748-258966:1:exon

position:258748:1
position: 258748
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:258966:1
position: 258966
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:259463-259576:1:exon

position:259463:1
position: 259463
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:259576:1
position: 259576
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:259902-259973:1:exon

position:259902:1
position: 259902
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:259973:1
position: 259973
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:260374-260486:1:exon

position:260374:1
position: 260374
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:260486:1
position: 260486
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:260647-260744:1:exon

position:260647:1
position: 260647
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:260744:1
position: 260744
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:261312-261478:1:exon

position:261312:1
position: 261312
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:261478:1
position: 261478
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:261564-265742:1:exon

position:261564:1
position: 261564
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC101801206
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8839
gene: LOC101801206
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: hippocampus abundant transcript 1 protein
translation: MTGEKKKKKRLNRSVLLAKKIVIRDGAGRQGIGEPSVYHAVVVIFLEFFAWGLLTTPMLTVLHQTFPQHTFLMNGLIHGVKGLLSFLSAPLIGALSDVWGRKSFLLLTVFFTCAPIPLMKISPWWYFAVISMSGVFAVTFSVIFAYVADITQEHERSTAYGLVSATFAASLVTSPAIGAYLSQAYGDTLVVVLASGVALLDIGFILLAVPESLPEEMRPVSWGAPISWEQADPFASLRKVGQDSTVLLICITVFLSYLPEAGQYSSFFLYLRQVIGFSSETVAAFIGVVGILSILAQTVVLGILMRSIGNKNTILLGLGFQILQLAWYGFGSQPWMMWAAGAVAAMSSITFPAISAMVSRNADPDQQGVVQGMITGIRGLCNGLGPALYGFVFYLFHVELNEMAEVETLGKASKPNMANPTDESSIIPGPPFLFGACSVLLSLLVALFIPEHNLALRSGSHKKHSNGAQTHAHSPQAGGSDGKEPLLEDSSV
SIO_010081: LOC101801206
subclass of: SO_0000673
so part of: LOC101801206
location: join(253237..253320,255039..255134,256307..256369,257458..257585,258064..258178,258748..258966,259463..259576,259902..259973,260374..260486,260647..260744,261312..261478,261564..261773)
location: region:253237-261773:1
so has part: feature:253237-253320:1:exon
so has part: feature:255039-255134:1:exon
so has part: feature:256307-256369:1:exon
so has part: feature:257458-257585:1:exon
so has part: feature:258064-258178:1:exon
so has part: feature:258748-258966:1:exon
so has part: feature:259463-259576:1:exon
so has part: feature:259902-259973:1:exon
so has part: feature:260374-260486:1:exon
so has part: feature:260647-260744:1:exon
so has part: feature:261312-261478:1:exon
so has part: feature:261564-261773:1:exon

XP_027328334.1
type: Protein
SIO_000068: ncbiprotein

position:253237:1
position: 253237
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:261773:1
position: 261773
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:253237-253320:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:255039-255134:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:256307-256369:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:257458-257585:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:258064-258178:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:258748-258966:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:259463-259576:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:259902-259973:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:260374-260486:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:260647-260744:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:261312-261478:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:261564-261773:1:exon

MADCAM1
type: Gene
subclass of: SO_0000704
RO_0002162: 8839
gene: MADCAM1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 269236..272414
location: region:269236-272414:1
so has part: feature:269236-272414:1:exon
subclass of: SO_0000010

110354692
type: Gene
SIO_000068: ncbigene

position:269236:1
position: 269236
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:272414:1
position: 272414
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:269236-272414:1:exon

MADCAM1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8839
gene: MADCAM1
product: mucosal vascular addressin cell adhesion molecule 1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 64 samples with support for all annotated introns
transcript id: XM_027472530.2
SIO_010081: MADCAM1
subclass of: SO_0000673
so part of: MADCAM1
location: join(269236..269428,269914..270180,270299..270613,270922..271587,271709..272414)
location: region:269236-272414:1
so has part: feature:269236-269428:1:exon
so has part: feature:269914-270180:1:exon
so has part: feature:270299-270613:1:exon
so has part: feature:270922-271587:1:exon
so has part: feature:271709-272414:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:269236-269428:1:exon

position:269428:1
position: 269428
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:269914-270180:1:exon

position:269914:1
position: 269914
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:270180:1
position: 270180
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:270299-270613:1:exon

position:270299:1
position: 270299
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:270613:1
position: 270613
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:270922-271587:1:exon

position:270922:1
position: 270922
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:271587:1
position: 271587
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:271709-272414:1:exon

position:271709:1
position: 271709
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

MADCAM1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8839
gene: MADCAM1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: mucosal addressin cell adhesion molecule 1
translation: MEAAPLLLLSALWGCSGRPLAEMVVEPREPLVRYGDAVQLNCSLPCTGAMVQWKGLDTNLGSIDFFPTHSVLHINSAEVATEGTKICQGTCGEEHYQKSVNLKVYSLPDTLQLDAQPPALVPGQPATLRCSAQRVYPPGKLEVTWYRGDQELQRDGPDATETDEELFDIEATLRVAGEDVVEGVLFRCKLTLTVRTETFTREASVAVSAGAVAEQPAAVVTSTESPRTTTTTMGSLSTTRPVPTTALSPEPGDPTRDPTSALTTASQEPKTTSEQAAATEPPPEERSTPQAPVVGSPSARPATATVPSSSPTSPPAGGLAEAEGTAAGGTSRGSHAVGMGTAPACSLRIWSLPPNGTRGRALSIGCHAQCAHNATVRWLRTPVALSQYREEVAGSGSTLQLDHAEPRHQGHYQCILQGHHSQAVSLQLVVSDDVFSADPAIAMGTTMSLLGLIVTGVVSRRLWKRFKSQYELS
SIO_010081: MADCAM1
subclass of: SO_0000673
so part of: MADCAM1
location: join(269380..269428,269914..270180,270299..270613,270922..271587,271709..271833)
location: region:269380-271833:1
so has part: feature:269380-269428:1:exon
so has part: feature:269914-270180:1:exon
so has part: feature:270299-270613:1:exon
so has part: feature:270922-271587:1:exon
so has part: feature:271709-271833:1:exon

XP_027328331.2
type: Protein
SIO_000068: ncbiprotein

position:269380:1
position: 269380
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:271833:1
position: 271833
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:269380-269428:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:269914-270180:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:270299-270613:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:270922-271587:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:271709-271833:1:exon

TPGS1
type: Gene
subclass of: SO_0000704
RO_0002162: 8839
gene: TPGS1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 272629..274540
location: region:272629-274540:1
so has part: feature:272629-274540:1:exon
subclass of: SO_0000010

113845673
type: Gene
SIO_000068: ncbigene

position:272629:1
position: 272629
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:274540:1
position: 274540
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:272629-274540:1:exon

TPGS1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8839
gene: TPGS1
product: tubulin polyglutamylase complex subunit 1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 115 samples with support for all annotated introns
transcript id: XM_027472538.2
SIO_010081: TPGS1
subclass of: SO_0000673
so part of: TPGS1
location: join(272629..273233,273404..274540)
location: region:272629-274540:1
so has part: feature:272629-273233:1:exon
so has part: feature:273404-274540:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:272629-273233:1:exon

position:273233:1
position: 273233
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:273404-274540:1:exon

position:273404:1
position: 273404
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

TPGS1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8839
gene: TPGS1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: tubulin polyglutamylase complex subunit 1
translation: MATGAPRGSVAHTQDGGPRPRPTAAPQRHGNGFPPADWMREARTAAGSPRGLAASAQDGGAGASCPGGLLRARPKWRGPPSPPAAKMAAYEKRRAAAAPAPAVGSGPAEPLGAAAGGGPGSEAEFLLRSGVTAMVREALLKVLEARPEEPVSFLADYFERLVLGGPGAAETAAELPAPPQRLARALWYVRLAHHSHRTAFNNNISTAYEVLGASGRRRRPGVDGRLYSELLRRICQLGAAPQEVSGALLRRVQCRDHEAVPFDVFRYGVLTCSVLLEFVAKAHALYDVLDGGTGAADKRVCQAVLRTLEEALGGGDCSVPVRYLEAGSKLGPDCLALAMDRALQERKLSASMSREEFLKKATALFVAKVKPVD
SIO_010081: TPGS1
subclass of: SO_0000673
so part of: TPGS1
location: join(272644..273233,273404..273935)
location: region:272644-273935:1
so has part: feature:272644-273233:1:exon
so has part: feature:273404-273935:1:exon

XP_027328339.2
type: Protein
SIO_000068: ncbiprotein

position:272644:1
position: 272644
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:273935:1
position: 273935
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:272644-273233:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:273404-273935:1:exon

CDC34
type: Gene
subclass of: SO_0000704
RO_0002162: 8839
gene: CDC34
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 274849..279219
location: region:274849-279219:1
so has part: feature:274849-279219:1:exon
subclass of: SO_0000010

101802829
type: Gene
SIO_000068: ncbigene

position:274849:1
position: 274849
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:279219:1
position: 279219
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:274849-279219:1:exon

CDC34
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8839
gene: CDC34
product: cell division cycle 34, ubiqiutin conjugating enzyme
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 10 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 126 samples with support for all annotated introns
transcript id: XM_038169292.1
SIO_010081: CDC34
subclass of: SO_0000673
so part of: CDC34
location: join(274849..275092,277214..277300,277848..277945,278028..278162,278412..279219)
location: region:274849-279219:1
so has part: feature:274849-275092:1:exon
so has part: feature:277214-277300:1:exon
so has part: feature:277848-277945:1:exon
so has part: feature:278028-278162:1:exon
so has part: feature:278412-279219:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:274849-275092:1:exon

position:275092:1
position: 275092
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:277214-277300:1:exon

position:277214:1
position: 277214
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:277300:1
position: 277300
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:277848-277945:1:exon

position:277848:1
position: 277848
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:277945:1
position: 277945
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:278028-278162:1:exon

position:278028:1
position: 278028
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:278162:1
position: 278162
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:278412-279219:1:exon

position:278412:1
position: 278412
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

CDC34
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8839
gene: CDC34
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: ubiquitin-conjugating enzyme E2 R1
translation: MAGPPVPSSQKALLLELKGLQEEPVEGFRVALVDEGDLYTWEVAIFGPPGTDYEGGYFKARLRFPIDYPYSPPAFRFLTKMWHPNIYETGDVCISILHPPVDDPQSGELPSERWNPTQNVRTILLSVISLLNEPNTFSPANVDASVMYRKWKESKGKDREYTDIIRKQVLGTKVDAERDGVKVPTTLAEYCVKTKTPAPDEGSDLFYDDYYEDDEMEEGADSCHGDDDDSGNEES
SIO_010081: CDC34
subclass of: SO_0000673
so part of: CDC34
location: join(274916..275092,277214..277300,277848..277945,278028..278162,278412..278622)
location: region:274916-278622:1
so has part: feature:274916-275092:1:exon
so has part: feature:277214-277300:1:exon
so has part: feature:277848-277945:1:exon
so has part: feature:278028-278162:1:exon
so has part: feature:278412-278622:1:exon

XP_038025220.1
type: Protein
SIO_000068: ncbiprotein

position:274916:1
position: 274916
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:278622:1
position: 278622
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:274916-275092:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:277214-277300:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:277848-277945:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:278028-278162:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:278412-278622:1:exon

BSG
type: Gene
subclass of: SO_0000704
RO_0002162: 8839
gene: BSG
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 281654..294707
location: region:281654-294707:1
so has part: feature:281654-294707:1:exon
subclass of: SO_0000010

119713037
type: Gene
SIO_000068: ncbigene

position:281654:1
position: 281654
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:294707:1
position: 294707
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:281654-294707:1:exon

BSG
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8839
gene: BSG
product: basigin (Ok blood group), transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 114 samples with support for all annotated introns
transcript id: XM_038169290.1
SIO_010081: BSG
subclass of: SO_0000673
so part of: BSG
location: join(281654..281806,287623..287779,289408..289496,289952..290079,290294..290567,292828..292852,293177..293245,293766..294696)
location: region:281654-294696:1
so has part: feature:281654-281806:1:exon
so has part: feature:287623-287779:1:exon
so has part: feature:289408-289496:1:exon
so has part: feature:289952-290079:1:exon
so has part: feature:290294-290567:1:exon
so has part: feature:292828-292852:1:exon
so has part: feature:293177-293245:1:exon
so has part: feature:293766-294696:1:exon

position:294696:1
position: 294696
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:281654-281806:1:exon

position:281806:1
position: 281806
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:287623-287779:1:exon

position:287623:1
position: 287623
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:287779:1
position: 287779
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:289408-289496:1:exon

position:289408:1
position: 289408
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:289496:1
position: 289496
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:289952-290079:1:exon

position:289952:1
position: 289952
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:290079:1
position: 290079
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:290294-290567:1:exon

position:290294:1
position: 290294
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:290567:1
position: 290567
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:292828-292852:1:exon

position:292828:1
position: 292828
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:292852:1
position: 292852
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:293177-293245:1:exon

position:293177:1
position: 293177
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:293245:1
position: 293245
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:293766-294696:1:exon

position:293766:1
position: 293766
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

BSG
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8839
gene: BSG
product: basigin (Ok blood group), transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 98% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_038169291.1
SIO_010081: BSG
subclass of: SO_0000673
so part of: BSG
location: join(281710..281806,285725..286072,287623..287779,289408..289496,289952..290079,290294..290567,292828..292852,293177..293245,293766..294707)
location: region:281710-294707:1
so has part: feature:281710-281806:1:exon
so has part: feature:285725-286072:1:exon
so has part: feature:287623-287779:1:exon
so has part: feature:289408-289496:1:exon
so has part: feature:289952-290079:1:exon
so has part: feature:290294-290567:1:exon
so has part: feature:292828-292852:1:exon
so has part: feature:293177-293245:1:exon
so has part: feature:293766-294707:1:exon

position:281710:1
position: 281710
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:281710-281806:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:285725-286072:1:exon

position:285725:1
position: 285725
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:286072:1
position: 286072
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:287623-287779:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:289408-289496:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:289952-290079:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:290294-290567:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:292828-292852:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:293177-293245:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:293766-294707:1:exon

BSG
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8839
gene: BSG
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: basigin isoform X2
translation: MAAGTEGVRGLLALLVLGVLAAGGQGTTGFIKSPLSQKRLTQDSVELYCEAIGNPIPEIQWWFEGNEPNETYAQLWDGARQDRVKINATYNLHSTSTIYIANLTGDDSGTYECRASNDPDRNHLSKSPKVKWIRSQANVFVIERPDIQTQFTSTHGKLVLSCNLTEPHSAIDGHEWKYGDKILQTDTESSSVTTYEIEGKKEEHSGIYQCIFKTSPEIKGEINISVVPQVVAYKKSEHGNEGDTGVLTCKNPSFPPVSSWTWSRNGEQSIINGSGRYIIKSSGNKTELRILKLNIEEDTGDYQCIAINVFGTGEATVNLRVRSRLAALWPFLGIVAEVLVLVTIIFIYEKRRKPDEVLDDDDGGSAPLKSNATNHKDKNVRQRNAN
SIO_010081: BSG
subclass of: SO_0000673
so part of: BSG
location: join(281725..281806,285725..286072,287623..287779,289408..289496,289952..290079,290294..290567,292828..292852,293177..293234)
location: region:281725-293234:1
so has part: feature:281725-281806:1:exon
so has part: feature:285725-286072:1:exon
so has part: feature:287623-287779:1:exon
so has part: feature:289408-289496:1:exon
so has part: feature:289952-290079:1:exon
so has part: feature:290294-290567:1:exon
so has part: feature:292828-292852:1:exon
so has part: feature:293177-293234:1:exon

XP_038025219.1
type: Protein
SIO_000068: ncbiprotein

position:281725:1
position: 281725
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:293234:1
position: 293234
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:281725-281806:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:285725-286072:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:287623-287779:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:289408-289496:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:289952-290079:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:290294-290567:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:292828-292852:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:293177-293234:1:exon

BSG
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8839
gene: BSG
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: basigin isoform X1
translation: MAAGTEGVRGLLALLVLGVLAAGGQGTSPDIQTQFTSTHGKLVLSCNLTEPHSAIDGHEWKYGDKILQTDTESSSVTTYEIEGKKEEHSGIYQCIFKTSPEIKGEINISVVPQVVAYKKSEHGNEGDTGVLTCKNPSFPPVSSWTWSRNGEQSIINGSGRYIIKSSGNKTELRILKLNIEEDTGDYQCIAINVFGTGEATVNLRVRSRLAALWPFLGIVAEVLVLVTIIFIYEKRRKPDEVLDDDDGGSAPLKSNATNHKDKNVRQRNAN
SIO_010081: BSG
subclass of: SO_0000673
so part of: BSG
location: join(281725..281806,287623..287779,289408..289496,289952..290079,290294..290567,292828..292852,293177..293234)
location: region:281725-293234:1
so has part: feature:281725-281806:1:exon
so has part: feature:287623-287779:1:exon
so has part: feature:289408-289496:1:exon
so has part: feature:289952-290079:1:exon
so has part: feature:290294-290567:1:exon
so has part: feature:292828-292852:1:exon
so has part: feature:293177-293234:1:exon

XP_038025218.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:281725-281806:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:287623-287779:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:289408-289496:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:289952-290079:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:290294-290567:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:292828-292852:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:293177-293234:1:exon

HCN2
type: Gene
subclass of: SO_0000704
RO_0002162: 8839
gene: HCN2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 295082..308713
location: region:295082-308713:1
so has part: feature:295082-308713:1:exon
subclass of: SO_0000010

113845653
type: Gene
SIO_000068: ncbigene

position:295082:1
position: 295082
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:308713:1
position: 308713
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:295082-308713:1:exon

HCN2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8839
gene: HCN2
product: hyperpolarization activated cyclic nucleotide gated potassium and sodium channel 2
exception: unclassified transcription discrepancy
note: The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: deleted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 11 Proteins, and 94% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_038168963.1
SIO_010081: HCN2
subclass of: SO_0000673
so part of: HCN2
location: join(295082..295136,296282..296901,302104..302527,304107..304268,305081..305299,305568..305714,305997..306237,306426..306590,306879..308713)
location: region:295082-308713:1
so has part: feature:295082-295136:1:exon
so has part: feature:296282-296901:1:exon
so has part: feature:302104-302527:1:exon
so has part: feature:304107-304268:1:exon
so has part: feature:305081-305299:1:exon
so has part: feature:305568-305714:1:exon
so has part: feature:305997-306237:1:exon
so has part: feature:306426-306590:1:exon
so has part: feature:306879-308713:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:295082-295136:1:exon

position:295136:1
position: 295136
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:296282-296901:1:exon

position:296282:1
position: 296282
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:296901:1
position: 296901
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:302104-302527:1:exon

position:302104:1
position: 302104
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:302527:1
position: 302527
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:304107-304268:1:exon

position:304107:1
position: 304107
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:304268:1
position: 304268
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:305081-305299:1:exon

position:305081:1
position: 305081
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:305299:1
position: 305299
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:305568-305714:1:exon

position:305568:1
position: 305568
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:305714:1
position: 305714
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:305997-306237:1:exon

position:305997:1
position: 305997
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:306237:1
position: 306237
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:306426-306590:1:exon

position:306426:1
position: 306426
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:306590:1
position: 306590
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:306879-308713:1:exon

position:306879:1
position: 306879
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

HCN2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8839
gene: HCN2
exception: unclassified translation discrepancy
note: The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: deleted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: LOW QUALITY PROTEIN: potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 2
translation: MCGTGWDLSISVRGVNVGAGPLSRRGPRRRGELRSRPGPGARPRPAPGPPPERRRAPLGRRWPRRRQGRMRAGRGAAGGEAAAEEEAAAAAAAEGAKRGGGAGGRPRGRGGKGSPNGECRRGEPPRSPGAEPPREPKVSFSCGGGGGGGSASPGGAKAAEEGDDAGEEARGSQASFMQRQFGAMLQPGVNKFSLRMFGSQKAVEREQERVKSAGAWIIHPYSDFRFYWDFTMLLFMVGNLIIIPVGITFFKEETTAPWIVFNVVSDTFFLMDLVLNFRTGIVIEDNTEIILDPERIKKKYLKTWFVVDFVSSIPVDYVFLIVEKGIDSEVYKTARALRIVRFTKILSLLRLLRLSRLIRYIHQWEEIFHMTYDLASAVMRIINLIGMMLLLCHWDGCLQFLVPMLQDFPQNCWVSINGMVNDSWSELYSFALFKSMSHMLCIGYGKQAPESMTDIWLTMLSMIVGATCYAMFIGHATALIQSLDSSRRQYQEKYKQVEQYMSFHKLPADFRQKIHDYYEHRYQGKMFDEDSILGELNEPLREEIVNFNCRKLVASMPLFANADPNFVTAMLTKLKFEVFQPGDYIIREGTIGKKMYFIQHGVVSILTKGNKEMKLSDGSYFGEICLLTRGRRTASVRADTYCRLYSLSVDNFNEVLEEYPMMRRAFETVAIDRLDRIGKKNSILLHKVQHDLNSGVFNNQENEIIQEIVKYDREMVQQAELQQHTAMYSPVQPQVTSAIATLQQAVAMSFCPQMASPLVGSMALGSPRMMRRLQYAQAVPSPFAVSPVLLQQSPPQQPQPPTPHANPSPSQDQAPPTALPASAGALAAASPPSQSPLASRTFAYGGAKGQLGSQLSLSQQQAPGSPPRLAVHKSTQALHTSSLSQDSRPLSASQPSLPHGLAAGSTQSPPASARESCASIAGGPAAASPGSAPPAGLRGPASSRGALSHPAPAGPPALQQDSGATRKDSVGGTPDTDPAKSRLSSNL
SIO_010081: HCN2
subclass of: SO_0000673
so part of: HCN2
location: join(295082..295136,296282..296901,302104..302527,304107..304268,305081..305299,305568..305714,305997..306237,306426..306590,306879..307810)
location: region:295082-307810:1
so has part: feature:295082-295136:1:exon
so has part: feature:296282-296901:1:exon
so has part: feature:302104-302527:1:exon
so has part: feature:304107-304268:1:exon
so has part: feature:305081-305299:1:exon
so has part: feature:305568-305714:1:exon
so has part: feature:305997-306237:1:exon
so has part: feature:306426-306590:1:exon
so has part: feature:306879-307810:1:exon

XP_038024891.1
type: Protein
SIO_000068: ncbiprotein

position:307810:1
position: 307810
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:295082-295136:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:296282-296901:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:302104-302527:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:304107-304268:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:305081-305299:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:305568-305714:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:305997-306237:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:306426-306590:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:306879-307810:1:exon

POLRMT
type: Gene
subclass of: SO_0000704
RO_0002162: 8839
gene: POLRMT
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(309256..324270)
location: region:309256-324270:-1
so has part: feature:309256-324270:-1:exon
subclass of: SO_0000010

101798164
type: Gene
SIO_000068: ncbigene

position:309256:-1
position: 309256
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:324270:-1
position: 324270
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:309256-324270:-1:exon

POLRMT
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8839
gene: POLRMT
product: RNA polymerase mitochondrial, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 103 samples with support for all annotated introns
transcript id: XM_038169142.1
SIO_010081: POLRMT
subclass of: SO_0000673
so part of: POLRMT
location: complement(join(309256..309946,310732..310802,311309..311391,311871..311943,312148..312246,312494..312546,313267..313380,313672..313758,314014..314193,315082..315204,317024..317146,317692..318471,318649..318888,319542..319712,320041..320208,320357..320464,320952..321138,321678..321808,322164..322846,323495..323590,324144..324270))
location: region:309256-324270:-1
so has part: feature:324144-324270:-1:exon
so has part: feature:323495-323590:-1:exon
so has part: feature:322164-322846:-1:exon
so has part: feature:321678-321808:-1:exon
so has part: feature:320952-321138:-1:exon
so has part: feature:320357-320464:-1:exon
so has part: feature:320041-320208:-1:exon
so has part: feature:319542-319712:-1:exon
so has part: feature:318649-318888:-1:exon
so has part: feature:317692-318471:-1:exon
so has part: feature:317024-317146:-1:exon
so has part: feature:315082-315204:-1:exon
so has part: feature:314014-314193:-1:exon
so has part: feature:313672-313758:-1:exon
so has part: feature:313267-313380:-1:exon
so has part: feature:312494-312546:-1:exon
so has part: feature:312148-312246:-1:exon
so has part: feature:311871-311943:-1:exon
so has part: feature:311309-311391:-1:exon
so has part: feature:310732-310802:-1:exon
so has part: feature:309256-309946:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:324144-324270:-1:exon

position:324144:-1
position: 324144
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:323495-323590:-1:exon

position:323495:-1
position: 323495
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:323590:-1
position: 323590
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:322164-322846:-1:exon

position:322164:-1
position: 322164
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:322846:-1
position: 322846
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:321678-321808:-1:exon

position:321678:-1
position: 321678
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:321808:-1
position: 321808
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:320952-321138:-1:exon

position:320952:-1
position: 320952
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:321138:-1
position: 321138
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:320357-320464:-1:exon

position:320357:-1
position: 320357
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:320464:-1
position: 320464
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:320041-320208:-1:exon

position:320041:-1
position: 320041
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:320208:-1
position: 320208
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:319542-319712:-1:exon

position:319542:-1
position: 319542
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:319712:-1
position: 319712
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:318649-318888:-1:exon

position:318649:-1
position: 318649
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:318888:-1
position: 318888
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:317692-318471:-1:exon

position:317692:-1
position: 317692
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:318471:-1
position: 318471
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:317024-317146:-1:exon

position:317024:-1
position: 317024
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:317146:-1
position: 317146
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:315082-315204:-1:exon

position:315082:-1
position: 315082
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:315204:-1
position: 315204
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:314014-314193:-1:exon

position:314014:-1
position: 314014
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:314193:-1
position: 314193
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:313672-313758:-1:exon

position:313672:-1
position: 313672
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:313758:-1
position: 313758
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:313267-313380:-1:exon

position:313267:-1
position: 313267
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:313380:-1
position: 313380
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:312494-312546:-1:exon

position:312494:-1
position: 312494
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:312546:-1
position: 312546
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:312148-312246:-1:exon

position:312148:-1
position: 312148
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:312246:-1
position: 312246
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:311871-311943:-1:exon

position:311871:-1
position: 311871
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:311943:-1
position: 311943
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:311309-311391:-1:exon

position:311309:-1
position: 311309
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:311391:-1
position: 311391
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:310732-310802:-1:exon

position:310732:-1
position: 310732
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:310802:-1
position: 310802
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:309256-309946:-1:exon

position:309946:-1
position: 309946
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

POLRMT
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8839
gene: POLRMT
product: RNA polymerase mitochondrial, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 126 samples with support for all annotated introns
transcript id: XM_038169141.1
SIO_010081: POLRMT
subclass of: SO_0000673
so part of: POLRMT
location: complement(join(309256..309946,310732..310802,311309..311391,311871..311943,312148..312246,312494..312546,313267..313380,313672..313758,314014..314193,315082..315204,317024..317146,317692..318471,318649..318888,319542..319712,320041..320208,320357..320506,320952..321138,321678..321808,322164..322846,323495..323590,324144..324269))
location: region:309256-324269:-1
so has part: feature:324144-324269:-1:exon
so has part: feature:323495-323590:-1:exon
so has part: feature:322164-322846:-1:exon
so has part: feature:321678-321808:-1:exon
so has part: feature:320952-321138:-1:exon
so has part: feature:320357-320506:-1:exon
so has part: feature:320041-320208:-1:exon
so has part: feature:319542-319712:-1:exon
so has part: feature:318649-318888:-1:exon
so has part: feature:317692-318471:-1:exon
so has part: feature:317024-317146:-1:exon
so has part: feature:315082-315204:-1:exon
so has part: feature:314014-314193:-1:exon
so has part: feature:313672-313758:-1:exon
so has part: feature:313267-313380:-1:exon
so has part: feature:312494-312546:-1:exon
so has part: feature:312148-312246:-1:exon
so has part: feature:311871-311943:-1:exon
so has part: feature:311309-311391:-1:exon
so has part: feature:310732-310802:-1:exon
so has part: feature:309256-309946:-1:exon

position:324269:-1
position: 324269
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:324144-324269:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:323495-323590:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:322164-322846:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:321678-321808:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:320952-321138:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:320357-320506:-1:exon

position:320506:-1
position: 320506
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:320041-320208:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:319542-319712:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:318649-318888:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:317692-318471:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:317024-317146:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:315082-315204:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:314014-314193:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:313672-313758:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:313267-313380:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:312494-312546:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:312148-312246:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:311871-311943:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:311309-311391:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:310732-310802:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:309256-309946:-1:exon

POLRMT
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8839
gene: POLRMT
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: DNA-directed RNA polymerase, mitochondrial isoform X2
translation: MALLRLRAALLGPGPLRGGGIPWSVLRTYSSVSAKEKARKNVVCERTELLEVLKARVKQLQASPGPEVTVSKAELAPLRMGRQQEPPAPRQSAASPAQPSSWVEKLKREMYVRQAKVERKLSIAASKMTLVGQANAKVKVKAVPSTKVKVKAVPNAKVKVKAVPKPKAKPKATKSPKETKVAAWSQGHAGPSSACSKPEVVEVKQDVKAEKAPNVPEKRESNHQKIMQQTIQSNLECLLCLQQPEEAERLLLLCHSSPMKRKLLTIGAYNIVMRSWARKGCLHRLNRVLSLLESAGLRPNLDSYAAALECMGRGQACTKIIWRCVQQLKQDGFHVDELFQKCLFEGDEKETVLRAIRIVQPDYQLPPAPKPQTCKSALLDNFYSKELRERFQQQLEMELNSTITIQSVESTKPLTPQALRARKQLAALRAQWRGAILQALQKAKHNMSQKRTMSGYNSLYPYLCLLPDEEYVDIMMQILNTLSPQGESLSVLARELGSKVYDRYLTQRKLHSRQLEKVQEIYQDYIHLLAKDSQPGEYLPREYWEKLVAEAGYGPSLRLKDCSWPYVLLMRLGVYLLEILVHSVKVPRNTLKPRLESRLIPVLYHIYSFRSSWQVGLIKPHPIFSQLVSDAAETTLTFSSSVMPMLCPPIPWTSPHFGAFVLSDTKLMRYVDGAFQHQQLLDQCPQVNLHPVLDALNQLGNCAWKINQPVLDIIISIFNDKGNEKLDIPPPLSEAPKPPVTPGNSSAWHKSQKHELLLCKKKAAEMHSLRMDALYKLSIANHVRDKVFWFPHNMDFRGRTYPCPPYFNHLGNDVTRAILLFAEGRPLGPKGLDWLKIHLINLTGLKKKNSLQERLGYANEIMEEILDSADRPLTGRKWWMNTDEPWQVLACCMEIAQASRSPDPVAFVSHFPVHQDGSCNGLQHYAALGRDLIGAISVNLMPCSVPQDVYSAVAQQVEEFRKKDAAEGLKIAQVLEGFISRKVVKQTVMTVVYGVTRYGGRLQIEKRLKEIDEFPEEYLWEASHYLVRQVFNGIKEMFSATRDIQHWLTESAKLIAQSGQTVEWVTPMGLPIVQPYYRVRSTVLNSNMQNLSVKSSANTNQKPDTVKQKNAFPPNFIHSLDSTHMMLTALHCFRQGLTFVSVHDCYWTHALTVDVMNQICRQQFVALHSQKILQDLSKFMLKKYCSPSEDSRAPWQKKLMEQLSSVPETGEFNLTKVMDSTYFFS
SIO_010081: POLRMT
subclass of: SO_0000673
so part of: POLRMT
location: complement(join(309897..309946,310732..310802,311309..311391,311871..311943,312148..312246,312494..312546,313267..313380,313672..313758,314014..314193,315082..315204,317024..317146,317692..318471,318649..318888,319542..319712,320041..320208,320357..320464,320952..321138,321678..321808,322164..322846,323495..323590,324144..324201))
location: region:309897-324201:-1
so has part: feature:324144-324201:-1:exon
so has part: feature:323495-323590:-1:exon
so has part: feature:322164-322846:-1:exon
so has part: feature:321678-321808:-1:exon
so has part: feature:320952-321138:-1:exon
so has part: feature:320357-320464:-1:exon
so has part: feature:320041-320208:-1:exon
so has part: feature:319542-319712:-1:exon
so has part: feature:318649-318888:-1:exon
so has part: feature:317692-318471:-1:exon
so has part: feature:317024-317146:-1:exon
so has part: feature:315082-315204:-1:exon
so has part: feature:314014-314193:-1:exon
so has part: feature:313672-313758:-1:exon
so has part: feature:313267-313380:-1:exon
so has part: feature:312494-312546:-1:exon
so has part: feature:312148-312246:-1:exon
so has part: feature:311871-311943:-1:exon
so has part: feature:311309-311391:-1:exon
so has part: feature:310732-310802:-1:exon
so has part: feature:309897-309946:-1:exon

XP_038025070.1
type: Protein
SIO_000068: ncbiprotein

position:309897:-1
position: 309897
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:324201:-1
position: 324201
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:324144-324201:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:323495-323590:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:322164-322846:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:321678-321808:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:320952-321138:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:320357-320464:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:320041-320208:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:319542-319712:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:318649-318888:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:317692-318471:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:317024-317146:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:315082-315204:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:314014-314193:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:313672-313758:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:313267-313380:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:312494-312546:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:312148-312246:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:311871-311943:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:311309-311391:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:310732-310802:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:309897-309946:-1:exon

POLRMT
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8839
gene: POLRMT
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: DNA-directed RNA polymerase, mitochondrial isoform X1
translation: MALLRLRAALLGPGPLRGGGIPWSVLRTYSSVSAKEKARKNVVCERTELLEVLKARVKQLQASPGPEVTVSKAELAPLRMGRQQEPPAPRQSAASPAQPSSWVEKLKREMYVRQAKVERKLSIAASKMTLVGQANAKVKVKAVPSTKVKVKAVPNAKVKVKAVPKPKAKPKATKSPKETKVAAWSQGHAGPSSACSKPEVVEVKQDVKAEKAPNVPEKRESNHQKIMQQTIQSNLECLLCLQQPEEAERLLLLCHSSPMKRKLLTIGAYNIVMRSWARKGCLHRLNRVLSLLESAGLRPNLDSYAAALECMGRGQACTKIIWRCVQQLKQDGFHVDELFQKCLFEGDEKETVLRAIRIVQPDYQLPPAPKPQTCKSALLDNFYSKEKVVSYPKLDFSVQELRERFQQQLEMELNSTITIQSVESTKPLTPQALRARKQLAALRAQWRGAILQALQKAKHNMSQKRTMSGYNSLYPYLCLLPDEEYVDIMMQILNTLSPQGESLSVLARELGSKVYDRYLTQRKLHSRQLEKVQEIYQDYIHLLAKDSQPGEYLPREYWEKLVAEAGYGPSLRLKDCSWPYVLLMRLGVYLLEILVHSVKVPRNTLKPRLESRLIPVLYHIYSFRSSWQVGLIKPHPIFSQLVSDAAETTLTFSSSVMPMLCPPIPWTSPHFGAFVLSDTKLMRYVDGAFQHQQLLDQCPQVNLHPVLDALNQLGNCAWKINQPVLDIIISIFNDKGNEKLDIPPPLSEAPKPPVTPGNSSAWHKSQKHELLLCKKKAAEMHSLRMDALYKLSIANHVRDKVFWFPHNMDFRGRTYPCPPYFNHLGNDVTRAILLFAEGRPLGPKGLDWLKIHLINLTGLKKKNSLQERLGYANEIMEEILDSADRPLTGRKWWMNTDEPWQVLACCMEIAQASRSPDPVAFVSHFPVHQDGSCNGLQHYAALGRDLIGAISVNLMPCSVPQDVYSAVAQQVEEFRKKDAAEGLKIAQVLEGFISRKVVKQTVMTVVYGVTRYGGRLQIEKRLKEIDEFPEEYLWEASHYLVRQVFNGIKEMFSATRDIQHWLTESAKLIAQSGQTVEWVTPMGLPIVQPYYRVRSTVLNSNMQNLSVKSSANTNQKPDTVKQKNAFPPNFIHSLDSTHMMLTALHCFRQGLTFVSVHDCYWTHALTVDVMNQICRQQFVALHSQKILQDLSKFMLKKYCSPSEDSRAPWQKKLMEQLSSVPETGEFNLTKVMDSTYFFS
SIO_010081: POLRMT
subclass of: SO_0000673
so part of: POLRMT
location: complement(join(309897..309946,310732..310802,311309..311391,311871..311943,312148..312246,312494..312546,313267..313380,313672..313758,314014..314193,315082..315204,317024..317146,317692..318471,318649..318888,319542..319712,320041..320208,320357..320506,320952..321138,321678..321808,322164..322846,323495..323590,324144..324201))
location: region:309897-324201:-1
so has part: feature:324144-324201:-1:exon
so has part: feature:323495-323590:-1:exon
so has part: feature:322164-322846:-1:exon
so has part: feature:321678-321808:-1:exon
so has part: feature:320952-321138:-1:exon
so has part: feature:320357-320506:-1:exon
so has part: feature:320041-320208:-1:exon
so has part: feature:319542-319712:-1:exon
so has part: feature:318649-318888:-1:exon
so has part: feature:317692-318471:-1:exon
so has part: feature:317024-317146:-1:exon
so has part: feature:315082-315204:-1:exon
so has part: feature:314014-314193:-1:exon
so has part: feature:313672-313758:-1:exon
so has part: feature:313267-313380:-1:exon
so has part: feature:312494-312546:-1:exon
so has part: feature:312148-312246:-1:exon
so has part: feature:311871-311943:-1:exon
so has part: feature:311309-311391:-1:exon
so has part: feature:310732-310802:-1:exon
so has part: feature:309897-309946:-1:exon

XP_038025069.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:324144-324201:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:323495-323590:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:322164-322846:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:321678-321808:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:320952-321138:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:320357-320506:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:320041-320208:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:319542-319712:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:318649-318888:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:317692-318471:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:317024-317146:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:315082-315204:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:314014-314193:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:313672-313758:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:313267-313380:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:312494-312546:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:312148-312246:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:311871-311943:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:311309-311391:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:310732-310802:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:309897-309946:-1:exon

POLRMT
type: Miscellaneous RNA
subclass of: SO_0000673
RO_0002162: 8839
gene: POLRMT
product: RNA polymerase mitochondrial, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 94 samples with support for all annotated introns
transcript id: XR_005261297.1
SIO_010081: POLRMT
so part of: POLRMT
location: complement(join(311871..311943,312148..312329,312494..312546,313267..313380,313672..313758,314014..314193,315082..315204,317024..317146,317692..318471,318649..318888,319542..319712,320041..320208,320357..320506,320952..321138,321678..321808,322164..322846,323495..323590,324144..324270))
location: region:311871-324270:-1
so has part: feature:324144-324270:-1:exon
so has part: feature:323495-323590:-1:exon
so has part: feature:322164-322846:-1:exon
so has part: feature:321678-321808:-1:exon
so has part: feature:320952-321138:-1:exon
so has part: feature:320357-320506:-1:exon
so has part: feature:320041-320208:-1:exon
so has part: feature:319542-319712:-1:exon
so has part: feature:318649-318888:-1:exon
so has part: feature:317692-318471:-1:exon
so has part: feature:317024-317146:-1:exon
so has part: feature:315082-315204:-1:exon
so has part: feature:314014-314193:-1:exon
so has part: feature:313672-313758:-1:exon
so has part: feature:313267-313380:-1:exon
so has part: feature:312494-312546:-1:exon
so has part: feature:312148-312329:-1:exon
so has part: feature:311871-311943:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:324144-324270:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:323495-323590:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:322164-322846:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:321678-321808:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:320952-321138:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:320357-320506:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:320041-320208:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:319542-319712:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:318649-318888:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:317692-318471:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:317024-317146:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:315082-315204:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:314014-314193:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:313672-313758:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:313267-313380:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:312494-312546:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:312148-312329:-1:exon

position:312329:-1
position: 312329
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:311871-311943:-1:exon

FGF22
type: Gene
subclass of: SO_0000704
RO_0002162: 8839
gene: FGF22
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 324892..328996
location: region:324892-328996:1
so has part: feature:324892-328996:1:exon
subclass of: SO_0000010

113845652
type: Gene
SIO_000068: ncbigene

position:324892:1
position: 324892
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:328996:1
position: 328996
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:324892-328996:1:exon

FGF22
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8839
gene: FGF22
product: fibroblast growth factor 22, transcript variant X7
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 9 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 72 samples with support for all annotated introns
transcript id: XM_027472344.2
SIO_010081: FGF22
subclass of: SO_0000673
so part of: FGF22
location: join(324892..325156,328074..328177,328441..328996)
location: region:324892-328996:1
so has part: feature:324892-325156:1:exon
so has part: feature:328074-328177:1:exon
so has part: feature:328441-328996:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:324892-325156:1:exon

position:325156:1
position: 325156
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:328074-328177:1:exon

position:328074:1
position: 328074
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:328177:1
position: 328177
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:328441-328996:1:exon

position:328441:1
position: 328441
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

FGF22
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8839
gene: FGF22
product: fibroblast growth factor 22, transcript variant X8
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 75 samples with support for all annotated introns
transcript id: XM_038169149.1
SIO_010081: FGF22
subclass of: SO_0000673
so part of: FGF22
location: join(324892..325156,328074..328177,328444..328996)
location: region:324892-328996:1
so has part: feature:324892-325156:1:exon
so has part: feature:328074-328177:1:exon
so has part: feature:328444-328996:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:324892-325156:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:328074-328177:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:328444-328996:1:exon

position:328444:1
position: 328444
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

FGF22
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8839
gene: FGF22
product: fibroblast growth factor 22, transcript variant X5
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 51 samples with support for all annotated introns
transcript id: XM_038169147.1
SIO_010081: FGF22
subclass of: SO_0000673
so part of: FGF22
location: join(324892..325156,328074..328173,328441..328996)
location: region:324892-328996:1
so has part: feature:324892-325156:1:exon
so has part: feature:328074-328173:1:exon
so has part: feature:328441-328996:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:324892-325156:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:328074-328173:1:exon

position:328173:1
position: 328173
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:328441-328996:1:exon

FGF22
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8839
gene: FGF22
product: fibroblast growth factor 22, transcript variant X6
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 59 samples with support for all annotated introns
transcript id: XM_038169148.1
SIO_010081: FGF22
subclass of: SO_0000673
so part of: FGF22
location: join(324892..325156,328074..328173,328444..328996)
location: region:324892-328996:1
so has part: feature:324892-325156:1:exon
so has part: feature:328074-328173:1:exon
so has part: feature:328444-328996:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:324892-325156:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:328074-328173:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:328444-328996:1:exon

FGF22
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8839
gene: FGF22
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: fibroblast growth factor 22 isoform X5
translation: MRRGGPAAIAACLAGALAVLAGPGPGPGPGAGSPPWGGRRPPRSYGHLEGDVRCRRLFSATRFFLRIDGGGGVEGTRCRERPGSIVEIRSVRVGVVAIRAVHTGFYLAMNKQGRLYGRSSAPTASSRSASRRTATTPTRRCAGGTGAAPCSSRSTARAGRSEGARRAGSTSPRTSSPCSSAEPGSQTVLWKKREK
SIO_010081: FGF22
subclass of: SO_0000673
so part of: FGF22
location: join(324907..325156,328074..328173,328441..328678)
location: region:324907-328678:1
so has part: feature:324907-325156:1:exon
so has part: feature:328074-328173:1:exon
so has part: feature:328441-328678:1:exon

XP_038025075.1
type: Protein
SIO_000068: ncbiprotein

position:324907:1
position: 324907
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:328678:1
position: 328678
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:324907-325156:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:328074-328173:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:328441-328678:1:exon

FGF22
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8839
gene: FGF22
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: fibroblast growth factor 22 isoform X6
translation: MRRGGPAAIAACLAGALAVLAGPGPGPGPGAGSPPWGGRRPPRSYGHLEGDVRCRRLFSATRFFLRIDGGGGVEGTRCRERPGSIVEIRSVRVGVVAIRAVHTGFYLAMNKQGRLYGSSAPTASSRSASRRTATTPTRRCAGGTGAAPCSSRSTARAGRSEGARRAGSTSPRTSSPCSSAEPGSQTVLWKKREK
SIO_010081: FGF22
subclass of: SO_0000673
so part of: FGF22
location: join(324907..325156,328074..328173,328444..328678)
location: region:324907-328678:1
so has part: feature:324907-325156:1:exon
so has part: feature:328074-328173:1:exon
so has part: feature:328444-328678:1:exon

XP_038025076.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:324907-325156:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:328074-328173:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:328444-328678:1:exon

FGF22
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8839
gene: FGF22
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: fibroblast growth factor 22 isoform X7
translation: MRRGGPAAIAACLAGALAVLAGPGPGPGPGAGSPPWGGRRPPRSYGHLEGDVRCRRLFSATRFFLRIDGGGGVEGTRCRERPGSIVEIRSVRVGVVAIRAVHTGFYLAMNKQGRLYGSKEFSPNCKFKERIEENGYNTYASLRWRHRGRPMFLSLNSKGRPQRGGQTRRQHLSTHFLPMLIS
SIO_010081: FGF22
subclass of: SO_0000673
so part of: FGF22
location: join(324907..325156,328074..328177,328441..328635)
location: region:324907-328635:1
so has part: feature:324907-325156:1:exon
so has part: feature:328074-328177:1:exon
so has part: feature:328441-328635:1:exon

XP_027328145.1
type: Protein
SIO_000068: ncbiprotein

position:328635:1
position: 328635
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:324907-325156:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:328074-328177:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:328441-328635:1:exon

FGF22
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8839
gene: FGF22
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: fibroblast growth factor 22 isoform X8
translation: MRRGGPAAIAACLAGALAVLAGPGPGPGPGAGSPPWGGRRPPRSYGHLEGDVRCRRLFSATRFFLRIDGGGGVEGTRCRERPGSIVEIRSVRVGVVAIRAVHTGFYLAMNKQGRLYGSEFSPNCKFKERIEENGYNTYASLRWRHRGRPMFLSLNSKGRPQRGGQTRRQHLSTHFLPMLIS
SIO_010081: FGF22
subclass of: SO_0000673
so part of: FGF22
location: join(324907..325156,328074..328177,328444..328635)
location: region:324907-328635:1
so has part: feature:324907-325156:1:exon
so has part: feature:328074-328177:1:exon
so has part: feature:328444-328635:1:exon

XP_038025077.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:324907-325156:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:328074-328177:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:328444-328635:1:exon

FGF22
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8839
gene: FGF22
product: fibroblast growth factor 22, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 100 samples with support for all annotated introns
transcript id: XM_038169145.1
SIO_010081: FGF22
subclass of: SO_0000673
so part of: FGF22
location: join(325163..328177,328441..328996)
location: region:325163-328996:1
so has part: feature:325163-328177:1:exon
so has part: feature:328441-328996:1:exon

position:325163:1
position: 325163
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:325163-328177:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:328441-328996:1:exon

FGF22
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8839
gene: FGF22
product: fibroblast growth factor 22, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 103 samples with support for all annotated introns
transcript id: XM_038169146.1
SIO_010081: FGF22
subclass of: SO_0000673
so part of: FGF22
location: join(325163..328177,328444..328996)
location: region:325163-328996:1
so has part: feature:325163-328177:1:exon
so has part: feature:328444-328996:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:325163-328177:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:328444-328996:1:exon

FGF22
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8839
gene: FGF22
product: fibroblast growth factor 22, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 63 samples with support for all annotated introns
transcript id: XM_038169143.1
SIO_010081: FGF22
subclass of: SO_0000673
so part of: FGF22
location: join(325163..328173,328441..328996)
location: region:325163-328996:1
so has part: feature:325163-328173:1:exon
so has part: feature:328441-328996:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:325163-328173:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:328441-328996:1:exon

FGF22
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8839
gene: FGF22
product: fibroblast growth factor 22, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 75 samples with support for all annotated introns
transcript id: XM_038169144.1
SIO_010081: FGF22
subclass of: SO_0000673
so part of: FGF22
location: join(325163..328173,328444..328996)
location: region:325163-328996:1
so has part: feature:325163-328173:1:exon
so has part: feature:328444-328996:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:325163-328173:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:328444-328996:1:exon

FGF22
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8839
gene: FGF22
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: fibroblast growth factor 22 isoform X1
translation: MGMGPGRLLSRWPGSRIPRVSVGALGVSTIKPAWSDRMPFPLAAPMGICGLGARSNAWAGAGPRCRLSAWVHPLRAASIPQPPAPIPAGASQASGTGAHGEHRPGRTLVPAAPCPGTEPSCTPPAPSSCARCLPPDPHPPLPYTLRPLQGPAGPGGMVGLRAGSGPWGSAACVGQGHSCQFGENKHEVGVGQRLTACSGKRSLGSVSLQLRSRGQLGQGRAGIKTKPSPGHGFPPPAPDSGCSPCSPLSLCGEGIPPSLPPSLHPSVHVSVCLSGKARRCCPSLVALGGQSRGAGEGPLGEVAHLTAALRCPAGIVEIRSVRVGVVAIRAVHTGFYLAMNKQGRLYGRSSAPTASSRSASRRTATTPTRRCAGGTGAAPCSSRSTARAGRSEGARRAGSTSPRTSSPCSSAEPGSQTVLWKKREK
SIO_010081: FGF22
subclass of: SO_0000673
so part of: FGF22
location: join(327134..328173,328441..328678)
location: region:327134-328678:1
so has part: feature:327134-328173:1:exon
so has part: feature:328441-328678:1:exon

XP_038025071.1
type: Protein
SIO_000068: ncbiprotein

position:327134:1
position: 327134
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:327134-328173:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:328441-328678:1:exon

FGF22
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8839
gene: FGF22
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: fibroblast growth factor 22 isoform X2
translation: MGMGPGRLLSRWPGSRIPRVSVGALGVSTIKPAWSDRMPFPLAAPMGICGLGARSNAWAGAGPRCRLSAWVHPLRAASIPQPPAPIPAGASQASGTGAHGEHRPGRTLVPAAPCPGTEPSCTPPAPSSCARCLPPDPHPPLPYTLRPLQGPAGPGGMVGLRAGSGPWGSAACVGQGHSCQFGENKHEVGVGQRLTACSGKRSLGSVSLQLRSRGQLGQGRAGIKTKPSPGHGFPPPAPDSGCSPCSPLSLCGEGIPPSLPPSLHPSVHVSVCLSGKARRCCPSLVALGGQSRGAGEGPLGEVAHLTAALRCPAGIVEIRSVRVGVVAIRAVHTGFYLAMNKQGRLYGSSAPTASSRSASRRTATTPTRRCAGGTGAAPCSSRSTARAGRSEGARRAGSTSPRTSSPCSSAEPGSQTVLWKKREK
SIO_010081: FGF22
subclass of: SO_0000673
so part of: FGF22
location: join(327134..328173,328444..328678)
location: region:327134-328678:1
so has part: feature:327134-328173:1:exon
so has part: feature:328444-328678:1:exon

XP_038025072.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:327134-328173:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:328444-328678:1:exon

FGF22
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8839
gene: FGF22
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: fibroblast growth factor 22 isoform X3
translation: MGMGPGRLLSRWPGSRIPRVSVGALGVSTIKPAWSDRMPFPLAAPMGICGLGARSNAWAGAGPRCRLSAWVHPLRAASIPQPPAPIPAGASQASGTGAHGEHRPGRTLVPAAPCPGTEPSCTPPAPSSCARCLPPDPHPPLPYTLRPLQGPAGPGGMVGLRAGSGPWGSAACVGQGHSCQFGENKHEVGVGQRLTACSGKRSLGSVSLQLRSRGQLGQGRAGIKTKPSPGHGFPPPAPDSGCSPCSPLSLCGEGIPPSLPPSLHPSVHVSVCLSGKARRCCPSLVALGGQSRGAGEGPLGEVAHLTAALRCPAGIVEIRSVRVGVVAIRAVHTGFYLAMNKQGRLYGSKEFSPNCKFKERIEENGYNTYASLRWRHRGRPMFLSLNSKGRPQRGGQTRRQHLSTHFLPMLIS
SIO_010081: FGF22
subclass of: SO_0000673
so part of: FGF22
location: join(327134..328177,328441..328635)
location: region:327134-328635:1
so has part: feature:327134-328177:1:exon
so has part: feature:328441-328635:1:exon

XP_038025073.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:327134-328177:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:328441-328635:1:exon

FGF22
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8839
gene: FGF22
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: fibroblast growth factor 22 isoform X4
translation: MGMGPGRLLSRWPGSRIPRVSVGALGVSTIKPAWSDRMPFPLAAPMGICGLGARSNAWAGAGPRCRLSAWVHPLRAASIPQPPAPIPAGASQASGTGAHGEHRPGRTLVPAAPCPGTEPSCTPPAPSSCARCLPPDPHPPLPYTLRPLQGPAGPGGMVGLRAGSGPWGSAACVGQGHSCQFGENKHEVGVGQRLTACSGKRSLGSVSLQLRSRGQLGQGRAGIKTKPSPGHGFPPPAPDSGCSPCSPLSLCGEGIPPSLPPSLHPSVHVSVCLSGKARRCCPSLVALGGQSRGAGEGPLGEVAHLTAALRCPAGIVEIRSVRVGVVAIRAVHTGFYLAMNKQGRLYGSEFSPNCKFKERIEENGYNTYASLRWRHRGRPMFLSLNSKGRPQRGGQTRRQHLSTHFLPMLIS
SIO_010081: FGF22
subclass of: SO_0000673
so part of: FGF22
location: join(327134..328177,328444..328635)
location: region:327134-328635:1
so has part: feature:327134-328177:1:exon
so has part: feature:328444-328635:1:exon

XP_038025074.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:327134-328177:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:328444-328635:1:exon

RNF126
type: Gene
subclass of: SO_0000704
RO_0002162: 8839
gene: RNF126
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(331484..339472)
location: region:331484-339472:-1
so has part: feature:331484-339472:-1:exon
subclass of: SO_0000010

101797868
type: Gene
SIO_000068: ncbigene

position:331484:-1
position: 331484
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:339472:-1
position: 339472
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:331484-339472:-1:exon

RNF126
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8839
gene: RNF126
product: ring finger protein 126, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 119 samples with support for all annotated introns
transcript id: XM_027472541.2
SIO_010081: RNF126
subclass of: SO_0000673
so part of: RNF126
location: complement(join(331484..332308,332527..332642,333274..333367,333594..333663,333741..333809,334115..334323,334952..335015,336710..336768,339315..339472))
location: region:331484-339472:-1
so has part: feature:339315-339472:-1:exon
so has part: feature:336710-336768:-1:exon
so has part: feature:334952-335015:-1:exon
so has part: feature:334115-334323:-1:exon
so has part: feature:333741-333809:-1:exon
so has part: feature:333594-333663:-1:exon
so has part: feature:333274-333367:-1:exon
so has part: feature:332527-332642:-1:exon
so has part: feature:331484-332308:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:339315-339472:-1:exon

position:339315:-1
position: 339315
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:336710-336768:-1:exon

position:336710:-1
position: 336710
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:336768:-1
position: 336768
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:334952-335015:-1:exon

position:334952:-1
position: 334952
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:335015:-1
position: 335015
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:334115-334323:-1:exon

position:334115:-1
position: 334115
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:334323:-1
position: 334323
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:333741-333809:-1:exon

position:333741:-1
position: 333741
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:333809:-1
position: 333809
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:333594-333663:-1:exon

position:333594:-1
position: 333594
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:333663:-1
position: 333663
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:333274-333367:-1:exon

position:333274:-1
position: 333274
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:333367:-1
position: 333367
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:332527-332642:-1:exon

position:332527:-1
position: 332527
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:332642:-1
position: 332642
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:331484-332308:-1:exon

position:332308:-1
position: 332308
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

RNF126
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8839
gene: RNF126
product: ring finger protein 126, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 126 samples with support for all annotated introns
transcript id: XM_027472540.2
SIO_010081: RNF126
subclass of: SO_0000673
so part of: RNF126
location: complement(join(331484..332308,332527..332642,333274..333367,333594..333663,333741..333809,334115..334356,334952..335015,336710..336768,339315..339472))
location: region:331484-339472:-1
so has part: feature:339315-339472:-1:exon
so has part: feature:336710-336768:-1:exon
so has part: feature:334952-335015:-1:exon
so has part: feature:334115-334356:-1:exon
so has part: feature:333741-333809:-1:exon
so has part: feature:333594-333663:-1:exon
so has part: feature:333274-333367:-1:exon
so has part: feature:332527-332642:-1:exon
so has part: feature:331484-332308:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:339315-339472:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:336710-336768:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:334952-335015:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:334115-334356:-1:exon

position:334356:-1
position: 334356
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:333741-333809:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:333594-333663:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:333274-333367:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:332527-332642:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:331484-332308:-1:exon

RNF126
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8839
gene: RNF126
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: E3 ubiquitin-protein ligase RNF126 isoform X2
translation: MAEASPQPGRFFCHCCAAEIAPRLPDYICPRCESGFIEELPEEPRNTDNETSSSTSTSDQSRHPFEGYGQFAFGIFDDGFEIPFGSNVQPEDNRDSENRREREHQSRHRYGARQPRARLAARRAAGRHEGVPTLEGIIQQLVNGIIAPTTIPNLGLGPWGVLHSNPMDYAWGANGLDAIITQLLNQFENTGPPPADKEKIQALPTIQITQEHVDSGLECPVCKEDYTVGENVRQLPCNHLFHNSCIVPWLEQHDTCPVCRKSLSGQNTATNPPGLTGMNFSSSSSSSSSSSPSNENSSNNS
SIO_010081: RNF126
subclass of: SO_0000673
so part of: RNF126
location: complement(join(332159..332308,332527..332642,333274..333367,333594..333663,333741..333809,334115..334323,334952..335015,336710..336768,339315..339389))
location: region:332159-339389:-1
so has part: feature:339315-339389:-1:exon
so has part: feature:336710-336768:-1:exon
so has part: feature:334952-335015:-1:exon
so has part: feature:334115-334323:-1:exon
so has part: feature:333741-333809:-1:exon
so has part: feature:333594-333663:-1:exon
so has part: feature:333274-333367:-1:exon
so has part: feature:332527-332642:-1:exon
so has part: feature:332159-332308:-1:exon

XP_027328342.1
type: Protein
SIO_000068: ncbiprotein

position:332159:-1
position: 332159
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:339389:-1
position: 339389
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:339315-339389:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:336710-336768:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:334952-335015:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:334115-334323:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:333741-333809:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:333594-333663:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:333274-333367:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:332527-332642:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:332159-332308:-1:exon

RNF126
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8839
gene: RNF126
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: E3 ubiquitin-protein ligase RNF126 isoform X1
translation: MAEASPQPGRFFCHCCAAEIAPRLPDYICPRCESGFIEELPEEPRNTDNETSSSTSTSDQSRHPFENVDQHLFTLPQGYGQFAFGIFDDGFEIPFGSNVQPEDNRDSENRREREHQSRHRYGARQPRARLAARRAAGRHEGVPTLEGIIQQLVNGIIAPTTIPNLGLGPWGVLHSNPMDYAWGANGLDAIITQLLNQFENTGPPPADKEKIQALPTIQITQEHVDSGLECPVCKEDYTVGENVRQLPCNHLFHNSCIVPWLEQHDTCPVCRKSLSGQNTATNPPGLTGMNFSSSSSSSSSSSPSNENSSNNS
SIO_010081: RNF126
subclass of: SO_0000673
so part of: RNF126
location: complement(join(332159..332308,332527..332642,333274..333367,333594..333663,333741..333809,334115..334356,334952..335015,336710..336768,339315..339389))
location: region:332159-339389:-1
so has part: feature:339315-339389:-1:exon
so has part: feature:336710-336768:-1:exon
so has part: feature:334952-335015:-1:exon
so has part: feature:334115-334356:-1:exon
so has part: feature:333741-333809:-1:exon
so has part: feature:333594-333663:-1:exon
so has part: feature:333274-333367:-1:exon
so has part: feature:332527-332642:-1:exon
so has part: feature:332159-332308:-1:exon

XP_027328341.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:339315-339389:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:336710-336768:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:334952-335015:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:334115-334356:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:333741-333809:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:333594-333663:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:333274-333367:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:332527-332642:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:332159-332308:-1:exon

FSTL3
type: Gene
subclass of: SO_0000704
RO_0002162: 8839
gene: FSTL3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 348322..357494
location: region:348322-357494:1
so has part: feature:348322-357494:1:exon
subclass of: SO_0000010

101797711
type: Gene
SIO_000068: ncbigene

position:348322:1
position: 348322
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:357494:1
position: 357494
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:348322-357494:1:exon

FSTL3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8839
gene: FSTL3
product: follistatin like 3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 7 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 114 samples with support for all annotated introns
transcript id: XM_038169242.1
SIO_010081: FSTL3
subclass of: SO_0000673
so part of: FSTL3
location: join(348322..348476,351866..352051,354529..354744,356060..356287,356386..357494)
location: region:348322-357494:1
so has part: feature:348322-348476:1:exon
so has part: feature:351866-352051:1:exon
so has part: feature:354529-354744:1:exon
so has part: feature:356060-356287:1:exon
so has part: feature:356386-357494:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:348322-348476:1:exon

position:348476:1
position: 348476
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:351866-352051:1:exon

position:351866:1
position: 351866
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:352051:1
position: 352051
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:354529-354744:1:exon

position:354529:1
position: 354529
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:354744:1
position: 354744
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:356060-356287:1:exon

position:356060:1
position: 356060
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:356287:1
position: 356287
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:356386-357494:1:exon

position:356386:1
position: 356386
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

FSTL3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8839
gene: FSTL3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: follistatin-related protein 3
translation: MPLRLALCLLALCGPAGGDAAHGGICWLQQGKEAKCTMILKTGVTWEECCANGNVDVAWSNYTYPGNKISLLGFLGLVTCHPCKESCEGVVCGPDKVCKMKHGRPQCACAPDCSSLPRKLQVCGSDGYTYRDECDLLTAKCRDHPDLEVMYQGKCKKSCSSVVCPGTHTCVVDQTGSAHCVTCRTAPCPEPTSLDHALCGNNNVTYPSACHLRRATCHLGRSIGVRHYGSCSAAAKFSLETDNAEENYV
SIO_010081: FSTL3
subclass of: SO_0000673
so part of: FSTL3
location: join(348410..348476,351866..352051,354529..354744,356060..356287,356386..356438)
location: region:348410-356438:1
so has part: feature:348410-348476:1:exon
so has part: feature:351866-352051:1:exon
so has part: feature:354529-354744:1:exon
so has part: feature:356060-356287:1:exon
so has part: feature:356386-356438:1:exon

XP_038025170.1
type: Protein
SIO_000068: ncbiprotein

position:348410:1
position: 348410
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:356438:1
position: 356438
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:348410-348476:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:351866-352051:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:354529-354744:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:356060-356287:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:356386-356438:1:exon

LOC119714216
type: Gene
subclass of: SO_0000704
RO_0002162: 8839
gene: LOC119714216
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(359359..360498)
location: region:359359-360498:-1
so has part: feature:359359-360498:-1:exon
subclass of: SO_0000010

119714216
type: Gene
SIO_000068: ncbigene

position:359359:-1
position: 359359
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:360498:-1
position: 360498
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:359359-360498:-1:exon

LOC119714216
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8839
gene: LOC119714216
product: serine protease 57-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 104 samples with support for all annotated introns
transcript id: XM_038169118.1
SIO_010081: LOC119714216
subclass of: SO_0000673
so part of: LOC119714216
location: complement(join(359359..359889,359966..360498))
location: region:359359-360498:-1
so has part: feature:359966-360498:-1:exon
so has part: feature:359359-359889:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:359966-360498:-1:exon

position:359966:-1
position: 359966
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:359359-359889:-1:exon

position:359889:-1
position: 359889
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC119714216
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8839
gene: LOC119714216
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: serine protease 57-like
translation: METGTAIVRRSLCRTLWRGRVSANMLCGASRNATLRGVCAGDSGGPLVFKRKVYGIVSFSGQRCGDRRYPDIFTKISNYIDWVHLIVLQHRHPEGQQKHNPGPGAAKGPGAGRLRGTAGGPRHRSGLEAPRRAGKGWDTQAPPQPQGL
SIO_010081: LOC119714216
subclass of: SO_0000673
so part of: LOC119714216
location: complement(join(359563..359889,359966..360085))
location: region:359563-360085:-1
so has part: feature:359966-360085:-1:exon
so has part: feature:359563-359889:-1:exon

XP_038025046.1
type: Protein
SIO_000068: ncbiprotein

position:359563:-1
position: 359563
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:360085:-1
position: 360085
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:359966-360085:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:359563-359889:-1:exon

PALM
type: Gene
subclass of: SO_0000704
RO_0002162: 8839
gene: PALM
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 360622..377392
location: region:360622-377392:1
so has part: feature:360622-377392:1:exon
subclass of: SO_0000010

113845672
type: Gene
SIO_000068: ncbigene

position:360622:1
position: 360622
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:377392:1
position: 377392
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:360622-377392:1:exon

PALM
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8839
gene: PALM
product: paralemmin, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 21 samples with support for all annotated introns
transcript id: XM_038169115.1
SIO_010081: PALM
subclass of: SO_0000673
so part of: PALM
location: join(360622..360689,369755..369803,370583..370663,370774..370904,371518..371644,371798..371819,371977..372036,373042..373173,374584..377392)
location: region:360622-377392:1
so has part: feature:360622-360689:1:exon
so has part: feature:369755-369803:1:exon
so has part: feature:370583-370663:1:exon
so has part: feature:370774-370904:1:exon
so has part: feature:371518-371644:1:exon
so has part: feature:371798-371819:1:exon
so has part: feature:371977-372036:1:exon
so has part: feature:373042-373173:1:exon
so has part: feature:374584-377392:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:360622-360689:1:exon

position:360689:1
position: 360689
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:369755-369803:1:exon

position:369755:1
position: 369755
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:369803:1
position: 369803
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:370583-370663:1:exon

position:370583:1
position: 370583
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:370663:1
position: 370663
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:370774-370904:1:exon

position:370774:1
position: 370774
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:370904:1
position: 370904
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:371518-371644:1:exon

position:371518:1
position: 371518
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:371644:1
position: 371644
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:371798-371819:1:exon

position:371798:1
position: 371798
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:371819:1
position: 371819
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:371977-372036:1:exon

position:371977:1
position: 371977
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:372036:1
position: 372036
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:373042-373173:1:exon

position:373042:1
position: 373042
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:373173:1
position: 373173
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:374584-377392:1:exon

position:374584:1
position: 374584
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

PALM
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8839
gene: PALM
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: paralemmin-1 isoform X2
translation: MDSSTPKTCCDSSGCSSRAVETSTLQQERLQAIAEKRKRQTEIENKRRQLEDDRRQLQHLKSKALRERWLLEGAPSSASEEDEAMKKQMQEDEVKTKELEETIQRLEKELETLENSSSVASTKENLAEVAAVPAKEEKAEIVPNAQKSPLGTAVAKKVSSSPMKAVEGTDMMKAAMYSVEITVEKDRVTGETKVLSSTTLLPQNHCLQGVKVYEDELKVVHAVSAEAGALQNGAHPLSSSEVDELLHKADEVTLSEAKAGEEAAGSAPSSQKPTPRREITGLQAKPRENSTALPPGEGAEPSREQPVTMIFMGYQNVEDENETKKVLGLEGTIKAELVVIEDAESKLEPAGKDHAPPNGTALEPAAAPQQGEEAPGGQKPGANATEAKEAEQDMDAKKQRCKCCTVM
SIO_010081: PALM
subclass of: SO_0000673
so part of: PALM
location: join(360637..360689,369755..369803,370583..370663,370774..370904,371518..371644,371798..371819,371977..372036,373042..373173,374584..375152)
location: region:360637-375152:1
so has part: feature:360637-360689:1:exon
so has part: feature:369755-369803:1:exon
so has part: feature:370583-370663:1:exon
so has part: feature:370774-370904:1:exon
so has part: feature:371518-371644:1:exon
so has part: feature:371798-371819:1:exon
so has part: feature:371977-372036:1:exon
so has part: feature:373042-373173:1:exon
so has part: feature:374584-375152:1:exon

XP_038025043.1
type: Protein
SIO_000068: ncbiprotein

position:360637:1
position: 360637
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:375152:1
position: 375152
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:360637-360689:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:369755-369803:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:370583-370663:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:370774-370904:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:371518-371644:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:371798-371819:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:371977-372036:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:373042-373173:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:374584-375152:1:exon

PALM
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8839
gene: PALM
product: paralemmin, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 116 samples with support for all annotated introns
transcript id: XM_027472536.2
SIO_010081: PALM
subclass of: SO_0000673
so part of: PALM
location: join(362400..362631,369755..369803,370583..370663,370774..370904,371518..371644,371798..371819,371977..372036,373042..373173,374584..377392)
location: region:362400-377392:1
so has part: feature:362400-362631:1:exon
so has part: feature:369755-369803:1:exon
so has part: feature:370583-370663:1:exon
so has part: feature:370774-370904:1:exon
so has part: feature:371518-371644:1:exon
so has part: feature:371798-371819:1:exon
so has part: feature:371977-372036:1:exon
so has part: feature:373042-373173:1:exon
so has part: feature:374584-377392:1:exon

position:362400:1
position: 362400
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:362400-362631:1:exon

position:362631:1
position: 362631
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:369755-369803:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:370583-370663:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:370774-370904:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:371518-371644:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:371798-371819:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:371977-372036:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:373042-373173:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:374584-377392:1:exon

PALM
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8839
gene: PALM
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: paralemmin-1 isoform X3
translation: MEAVETSTLQQERLQAIAEKRKRQTEIENKRRQLEDDRRQLQHLKSKALRERWLLEGAPSSASEEDEAMKKQMQEDEVKTKELEETIQRLEKELETLENSSSVASTKENLAEVAAVPAKEEKAEIVPNAQKSPLGTAVAKKVSSSPMKAVEGTDMMKAAMYSVEITVEKDRVTGETKVLSSTTLLPQNHCLQGVKVYEDELKVVHAVSAEAGALQNGAHPLSSSEVDELLHKADEVTLSEAKAGEEAAGSAPSSQKPTPRREITGLQAKPRENSTALPPGEGAEPSREQPVTMIFMGYQNVEDENETKKVLGLEGTIKAELVVIEDAESKLEPAGKDHAPPNGTALEPAAAPQQGEEAPGGQKPGANATEAKEAEQDMDAKKQRCKCCTVM
SIO_010081: PALM
subclass of: SO_0000673
so part of: PALM
location: join(362627..362631,369755..369803,370583..370663,370774..370904,371518..371644,371798..371819,371977..372036,373042..373173,374584..375152)
location: region:362627-375152:1
so has part: feature:362627-362631:1:exon
so has part: feature:369755-369803:1:exon
so has part: feature:370583-370663:1:exon
so has part: feature:370774-370904:1:exon
so has part: feature:371518-371644:1:exon
so has part: feature:371798-371819:1:exon
so has part: feature:371977-372036:1:exon
so has part: feature:373042-373173:1:exon
so has part: feature:374584-375152:1:exon

XP_027328337.1
type: Protein
SIO_000068: ncbiprotein

position:362627:1
position: 362627
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:362627-362631:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:369755-369803:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:370583-370663:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:370774-370904:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:371518-371644:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:371798-371819:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:371977-372036:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:373042-373173:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:374584-375152:1:exon

PALM
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8839
gene: PALM
product: paralemmin, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 8 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 43 samples with support for all annotated introns
transcript id: XM_038169114.1
SIO_010081: PALM
subclass of: SO_0000673
so part of: PALM
location: join(367043..367116,369755..369803,370583..370663,370774..370904,371518..371644,371798..371819,371977..372036,373042..373173,374584..377392)
location: region:367043-377392:1
so has part: feature:367043-367116:1:exon
so has part: feature:369755-369803:1:exon
so has part: feature:370583-370663:1:exon
so has part: feature:370774-370904:1:exon
so has part: feature:371518-371644:1:exon
so has part: feature:371798-371819:1:exon
so has part: feature:371977-372036:1:exon
so has part: feature:373042-373173:1:exon
so has part: feature:374584-377392:1:exon

position:367043:1
position: 367043
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:367043-367116:1:exon

position:367116:1
position: 367116
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:369755-369803:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:370583-370663:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:370774-370904:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:371518-371644:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:371798-371819:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:371977-372036:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:373042-373173:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:374584-377392:1:exon

PALM
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8839
gene: PALM
product: paralemmin, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 37 samples with support for all annotated introns
transcript id: XM_038169117.1
SIO_010081: PALM
subclass of: SO_0000673
so part of: PALM
location: join(367043..367116,369755..369803,370583..370663,370774..370904,371518..371644,371798..371819,371977..372036,374584..377392)
location: region:367043-377392:1
so has part: feature:367043-367116:1:exon
so has part: feature:369755-369803:1:exon
so has part: feature:370583-370663:1:exon
so has part: feature:370774-370904:1:exon
so has part: feature:371518-371644:1:exon
so has part: feature:371798-371819:1:exon
so has part: feature:371977-372036:1:exon
so has part: feature:374584-377392:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:367043-367116:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:369755-369803:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:370583-370663:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:370774-370904:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:371518-371644:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:371798-371819:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:371977-372036:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:374584-377392:1:exon

PALM
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8839
gene: PALM
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: paralemmin-1 isoform X1
translation: MRAEGSGRSMNLFAGAHETGAVETSTLQQERLQAIAEKRKRQTEIENKRRQLEDDRRQLQHLKSKALRERWLLEGAPSSASEEDEAMKKQMQEDEVKTKELEETIQRLEKELETLENSSSVASTKENLAEVAAVPAKEEKAEIVPNAQKSPLGTAVAKKVSSSPMKAVEGTDMMKAAMYSVEITVEKDRVTGETKVLSSTTLLPQNHCLQGVKVYEDELKVVHAVSAEAGALQNGAHPLSSSEVDELLHKADEVTLSEAKAGEEAAGSAPSSQKPTPRREITGLQAKPRENSTALPPGEGAEPSREQPVTMIFMGYQNVEDENETKKVLGLEGTIKAELVVIEDAESKLEPAGKDHAPPNGTALEPAAAPQQGEEAPGGQKPGANATEAKEAEQDMDAKKQRCKCCTVM
SIO_010081: PALM
subclass of: SO_0000673
so part of: PALM
location: join(367058..367116,369755..369803,370583..370663,370774..370904,371518..371644,371798..371819,371977..372036,373042..373173,374584..375152)
location: region:367058-375152:1
so has part: feature:367058-367116:1:exon
so has part: feature:369755-369803:1:exon
so has part: feature:370583-370663:1:exon
so has part: feature:370774-370904:1:exon
so has part: feature:371518-371644:1:exon
so has part: feature:371798-371819:1:exon
so has part: feature:371977-372036:1:exon
so has part: feature:373042-373173:1:exon
so has part: feature:374584-375152:1:exon

XP_038025042.1
type: Protein
SIO_000068: ncbiprotein

position:367058:1
position: 367058
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:367058-367116:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:369755-369803:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:370583-370663:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:370774-370904:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:371518-371644:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:371798-371819:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:371977-372036:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:373042-373173:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:374584-375152:1:exon

PALM
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8839
gene: PALM
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: paralemmin-1 isoform X4
translation: MRAEGSGRSMNLFAGAHETGAVETSTLQQERLQAIAEKRKRQTEIENKRRQLEDDRRQLQHLKSKALRERWLLEGAPSSASEEDEAMKKQMQEDEVKTKELEETIQRLEKELETLENSSSVASTKENLAEVAAVPAKEEKAEIVPNAQKSPLGTAVAKKVSSSPMKAVEGTDMMKAVVHAVSAEAGALQNGAHPLSSSEVDELLHKADEVTLSEAKAGEEAAGSAPSSQKPTPRREITGLQAKPRENSTALPPGEGAEPSREQPVTMIFMGYQNVEDENETKKVLGLEGTIKAELVVIEDAESKLEPAGKDHAPPNGTALEPAAAPQQGEEAPGGQKPGANATEAKEAEQDMDAKKQRCKCCTVM
SIO_010081: PALM
subclass of: SO_0000673
so part of: PALM
location: join(367058..367116,369755..369803,370583..370663,370774..370904,371518..371644,371798..371819,371977..372036,374584..375152)
location: region:367058-375152:1
so has part: feature:367058-367116:1:exon
so has part: feature:369755-369803:1:exon
so has part: feature:370583-370663:1:exon
so has part: feature:370774-370904:1:exon
so has part: feature:371518-371644:1:exon
so has part: feature:371798-371819:1:exon
so has part: feature:371977-372036:1:exon
so has part: feature:374584-375152:1:exon

XP_038025045.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:367058-367116:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:369755-369803:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:370583-370663:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:370774-370904:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:371518-371644:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:371798-371819:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:371977-372036:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:374584-375152:1:exon

LOC101797898
type: Gene
subclass of: SO_0000704
RO_0002162: 8839
gene: LOC101797898
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 377974..385282
location: region:377974-385282:1
so has part: feature:377974-385282:1:exon
subclass of: SO_0000010

101797898
type: Gene
SIO_000068: ncbigene

position:377974:1
position: 377974
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:385282:1
position: 385282
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:377974-385282:1:exon

LOC101797898
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8839
gene: LOC101797898
product: mitotic spindle positioning, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 29 samples with support for all annotated introns
transcript id: XM_027472522.2
SIO_010081: LOC101797898
subclass of: SO_0000673
so part of: LOC101797898
location: join(377974..378136,381700..383818,384034..384245,384477..384515,384743..385282)
location: region:377974-385282:1
so has part: feature:377974-378136:1:exon
so has part: feature:381700-383818:1:exon
so has part: feature:384034-384245:1:exon
so has part: feature:384477-384515:1:exon
so has part: feature:384743-385282:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:377974-378136:1:exon

position:378136:1
position: 378136
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:381700-383818:1:exon

position:381700:1
position: 381700
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:383818:1
position: 383818
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:384034-384245:1:exon

position:384034:1
position: 384034
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:384245:1
position: 384245
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:384477-384515:1:exon

position:384477:1
position: 384477
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:384515:1
position: 384515
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:384743-385282:1:exon

position:384743:1
position: 384743
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC101797898
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8839
gene: LOC101797898
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: mitotic interactor and substrate of PLK1 isoform X2
translation: MFKYTPPWQVLCATLEPRAQGQQDPALCSTPPQVSPEPEGAREAEQCPQPQEGADLDADSCQDMDRVTRHLVFQLPQTAHRHDHAPADGDDDVFGSSQYGSQRVENGYEWRTRMKSPSYFLDGGKDVWTPSPDRESRLEVVRSGSLYDLRAYRGERKPSRLYEDDEQEQYRLHPPNISPEKAKELEDERREVIRGQVVRKSSTMAERWSSMDELSSINVGAGGQGDAKHKGSSTSSFGIYFDKASSGRAATPIDPESIDREQINFAAARQQFLMLEKTSPGSLLSPGQHAVSPKPEAMTRISRQEWHSPETATKAERGYGDAAVPSQGRTDTSTYQVYNVSYRTPVKAEGRDDAGRFYHTGKTSSLTKASSRDDLDSGLGEMYTEGSTGYVSNGSVEAFNGLVDVRNSSSSPDKELKASNETPIEREIRRALEREENLWKERGIQRLTSSSELVEIQTKPLLSMHASPVPGRKGKDKSRASFYVQREIEQETKREEDLKRQGRLLGLYDRGTQQELDERKKVFEQEETPPPKPAPARRAEERRSWVHEEQPSSHGSGPAEDTGAGRALSTYTVTLTRSVPPAGERGRGEPPVHDHASASAGRWAREDSQGGRLPGSTPSPAAAGVLRKEHFSFPFWKPRISFVDDMGTQSPLRREKGPDGEDGRDEQYTLRTWKPQTSALIEEEIRSDLQREEELQEQRRRRLLFEGSLGSSDGFSRESSHSRHSSAASGASGSYSVSGSPVPTPSSRQAGVLGLVSSFTPLRVAAPGPDSSDSLSPDSAHSSAFEERRRRTKEDGKYAGIEPVDKINTEVVESTRVGRHKSAMAQRWEAGLYVRDED
SIO_010081: LOC101797898
subclass of: SO_0000673
so part of: LOC101797898
location: join(378077..378136,381700..383818,384034..384245,384477..384515,384743..384829)
location: region:378077-384829:1
so has part: feature:378077-378136:1:exon
so has part: feature:381700-383818:1:exon
so has part: feature:384034-384245:1:exon
so has part: feature:384477-384515:1:exon
so has part: feature:384743-384829:1:exon

XP_027328323.2
type: Protein
SIO_000068: ncbiprotein

position:378077:1
position: 378077
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:384829:1
position: 384829
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:378077-378136:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:381700-383818:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:384034-384245:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:384477-384515:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:384743-384829:1:exon

LOC101797898
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8839
gene: LOC101797898
product: mitotic spindle positioning, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 27 samples with support for all annotated introns
transcript id: XM_027472523.2
SIO_010081: LOC101797898
subclass of: SO_0000673
so part of: LOC101797898
location: join(378561..378710,381700..383818,384034..384245,384477..384515,384743..385282)
location: region:378561-385282:1
so has part: feature:378561-378710:1:exon
so has part: feature:381700-383818:1:exon
so has part: feature:384034-384245:1:exon
so has part: feature:384477-384515:1:exon
so has part: feature:384743-385282:1:exon

position:378561:1
position: 378561
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:378561-378710:1:exon

position:378710:1
position: 378710
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:381700-383818:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:384034-384245:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:384477-384515:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:384743-385282:1:exon

LOC101797898
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8839
gene: LOC101797898
product: mitotic spindle positioning, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 114 samples with support for all annotated introns
transcript id: XM_027472521.2
SIO_010081: LOC101797898
subclass of: SO_0000673
so part of: LOC101797898
location: join(379882..380085,381700..383818,384034..384245,384477..384515,384743..385282)
location: region:379882-385282:1
so has part: feature:379882-380085:1:exon
so has part: feature:381700-383818:1:exon
so has part: feature:384034-384245:1:exon
so has part: feature:384477-384515:1:exon
so has part: feature:384743-385282:1:exon

position:379882:1
position: 379882
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:379882-380085:1:exon

position:380085:1
position: 380085
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:381700-383818:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:384034-384245:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:384477-384515:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:384743-385282:1:exon

LOC101797898
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8839
gene: LOC101797898
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: mitotic interactor and substrate of PLK1 isoform X1
translation: MSPAEFLEFLHGAQAELIRATQPWAAPAAPTPHRRPARPLPEDAAQAGATLGHGDPRADGSRTGQQDPALCSTPPQVSPEPEGAREAEQCPQPQEGADLDADSCQDMDRVTRHLVFQLPQTAHRHDHAPADGDDDVFGSSQYGSQRVENGYEWRTRMKSPSYFLDGGKDVWTPSPDRESRLEVVRSGSLYDLRAYRGERKPSRLYEDDEQEQYRLHPPNISPEKAKELEDERREVIRGQVVRKSSTMAERWSSMDELSSINVGAGGQGDAKHKGSSTSSFGIYFDKASSGRAATPIDPESIDREQINFAAARQQFLMLEKTSPGSLLSPGQHAVSPKPEAMTRISRQEWHSPETATKAERGYGDAAVPSQGRTDTSTYQVYNVSYRTPVKAEGRDDAGRFYHTGKTSSLTKASSRDDLDSGLGEMYTEGSTGYVSNGSVEAFNGLVDVRNSSSSPDKELKASNETPIEREIRRALEREENLWKERGIQRLTSSSELVEIQTKPLLSMHASPVPGRKGKDKSRASFYVQREIEQETKREEDLKRQGRLLGLYDRGTQQELDERKKVFEQEETPPPKPAPARRAEERRSWVHEEQPSSHGSGPAEDTGAGRALSTYTVTLTRSVPPAGERGRGEPPVHDHASASAGRWAREDSQGGRLPGSTPSPAAAGVLRKEHFSFPFWKPRISFVDDMGTQSPLRREKGPDGEDGRDEQYTLRTWKPQTSALIEEEIRSDLQREEELQEQRRRRLLFEGSLGSSDGFSRESSHSRHSSAASGASGSYSVSGSPVPTPSSRQAGVLGLVSSFTPLRVAAPGPDSSDSLSPDSAHSSAFEERRRRTKEDGKYAGIEPVDKINTEVVESTRVGRHKSAMAQRWEAGLYVRDED
SIO_010081: LOC101797898
subclass of: SO_0000673
so part of: LOC101797898
location: join(379897..380085,381700..383818,384034..384245,384477..384515,384743..384829)
location: region:379897-384829:1
so has part: feature:379897-380085:1:exon
so has part: feature:381700-383818:1:exon
so has part: feature:384034-384245:1:exon
so has part: feature:384477-384515:1:exon
so has part: feature:384743-384829:1:exon

XP_027328322.2
type: Protein
SIO_000068: ncbiprotein

position:379897:1
position: 379897
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:379897-380085:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:381700-383818:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:384034-384245:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:384477-384515:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:384743-384829:1:exon

LOC101797898
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8839
gene: LOC101797898
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: mitotic interactor and substrate of PLK1 isoform X3
translation: MDRVTRHLVFQLPQTAHRHDHAPADGDDDVFGSSQYGSQRVENGYEWRTRMKSPSYFLDGGKDVWTPSPDRESRLEVVRSGSLYDLRAYRGERKPSRLYEDDEQEQYRLHPPNISPEKAKELEDERREVIRGQVVRKSSTMAERWSSMDELSSINVGAGGQGDAKHKGSSTSSFGIYFDKASSGRAATPIDPESIDREQINFAAARQQFLMLEKTSPGSLLSPGQHAVSPKPEAMTRISRQEWHSPETATKAERGYGDAAVPSQGRTDTSTYQVYNVSYRTPVKAEGRDDAGRFYHTGKTSSLTKASSRDDLDSGLGEMYTEGSTGYVSNGSVEAFNGLVDVRNSSSSPDKELKASNETPIEREIRRALEREENLWKERGIQRLTSSSELVEIQTKPLLSMHASPVPGRKGKDKSRASFYVQREIEQETKREEDLKRQGRLLGLYDRGTQQELDERKKVFEQEETPPPKPAPARRAEERRSWVHEEQPSSHGSGPAEDTGAGRALSTYTVTLTRSVPPAGERGRGEPPVHDHASASAGRWAREDSQGGRLPGSTPSPAAAGVLRKEHFSFPFWKPRISFVDDMGTQSPLRREKGPDGEDGRDEQYTLRTWKPQTSALIEEEIRSDLQREEELQEQRRRRLLFEGSLGSSDGFSRESSHSRHSSAASGASGSYSVSGSPVPTPSSRQAGVLGLVSSFTPLRVAAPGPDSSDSLSPDSAHSSAFEERRRRTKEDGKYAGIEPVDKINTEVVESTRVGRHKSAMAQRWEAGLYVRDED
SIO_010081: LOC101797898
subclass of: SO_0000673
so part of: LOC101797898
location: join(381829..383818,384034..384245,384477..384515,384743..384829)
location: region:381829-384829:1
so has part: feature:381829-383818:1:exon
so has part: feature:384034-384245:1:exon
so has part: feature:384477-384515:1:exon
so has part: feature:384743-384829:1:exon

XP_027328324.2
type: Protein
SIO_000068: ncbiprotein

position:381829:1
position: 381829
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:381829-383818:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:384034-384245:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:384477-384515:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:384743-384829:1:exon

LOC101796873
type: Gene
subclass of: SO_0000704
RO_0002162: 8839
gene: LOC101796873
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(387066..408654)
location: region:387066-408654:-1
so has part: feature:387066-408654:-1:exon
subclass of: SO_0000010

101796873
type: Gene
SIO_000068: ncbigene

position:387066:-1
position: 387066
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:408654:-1
position: 408654
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:387066-408654:-1:exon

LOC101796873
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8839
gene: LOC101796873
product: uncharacterized protein KIAA1958-like, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 16 samples with support for all annotated introns
transcript id: XM_013097085.4
SIO_010081: LOC101796873
subclass of: SO_0000673
so part of: LOC101796873
location: complement(join(387066..388682,391373..392564,399077..399179,408385..408654))
location: region:387066-408654:-1
so has part: feature:408385-408654:-1:exon
so has part: feature:399077-399179:-1:exon
so has part: feature:391373-392564:-1:exon
so has part: feature:387066-388682:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:408385-408654:-1:exon

position:408385:-1
position: 408385
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:399077-399179:-1:exon

position:399077:-1
position: 399077
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:399179:-1
position: 399179
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:391373-392564:-1:exon

position:391373:-1
position: 391373
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:392564:-1
position: 392564
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:387066-388682:-1:exon

position:388682:-1
position: 388682
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC101796873
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8839
gene: LOC101796873
product: uncharacterized protein KIAA1958-like, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 22 samples with support for all annotated introns
transcript id: XM_013097082.4
SIO_010081: LOC101796873
subclass of: SO_0000673
so part of: LOC101796873
location: complement(join(387066..388682,391373..392564,393310..393394,399077..399179,408385..408654))
location: region:387066-408654:-1
so has part: feature:408385-408654:-1:exon
so has part: feature:399077-399179:-1:exon
so has part: feature:393310-393394:-1:exon
so has part: feature:391373-392564:-1:exon
so has part: feature:387066-388682:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:408385-408654:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:399077-399179:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:393310-393394:-1:exon

position:393310:-1
position: 393310
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:393394:-1
position: 393394
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:391373-392564:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:387066-388682:-1:exon

LOC101796873
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8839
gene: LOC101796873
product: uncharacterized protein KIAA1958-like, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
transcript id: XM_038169113.1
SIO_010081: LOC101796873
subclass of: SO_0000673
so part of: LOC101796873
location: complement(join(387066..388682,391373..392564,393310..393394,399077..399179,404117..404239))
location: region:387066-404239:-1
so has part: feature:404117-404239:-1:exon
so has part: feature:399077-399179:-1:exon
so has part: feature:393310-393394:-1:exon
so has part: feature:391373-392564:-1:exon
so has part: feature:387066-388682:-1:exon

position:404239:-1
position: 404239
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:404117-404239:-1:exon

position:404117:-1
position: 404117
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:399077-399179:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:393310-393394:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:391373-392564:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:387066-388682:-1:exon

LOC101796873
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8839
gene: LOC101796873
product: uncharacterized protein KIAA1958-like, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 81 samples with support for all annotated introns
transcript id: XM_021270590.3
SIO_010081: LOC101796873
subclass of: SO_0000673
so part of: LOC101796873
location: complement(join(387066..388682,391373..392925))
location: region:387066-392925:-1
so has part: feature:391373-392925:-1:exon
so has part: feature:387066-388682:-1:exon

position:392925:-1
position: 392925
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:391373-392925:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:387066-388682:-1:exon

LOC101796873
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8839
gene: LOC101796873
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: uncharacterized protein KIAA1958-like isoform X2
translation: MNESVSAERCSDGSSLCMDLSNLVTWAHTHGNICKQLPALEAVQSSGHPSRENSILWMCGGGHAYHWPCGKLHFRSREENEAVEKRKRQTSCEAPSREANSGEKRIRVTSPFERARRGTAATGSRSRSPGVTQQRDDTVYIVHNEPAPRENQKSSKSMKPCFAAEQHVSRGEIKTDAHTVNLGSDEDPQIISDDEQHVSDAENQGDRIRQNIWSDSPPTSCVTAEVDLQMHHDQKTAIPKQPATPTSGFAPTEKPPLALLSIQKSPVSNQKILESSFMHQGPLNPVEFTSETSRARNSTGSATPKEPLKQISVSSTEAKAQLEAPTSVAFFQFETSVDVQQQLQLCCPECGTPGTGFSGNAAENPPEGSKPSVSELTAHHSASLSPENKNLEHSSSNKNGLKKKNRNAGDIKIFRDWLVLHCPSEAREIYKLPPEDLDNYLAWFYNSAKKQNGMDFSANSLYFFQSSIERYLKDHNYEYSVVKGAEFRTSQEALKLKYQHLSQKEREGEWTILENLTDENVDVLRKKGLLSQLTPQGFLHLMLINIIRGFGASTHNHSQNLYWGQLVLRKDEAGLEYLAWKNDLHAEETTGEAAAHLFARPDNPDNCPIQDYKMYAKKRPLDMLHDYDPLYLSPKPLYSMWDQVWYCRKSLTKSKMEKMLKVIIQQVKGTNMKAKK
SIO_010081: LOC101796873
subclass of: SO_0000673
so part of: LOC101796873
location: complement(join(387847..388682,391373..392564,393310..393312))
location: region:387847-393312:-1
so has part: feature:393310-393312:-1:exon
so has part: feature:391373-392564:-1:exon
so has part: feature:387847-388682:-1:exon

XP_012952536.3
type: Protein
SIO_000068: ncbiprotein

position:387847:-1
position: 387847
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:393312:-1
position: 393312
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:393310-393312:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:391373-392564:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:387847-388682:-1:exon

LOC101796873
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8839
gene: LOC101796873
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: uncharacterized protein KIAA1958-like isoform X2
translation: MNESVSAERCSDGSSLCMDLSNLVTWAHTHGNICKQLPALEAVQSSGHPSRENSILWMCGGGHAYHWPCGKLHFRSREENEAVEKRKRQTSCEAPSREANSGEKRIRVTSPFERARRGTAATGSRSRSPGVTQQRDDTVYIVHNEPAPRENQKSSKSMKPCFAAEQHVSRGEIKTDAHTVNLGSDEDPQIISDDEQHVSDAENQGDRIRQNIWSDSPPTSCVTAEVDLQMHHDQKTAIPKQPATPTSGFAPTEKPPLALLSIQKSPVSNQKILESSFMHQGPLNPVEFTSETSRARNSTGSATPKEPLKQISVSSTEAKAQLEAPTSVAFFQFETSVDVQQQLQLCCPECGTPGTGFSGNAAENPPEGSKPSVSELTAHHSASLSPENKNLEHSSSNKNGLKKKNRNAGDIKIFRDWLVLHCPSEAREIYKLPPEDLDNYLAWFYNSAKKQNGMDFSANSLYFFQSSIERYLKDHNYEYSVVKGAEFRTSQEALKLKYQHLSQKEREGEWTILENLTDENVDVLRKKGLLSQLTPQGFLHLMLINIIRGFGASTHNHSQNLYWGQLVLRKDEAGLEYLAWKNDLHAEETTGEAAAHLFARPDNPDNCPIQDYKMYAKKRPLDMLHDYDPLYLSPKPLYSMWDQVWYCRKSLTKSKMEKMLKVIIQQVKGTNMKAKK
SIO_010081: LOC101796873
subclass of: SO_0000673
so part of: LOC101796873
location: complement(join(387847..388682,391373..392564,393310..393312))
location: region:387847-393312:-1
so has part: feature:393310-393312:-1:exon
so has part: feature:391373-392564:-1:exon
so has part: feature:387847-388682:-1:exon

XP_038025041.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:393310-393312:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:391373-392564:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:387847-388682:-1:exon

LOC101796873
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8839
gene: LOC101796873
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: uncharacterized protein KIAA1958-like isoform X1
translation: MFLQNESVSAERCSDGSSLCMDLSNLVTWAHTHGNICKQLPALEAVQSSGHPSRENSILWMCGGGHAYHWPCGKLHFRSREENEAVEKRKRQTSCEAPSREANSGEKRIRVTSPFERARRGTAATGSRSRSPGVTQQRDDTVYIVHNEPAPRENQKSSKSMKPCFAAEQHVSRGEIKTDAHTVNLGSDEDPQIISDDEQHVSDAENQGDRIRQNIWSDSPPTSCVTAEVDLQMHHDQKTAIPKQPATPTSGFAPTEKPPLALLSIQKSPVSNQKILESSFMHQGPLNPVEFTSETSRARNSTGSATPKEPLKQISVSSTEAKAQLEAPTSVAFFQFETSVDVQQQLQLCCPECGTPGTGFSGNAAENPPEGSKPSVSELTAHHSASLSPENKNLEHSSSNKNGLKKKNRNAGDIKIFRDWLVLHCPSEAREIYKLPPEDLDNYLAWFYNSAKKQNGMDFSANSLYFFQSSIERYLKDHNYEYSVVKGAEFRTSQEALKLKYQHLSQKEREGEWTILENLTDENVDVLRKKGLLSQLTPQGFLHLMLINIIRGFGASTHNHSQNLYWGQLVLRKDEAGLEYLAWKNDLHAEETTGEAAAHLFARPDNPDNCPIQDYKMYAKKRPLDMLHDYDPLYLSPKPLYSMWDQVWYCRKSLTKSKMEKMLKVIIQQVKGTNMKAKK
SIO_010081: LOC101796873
subclass of: SO_0000673
so part of: LOC101796873
location: complement(join(387847..388682,391373..392576))
location: region:387847-392576:-1
so has part: feature:391373-392576:-1:exon
so has part: feature:387847-388682:-1:exon

XP_021126265.3
type: Protein
SIO_000068: ncbiprotein

position:392576:-1
position: 392576
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:391373-392576:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:387847-388682:-1:exon

LOC101796873
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8839
gene: LOC101796873
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: uncharacterized protein KIAA1958-like isoform X3
translation: MDLSNLVTWAHTHGNICKQLPALEAVQSSGHPSRENSILWMCGGGHAYHWPCGKLHFRSREENEAVEKRKRQTSCEAPSREANSGEKRIRVTSPFERARRGTAATGSRSRSPGVTQQRDDTVYIVHNEPAPRENQKSSKSMKPCFAAEQHVSRGEIKTDAHTVNLGSDEDPQIISDDEQHVSDAENQGDRIRQNIWSDSPPTSCVTAEVDLQMHHDQKTAIPKQPATPTSGFAPTEKPPLALLSIQKSPVSNQKILESSFMHQGPLNPVEFTSETSRARNSTGSATPKEPLKQISVSSTEAKAQLEAPTSVAFFQFETSVDVQQQLQLCCPECGTPGTGFSGNAAENPPEGSKPSVSELTAHHSASLSPENKNLEHSSSNKNGLKKKNRNAGDIKIFRDWLVLHCPSEAREIYKLPPEDLDNYLAWFYNSAKKQNGMDFSANSLYFFQSSIERYLKDHNYEYSVVKGAEFRTSQEALKLKYQHLSQKEREGEWTILENLTDENVDVLRKKGLLSQLTPQGFLHLMLINIIRGFGASTHNHSQNLYWGQLVLRKDEAGLEYLAWKNDLHAEETTGEAAAHLFARPDNPDNCPIQDYKMYAKKRPLDMLHDYDPLYLSPKPLYSMWDQVWYCRKSLTKSKMEKMLKVIIQQVKGTNMKAKK
SIO_010081: LOC101796873
subclass of: SO_0000673
so part of: LOC101796873
location: complement(join(387847..388682,391373..392516))
location: region:387847-392516:-1
so has part: feature:391373-392516:-1:exon
so has part: feature:387847-388682:-1:exon

XP_012952539.3
type: Protein
SIO_000068: ncbiprotein

position:392516:-1
position: 392516
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:391373-392516:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:387847-388682:-1:exon

PTBP1
type: Gene
subclass of: SO_0000704
RO_0002162: 8839
gene: PTBP1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 408945..438866
location: region:408945-438866:1
so has part: feature:408945-438866:1:exon
subclass of: SO_0000010

101797056
type: Gene
SIO_000068: ncbigene

position:408945:1
position: 408945
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:438866:1
position: 438866
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:408945-438866:1:exon

PTBP1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8839
gene: PTBP1
product: polypyrimidine tract binding protein 1, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, 8 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 122 samples with support for all annotated introns
transcript id: XM_027472532.2
SIO_010081: PTBP1
subclass of: SO_0000673
so part of: PTBP1
location: join(408945..409087,423892..423967,424898..425070,426045..426191,427507..427677,428493..428603,428962..429136,429731..429808,431005..431153,433785..433818,434318..434410,434793..435009,435248..435325,435727..438866)
location: region:408945-438866:1
so has part: feature:408945-409087:1:exon
so has part: feature:423892-423967:1:exon
so has part: feature:424898-425070:1:exon
so has part: feature:426045-426191:1:exon
so has part: feature:427507-427677:1:exon
so has part: feature:428493-428603:1:exon
so has part: feature:428962-429136:1:exon
so has part: feature:429731-429808:1:exon
so has part: feature:431005-431153:1:exon
so has part: feature:433785-433818:1:exon
so has part: feature:434318-434410:1:exon
so has part: feature:434793-435009:1:exon
so has part: feature:435248-435325:1:exon
so has part: feature:435727-438866:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:408945-409087:1:exon

position:409087:1
position: 409087
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:423892-423967:1:exon

position:423892:1
position: 423892
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:423967:1
position: 423967
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:424898-425070:1:exon

position:424898:1
position: 424898
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:425070:1
position: 425070
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:426045-426191:1:exon

position:426045:1
position: 426045
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:426191:1
position: 426191
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:427507-427677:1:exon

position:427507:1
position: 427507
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:427677:1
position: 427677
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:428493-428603:1:exon

position:428493:1
position: 428493
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:428603:1
position: 428603
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:428962-429136:1:exon

position:428962:1
position: 428962
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:429136:1
position: 429136
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:429731-429808:1:exon

position:429731:1
position: 429731
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:429808:1
position: 429808
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:431005-431153:1:exon

position:431005:1
position: 431005
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:431153:1
position: 431153
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:433785-433818:1:exon

position:433785:1
position: 433785
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:433818:1
position: 433818
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:434318-434410:1:exon

position:434318:1
position: 434318
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:434410:1
position: 434410
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:434793-435009:1:exon

position:434793:1
position: 434793
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:435009:1
position: 435009
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:435248-435325:1:exon

position:435248:1
position: 435248
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:435325:1
position: 435325
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:435727-438866:1:exon

position:435727:1
position: 435727
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

PTBP1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8839
gene: PTBP1
product: polypyrimidine tract binding protein 1, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, 8 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 126 samples with support for all annotated introns
transcript id: XM_027472531.2
SIO_010081: PTBP1
subclass of: SO_0000673
so part of: PTBP1
location: join(408950..409087,412924..412954,423892..423967,424898..425070,426045..426191,427507..427677,428493..428603,428962..429136,429731..429808,431005..431153,433785..433818,434318..434410,434793..435009,435248..435325,435727..438866)
location: region:408950-438866:1
so has part: feature:408950-409087:1:exon
so has part: feature:412924-412954:1:exon
so has part: feature:423892-423967:1:exon
so has part: feature:424898-425070:1:exon
so has part: feature:426045-426191:1:exon
so has part: feature:427507-427677:1:exon
so has part: feature:428493-428603:1:exon
so has part: feature:428962-429136:1:exon
so has part: feature:429731-429808:1:exon
so has part: feature:431005-431153:1:exon
so has part: feature:433785-433818:1:exon
so has part: feature:434318-434410:1:exon
so has part: feature:434793-435009:1:exon
so has part: feature:435248-435325:1:exon
so has part: feature:435727-438866:1:exon

position:408950:1
position: 408950
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:408950-409087:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:412924-412954:1:exon

position:412924:1
position: 412924
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:412954:1
position: 412954
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:423892-423967:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:424898-425070:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:426045-426191:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:427507-427677:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:428493-428603:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:428962-429136:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:429731-429808:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:431005-431153:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:433785-433818:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:434318-434410:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:434793-435009:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:435248-435325:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:435727-438866:1:exon

PTBP1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8839
gene: PTBP1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: polypyrimidine tract-binding protein 1 isoform X1
translation: MDGIVQDITVGTKRGSDELFSTCVTNGPFIMSSNSSSAANGNDSKKFKGDSRSAGVPSRVIHVRKLPSDVTEAEVISLGLPFGKVTNLLMLKGKNQAFIEMNTEEAANTMVNYYTTVTPVLRSQPIYIQFSNHKELKTDNSPNQARAQAALQAVNSVQSGNLALSASAAAVDAGMAMAGQSPVLRIIVENLFYPVTLDVLHQIFSKFGTVLKIITFTKNNQFQALLQYADPMSAQHAKLSLDGQNIYNACCTLRIDFSKLTSLNVKYNNDKSRDYTRPDLPSGDNQPSLDQTMAAAFGAPGIISASPYAGAGFPPTFAIPQAAGLSVPNVHGALAPLAIPSAAAAAAAAGRIAIPGLTGAGNSVLLVSNLNPERVTPQCLFILFGVYGDVQRVKILFNKKENALVQMADGNQAQLAMSHLNGQKLHGKPIRITLSKHQTVQLPRDGQEDHGLTKDYGNSPLHRFKKPGSKNFQNIFPPSATLHLSNIPPSITEEDLKMLFSSNGGMVKGFKFFQKDRKMALIQMGSVEEAIQSLIDLHNHDLGENHHLRVSFSKSTI
SIO_010081: PTBP1
subclass of: SO_0000673
so part of: PTBP1
location: join(409080..409087,412924..412954,423892..423967,424898..425070,426045..426191,427507..427677,428493..428603,428962..429136,429731..429808,431005..431153,433785..433818,434318..434410,434793..435009,435248..435325,435727..435859)
location: region:409080-435859:1
so has part: feature:409080-409087:1:exon
so has part: feature:412924-412954:1:exon
so has part: feature:423892-423967:1:exon
so has part: feature:424898-425070:1:exon
so has part: feature:426045-426191:1:exon
so has part: feature:427507-427677:1:exon
so has part: feature:428493-428603:1:exon
so has part: feature:428962-429136:1:exon
so has part: feature:429731-429808:1:exon
so has part: feature:431005-431153:1:exon
so has part: feature:433785-433818:1:exon
so has part: feature:434318-434410:1:exon
so has part: feature:434793-435009:1:exon
so has part: feature:435248-435325:1:exon
so has part: feature:435727-435859:1:exon

XP_027328332.1
type: Protein
SIO_000068: ncbiprotein

position:409080:1
position: 409080
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:435859:1
position: 435859
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:409080-409087:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:412924-412954:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:423892-423967:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:424898-425070:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:426045-426191:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:427507-427677:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:428493-428603:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:428962-429136:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:429731-429808:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:431005-431153:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:433785-433818:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:434318-434410:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:434793-435009:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:435248-435325:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:435727-435859:1:exon

PTBP1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8839
gene: PTBP1
product: polypyrimidine tract binding protein 1, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 59 samples with support for all annotated introns
transcript id: XM_038169066.1
SIO_010081: PTBP1
subclass of: SO_0000673
so part of: PTBP1
location: join(414505..414661,423892..423967,424898..425070,426045..426191,427507..427677,428493..428603,428962..429136,429731..429808,431005..431153,433785..433818,434318..434410,434793..435009,435248..435325,435727..438866)
location: region:414505-438866:1
so has part: feature:414505-414661:1:exon
so has part: feature:423892-423967:1:exon
so has part: feature:424898-425070:1:exon
so has part: feature:426045-426191:1:exon
so has part: feature:427507-427677:1:exon
so has part: feature:428493-428603:1:exon
so has part: feature:428962-429136:1:exon
so has part: feature:429731-429808:1:exon
so has part: feature:431005-431153:1:exon
so has part: feature:433785-433818:1:exon
so has part: feature:434318-434410:1:exon
so has part: feature:434793-435009:1:exon
so has part: feature:435248-435325:1:exon
so has part: feature:435727-438866:1:exon

position:414505:1
position: 414505
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:414505-414661:1:exon

position:414661:1
position: 414661
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:423892-423967:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:424898-425070:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:426045-426191:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:427507-427677:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:428493-428603:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:428962-429136:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:429731-429808:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:431005-431153:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:433785-433818:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:434318-434410:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:434793-435009:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:435248-435325:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:435727-438866:1:exon

PTBP1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8839
gene: PTBP1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: polypyrimidine tract-binding protein 1 isoform X2
translation: MSSNSSSAANGNDSKKFKGDSRSAGVPSRVIHVRKLPSDVTEAEVISLGLPFGKVTNLLMLKGKNQAFIEMNTEEAANTMVNYYTTVTPVLRSQPIYIQFSNHKELKTDNSPNQARAQAALQAVNSVQSGNLALSASAAAVDAGMAMAGQSPVLRIIVENLFYPVTLDVLHQIFSKFGTVLKIITFTKNNQFQALLQYADPMSAQHAKLSLDGQNIYNACCTLRIDFSKLTSLNVKYNNDKSRDYTRPDLPSGDNQPSLDQTMAAAFGAPGIISASPYAGAGFPPTFAIPQAAGLSVPNVHGALAPLAIPSAAAAAAAAGRIAIPGLTGAGNSVLLVSNLNPERVTPQCLFILFGVYGDVQRVKILFNKKENALVQMADGNQAQLAMSHLNGQKLHGKPIRITLSKHQTVQLPRDGQEDHGLTKDYGNSPLHRFKKPGSKNFQNIFPPSATLHLSNIPPSITEEDLKMLFSSNGGMVKGFKFFQKDRKMALIQMGSVEEAIQSLIDLHNHDLGENHHLRVSFSKSTI
SIO_010081: PTBP1
subclass of: SO_0000673
so part of: PTBP1
location: join(423943..423967,424898..425070,426045..426191,427507..427677,428493..428603,428962..429136,429731..429808,431005..431153,433785..433818,434318..434410,434793..435009,435248..435325,435727..435859)
location: region:423943-435859:1
so has part: feature:423943-423967:1:exon
so has part: feature:424898-425070:1:exon
so has part: feature:426045-426191:1:exon
so has part: feature:427507-427677:1:exon
so has part: feature:428493-428603:1:exon
so has part: feature:428962-429136:1:exon
so has part: feature:429731-429808:1:exon
so has part: feature:431005-431153:1:exon
so has part: feature:433785-433818:1:exon
so has part: feature:434318-434410:1:exon
so has part: feature:434793-435009:1:exon
so has part: feature:435248-435325:1:exon
so has part: feature:435727-435859:1:exon

XP_027328333.1
type: Protein
SIO_000068: ncbiprotein

position:423943:1
position: 423943
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:423943-423967:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:424898-425070:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:426045-426191:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:427507-427677:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:428493-428603:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:428962-429136:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:429731-429808:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:431005-431153:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:433785-433818:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:434318-434410:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:434793-435009:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:435248-435325:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:435727-435859:1:exon

PTBP1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8839
gene: PTBP1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: polypyrimidine tract-binding protein 1 isoform X2
translation: MSSNSSSAANGNDSKKFKGDSRSAGVPSRVIHVRKLPSDVTEAEVISLGLPFGKVTNLLMLKGKNQAFIEMNTEEAANTMVNYYTTVTPVLRSQPIYIQFSNHKELKTDNSPNQARAQAALQAVNSVQSGNLALSASAAAVDAGMAMAGQSPVLRIIVENLFYPVTLDVLHQIFSKFGTVLKIITFTKNNQFQALLQYADPMSAQHAKLSLDGQNIYNACCTLRIDFSKLTSLNVKYNNDKSRDYTRPDLPSGDNQPSLDQTMAAAFGAPGIISASPYAGAGFPPTFAIPQAAGLSVPNVHGALAPLAIPSAAAAAAAAGRIAIPGLTGAGNSVLLVSNLNPERVTPQCLFILFGVYGDVQRVKILFNKKENALVQMADGNQAQLAMSHLNGQKLHGKPIRITLSKHQTVQLPRDGQEDHGLTKDYGNSPLHRFKKPGSKNFQNIFPPSATLHLSNIPPSITEEDLKMLFSSNGGMVKGFKFFQKDRKMALIQMGSVEEAIQSLIDLHNHDLGENHHLRVSFSKSTI
SIO_010081: PTBP1
subclass of: SO_0000673
so part of: PTBP1
location: join(423943..423967,424898..425070,426045..426191,427507..427677,428493..428603,428962..429136,429731..429808,431005..431153,433785..433818,434318..434410,434793..435009,435248..435325,435727..435859)
location: region:423943-435859:1
so has part: feature:423943-423967:1:exon
so has part: feature:424898-425070:1:exon
so has part: feature:426045-426191:1:exon
so has part: feature:427507-427677:1:exon
so has part: feature:428493-428603:1:exon
so has part: feature:428962-429136:1:exon
so has part: feature:429731-429808:1:exon
so has part: feature:431005-431153:1:exon
so has part: feature:433785-433818:1:exon
so has part: feature:434318-434410:1:exon
so has part: feature:434793-435009:1:exon
so has part: feature:435248-435325:1:exon
so has part: feature:435727-435859:1:exon

XP_038024994.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:423943-423967:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:424898-425070:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:426045-426191:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:427507-427677:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:428493-428603:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:428962-429136:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:429731-429808:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:431005-431153:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:433785-433818:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:434318-434410:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:434793-435009:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:435248-435325:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:435727-435859:1:exon

PLPPR3
type: Gene
subclass of: SO_0000704
RO_0002162: 8839
gene: PLPPR3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(442625..447053)
location: region:442625-447053:-1
so has part: feature:442625-447053:-1:exon
subclass of: SO_0000010

106020560
type: Gene
SIO_000068: ncbigene

position:442625:-1
position: 442625
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:447053:-1
position: 447053
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:442625-447053:-1:exon

PLPPR3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8839
gene: PLPPR3
product: phospholipid phosphatase related 3, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 96% coverage of the annotated genomic feature by RNAseq alignments, including 43 samples with support for all annotated introns
transcript id: XM_038169069.1
SIO_010081: PLPPR3
subclass of: SO_0000673
so part of: PLPPR3
location: complement(join(442625..444702,444777..445128,445203..445398,445666..445795,445899..446084,446295..446392,446946..447053))
location: region:442625-447053:-1
so has part: feature:446946-447053:-1:exon
so has part: feature:446295-446392:-1:exon
so has part: feature:445899-446084:-1:exon
so has part: feature:445666-445795:-1:exon
so has part: feature:445203-445398:-1:exon
so has part: feature:444777-445128:-1:exon
so has part: feature:442625-444702:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:446946-447053:-1:exon

position:446946:-1
position: 446946
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:446295-446392:-1:exon

position:446295:-1
position: 446295
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:446392:-1
position: 446392
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:445899-446084:-1:exon

position:445899:-1
position: 445899
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:446084:-1
position: 446084
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:445666-445795:-1:exon

position:445666:-1
position: 445666
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:445795:-1
position: 445795
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:445203-445398:-1:exon

position:445203:-1
position: 445203
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:445398:-1
position: 445398
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:444777-445128:-1:exon

position:444777:-1
position: 444777
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:445128:-1
position: 445128
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:442625-444702:-1:exon

position:444702:-1
position: 444702
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

PLPPR3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8839
gene: PLPPR3
product: phospholipid phosphatase related 3, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 96% coverage of the annotated genomic feature by RNAseq alignments, including 63 samples with support for all annotated introns
transcript id: XM_038169068.1
SIO_010081: PLPPR3
subclass of: SO_0000673
so part of: PLPPR3
location: complement(join(442625..444702,444777..445128,445203..445398,445666..445795,445899..446084,446295..446581))
location: region:442625-446581:-1
so has part: feature:446295-446581:-1:exon
so has part: feature:445899-446084:-1:exon
so has part: feature:445666-445795:-1:exon
so has part: feature:445203-445398:-1:exon
so has part: feature:444777-445128:-1:exon
so has part: feature:442625-444702:-1:exon

position:446581:-1
position: 446581
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:446295-446581:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:445899-446084:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:445666-445795:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:445203-445398:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:444777-445128:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:442625-444702:-1:exon

PLPPR3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8839
gene: PLPPR3
product: phospholipid phosphatase related 3, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 8 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 63 samples with support for all annotated introns
transcript id: XM_027472528.2
SIO_010081: PLPPR3
subclass of: SO_0000673
so part of: PLPPR3
location: complement(join(442625..444702,444777..444950,445071..445128,445203..445398,445666..445795,445899..446084,446295..446570))
location: region:442625-446570:-1
so has part: feature:446295-446570:-1:exon
so has part: feature:445899-446084:-1:exon
so has part: feature:445666-445795:-1:exon
so has part: feature:445203-445398:-1:exon
so has part: feature:445071-445128:-1:exon
so has part: feature:444777-444950:-1:exon
so has part: feature:442625-444702:-1:exon

position:446570:-1
position: 446570
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:446295-446570:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:445899-446084:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:445666-445795:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:445203-445398:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:445071-445128:-1:exon

position:445071:-1
position: 445071
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:444777-444950:-1:exon

position:444950:-1
position: 444950
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:442625-444702:-1:exon

PLPPR3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8839
gene: PLPPR3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: phospholipid phosphatase-related protein type 3 isoform X3
translation: MAGTPARPSTMISPKDKAKVPKDSMTLLPCFYFVELPIVASSIVTLYFLELTDLFKPAKVGFQCYDRALSMPYVETNEELIPLLMLLSLAFAAPAASIMVGEGIVYCLQSRLKGRAGAEGSINAGGCNFNSFLRRTVRFVGVHVFGLCATALVTDVIQLATGYHAPFFLTVCKPNYTLLGTPCDANPYITQDICSGTDKHAILSARKTFPSQHATLSAFAAVYVSMYFNSIISDSTKLLKPILVFAFAIAAGICGLTQITQYRSHPADVYVGFLIGSGIAAYLAYHAVGNFRAPTERAPALAPAKDALRALTQRGHDSVYHQNKSVSTDELNPQTRLEEAARPVPREKNSLGSLKRASVDVDLLAPRSPMGKENMVTFSNTLPRVNTPSMDDPARRHMTIHVPVDASRSKQLITEWKQKSLEGRSMTLAEEAGALGRGAGDADEDVPPSLYPTVQARPAERAAMGPRVLIQPRPGASQLVHIPEESQAGAGGAAGGGAAVRAKWVMVAEKGGAQRVANPPRLMQVIAMSKQQSMVSVTPKHSETSSSSTSSDSSQYRSPSERDSSSIITIDAHAPHHPVVHLSAGNGPWEWKSAQKGPEGPDAYELGEMGKDFRGFRPAKSAGVSPGSSVSDIEQDEPRYGSLATINVAAGGGGERGDGPPEGLLGTASRESTLRRKPAEKDGHTDSEADNYYRKMQASRRFKD
SIO_010081: PLPPR3
subclass of: SO_0000673
so part of: PLPPR3
location: complement(join(443437..444702,444777..444950,445071..445128,445203..445398,445666..445795,445899..446084,446295..446399))
location: region:443437-446399:-1
so has part: feature:446295-446399:-1:exon
so has part: feature:445899-446084:-1:exon
so has part: feature:445666-445795:-1:exon
so has part: feature:445203-445398:-1:exon
so has part: feature:445071-445128:-1:exon
so has part: feature:444777-444950:-1:exon
so has part: feature:443437-444702:-1:exon

XP_027328329.2
type: Protein
SIO_000068: ncbiprotein

position:443437:-1
position: 443437
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:446399:-1
position: 446399
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:446295-446399:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:445899-446084:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:445666-445795:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:445203-445398:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:445071-445128:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:444777-444950:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:443437-444702:-1:exon

PLPPR3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8839
gene: PLPPR3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: phospholipid phosphatase-related protein type 3 isoform X1
translation: MAGTPARPSTMISPKDKAKVPKDSMTLLPCFYFVELPIVASSIVTLYFLELTDLFKPAKVGFQCYDRALSMPYVETNEELIPLLMLLSLAFAAPAASIMVGEGIVYCLQSRLKGRAGAEGSINAGGCNFNSFLRRTVRFVGVHVFGLCATALVTDVIQLATGYHAPFFLTVCKPNYTLLGTPCDANPYITQDICSGTDKHAILSARKTFPSQHATLSAFAAVYVSVSPGTASRHTLQGCLSPAEPCVAGGKGSGCRCPDVLFPPQMYFNSIISDSTKLLKPILVFAFAIAAGICGLTQITQYRSHPADVYVGFLIGSGIAAYLAYHAVGNFRAPTERAPALAPAKDALRALTQRGHDSVYHQNKSVSTDELNPQTRLEEAARPVPREKNSLGSLKRASVDVDLLAPRSPMGKENMVTFSNTLPRVNTPSMDDPARRHMTIHVPVDASRSKQLITEWKQKSLEGRSMTLAEEAGALGRGAGDADEDVPPSLYPTVQARPAERAAMGPRVLIQPRPGASQLVHIPEESQAGAGGAAGGGAAVRAKWVMVAEKGGAQRVANPPRLMQVIAMSKQQSMVSVTPKHSETSSSSTSSDSSQYRSPSERDSSSIITIDAHAPHHPVVHLSAGNGPWEWKSAQKGPEGPDAYELGEMGKDFRGFRPAKSAGVSPGSSVSDIEQDEPRYGSLATINVAAGGGGERGDGPPEGLLGTASRESTLRRKPAEKDGHTDSEADNYYRKMQASRRFKD
SIO_010081: PLPPR3
subclass of: SO_0000673
so part of: PLPPR3
location: complement(join(443437..444702,444777..445128,445203..445398,445666..445795,445899..446084,446295..446399))
location: region:443437-446399:-1
so has part: feature:446295-446399:-1:exon
so has part: feature:445899-446084:-1:exon
so has part: feature:445666-445795:-1:exon
so has part: feature:445203-445398:-1:exon
so has part: feature:444777-445128:-1:exon
so has part: feature:443437-444702:-1:exon

XP_038024996.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:446295-446399:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:445899-446084:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:445666-445795:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:445203-445398:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:444777-445128:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:443437-444702:-1:exon

PLPPR3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8839
gene: PLPPR3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: phospholipid phosphatase-related protein type 3 isoform X2
translation: MISPKDKAKVPKDSMTLLPCFYFVELPIVASSIVTLYFLELTDLFKPAKVGFQCYDRALSMPYVETNEELIPLLMLLSLAFAAPAASIMVGEGIVYCLQSRLKGRAGAEGSINAGGCNFNSFLRRTVRFVGVHVFGLCATALVTDVIQLATGYHAPFFLTVCKPNYTLLGTPCDANPYITQDICSGTDKHAILSARKTFPSQHATLSAFAAVYVSVSPGTASRHTLQGCLSPAEPCVAGGKGSGCRCPDVLFPPQMYFNSIISDSTKLLKPILVFAFAIAAGICGLTQITQYRSHPADVYVGFLIGSGIAAYLAYHAVGNFRAPTERAPALAPAKDALRALTQRGHDSVYHQNKSVSTDELNPQTRLEEAARPVPREKNSLGSLKRASVDVDLLAPRSPMGKENMVTFSNTLPRVNTPSMDDPARRHMTIHVPVDASRSKQLITEWKQKSLEGRSMTLAEEAGALGRGAGDADEDVPPSLYPTVQARPAERAAMGPRVLIQPRPGASQLVHIPEESQAGAGGAAGGGAAVRAKWVMVAEKGGAQRVANPPRLMQVIAMSKQQSMVSVTPKHSETSSSSTSSDSSQYRSPSERDSSSIITIDAHAPHHPVVHLSAGNGPWEWKSAQKGPEGPDAYELGEMGKDFRGFRPAKSAGVSPGSSVSDIEQDEPRYGSLATINVAAGGGGERGDGPPEGLLGTASRESTLRRKPAEKDGHTDSEADNYYRKMQASRRFKD
SIO_010081: PLPPR3
subclass of: SO_0000673
so part of: PLPPR3
location: complement(join(443437..444702,444777..445128,445203..445398,445666..445795,445899..446084,446295..446369))
location: region:443437-446369:-1
so has part: feature:446295-446369:-1:exon
so has part: feature:445899-446084:-1:exon
so has part: feature:445666-445795:-1:exon
so has part: feature:445203-445398:-1:exon
so has part: feature:444777-445128:-1:exon
so has part: feature:443437-444702:-1:exon

XP_038024997.1
type: Protein
SIO_000068: ncbiprotein

position:446369:-1
position: 446369
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:446295-446369:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:445899-446084:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:445666-445795:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:445203-445398:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:444777-445128:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:443437-444702:-1:exon

PLPPR3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8839
gene: PLPPR3
product: phospholipid phosphatase related 3, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 31 samples with support for all annotated introns
transcript id: XM_038169070.1
SIO_010081: PLPPR3
subclass of: SO_0000673
so part of: PLPPR3
location: complement(join(443492..444702,444777..444950,445071..445128,445203..445398,445674..445795,445899..446084,446295..446575))
location: region:443492-446575:-1
so has part: feature:446295-446575:-1:exon
so has part: feature:445899-446084:-1:exon
so has part: feature:445674-445795:-1:exon
so has part: feature:445203-445398:-1:exon
so has part: feature:445071-445128:-1:exon
so has part: feature:444777-444950:-1:exon
so has part: feature:443492-444702:-1:exon

position:443492:-1
position: 443492
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:446575:-1
position: 446575
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:446295-446575:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:445899-446084:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:445674-445795:-1:exon

position:445674:-1
position: 445674
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:445203-445398:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:445071-445128:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:444777-444950:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:443492-444702:-1:exon

PLPPR3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8839
gene: PLPPR3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: phospholipid phosphatase-related protein type 3 isoform X4
translation: MAGTPARPSTMISPKDKAKVPKDSMTLLPCFYFVELPIVASSIVTLYFLELTDLFKPAKVGFQCYDRALSMPYVETNEELIPLLMLLSLAFAAPAASIMVGEGIVYCLQSRLKGRAGAEGSINAGGCNFNSFLRRTVRCPRVRALCHRPGDRCDPAGHRLPRALLPDRLQAQLHAAGHPLRRQPLHHPGHLLGHGQARHPVRQEDVPVPARDAVGVRGRLRLDVFQLHHLGQHQAPQAHPGLRLRHRRRHLRPDADHAVPQPPRRRLRGLPDRLGHRRLPGVPRRGQLPRPHGEGPGPGAGQGRAAGADAAGPRLRVPPEQVGEHRRAEPADAAGGGGAAGAAGEELPGQPEARQRGRGPAGPPQPHGQGEHGDLQQHPAPRQHPLHGRPRAAPHDHPRPRGRLPLQAAHHRVEAEVSGGPQHDAGGGGGRAGPGRRGRRRGRAPVPLPHGAGAPGRAGGHGAPRAHPAPAGRLAAGAHPRGEPGGCRRGGRRRGGREGQVGDGGGEGGGAAGGQPPAPHAGHRHVQAAEHGVRHPQALGDVLVLHQLRLLAVPLALGARQLQHHHHRRPRAPPPRRAPLRRQRALGVEVGPEGARGAGRLRAGRDGQGFPGLPPGQERRGVPRLLRQRHRAG
SIO_010081: PLPPR3
subclass of: SO_0000673
so part of: PLPPR3
location: complement(join(443642..444702,444777..444950,445071..445128,445203..445398,445674..445795,445899..446084,446295..446399))
location: region:443642-446399:-1
so has part: feature:446295-446399:-1:exon
so has part: feature:445899-446084:-1:exon
so has part: feature:445674-445795:-1:exon
so has part: feature:445203-445398:-1:exon
so has part: feature:445071-445128:-1:exon
so has part: feature:444777-444950:-1:exon
so has part: feature:443642-444702:-1:exon

XP_038024998.1
type: Protein
SIO_000068: ncbiprotein

position:443642:-1
position: 443642
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:446295-446399:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:445899-446084:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:445674-445795:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:445203-445398:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:445071-445128:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:444777-444950:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:443642-444702:-1:exon

CFD
type: Gene
subclass of: SO_0000704
RO_0002162: 8839
gene: CFD
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 448975..451157
location: region:448975-451157:1
so has part: feature:448975-451157:1:exon
subclass of: SO_0000010

113845674
type: Gene
SIO_000068: ncbigene

position:448975:1
position: 448975
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:451157:1
position: 451157
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:448975-451157:1:exon

CFD
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8839
gene: CFD
product: complement factor D
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 ESTs, 10 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 120 samples with support for all annotated introns
transcript id: XM_027472539.2
SIO_010081: CFD
subclass of: SO_0000673
so part of: CFD
location: join(448975..449136,449347..449500,449675..449819,450152..450409,450670..451157)
location: region:448975-451157:1
so has part: feature:448975-449136:1:exon
so has part: feature:449347-449500:1:exon
so has part: feature:449675-449819:1:exon
so has part: feature:450152-450409:1:exon
so has part: feature:450670-451157:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:448975-449136:1:exon

position:449136:1
position: 449136
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:449347-449500:1:exon

position:449347:1
position: 449347
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:449500:1
position: 449500
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:449675-449819:1:exon

position:449675:1
position: 449675
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:449819:1
position: 449819
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:450152-450409:1:exon

position:450152:1
position: 450152
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:450409:1
position: 450409
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:450670-451157:1:exon

position:450670:1
position: 450670
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

CFD
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8839
gene: CFD
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: complement factor D
translation: MGPCPAPVLVLALFLQLGAVVNAQPRGRILGGYEARPHLRPYMASLQLDGQHVCGGFLIAEQWVLSAAHCTEGTNGKLFQVLLGAHSLTEPEPHKRLYRVRAQIAHPGSNIHNNRDDLLLLQLEEKAELNAHVKVLPFQREDRDVEADTLCEAAGWGTVTHSGRRPDKLQQVERPVISRELCNHRTRHDQTITEKMMCTDSRKKDTCKGDSGGPLVCNGVAEGVVTAGSRVCGNYKKPAIYTRIAPYATWIDGVMASAAGDKAGDEAGDEAAR
SIO_010081: CFD
subclass of: SO_0000673
so part of: CFD
location: join(449070..449136,449347..449500,449675..449819,450152..450409,450670..450867)
location: region:449070-450867:1
so has part: feature:449070-449136:1:exon
so has part: feature:449347-449500:1:exon
so has part: feature:449675-449819:1:exon
so has part: feature:450152-450409:1:exon
so has part: feature:450670-450867:1:exon

XP_027328340.1
type: Protein
SIO_000068: ncbiprotein

position:449070:1
position: 449070
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:450867:1
position: 450867
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:449070-449136:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:449347-449500:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:449675-449819:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:450152-450409:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:450670-450867:1:exon

MED16
type: Gene
subclass of: SO_0000704
RO_0002162: 8839
gene: MED16
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(452788..461316)
location: region:452788-461316:-1
so has part: feature:452788-461316:-1:exon
subclass of: SO_0000010

101798437
type: Gene
SIO_000068: ncbigene

position:452788:-1
position: 452788
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:461316:-1
position: 461316
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:452788-461316:-1:exon

MED16
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8839
gene: MED16
product: mediator complex subunit 16
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 12 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 126 samples with support for all annotated introns
transcript id: XM_027472525.2
SIO_010081: MED16
subclass of: SO_0000673
so part of: MED16
location: complement(join(452788..453586,454677..454760,455100..455316,455573..455765,455926..456059,456267..456477,456882..457088,457331..457542,457670..457825,458458..458563,459202..459633,460201..460370,460502..460609,461069..461316))
location: region:452788-461316:-1
so has part: feature:461069-461316:-1:exon
so has part: feature:460502-460609:-1:exon
so has part: feature:460201-460370:-1:exon
so has part: feature:459202-459633:-1:exon
so has part: feature:458458-458563:-1:exon
so has part: feature:457670-457825:-1:exon
so has part: feature:457331-457542:-1:exon
so has part: feature:456882-457088:-1:exon
so has part: feature:456267-456477:-1:exon
so has part: feature:455926-456059:-1:exon
so has part: feature:455573-455765:-1:exon
so has part: feature:455100-455316:-1:exon
so has part: feature:454677-454760:-1:exon
so has part: feature:452788-453586:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:461069-461316:-1:exon

position:461069:-1
position: 461069
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:460502-460609:-1:exon

position:460502:-1
position: 460502
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:460609:-1
position: 460609
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:460201-460370:-1:exon

position:460201:-1
position: 460201
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:460370:-1
position: 460370
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:459202-459633:-1:exon

position:459202:-1
position: 459202
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:459633:-1
position: 459633
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:458458-458563:-1:exon

position:458458:-1
position: 458458
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:458563:-1
position: 458563
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:457670-457825:-1:exon

position:457670:-1
position: 457670
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:457825:-1
position: 457825
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:457331-457542:-1:exon

position:457331:-1
position: 457331
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:457542:-1
position: 457542
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:456882-457088:-1:exon

position:456882:-1
position: 456882
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:457088:-1
position: 457088
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:456267-456477:-1:exon

position:456267:-1
position: 456267
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:456477:-1
position: 456477
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:455926-456059:-1:exon

position:455926:-1
position: 455926
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:456059:-1
position: 456059
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:455573-455765:-1:exon

position:455573:-1
position: 455573
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:455765:-1
position: 455765
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:455100-455316:-1:exon

position:455100:-1
position: 455100
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:455316:-1
position: 455316
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:454677-454760:-1:exon

position:454677:-1
position: 454677
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:454760:-1
position: 454760
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:452788-453586:-1:exon

position:453586:-1
position: 453586
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

MED16
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8839
gene: MED16
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: mediator of RNA polymerase II transcription subunit 16
translation: MDLAYVCEWERRPKSNHCPSIPLVCAWSCRNLIAFTTDLRNEEEKDLTHMVHIIDTEHPWDVYSVNSGHAEVITCLEWDQSGSRLLSADADGHIKCWSMTDHLANSWENTVGSMVEGDPVVALSWLHNGVKLALHVEKSGASNFGEKFSRVKFSPSLTLFGGKPMEGWIAVTISGLVTVSLLKPNGQVLTSTESLCRLRCRVALADVAFTGGGNIVVATSDGSSTSPVQFYKVCVSVVNEKCKIDTEILPSLFMRCTTDPARKDKYPAITHLKFLARDMSEQVLLCASNQNSSIVECWSLRKEGLPVNNIFQQISPVVGDKQPMILKWRILSATNDLDRVSAVALPKLPISLTNTDLKVANDTKFFPGLGLALAFHDGSVHIVHRLSLQMMAVFYGSSSQRPVDEQTIKRQRTAGPLVHFKAMQLSWTSLALAGIDSHGKLSMLRISPSMGHVLDMNTSLRHLLFLLEYCMVTGYDWWDILLHVQPNMVQNLVEKLHEEYMRQSAALQQVLSTRIVAMKASLCKLSSSTIARVCDYHAKLFLIAISCTLKSLLRPHFLNTPDKSPGDRLTEICSKITDIDIDKVMINLKTEEFVLEMTTLQSLQQLIQWVGDFVLYLLASLPNQGSPVRPGHSFLRDGASLGMFRELMVVIRIWGLLKPSCLPVYTATSDTQDSMSLLFRLLTKLWLCCREENHITEPDDTLIDECCLLPSQLLIPNIDWLPINDGIISKLQNKQLVRLQFGKAPGLVGHTVSSQFDAFVRAPGQPKIDHLRRLHLGAYPTEECKSCTRCGCVTMLKSPNKVTAVKQWEQRWIKNCLCGGLWRRMPLSYS
SIO_010081: MED16
subclass of: SO_0000673
so part of: MED16
location: complement(join(453460..453586,454677..454760,455100..455316,455573..455765,455926..456059,456267..456477,456882..457088,457331..457542,457670..457825,458458..458563,459202..459633,460201..460370,460502..460609,461069..461204))
location: region:453460-461204:-1
so has part: feature:461069-461204:-1:exon
so has part: feature:460502-460609:-1:exon
so has part: feature:460201-460370:-1:exon
so has part: feature:459202-459633:-1:exon
so has part: feature:458458-458563:-1:exon
so has part: feature:457670-457825:-1:exon
so has part: feature:457331-457542:-1:exon
so has part: feature:456882-457088:-1:exon
so has part: feature:456267-456477:-1:exon
so has part: feature:455926-456059:-1:exon
so has part: feature:455573-455765:-1:exon
so has part: feature:455100-455316:-1:exon
so has part: feature:454677-454760:-1:exon
so has part: feature:453460-453586:-1:exon

XP_027328326.1
type: Protein
SIO_000068: ncbiprotein

position:453460:-1
position: 453460
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:461204:-1
position: 461204
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:461069-461204:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:460502-460609:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:460201-460370:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:459202-459633:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:458458-458563:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:457670-457825:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:457331-457542:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:456882-457088:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:456267-456477:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:455926-456059:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:455573-455765:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:455100-455316:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:454677-454760:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:453460-453586:-1:exon

LOC113845708
type: Gene
subclass of: SO_0000704
RO_0002162: 8839
gene: LOC113845708
note: Derived by automated computational analysis using gene prediction method: cmsearch.
so part of: sequence
location: 461619..461725
location: region:461619-461725:1
so has part: feature:461619-461725:1:exon
subclass of: SO_0000623

113845708
type: Gene
SIO_000068: ncbigene

position:461619:1
position: 461619
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:461725:1
position: 461725
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:461619-461725:1:exon

LOC113845708
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 8839
nc RNA class: snRNA
gene: LOC113845708
product: U6 spliceosomal RNA
inference: COORDINATES: nucleotide motif:Rfam:12.0:RF00026
inference: COORDINATES: profile:INFERNAL:1.1.1
note: Derived by automated computational analysis using gene prediction method: cmsearch.
transcript id: XR_003501438.2
SIO_010081: LOC113845708
subclass of: SO_0000673
so part of: LOC113845708
location: 461619..461725
location: region:461619-461725:1
so has part: feature:461619-461725:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:461619-461725:1:exon

R3HDM4
type: Gene
subclass of: SO_0000704
RO_0002162: 8839
gene: R3HDM4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(462291..466613)
location: region:462291-466613:-1
so has part: feature:462291-466613:-1:exon
subclass of: SO_0000010

113845675
type: Gene
SIO_000068: ncbigene

position:462291:-1
position: 462291
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:466613:-1
position: 466613
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:462291-466613:-1:exon

R3HDM4
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8839
gene: R3HDM4
product: R3H domain containing 4, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 114 samples with support for all annotated introns
transcript id: XM_038169071.1
SIO_010081: R3HDM4
subclass of: SO_0000673
so part of: R3HDM4
location: complement(join(462291..462677,462948..463003,463186..463271,464313..464398,464666..464789,465109..465227,465371..465525,466456..466613))
location: region:462291-466613:-1
so has part: feature:466456-466613:-1:exon
so has part: feature:465371-465525:-1:exon
so has part: feature:465109-465227:-1:exon
so has part: feature:464666-464789:-1:exon
so has part: feature:464313-464398:-1:exon
so has part: feature:463186-463271:-1:exon
so has part: feature:462948-463003:-1:exon
so has part: feature:462291-462677:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:466456-466613:-1:exon

position:466456:-1
position: 466456
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:465371-465525:-1:exon

position:465371:-1
position: 465371
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:465525:-1
position: 465525
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:465109-465227:-1:exon

position:465109:-1
position: 465109
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:465227:-1
position: 465227
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:464666-464789:-1:exon

position:464666:-1
position: 464666
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:464789:-1
position: 464789
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:464313-464398:-1:exon

position:464313:-1
position: 464313
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:464398:-1
position: 464398
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:463186-463271:-1:exon

position:463186:-1
position: 463186
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:463271:-1
position: 463271
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:462948-463003:-1:exon

position:462948:-1
position: 462948
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:463003:-1
position: 463003
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:462291-462677:-1:exon

position:462677:-1
position: 462677
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

R3HDM4
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8839
gene: R3HDM4
product: R3H domain containing 4, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 12 samples with support for all annotated introns
transcript id: XM_038169072.1
SIO_010081: R3HDM4
subclass of: SO_0000673
so part of: R3HDM4
location: complement(join(462291..462677,462948..463003,463186..463271,464313..464398,464666..464789,465109..465227,465371..465525,466480..466608))
location: region:462291-466608:-1
so has part: feature:466480-466608:-1:exon
so has part: feature:465371-465525:-1:exon
so has part: feature:465109-465227:-1:exon
so has part: feature:464666-464789:-1:exon
so has part: feature:464313-464398:-1:exon
so has part: feature:463186-463271:-1:exon
so has part: feature:462948-463003:-1:exon
so has part: feature:462291-462677:-1:exon

position:466608:-1
position: 466608
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:466480-466608:-1:exon

position:466480:-1
position: 466480
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:465371-465525:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:465109-465227:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:464666-464789:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:464313-464398:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:463186-463271:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:462948-463003:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:462291-462677:-1:exon

R3HDM4
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8839
gene: R3HDM4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: R3H domain-containing protein 4 isoform X2
translation: MVLLPRIEDCLPPLESSPSKRFSPSKRKQYYINKAVRNSDLTPKAKGRKSLQRLENTRYLMTLLERDECGSEEAELAHAATPSIFAEACNNETYVEIWNDFMNRSGEEQERVLRYLEEEARQKQERKLPVKNKEKWKEHPAYTPKECFQRISRRLRSTLKRGRIPMGTLEGLEEELLAFFSVTPHSVYTALMDNSFERLLLHALCQYMDLVSASSDIEGKRQMKVSNKHRVFLPPQLLLSDYLGQMS
SIO_010081: R3HDM4
subclass of: SO_0000673
so part of: R3HDM4
location: complement(join(462574..462677,462948..463003,463186..463271,464313..464398,464666..464789,465109..465227,465371..465525,466480..466493))
location: region:462574-466493:-1
so has part: feature:466480-466493:-1:exon
so has part: feature:465371-465525:-1:exon
so has part: feature:465109-465227:-1:exon
so has part: feature:464666-464789:-1:exon
so has part: feature:464313-464398:-1:exon
so has part: feature:463186-463271:-1:exon
so has part: feature:462948-463003:-1:exon
so has part: feature:462574-462677:-1:exon

XP_038025000.1
type: Protein
SIO_000068: ncbiprotein

position:462574:-1
position: 462574
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:466493:-1
position: 466493
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:466480-466493:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:465371-465525:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:465109-465227:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:464666-464789:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:464313-464398:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:463186-463271:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:462948-463003:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:462574-462677:-1:exon

R3HDM4
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8839
gene: R3HDM4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: R3H domain-containing protein 4 isoform X1
translation: MVLLPRGPAGPLPRIEDCLPPLESSPSKRFSPSKRKQYYINKAVRNSDLTPKAKGRKSLQRLENTRYLMTLLERDECGSEEAELAHAATPSIFAEACNNETYVEIWNDFMNRSGEEQERVLRYLEEEARQKQERKLPVKNKEKWKEHPAYTPKECFQRISRRLRSTLKRGRIPMGTLEGLEEELLAFFSVTPHSVYTALMDNSFERLLLHALCQYMDLVSASSDIEGKRQMKVSNKHRVFLPPQLLLSDYLGQMS
SIO_010081: R3HDM4
subclass of: SO_0000673
so part of: R3HDM4
location: complement(join(462574..462677,462948..463003,463186..463271,464313..464398,464666..464789,465109..465227,465371..465525,466456..466493))
location: region:462574-466493:-1
so has part: feature:466456-466493:-1:exon
so has part: feature:465371-465525:-1:exon
so has part: feature:465109-465227:-1:exon
so has part: feature:464666-464789:-1:exon
so has part: feature:464313-464398:-1:exon
so has part: feature:463186-463271:-1:exon
so has part: feature:462948-463003:-1:exon
so has part: feature:462574-462677:-1:exon

XP_038024999.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:466456-466493:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:465371-465525:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:465109-465227:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:464666-464789:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:464313-464398:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:463186-463271:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:462948-463003:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:462574-462677:-1:exon

ARID3A
type: Gene
subclass of: SO_0000704
RO_0002162: 8839
gene: ARID3A
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 466969..490614
location: region:466969-490614:1
so has part: feature:466969-490614:1:exon
subclass of: SO_0000010

113845650
type: Gene
SIO_000068: ncbigene

position:466969:1
position: 466969
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:490614:1
position: 490614
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:466969-490614:1:exon

ARID3A
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8839
gene: ARID3A
product: AT-rich interaction domain 3A
exception: unclassified transcription discrepancy
note: The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: deleted 2 bases in 2 codons; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments, including 108 samples with support for all annotated introns
transcript id: XM_027472341.2
SIO_010081: ARID3A
subclass of: SO_0000673
so part of: ARID3A
location: join(466969..467116,468470..469373,470023..470362,487463..487535,488622..488805,488900..489147,489638..489934,490034..490123,490247..490614)
location: region:466969-490614:1
so has part: feature:466969-467116:1:exon
so has part: feature:468470-469373:1:exon
so has part: feature:470023-470362:1:exon
so has part: feature:487463-487535:1:exon
so has part: feature:488622-488805:1:exon
so has part: feature:488900-489147:1:exon
so has part: feature:489638-489934:1:exon
so has part: feature:490034-490123:1:exon
so has part: feature:490247-490614:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:466969-467116:1:exon

position:467116:1
position: 467116
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:468470-469373:1:exon

position:468470:1
position: 468470
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:469373:1
position: 469373
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:470023-470362:1:exon

position:470023:1
position: 470023
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:470362:1
position: 470362
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:487463-487535:1:exon

position:487463:1
position: 487463
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:487535:1
position: 487535
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:488622-488805:1:exon

position:488622:1
position: 488622
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:488805:1
position: 488805
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:488900-489147:1:exon

position:488900:1
position: 488900
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:489147:1
position: 489147
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:489638-489934:1:exon

position:489638:1
position: 489638
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:489934:1
position: 489934
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:490034-490123:1:exon

position:490034:1
position: 490034
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:490123:1
position: 490123
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:490247-490614:1:exon

position:490247:1
position: 490247
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

ARID3A
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8839
gene: ARID3A
exception: unclassified translation discrepancy
note: The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: deleted 2 bases in 2 codons; Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: LOW QUALITY PROTEIN: AT-rich interactive domain-containing protein 3A
translation: MKLQAVMENLQRQQRARLQQALEARQQEQQQQQQQRSTPPPAPAQPPPAPGQTPARGRGPDLAPAPSEEGAEPENAHIQRAQMAALAAMRAAAAGLSHSSSPGLSEESQASEEEERGEEEEEEEEDGGYQQEMGSEDEEDLKGKWDEEDFEEDLGEEEEEEEEEEEEEEEEEEDYEEEEDMGEEGLSSAEAVRTGPGSLLLRKPPAPQHCRGEAQRPPGGQERLPAGLGPQGHAQLPQPAPDHGDWTYEEQFKQLYELDGDPRRKEFLDDLFSFMQKRGTPVNRIPIMAKQVLDLYMLYMLVTEKGGLVEVINKKLWREITKGLNLPTSITSAAFTLRTQYMKYLYPYECEKRGLSNPNELQAAIDSNRREGRRQGFGSSLFTYSPGGTHGLLSSPKLPVPALGLASATNGGSIAPVQKIKKEEDAPIPISMPSRLPVSLAGHPVVAAQAAAVQVAAAAQAVALEQLREKLESGEPPEKKMALVTDEQQRLMQRALQQNLLAMTAQLPMSIRINSQGTRSPENRQDSSGSLSSNGTNSISMSVEINGIVYTGVLFAQTPGPSSSSSSSSSSAYSKGNGSNGGGRSSGNGGGGAGGGGGSAPPAAPAALAVPPPSSTSNNASP
SIO_010081: ARID3A
subclass of: SO_0000673
so part of: ARID3A
location: join(468951..469373,470023..470362,487463..487535,488622..488805,488900..489147,489638..489934,490034..490123,490247..490462)
location: region:468951-490462:1
so has part: feature:468951-469373:1:exon
so has part: feature:470023-470362:1:exon
so has part: feature:487463-487535:1:exon
so has part: feature:488622-488805:1:exon
so has part: feature:488900-489147:1:exon
so has part: feature:489638-489934:1:exon
so has part: feature:490034-490123:1:exon
so has part: feature:490247-490462:1:exon

XP_027328142.2
type: Protein
SIO_000068: ncbiprotein

position:468951:1
position: 468951
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:490462:1
position: 490462
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:468951-469373:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:470023-470362:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:487463-487535:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:488622-488805:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:488900-489147:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:489638-489934:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:490034-490123:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:490247-490462:1:exon

WDR18
type: Gene
subclass of: SO_0000704
RO_0002162: 8839
gene: WDR18
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 493776..503207
location: region:493776-503207:1
so has part: feature:493776-503207:1:exon
subclass of: SO_0000010

101798610
type: Gene
SIO_000068: ncbigene

position:493776:1
position: 493776
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:503207:1
position: 503207
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:493776-503207:1:exon

WDR18
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8839
gene: WDR18
product: WD repeat domain 18
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 126 samples with support for all annotated introns
transcript id: XM_027472535.2
SIO_010081: WDR18
subclass of: SO_0000673
so part of: WDR18
location: join(493776..493985,495153..495263,496986..497119,497253..497394,498054..498197,498364..498428,498535..498659,501127..501293,501856..501924,502216..503207)
location: region:493776-503207:1
so has part: feature:493776-493985:1:exon
so has part: feature:495153-495263:1:exon
so has part: feature:496986-497119:1:exon
so has part: feature:497253-497394:1:exon
so has part: feature:498054-498197:1:exon
so has part: feature:498364-498428:1:exon
so has part: feature:498535-498659:1:exon
so has part: feature:501127-501293:1:exon
so has part: feature:501856-501924:1:exon
so has part: feature:502216-503207:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:493776-493985:1:exon

position:493985:1
position: 493985
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:495153-495263:1:exon

position:495153:1
position: 495153
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:495263:1
position: 495263
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:496986-497119:1:exon

position:496986:1
position: 496986
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:497119:1
position: 497119
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:497253-497394:1:exon

position:497253:1
position: 497253
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:497394:1
position: 497394
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:498054-498197:1:exon

position:498054:1
position: 498054
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:498197:1
position: 498197
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:498364-498428:1:exon

position:498364:1
position: 498364
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:498428:1
position: 498428
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:498535-498659:1:exon

position:498535:1
position: 498535
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:498659:1
position: 498659
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:501127-501293:1:exon

position:501127:1
position: 501127
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:501293:1
position: 501293
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:501856-501924:1:exon

position:501856:1
position: 501856
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:501924:1
position: 501924
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:502216-503207:1:exon

position:502216:1
position: 502216
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

WDR18
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8839
gene: WDR18
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: WD repeat-containing protein 18
translation: MAAPMEVALVSDAAGPLCNCSVWELHSGSALPGYRGGNSGPRGLALLGGEHLLGAQLGKSYINVWELQRKDQLQQKIICPGPVTCLTASPNGLYILAGVAESIYLWEVSNGNLLAILNRHYQDLTCLCFTDDSSHFLSGAKDCLALVWNLYSVLQAEPSQIPDPRHVWSRHSLPITDMCCGFGGPLARAATASLDQTAKLWEVASGELLLSVLFDVGIMAVTLDLSEYHMFCGGMDGSIFQVDLCAWPVQRDRTFQTERENGKIFKGHRNQVTCLSVSTDGSLLLSGSHDETVRLWDIQSKQCLKTMNHKGPVTNAFIVLAPANMFNPDGKPSVPLPKFSKHLYGTESSDEQGSEGVTLRLGLHQQDSGESYLEKGERMYAQMCSTREKNLVGDQEHLTIQVSELEEEVSTLRKINKNLFDFSARIITKPAK
SIO_010081: WDR18
subclass of: SO_0000673
so part of: WDR18
location: join(493776..493985,495153..495263,496986..497119,497253..497394,498054..498197,498364..498428,498535..498659,501127..501293,501856..501924,502216..502347)
location: region:493776-502347:1
so has part: feature:493776-493985:1:exon
so has part: feature:495153-495263:1:exon
so has part: feature:496986-497119:1:exon
so has part: feature:497253-497394:1:exon
so has part: feature:498054-498197:1:exon
so has part: feature:498364-498428:1:exon
so has part: feature:498535-498659:1:exon
so has part: feature:501127-501293:1:exon
so has part: feature:501856-501924:1:exon
so has part: feature:502216-502347:1:exon

XP_027328336.1
type: Protein
SIO_000068: ncbiprotein

position:502347:1
position: 502347
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:493776-493985:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:495153-495263:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:496986-497119:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:497253-497394:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:498054-498197:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:498364-498428:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:498535-498659:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:501127-501293:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:501856-501924:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:502216-502347:1:exon

GRIN3B
type: Gene
subclass of: SO_0000704
RO_0002162: 8839
gene: GRIN3B
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 504675..510753
location: region:504675-510753:1
so has part: feature:504675-510753:1:exon
subclass of: SO_0000010

101798799
type: Gene
SIO_000068: ncbigene

position:504675:1
position: 504675
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:510753:1
position: 510753
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:504675-510753:1:exon

GRIN3B
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8839
gene: GRIN3B
product: glutamate ionotropic receptor NMDA type subunit 3B, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
transcript id: XM_038169020.1
SIO_010081: GRIN3B
subclass of: SO_0000673
so part of: GRIN3B
location: join(504675..505178,506391..506989,507398..508448,508573..508700,508829..508944,509108..509259,509339..509503,509593..509660,509778..510073,510215..510753)
location: region:504675-510753:1
so has part: feature:504675-505178:1:exon
so has part: feature:506391-506989:1:exon
so has part: feature:507398-508448:1:exon
so has part: feature:508573-508700:1:exon
so has part: feature:508829-508944:1:exon
so has part: feature:509108-509259:1:exon
so has part: feature:509339-509503:1:exon
so has part: feature:509593-509660:1:exon
so has part: feature:509778-510073:1:exon
so has part: feature:510215-510753:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:504675-505178:1:exon

position:505178:1
position: 505178
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:506391-506989:1:exon

position:506391:1
position: 506391
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:506989:1
position: 506989
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:507398-508448:1:exon

position:507398:1
position: 507398
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:508448:1
position: 508448
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:508573-508700:1:exon

position:508573:1
position: 508573
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:508700:1
position: 508700
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:508829-508944:1:exon

position:508829:1
position: 508829
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:508944:1
position: 508944
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:509108-509259:1:exon

position:509108:1
position: 509108
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:509259:1
position: 509259
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:509339-509503:1:exon

position:509339:1
position: 509339
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:509503:1
position: 509503
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:509593-509660:1:exon

position:509593:1
position: 509593
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:509660:1
position: 509660
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:509778-510073:1:exon

position:509778:1
position: 509778
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:510073:1
position: 510073
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:510215-510753:1:exon

position:510215:1
position: 510215
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

GRIN3B
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8839
gene: GRIN3B
product: glutamate ionotropic receptor NMDA type subunit 3B, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 7 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 12 samples with support for all annotated introns
transcript id: XM_038169019.1
SIO_010081: GRIN3B
subclass of: SO_0000673
so part of: GRIN3B
location: join(504677..505178,506391..506989,507398..508448,508555..508700,508829..508944,509108..509259,509339..509503,509593..509660,509778..510073,510215..510753)
location: region:504677-510753:1
so has part: feature:504677-505178:1:exon
so has part: feature:506391-506989:1:exon
so has part: feature:507398-508448:1:exon
so has part: feature:508555-508700:1:exon
so has part: feature:508829-508944:1:exon
so has part: feature:509108-509259:1:exon
so has part: feature:509339-509503:1:exon
so has part: feature:509593-509660:1:exon
so has part: feature:509778-510073:1:exon
so has part: feature:510215-510753:1:exon

position:504677:1
position: 504677
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:504677-505178:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:506391-506989:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:507398-508448:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:508555-508700:1:exon

position:508555:1
position: 508555
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:508829-508944:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:509108-509259:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:509339-509503:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:509593-509660:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:509778-510073:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:510215-510753:1:exon

GRIN3B
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8839
gene: GRIN3B
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: glutamate receptor ionotropic, NMDA 3B isoform X1
translation: MAGLGALWLLAAALGAAGGHPQPCRVPARAGPAVRLGALLPPAAPGRVRAALAGAAGGPGGAGGSGGLGGAALPHNRSLELVAGAPAARDPGSLARWLCGALGGRGVAAVLAVPRSRRELLQLDFLAAALRLPFVSVLDTRGPLPFRPQSPFHFHMDRQSSLETLVEVLASILQANDWHETSLVLCHPWDVSGFLGLWARRTQLLLRTVLDLGYLDEPRASRYLRQRGERLKALSSPVLVLGCDLRHARLLFRVVEQSGLLPQEFHWILGSPLRAGELQTEGLPLGLLAFGEVGRPPLEPFVQDAVELVSRAIASAAAVRPDLALVPTTVNCNGRLREGTESSGRFLSRFMSNTSFHGRTGHVQVQNGTRVQTEHQYRVWSLLRDSLGQPTWVTMGAWRHGKLELEEGAWQSHLQRKNLAKGGGGARAKLRVVTLVEHPFVFTREVDEDGSCPAGQLCLDPGTNDSAVLDALFEELGAGNGSVPREYKKCCYGYCIDLLEKLAEDVPFDFELYIVGDGKYGAWKNGRWTGLVGDLLSGTAHMAVTSFSINSARSKVIDFTSPFFSTSLGILVRTKDTASPIGAFMWPLHWTMWVGIFVALHMTALFLTLYEWKSPYGMTPHGRNRMKIFSYSSALNLCYAILFGRTVSSKTPKCCTGRFLMNLWAIFCLLVLSSYTANLAAVMVGEKTFEELSGIHDPKLHHPSQGFRFGTVWESSAEEYIKKSFPEMHEYMRRYNVPTTPAGVTMLKTEPPKLNAFIMDKSLLDYEVSIDSDCKLLTVGKPFAIEGYGIGLPQNSPLTSNLSEFISRYKSAGFMDLLHDKWYKMVPCGKRVFAVTETLQMGIYHFSGLFVLLCIGLSGSLLTSLGEHVFYRLVLPRIKRKKKFNYWLHTSQKIHRALNTGVEEQKGQKLSLAERCAPEQSPGVQPWPRLRQEGRRVRFQLDAVPPEGEGTSGPRGNGPLQGAGDELRELEEKIEAMREQLRAGPGEEERAGGLPWARPGAAGHRPRSGPGRTGRRRPRRRRAPEQEHGAAPGAAGGSRSPAEPQGTGWWHRRWPLPQPAPLPPRQETK
SIO_010081: GRIN3B
subclass of: SO_0000673
so part of: GRIN3B
location: join(504732..505178,506391..506989,507398..508448,508555..508700,508829..508944,509108..509259,509339..509503,509593..509660,509778..510073,510215..510384)
location: region:504732-510384:1
so has part: feature:504732-505178:1:exon
so has part: feature:506391-506989:1:exon
so has part: feature:507398-508448:1:exon
so has part: feature:508555-508700:1:exon
so has part: feature:508829-508944:1:exon
so has part: feature:509108-509259:1:exon
so has part: feature:509339-509503:1:exon
so has part: feature:509593-509660:1:exon
so has part: feature:509778-510073:1:exon
so has part: feature:510215-510384:1:exon

XP_038024947.1
type: Protein
SIO_000068: ncbiprotein

position:504732:1
position: 504732
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:510384:1
position: 510384
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:504732-505178:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:506391-506989:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:507398-508448:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:508555-508700:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:508829-508944:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:509108-509259:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:509339-509503:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:509593-509660:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:509778-510073:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:510215-510384:1:exon

GRIN3B
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8839
gene: GRIN3B
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: glutamate receptor ionotropic, NMDA 3B isoform X2
translation: MAGLGALWLLAAALGAAGGHPQPCRVPARAGPAVRLGALLPPAAPGRVRAALAGAAGGPGGAGGSGGLGGAALPHNRSLELVAGAPAARDPGSLARWLCGALGGRGVAAVLAVPRSRRELLQLDFLAAALRLPFVSVLDTRGPLPFRPQSPFHFHMDRQSSLETLVEVLASILQANDWHETSLVLCHPWDVSGFLGLWARRTQLLLRTVLDLGYLDEPRASRYLRQRGERLKALSSPVLVLGCDLRHARLLFRVVEQSGLLPQEFHWILGSPLRAGELQTEGLPLGLLAFGEVGRPPLEPFVQDAVELVSRAIASAAAVRPDLALVPTTVNCNGRLREGTESSGRFLSRFMSNTSFHGRTGHVQVQNGTRVQTEHQYRVWSLLRDSLGQPTWVTMGAWRHGKLELEEGAWQSHLQRKNLAKGGGGARAKLRVVTLVEHPFVFTREVDEDGSCPAGQLCLDPGTNDSAVLDALFEELGAGNGSVPREYKKCCYGYCIDLLEKLAEDVPFDFELYIVGDGKYGAWKNGRWTGLVGDLLSGTAHMAVTSFSINSARSKVIDFTSPFFSTSLGILVRTKDTASPIGAFMWPLHWTMWVGIFVALHMTALFLTLYEWKSPYGMTPHGRNRMKIFSYSSALNLCYAILFGRTVSSKTPKCCTGRFLMNLWAIFCLLVLSSYTANLAAVMVGEKTFEELSGIHDPKGFRFGTVWESSAEEYIKKSFPEMHEYMRRYNVPTTPAGVTMLKTEPPKLNAFIMDKSLLDYEVSIDSDCKLLTVGKPFAIEGYGIGLPQNSPLTSNLSEFISRYKSAGFMDLLHDKWYKMVPCGKRVFAVTETLQMGIYHFSGLFVLLCIGLSGSLLTSLGEHVFYRLVLPRIKRKKKFNYWLHTSQKIHRALNTGVEEQKGQKLSLAERCAPEQSPGVQPWPRLRQEGRRVRFQLDAVPPEGEGTSGPRGNGPLQGAGDELRELEEKIEAMREQLRAGPGEEERAGGLPWARPGAAGHRPRSGPGRTGRRRPRRRRAPEQEHGAAPGAAGGSRSPAEPQGTGWWHRRWPLPQPAPLPPRQETK
SIO_010081: GRIN3B
subclass of: SO_0000673
so part of: GRIN3B
location: join(504732..505178,506391..506989,507398..508448,508573..508700,508829..508944,509108..509259,509339..509503,509593..509660,509778..510073,510215..510384)
location: region:504732-510384:1
so has part: feature:504732-505178:1:exon
so has part: feature:506391-506989:1:exon
so has part: feature:507398-508448:1:exon
so has part: feature:508573-508700:1:exon
so has part: feature:508829-508944:1:exon
so has part: feature:509108-509259:1:exon
so has part: feature:509339-509503:1:exon
so has part: feature:509593-509660:1:exon
so has part: feature:509778-510073:1:exon
so has part: feature:510215-510384:1:exon

XP_038024948.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:504732-505178:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:506391-506989:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:507398-508448:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:508573-508700:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:508829-508944:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:509108-509259:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:509339-509503:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:509593-509660:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:509778-510073:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:510215-510384:1:exon

TMEM259
type: Gene
subclass of: SO_0000704
RO_0002162: 8839
gene: TMEM259
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(511199..525041)
location: region:511199-525041:-1
so has part: feature:511199-525041:-1:exon
subclass of: SO_0000010

101798989
type: Gene
SIO_000068: ncbigene

position:511199:-1
position: 511199
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:525041:-1
position: 525041
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:511199-525041:-1:exon

TMEM259
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8839
gene: TMEM259
product: transmembrane protein 259, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 124 samples with support for all annotated introns
transcript id: XM_027472527.2
SIO_010081: TMEM259
subclass of: SO_0000673
so part of: TMEM259
location: complement(join(511199..513167,513983..514082,514492..514624,515131..515214,515529..515586,516504..516604,516941..517063,518421..518531,520624..520738,521050..521316,524517..525041))
location: region:511199-525041:-1
so has part: feature:524517-525041:-1:exon
so has part: feature:521050-521316:-1:exon
so has part: feature:520624-520738:-1:exon
so has part: feature:518421-518531:-1:exon
so has part: feature:516941-517063:-1:exon
so has part: feature:516504-516604:-1:exon
so has part: feature:515529-515586:-1:exon
so has part: feature:515131-515214:-1:exon
so has part: feature:514492-514624:-1:exon
so has part: feature:513983-514082:-1:exon
so has part: feature:511199-513167:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:524517-525041:-1:exon

position:524517:-1
position: 524517
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:521050-521316:-1:exon

position:521050:-1
position: 521050
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:521316:-1
position: 521316
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:520624-520738:-1:exon

position:520624:-1
position: 520624
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:520738:-1
position: 520738
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:518421-518531:-1:exon

position:518421:-1
position: 518421
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:518531:-1
position: 518531
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:516941-517063:-1:exon

position:516941:-1
position: 516941
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:517063:-1
position: 517063
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:516504-516604:-1:exon

position:516504:-1
position: 516504
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:516604:-1
position: 516604
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:515529-515586:-1:exon

position:515529:-1
position: 515529
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:515586:-1
position: 515586
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:515131-515214:-1:exon

position:515131:-1
position: 515131
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:515214:-1
position: 515214
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:514492-514624:-1:exon

position:514492:-1
position: 514492
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:514624:-1
position: 514624
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:513983-514082:-1:exon

position:513983:-1
position: 513983
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:514082:-1
position: 514082
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:511199-513167:-1:exon

position:513167:-1
position: 513167
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

TMEM259
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8839
gene: TMEM259
product: transmembrane protein 259, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 126 samples with support for all annotated introns
transcript id: XM_027472526.2
SIO_010081: TMEM259
subclass of: SO_0000673
so part of: TMEM259
location: complement(join(511199..513167,513983..514082,514492..514624,515131..515214,515529..515586,516504..516604,516941..517063,518421..518531,520570..520738,521050..521316,524517..525041))
location: region:511199-525041:-1
so has part: feature:524517-525041:-1:exon
so has part: feature:521050-521316:-1:exon
so has part: feature:520570-520738:-1:exon
so has part: feature:518421-518531:-1:exon
so has part: feature:516941-517063:-1:exon
so has part: feature:516504-516604:-1:exon
so has part: feature:515529-515586:-1:exon
so has part: feature:515131-515214:-1:exon
so has part: feature:514492-514624:-1:exon
so has part: feature:513983-514082:-1:exon
so has part: feature:511199-513167:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:524517-525041:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:521050-521316:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:520570-520738:-1:exon

position:520570:-1
position: 520570
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:518421-518531:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:516941-517063:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:516504-516604:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:515529-515586:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:515131-515214:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:514492-514624:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:513983-514082:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:511199-513167:-1:exon

TMEM259
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8839
gene: TMEM259
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: membralin isoform X2
translation: MSENNPPHAAHQHPATHGGAAGGNGRGVRNPTGNQNPLINVRDRLFHALFFKMAVTYARLFPPAFRRVFEFFVLLKALFVLFILAYIHIAFSRSPINCLEHVRDKWPRDGILRVEIQRNSSRAAIYLQFCGAEKFPGMVAEPAAEEEEEEEEEMTVDMFENSSIKFELDIEPKVFLKPSRMSSTEALSRNESQEFSFSEAATKVWPQEEYIVEYSLEYGFLRLSQSTRQRLSIPVMVVTLDPTRDQCFGDRFSRLLLDEFLGYDDILMSSVKALAENEENKGFLRNVVSGEHYRFVSMWMARTSYLAAFVIMVIFTLSVSMLLRYSHHQIFVFIVDLLQMLEMNMTIAFPAAPLLTVILALVGMEAIMSEFFNDTTTAFYIILIVWLADQYDAICCHTNTSKRHWLRFFYLYHFAFYAYHYRFNGQYSSLALVTSWLFIQHSMIYFFHHYELPAILQQIRIQEMLLQNQQVGQGTQTTLQDNLNNNTTAAPIEVGSRRPHLAAGPAGESSGPAALTPSEASSVIAAATAGSDLNWVAETAAIVTEASFLSDLSSTLLEPNVVHEAMANGSPQDAAASSLVARIRVSSDHPETAVGSITIEVTSTAVVAAADVPPAAEVAPAAPPGPAQEDGASVPSPSPAEQTEAARGSDSRANPSSKNCAADGGVAEPPPAPGENTDQDKRSGRALGDRGESGPCPAPADSTASSGPCSEPDSRSLS
SIO_010081: TMEM259
subclass of: SO_0000673
so part of: TMEM259
location: complement(join(512331..513167,513983..514082,514492..514624,515131..515214,515529..515586,516504..516604,516941..517063,518421..518531,520624..520738,521050..521316,524517..524744))
location: region:512331-524744:-1
so has part: feature:524517-524744:-1:exon
so has part: feature:521050-521316:-1:exon
so has part: feature:520624-520738:-1:exon
so has part: feature:518421-518531:-1:exon
so has part: feature:516941-517063:-1:exon
so has part: feature:516504-516604:-1:exon
so has part: feature:515529-515586:-1:exon
so has part: feature:515131-515214:-1:exon
so has part: feature:514492-514624:-1:exon
so has part: feature:513983-514082:-1:exon
so has part: feature:512331-513167:-1:exon

XP_027328328.1
type: Protein
SIO_000068: ncbiprotein

position:512331:-1
position: 512331
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:524744:-1
position: 524744
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:524517-524744:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:521050-521316:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:520624-520738:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:518421-518531:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:516941-517063:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:516504-516604:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:515529-515586:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:515131-515214:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:514492-514624:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:513983-514082:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:512331-513167:-1:exon

TMEM259
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8839
gene: TMEM259
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: membralin isoform X1
translation: MSENNPPHAAHQHPATHGGAAGGNGRGVRNPTGNQNPLINVRDRLFHALFFKMAVTYARLFPPAFRRVFEFFVLLKALFVLFILAYIHIAFSRSPINCLEHVRDKWPRDGILRVEIQRNSSRAAIYLQFCGAEKFPGMVAEPAAEEEEEEEEEMTVDMFENSSIKFELDIEPKVFLKPSRMSSTEALSRNESQEFSFSEAATKGMQPLRETVSEFEMLTRAVWPQEEYIVEYSLEYGFLRLSQSTRQRLSIPVMVVTLDPTRDQCFGDRFSRLLLDEFLGYDDILMSSVKALAENEENKGFLRNVVSGEHYRFVSMWMARTSYLAAFVIMVIFTLSVSMLLRYSHHQIFVFIVDLLQMLEMNMTIAFPAAPLLTVILALVGMEAIMSEFFNDTTTAFYIILIVWLADQYDAICCHTNTSKRHWLRFFYLYHFAFYAYHYRFNGQYSSLALVTSWLFIQHSMIYFFHHYELPAILQQIRIQEMLLQNQQVGQGTQTTLQDNLNNNTTAAPIEVGSRRPHLAAGPAGESSGPAALTPSEASSVIAAATAGSDLNWVAETAAIVTEASFLSDLSSTLLEPNVVHEAMANGSPQDAAASSLVARIRVSSDHPETAVGSITIEVTSTAVVAAADVPPAAEVAPAAPPGPAQEDGASVPSPSPAEQTEAARGSDSRANPSSKNCAADGGVAEPPPAPGENTDQDKRSGRALGDRGESGPCPAPADSTASSGPCSEPDSRSLS
SIO_010081: TMEM259
subclass of: SO_0000673
so part of: TMEM259
location: complement(join(512331..513167,513983..514082,514492..514624,515131..515214,515529..515586,516504..516604,516941..517063,518421..518531,520570..520738,521050..521316,524517..524744))
location: region:512331-524744:-1
so has part: feature:524517-524744:-1:exon
so has part: feature:521050-521316:-1:exon
so has part: feature:520570-520738:-1:exon
so has part: feature:518421-518531:-1:exon
so has part: feature:516941-517063:-1:exon
so has part: feature:516504-516604:-1:exon
so has part: feature:515529-515586:-1:exon
so has part: feature:515131-515214:-1:exon
so has part: feature:514492-514624:-1:exon
so has part: feature:513983-514082:-1:exon
so has part: feature:512331-513167:-1:exon

XP_027328327.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:524517-524744:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:521050-521316:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:520570-520738:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:518421-518531:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:516941-517063:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:516504-516604:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:515529-515586:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:515131-515214:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:514492-514624:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:513983-514082:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:512331-513167:-1:exon

LOC113845706
type: Gene
subclass of: SO_0000704
RO_0002162: 8839
gene: LOC113845706
note: Derived by automated computational analysis using gene prediction method: cmsearch.
so part of: sequence
location: 525369..525475
location: region:525369-525475:1
so has part: feature:525369-525475:1:exon
subclass of: SO_0000623

113845706
type: Gene
SIO_000068: ncbigene

position:525369:1
position: 525369
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:525475:1
position: 525475
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:525369-525475:1:exon

LOC113845706
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 8839
nc RNA class: snRNA
gene: LOC113845706
product: U6 spliceosomal RNA
inference: COORDINATES: nucleotide motif:Rfam:12.0:RF00026
inference: COORDINATES: profile:INFERNAL:1.1.1
note: Derived by automated computational analysis using gene prediction method: cmsearch.
transcript id: XR_003501437.1
SIO_010081: LOC113845706
subclass of: SO_0000673
so part of: LOC113845706
location: 525369..525475
location: region:525369-525475:1
so has part: feature:525369-525475:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:525369-525475:1:exon

ABCA7
type: Gene
subclass of: SO_0000704
RO_0002162: 8839
gene: ABCA7
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(525569..538513)
location: region:525569-538513:-1
so has part: feature:525569-538513:-1:exon
subclass of: SO_0000010

113845670
type: Gene
SIO_000068: ncbigene

position:525569:-1
position: 525569
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:538513:-1
position: 538513
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:525569-538513:-1:exon

ABCA7
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8839
gene: ABCA7
product: ATP binding cassette subfamily A member 7
exception: unclassified transcription discrepancy
note: The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: deleted 11 bases in 10 codons; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 7 Proteins, and 90% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_038169023.1
SIO_010081: ABCA7
subclass of: SO_0000673
so part of: ABCA7
location: complement(join(525569..525888,525962..526205,526286..526378,526463..526566,526648..526782,526854..526995,527238..527344,527414..527476,527590..527710,527782..527911,528022..528145,528239..528383,528522..528637,528728..528905,528973..529143,529288..529362,529451..529556,529649..529681,529952..530046,530138..530333,530436..530534,530613..530737,530823..530974,531113..531130,531398..531478,531663..531711,531839..532041,532153..532225,532348..532547,532748..532885,532980..533119,533197..533328,533517..533689,533822..533939,534035..534239,534343..534564,534676..534898,534988..535165,535263..535473,535542..535722,535809..535925,535992..536131,536231..536457,536541..536621,536995..537246,537334..537476,537593..537686,537799..537874,538261..538513))
location: region:525569-538513:-1
so has part: feature:538261-538513:-1:exon
so has part: feature:537799-537874:-1:exon
so has part: feature:537593-537686:-1:exon
so has part: feature:537334-537476:-1:exon
so has part: feature:536995-537246:-1:exon
so has part: feature:536541-536621:-1:exon
so has part: feature:536231-536457:-1:exon
so has part: feature:535992-536131:-1:exon
so has part: feature:535809-535925:-1:exon
so has part: feature:535542-535722:-1:exon
so has part: feature:535263-535473:-1:exon
so has part: feature:534988-535165:-1:exon
so has part: feature:534676-534898:-1:exon
so has part: feature:534343-534564:-1:exon
so has part: feature:534035-534239:-1:exon
so has part: feature:533822-533939:-1:exon
so has part: feature:533517-533689:-1:exon
so has part: feature:533197-533328:-1:exon
so has part: feature:532980-533119:-1:exon
so has part: feature:532748-532885:-1:exon
so has part: feature:532348-532547:-1:exon
so has part: feature:532153-532225:-1:exon
so has part: feature:531839-532041:-1:exon
so has part: feature:531663-531711:-1:exon
so has part: feature:531398-531478:-1:exon
so has part: feature:531113-531130:-1:exon
so has part: feature:530823-530974:-1:exon
so has part: feature:530613-530737:-1:exon
so has part: feature:530436-530534:-1:exon
so has part: feature:530138-530333:-1:exon
so has part: feature:529952-530046:-1:exon
so has part: feature:529649-529681:-1:exon
so has part: feature:529451-529556:-1:exon
so has part: feature:529288-529362:-1:exon
so has part: feature:528973-529143:-1:exon
so has part: feature:528728-528905:-1:exon
so has part: feature:528522-528637:-1:exon
so has part: feature:528239-528383:-1:exon
so has part: feature:528022-528145:-1:exon
so has part: feature:527782-527911:-1:exon
so has part: feature:527590-527710:-1:exon
so has part: feature:527414-527476:-1:exon
so has part: feature:527238-527344:-1:exon
so has part: feature:526854-526995:-1:exon
so has part: feature:526648-526782:-1:exon
so has part: feature:526463-526566:-1:exon
so has part: feature:526286-526378:-1:exon
so has part: feature:525962-526205:-1:exon
so has part: feature:525569-525888:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:538261-538513:-1:exon

position:538261:-1
position: 538261
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:537799-537874:-1:exon

position:537799:-1
position: 537799
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:537874:-1
position: 537874
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:537593-537686:-1:exon

position:537593:-1
position: 537593
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:537686:-1
position: 537686
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:537334-537476:-1:exon

position:537334:-1
position: 537334
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:537476:-1
position: 537476
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:536995-537246:-1:exon

position:536995:-1
position: 536995
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:537246:-1
position: 537246
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:536541-536621:-1:exon

position:536541:-1
position: 536541
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:536621:-1
position: 536621
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:536231-536457:-1:exon

position:536231:-1
position: 536231
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:536457:-1
position: 536457
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:535992-536131:-1:exon

position:535992:-1
position: 535992
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:536131:-1
position: 536131
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:535809-535925:-1:exon

position:535809:-1
position: 535809
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:535925:-1
position: 535925
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:535542-535722:-1:exon

position:535542:-1
position: 535542
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:535722:-1
position: 535722
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:535263-535473:-1:exon

position:535263:-1
position: 535263
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:535473:-1
position: 535473
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:534988-535165:-1:exon

position:534988:-1
position: 534988
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:535165:-1
position: 535165
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:534676-534898:-1:exon

position:534676:-1
position: 534676
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:534898:-1
position: 534898
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:534343-534564:-1:exon

position:534343:-1
position: 534343
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:534564:-1
position: 534564
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:534035-534239:-1:exon

position:534035:-1
position: 534035
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:534239:-1
position: 534239
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:533822-533939:-1:exon

position:533822:-1
position: 533822
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:533939:-1
position: 533939
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:533517-533689:-1:exon

position:533517:-1
position: 533517
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:533689:-1
position: 533689
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:533197-533328:-1:exon

position:533197:-1
position: 533197
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:533328:-1
position: 533328
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:532980-533119:-1:exon

position:532980:-1
position: 532980
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:533119:-1
position: 533119
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:532748-532885:-1:exon

position:532748:-1
position: 532748
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:532885:-1
position: 532885
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:532348-532547:-1:exon

position:532348:-1
position: 532348
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:532547:-1
position: 532547
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 22
SIO_000628: feature:532153-532225:-1:exon

position:532153:-1
position: 532153
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:532225:-1
position: 532225
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 23
SIO_000628: feature:531839-532041:-1:exon

position:531839:-1
position: 531839
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:532041:-1
position: 532041
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 24
SIO_000628: feature:531663-531711:-1:exon

position:531663:-1
position: 531663
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:531711:-1
position: 531711
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 25
SIO_000628: feature:531398-531478:-1:exon

position:531398:-1
position: 531398
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:531478:-1
position: 531478
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 26
SIO_000628: feature:531113-531130:-1:exon

position:531113:-1
position: 531113
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:531130:-1
position: 531130
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 27
SIO_000628: feature:530823-530974:-1:exon

position:530823:-1
position: 530823
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:530974:-1
position: 530974
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 28
SIO_000628: feature:530613-530737:-1:exon

position:530613:-1
position: 530613
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:530737:-1
position: 530737
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 29
SIO_000628: feature:530436-530534:-1:exon

position:530436:-1
position: 530436
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:530534:-1
position: 530534
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 30
SIO_000628: feature:530138-530333:-1:exon

position:530138:-1
position: 530138
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:530333:-1
position: 530333
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 31
SIO_000628: feature:529952-530046:-1:exon

position:529952:-1
position: 529952
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:530046:-1
position: 530046
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 32
SIO_000628: feature:529649-529681:-1:exon

position:529649:-1
position: 529649
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:529681:-1
position: 529681
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 33
SIO_000628: feature:529451-529556:-1:exon

position:529451:-1
position: 529451
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:529556:-1
position: 529556
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 34
SIO_000628: feature:529288-529362:-1:exon

position:529288:-1
position: 529288
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:529362:-1
position: 529362
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 35
SIO_000628: feature:528973-529143:-1:exon

position:528973:-1
position: 528973
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:529143:-1
position: 529143
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 36
SIO_000628: feature:528728-528905:-1:exon

position:528728:-1
position: 528728
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:528905:-1
position: 528905
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 37
SIO_000628: feature:528522-528637:-1:exon

position:528522:-1
position: 528522
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:528637:-1
position: 528637
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 38
SIO_000628: feature:528239-528383:-1:exon

position:528239:-1
position: 528239
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:528383:-1
position: 528383
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 39
SIO_000628: feature:528022-528145:-1:exon

position:528022:-1
position: 528022
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:528145:-1
position: 528145
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 40
SIO_000628: feature:527782-527911:-1:exon

position:527782:-1
position: 527782
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:527911:-1
position: 527911
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 41
SIO_000628: feature:527590-527710:-1:exon

position:527590:-1
position: 527590
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:527710:-1
position: 527710
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 42
SIO_000628: feature:527414-527476:-1:exon

position:527414:-1
position: 527414
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:527476:-1
position: 527476
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 43
SIO_000628: feature:527238-527344:-1:exon

position:527238:-1
position: 527238
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:527344:-1
position: 527344
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 44
SIO_000628: feature:526854-526995:-1:exon

position:526854:-1
position: 526854
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:526995:-1
position: 526995
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 45
SIO_000628: feature:526648-526782:-1:exon

position:526648:-1
position: 526648
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:526782:-1
position: 526782
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 46
SIO_000628: feature:526463-526566:-1:exon

position:526463:-1
position: 526463
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:526566:-1
position: 526566
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 47
SIO_000628: feature:526286-526378:-1:exon

position:526286:-1
position: 526286
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:526378:-1
position: 526378
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 48
SIO_000628: feature:525962-526205:-1:exon

position:525962:-1
position: 525962
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:526205:-1
position: 526205
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 49
SIO_000628: feature:525569-525888:-1:exon

position:525888:-1
position: 525888
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

ABCA7
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8839
gene: ABCA7
exception: unclassified translation discrepancy
note: The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: deleted 11 bases in 10 codons; Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: LOW QUALITY PROTEIN: phospholipid-transporting ATPase ABCA7
translation: MAVGTQLGLLLWKNLVHRRRQRVQLAIELLWPLFLFVILIAVRQSHPPFQQHQCHFPNKALPSAGTLPWLQGIICNVNNPCFQHPTPGETPGVVGNFNGSILSRLLAEARGVALHAEGQQLPQRLAQLLPALRGLGALSTAPPTWPLRDLLREDETLERFLRTNASLPPALVEELLGARLNPRAERLSSEADGAVGALGPFLRGAESLLREVSSMGSVAELRHEVRALRGNGTLGAFGALSRIACGHPEGGGLRVPSLNWYEDNDVKAFLDRGGSERGTGTPDNGSSPFCRELIRSLEASPLSQLFWRGIKPLFVGKILYTPPGPATDSIMAEVNRTFQELAALRDAAGAWQELGPQIRAFLNSSLELQVLRELLLAPGTAPLLEGILNGTSWTASALTRFLAGPAEGPGLSWQQALDEADGVVGTLSQLLECVRVDKIEAVATEEQAGGAALELLEERQFWAAVVFQPPLSASATALPPHVRYKIRMDIDDVTRTNKIKDRFWDPGPAADPFSDLRYVWGGFVYVQDLVEQAVVRLQSGAAPRTGVYVQQMPYPCYVDDVFLRVLNRSLPLFMTLAWIYSVAMIIKGVVHEKEARLKETMKAMGLSSGILWLSWFLSSFIPFLLSSALLVLILKLGNILPYSDPAVIFLFLGTFSVATICQCFLISTFFLRANLASACGGIVYFSLYLPYVLCVAWRDHVTFPLRVLVSLLSPVAFGFGCEYFSLYEEQGVGIQWHNLAVSPVPGDPYSFATAMGLLLLDAGLYGLATWYIEGVFPGQYGVPKPWNFPFLKSYWFGEPPSAGHPPFPTDPLTAPQVLVEEPPAQLQPGVSIRNLVKIYSSSNRVAVNGLSLDFYEGQITSFLGHNGAGKTTTMSILTGLLPPTSGTAYVLGWDIRCDIDSIRKTLGMCPQHNVLFDIMTVEEHIWFYGRLKGLAEEQVKAEMEQLLQDTGLPHKRHEQTRNLSGGMQRKLSVAIAFVGGSRVVVLDEPTAGVDPYSRRSIWELLLKYRKGRTIVLSTHYMDEAELLGDRIAIIAQGRLRCCGSPLFLKARLGTGYYLTLVKRERAEPGSTPSPPKKSSSGSERSGDTGLGSEQDSEASTVDVPQLSALIQKLVLGSRLVEDVGHEVLFVLPYSGAKDGAFGELFQELDARLGELGISGYGISDTTLEEIFLKVAEDTGVDGDRTGTRRTSQPGRAAGTGEEGDSGAADGELAQGARRAEEPQETDLLHGTAEGGRRLRGWALTRQQLRALFTKRLLHARRSTRGFFAQIVLPAVFVCIALLFSLIVPPFGKYPPLRLEPWMYGQQFTFFSDDAPGDPDTARLLGALLAEPGFGTKCMKEAAEATGPCPPASHPDGFWQPPAPPAVLEVLQHGNWTRAEPSPPCQCSGPGARRMLPECPPAAGGLPPPQVQRGTGDILLNLTGRNISDYLVKTYPQLIRQGLKTKKWVNEQRYGGFSLGAGSSQLLPSAEEVDRAVQELRALFNITQGSPADRLLGNLSRFFEGLDARRNIKVWFNNKGWHAVVSFLNVASNALLRARLPAGTDPALYGITATNHPLNLTKEQLSEAALMATSVDVLVSICVIFAMSFVPASFVLFLIEERVSKAKHLQFVSGMKPLTYWLGNFAWDMCNYLVPALLVVLIFLCFQQKAYVSPANLPSLVLLLLLYGWSITPLMYPASFLFSIPSTAYVALTCINLFIGINGSVATFVLELFVDQKLNDINRVLKKVFLVFPHFCLGRGLIDMVKNQAMADAFERFGDKRFVSPLCWDLAGKNMFAMAVEGVVFFLFTLLLQYRFFLRLRPRALQLPPLGDEDQDVAQERVRVGSSPRHGAVLLLKDLTKVYRHRRAPAVDRLCLAIPAGECFGLLGVNGAGKTSTFKMLTGDTEVTLGEAWLKGHSVLTDLQSVHQNMGYCPQFDAITDLLTGREHLEFYSRLRGVPEEEIPRVAQWGIAKLGLEPHADRPAGKYSGGNKRKLSTAIALIGCPPVIFLDEPTTGMDPGA…
SIO_010081: ABCA7
subclass of: SO_0000673
so part of: ABCA7
location: complement(join(525748..525888,525962..526205,526286..526378,526463..526566,526648..526782,526854..526995,527238..527344,527414..527476,527590..527710,527782..527911,528022..528145,528239..528383,528522..528637,528728..528905,528973..529143,529288..529362,529451..529556,529649..529681,529952..530046,530138..530333,530436..530534,530613..530737,530823..530974,531113..531130,531398..531478,531663..531711,531839..532041,532153..532225,532348..532547,532748..532885,532980..533119,533197..533328,533517..533689,533822..533939,534035..534239,534343..534564,534676..534898,534988..535165,535263..535473,535542..535722,535809..535925,535992..536131,536231..536457,536541..536621,536995..537246,537334..537476,537593..537686,537799..537864))
location: region:525748-537864:-1
so has part: feature:537799-537864:-1:exon
so has part: feature:537593-537686:-1:exon
so has part: feature:537334-537476:-1:exon
so has part: feature:536995-537246:-1:exon
so has part: feature:536541-536621:-1:exon
so has part: feature:536231-536457:-1:exon
so has part: feature:535992-536131:-1:exon
so has part: feature:535809-535925:-1:exon
so has part: feature:535542-535722:-1:exon
so has part: feature:535263-535473:-1:exon
so has part: feature:534988-535165:-1:exon
so has part: feature:534676-534898:-1:exon
so has part: feature:534343-534564:-1:exon
so has part: feature:534035-534239:-1:exon
so has part: feature:533822-533939:-1:exon
so has part: feature:533517-533689:-1:exon
so has part: feature:533197-533328:-1:exon
so has part: feature:532980-533119:-1:exon
so has part: feature:532748-532885:-1:exon
so has part: feature:532348-532547:-1:exon
so has part: feature:532153-532225:-1:exon
so has part: feature:531839-532041:-1:exon
so has part: feature:531663-531711:-1:exon
so has part: feature:531398-531478:-1:exon
so has part: feature:531113-531130:-1:exon
so has part: feature:530823-530974:-1:exon
so has part: feature:530613-530737:-1:exon
so has part: feature:530436-530534:-1:exon
so has part: feature:530138-530333:-1:exon
so has part: feature:529952-530046:-1:exon
so has part: feature:529649-529681:-1:exon
so has part: feature:529451-529556:-1:exon
so has part: feature:529288-529362:-1:exon
so has part: feature:528973-529143:-1:exon
so has part: feature:528728-528905:-1:exon
so has part: feature:528522-528637:-1:exon
so has part: feature:528239-528383:-1:exon
so has part: feature:528022-528145:-1:exon
so has part: feature:527782-527911:-1:exon
so has part: feature:527590-527710:-1:exon
so has part: feature:527414-527476:-1:exon
so has part: feature:527238-527344:-1:exon
so has part: feature:526854-526995:-1:exon
so has part: feature:526648-526782:-1:exon
so has part: feature:526463-526566:-1:exon
so has part: feature:526286-526378:-1:exon
so has part: feature:525962-526205:-1:exon
so has part: feature:525748-525888:-1:exon

XP_038024951.1
type: Protein
SIO_000068: ncbiprotein

position:525748:-1
position: 525748
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:537864:-1
position: 537864
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:537799-537864:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:537593-537686:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:537334-537476:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:536995-537246:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:536541-536621:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:536231-536457:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:535992-536131:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:535809-535925:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:535542-535722:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:535263-535473:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:534988-535165:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:534676-534898:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:534343-534564:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:534035-534239:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:533822-533939:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:533517-533689:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:533197-533328:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:532980-533119:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:532748-532885:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:532348-532547:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:532153-532225:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:531839-532041:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:531663-531711:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:531398-531478:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:531113-531130:-1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:530823-530974:-1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:530613-530737:-1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:530436-530534:-1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:530138-530333:-1:exon

urn:…
SIO_000300: 30
SIO_000628: feature:529952-530046:-1:exon

urn:…
SIO_000300: 31
SIO_000628: feature:529649-529681:-1:exon

urn:…
SIO_000300: 32
SIO_000628: feature:529451-529556:-1:exon

urn:…
SIO_000300: 33
SIO_000628: feature:529288-529362:-1:exon

urn:…
SIO_000300: 34
SIO_000628: feature:528973-529143:-1:exon

urn:…
SIO_000300: 35
SIO_000628: feature:528728-528905:-1:exon

urn:…
SIO_000300: 36
SIO_000628: feature:528522-528637:-1:exon

urn:…
SIO_000300: 37
SIO_000628: feature:528239-528383:-1:exon

urn:…
SIO_000300: 38
SIO_000628: feature:528022-528145:-1:exon

urn:…
SIO_000300: 39
SIO_000628: feature:527782-527911:-1:exon

urn:…
SIO_000300: 40
SIO_000628: feature:527590-527710:-1:exon

urn:…
SIO_000300: 41
SIO_000628: feature:527414-527476:-1:exon

urn:…
SIO_000300: 42
SIO_000628: feature:527238-527344:-1:exon

urn:…
SIO_000300: 43
SIO_000628: feature:526854-526995:-1:exon

urn:…
SIO_000300: 44
SIO_000628: feature:526648-526782:-1:exon

urn:…
SIO_000300: 45
SIO_000628: feature:526463-526566:-1:exon

urn:…
SIO_000300: 46
SIO_000628: feature:526286-526378:-1:exon

urn:…
SIO_000300: 47
SIO_000628: feature:525962-526205:-1:exon

urn:…
SIO_000300: 48
SIO_000628: feature:525748-525888:-1:exon

CNN2
type: Gene
subclass of: SO_0000704
RO_0002162: 8839
gene: CNN2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(538827..543843)
location: region:538827-543843:-1
so has part: feature:538827-543843:-1:exon
subclass of: SO_0000010

113845671
type: Gene
SIO_000068: ncbigene

position:538827:-1
position: 538827
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:543843:-1
position: 543843
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:538827-543843:-1:exon

CNN2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8839
gene: CNN2
product: calponin 2
exception: unclassified transcription discrepancy
note: The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: deleted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 10 Proteins, and 98% coverage of the annotated genomic feature by RNAseq alignments, including 126 samples with support for all annotated introns
transcript id: XM_027472534.2
SIO_010081: CNN2
subclass of: SO_0000673
so part of: CNN2
location: complement(join(538827..539650,539738..539884,540043..540159,540272..540410,540496..540562,540835..540956,543685..543843))
location: region:538827-543843:-1
so has part: feature:543685-543843:-1:exon
so has part: feature:540835-540956:-1:exon
so has part: feature:540496-540562:-1:exon
so has part: feature:540272-540410:-1:exon
so has part: feature:540043-540159:-1:exon
so has part: feature:539738-539884:-1:exon
so has part: feature:538827-539650:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:543685-543843:-1:exon

position:543685:-1
position: 543685
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:540835-540956:-1:exon

position:540835:-1
position: 540835
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:540956:-1
position: 540956
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:540496-540562:-1:exon

position:540496:-1
position: 540496
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:540562:-1
position: 540562
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:540272-540410:-1:exon

position:540272:-1
position: 540272
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:540410:-1
position: 540410
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:540043-540159:-1:exon

position:540043:-1
position: 540043
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:540159:-1
position: 540159
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:539738-539884:-1:exon

position:539738:-1
position: 539738
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:539884:-1
position: 539884
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:538827-539650:-1:exon

position:539650:-1
position: 539650
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

CNN2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8839
gene: CNN2
exception: unclassified translation discrepancy
note: The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: deleted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: LOW QUALITY PROTEIN: calponin-2
translation: MSSSQFNKGPSYGLSAEVKNRLAQKYDPQKEAELRTWIESVTGQQIGPDFQKGLKDGVILCELMNKLQPNAVRKINRSAQNWHQLENLSNFIKAMASYGMNPVDLFEANDLFESGNLTQVQVSLLALAGMAKTKGMQSGVDIGVKYSEKQQRNFDEAKMKAGQCVIGLQMGTNKCASQSGMTAYGTRRHLYDPKNQILPPMDHSTISLQMGTNKCASQVGMTAPGTRRHIYDAKMGLEKCDNSSMSLQMGSNQGANQSGQVFGLGRQIYDPKYCPQGTQPEGGDAACEPGADPPGYHYYRQEESC
SIO_010081: CNN2
subclass of: SO_0000673
so part of: CNN2
location: complement(join(539387..539650,539738..539884,540043..540159,540272..540410,540496..540562,540835..540956,543685..543747))
location: region:539387-543747:-1
so has part: feature:543685-543747:-1:exon
so has part: feature:540835-540956:-1:exon
so has part: feature:540496-540562:-1:exon
so has part: feature:540272-540410:-1:exon
so has part: feature:540043-540159:-1:exon
so has part: feature:539738-539884:-1:exon
so has part: feature:539387-539650:-1:exon

XP_027328335.1
type: Protein
SIO_000068: ncbiprotein

position:539387:-1
position: 539387
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:543747:-1
position: 543747
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:543685-543747:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:540835-540956:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:540496-540562:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:540272-540410:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:540043-540159:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:539738-539884:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:539387-539650:-1:exon

ARHGAP45
type: Gene
subclass of: SO_0000704
RO_0002162: 8839
gene: ARHGAP45
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 544550..562333
location: region:544550-562333:1
so has part: feature:544550-562333:1:exon
subclass of: SO_0000010

101796718
type: Gene
SIO_000068: ncbigene

position:544550:1
position: 544550
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:562333:1
position: 562333
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:544550-562333:1:exon

ARHGAP45
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8839
gene: ARHGAP45
product: Rho GTPase activating protein 45
exception: unclassified transcription discrepancy
note: The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: deleted 2 bases in 2 codons; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, 5 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments, including 95 samples with support for all annotated introns
transcript id: XM_027472520.2
SIO_010081: ARHGAP45
subclass of: SO_0000673
so part of: ARHGAP45
location: join(544550..545136,546968..547299,548917..549060,549925..550009,550355..550427,550698..550770,551493..551630,552080..552144,552265..552375,552811..552892,553334..553513,553691..553828,553989..554179,554284..554441,554847..554924,555306..555407,555762..555925,556462..556650,557023..557160,558217..558458,558603..558865,559104..559208,559637..562333)
location: region:544550-562333:1
so has part: feature:544550-545136:1:exon
so has part: feature:546968-547299:1:exon
so has part: feature:548917-549060:1:exon
so has part: feature:549925-550009:1:exon
so has part: feature:550355-550427:1:exon
so has part: feature:550698-550770:1:exon
so has part: feature:551493-551630:1:exon
so has part: feature:552080-552144:1:exon
so has part: feature:552265-552375:1:exon
so has part: feature:552811-552892:1:exon
so has part: feature:553334-553513:1:exon
so has part: feature:553691-553828:1:exon
so has part: feature:553989-554179:1:exon
so has part: feature:554284-554441:1:exon
so has part: feature:554847-554924:1:exon
so has part: feature:555306-555407:1:exon
so has part: feature:555762-555925:1:exon
so has part: feature:556462-556650:1:exon
so has part: feature:557023-557160:1:exon
so has part: feature:558217-558458:1:exon
so has part: feature:558603-558865:1:exon
so has part: feature:559104-559208:1:exon
so has part: feature:559637-562333:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:544550-545136:1:exon

position:545136:1
position: 545136
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:546968-547299:1:exon

position:546968:1
position: 546968
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:547299:1
position: 547299
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:548917-549060:1:exon

position:548917:1
position: 548917
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:549060:1
position: 549060
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:549925-550009:1:exon

position:549925:1
position: 549925
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:550009:1
position: 550009
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:550355-550427:1:exon

position:550355:1
position: 550355
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:550427:1
position: 550427
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:550698-550770:1:exon

position:550698:1
position: 550698
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:550770:1
position: 550770
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:551493-551630:1:exon

position:551493:1
position: 551493
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:551630:1
position: 551630
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:552080-552144:1:exon

position:552080:1
position: 552080
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:552144:1
position: 552144
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:552265-552375:1:exon

position:552265:1
position: 552265
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:552375:1
position: 552375
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:552811-552892:1:exon

position:552811:1
position: 552811
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:552892:1
position: 552892
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:553334-553513:1:exon

position:553334:1
position: 553334
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:553513:1
position: 553513
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:553691-553828:1:exon

position:553691:1
position: 553691
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:553828:1
position: 553828
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:553989-554179:1:exon

position:553989:1
position: 553989
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:554179:1
position: 554179
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:554284-554441:1:exon

position:554284:1
position: 554284
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:554441:1
position: 554441
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:554847-554924:1:exon

position:554847:1
position: 554847
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:554924:1
position: 554924
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:555306-555407:1:exon

position:555306:1
position: 555306
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:555407:1
position: 555407
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:555762-555925:1:exon

position:555762:1
position: 555762
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:555925:1
position: 555925
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:556462-556650:1:exon

position:556462:1
position: 556462
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:556650:1
position: 556650
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:557023-557160:1:exon

position:557023:1
position: 557023
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:557160:1
position: 557160
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:558217-558458:1:exon

position:558217:1
position: 558217
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:558458:1
position: 558458
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:558603-558865:1:exon

position:558603:1
position: 558603
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:558865:1
position: 558865
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 22
SIO_000628: feature:559104-559208:1:exon

position:559104:1
position: 559104
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:559208:1
position: 559208
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 23
SIO_000628: feature:559637-562333:1:exon

position:559637:1
position: 559637
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

ARHGAP45
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8839
gene: ARHGAP45
exception: unclassified translation discrepancy
note: The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: deleted 2 bases in 2 codons; Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: LOW QUALITY PROTEIN: rho GTPase-activating protein 45
translation: MFSRKKRELMKTPSISKKSRAGSPIPQTLPDLSRKDCLEAPGSSLGDLPPTSSKLSSSPSAVGTLKRPTSLSRHASAAGFPLTAGAPRAMPKGHKTPTSYSPMEGGEGLFIDVEDISQLLTDVARFADALENLRDVVLRDDPKESQRPQAHECLGEALRVLRQVINKYPLLNTLETLTAAGTLISKVKGFHYESNNETDKREFEKAVETIAVSFSSTVSEFLMGEVDSSTILSIPPSDQNQSMESLYSGISGGVVMPAGTESYDTVRPAAEEVDVMLQRCEGGVDAALQYAKNISKYMKDLIGYLEKRTTLEMEFAKGLQKMANSCKQTITQETSMPFLSIYLLALEQDMEYGTSVLQTVNTLQHQTFLQPLTVRRLEHEKRRKEIKEQWHRAQRKLQDAEVNLRKAKQIYMQRSEEHDKAKYMAAKAEEEQQSTTSGITTKALDKKRRLEEEAKNKAEEAMATYRTCIADANTQKQELEDTKVNSLRQIHELIKQSDQVIKLATIAFYQIMHMQTAPLPVYFQTLCESSKLYDPGQQYASHVKQLQRGDEPDTQYDFEPYVSHNAWSPFIRSRKGSFNANDFSTSSSPDGAGMPKDGAPSEGGAGAKEQQSGAGAERRGGRGHQVHKSWPTSTSETDSSLDSNTGEFSHKLQRLSSNGTMSSSEELEEKDENAASFEQSINGITPEMTAPTGPFRNVGLSKAAQTHRLRKLRAPSKCRECNSYVYFQGAECEECYLACHKKCLETLAIQCGHKKLQGKLQLFGQDFMKASQSSSDGIPFIIKKCISEIEKRALKTKGIYRVNGVKTRVEKLCQAFENGKELVELSQASPHDISNVLKLYLRQLPEPIMPFRMYNELMGLAKESLQGGSEAKGRSGKGGPELVDRGADTDKVVVTLVLKLKELLKELPWENMATLQYLLQHLRRIVEVEQDNKMTSSNLGIVFGPTLMRPRPTDATISLSSLVDYPHQARIIEALIIFYSTIFENKEAPLLA
SIO_010081: ARHGAP45
subclass of: SO_0000673
so part of: ARHGAP45
location: join(545047..545136,546968..547299,548917..549060,549925..550009,550355..550427,550698..550770,551493..551630,552080..552144,552265..552375,552811..552892,553334..553513,553691..553828,553989..554179,554284..554441,554847..554924,555306..555407,555762..555925,556462..556650,557023..557160,558217..558458,558603..558810)
location: region:545047-558810:1
so has part: feature:545047-545136:1:exon
so has part: feature:546968-547299:1:exon
so has part: feature:548917-549060:1:exon
so has part: feature:549925-550009:1:exon
so has part: feature:550355-550427:1:exon
so has part: feature:550698-550770:1:exon
so has part: feature:551493-551630:1:exon
so has part: feature:552080-552144:1:exon
so has part: feature:552265-552375:1:exon
so has part: feature:552811-552892:1:exon
so has part: feature:553334-553513:1:exon
so has part: feature:553691-553828:1:exon
so has part: feature:553989-554179:1:exon
so has part: feature:554284-554441:1:exon
so has part: feature:554847-554924:1:exon
so has part: feature:555306-555407:1:exon
so has part: feature:555762-555925:1:exon
so has part: feature:556462-556650:1:exon
so has part: feature:557023-557160:1:exon
so has part: feature:558217-558458:1:exon
so has part: feature:558603-558810:1:exon

XP_027328321.2
type: Protein
SIO_000068: ncbiprotein

position:545047:1
position: 545047
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:558810:1
position: 558810
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:545047-545136:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:546968-547299:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:548917-549060:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:549925-550009:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:550355-550427:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:550698-550770:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:551493-551630:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:552080-552144:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:552265-552375:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:552811-552892:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:553334-553513:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:553691-553828:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:553989-554179:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:554284-554441:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:554847-554924:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:555306-555407:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:555762-555925:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:556462-556650:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:557023-557160:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:558217-558458:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:558603-558810:1:exon

POLR2E
type: Gene
subclass of: SO_0000704
RO_0002162: 8839
gene: POLR2E
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(562770..565429)
location: region:562770-565429:-1
so has part: feature:562770-565429:-1:exon
subclass of: SO_0000010

113845648
type: Gene
SIO_000068: ncbigene

position:562770:-1
position: 562770
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:565429:-1
position: 565429
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:562770-565429:-1:exon

POLR2E
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8839
gene: POLR2E
product: RNA polymerase II, I and III subunit E
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, 18 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 126 samples with support for all annotated introns
transcript id: XM_038169021.1
SIO_010081: POLR2E
subclass of: SO_0000673
so part of: POLR2E
location: complement(join(562770..563063,563149..563229,563593..563671,563860..563918,564130..564210,564597..564712,564803..564977,565270..565429))
location: region:562770-565429:-1
so has part: feature:565270-565429:-1:exon
so has part: feature:564803-564977:-1:exon
so has part: feature:564597-564712:-1:exon
so has part: feature:564130-564210:-1:exon
so has part: feature:563860-563918:-1:exon
so has part: feature:563593-563671:-1:exon
so has part: feature:563149-563229:-1:exon
so has part: feature:562770-563063:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:565270-565429:-1:exon

position:565270:-1
position: 565270
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:564803-564977:-1:exon

position:564803:-1
position: 564803
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:564977:-1
position: 564977
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:564597-564712:-1:exon

position:564597:-1
position: 564597
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:564712:-1
position: 564712
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:564130-564210:-1:exon

position:564130:-1
position: 564130
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:564210:-1
position: 564210
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:563860-563918:-1:exon

position:563860:-1
position: 563860
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:563918:-1
position: 563918
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:563593-563671:-1:exon

position:563593:-1
position: 563593
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:563671:-1
position: 563671
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:563149-563229:-1:exon

position:563149:-1
position: 563149
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:563229:-1
position: 563229
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:562770-563063:-1:exon

position:563063:-1
position: 563063
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

POLR2E
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8839
gene: POLR2E
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: DNA-directed RNA polymerases I, II, and III subunit RPABC1
translation: MDDDEETYRLWKIRKTIMQLCHDRGYLVTQDELDQTLEEFKAQFGDTPSEGRPRRTDLTVLVAHNDDPTDQMFVFFPEEPKVGIKTIKMYCQRMQEENITRALIVVQQGMTPSAKQSLVDMAPKYILEQFLQQELLINITEHELVPEHVVMTKEEVTELLARYKLRENQLPRIQAGDPVARYFGIKRGQVVKIIRPSETAGRYITYRLVQ
SIO_010081: POLR2E
subclass of: SO_0000673
so part of: POLR2E
location: complement(join(563164..563229,563593..563671,563860..563918,564130..564210,564597..564712,564803..564977,565270..565326))
location: region:563164-565326:-1
so has part: feature:565270-565326:-1:exon
so has part: feature:564803-564977:-1:exon
so has part: feature:564597-564712:-1:exon
so has part: feature:564130-564210:-1:exon
so has part: feature:563860-563918:-1:exon
so has part: feature:563593-563671:-1:exon
so has part: feature:563164-563229:-1:exon

XP_038024949.1
type: Protein
SIO_000068: ncbiprotein

position:563164:-1
position: 563164
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:565326:-1
position: 565326
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:565270-565326:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:564803-564977:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:564597-564712:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:564130-564210:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:563860-563918:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:563593-563671:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:563164-563229:-1:exon

GPX4
type: Gene
subclass of: SO_0000704
RO_0002162: 8839
gene: GPX4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 565523..567300
location: region:565523-567300:1
so has part: feature:565523-567300:1:exon
subclass of: SO_0000010

101796330
type: Gene
SIO_000068: ncbigene

position:565523:1
position: 565523
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:567300:1
position: 567300
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:565523-567300:1:exon

GPX4
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8839
gene: GPX4
product: glutathione peroxidase 4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 10 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 126 samples with support for all annotated introns
transcript id: XM_038169022.1
SIO_010081: GPX4
subclass of: SO_0000673
so part of: GPX4
location: join(565523..565650,565788..565882,566010..566154,566282..566433,566544..566568,566814..566873,567019..567300)
location: region:565523-567300:1
so has part: feature:565523-565650:1:exon
so has part: feature:565788-565882:1:exon
so has part: feature:566010-566154:1:exon
so has part: feature:566282-566433:1:exon
so has part: feature:566544-566568:1:exon
so has part: feature:566814-566873:1:exon
so has part: feature:567019-567300:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:565523-565650:1:exon

position:565650:1
position: 565650
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:565788-565882:1:exon