Anas platyrhynchos isolate Z2 breed Pekin duck chromosome 28, ZJU1.0, whole genome shotgun sequence.
type: Entry
definition: Anas platyrhynchos isolate Z2 breed Pekin duck chromosome 28, ZJU1.0, whole genome shotgun sequence.
sequence version: NC_051799.1
sequence date: 2020-12-15
sequence: sequence
division: CON
label: NC_051799.1
type: RefSeq
SIO_000068: refseq
dblink: PRJNA681492
dblink: SAMN15588841
keyword: WGS
keyword: RefSeq
source: Anas platyrhynchos (mallard)
organism: Anas platyrhynchos
taxonomy: Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Galloanserae; Anseriformes; Anatidae; Anatinae; Anas.
comment: REFSEQ INFORMATION: The reference sequence is identical to\nCM027270.1.\nAssembly name: ZJU1.0\nThe genomic sequence for this RefSeq record is from the\nwhole-genome assembly released by the Zhejiang University on\n2020/11/23. The original whole-genome shotgun project has the\naccession JACGAL000000000.1.\n\n##Genome-Assembly-Data-START##\nAssembly Provider :: Zhejiang University\nAssembly Method :: FALCON-Unzip v. git 12072017\nAssembly Name :: ZJU1.0\nGenome Representation :: Full\nExpected Final Version :: No\nGenome Coverage :: 143.0x\nSequencing Technology :: PacBio RSII; PacBio Sequel\n##Genome-Assembly-Data-END##\n\n##Genome-Annotation-Data-START##\nAnnotation Provider :: NCBI\nAnnotation Status :: Full annotation\nAnnotation Name :: Anas platyrhynchos Annotation\n Release 104\nAnnotation Version :: 104\nAnnotation Pipeline :: NCBI eukaryotic genome annotation\n pipeline\nAnnotation Software Version :: 8.5\nAnnotation Method :: Best-placed RefSeq; Gnomon\nFeatures Annotated :: Gene; mRNA; CDS; ncRNA\n##Genome-Annotation-Data-END##

sequence
subclass of: SO_0000340
sequence length: 7028699
topology: linear
so has quality: SO_0000987
location: 1..7028699
location: region:1-7028699:1
RO_0002162: 8839

NC_051799
type: RefSeq
SIO_000068: refseq

PRJNA681492
type: BioProject
SIO_000068: bioproject

SAMN15588841
type: BioSample
SIO_000068: biosample

position:1:1
position: 1
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7028699:1
position: 7028699
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

feature:1-7028699:1:source
so part of: sequence
organism: Anas platyrhynchos
mol type: genomic DNA
isolate: Z2
chromosome: 28
sex: pooled male and female
tissue type: multiple
dev stage: adult
breed: Pekin duck

8839
type: Taxonomy
SIO_000068: taxonomy

PHB
type: Gene
subclass of: SO_0000704
RO_0002162: 8839
gene: PHB
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 5720..11119
location: region:5720-11119:1
so has part: feature:5720-11119:1:exon
subclass of: SO_0000010

101794699
type: Gene
SIO_000068: ncbigene

position:5720:1
position: 5720
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:11119:1
position: 11119
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5720-11119:1:exon

PHB
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8839
gene: PHB
product: prohibitin, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 14 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 126 samples with support for all annotated introns
transcript id: XM_005026138.5
SIO_010081: PHB
subclass of: SO_0000673
so part of: PHB
location: join(5720..5865,6390..6515,6922..7083,7598..7740,8524..8640,9651..9746,10748..11119)
location: region:5720-11119:1
so has part: feature:5720-5865:1:exon
so has part: feature:6390-6515:1:exon
so has part: feature:6922-7083:1:exon
so has part: feature:7598-7740:1:exon
so has part: feature:8524-8640:1:exon
so has part: feature:9651-9746:1:exon
so has part: feature:10748-11119:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:5720-5865:1:exon

position:5865:1
position: 5865
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:6390-6515:1:exon

position:6390:1
position: 6390
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6515:1
position: 6515
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:6922-7083:1:exon

position:6922:1
position: 6922
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7083:1
position: 7083
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:7598-7740:1:exon

position:7598:1
position: 7598
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7740:1
position: 7740
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:8524-8640:1:exon

position:8524:1
position: 8524
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:8640:1
position: 8640
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:9651-9746:1:exon

position:9651:1
position: 9651
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:9746:1
position: 9746
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:10748-11119:1:exon

position:10748:1
position: 10748
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

PHB
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8839
gene: PHB
product: prohibitin, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 14 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 126 samples with support for all annotated introns
transcript id: XM_027445585.2
SIO_010081: PHB
subclass of: SO_0000673
so part of: PHB
location: join(5872..6024,6390..6515,6922..7083,7598..7740,8524..8640,9651..9746,10748..11119)
location: region:5872-11119:1
so has part: feature:5872-6024:1:exon
so has part: feature:6390-6515:1:exon
so has part: feature:6922-7083:1:exon
so has part: feature:7598-7740:1:exon
so has part: feature:8524-8640:1:exon
so has part: feature:9651-9746:1:exon
so has part: feature:10748-11119:1:exon

position:5872:1
position: 5872
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5872-6024:1:exon

position:6024:1
position: 6024
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:6390-6515:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:6922-7083:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:7598-7740:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:8524-8640:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:9651-9746:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:10748-11119:1:exon

PHB
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8839
gene: PHB
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: prohibitin
translation: MAAKVFESLGKFGLGLAVAGGVVNSALYNVDAGHRAVIFDRFRGVQDTVVGEGTHFLIPWVQKPIIFDCRSRPRNIPVITGSKDLQNVNITLRILFRPVTAQLPRIFTSIGEDYDERVLPSITTEILKSVVARFDAGELITQRELVSRQVSEDLTERAATFGLILDDVSLTHLTFGKEFTEAVEMKQVAQQEAERARFIVEKAEQQKKAAVISAEGDSKAAELIANSLATAGDGLIELRKLEAAEDIAYQLSRSRNITYLPSGQSVLLQLPQ
SIO_010081: PHB
subclass of: SO_0000673
so part of: PHB
location: join(6428..6515,6922..7083,7598..7740,8524..8640,9651..9746,10748..10960)
location: region:6428-10960:1
so has part: feature:6428-6515:1:exon
so has part: feature:6922-7083:1:exon
so has part: feature:7598-7740:1:exon
so has part: feature:8524-8640:1:exon
so has part: feature:9651-9746:1:exon
so has part: feature:10748-10960:1:exon

XP_027301386.1
type: Protein
SIO_000068: ncbiprotein

position:6428:1
position: 6428
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:10960:1
position: 10960
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6428-6515:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:6922-7083:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:7598-7740:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:8524-8640:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:9651-9746:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:10748-10960:1:exon

PHB
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8839
gene: PHB
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: prohibitin
translation: MAAKVFESLGKFGLGLAVAGGVVNSALYNVDAGHRAVIFDRFRGVQDTVVGEGTHFLIPWVQKPIIFDCRSRPRNIPVITGSKDLQNVNITLRILFRPVTAQLPRIFTSIGEDYDERVLPSITTEILKSVVARFDAGELITQRELVSRQVSEDLTERAATFGLILDDVSLTHLTFGKEFTEAVEMKQVAQQEAERARFIVEKAEQQKKAAVISAEGDSKAAELIANSLATAGDGLIELRKLEAAEDIAYQLSRSRNITYLPSGQSVLLQLPQ
SIO_010081: PHB
subclass of: SO_0000673
so part of: PHB
location: join(6428..6515,6922..7083,7598..7740,8524..8640,9651..9746,10748..10960)
location: region:6428-10960:1
so has part: feature:6428-6515:1:exon
so has part: feature:6922-7083:1:exon
so has part: feature:7598-7740:1:exon
so has part: feature:8524-8640:1:exon
so has part: feature:9651-9746:1:exon
so has part: feature:10748-10960:1:exon

XP_005026195.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:6428-6515:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:6922-7083:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:7598-7740:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:8524-8640:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:9651-9746:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:10748-10960:1:exon

LOC110353902
type: Gene
subclass of: SO_0000704
RO_0002162: 8839
gene: LOC110353902
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(9713..10836)
location: region:9713-10836:-1
so has part: feature:9713-10836:-1:exon
subclass of: SO_0000011

110353902
type: Gene
SIO_000068: ncbigene

position:9713:-1
position: 9713
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:10836:-1
position: 10836
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:9713-10836:-1:exon

LOC110353902
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 8839
nc RNA class: lncRNA
gene: LOC110353902
product: uncharacterized LOC110353902
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 78 samples with support for all annotated introns
transcript id: XR_005261254.1
SIO_010081: LOC110353902
subclass of: SO_0000673
so part of: LOC110353902
location: complement(join(9713..10171,10695..10836))
location: region:9713-10836:-1
so has part: feature:10695-10836:-1:exon
so has part: feature:9713-10171:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:10695-10836:-1:exon

position:10695:-1
position: 10695
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:9713-10171:-1:exon

position:10171:-1
position: 10171
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC119714082
type: Gene
subclass of: SO_0000704
RO_0002162: 8839
gene: LOC119714082
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 11645..15160
location: region:11645-15160:1
so has part: feature:11645-15160:1:exon
subclass of: SO_0000011

119714082
type: Gene
SIO_000068: ncbigene

position:11645:1
position: 11645
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:15160:1
position: 15160
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:11645-15160:1:exon

LOC119714082
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 8839
nc RNA class: lncRNA
gene: LOC119714082
product: uncharacterized LOC119714082, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 19 samples with support for all annotated introns
transcript id: XR_005261253.1
SIO_010081: LOC119714082
subclass of: SO_0000673
so part of: LOC119714082
location: join(11645..12253,13225..13380,14665..15160)
location: region:11645-15160:1
so has part: feature:11645-12253:1:exon
so has part: feature:13225-13380:1:exon
so has part: feature:14665-15160:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:11645-12253:1:exon

position:12253:1
position: 12253
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:13225-13380:1:exon

position:13225:1
position: 13225
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:13380:1
position: 13380
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:14665-15160:1:exon

position:14665:1
position: 14665
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC119714082
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 8839
nc RNA class: lncRNA
gene: LOC119714082
product: uncharacterized LOC119714082, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 79 samples with support for all annotated introns
transcript id: XR_005261252.1
SIO_010081: LOC119714082
subclass of: SO_0000673
so part of: LOC119714082
location: join(13107..13380,14665..15160)
location: region:13107-15160:1
so has part: feature:13107-13380:1:exon
so has part: feature:14665-15160:1:exon

position:13107:1
position: 13107
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:13107-13380:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:14665-15160:1:exon

ZNF652
type: Gene
subclass of: SO_0000704
RO_0002162: 8839
gene: ZNF652
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 16265..41561
location: region:16265-41561:1
so has part: feature:16265-41561:1:exon
subclass of: SO_0000010

101794887
type: Gene
SIO_000068: ncbigene

position:16265:1
position: 16265
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:41561:1
position: 41561
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:16265-41561:1:exon

ZNF652
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8839
gene: ZNF652
product: zinc finger protein 652, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 126 samples with support for all annotated introns
transcript id: XM_027445463.2
SIO_010081: ZNF652
subclass of: SO_0000673
so part of: ZNF652
location: join(16265..16406,31963..33114,36493..36640,36948..37063,39779..39923,40327..41548)
location: region:16265-41548:1
so has part: feature:16265-16406:1:exon
so has part: feature:31963-33114:1:exon
so has part: feature:36493-36640:1:exon
so has part: feature:36948-37063:1:exon
so has part: feature:39779-39923:1:exon
so has part: feature:40327-41548:1:exon

position:41548:1
position: 41548
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:16265-16406:1:exon

position:16406:1
position: 16406
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:31963-33114:1:exon

position:31963:1
position: 31963
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:33114:1
position: 33114
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:36493-36640:1:exon

position:36493:1
position: 36493
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:36640:1
position: 36640
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:36948-37063:1:exon

position:36948:1
position: 36948
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:37063:1
position: 37063
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:39779-39923:1:exon

position:39779:1
position: 39779
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:39923:1
position: 39923
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:40327-41548:1:exon

position:40327:1
position: 40327
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

ZNF652
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8839
gene: ZNF652
product: zinc finger protein 652, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 105 samples with support for all annotated introns
transcript id: XM_013105670.4
SIO_010081: ZNF652
subclass of: SO_0000673
so part of: ZNF652
location: join(16899..17090,31963..33114,36493..36640,36948..37063,39779..39923,40327..41548)
location: region:16899-41548:1
so has part: feature:16899-17090:1:exon
so has part: feature:31963-33114:1:exon
so has part: feature:36493-36640:1:exon
so has part: feature:36948-37063:1:exon
so has part: feature:39779-39923:1:exon
so has part: feature:40327-41548:1:exon

position:16899:1
position: 16899
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:16899-17090:1:exon

position:17090:1
position: 17090
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:31963-33114:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:36493-36640:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:36948-37063:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:39779-39923:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:40327-41548:1:exon

ZNF652
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8839
gene: ZNF652
product: zinc finger protein 652, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 83 samples with support for all annotated introns
transcript id: XM_038168817.1
SIO_010081: ZNF652
subclass of: SO_0000673
so part of: ZNF652
location: join(29610..29627,30381..30471,31963..33114,36493..36640,36948..37063,39779..39923,40327..41561)
location: region:29610-41561:1
so has part: feature:29610-29627:1:exon
so has part: feature:30381-30471:1:exon
so has part: feature:31963-33114:1:exon
so has part: feature:36493-36640:1:exon
so has part: feature:36948-37063:1:exon
so has part: feature:39779-39923:1:exon
so has part: feature:40327-41561:1:exon

position:29610:1
position: 29610
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:29610-29627:1:exon

position:29627:1
position: 29627
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:30381-30471:1:exon

position:30381:1
position: 30381
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:30471:1
position: 30471
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:31963-33114:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:36493-36640:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:36948-37063:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:39779-39923:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:40327-41561:1:exon

ZNF652
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8839
gene: ZNF652
product: zinc finger protein 652, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 118 samples with support for all annotated introns
transcript id: XM_005026139.5
SIO_010081: ZNF652
subclass of: SO_0000673
so part of: ZNF652
location: join(29655..30471,31963..33114,36493..36640,36948..37063,39779..39923,40327..41561)
location: region:29655-41561:1
so has part: feature:29655-30471:1:exon
so has part: feature:31963-33114:1:exon
so has part: feature:36493-36640:1:exon
so has part: feature:36948-37063:1:exon
so has part: feature:39779-39923:1:exon
so has part: feature:40327-41561:1:exon

position:29655:1
position: 29655
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:29655-30471:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:31963-33114:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:36493-36640:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:36948-37063:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:39779-39923:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:40327-41561:1:exon

ZNF652
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8839
gene: ZNF652
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: zinc finger protein 652
translation: MSQTTNSCQQLVENCAVHVAGMAQDDSHRGQVPPTFYHGASQELDLSTKVYKRESGSPYSVLVDSKMSKPHLHEREEQPYFRENRSVGEVRAVKEDRENSDDSEEEEEEEDEVTYKREQIIVEVNLNNQTLNVSKGEKGVPSQSKETAVLKTSSEEEEGDSGEEATEESNDEEENERQKKKEKRVEKVSVAQRRTRRAASAAAATTSPSPRTTRGRRKSVEPPKRKKKAAKEPKAPVQKSKCEEKETLTCEKCPRVFNTRWYLEKHMNVTHRRMQICDKCGKKFVLESELSLHQQTDCEKNIQCVSCNKSFKKLWSLHEHIKIVHGYAEKKFSCEICEKKFYTMAHVRKHMVAHTKDMPFTCETCGKSFKRSMSLKVHSLQHSGEKPFRCENCDERFQYKYQLRSHMSIHIGHKQFMCQWCGKDFNMKQYFDEHMKTHTGEKPFICEICGKSFTSRPNMKRHRRTHTGEKPYPCDVCGQRFRFSNMLKAHKEKCFRVTSPVNVSSAVQIPLSTAASATTVPAVVNTPTTPTPPMNLNPVNTLPPRPIPHPYSHLHLHPHPHHPHHLPVPPVPHLPPPPALFKSEPLNHRGQSEDNFLRHLAEKNSSAQHH
SIO_010081: ZNF652
subclass of: SO_0000673
so part of: ZNF652
location: join(32206..33114,36493..36640,36948..37063,39779..39923,40327..40841)
location: region:32206-40841:1
so has part: feature:32206-33114:1:exon
so has part: feature:36493-36640:1:exon
so has part: feature:36948-37063:1:exon
so has part: feature:39779-39923:1:exon
so has part: feature:40327-40841:1:exon

XP_027301264.1
type: Protein
SIO_000068: ncbiprotein

position:32206:1
position: 32206
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:40841:1
position: 40841
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:32206-33114:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:36493-36640:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:36948-37063:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:39779-39923:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:40327-40841:1:exon

ZNF652
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8839
gene: ZNF652
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: zinc finger protein 652
translation: MSQTTNSCQQLVENCAVHVAGMAQDDSHRGQVPPTFYHGASQELDLSTKVYKRESGSPYSVLVDSKMSKPHLHEREEQPYFRENRSVGEVRAVKEDRENSDDSEEEEEEEDEVTYKREQIIVEVNLNNQTLNVSKGEKGVPSQSKETAVLKTSSEEEEGDSGEEATEESNDEEENERQKKKEKRVEKVSVAQRRTRRAASAAAATTSPSPRTTRGRRKSVEPPKRKKKAAKEPKAPVQKSKCEEKETLTCEKCPRVFNTRWYLEKHMNVTHRRMQICDKCGKKFVLESELSLHQQTDCEKNIQCVSCNKSFKKLWSLHEHIKIVHGYAEKKFSCEICEKKFYTMAHVRKHMVAHTKDMPFTCETCGKSFKRSMSLKVHSLQHSGEKPFRCENCDERFQYKYQLRSHMSIHIGHKQFMCQWCGKDFNMKQYFDEHMKTHTGEKPFICEICGKSFTSRPNMKRHRRTHTGEKPYPCDVCGQRFRFSNMLKAHKEKCFRVTSPVNVSSAVQIPLSTAASATTVPAVVNTPTTPTPPMNLNPVNTLPPRPIPHPYSHLHLHPHPHHPHHLPVPPVPHLPPPPALFKSEPLNHRGQSEDNFLRHLAEKNSSAQHH
SIO_010081: ZNF652
subclass of: SO_0000673
so part of: ZNF652
location: join(32206..33114,36493..36640,36948..37063,39779..39923,40327..40841)
location: region:32206-40841:1
so has part: feature:32206-33114:1:exon
so has part: feature:36493-36640:1:exon
so has part: feature:36948-37063:1:exon
so has part: feature:39779-39923:1:exon
so has part: feature:40327-40841:1:exon

XP_038024745.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:32206-33114:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:36493-36640:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:36948-37063:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:39779-39923:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:40327-40841:1:exon

ZNF652
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8839
gene: ZNF652
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: zinc finger protein 652
translation: MSQTTNSCQQLVENCAVHVAGMAQDDSHRGQVPPTFYHGASQELDLSTKVYKRESGSPYSVLVDSKMSKPHLHEREEQPYFRENRSVGEVRAVKEDRENSDDSEEEEEEEDEVTYKREQIIVEVNLNNQTLNVSKGEKGVPSQSKETAVLKTSSEEEEGDSGEEATEESNDEEENERQKKKEKRVEKVSVAQRRTRRAASAAAATTSPSPRTTRGRRKSVEPPKRKKKAAKEPKAPVQKSKCEEKETLTCEKCPRVFNTRWYLEKHMNVTHRRMQICDKCGKKFVLESELSLHQQTDCEKNIQCVSCNKSFKKLWSLHEHIKIVHGYAEKKFSCEICEKKFYTMAHVRKHMVAHTKDMPFTCETCGKSFKRSMSLKVHSLQHSGEKPFRCENCDERFQYKYQLRSHMSIHIGHKQFMCQWCGKDFNMKQYFDEHMKTHTGEKPFICEICGKSFTSRPNMKRHRRTHTGEKPYPCDVCGQRFRFSNMLKAHKEKCFRVTSPVNVSSAVQIPLSTAASATTVPAVVNTPTTPTPPMNLNPVNTLPPRPIPHPYSHLHLHPHPHHPHHLPVPPVPHLPPPPALFKSEPLNHRGQSEDNFLRHLAEKNSSAQHH
SIO_010081: ZNF652
subclass of: SO_0000673
so part of: ZNF652
location: join(32206..33114,36493..36640,36948..37063,39779..39923,40327..40841)
location: region:32206-40841:1
so has part: feature:32206-33114:1:exon
so has part: feature:36493-36640:1:exon
so has part: feature:36948-37063:1:exon
so has part: feature:39779-39923:1:exon
so has part: feature:40327-40841:1:exon

XP_005026196.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:32206-33114:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:36493-36640:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:36948-37063:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:39779-39923:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:40327-40841:1:exon

ZNF652
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8839
gene: ZNF652
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: zinc finger protein 652
translation: MSQTTNSCQQLVENCAVHVAGMAQDDSHRGQVPPTFYHGASQELDLSTKVYKRESGSPYSVLVDSKMSKPHLHEREEQPYFRENRSVGEVRAVKEDRENSDDSEEEEEEEDEVTYKREQIIVEVNLNNQTLNVSKGEKGVPSQSKETAVLKTSSEEEEGDSGEEATEESNDEEENERQKKKEKRVEKVSVAQRRTRRAASAAAATTSPSPRTTRGRRKSVEPPKRKKKAAKEPKAPVQKSKCEEKETLTCEKCPRVFNTRWYLEKHMNVTHRRMQICDKCGKKFVLESELSLHQQTDCEKNIQCVSCNKSFKKLWSLHEHIKIVHGYAEKKFSCEICEKKFYTMAHVRKHMVAHTKDMPFTCETCGKSFKRSMSLKVHSLQHSGEKPFRCENCDERFQYKYQLRSHMSIHIGHKQFMCQWCGKDFNMKQYFDEHMKTHTGEKPFICEICGKSFTSRPNMKRHRRTHTGEKPYPCDVCGQRFRFSNMLKAHKEKCFRVTSPVNVSSAVQIPLSTAASATTVPAVVNTPTTPTPPMNLNPVNTLPPRPIPHPYSHLHLHPHPHHPHHLPVPPVPHLPPPPALFKSEPLNHRGQSEDNFLRHLAEKNSSAQHH
SIO_010081: ZNF652
subclass of: SO_0000673
so part of: ZNF652
location: join(32206..33114,36493..36640,36948..37063,39779..39923,40327..40841)
location: region:32206-40841:1
so has part: feature:32206-33114:1:exon
so has part: feature:36493-36640:1:exon
so has part: feature:36948-37063:1:exon
so has part: feature:39779-39923:1:exon
so has part: feature:40327-40841:1:exon

XP_012961124.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:32206-33114:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:36493-36640:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:36948-37063:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:39779-39923:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:40327-40841:1:exon

PHOSPHO1
type: Gene
subclass of: SO_0000704
RO_0002162: 8839
gene: PHOSPHO1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 54493..62104
location: region:54493-62104:1
so has part: feature:54493-62104:1:exon
subclass of: SO_0000010

101795093
type: Gene
SIO_000068: ncbigene

position:54493:1
position: 54493
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:62104:1
position: 62104
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:54493-62104:1:exon

PHOSPHO1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8839
gene: PHOSPHO1
product: phosphoethanolamine/phosphocholine phosphatase 1, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 45 samples with support for all annotated introns
transcript id: XM_027445576.2
SIO_010081: PHOSPHO1
subclass of: SO_0000673
so part of: PHOSPHO1
location: join(54493..54790,55439..55647,56656..56755,60633..62104)
location: region:54493-62104:1
so has part: feature:54493-54790:1:exon
so has part: feature:55439-55647:1:exon
so has part: feature:56656-56755:1:exon
so has part: feature:60633-62104:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:54493-54790:1:exon

position:54790:1
position: 54790
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:55439-55647:1:exon

position:55439:1
position: 55439
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:55647:1
position: 55647
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:56656-56755:1:exon

position:56656:1
position: 56656
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:56755:1
position: 56755
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:60633-62104:1:exon

position:60633:1
position: 60633
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

PHOSPHO1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8839
gene: PHOSPHO1
product: phosphoethanolamine/phosphocholine phosphatase 1, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 54 samples with support for all annotated introns
transcript id: XM_027445577.2
SIO_010081: PHOSPHO1
subclass of: SO_0000673
so part of: PHOSPHO1
location: join(54493..54790,56656..56755,60633..62104)
location: region:54493-62104:1
so has part: feature:54493-54790:1:exon
so has part: feature:56656-56755:1:exon
so has part: feature:60633-62104:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:54493-54790:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:56656-56755:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:60633-62104:1:exon

PHOSPHO1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8839
gene: PHOSPHO1
product: phosphoethanolamine/phosphocholine phosphatase 1, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 54 samples with support for all annotated introns
transcript id: XM_027445575.2
SIO_010081: PHOSPHO1
subclass of: SO_0000673
so part of: PHOSPHO1
location: join(54496..54790,55439..55651,56656..56755,60633..62104)
location: region:54496-62104:1
so has part: feature:54496-54790:1:exon
so has part: feature:55439-55651:1:exon
so has part: feature:56656-56755:1:exon
so has part: feature:60633-62104:1:exon

position:54496:1
position: 54496
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:54496-54790:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:55439-55651:1:exon

position:55651:1
position: 55651
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:56656-56755:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:60633-62104:1:exon

PHOSPHO1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8839
gene: PHOSPHO1
product: phosphoethanolamine/phosphocholine phosphatase 1, transcript variant X7
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 61 samples with support for all annotated introns
transcript id: XM_027445581.2
SIO_010081: PHOSPHO1
subclass of: SO_0000673
so part of: PHOSPHO1
location: join(54504..54790,60633..62104)
location: region:54504-62104:1
so has part: feature:54504-54790:1:exon
so has part: feature:60633-62104:1:exon

position:54504:1
position: 54504
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:54504-54790:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:60633-62104:1:exon

PHOSPHO1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8839
gene: PHOSPHO1
product: phosphoethanolamine/phosphocholine phosphatase 1, transcript variant X6
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 98 samples with support for all annotated introns
transcript id: XM_027445579.2
SIO_010081: PHOSPHO1
subclass of: SO_0000673
so part of: PHOSPHO1
location: join(54514..54790,59657..59773,60633..62104)
location: region:54514-62104:1
so has part: feature:54514-54790:1:exon
so has part: feature:59657-59773:1:exon
so has part: feature:60633-62104:1:exon

position:54514:1
position: 54514
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:54514-54790:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:59657-59773:1:exon

position:59657:1
position: 59657
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:59773:1
position: 59773
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:60633-62104:1:exon

PHOSPHO1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8839
gene: PHOSPHO1
product: phosphoethanolamine/phosphocholine phosphatase 1, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 107 samples with support for all annotated introns
transcript id: XM_027445578.2
SIO_010081: PHOSPHO1
subclass of: SO_0000673
so part of: PHOSPHO1
location: join(54516..54790,55439..55651,56656..56755,59657..59773,60633..62104)
location: region:54516-62104:1
so has part: feature:54516-54790:1:exon
so has part: feature:55439-55651:1:exon
so has part: feature:56656-56755:1:exon
so has part: feature:59657-59773:1:exon
so has part: feature:60633-62104:1:exon

position:54516:1
position: 54516
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:54516-54790:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:55439-55651:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:56656-56755:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:59657-59773:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:60633-62104:1:exon

PHOSPHO1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8839
gene: PHOSPHO1
product: phosphoethanolamine/phosphocholine phosphatase 1, transcript variant X5
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 115 samples with support for all annotated introns
transcript id: XM_038168818.1
SIO_010081: PHOSPHO1
subclass of: SO_0000673
so part of: PHOSPHO1
location: join(54516..54790,56656..56755,59657..59773,60633..62104)
location: region:54516-62104:1
so has part: feature:54516-54790:1:exon
so has part: feature:56656-56755:1:exon
so has part: feature:59657-59773:1:exon
so has part: feature:60633-62104:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:54516-54790:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:56656-56755:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:59657-59773:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:60633-62104:1:exon

PHOSPHO1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8839
gene: PHOSPHO1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: phosphoethanolamine/phosphocholine phosphatase isoform X1
translation: MLGSTATFILFWKDFFFTEGGRTLPGSSCLGVGMASSQPPKYLLIFDFDETIINENSDDSIIRAAPGQALPEHIRQTFCEGFYNEYMQRVLTYMGDQGVKMGDFKTVYENIPLSPGMPDLFQFLSKNHEVFEIILISDANMFGIECNLRAAGFYSLFRKIFSNPSSFDKRGYFTLGPYHSHKCLDCPANMCKRKILTEYLAERAQEEVEFERVFYVGDGANDFCPSVTLTSADIAFPRKGYPMHRMMQEMENKQPGAFQATVVPWESATEVTRYLQDVLKKC
SIO_010081: PHOSPHO1
subclass of: SO_0000673
so part of: PHOSPHO1
location: join(56666..56755,60633..61391)
location: region:56666-61391:1
so has part: feature:56666-56755:1:exon
so has part: feature:60633-61391:1:exon

XP_027301376.1
type: Protein
SIO_000068: ncbiprotein

position:56666:1
position: 56666
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:61391:1
position: 61391
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:56666-56755:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:60633-61391:1:exon

PHOSPHO1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8839
gene: PHOSPHO1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: phosphoethanolamine/phosphocholine phosphatase isoform X1
translation: MLGSTATFILFWKDFFFTEGGRTLPGSSCLGVGMASSQPPKYLLIFDFDETIINENSDDSIIRAAPGQALPEHIRQTFCEGFYNEYMQRVLTYMGDQGVKMGDFKTVYENIPLSPGMPDLFQFLSKNHEVFEIILISDANMFGIECNLRAAGFYSLFRKIFSNPSSFDKRGYFTLGPYHSHKCLDCPANMCKRKILTEYLAERAQEEVEFERVFYVGDGANDFCPSVTLTSADIAFPRKGYPMHRMMQEMENKQPGAFQATVVPWESATEVTRYLQDVLKKC
SIO_010081: PHOSPHO1
subclass of: SO_0000673
so part of: PHOSPHO1
location: join(56666..56755,60633..61391)
location: region:56666-61391:1
so has part: feature:56666-56755:1:exon
so has part: feature:60633-61391:1:exon

XP_027301377.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:56666-56755:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:60633-61391:1:exon

PHOSPHO1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8839
gene: PHOSPHO1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: phosphoethanolamine/phosphocholine phosphatase isoform X1
translation: MLGSTATFILFWKDFFFTEGGRTLPGSSCLGVGMASSQPPKYLLIFDFDETIINENSDDSIIRAAPGQALPEHIRQTFCEGFYNEYMQRVLTYMGDQGVKMGDFKTVYENIPLSPGMPDLFQFLSKNHEVFEIILISDANMFGIECNLRAAGFYSLFRKIFSNPSSFDKRGYFTLGPYHSHKCLDCPANMCKRKILTEYLAERAQEEVEFERVFYVGDGANDFCPSVTLTSADIAFPRKGYPMHRMMQEMENKQPGAFQATVVPWESATEVTRYLQDVLKKC
SIO_010081: PHOSPHO1
subclass of: SO_0000673
so part of: PHOSPHO1
location: join(56666..56755,60633..61391)
location: region:56666-61391:1
so has part: feature:56666-56755:1:exon
so has part: feature:60633-61391:1:exon

XP_027301378.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:56666-56755:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:60633-61391:1:exon

PHOSPHO1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8839
gene: PHOSPHO1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: phosphoethanolamine/phosphocholine phosphatase isoform X2
translation: MKRCCEGVGLPCLFKGVGMASSQPPKYLLIFDFDETIINENSDDSIIRAAPGQALPEHIRQTFCEGFYNEYMQRVLTYMGDQGVKMGDFKTVYENIPLSPGMPDLFQFLSKNHEVFEIILISDANMFGIECNLRAAGFYSLFRKIFSNPSSFDKRGYFTLGPYHSHKCLDCPANMCKRKILTEYLAERAQEEVEFERVFYVGDGANDFCPSVTLTSADIAFPRKGYPMHRMMQEMENKQPGAFQATVVPWESATEVTRYLQDVLKKC
SIO_010081: PHOSPHO1
subclass of: SO_0000673
so part of: PHOSPHO1
location: join(59729..59773,60633..61391)
location: region:59729-61391:1
so has part: feature:59729-59773:1:exon
so has part: feature:60633-61391:1:exon

XP_027301379.1
type: Protein
SIO_000068: ncbiprotein

position:59729:1
position: 59729
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:59729-59773:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:60633-61391:1:exon

PHOSPHO1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8839
gene: PHOSPHO1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: phosphoethanolamine/phosphocholine phosphatase isoform X2
translation: MKRCCEGVGLPCLFKGVGMASSQPPKYLLIFDFDETIINENSDDSIIRAAPGQALPEHIRQTFCEGFYNEYMQRVLTYMGDQGVKMGDFKTVYENIPLSPGMPDLFQFLSKNHEVFEIILISDANMFGIECNLRAAGFYSLFRKIFSNPSSFDKRGYFTLGPYHSHKCLDCPANMCKRKILTEYLAERAQEEVEFERVFYVGDGANDFCPSVTLTSADIAFPRKGYPMHRMMQEMENKQPGAFQATVVPWESATEVTRYLQDVLKKC
SIO_010081: PHOSPHO1
subclass of: SO_0000673
so part of: PHOSPHO1
location: join(59729..59773,60633..61391)
location: region:59729-61391:1
so has part: feature:59729-59773:1:exon
so has part: feature:60633-61391:1:exon

XP_027301380.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:59729-59773:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:60633-61391:1:exon

PHOSPHO1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8839
gene: PHOSPHO1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: phosphoethanolamine/phosphocholine phosphatase isoform X2
translation: MKRCCEGVGLPCLFKGVGMASSQPPKYLLIFDFDETIINENSDDSIIRAAPGQALPEHIRQTFCEGFYNEYMQRVLTYMGDQGVKMGDFKTVYENIPLSPGMPDLFQFLSKNHEVFEIILISDANMFGIECNLRAAGFYSLFRKIFSNPSSFDKRGYFTLGPYHSHKCLDCPANMCKRKILTEYLAERAQEEVEFERVFYVGDGANDFCPSVTLTSADIAFPRKGYPMHRMMQEMENKQPGAFQATVVPWESATEVTRYLQDVLKKC
SIO_010081: PHOSPHO1
subclass of: SO_0000673
so part of: PHOSPHO1
location: join(59729..59773,60633..61391)
location: region:59729-61391:1
so has part: feature:59729-59773:1:exon
so has part: feature:60633-61391:1:exon

XP_038024746.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:59729-59773:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:60633-61391:1:exon

PHOSPHO1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8839
gene: PHOSPHO1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: phosphoethanolamine/phosphocholine phosphatase isoform X3
translation: MASSQPPKYLLIFDFDETIINENSDDSIIRAAPGQALPEHIRQTFCEGFYNEYMQRVLTYMGDQGVKMGDFKTVYENIPLSPGMPDLFQFLSKNHEVFEIILISDANMFGIECNLRAAGFYSLFRKIFSNPSSFDKRGYFTLGPYHSHKCLDCPANMCKRKILTEYLAERAQEEVEFERVFYVGDGANDFCPSVTLTSADIAFPRKGYPMHRMMQEMENKQPGAFQATVVPWESATEVTRYLQDVLKKC
SIO_010081: PHOSPHO1
subclass of: SO_0000673
so part of: PHOSPHO1
location: 60642..61391
location: region:60642-61391:1
so has part: feature:60642-61391:1:exon

XP_027301382.1
type: Protein
SIO_000068: ncbiprotein

position:60642:1
position: 60642
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:60642-61391:1:exon

ABI3
type: Gene
subclass of: SO_0000704
RO_0002162: 8839
gene: ABI3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(63183..69346)
location: region:63183-69346:-1
so has part: feature:63183-69346:-1:exon
subclass of: SO_0000010

101795546
type: Gene
SIO_000068: ncbigene

position:63183:-1
position: 63183
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:69346:-1
position: 69346
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:63183-69346:-1:exon

ABI3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8839
gene: ABI3
product: ABI family member 3, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 27 samples with support for all annotated introns
transcript id: XM_005026144.5
SIO_010081: ABI3
subclass of: SO_0000673
so part of: ABI3
location: complement(join(63183..64153,64369..64494,64619..64800,65237..65332,65593..65675,66382..66558,68529..69346))
location: region:63183-69346:-1
so has part: feature:68529-69346:-1:exon
so has part: feature:66382-66558:-1:exon
so has part: feature:65593-65675:-1:exon
so has part: feature:65237-65332:-1:exon
so has part: feature:64619-64800:-1:exon
so has part: feature:64369-64494:-1:exon
so has part: feature:63183-64153:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:68529-69346:-1:exon

position:68529:-1
position: 68529
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:66382-66558:-1:exon

position:66382:-1
position: 66382
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:66558:-1
position: 66558
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:65593-65675:-1:exon

position:65593:-1
position: 65593
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:65675:-1
position: 65675
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:65237-65332:-1:exon

position:65237:-1
position: 65237
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:65332:-1
position: 65332
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:64619-64800:-1:exon

position:64619:-1
position: 64619
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:64800:-1
position: 64800
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:64369-64494:-1:exon

position:64369:-1
position: 64369
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:64494:-1
position: 64494
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:63183-64153:-1:exon

position:64153:-1
position: 64153
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

ABI3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8839
gene: ABI3
product: ABI family member 3, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 67 samples with support for all annotated introns
transcript id: XM_005026143.4
SIO_010081: ABI3
subclass of: SO_0000673
so part of: ABI3
location: complement(join(63183..64153,64369..64494,64619..64800,65237..65332,65593..65675,66382..66558,67448..67615,68529..69320))
location: region:63183-69320:-1
so has part: feature:68529-69320:-1:exon
so has part: feature:67448-67615:-1:exon
so has part: feature:66382-66558:-1:exon
so has part: feature:65593-65675:-1:exon
so has part: feature:65237-65332:-1:exon
so has part: feature:64619-64800:-1:exon
so has part: feature:64369-64494:-1:exon
so has part: feature:63183-64153:-1:exon

position:69320:-1
position: 69320
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:68529-69320:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:67448-67615:-1:exon

position:67448:-1
position: 67448
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:67615:-1
position: 67615
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:66382-66558:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:65593-65675:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:65237-65332:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:64619-64800:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:64369-64494:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:63183-64153:-1:exon

ABI3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8839
gene: ABI3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: ABI gene family member 3 isoform X2
translation: MAGEVICLWGIPVGAGTLRDPQALRQQCCELQNPAPRRLGRKWALELSTMSELQQLQQCDIPAARQVLRDNHCNLHQVADYCESNYVQRIDMHKEKVSRREIGSLTISKRFPAHEKIMSPPSPPCLEPYYRKPLNFSILDDIGHGIKDHSTQLSRTGTLARKGIKSATQSAGTLGRSTRVPEPIQPPVVPLGKLSTASSTSSLTSVSSTGALGDTGEGIPAAPALLSLPGPPPLAAATVLPPSPLPTDLPPPPLGDLALPPLDIIPPVSDDLESPLLPPPALPDFEDFTPPLPPDVEEPPWVPASYLEKVVTLYPYAQQKDNELSFQPGALIYVTRRYSDGWCEGVMGEEVGFFPGNYVEPF
SIO_010081: ABI3
subclass of: SO_0000673
so part of: ABI3
location: complement(join(63993..64153,64369..64494,64619..64800,65237..65332,65593..65675,66382..66558,68529..68792))
location: region:63993-68792:-1
so has part: feature:68529-68792:-1:exon
so has part: feature:66382-66558:-1:exon
so has part: feature:65593-65675:-1:exon
so has part: feature:65237-65332:-1:exon
so has part: feature:64619-64800:-1:exon
so has part: feature:64369-64494:-1:exon
so has part: feature:63993-64153:-1:exon

XP_005026201.3
type: Protein
SIO_000068: ncbiprotein

position:63993:-1
position: 63993
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:68792:-1
position: 68792
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:68529-68792:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:66382-66558:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:65593-65675:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:65237-65332:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:64619-64800:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:64369-64494:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:63993-64153:-1:exon

ABI3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8839
gene: ABI3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: ABI gene family member 3 isoform X1
translation: MAGEVICLWGIPVGAGTLRDPQALRQQCCELQNPAPRRLGRKWALELSTMSELQQLQQCDIPAARQVLRDNHCNLHQVADYCESNYVQASDKQKALEETMAFSTQSLASVAYQVSSLATTLLQLLDLQVAELRKVEANISCVAQRIDMHKEKVSRREIGSLTISKRFPAHEKIMSPPSPPCLEPYYRKPLNFSILDDIGHGIKDHSTQLSRTGTLARKGIKSATQSAGTLGRSTRVPEPIQPPVVPLGKLSTASSTSSLTSVSSTGALGDTGEGIPAAPALLSLPGPPPLAAATVLPPSPLPTDLPPPPLGDLALPPLDIIPPVSDDLESPLLPPPALPDFEDFTPPLPPDVEEPPWVPASYLEKVVTLYPYAQQKDNELSFQPGALIYVTRRYSDGWCEGVMGEEVGFFPGNYVEPF
SIO_010081: ABI3
subclass of: SO_0000673
so part of: ABI3
location: complement(join(63993..64153,64369..64494,64619..64800,65237..65332,65593..65675,66382..66558,67448..67615,68529..68792))
location: region:63993-68792:-1
so has part: feature:68529-68792:-1:exon
so has part: feature:67448-67615:-1:exon
so has part: feature:66382-66558:-1:exon
so has part: feature:65593-65675:-1:exon
so has part: feature:65237-65332:-1:exon
so has part: feature:64619-64800:-1:exon
so has part: feature:64369-64494:-1:exon
so has part: feature:63993-64153:-1:exon

XP_005026200.3
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:68529-68792:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:67448-67615:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:66382-66558:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:65593-65675:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:65237-65332:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:64619-64800:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:64369-64494:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:63993-64153:-1:exon

GNGT2
type: Gene
subclass of: SO_0000704
RO_0002162: 8839
gene: GNGT2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 69469..72491
location: region:69469-72491:1
so has part: feature:69469-72491:1:exon
subclass of: SO_0000010

101795862
type: Gene
SIO_000068: ncbigene

position:69469:1
position: 69469
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:72491:1
position: 72491
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:69469-72491:1:exon

GNGT2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8839
gene: GNGT2
product: G protein subunit gamma transducin 2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 17 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 76 samples with support for all annotated introns
transcript id: XM_005026145.5
SIO_010081: GNGT2
subclass of: SO_0000673
so part of: GNGT2
location: join(69469..69770,70385..70474,70840..72491)
location: region:69469-72491:1
so has part: feature:69469-69770:1:exon
so has part: feature:70385-70474:1:exon
so has part: feature:70840-72491:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:69469-69770:1:exon

position:69770:1
position: 69770
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:70385-70474:1:exon

position:70385:1
position: 70385
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:70474:1
position: 70474
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:70840-72491:1:exon

position:70840:1
position: 70840
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

GNGT2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8839
gene: GNGT2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: guanine nucleotide-binding protein G(I)/G(S)/G(O) subunit gamma-T2
translation: MAQDMTEKELLKMELDQLKKEVKNERQMVSKTGKEIKEYVESMAGEDPLLKGVPEDKNPFKEKGGCTIS
SIO_010081: GNGT2
subclass of: SO_0000673
so part of: GNGT2
location: join(70391..70474,70840..70965)
location: region:70391-70965:1
so has part: feature:70391-70474:1:exon
so has part: feature:70840-70965:1:exon

XP_005026202.1
type: Protein
SIO_000068: ncbiprotein

position:70391:1
position: 70391
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:70965:1
position: 70965
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:70391-70474:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:70840-70965:1:exon

TRNAQ-UUG
type: Gene
subclass of: SO_0000704
RO_0002162: 8839
gene: TRNAQ-UUG
note: Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
so part of: sequence
location: complement(73240..73311)
location: region:73240-73311:-1
so has part: feature:73240-73311:-1:exon
subclass of: SO_0000663

113840064
type: Gene
SIO_000068: ncbigene

position:73240:-1
position: 73240
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:73311:-1
position: 73311
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:73240-73311:-1:exon

TRNAQ-UUG
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 8839
gene: TRNAQ-UUG
product: tRNA-Gln
inference: COORDINATES: profile:tRNAscan-SE:2.0.4
note: transfer RNA glutamine (anticodon UUG); Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
anticodon: (pos:complement(73276..73278),aa:Gln,seq:ttg)
SIO_010081: TRNAQ-UUG
subclass of: SO_0000673
so part of: TRNAQ-UUG
location: complement(73240..73311)
location: region:73240-73311:-1
so has part: feature:73240-73311:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:73240-73311:-1:exon

IGF2BP1
type: Gene
subclass of: SO_0000704
RO_0002162: 8839
gene: IGF2BP1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(74708..111318)
location: region:74708-111318:-1
so has part: feature:74708-111318:-1:exon
subclass of: SO_0000010

101800326
type: Gene
SIO_000068: ncbigene

position:74708:-1
position: 74708
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:111318:-1
position: 111318
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:74708-111318:-1:exon

IGF2BP1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8839
gene: IGF2BP1
product: insulin like growth factor 2 mRNA binding protein 1, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 10 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 60 samples with support for all annotated introns
transcript id: XM_027445469.2
SIO_010081: IGF2BP1
subclass of: SO_0000673
so part of: IGF2BP1
location: complement(join(74708..82987,83498..83611,83797..83928,84278..84352,84551..84667,84974..85096,85227..85362,85863..85985,86243..86377,87106..87387,89148..89211,90445..90496,91060..91108,109570..109630,110671..111318))
location: region:74708-111318:-1
so has part: feature:110671-111318:-1:exon
so has part: feature:109570-109630:-1:exon
so has part: feature:91060-91108:-1:exon
so has part: feature:90445-90496:-1:exon
so has part: feature:89148-89211:-1:exon
so has part: feature:87106-87387:-1:exon
so has part: feature:86243-86377:-1:exon
so has part: feature:85863-85985:-1:exon
so has part: feature:85227-85362:-1:exon
so has part: feature:84974-85096:-1:exon
so has part: feature:84551-84667:-1:exon
so has part: feature:84278-84352:-1:exon
so has part: feature:83797-83928:-1:exon
so has part: feature:83498-83611:-1:exon
so has part: feature:74708-82987:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:110671-111318:-1:exon

position:110671:-1
position: 110671
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:109570-109630:-1:exon

position:109570:-1
position: 109570
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:109630:-1
position: 109630
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:91060-91108:-1:exon

position:91060:-1
position: 91060
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:91108:-1
position: 91108
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:90445-90496:-1:exon

position:90445:-1
position: 90445
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:90496:-1
position: 90496
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:89148-89211:-1:exon

position:89148:-1
position: 89148
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:89211:-1
position: 89211
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:87106-87387:-1:exon

position:87106:-1
position: 87106
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:87387:-1
position: 87387
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:86243-86377:-1:exon

position:86243:-1
position: 86243
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:86377:-1
position: 86377
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:85863-85985:-1:exon

position:85863:-1
position: 85863
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:85985:-1
position: 85985
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:85227-85362:-1:exon

position:85227:-1
position: 85227
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:85362:-1
position: 85362
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:84974-85096:-1:exon

position:84974:-1
position: 84974
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:85096:-1
position: 85096
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:84551-84667:-1:exon

position:84551:-1
position: 84551
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:84667:-1
position: 84667
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:84278-84352:-1:exon

position:84278:-1
position: 84278
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:84352:-1
position: 84352
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:83797-83928:-1:exon

position:83797:-1
position: 83797
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:83928:-1
position: 83928
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:83498-83611:-1:exon

position:83498:-1
position: 83498
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:83611:-1
position: 83611
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:74708-82987:-1:exon

position:82987:-1
position: 82987
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

IGF2BP1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8839
gene: IGF2BP1
product: insulin like growth factor 2 mRNA binding protein 1, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 35 samples with support for all annotated introns
transcript id: XM_038168608.1
SIO_010081: IGF2BP1
subclass of: SO_0000673
so part of: IGF2BP1
location: complement(join(74708..82987,83498..83611,83797..83928,84551..84667,84974..85096,85227..85362,85863..85985,86243..86377,87106..87387,89148..89211,90445..90496,91060..91108,109570..109630,110671..111306))
location: region:74708-111306:-1
so has part: feature:110671-111306:-1:exon
so has part: feature:109570-109630:-1:exon
so has part: feature:91060-91108:-1:exon
so has part: feature:90445-90496:-1:exon
so has part: feature:89148-89211:-1:exon
so has part: feature:87106-87387:-1:exon
so has part: feature:86243-86377:-1:exon
so has part: feature:85863-85985:-1:exon
so has part: feature:85227-85362:-1:exon
so has part: feature:84974-85096:-1:exon
so has part: feature:84551-84667:-1:exon
so has part: feature:83797-83928:-1:exon
so has part: feature:83498-83611:-1:exon
so has part: feature:74708-82987:-1:exon

position:111306:-1
position: 111306
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:110671-111306:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:109570-109630:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:91060-91108:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:90445-90496:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:89148-89211:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:87106-87387:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:86243-86377:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:85863-85985:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:85227-85362:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:84974-85096:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:84551-84667:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:83797-83928:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:83498-83611:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:74708-82987:-1:exon

IGF2BP1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8839
gene: IGF2BP1
product: insulin like growth factor 2 mRNA binding protein 1, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 11 samples with support for all annotated introns
transcript id: XM_038168609.1
SIO_010081: IGF2BP1
subclass of: SO_0000673
so part of: IGF2BP1
location: complement(join(74708..82987,83498..83611,83797..83928,84278..84352,84551..84667,84974..85096,85227..85362,85863..85985,86243..86377,87106..87387,89148..89211,90445..90496,91060..91108,99728..99786))
location: region:74708-99786:-1
so has part: feature:99728-99786:-1:exon
so has part: feature:91060-91108:-1:exon
so has part: feature:90445-90496:-1:exon
so has part: feature:89148-89211:-1:exon
so has part: feature:87106-87387:-1:exon
so has part: feature:86243-86377:-1:exon
so has part: feature:85863-85985:-1:exon
so has part: feature:85227-85362:-1:exon
so has part: feature:84974-85096:-1:exon
so has part: feature:84551-84667:-1:exon
so has part: feature:84278-84352:-1:exon
so has part: feature:83797-83928:-1:exon
so has part: feature:83498-83611:-1:exon
so has part: feature:74708-82987:-1:exon

position:99786:-1
position: 99786
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:99728-99786:-1:exon

position:99728:-1
position: 99728
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:91060-91108:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:90445-90496:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:89148-89211:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:87106-87387:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:86243-86377:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:85863-85985:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:85227-85362:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:84974-85096:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:84551-84667:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:84278-84352:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:83797-83928:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:83498-83611:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:74708-82987:-1:exon

IGF2BP1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8839
gene: IGF2BP1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: insulin-like growth factor 2 mRNA-binding protein 1 isoform X2
translation: MNKLYIGNLNENVTPADLEKVFNDHKISFTGQFLVKSGYAFVDCPDEQWAMKAIETFSGKVELHGKQLEIEHSVPKKQRSRKIQIRNIPPQLRWEVLDGLLAQYGTVENCEQVNTDSETAVVNVTYANREQTRQAIMKLNGHQLENHALKVSYIPDEQSMQGPENGRRGGFGTRGAPRQGSPVTAGAPVKQQPVDIPLRLLVPTQYVGAIIGKEGATIRNITKQTQSKIDVHRKENAGAAEKAISIHSTPEGCSAACKMILEIMQKEAKDTKTADEVPLKILAHNNFVGRLIGKEGRNLKKVEQDTETKITISSLQDLTLYNPERTITVKGSIENCCKAEQEIMKKVREAYENDVAAMSLQSHLIPGLNLAAVGLFPASSNAVPPPPSSVSGAAPYSSFMPPEQETVHVFIPAQAVGAIIGKKGQHIKQLSRFASASIKAQGRIYGKLKEENFFGPKEEVKLETHIRVPASSAGRVIGKGGKTVNELQNLTAAEVVVPRDQTPDENEQVIVKIIGHFYASQMAQRKIRDILAQVKQQHQKGQSGQLQARRK
SIO_010081: IGF2BP1
subclass of: SO_0000673
so part of: IGF2BP1
location: complement(join(82895..82987,83498..83611,83797..83928,84551..84667,84974..85096,85227..85362,85863..85985,86243..86377,87106..87387,89148..89211,90445..90496,91060..91108,109570..109630,110671..110845))
location: region:82895-110845:-1
so has part: feature:110671-110845:-1:exon
so has part: feature:109570-109630:-1:exon
so has part: feature:91060-91108:-1:exon
so has part: feature:90445-90496:-1:exon
so has part: feature:89148-89211:-1:exon
so has part: feature:87106-87387:-1:exon
so has part: feature:86243-86377:-1:exon
so has part: feature:85863-85985:-1:exon
so has part: feature:85227-85362:-1:exon
so has part: feature:84974-85096:-1:exon
so has part: feature:84551-84667:-1:exon
so has part: feature:83797-83928:-1:exon
so has part: feature:83498-83611:-1:exon
so has part: feature:82895-82987:-1:exon

XP_038024536.1
type: Protein
SIO_000068: ncbiprotein

position:82895:-1
position: 82895
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:110845:-1
position: 110845
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:110671-110845:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:109570-109630:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:91060-91108:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:90445-90496:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:89148-89211:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:87106-87387:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:86243-86377:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:85863-85985:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:85227-85362:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:84974-85096:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:84551-84667:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:83797-83928:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:83498-83611:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:82895-82987:-1:exon

IGF2BP1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8839
gene: IGF2BP1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: insulin-like growth factor 2 mRNA-binding protein 1 isoform X1
translation: MNKLYIGNLNENVTPADLEKVFNDHKISFTGQFLVKSGYAFVDCPDEQWAMKAIETFSGKVELHGKQLEIEHSVPKKQRSRKIQIRNIPPQLRWEVLDGLLAQYGTVENCEQVNTDSETAVVNVTYANREQTRQAIMKLNGHQLENHALKVSYIPDEQSMQGPENGRRGGFGTRGAPRQGSPVTAGAPVKQQPVDIPLRLLVPTQYVGAIIGKEGATIRNITKQTQSKIDVHRKENAGAAEKAISIHSTPEGCSAACKMILEIMQKEAKDTKTADEVPLKILAHNNFVGRLIGKEGRNLKKVEQDTETKITISSLQDLTLYNPERTITVKGSIENCCKAEQEIMKKVREAYENDVAAMSLQSHLIPGLNLAAVGLFPASSNAVPPPPSSVSGAAPYSSFMPPEQETVHVFIPAQAVGAIIGKKGQHIKQLSRFASASIKIAPPETPDSKVRMVIITGPPEAQFKAQGRIYGKLKEENFFGPKEEVKLETHIRVPASSAGRVIGKGGKTVNELQNLTAAEVVVPRDQTPDENEQVIVKIIGHFYASQMAQRKIRDILAQVKQQHQKGQSGQLQARRK
SIO_010081: IGF2BP1
subclass of: SO_0000673
so part of: IGF2BP1
location: complement(join(82895..82987,83498..83611,83797..83928,84278..84352,84551..84667,84974..85096,85227..85362,85863..85985,86243..86377,87106..87387,89148..89211,90445..90496,91060..91108,109570..109630,110671..110845))
location: region:82895-110845:-1
so has part: feature:110671-110845:-1:exon
so has part: feature:109570-109630:-1:exon
so has part: feature:91060-91108:-1:exon
so has part: feature:90445-90496:-1:exon
so has part: feature:89148-89211:-1:exon
so has part: feature:87106-87387:-1:exon
so has part: feature:86243-86377:-1:exon
so has part: feature:85863-85985:-1:exon
so has part: feature:85227-85362:-1:exon
so has part: feature:84974-85096:-1:exon
so has part: feature:84551-84667:-1:exon
so has part: feature:84278-84352:-1:exon
so has part: feature:83797-83928:-1:exon
so has part: feature:83498-83611:-1:exon
so has part: feature:82895-82987:-1:exon

XP_027301270.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:110671-110845:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:109570-109630:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:91060-91108:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:90445-90496:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:89148-89211:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:87106-87387:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:86243-86377:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:85863-85985:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:85227-85362:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:84974-85096:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:84551-84667:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:84278-84352:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:83797-83928:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:83498-83611:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:82895-82987:-1:exon

IGF2BP1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8839
gene: IGF2BP1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: insulin-like growth factor 2 mRNA-binding protein 1 isoform X3
translation: MATSMQTLWVTLASLSRKIQIRNIPPQLRWEVLDGLLAQYGTVENCEQVNTDSETAVVNVTYANREQTRQAIMKLNGHQLENHALKVSYIPDEQSMQGPENGRRGGFGTRGAPRQGSPVTAGAPVKQQPVDIPLRLLVPTQYVGAIIGKEGATIRNITKQTQSKIDVHRKENAGAAEKAISIHSTPEGCSAACKMILEIMQKEAKDTKTADEVPLKILAHNNFVGRLIGKEGRNLKKVEQDTETKITISSLQDLTLYNPERTITVKGSIENCCKAEQEIMKKVREAYENDVAAMSLQSHLIPGLNLAAVGLFPASSNAVPPPPSSVSGAAPYSSFMPPEQETVHVFIPAQAVGAIIGKKGQHIKQLSRFASASIKIAPPETPDSKVRMVIITGPPEAQFKAQGRIYGKLKEENFFGPKEEVKLETHIRVPASSAGRVIGKGGKTVNELQNLTAAEVVVPRDQTPDENEQVIVKIIGHFYASQMAQRKIRDILAQVKQQHQKGQSGQLQARRK
SIO_010081: IGF2BP1
subclass of: SO_0000673
so part of: IGF2BP1
location: complement(join(82895..82987,83498..83611,83797..83928,84278..84352,84551..84667,84974..85096,85227..85362,85863..85985,86243..86377,87106..87387,89148..89211,90445..90496,91060..91108,99728..99771))
location: region:82895-99771:-1
so has part: feature:99728-99771:-1:exon
so has part: feature:91060-91108:-1:exon
so has part: feature:90445-90496:-1:exon
so has part: feature:89148-89211:-1:exon
so has part: feature:87106-87387:-1:exon
so has part: feature:86243-86377:-1:exon
so has part: feature:85863-85985:-1:exon
so has part: feature:85227-85362:-1:exon
so has part: feature:84974-85096:-1:exon
so has part: feature:84551-84667:-1:exon
so has part: feature:84278-84352:-1:exon
so has part: feature:83797-83928:-1:exon
so has part: feature:83498-83611:-1:exon
so has part: feature:82895-82987:-1:exon

XP_038024537.1
type: Protein
SIO_000068: ncbiprotein

position:99771:-1
position: 99771
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:99728-99771:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:91060-91108:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:90445-90496:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:89148-89211:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:87106-87387:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:86243-86377:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:85863-85985:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:85227-85362:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:84974-85096:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:84551-84667:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:84278-84352:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:83797-83928:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:83498-83611:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:82895-82987:-1:exon

LOC119714045
type: Gene
subclass of: SO_0000704
RO_0002162: 8839
gene: LOC119714045
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(119649..125460)
location: region:119649-125460:-1
so has part: feature:119649-125460:-1:exon
subclass of: SO_0000011

119714045
type: Gene
SIO_000068: ncbigene

position:119649:-1
position: 119649
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:125460:-1
position: 125460
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:119649-125460:-1:exon

LOC119714045
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 8839
nc RNA class: lncRNA
gene: LOC119714045
product: uncharacterized LOC119714045
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 16 samples with support for all annotated introns
transcript id: XR_005261190.1
SIO_010081: LOC119714045
subclass of: SO_0000673
so part of: LOC119714045
location: complement(join(119649..125198,125321..125460))
location: region:119649-125460:-1
so has part: feature:125321-125460:-1:exon
so has part: feature:119649-125198:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:125321-125460:-1:exon

position:125321:-1
position: 125321
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:119649-125198:-1:exon

position:125198:-1
position: 125198
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC101796187
type: Gene
subclass of: SO_0000704
RO_0002162: 8839
gene: LOC101796187
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 121314..130032
location: region:121314-130032:1
so has part: feature:121314-130032:1:exon
subclass of: SO_0000010

101796187
type: Gene
SIO_000068: ncbigene

position:121314:1
position: 121314
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:130032:1
position: 130032
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:121314-130032:1:exon

LOC101796187
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8839
gene: LOC101796187
product: gastric inhibitory polypeptide, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 21 samples with support for all annotated introns
transcript id: XM_038168610.1
SIO_010081: LOC101796187
subclass of: SO_0000673
so part of: LOC101796187
location: join(121314..122149,124171..124298,125343..125489,125820..125951,128785..128877,129683..129753,129884..130032)
location: region:121314-130032:1
so has part: feature:121314-122149:1:exon
so has part: feature:124171-124298:1:exon
so has part: feature:125343-125489:1:exon
so has part: feature:125820-125951:1:exon
so has part: feature:128785-128877:1:exon
so has part: feature:129683-129753:1:exon
so has part: feature:129884-130032:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:121314-122149:1:exon

position:122149:1
position: 122149
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:124171-124298:1:exon

position:124171:1
position: 124171
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:124298:1
position: 124298
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:125343-125489:1:exon

position:125343:1
position: 125343
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:125489:1
position: 125489
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:125820-125951:1:exon

position:125820:1
position: 125820
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:125951:1
position: 125951
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:128785-128877:1:exon

position:128785:1
position: 128785
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:128877:1
position: 128877
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:129683-129753:1:exon

position:129683:1
position: 129683
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:129753:1
position: 129753
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:129884-130032:1:exon

position:129884:1
position: 129884
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC101796187
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8839
gene: LOC101796187
product: gastric inhibitory polypeptide, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 40 samples with support for all annotated introns
transcript id: XM_005026146.5
SIO_010081: LOC101796187
subclass of: SO_0000673
so part of: LOC101796187
location: join(121319..122149,124171..124298,125343..125489,125820..125951,128785..128877,129884..130032)
location: region:121319-130032:1
so has part: feature:121319-122149:1:exon
so has part: feature:124171-124298:1:exon
so has part: feature:125343-125489:1:exon
so has part: feature:125820-125951:1:exon
so has part: feature:128785-128877:1:exon
so has part: feature:129884-130032:1:exon

position:121319:1
position: 121319
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:121319-122149:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:124171-124298:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:125343-125489:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:125820-125951:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:128785-128877:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:129884-130032:1:exon

LOC101796187
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8839
gene: LOC101796187
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: gastric inhibitory polypeptide isoform X2
translation: MMSLKVLSLLFASLSFVLMEENVSGISIRTPSARPVQKRYSEATLASDYSRTMDNMLKKNFVEWLLARREKKSDNVIETYKREAEPQVSAVNGQSLDLHNHEAKDFFAWLLKNKKNQSFTSLEGSEDLKDVLNQEFLTWLMSIDLCRPTTV
SIO_010081: LOC101796187
subclass of: SO_0000673
so part of: LOC101796187
location: join(124225..124298,125343..125489,125820..125951,128785..128877,129884..129893)
location: region:124225-129893:1
so has part: feature:124225-124298:1:exon
so has part: feature:125343-125489:1:exon
so has part: feature:125820-125951:1:exon
so has part: feature:128785-128877:1:exon
so has part: feature:129884-129893:1:exon

XP_005026203.2
type: Protein
SIO_000068: ncbiprotein

position:124225:1
position: 124225
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:129893:1
position: 129893
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:124225-124298:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:125343-125489:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:125820-125951:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:128785-128877:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:129884-129893:1:exon

LOC101796187
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8839
gene: LOC101796187
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: gastric inhibitory polypeptide isoform X1
translation: MMSLKVLSLLFASLSFVLMEENVSGISIRTPSARPVQKRYSEATLASDYSRTMDNMLKKNFVEWLLARREKKSDNVIETYKREAEPQVSAVNGQSLDLHNHEAKDFFAWLLKNKKNQSFTSLEGSEDLKDVLNQEFLTWLMSIDLCRPTCRYLLLDTY
SIO_010081: LOC101796187
subclass of: SO_0000673
so part of: LOC101796187
location: join(124225..124298,125343..125489,125820..125951,128785..128877,129683..129713)
location: region:124225-129713:1
so has part: feature:124225-124298:1:exon
so has part: feature:125343-125489:1:exon
so has part: feature:125820-125951:1:exon
so has part: feature:128785-128877:1:exon
so has part: feature:129683-129713:1:exon

XP_038024538.1
type: Protein
SIO_000068: ncbiprotein

position:129713:1
position: 129713
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:124225-124298:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:125343-125489:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:125820-125951:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:128785-128877:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:129683-129713:1:exon

LOC110353903
type: Gene
subclass of: SO_0000704
RO_0002162: 8839
gene: LOC110353903
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(126959..129890)
location: region:126959-129890:-1
so has part: feature:126959-129890:-1:exon
subclass of: SO_0000011

110353903
type: Gene
SIO_000068: ncbigene

position:126959:-1
position: 126959
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:129890:-1
position: 129890
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:126959-129890:-1:exon

LOC110353903
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 8839
nc RNA class: lncRNA
gene: LOC110353903
product: uncharacterized LOC110353903, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 96 samples with support for all annotated introns
transcript id: XR_002405105.3
SIO_010081: LOC110353903
subclass of: SO_0000673
so part of: LOC110353903
location: complement(join(126959..128900,129711..129890))
location: region:126959-129890:-1
so has part: feature:129711-129890:-1:exon
so has part: feature:126959-128900:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:129711-129890:-1:exon

position:129711:-1
position: 129711
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:126959-128900:-1:exon

position:128900:-1
position: 128900
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC110353903
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 8839
nc RNA class: lncRNA
gene: LOC110353903
product: uncharacterized LOC110353903, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 100 samples with support for all annotated introns
transcript id: XR_003492692.2
SIO_010081: LOC110353903
subclass of: SO_0000673
so part of: LOC110353903
location: complement(join(126959..129100,129711..129890))
location: region:126959-129890:-1
so has part: feature:129711-129890:-1:exon
so has part: feature:126959-129100:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:129711-129890:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:126959-129100:-1:exon

position:129100:-1
position: 129100
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

SNF8
type: Gene
subclass of: SO_0000704
RO_0002162: 8839
gene: SNF8
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 130352..135128
location: region:130352-135128:1
so has part: feature:130352-135128:1:exon
subclass of: SO_0000010

101796708
type: Gene
SIO_000068: ncbigene

position:130352:1
position: 130352
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:135128:1
position: 135128
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:130352-135128:1:exon

SNF8
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8839
gene: SNF8
product: SNF8 subunit of ESCRT-II, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 10 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 126 samples with support for all annotated introns
transcript id: XM_027445592.2
SIO_010081: SNF8
subclass of: SO_0000673
so part of: SNF8
location: join(130352..130478,130641..130691,131111..131249,131578..131682,133226..133298,133895..134036,134247..134321,134741..135128)
location: region:130352-135128:1
so has part: feature:130352-130478:1:exon
so has part: feature:130641-130691:1:exon
so has part: feature:131111-131249:1:exon
so has part: feature:131578-131682:1:exon
so has part: feature:133226-133298:1:exon
so has part: feature:133895-134036:1:exon
so has part: feature:134247-134321:1:exon
so has part: feature:134741-135128:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:130352-130478:1:exon

position:130478:1
position: 130478
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:130641-130691:1:exon

position:130641:1
position: 130641
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:130691:1
position: 130691
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:131111-131249:1:exon

position:131111:1
position: 131111
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:131249:1
position: 131249
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:131578-131682:1:exon

position:131578:1
position: 131578
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:131682:1
position: 131682
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:133226-133298:1:exon

position:133226:1
position: 133226
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:133298:1
position: 133298
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:133895-134036:1:exon

position:133895:1
position: 133895
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:134036:1
position: 134036
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:134247-134321:1:exon

position:134247:1
position: 134247
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:134321:1
position: 134321
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:134741-135128:1:exon

position:134741:1
position: 134741
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

SNF8
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8839
gene: SNF8
product: SNF8 subunit of ESCRT-II, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 34 samples with support for all annotated introns
transcript id: XM_027445594.2
SIO_010081: SNF8
subclass of: SO_0000673
so part of: SNF8
location: join(130401..130478,130641..130691,131578..131682,133226..133298,133895..134036,134247..134321,134741..135128)
location: region:130401-135128:1
so has part: feature:130401-130478:1:exon
so has part: feature:130641-130691:1:exon
so has part: feature:131578-131682:1:exon
so has part: feature:133226-133298:1:exon
so has part: feature:133895-134036:1:exon
so has part: feature:134247-134321:1:exon
so has part: feature:134741-135128:1:exon

position:130401:1
position: 130401
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:130401-130478:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:130641-130691:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:131578-131682:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:133226-133298:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:133895-134036:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:134247-134321:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:134741-135128:1:exon

SNF8
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8839
gene: SNF8
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: vacuolar-sorting protein SNF8 isoform X1
translation: MHRRGVGAGAVAKKKLAEAKYKERGTVLAEDQLAQMSKQLDMFKTNLEEFASKHKQEIRKSPAFRVQFQDMCATIGVDPLASGKGFWSEMLGVGDFYYELGVQIIEVCLALKHRNGGLITLEELHQQVLKGRGKFAQEVSQDDLLRAIKKLKVLGNGFGIIPVGGTYLVQSVPAELNMDHTVVLQLAEKKGYVTVSEIRSSLKWEMERAKQILEHLLKEGMAWLDTQAAGEPQYWLPALFTELYSQEITPEEAKEAIP
SIO_010081: SNF8
subclass of: SO_0000673
so part of: SNF8
location: join(130425..130478,130641..130691,131111..131249,131578..131682,133226..133298,133895..134036,134247..134321,134741..134878)
location: region:130425-134878:1
so has part: feature:130425-130478:1:exon
so has part: feature:130641-130691:1:exon
so has part: feature:131111-131249:1:exon
so has part: feature:131578-131682:1:exon
so has part: feature:133226-133298:1:exon
so has part: feature:133895-134036:1:exon
so has part: feature:134247-134321:1:exon
so has part: feature:134741-134878:1:exon

XP_027301393.1
type: Protein
SIO_000068: ncbiprotein

position:130425:1
position: 130425
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:134878:1
position: 134878
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:130425-130478:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:130641-130691:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:131111-131249:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:131578-131682:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:133226-133298:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:133895-134036:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:134247-134321:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:134741-134878:1:exon

SNF8
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8839
gene: SNF8
product: SNF8 subunit of ESCRT-II, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 106 samples with support for all annotated introns
transcript id: XM_027445593.2
SIO_010081: SNF8
subclass of: SO_0000673
so part of: SNF8
location: join(130706..130888,131111..131249,131578..131682,133226..133298,133895..134036,134247..134321,134741..135128)
location: region:130706-135128:1
so has part: feature:130706-130888:1:exon
so has part: feature:131111-131249:1:exon
so has part: feature:131578-131682:1:exon
so has part: feature:133226-133298:1:exon
so has part: feature:133895-134036:1:exon
so has part: feature:134247-134321:1:exon
so has part: feature:134741-135128:1:exon

position:130706:1
position: 130706
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:130706-130888:1:exon

position:130888:1
position: 130888
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:131111-131249:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:131578-131682:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:133226-133298:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:133895-134036:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:134247-134321:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:134741-135128:1:exon

SNF8
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8839
gene: SNF8
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: vacuolar-sorting protein SNF8 isoform X2
translation: MSKQLDMFKTNLEEFASKHKQEIRKSPAFRVQFQDMCATIGVDPLASGKGFWSEMLGVGDFYYELGVQIIEVCLALKHRNGGLITLEELHQQVLKGRGKFAQEVSQDDLLRAIKKLKVLGNGFGIIPVGGTYLVQSVPAELNMDHTVVLQLAEKKGYVTVSEIRSSLKWEMERAKQILEHLLKEGMAWLDTQAAGEPQYWLPALFTELYSQEITPEEAKEAIP
SIO_010081: SNF8
subclass of: SO_0000673
so part of: SNF8
location: join(131111..131249,131578..131682,133226..133298,133895..134036,134247..134321,134741..134878)
location: region:131111-134878:1
so has part: feature:131111-131249:1:exon
so has part: feature:131578-131682:1:exon
so has part: feature:133226-133298:1:exon
so has part: feature:133895-134036:1:exon
so has part: feature:134247-134321:1:exon
so has part: feature:134741-134878:1:exon

XP_027301394.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:131111-131249:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:131578-131682:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:133226-133298:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:133895-134036:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:134247-134321:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:134741-134878:1:exon

SNF8
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8839
gene: SNF8
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: vacuolar-sorting protein SNF8 isoform X3
translation: MLGVGDFYYELGVQIIEVCLALKHRNGGLITLEELHQQVLKGRGKFAQEVSQDDLLRAIKKLKVLGNGFGIIPVGGTYLVQSVPAELNMDHTVVLQLAEKKGYVTVSEIRSSLKWEMERAKQILEHLLKEGMAWLDTQAAGEPQYWLPALFTELYSQEITPEEAKEAIP
SIO_010081: SNF8
subclass of: SO_0000673
so part of: SNF8
location: join(131601..131682,133226..133298,133895..134036,134247..134321,134741..134878)
location: region:131601-134878:1
so has part: feature:131601-131682:1:exon
so has part: feature:133226-133298:1:exon
so has part: feature:133895-134036:1:exon
so has part: feature:134247-134321:1:exon
so has part: feature:134741-134878:1:exon

XP_027301395.1
type: Protein
SIO_000068: ncbiprotein

position:131601:1
position: 131601
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:131601-131682:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:133226-133298:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:133895-134036:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:134247-134321:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:134741-134878:1:exon

UBE2Z
type: Gene
subclass of: SO_0000704
RO_0002162: 8839
gene: UBE2Z
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(135268..148356)
location: region:135268-148356:-1
so has part: feature:135268-148356:-1:exon
subclass of: SO_0000010

101796390
type: Gene
SIO_000068: ncbigene

position:135268:-1
position: 135268
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:148356:-1
position: 148356
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:135268-148356:-1:exon

UBE2Z
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8839
gene: UBE2Z
product: ubiquitin conjugating enzyme E2 Z, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 112 samples with support for all annotated introns
transcript id: XM_027445541.2
SIO_010081: UBE2Z
subclass of: SO_0000673
so part of: UBE2Z
location: complement(join(135268..137791,142126..142237,144128..144315,146119..146191,147828..148356))
location: region:135268-148356:-1
so has part: feature:147828-148356:-1:exon
so has part: feature:146119-146191:-1:exon
so has part: feature:144128-144315:-1:exon
so has part: feature:142126-142237:-1:exon
so has part: feature:135268-137791:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:147828-148356:-1:exon

position:147828:-1
position: 147828
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:146119-146191:-1:exon

position:146119:-1
position: 146119
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:146191:-1
position: 146191
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:144128-144315:-1:exon

position:144128:-1
position: 144128
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:144315:-1
position: 144315
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:142126-142237:-1:exon

position:142126:-1
position: 142126
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:142237:-1
position: 142237
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:135268-137791:-1:exon

position:137791:-1
position: 137791
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

UBE2Z
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8839
gene: UBE2Z
product: ubiquitin conjugating enzyme E2 Z, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 126 samples with support for all annotated introns
transcript id: XM_027445540.2
SIO_010081: UBE2Z
subclass of: SO_0000673
so part of: UBE2Z
location: complement(join(135268..137791,140788..140878,141407..141519,142126..142237,144128..144315,146119..146191,147828..148352))
location: region:135268-148352:-1
so has part: feature:147828-148352:-1:exon
so has part: feature:146119-146191:-1:exon
so has part: feature:144128-144315:-1:exon
so has part: feature:142126-142237:-1:exon
so has part: feature:141407-141519:-1:exon
so has part: feature:140788-140878:-1:exon
so has part: feature:135268-137791:-1:exon

position:148352:-1
position: 148352
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:147828-148352:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:146119-146191:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:144128-144315:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:142126-142237:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:141407-141519:-1:exon

position:141407:-1
position: 141407
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:141519:-1
position: 141519
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:140788-140878:-1:exon

position:140788:-1
position: 140788
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:140878:-1
position: 140878
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:135268-137791:-1:exon

UBE2Z
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8839
gene: UBE2Z
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: ubiquitin-conjugating enzyme E2 Z isoform X2
translation: MAESPAAEEAAPAPAAVLAAGGGGGASAGPGGSAGSPGVFIPAELWAAAGFGAAPASAGVAPGSGGAPIAAAAAAAGAALLTHSAFWDPTVSGDWDSERPSPACLLRIKRDIMSIYKEPPPGMFVVPDPHDMTKIHALITGPFDTPYEGGFFLFLFRCPPDYPIHPPRVKLMTTGNNTVRFNPNFYRNGKVCLSILGTWTGPAWSPAQSISSVLISIQSLMTENPYHNEPGFEQDPFGEKRGHFDYQSLLVRLQGIRQKVQEKHQQANTEIDSESSSSETETDAQSCSKA
SIO_010081: UBE2Z
subclass of: SO_0000673
so part of: UBE2Z
location: complement(join(137621..137791,142126..142237,144128..144315,146119..146191,147828..148156))
location: region:137621-148156:-1
so has part: feature:147828-148156:-1:exon
so has part: feature:146119-146191:-1:exon
so has part: feature:144128-144315:-1:exon
so has part: feature:142126-142237:-1:exon
so has part: feature:137621-137791:-1:exon

XP_027301342.1
type: Protein
SIO_000068: ncbiprotein

position:137621:-1
position: 137621
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:148156:-1
position: 148156
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:147828-148156:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:146119-146191:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:144128-144315:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:142126-142237:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:137621-137791:-1:exon

UBE2Z
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8839
gene: UBE2Z
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: ubiquitin-conjugating enzyme E2 Z isoform X1
translation: MAESPAAEEAAPAPAAVLAAGGGGGASAGPGGSAGSPGVFIPAELWAAAGFGAAPASAGVAPGSGGAPIAAAAAAAGAALLTHSAFWDPTVSGDWDSERPSPACLLRIKRDIMSIYKEPPPGMFVVPDPHDMTKIHALITGPFDTPYEGGFFLFLFRCPPDYPIHPPRVKLMTTGNNTVRFNPNFYRNGKVCLSILGTWTGPAWSPAQSISSVLISIQSLMTENPYHNEPGFEQERHPGDSKNYNECIRHETIRVAVCDMLEGKCPCPEPLRGVMEKSFMEYYDFYEGVCKERLYLQGQTMQDPFGEKRGHFDYQSLLVRLQGIRQKVQEKHQQANTEIDSESSSSETETDAQSCSKA
SIO_010081: UBE2Z
subclass of: SO_0000673
so part of: UBE2Z
location: complement(join(137621..137791,140788..140878,141407..141519,142126..142237,144128..144315,146119..146191,147828..148156))
location: region:137621-148156:-1
so has part: feature:147828-148156:-1:exon
so has part: feature:146119-146191:-1:exon
so has part: feature:144128-144315:-1:exon
so has part: feature:142126-142237:-1:exon
so has part: feature:141407-141519:-1:exon
so has part: feature:140788-140878:-1:exon
so has part: feature:137621-137791:-1:exon

XP_027301341.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:147828-148156:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:146119-146191:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:144128-144315:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:142126-142237:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:141407-141519:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:140788-140878:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:137621-137791:-1:exon

ATP5MC1
type: Gene
subclass of: SO_0000704
RO_0002162: 8839
gene: ATP5MC1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(149711..151986)
location: region:149711-151986:-1
so has part: feature:149711-151986:-1:exon
subclass of: SO_0000010

101797010
type: Gene
SIO_000068: ncbigene

position:149711:-1
position: 149711
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:151986:-1
position: 151986
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:149711-151986:-1:exon

ATP5MC1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8839
gene: ATP5MC1
product: ATP synthase membrane subunit c locus 1, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 9 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 126 samples with support for all annotated introns
transcript id: XM_027445599.2
SIO_010081: ATP5MC1
subclass of: SO_0000673
so part of: ATP5MC1
location: complement(join(149711..149947,150269..150444,150721..150798,151438..151486,151580..151986))
location: region:149711-151986:-1
so has part: feature:151580-151986:-1:exon
so has part: feature:151438-151486:-1:exon
so has part: feature:150721-150798:-1:exon
so has part: feature:150269-150444:-1:exon
so has part: feature:149711-149947:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:151580-151986:-1:exon

position:151580:-1
position: 151580
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:151438-151486:-1:exon

position:151438:-1
position: 151438
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:151486:-1
position: 151486
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:150721-150798:-1:exon

position:150721:-1
position: 150721
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:150798:-1
position: 150798
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:150269-150444:-1:exon

position:150269:-1
position: 150269
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:150444:-1
position: 150444
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:149711-149947:-1:exon

position:149947:-1
position: 149947
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

ATP5MC1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8839
gene: ATP5MC1
product: ATP synthase membrane subunit c locus 1, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 9 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 126 samples with support for all annotated introns
transcript id: XM_027445600.2
SIO_010081: ATP5MC1
subclass of: SO_0000673
so part of: ATP5MC1
location: complement(join(149711..149947,150269..150444,150721..150798,151438..151486,151638..151796))
location: region:149711-151796:-1
so has part: feature:151638-151796:-1:exon
so has part: feature:151438-151486:-1:exon
so has part: feature:150721-150798:-1:exon
so has part: feature:150269-150444:-1:exon
so has part: feature:149711-149947:-1:exon

position:151796:-1
position: 151796
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:151638-151796:-1:exon

position:151638:-1
position: 151638
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:151438-151486:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:150721-150798:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:150269-150444:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:149711-149947:-1:exon

ATP5MC1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8839
gene: ATP5MC1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: ATP synthase F(0) complex subunit C1, mitochondrial isoform X1
translation: MSFWERVLHAASQSESAQREQLTNGDPRSHTALPPCPAIPDAGGRGLARPQPMGITSRVPECRARRAATANGRGGRAGTPQGERGGGARSSHSRRQREPRRETTMQTPVALLGSPALFRCCSRALARPVPVSVFSRPEVQTVQPAGVSYPQLSRREFQTSVVSRDIDTAAKFIGAGAATVGVAGSGAGIGTVFGSLIIGYARNPSLKQQLFSYAILGFALSEAMGLFCLMVAFLILFAM
SIO_010081: ATP5MC1
subclass of: SO_0000673
so part of: ATP5MC1
location: complement(join(149833..149947,150269..150444,150721..150798,151438..151486,151580..151881))
location: region:149833-151881:-1
so has part: feature:151580-151881:-1:exon
so has part: feature:151438-151486:-1:exon
so has part: feature:150721-150798:-1:exon
so has part: feature:150269-150444:-1:exon
so has part: feature:149833-149947:-1:exon

XP_027301400.1
type: Protein
SIO_000068: ncbiprotein

position:149833:-1
position: 149833
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:151881:-1
position: 151881
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:151580-151881:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:151438-151486:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:150721-150798:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:150269-150444:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:149833-149947:-1:exon

ATP5MC1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8839
gene: ATP5MC1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: ATP synthase F(0) complex subunit C1, mitochondrial isoform X2
translation: MPRAARGDSQWAWRTRWDTARETTMQTPVALLGSPALFRCCSRALARPVPVSVFSRPEVQTVQPAGVSYPQLSRREFQTSVVSRDIDTAAKFIGAGAATVGVAGSGAGIGTVFGSLIIGYARNPSLKQQLFSYAILGFALSEAMGLFCLMVAFLILFAM
SIO_010081: ATP5MC1
subclass of: SO_0000673
so part of: ATP5MC1
location: complement(join(149833..149947,150269..150444,150721..150798,151438..151486,151638..151699))
location: region:149833-151699:-1
so has part: feature:151638-151699:-1:exon
so has part: feature:151438-151486:-1:exon
so has part: feature:150721-150798:-1:exon
so has part: feature:150269-150444:-1:exon
so has part: feature:149833-149947:-1:exon

XP_027301401.1
type: Protein
SIO_000068: ncbiprotein

position:151699:-1
position: 151699
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:151638-151699:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:151438-151486:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:150721-150798:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:150269-150444:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:149833-149947:-1:exon

CALCOCO2
type: Gene
subclass of: SO_0000704
RO_0002162: 8839
gene: CALCOCO2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 152160..164277
location: region:152160-164277:1
so has part: feature:152160-164277:1:exon
subclass of: SO_0000010

101797184
type: Gene
SIO_000068: ncbigene

position:152160:1
position: 152160
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:164277:1
position: 164277
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:152160-164277:1:exon

CALCOCO2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8839
gene: CALCOCO2
product: calcium binding and coiled-coil domain 2, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 125 samples with support for all annotated introns
transcript id: XM_027445492.2
SIO_010081: CALCOCO2
subclass of: SO_0000673
so part of: CALCOCO2
location: join(152160..152308,155059..155247,155768..155870,156236..156369,157011..157136,157628..157755,157866..157956,158734..158856,159590..159676,160724..160819,161517..161658,162056..162093,162631..164277)
location: region:152160-164277:1
so has part: feature:152160-152308:1:exon
so has part: feature:155059-155247:1:exon
so has part: feature:155768-155870:1:exon
so has part: feature:156236-156369:1:exon
so has part: feature:157011-157136:1:exon
so has part: feature:157628-157755:1:exon
so has part: feature:157866-157956:1:exon
so has part: feature:158734-158856:1:exon
so has part: feature:159590-159676:1:exon
so has part: feature:160724-160819:1:exon
so has part: feature:161517-161658:1:exon
so has part: feature:162056-162093:1:exon
so has part: feature:162631-164277:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:152160-152308:1:exon

position:152308:1
position: 152308
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:155059-155247:1:exon

position:155059:1
position: 155059
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:155247:1
position: 155247
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:155768-155870:1:exon

position:155768:1
position: 155768
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:155870:1
position: 155870
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:156236-156369:1:exon

position:156236:1
position: 156236
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:156369:1
position: 156369
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:157011-157136:1:exon

position:157011:1
position: 157011
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:157136:1
position: 157136
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:157628-157755:1:exon

position:157628:1
position: 157628
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:157755:1
position: 157755
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:157866-157956:1:exon

position:157866:1
position: 157866
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:157956:1
position: 157956
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:158734-158856:1:exon

position:158734:1
position: 158734
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:158856:1
position: 158856
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:159590-159676:1:exon

position:159590:1
position: 159590
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:159676:1
position: 159676
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:160724-160819:1:exon

position:160724:1
position: 160724
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:160819:1
position: 160819
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:161517-161658:1:exon

position:161517:1
position: 161517
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:161658:1
position: 161658
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:162056-162093:1:exon

position:162056:1
position: 162056
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:162093:1
position: 162093
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:162631-164277:1:exon

position:162631:1
position: 162631
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

CALCOCO2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8839
gene: CALCOCO2
product: calcium binding and coiled-coil domain 2, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 74 samples with support for all annotated introns
transcript id: XM_027445493.2
SIO_010081: CALCOCO2
subclass of: SO_0000673
so part of: CALCOCO2
location: join(152410..152737,155059..155247,155768..155870,156236..156369,157011..157136,157628..157755,157866..157956,158734..158856,159590..159676,160724..160819,161517..161658,162056..162093,162631..164277)
location: region:152410-164277:1
so has part: feature:152410-152737:1:exon
so has part: feature:155059-155247:1:exon
so has part: feature:155768-155870:1:exon
so has part: feature:156236-156369:1:exon
so has part: feature:157011-157136:1:exon
so has part: feature:157628-157755:1:exon
so has part: feature:157866-157956:1:exon
so has part: feature:158734-158856:1:exon
so has part: feature:159590-159676:1:exon
so has part: feature:160724-160819:1:exon
so has part: feature:161517-161658:1:exon
so has part: feature:162056-162093:1:exon
so has part: feature:162631-164277:1:exon

position:152410:1
position: 152410
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:152410-152737:1:exon

position:152737:1
position: 152737
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:155059-155247:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:155768-155870:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:156236-156369:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:157011-157136:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:157628-157755:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:157866-157956:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:158734-158856:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:159590-159676:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:160724-160819:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:161517-161658:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:162056-162093:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:162631-164277:1:exon

CALCOCO2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8839
gene: CALCOCO2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: calcium-binding and coiled-coil domain-containing protein 2
translation: MMDETSDEPPTSAVLLDNCHFSQVIFNNVEKFYVPGGDVICYYTLTHNIVPRGKDWVGIFRVGWKTTREYYTFMWAPLPSDVHGDTAVQQQIQFKAYYLPKDDEYYQFCYIDQDGMVRGASVPFQFRAETEDDILVVTTQGEVEEIELQNKNLLKENEELQATCASLQKQNTELQEELKKTQKLQNGLESLRSSTEKLELELNSLKKENKHLKELDECREAELHQFKEQIQNVTSEKVNLETRLKTALDHMDQLQSQVLNYEKDMDNLVRMDHDKTEQLESLKEENRQLRMTVTQQKEQKKELEHRLENLKGTEANLSLRLQNEQQQNRDLMKELEEQRRLFQMLQAKKNESDEEKQKLREENDTLLRHLSQTRDVSSFSAASQAQAPVSAPEGGCLVFGNPYYAAEANLESKAARTDSIRKCPMCDDIFPEDIEASDYEAHVHSHLLECPLCNETFEKSNQQVFDDHIFCHDLE
SIO_010081: CALCOCO2
subclass of: SO_0000673
so part of: CALCOCO2
location: join(155065..155247,155768..155870,156236..156369,157011..157136,157628..157755,157866..157956,158734..158856,159590..159676,160724..160819,161517..161658,162056..162093,162631..162807)
location: region:155065-162807:1
so has part: feature:155065-155247:1:exon
so has part: feature:155768-155870:1:exon
so has part: feature:156236-156369:1:exon
so has part: feature:157011-157136:1:exon
so has part: feature:157628-157755:1:exon
so has part: feature:157866-157956:1:exon
so has part: feature:158734-158856:1:exon
so has part: feature:159590-159676:1:exon
so has part: feature:160724-160819:1:exon
so has part: feature:161517-161658:1:exon
so has part: feature:162056-162093:1:exon
so has part: feature:162631-162807:1:exon

XP_027301293.1
type: Protein
SIO_000068: ncbiprotein

position:155065:1
position: 155065
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:162807:1
position: 162807
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:155065-155247:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:155768-155870:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:156236-156369:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:157011-157136:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:157628-157755:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:157866-157956:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:158734-158856:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:159590-159676:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:160724-160819:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:161517-161658:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:162056-162093:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:162631-162807:1:exon

CALCOCO2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8839
gene: CALCOCO2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: calcium-binding and coiled-coil domain-containing protein 2
translation: MMDETSDEPPTSAVLLDNCHFSQVIFNNVEKFYVPGGDVICYYTLTHNIVPRGKDWVGIFRVGWKTTREYYTFMWAPLPSDVHGDTAVQQQIQFKAYYLPKDDEYYQFCYIDQDGMVRGASVPFQFRAETEDDILVVTTQGEVEEIELQNKNLLKENEELQATCASLQKQNTELQEELKKTQKLQNGLESLRSSTEKLELELNSLKKENKHLKELDECREAELHQFKEQIQNVTSEKVNLETRLKTALDHMDQLQSQVLNYEKDMDNLVRMDHDKTEQLESLKEENRQLRMTVTQQKEQKKELEHRLENLKGTEANLSLRLQNEQQQNRDLMKELEEQRRLFQMLQAKKNESDEEKQKLREENDTLLRHLSQTRDVSSFSAASQAQAPVSAPEGGCLVFGNPYYAAEANLESKAARTDSIRKCPMCDDIFPEDIEASDYEAHVHSHLLECPLCNETFEKSNQQVFDDHIFCHDLE
SIO_010081: CALCOCO2
subclass of: SO_0000673
so part of: CALCOCO2
location: join(155065..155247,155768..155870,156236..156369,157011..157136,157628..157755,157866..157956,158734..158856,159590..159676,160724..160819,161517..161658,162056..162093,162631..162807)
location: region:155065-162807:1
so has part: feature:155065-155247:1:exon
so has part: feature:155768-155870:1:exon
so has part: feature:156236-156369:1:exon
so has part: feature:157011-157136:1:exon
so has part: feature:157628-157755:1:exon
so has part: feature:157866-157956:1:exon
so has part: feature:158734-158856:1:exon
so has part: feature:159590-159676:1:exon
so has part: feature:160724-160819:1:exon
so has part: feature:161517-161658:1:exon
so has part: feature:162056-162093:1:exon
so has part: feature:162631-162807:1:exon

XP_027301294.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:155065-155247:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:155768-155870:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:156236-156369:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:157011-157136:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:157628-157755:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:157866-157956:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:158734-158856:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:159590-159676:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:160724-160819:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:161517-161658:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:162056-162093:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:162631-162807:1:exon

LOC119714067
type: Gene
subclass of: SO_0000704
RO_0002162: 8839
gene: LOC119714067
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(163689..170931)
location: region:163689-170931:-1
so has part: feature:163689-170931:-1:exon
subclass of: SO_0000011

119714067
type: Gene
SIO_000068: ncbigene

position:163689:-1
position: 163689
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:170931:-1
position: 170931
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:163689-170931:-1:exon

LOC119714067
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 8839
nc RNA class: lncRNA
gene: LOC119714067
product: uncharacterized LOC119714067
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 48 samples with support for all annotated introns
transcript id: XR_005261231.1
SIO_010081: LOC119714067
subclass of: SO_0000673
so part of: LOC119714067
location: complement(join(163689..166654,170441..170931))
location: region:163689-170931:-1
so has part: feature:170441-170931:-1:exon
so has part: feature:163689-166654:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:170441-170931:-1:exon

position:170441:-1
position: 170441
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:163689-166654:-1:exon

position:166654:-1
position: 166654
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC119714109
type: Gene
subclass of: SO_0000704
RO_0002162: 8839
gene: LOC119714109
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(188139..190823)
location: region:188139-190823:-1
so has part: feature:188139-190823:-1:exon
subclass of: SO_0000011

119714109
type: Gene
SIO_000068: ncbigene

position:188139:-1
position: 188139
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:190823:-1
position: 190823
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:188139-190823:-1:exon

LOC119714109
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 8839
nc RNA class: lncRNA
gene: LOC119714109
product: uncharacterized LOC119714109
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 7 samples with support for all annotated introns
transcript id: XR_005261263.1
SIO_010081: LOC119714109
subclass of: SO_0000673
so part of: LOC119714109
location: complement(join(188139..189110,190675..190823))
location: region:188139-190823:-1
so has part: feature:190675-190823:-1:exon
so has part: feature:188139-189110:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:190675-190823:-1:exon

position:190675:-1
position: 190675
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:188139-189110:-1:exon

position:189110:-1
position: 189110
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

HOXB13
type: Gene
subclass of: SO_0000704
RO_0002162: 8839
gene: HOXB13
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 196021..198370
location: region:196021-198370:1
so has part: feature:196021-198370:1:exon
subclass of: SO_0000010

101800514
type: Gene
SIO_000068: ncbigene

position:196021:1
position: 196021
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:198370:1
position: 198370
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:196021-198370:1:exon

HOXB13
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8839
gene: HOXB13
product: homeobox B13
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 16 Proteins, and 98% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_027445837.2
SIO_010081: HOXB13
subclass of: SO_0000673
so part of: HOXB13
location: join(196021..196730,197516..198370)
location: region:196021-198370:1
so has part: feature:196021-196730:1:exon
so has part: feature:197516-198370:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:196021-196730:1:exon

position:196730:1
position: 196730
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:197516-198370:1:exon

position:197516:1
position: 197516
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

HOXB13
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8839
gene: HOXB13
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: homeobox protein Hox-B13
translation: MQPPEPRAPSGLEGLLAAGGFAGGQGRGLPPAPALGGPSPPPGMNPSYPAEEPAKPCLAAPPGPTAPPGPAASAPLPYGYFGSGYYSCRVARSALKTGPAQGPFPPEKYLDPPAGSEDFQSRPAEFAFYPSYGAPYQPVAGYLDVSVVPGLGGPGEARHETLLPVDGYHQPWALGGSWSGQMCCPKEQGQAGYLLKSAFADATTQLPSDGCSFRRGRKKRVPYSKGQLKELEKEYASSKFITRDKRRKIAAATNLTERQITIWFQNRRVKEKKVVAKIKSSSTP
SIO_010081: HOXB13
subclass of: SO_0000673
so part of: HOXB13
location: join(196130..196730,197516..197769)
location: region:196130-197769:1
so has part: feature:196130-196730:1:exon
so has part: feature:197516-197769:1:exon

XP_027301638.2
type: Protein
SIO_000068: ncbiprotein

position:196130:1
position: 196130
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:197769:1
position: 197769
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:196130-196730:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:197516-197769:1:exon

LOC119714004
type: Gene
subclass of: SO_0000704
RO_0002162: 8839
gene: LOC119714004
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(207689..241060)
location: region:207689-241060:-1
so has part: feature:207689-241060:-1:exon
subclass of: SO_0000011

119714004
type: Gene
SIO_000068: ncbigene

position:207689:-1
position: 207689
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:241060:-1
position: 241060
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:207689-241060:-1:exon

LOC119714004
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 8839
nc RNA class: lncRNA
gene: LOC119714004
product: uncharacterized LOC119714004, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
transcript id: XR_005261174.1
SIO_010081: LOC119714004
subclass of: SO_0000673
so part of: LOC119714004
location: complement(join(207689..209882,210130..214466,225526..225627,226825..226891,236705..236813,240924..241060))
location: region:207689-241060:-1
so has part: feature:240924-241060:-1:exon
so has part: feature:236705-236813:-1:exon
so has part: feature:226825-226891:-1:exon
so has part: feature:225526-225627:-1:exon
so has part: feature:210130-214466:-1:exon
so has part: feature:207689-209882:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:240924-241060:-1:exon

position:240924:-1
position: 240924
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:236705-236813:-1:exon

position:236705:-1
position: 236705
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:236813:-1
position: 236813
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:226825-226891:-1:exon

position:226825:-1
position: 226825
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:226891:-1
position: 226891
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:225526-225627:-1:exon

position:225526:-1
position: 225526
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:225627:-1
position: 225627
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:210130-214466:-1:exon

position:210130:-1
position: 210130
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:214466:-1
position: 214466
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:207689-209882:-1:exon

position:209882:-1
position: 209882
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC119714004
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 8839
nc RNA class: lncRNA
gene: LOC119714004
product: uncharacterized LOC119714004, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 6 samples with support for all annotated introns
transcript id: XR_005261173.1
SIO_010081: LOC119714004
subclass of: SO_0000673
so part of: LOC119714004
location: complement(join(207689..209882,210130..214466,225526..225630,226825..226891,236705..236813,240924..241060))
location: region:207689-241060:-1
so has part: feature:240924-241060:-1:exon
so has part: feature:236705-236813:-1:exon
so has part: feature:226825-226891:-1:exon
so has part: feature:225526-225630:-1:exon
so has part: feature:210130-214466:-1:exon
so has part: feature:207689-209882:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:240924-241060:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:236705-236813:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:226825-226891:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:225526-225630:-1:exon

position:225630:-1
position: 225630
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:210130-214466:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:207689-209882:-1:exon

HOXB9
type: Gene
subclass of: SO_0000704
RO_0002162: 8839
gene: HOXB9
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 218102..244169
location: region:218102-244169:1
so has part: feature:218102-244169:1:exon
subclass of: SO_0000010

106019156
type: Gene
SIO_000068: ncbigene

position:218102:1
position: 218102
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:244169:1
position: 244169
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:218102-244169:1:exon

HOXB9
type: Miscellaneous RNA
subclass of: SO_0000673
RO_0002162: 8839
gene: HOXB9
product: homeobox B9, transcript variant X13
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 8 samples with support for all annotated introns
transcript id: XR_005261172.1
SIO_010081: HOXB9
so part of: HOXB9
location: join(218102..224599,225486..225785)
location: region:218102-225785:1
so has part: feature:218102-224599:1:exon
so has part: feature:225486-225785:1:exon

position:225785:1
position: 225785
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:218102-224599:1:exon

position:224599:1
position: 224599
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:225486-225785:1:exon

position:225486:1
position: 225486
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

HOXB9
type: Miscellaneous RNA
subclass of: SO_0000673
RO_0002162: 8839
gene: HOXB9
product: homeobox B9, transcript variant X5
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 8 samples with support for all annotated introns
transcript id: XR_005261165.1
SIO_010081: HOXB9
so part of: HOXB9
location: join(222202..223520,223611..223647,223797..224599,225792..225983,226626..228612)
location: region:222202-228612:1
so has part: feature:222202-223520:1:exon
so has part: feature:223611-223647:1:exon
so has part: feature:223797-224599:1:exon
so has part: feature:225792-225983:1:exon
so has part: feature:226626-228612:1:exon

position:222202:1
position: 222202
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:228612:1
position: 228612
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:222202-223520:1:exon

position:223520:1
position: 223520
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:223611-223647:1:exon

position:223611:1
position: 223611
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:223647:1
position: 223647
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:223797-224599:1:exon

position:223797:1
position: 223797
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:225792-225983:1:exon

position:225792:1
position: 225792
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:225983:1
position: 225983
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:226626-228612:1:exon

position:226626:1
position: 226626
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

HOXB9
type: Miscellaneous RNA
subclass of: SO_0000673
RO_0002162: 8839
gene: HOXB9
product: homeobox B9, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 9 samples with support for all annotated introns
transcript id: XR_005261164.1
SIO_010081: HOXB9
so part of: HOXB9
location: join(222207..223647,223797..224599,225792..225983,226626..228612)
location: region:222207-228612:1
so has part: feature:222207-223647:1:exon
so has part: feature:223797-224599:1:exon
so has part: feature:225792-225983:1:exon
so has part: feature:226626-228612:1:exon

position:222207:1
position: 222207
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:222207-223647:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:223797-224599:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:225792-225983:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:226626-228612:1:exon

HOXB9
type: Miscellaneous RNA
subclass of: SO_0000673
RO_0002162: 8839
gene: HOXB9
product: homeobox B9, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 8 samples with support for all annotated introns
transcript id: XR_001193758.3
SIO_010081: HOXB9
so part of: HOXB9
location: join(222209..223520,223797..224599,225792..225983,226626..228612)
location: region:222209-228612:1
so has part: feature:222209-223520:1:exon
so has part: feature:223797-224599:1:exon
so has part: feature:225792-225983:1:exon
so has part: feature:226626-228612:1:exon

position:222209:1
position: 222209
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:222209-223520:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:223797-224599:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:225792-225983:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:226626-228612:1:exon

HOXB9
type: Miscellaneous RNA
subclass of: SO_0000673
RO_0002162: 8839
gene: HOXB9
product: homeobox B9, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 9 samples with support for all annotated introns
transcript id: XR_005261163.1
SIO_010081: HOXB9
so part of: HOXB9
location: join(222223..224599,225792..225983,226626..230261,234279..234393,243430..243565)
location: region:222223-243565:1
so has part: feature:222223-224599:1:exon
so has part: feature:225792-225983:1:exon
so has part: feature:226626-230261:1:exon
so has part: feature:234279-234393:1:exon
so has part: feature:243430-243565:1:exon

position:222223:1
position: 222223
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:243565:1
position: 243565
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:222223-224599:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:225792-225983:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:226626-230261:1:exon

position:230261:1
position: 230261
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:234279-234393:1:exon

position:234279:1
position: 234279
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:234393:1
position: 234393
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:243430-243565:1:exon

position:243430:1
position: 243430
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

HOXB9
type: Miscellaneous RNA
subclass of: SO_0000673
RO_0002162: 8839
gene: HOXB9
product: homeobox B9, transcript variant X6
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
transcript id: XR_005261166.1
SIO_010081: HOXB9
so part of: HOXB9
location: join(222223..224599,225792..225983,226626..230261,234279..234393,236039..236680)
location: region:222223-236680:1
so has part: feature:222223-224599:1:exon
so has part: feature:225792-225983:1:exon
so has part: feature:226626-230261:1:exon
so has part: feature:234279-234393:1:exon
so has part: feature:236039-236680:1:exon

position:236680:1
position: 236680
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:222223-224599:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:225792-225983:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:226626-230261:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:234279-234393:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:236039-236680:1:exon

position:236039:1
position: 236039
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

HOXB9
type: Miscellaneous RNA
subclass of: SO_0000673
RO_0002162: 8839
gene: HOXB9
product: homeobox B9, transcript variant X11
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 8 samples with support for all annotated introns
transcript id: XR_005261170.1
SIO_010081: HOXB9
so part of: HOXB9
location: join(223277..223926,224373..224599,225792..225983,226626..228612)
location: region:223277-228612:1
so has part: feature:223277-223926:1:exon
so has part: feature:224373-224599:1:exon
so has part: feature:225792-225983:1:exon
so has part: feature:226626-228612:1:exon

position:223277:1
position: 223277
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:223277-223926:1:exon

position:223926:1
position: 223926
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:224373-224599:1:exon

position:224373:1
position: 224373
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:225792-225983:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:226626-228612:1:exon

HOXB9
type: Miscellaneous RNA
subclass of: SO_0000673
RO_0002162: 8839
gene: HOXB9
product: homeobox B9, transcript variant X9
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 6 samples with support for all annotated introns
transcript id: XR_005261168.1
SIO_010081: HOXB9
so part of: HOXB9
location: join(223278..224079,224366..224599,225792..225983,226626..228612)
location: region:223278-228612:1
so has part: feature:223278-224079:1:exon
so has part: feature:224366-224599:1:exon
so has part: feature:225792-225983:1:exon
so has part: feature:226626-228612:1:exon

position:223278:1
position: 223278
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:223278-224079:1:exon

position:224079:1
position: 224079
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:224366-224599:1:exon

position:224366:1
position: 224366
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:225792-225983:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:226626-228612:1:exon

HOXB9
type: Miscellaneous RNA
subclass of: SO_0000673
RO_0002162: 8839
gene: HOXB9
product: homeobox B9, transcript variant X8
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 12 samples with support for all annotated introns
transcript id: XR_005261167.1
SIO_010081: HOXB9
so part of: HOXB9
location: join(223279..224272,224366..224599,225792..225983,226626..228612)
location: region:223279-228612:1
so has part: feature:223279-224272:1:exon
so has part: feature:224366-224599:1:exon
so has part: feature:225792-225983:1:exon
so has part: feature:226626-228612:1:exon

position:223279:1
position: 223279
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:223279-224272:1:exon

position:224272:1
position: 224272
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:224366-224599:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:225792-225983:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:226626-228612:1:exon

HOXB9
type: Miscellaneous RNA
subclass of: SO_0000673
RO_0002162: 8839
gene: HOXB9
product: homeobox B9, transcript variant X10
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 7 samples with support for all annotated introns
transcript id: XR_005261169.1
SIO_010081: HOXB9
so part of: HOXB9
location: join(223279..224079,224373..224599,225792..225983,226626..228612)
location: region:223279-228612:1
so has part: feature:223279-224079:1:exon
so has part: feature:224373-224599:1:exon
so has part: feature:225792-225983:1:exon
so has part: feature:226626-228612:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:223279-224079:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:224373-224599:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:225792-225983:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:226626-228612:1:exon

HOXB9
type: Miscellaneous RNA
subclass of: SO_0000673
RO_0002162: 8839
gene: HOXB9
product: homeobox B9, transcript variant X7
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 16 samples with support for all annotated introns
transcript id: XR_003492696.2
SIO_010081: HOXB9
so part of: HOXB9
location: join(223285..224272,224373..224599,225792..225983,226626..228612)
location: region:223285-228612:1
so has part: feature:223285-224272:1:exon
so has part: feature:224373-224599:1:exon
so has part: feature:225792-225983:1:exon
so has part: feature:226626-228612:1:exon

position:223285:1
position: 223285
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:223285-224272:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:224373-224599:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:225792-225983:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:226626-228612:1:exon

HOXB9
type: Miscellaneous RNA
subclass of: SO_0000673
RO_0002162: 8839
gene: HOXB9
product: homeobox B9, transcript variant X12
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 7 samples with support for all annotated introns
transcript id: XR_005261171.1
SIO_010081: HOXB9
so part of: HOXB9
location: join(224907..225119,225792..225983,226626..228612)
location: region:224907-228612:1
so has part: feature:224907-225119:1:exon
so has part: feature:225792-225983:1:exon
so has part: feature:226626-228612:1:exon

position:224907:1
position: 224907
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:224907-225119:1:exon

position:225119:1
position: 225119
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:225792-225983:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:226626-228612:1:exon

HOXB9
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8839
gene: HOXB9
product: homeobox B9, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 16 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 51 samples with support for all annotated introns
transcript id: XM_005026154.5
SIO_010081: HOXB9
subclass of: SO_0000673
so part of: HOXB9
location: join(239297..239930,243430..244169)
location: region:239297-244169:1
so has part: feature:239297-239930:1:exon
so has part: feature:243430-244169:1:exon

position:239297:1
position: 239297
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:239297-239930:1:exon

position:239930:1
position: 239930
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:243430-244169:1:exon

HOXB9
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8839
gene: HOXB9
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: homeobox protein Hox-B9
translation: MSISGTLSNYYVDSIISHESEDSPSAKFSSGQYTSSRQAGHNEHLEFPSCSFQPKPPVFSASWTPLNPHSSGTLPAVYHPYIQHQSVPSDSRYLRSWLDPVPRAENLPGQGSVKAEPLLGRPGDVHKQGTQEYNLETSAAREGIVSNQRPSFEDNKVCEGSEDKDRTDQTNPAASWLHARSSRKKRCPYTKYQTLELEKEFLFNMYLTRDRRHEVARLLNLSERQVKIWFQNRRMKMKKMNKEQGKE
SIO_010081: HOXB9
subclass of: SO_0000673
so part of: HOXB9
location: join(239423..239930,243430..243665)
location: region:239423-243665:1
so has part: feature:239423-239930:1:exon
so has part: feature:243430-243665:1:exon

XP_005026211.1
type: Protein
SIO_000068: ncbiprotein

position:239423:1
position: 239423
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:243665:1
position: 243665
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:239423-239930:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:243430-243665:1:exon

HOXB8
type: Gene
subclass of: SO_0000704
RO_0002162: 8839
gene: HOXB8
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 244324..254891
location: region:244324-254891:1
so has part: feature:244324-254891:1:exon
subclass of: SO_0000010

101797800
type: Gene
SIO_000068: ncbigene

position:244324:1
position: 244324
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:254891:1
position: 254891
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:244324-254891:1:exon

HOXB8
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8839
gene: HOXB8
product: homeobox B8, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 12 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 13 samples with support for all annotated introns
transcript id: XM_038168559.1
SIO_010081: HOXB8
subclass of: SO_0000673
so part of: HOXB8
location: join(244324..245212,252894..253101,253946..254891)
location: region:244324-254891:1
so has part: feature:244324-245212:1:exon
so has part: feature:252894-253101:1:exon
so has part: feature:253946-254891:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:244324-245212:1:exon

position:245212:1
position: 245212
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:252894-253101:1:exon

position:252894:1
position: 252894
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:253101:1
position: 253101
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:253946-254891:1:exon

position:253946:1
position: 253946
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

HOXB8
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8839
gene: HOXB8
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: homeobox protein Hox-B8 isoform X3
translation: MPDGAGFSSDRSAGGFSEPPVRDWFSFISNPCAVACHGDPSNFYGYDPLQRQSLFSAQESDLVQYTDCKLAASGLGEEAESSEQSPSPTQLFPWMRPQAAAGRRRGRQTYSRYQTLELEKEFLFNPYLTRKRRIEVSHALGLTERQVKIWFQNRRMKWKKENNKDKFPSSKCEQEELEKQKMERAQEVDEEGEAQKVDKK
SIO_010081: HOXB8
subclass of: SO_0000673
so part of: HOXB8
location: join(245126..245212,252894..253101,253946..254253)
location: region:245126-254253:1
so has part: feature:245126-245212:1:exon
so has part: feature:252894-253101:1:exon
so has part: feature:253946-254253:1:exon

XP_038024487.1
type: Protein
SIO_000068: ncbiprotein

position:245126:1
position: 245126
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:254253:1
position: 254253
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:245126-245212:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:252894-253101:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:253946-254253:1:exon

HOXB8
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8839
gene: HOXB8
product: homeobox B8, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 13 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 55 samples with support for all annotated introns
transcript id: XM_005026155.5
SIO_010081: HOXB8
subclass of: SO_0000673
so part of: HOXB8
location: join(251728..253101,253946..254891)
location: region:251728-254891:1
so has part: feature:251728-253101:1:exon
so has part: feature:253946-254891:1:exon

position:251728:1
position: 251728
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:251728-253101:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:253946-254891:1:exon

HOXB8
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8839
gene: HOXB8
product: homeobox B8, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 12 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 72 samples with support for all annotated introns
transcript id: XM_005026156.5
SIO_010081: HOXB8
subclass of: SO_0000673
so part of: HOXB8
location: join(251729..253101,253949..254891)
location: region:251729-254891:1
so has part: feature:251729-253101:1:exon
so has part: feature:253949-254891:1:exon

position:251729:1
position: 251729
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:251729-253101:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:253949-254891:1:exon

position:253949:1
position: 253949
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

HOXB8
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8839
gene: HOXB8
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: homeobox protein Hox-B8 isoform X1
translation: MSSYFVNSLFSKYKTGDSLRPNYYDCGFAQDLGGRPTVVYGPSTGGTFQHPTQIQEFYHGASSLSSSPYQQNPCAVACHGDPSNFYGYDPLQRQSLFSAQESDLVQYTDCKLAASGLGEEAESSEQSPSPTQLFPWMRPQAAAGRRRGRQTYSRYQTLELEKEFLFNPYLTRKRRIEVSHALGLTERQVKIWFQNRRMKWKKENNKDKFPSSKCEQEELEKQKMERAQEVDEEGEAQKVDKK
SIO_010081: HOXB8
subclass of: SO_0000673
so part of: HOXB8
location: join(252681..253101,253946..254253)
location: region:252681-254253:1
so has part: feature:252681-253101:1:exon
so has part: feature:253946-254253:1:exon

XP_005026212.1
type: Protein
SIO_000068: ncbiprotein

position:252681:1
position: 252681
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:252681-253101:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:253946-254253:1:exon

HOXB8
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8839
gene: HOXB8
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: homeobox protein Hox-B8 isoform X2
translation: MSSYFVNSLFSKYKTGDSLRPNYYDCGFAQDLGGRPTVVYGPSTGGTFQHPTQIQEFYHGASSLSSSPYQQNPCAVACHGDPSNFYGYDPLQRQSLFSAQESDLVQYTDCKLAASGLGEEAESSEQSPSPTQLFPWMRPQAAGRRRGRQTYSRYQTLELEKEFLFNPYLTRKRRIEVSHALGLTERQVKIWFQNRRMKWKKENNKDKFPSSKCEQEELEKQKMERAQEVDEEGEAQKVDKK
SIO_010081: HOXB8
subclass of: SO_0000673
so part of: HOXB8
location: join(252681..253101,253949..254253)
location: region:252681-254253:1
so has part: feature:252681-253101:1:exon
so has part: feature:253949-254253:1:exon

XP_005026213.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:252681-253101:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:253949-254253:1:exon

LOC106019157
type: Gene
subclass of: SO_0000704
RO_0002162: 8839
gene: LOC106019157
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(254902..277380)
location: region:254902-277380:-1
so has part: feature:254902-277380:-1:exon
subclass of: SO_0000011

106019157
type: Gene
SIO_000068: ncbigene

position:254902:-1
position: 254902
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:277380:-1
position: 277380
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:254902-277380:-1:exon

LOC106019157
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 8839
nc RNA class: lncRNA
gene: LOC106019157
product: uncharacterized LOC106019157, transcript variant X5
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XR_005261179.1
SIO_010081: LOC106019157
subclass of: SO_0000673
so part of: LOC106019157
location: complement(join(254902..255912,256775..260353,260898..260952,274061..274147,277282..277380))
location: region:254902-277380:-1
so has part: feature:277282-277380:-1:exon
so has part: feature:274061-274147:-1:exon
so has part: feature:260898-260952:-1:exon
so has part: feature:256775-260353:-1:exon
so has part: feature:254902-255912:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:277282-277380:-1:exon

position:277282:-1
position: 277282
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:274061-274147:-1:exon

position:274061:-1
position: 274061
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:274147:-1
position: 274147
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:260898-260952:-1:exon

position:260898:-1
position: 260898
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:260952:-1
position: 260952
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:256775-260353:-1:exon

position:256775:-1
position: 256775
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:260353:-1
position: 260353
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:254902-255912:-1:exon

position:255912:-1
position: 255912
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

HOXB6
type: Gene
subclass of: SO_0000704
RO_0002162: 8839
gene: HOXB6
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 255043..264691
location: region:255043-264691:1
so has part: feature:255043-264691:1:exon
subclass of: SO_0000010

101798944
type: Gene
SIO_000068: ncbigene

position:255043:1
position: 255043
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:264691:1
position: 264691
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:255043-264691:1:exon

HOXB6
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8839
gene: HOXB6
product: homeobox B6
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 22 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 88 samples with support for all annotated introns
transcript id: XM_013105668.4
SIO_010081: HOXB6
subclass of: SO_0000673
so part of: HOXB6
location: join(255043..255181,262149..262735,264158..264691)
location: region:255043-264691:1
so has part: feature:255043-255181:1:exon
so has part: feature:262149-262735:1:exon
so has part: feature:264158-264691:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:255043-255181:1:exon

position:255181:1
position: 255181
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:262149-262735:1:exon

position:262149:1
position: 262149
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:262735:1
position: 262735
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:264158-264691:1:exon

position:264158:1
position: 264158
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

HOXB3
type: Gene
subclass of: SO_0000704
RO_0002162: 8839
gene: HOXB3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 255063..312425
location: region:255063-312425:1
so has part: feature:255063-312425:1:exon
subclass of: SO_0000010

101799260
type: Gene
SIO_000068: ncbigene

position:255063:1
position: 255063
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:312425:1
position: 312425
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:255063-312425:1:exon

HOXB3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8839
gene: HOXB3
product: homeobox B3, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 34 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 7 samples with support for all annotated introns
transcript id: XM_021276738.3
SIO_010081: HOXB3
subclass of: SO_0000673
so part of: HOXB3
location: join(255063..255181,288534..288777,302898..302957,308395..308948,310009..312425)
location: region:255063-312425:1
so has part: feature:255063-255181:1:exon
so has part: feature:288534-288777:1:exon
so has part: feature:302898-302957:1:exon
so has part: feature:308395-308948:1:exon
so has part: feature:310009-312425:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:255063-255181:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:288534-288777:1:exon

position:288534:1
position: 288534
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:288777:1
position: 288777
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:302898-302957:1:exon

position:302898:1
position: 302898
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:302957:1
position: 302957
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:308395-308948:1:exon

position:308395:1
position: 308395
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:308948:1
position: 308948
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:310009-312425:1:exon

position:310009:1
position: 310009
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC106019157
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 8839
nc RNA class: lncRNA
gene: LOC106019157
product: uncharacterized LOC106019157, transcript variant X8
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 11 samples with support for all annotated introns
transcript id: XR_005261181.1
SIO_010081: LOC106019157
subclass of: SO_0000673
so part of: LOC106019157
location: complement(join(256476..256978,257100..260353,260898..260952,274061..274147,277282..277380))
location: region:256476-277380:-1
so has part: feature:277282-277380:-1:exon
so has part: feature:274061-274147:-1:exon
so has part: feature:260898-260952:-1:exon
so has part: feature:257100-260353:-1:exon
so has part: feature:256476-256978:-1:exon

position:256476:-1
position: 256476
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:277282-277380:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:274061-274147:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:260898-260952:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:257100-260353:-1:exon

position:257100:-1
position: 257100
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:256476-256978:-1:exon

position:256978:-1
position: 256978
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC106019157
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 8839
nc RNA class: lncRNA
gene: LOC106019157
product: uncharacterized LOC106019157, transcript variant X9
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 8 samples with support for all annotated introns
transcript id: XR_005261182.1
SIO_010081: LOC106019157
subclass of: SO_0000673
so part of: LOC106019157
location: complement(join(256590..260159,260301..260353,274061..274147,277282..277380))
location: region:256590-277380:-1
so has part: feature:277282-277380:-1:exon
so has part: feature:274061-274147:-1:exon
so has part: feature:260301-260353:-1:exon
so has part: feature:256590-260159:-1:exon

position:256590:-1
position: 256590
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:277282-277380:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:274061-274147:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:260301-260353:-1:exon

position:260301:-1
position: 260301
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:256590-260159:-1:exon

position:260159:-1
position: 260159
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC106019157
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 8839
nc RNA class: lncRNA
gene: LOC106019157
product: uncharacterized LOC106019157, transcript variant X6
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 22 samples with support for all annotated introns
transcript id: XR_003492688.2
SIO_010081: LOC106019157
subclass of: SO_0000673
so part of: LOC106019157
location: complement(join(256590..260159,260301..260353,260898..260952,274061..274147,277282..277380))
location: region:256590-277380:-1
so has part: feature:277282-277380:-1:exon
so has part: feature:274061-274147:-1:exon
so has part: feature:260898-260952:-1:exon
so has part: feature:260301-260353:-1:exon
so has part: feature:256590-260159:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:277282-277380:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:274061-274147:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:260898-260952:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:260301-260353:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:256590-260159:-1:exon

LOC106019157
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 8839
nc RNA class: lncRNA
gene: LOC106019157
product: uncharacterized LOC106019157, transcript variant X10
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 14 samples with support for all annotated introns
transcript id: XR_005261183.1
SIO_010081: LOC106019157
subclass of: SO_0000673
so part of: LOC106019157
location: complement(join(256590..259356,260026..260353,260898..260952,274061..274147,277282..277380))
location: region:256590-277380:-1
so has part: feature:277282-277380:-1:exon
so has part: feature:274061-274147:-1:exon
so has part: feature:260898-260952:-1:exon
so has part: feature:260026-260353:-1:exon
so has part: feature:256590-259356:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:277282-277380:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:274061-274147:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:260898-260952:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:260026-260353:-1:exon

position:260026:-1
position: 260026
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:256590-259356:-1:exon

position:259356:-1
position: 259356
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC106019157
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 8839
nc RNA class: lncRNA
gene: LOC106019157
product: uncharacterized LOC106019157, transcript variant X11
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 11 samples with support for all annotated introns
transcript id: XR_005261184.1
SIO_010081: LOC106019157
subclass of: SO_0000673
so part of: LOC106019157
location: complement(join(256590..260159,260301..260353,270862..271135))
location: region:256590-271135:-1
so has part: feature:270862-271135:-1:exon
so has part: feature:260301-260353:-1:exon
so has part: feature:256590-260159:-1:exon

position:271135:-1
position: 271135
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:270862-271135:-1:exon

position:270862:-1
position: 270862
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:260301-260353:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:256590-260159:-1:exon

LOC106019157
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 8839
nc RNA class: lncRNA
gene: LOC106019157
product: uncharacterized LOC106019157, transcript variant X7
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 20 samples with support for all annotated introns
transcript id: XR_005261180.1
SIO_010081: LOC106019157
subclass of: SO_0000673
so part of: LOC106019157
location: complement(join(256590..260159,260301..260353,260898..260952,270862..271135))
location: region:256590-271135:-1
so has part: feature:270862-271135:-1:exon
so has part: feature:260898-260952:-1:exon
so has part: feature:260301-260353:-1:exon
so has part: feature:256590-260159:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:270862-271135:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:260898-260952:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:260301-260353:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:256590-260159:-1:exon

LOC106019157
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 8839
nc RNA class: lncRNA
gene: LOC106019157
product: uncharacterized LOC106019157, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 11 samples with support for all annotated introns
transcript id: XR_005261177.1
SIO_010081: LOC106019157
subclass of: SO_0000673
so part of: LOC106019157
location: complement(join(256717..260353,274061..274147,277282..277380))
location: region:256717-277380:-1
so has part: feature:277282-277380:-1:exon
so has part: feature:274061-274147:-1:exon
so has part: feature:256717-260353:-1:exon

position:256717:-1
position: 256717
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:277282-277380:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:274061-274147:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:256717-260353:-1:exon

LOC106019157
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 8839
nc RNA class: lncRNA
gene: LOC106019157
product: uncharacterized LOC106019157, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 33 samples with support for all annotated introns
transcript id: XR_005261175.1
SIO_010081: LOC106019157
subclass of: SO_0000673
so part of: LOC106019157
location: complement(join(256717..260353,260898..260952,274061..274147,277282..277380))
location: region:256717-277380:-1
so has part: feature:277282-277380:-1:exon
so has part: feature:274061-274147:-1:exon
so has part: feature:260898-260952:-1:exon
so has part: feature:256717-260353:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:277282-277380:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:274061-274147:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:260898-260952:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:256717-260353:-1:exon

LOC106019157
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 8839
nc RNA class: lncRNA
gene: LOC106019157
product: uncharacterized LOC106019157, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 16 samples with support for all annotated introns
transcript id: XR_005261178.1
SIO_010081: LOC106019157
subclass of: SO_0000673
so part of: LOC106019157
location: complement(join(256717..260353,270862..271135))
location: region:256717-271135:-1
so has part: feature:270862-271135:-1:exon
so has part: feature:256717-260353:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:270862-271135:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:256717-260353:-1:exon

LOC106019157
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 8839
nc RNA class: lncRNA
gene: LOC106019157
product: uncharacterized LOC106019157, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 30 samples with support for all annotated introns
transcript id: XR_005261176.1
SIO_010081: LOC106019157
subclass of: SO_0000673
so part of: LOC106019157
location: complement(join(256717..260353,260898..260952,270862..271135))
location: region:256717-271135:-1
so has part: feature:270862-271135:-1:exon
so has part: feature:260898-260952:-1:exon
so has part: feature:256717-260353:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:270862-271135:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:260898-260952:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:256717-260353:-1:exon

HOXB6
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8839
gene: HOXB6
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: homeobox protein Hox-B6
translation: MSSYFVNSTFPVSLAAGQEPFLGQIPLYPSGYADPLRHYPTTYGATGVQEKGYASSPYYQQSNGAYSRSSACDYGAGGFFREKDPACAPSNLDEVPFAPEPRKSDCAQSKTVFGESEEQKCSAPVYPWMQRMNSCNSSSFGPSGRRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHSLCLTERQIKIWFQNRRMKWKKENKLLNSSQLSAEEEEEKTAE
SIO_010081: HOXB6
subclass of: SO_0000673
so part of: HOXB6
location: join(262327..262735,264158..264417)
location: region:262327-264417:1
so has part: feature:262327-262735:1:exon
so has part: feature:264158-264417:1:exon

XP_012961122.1
type: Protein
SIO_000068: ncbiprotein

position:262327:1
position: 262327
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:264417:1
position: 264417
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:262327-262735:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:264158-264417:1:exon

HOXB5
type: Gene
subclass of: SO_0000704
RO_0002162: 8839
gene: HOXB5
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 267006..269981
location: region:267006-269981:1
so has part: feature:267006-269981:1:exon
subclass of: SO_0000010

101798635
type: Gene
SIO_000068: ncbigene

position:267006:1
position: 267006
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:269981:1
position: 269981
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:267006-269981:1:exon

HOXB5
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8839
gene: HOXB5
product: homeobox B5
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 32 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 113 samples with support for all annotated introns
transcript id: XM_005026161.5
SIO_010081: HOXB5
subclass of: SO_0000673
so part of: HOXB5
location: join(267006..267922,268815..269981)
location: region:267006-269981:1
so has part: feature:267006-267922:1:exon
so has part: feature:268815-269981:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:267006-267922:1:exon

position:267922:1
position: 267922
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:268815-269981:1:exon

position:268815:1
position: 268815
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

HOXB5
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8839
gene: HOXB5
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: homeobox protein Hox-B5
translation: MSSYFVNSFSGRYPNGPDYQLLNYGTSSSMNGSYRDSSTMHSSSYGYNYNGMDLSINRSASSSHFGAVGESSRGFPSPAQESRFRQASSCSLSSPDSLPCSNSESHGGKPAPSPSDQATSASTNTNFTELDETSASSGADEGTPISSSIPRAQAEPIATSTAATEGQAPQIFPWMRKLHISHDMTGPDGKRARTAYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLSERQIKIWFQNRRMKWKKDNKLKSMSLASAGSAFQP
SIO_010081: HOXB5
subclass of: SO_0000673
so part of: HOXB5
location: join(267376..267922,268815..269062)
location: region:267376-269062:1
so has part: feature:267376-267922:1:exon
so has part: feature:268815-269062:1:exon

XP_005026218.1
type: Protein
SIO_000068: ncbiprotein

position:267376:1
position: 267376
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:269062:1
position: 269062
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:267376-267922:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:268815-269062:1:exon

HOXB3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8839
gene: HOXB3
product: homeobox B3, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 34 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 9 samples with support for all annotated introns
transcript id: XM_005026164.5
SIO_010081: HOXB3
subclass of: SO_0000673
so part of: HOXB3
location: join(277416..280730,288534..288777,302898..302957,308395..308948,310009..312425)
location: region:277416-312425:1
so has part: feature:277416-280730:1:exon
so has part: feature:288534-288777:1:exon
so has part: feature:302898-302957:1:exon
so has part: feature:308395-308948:1:exon
so has part: feature:310009-312425:1:exon

position:277416:1
position: 277416
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:277416-280730:1:exon

position:280730:1
position: 280730
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:288534-288777:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:302898-302957:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:308395-308948:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:310009-312425:1:exon

HOXB4
type: Gene
subclass of: SO_0000704
RO_0002162: 8839
gene: HOXB4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 283910..286938
location: region:283910-286938:1
so has part: feature:283910-286938:1:exon
subclass of: SO_0000010

101799808
type: Gene
SIO_000068: ncbigene

position:283910:1
position: 283910
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:286938:1
position: 286938
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:283910-286938:1:exon

HOXB4
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8839
gene: HOXB4
product: homeobox B4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 26 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 102 samples with support for all annotated introns
transcript id: XM_005026168.5
SIO_010081: HOXB4
subclass of: SO_0000673
so part of: HOXB4
location: join(283910..284151,284255..284681,285476..286938)
location: region:283910-286938:1
so has part: feature:283910-284151:1:exon
so has part: feature:284255-284681:1:exon
so has part: feature:285476-286938:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:283910-284151:1:exon

position:284151:1
position: 284151
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:284255-284681:1:exon

position:284255:1
position: 284255
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:284681:1
position: 284681
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:285476-286938:1:exon

position:285476:1
position: 285476
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

HOXB3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8839
gene: HOXB3
product: homeobox B3, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 34 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_038168561.1
SIO_010081: HOXB3
subclass of: SO_0000673
so part of: HOXB3
location: join(284013..284151,288534..288777,293271..293273,302898..302957,308395..308948,310009..312425)
location: region:284013-312425:1
so has part: feature:284013-284151:1:exon
so has part: feature:288534-288777:1:exon
so has part: feature:293271-293273:1:exon
so has part: feature:302898-302957:1:exon
so has part: feature:308395-308948:1:exon
so has part: feature:310009-312425:1:exon

position:284013:1
position: 284013
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:284013-284151:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:288534-288777:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:293271-293273:1:exon

position:293271:1
position: 293271
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:293273:1
position: 293273
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:302898-302957:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:308395-308948:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:310009-312425:1:exon

HOXB3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8839
gene: HOXB3
product: homeobox B3, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 34 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XM_038168560.1
SIO_010081: HOXB3
subclass of: SO_0000673
so part of: HOXB3
location: join(284013..284151,288534..288777,302898..302957,308395..308948,310009..312425)
location: region:284013-312425:1
so has part: feature:284013-284151:1:exon
so has part: feature:288534-288777:1:exon
so has part: feature:302898-302957:1:exon
so has part: feature:308395-308948:1:exon
so has part: feature:310009-312425:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:284013-284151:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:288534-288777:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:302898-302957:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:308395-308948:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:310009-312425:1:exon

HOXB3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8839
gene: HOXB3
product: homeobox B3, transcript variant X8
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 32 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
transcript id: XM_021276741.3
SIO_010081: HOXB3
subclass of: SO_0000673
so part of: HOXB3
location: join(284013..284151,288534..288777,302898..302957,308395..308948,310012..312425)
location: region:284013-312425:1
so has part: feature:284013-284151:1:exon
so has part: feature:288534-288777:1:exon
so has part: feature:302898-302957:1:exon
so has part: feature:308395-308948:1:exon
so has part: feature:310012-312425:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:284013-284151:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:288534-288777:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:302898-302957:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:308395-308948:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:310012-312425:1:exon

position:310012:1
position: 310012
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

HOXB3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8839
gene: HOXB3
product: homeobox B3, transcript variant X5
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 34 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XM_038168562.1
SIO_010081: HOXB3
subclass of: SO_0000673
so part of: HOXB3
location: join(284013..284151,288534..288777,308395..308948,310009..312425)
location: region:284013-312425:1
so has part: feature:284013-284151:1:exon
so has part: feature:288534-288777:1:exon
so has part: feature:308395-308948:1:exon
so has part: feature:310009-312425:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:284013-284151:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:288534-288777:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:308395-308948:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:310009-312425:1:exon

HOXB4
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8839
gene: HOXB4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: homeobox protein Hox-B4
translation: MLRAPGEPVLGRFPYPGIAGHIAIGPCCHMDSNFVHLTKLMAMSSFLINSNYVDPKFPPCEEYSHSDYLPNHSPEYYSSQRRESTFQHEAMYQPRSACNEQLYSSCQSSGHQAAVLSPRGHVHPPAGLQSHLSEPNHPCEPVTPSPPPSCSQNSLNQSPSNSSCKEPVVYPWMKKVHVSTVNPNYSGGEPKRSRTAYTRQQVLELEKEFHYNRYLTRRRRVEIAHSLCLSERQIKIWFQNRRMKWKKDHKLPNTKIRSNPSTSSASLQIPQGGSQVRSSGPATSL
SIO_010081: HOXB4
subclass of: SO_0000673
so part of: HOXB4
location: join(284038..284151,284255..284681,285476..285792)
location: region:284038-285792:1
so has part: feature:284038-284151:1:exon
so has part: feature:284255-284681:1:exon
so has part: feature:285476-285792:1:exon

XP_005026225.2
type: Protein
SIO_000068: ncbiprotein

position:284038:1
position: 284038
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:285792:1
position: 285792
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:284038-284151:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:284255-284681:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:285476-285792:1:exon

HOXB3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8839
gene: HOXB3
product: homeobox B3, transcript variant X6
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 34 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 8 samples with support for all annotated introns
transcript id: XM_027445523.2
SIO_010081: HOXB3
subclass of: SO_0000673
so part of: HOXB3
location: join(288861..292253,302898..302957,308395..308948,310009..312425)
location: region:288861-312425:1
so has part: feature:288861-292253:1:exon
so has part: feature:302898-302957:1:exon
so has part: feature:308395-308948:1:exon
so has part: feature:310009-312425:1:exon

position:288861:1
position: 288861
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:288861-292253:1:exon

position:292253:1
position: 292253
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:302898-302957:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:308395-308948:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:310009-312425:1:exon

HOXB3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8839
gene: HOXB3
product: homeobox B3, transcript variant X7
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 34 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 38 samples with support for all annotated introns
transcript id: XM_005026166.5
SIO_010081: HOXB3
subclass of: SO_0000673
so part of: HOXB3
location: join(304897..305326,308395..308948,310009..312425)
location: region:304897-312425:1
so has part: feature:304897-305326:1:exon
so has part: feature:308395-308948:1:exon
so has part: feature:310009-312425:1:exon

position:304897:1
position: 304897
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:304897-305326:1:exon

position:305326:1
position: 305326
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:308395-308948:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:310009-312425:1:exon

HOXB3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8839
gene: HOXB3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: homeobox protein Hox-B3 isoform X1
translation: MQKTTYYDSSTLFGGYSYGSTNGFGYEGPQQPFQPGSHVESDYQRSACSLQSLGNTTPHTKSKDLNGSCMRPSLPQEHHPPPTVSPPPNPATNSTSNNSNNQSGSSKSAPSKANLSANASLTKQIFPWMKESRQNSKQKNTSPSTAETCSGEKSPPGSSASKRARTAYTSAQLVELEKEFHFNRYLCRPRRVEMANLLNLSERQIKIWFQNRRMKYKKDQKSKGMGSSSGGPSPTSSPPQPMQSSAGFMNALHTMSSNYDAPSPPSFNKPHQNAYAMPTNYQNPIKGCPSQQKYTNTAPEYDPHVLQGNGVTYGTPSMQGSPVYVGGNYVDSMPTSGPSLYGLNHLPHPQAASMDYSGPPQMPPSQHHGPCETHPTYTDLSTHHASSQGRIQEAPKLTHL
SIO_010081: HOXB3
subclass of: SO_0000673
so part of: HOXB3
location: join(308513..308948,310009..310775)
location: region:308513-310775:1
so has part: feature:308513-308948:1:exon
so has part: feature:310009-310775:1:exon

XP_021132413.1
type: Protein
SIO_000068: ncbiprotein

position:308513:1
position: 308513
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:310775:1
position: 310775
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:308513-308948:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:310009-310775:1:exon

HOXB3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8839
gene: HOXB3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: homeobox protein Hox-B3 isoform X1
translation: MQKTTYYDSSTLFGGYSYGSTNGFGYEGPQQPFQPGSHVESDYQRSACSLQSLGNTTPHTKSKDLNGSCMRPSLPQEHHPPPTVSPPPNPATNSTSNNSNNQSGSSKSAPSKANLSANASLTKQIFPWMKESRQNSKQKNTSPSTAETCSGEKSPPGSSASKRARTAYTSAQLVELEKEFHFNRYLCRPRRVEMANLLNLSERQIKIWFQNRRMKYKKDQKSKGMGSSSGGPSPTSSPPQPMQSSAGFMNALHTMSSNYDAPSPPSFNKPHQNAYAMPTNYQNPIKGCPSQQKYTNTAPEYDPHVLQGNGVTYGTPSMQGSPVYVGGNYVDSMPTSGPSLYGLNHLPHPQAASMDYSGPPQMPPSQHHGPCETHPTYTDLSTHHASSQGRIQEAPKLTHL
SIO_010081: HOXB3
subclass of: SO_0000673
so part of: HOXB3
location: join(308513..308948,310009..310775)
location: region:308513-310775:1
so has part: feature:308513-308948:1:exon
so has part: feature:310009-310775:1:exon

XP_027301324.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:308513-308948:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:310009-310775:1:exon

HOXB3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8839
gene: HOXB3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: homeobox protein Hox-B3 isoform X1
translation: MQKTTYYDSSTLFGGYSYGSTNGFGYEGPQQPFQPGSHVESDYQRSACSLQSLGNTTPHTKSKDLNGSCMRPSLPQEHHPPPTVSPPPNPATNSTSNNSNNQSGSSKSAPSKANLSANASLTKQIFPWMKESRQNSKQKNTSPSTAETCSGEKSPPGSSASKRARTAYTSAQLVELEKEFHFNRYLCRPRRVEMANLLNLSERQIKIWFQNRRMKYKKDQKSKGMGSSSGGPSPTSSPPQPMQSSAGFMNALHTMSSNYDAPSPPSFNKPHQNAYAMPTNYQNPIKGCPSQQKYTNTAPEYDPHVLQGNGVTYGTPSMQGSPVYVGGNYVDSMPTSGPSLYGLNHLPHPQAASMDYSGPPQMPPSQHHGPCETHPTYTDLSTHHASSQGRIQEAPKLTHL
SIO_010081: HOXB3
subclass of: SO_0000673
so part of: HOXB3
location: join(308513..308948,310009..310775)
location: region:308513-310775:1
so has part: feature:308513-308948:1:exon
so has part: feature:310009-310775:1:exon

XP_038024488.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:308513-308948:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:310009-310775:1:exon

HOXB3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8839
gene: HOXB3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: homeobox protein Hox-B3 isoform X1
translation: MQKTTYYDSSTLFGGYSYGSTNGFGYEGPQQPFQPGSHVESDYQRSACSLQSLGNTTPHTKSKDLNGSCMRPSLPQEHHPPPTVSPPPNPATNSTSNNSNNQSGSSKSAPSKANLSANASLTKQIFPWMKESRQNSKQKNTSPSTAETCSGEKSPPGSSASKRARTAYTSAQLVELEKEFHFNRYLCRPRRVEMANLLNLSERQIKIWFQNRRMKYKKDQKSKGMGSSSGGPSPTSSPPQPMQSSAGFMNALHTMSSNYDAPSPPSFNKPHQNAYAMPTNYQNPIKGCPSQQKYTNTAPEYDPHVLQGNGVTYGTPSMQGSPVYVGGNYVDSMPTSGPSLYGLNHLPHPQAASMDYSGPPQMPPSQHHGPCETHPTYTDLSTHHASSQGRIQEAPKLTHL
SIO_010081: HOXB3
subclass of: SO_0000673
so part of: HOXB3
location: join(308513..308948,310009..310775)
location: region:308513-310775:1
so has part: feature:308513-308948:1:exon
so has part: feature:310009-310775:1:exon

XP_038024489.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:308513-308948:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:310009-310775:1:exon

HOXB3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8839
gene: HOXB3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: homeobox protein Hox-B3 isoform X1
translation: MQKTTYYDSSTLFGGYSYGSTNGFGYEGPQQPFQPGSHVESDYQRSACSLQSLGNTTPHTKSKDLNGSCMRPSLPQEHHPPPTVSPPPNPATNSTSNNSNNQSGSSKSAPSKANLSANASLTKQIFPWMKESRQNSKQKNTSPSTAETCSGEKSPPGSSASKRARTAYTSAQLVELEKEFHFNRYLCRPRRVEMANLLNLSERQIKIWFQNRRMKYKKDQKSKGMGSSSGGPSPTSSPPQPMQSSAGFMNALHTMSSNYDAPSPPSFNKPHQNAYAMPTNYQNPIKGCPSQQKYTNTAPEYDPHVLQGNGVTYGTPSMQGSPVYVGGNYVDSMPTSGPSLYGLNHLPHPQAASMDYSGPPQMPPSQHHGPCETHPTYTDLSTHHASSQGRIQEAPKLTHL
SIO_010081: HOXB3
subclass of: SO_0000673
so part of: HOXB3
location: join(308513..308948,310009..310775)
location: region:308513-310775:1
so has part: feature:308513-308948:1:exon
so has part: feature:310009-310775:1:exon

XP_038024490.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:308513-308948:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:310009-310775:1:exon

HOXB3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8839
gene: HOXB3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: homeobox protein Hox-B3 isoform X1
translation: MQKTTYYDSSTLFGGYSYGSTNGFGYEGPQQPFQPGSHVESDYQRSACSLQSLGNTTPHTKSKDLNGSCMRPSLPQEHHPPPTVSPPPNPATNSTSNNSNNQSGSSKSAPSKANLSANASLTKQIFPWMKESRQNSKQKNTSPSTAETCSGEKSPPGSSASKRARTAYTSAQLVELEKEFHFNRYLCRPRRVEMANLLNLSERQIKIWFQNRRMKYKKDQKSKGMGSSSGGPSPTSSPPQPMQSSAGFMNALHTMSSNYDAPSPPSFNKPHQNAYAMPTNYQNPIKGCPSQQKYTNTAPEYDPHVLQGNGVTYGTPSMQGSPVYVGGNYVDSMPTSGPSLYGLNHLPHPQAASMDYSGPPQMPPSQHHGPCETHPTYTDLSTHHASSQGRIQEAPKLTHL
SIO_010081: HOXB3
subclass of: SO_0000673
so part of: HOXB3
location: join(308513..308948,310009..310775)
location: region:308513-310775:1
so has part: feature:308513-308948:1:exon
so has part: feature:310009-310775:1:exon

XP_005026221.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:308513-308948:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:310009-310775:1:exon

HOXB3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8839
gene: HOXB3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: homeobox protein Hox-B3 isoform X1
translation: MQKTTYYDSSTLFGGYSYGSTNGFGYEGPQQPFQPGSHVESDYQRSACSLQSLGNTTPHTKSKDLNGSCMRPSLPQEHHPPPTVSPPPNPATNSTSNNSNNQSGSSKSAPSKANLSANASLTKQIFPWMKESRQNSKQKNTSPSTAETCSGEKSPPGSSASKRARTAYTSAQLVELEKEFHFNRYLCRPRRVEMANLLNLSERQIKIWFQNRRMKYKKDQKSKGMGSSSGGPSPTSSPPQPMQSSAGFMNALHTMSSNYDAPSPPSFNKPHQNAYAMPTNYQNPIKGCPSQQKYTNTAPEYDPHVLQGNGVTYGTPSMQGSPVYVGGNYVDSMPTSGPSLYGLNHLPHPQAASMDYSGPPQMPPSQHHGPCETHPTYTDLSTHHASSQGRIQEAPKLTHL
SIO_010081: HOXB3
subclass of: SO_0000673
so part of: HOXB3
location: join(308513..308948,310009..310775)
location: region:308513-310775:1
so has part: feature:308513-308948:1:exon
so has part: feature:310009-310775:1:exon

XP_005026223.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:308513-308948:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:310009-310775:1:exon

HOXB3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8839
gene: HOXB3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: homeobox protein Hox-B3 isoform X2
translation: MQKTTYYDSSTLFGGYSYGSTNGFGYEGPQQPFQPGSHVESDYQRSACSLQSLGNTTPHTKSKDLNGSCMRPSLPQEHHPPPTVSPPPNPATNSTSNNSNNQSGSSKSAPSKANLSANASLTKQIFPWMKESRQNSKQKNTSPSTETCSGEKSPPGSSASKRARTAYTSAQLVELEKEFHFNRYLCRPRRVEMANLLNLSERQIKIWFQNRRMKYKKDQKSKGMGSSSGGPSPTSSPPQPMQSSAGFMNALHTMSSNYDAPSPPSFNKPHQNAYAMPTNYQNPIKGCPSQQKYTNTAPEYDPHVLQGNGVTYGTPSMQGSPVYVGGNYVDSMPTSGPSLYGLNHLPHPQAASMDYSGPPQMPPSQHHGPCETHPTYTDLSTHHASSQGRIQEAPKLTHL
SIO_010081: HOXB3
subclass of: SO_0000673
so part of: HOXB3
location: join(308513..308948,310012..310775)
location: region:308513-310775:1
so has part: feature:308513-308948:1:exon
so has part: feature:310012-310775:1:exon

XP_021132416.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:308513-308948:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:310012-310775:1:exon

HOXB2
type: Gene
subclass of: SO_0000704
RO_0002162: 8839
gene: HOXB2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 315166..318353
location: region:315166-318353:1
so has part: feature:315166-318353:1:exon
subclass of: SO_0000010

101799996
type: Gene
SIO_000068: ncbigene

position:315166:1
position: 315166
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:318353:1
position: 318353
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:315166-318353:1:exon

HOXB2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8839
gene: HOXB2
product: homeobox B2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 16 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 113 samples with support for all annotated introns
transcript id: XM_027445558.2
SIO_010081: HOXB2
subclass of: SO_0000673
so part of: HOXB2
location: join(315166..315787,316884..318353)
location: region:315166-318353:1
so has part: feature:315166-315787:1:exon
so has part: feature:316884-318353:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:315166-315787:1:exon

position:315787:1
position: 315787
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:316884-318353:1:exon

position:316884:1
position: 316884
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

HOXB2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8839
gene: HOXB2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: homeobox protein Hox-B2
translation: MNFEFEREIGFINSQPSLAECLTSLPAVLETFQTSSIKNSTLIPPPFEQTVLSLNPCSSSQGRPRSQKRASHGLLQPQPPAQPGPLAAEFPWMKEKKSSKKATQAPSSSSSSSPPSSSSLPIPAAGSPADTQGLADTSGSRRLRTAYTNTQLLELEKEFHFNKYLCRPRRVEIAALLDLTERQVKVWFQNRRMKHKRQTRHKEPPDGDAACPGPDEGSDPLDEAEDGPALGPSRGQARPEPPGGPRSPAQPRAAASRPQRARPGGRDSPSLPELGIFSAEPCLQLSPDLQDSLGSPVHFSEEDLDFFASALCAAELQHLNFQ
SIO_010081: HOXB2
subclass of: SO_0000673
so part of: HOXB2
location: join(315400..315787,316884..317464)
location: region:315400-317464:1
so has part: feature:315400-315787:1:exon
so has part: feature:316884-317464:1:exon

XP_027301359.1
type: Protein
SIO_000068: ncbiprotein

position:315400:1
position: 315400
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:317464:1
position: 317464
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:315400-315787:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:316884-317464:1:exon

HOXB1
type: Gene
subclass of: SO_0000704
RO_0002162: 8839
gene: HOXB1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 326200..329345
location: region:326200-329345:1
so has part: feature:326200-329345:1:exon
subclass of: SO_0000010

113839985
type: Gene
SIO_000068: ncbigene

position:326200:1
position: 326200
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:329345:1
position: 329345
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:326200-329345:1:exon

HOXB1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8839
gene: HOXB1
product: homeobox B1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 7 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 32 samples with support for all annotated introns
transcript id: XM_027445545.2
SIO_010081: HOXB1
subclass of: SO_0000673
so part of: HOXB1
location: join(326200..327137,327866..329345)
location: region:326200-329345:1
so has part: feature:326200-327137:1:exon
so has part: feature:327866-329345:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:326200-327137:1:exon

position:327137:1
position: 327137
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:327866-329345:1:exon

position:327866:1
position: 327866
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

HOXB1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8839
gene: HOXB1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: homeobox protein Hox-B1
translation: MEGSFTALTYYLKVVGQAESPQNRLTLLHQWQMDNTRMNSFLEYAICNRGTGAYHHLEQSSPSFPSCSGSPATDTFHGDGRFGAGGSAAAAAQLPQQGPGFAPAPAGRAVPFAGAAPAAGYPAATCGAGYGPPPLYLGAQEPDAGYLPAAGYAASAGPHLGSIAEGYGGAAAGHYPQHLYGQEQPGFLAGLYGSLSPAPSEDKDPACPSEPCPRASTTQTFDWMKVKRNPPKTAKVSEYGLLGQPNTIRTNFTTKQLTELEKEFHFNKYLTRARRVEIAATLELNETQVKIWFQNRRMKQKKREKEGLAPAAASRSAKEASEASDQSNCTSPEASPSSVSS
SIO_010081: HOXB1
subclass of: SO_0000673
so part of: HOXB1
location: join(326438..327137,327866..328191)
location: region:326438-328191:1
so has part: feature:326438-327137:1:exon
so has part: feature:327866-328191:1:exon

XP_027301346.1
type: Protein
SIO_000068: ncbiprotein

position:326438:1
position: 326438
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:328191:1
position: 328191
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:326438-327137:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:327866-328191:1:exon

LOC119714176
type: Gene
subclass of: SO_0000704
RO_0002162: 8839
gene: LOC119714176
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 340963..347504
location: region:340963-347504:1
so has part: feature:340963-347504:1:exon
subclass of: SO_0000011

119714176
type: Gene
SIO_000068: ncbigene

position:340963:1
position: 340963
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:347504:1
position: 347504
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:340963-347504:1:exon

LOC119714176
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 8839
nc RNA class: lncRNA
gene: LOC119714176
product: uncharacterized LOC119714176
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
transcript id: XR_005261277.1
SIO_010081: LOC119714176
subclass of: SO_0000673
so part of: LOC119714176
location: join(340963..341043,346460..346588,347091..347504)
location: region:340963-347504:1
so has part: feature:340963-341043:1:exon
so has part: feature:346460-346588:1:exon
so has part: feature:347091-347504:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:340963-341043:1:exon

position:341043:1
position: 341043
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:346460-346588:1:exon

position:346460:1
position: 346460
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:346588:1
position: 346588
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:347091-347504:1:exon

position:347091:1
position: 347091
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

SKAP1
type: Gene
subclass of: SO_0000704
RO_0002162: 8839
gene: SKAP1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 380502..523449
location: region:380502-523449:1
so has part: feature:380502-523449:1:exon
subclass of: SO_0000010

110353900
type: Gene
SIO_000068: ncbigene

position:380502:1
position: 380502
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:523449:1
position: 523449
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:380502-523449:1:exon

SKAP1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8839
gene: SKAP1
product: src kinase associated phosphoprotein 1, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 115 samples with support for all annotated introns
transcript id: XM_038168943.1
SIO_010081: SKAP1
subclass of: SO_0000673
so part of: SKAP1
location: join(380502..380660,387085..387190,397940..397965,411273..411389,497125..497205,497974..498057,499908..500032,500786..500849,501879..502034,506322..506378,511696..511808,522764..522881,523221..523449)
location: region:380502-523449:1
so has part: feature:380502-380660:1:exon
so has part: feature:387085-387190:1:exon
so has part: feature:397940-397965:1:exon
so has part: feature:411273-411389:1:exon
so has part: feature:497125-497205:1:exon
so has part: feature:497974-498057:1:exon
so has part: feature:499908-500032:1:exon
so has part: feature:500786-500849:1:exon
so has part: feature:501879-502034:1:exon
so has part: feature:506322-506378:1:exon
so has part: feature:511696-511808:1:exon
so has part: feature:522764-522881:1:exon
so has part: feature:523221-523449:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:380502-380660:1:exon

position:380660:1
position: 380660
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:387085-387190:1:exon

position:387085:1
position: 387085
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:387190:1
position: 387190
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:397940-397965:1:exon

position:397940:1
position: 397940
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:397965:1
position: 397965
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:411273-411389:1:exon

position:411273:1
position: 411273
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:411389:1
position: 411389
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:497125-497205:1:exon

position:497125:1
position: 497125
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:497205:1
position: 497205
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:497974-498057:1:exon

position:497974:1
position: 497974
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:498057:1
position: 498057
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:499908-500032:1:exon

position:499908:1
position: 499908
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:500032:1
position: 500032
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:500786-500849:1:exon

position:500786:1
position: 500786
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:500849:1
position: 500849
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:501879-502034:1:exon

position:501879:1
position: 501879
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:502034:1
position: 502034
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:506322-506378:1:exon

position:506322:1
position: 506322
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:506378:1
position: 506378
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:511696-511808:1:exon

position:511696:1
position: 511696
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:511808:1
position: 511808
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:522764-522881:1:exon

position:522764:1
position: 522764
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:522881:1
position: 522881
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:523221-523449:1:exon

position:523221:1
position: 523221
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

SKAP1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8839
gene: SKAP1
product: src kinase associated phosphoprotein 1, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 31 samples with support for all annotated introns
transcript id: XM_038168944.1
SIO_010081: SKAP1
subclass of: SO_0000673
so part of: SKAP1
location: join(380502..380660,387085..387190,397940..397965,411273..411389,497125..497205,497974..498057,499908..500032,500786..500849,501879..502034,511696..511808,522764..522881,523221..523449)
location: region:380502-523449:1
so has part: feature:380502-380660:1:exon
so has part: feature:387085-387190:1:exon
so has part: feature:397940-397965:1:exon
so has part: feature:411273-411389:1:exon
so has part: feature:497125-497205:1:exon
so has part: feature:497974-498057:1:exon
so has part: feature:499908-500032:1:exon
so has part: feature:500786-500849:1:exon
so has part: feature:501879-502034:1:exon
so has part: feature:511696-511808:1:exon
so has part: feature:522764-522881:1:exon
so has part: feature:523221-523449:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:380502-380660:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:387085-387190:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:397940-397965:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:411273-411389:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:497125-497205:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:497974-498057:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:499908-500032:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:500786-500849:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:501879-502034:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:511696-511808:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:522764-522881:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:523221-523449:1:exon

SKAP1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8839
gene: SKAP1
product: src kinase associated phosphoprotein 1, transcript variant X5
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 14 samples with support for all annotated introns
transcript id: XM_038168947.1
SIO_010081: SKAP1
subclass of: SO_0000673
so part of: SKAP1
location: join(380502..380660,387085..387190,397940..397965,411273..411389,497125..497205,497974..498057,499908..500032,500786..500849,501879..502034,503042..503344)
location: region:380502-503344:1
so has part: feature:380502-380660:1:exon
so has part: feature:387085-387190:1:exon
so has part: feature:397940-397965:1:exon
so has part: feature:411273-411389:1:exon
so has part: feature:497125-497205:1:exon
so has part: feature:497974-498057:1:exon
so has part: feature:499908-500032:1:exon
so has part: feature:500786-500849:1:exon
so has part: feature:501879-502034:1:exon
so has part: feature:503042-503344:1:exon

position:503344:1
position: 503344
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:380502-380660:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:387085-387190:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:397940-397965:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:411273-411389:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:497125-497205:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:497974-498057:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:499908-500032:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:500786-500849:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:501879-502034:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:503042-503344:1:exon

position:503042:1
position: 503042
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

SKAP1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8839
gene: SKAP1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: src kinase-associated phosphoprotein 1 isoform X1
translation: MLPEEVRRLLEDAECYLADGLQNENLSPNAREQRDAILFSFQQVKARYHLEFLPRGEDQHDAGFGQDSSDENQSWSLAPSMTSDVSLPSDFLDDGLEEVTPRPVQDTGNILKQGYLEKRSRDHSFFGSEWQKRWCVLNKRTFFYYANEKSKQPKGTFSIEQYSARLAFHLRKDSRRRCCFELICPGKRTYEFTAPSPAEAEDWVDQIQFLMKDLSSLTIPYDEEDEEELYNDVDSSDSVTTASHNTTLNPDDGMEEDDVYEVFPEKEPSIPEDSEDSGSGQRNGGPQRDYANYYQGMWDCSGEHPNELSFHRGDLIYILSKEYNMYGWWVGELNNTVGIVPKDYLVAAYDLEE
SIO_010081: SKAP1
subclass of: SO_0000673
so part of: SKAP1
location: join(380627..380660,387085..387190,397940..397965,411273..411389,497125..497205,497974..498057,499908..500032,500786..500849,501879..502034,506322..506378,511696..511808,522764..522862)
location: region:380627-522862:1
so has part: feature:380627-380660:1:exon
so has part: feature:387085-387190:1:exon
so has part: feature:397940-397965:1:exon
so has part: feature:411273-411389:1:exon
so has part: feature:497125-497205:1:exon
so has part: feature:497974-498057:1:exon
so has part: feature:499908-500032:1:exon
so has part: feature:500786-500849:1:exon
so has part: feature:501879-502034:1:exon
so has part: feature:506322-506378:1:exon
so has part: feature:511696-511808:1:exon
so has part: feature:522764-522862:1:exon

XP_038024871.1
type: Protein
SIO_000068: ncbiprotein

position:380627:1
position: 380627
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:522862:1
position: 522862
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:380627-380660:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:387085-387190:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:397940-397965:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:411273-411389:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:497125-497205:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:497974-498057:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:499908-500032:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:500786-500849:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:501879-502034:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:506322-506378:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:511696-511808:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:522764-522862:1:exon

SKAP1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8839
gene: SKAP1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: src kinase-associated phosphoprotein 1 isoform X2
translation: MLPEEVRRLLEDAECYLADGLQNENLSPNAREQRDAILFSFQQVKARYHLEFLPRGEDQHDAGFGQDSSDENQSWSLAPSMTSDVSLPSDFLDDGLEEVTPRPVQDTGNILKQGYLEKRSRDHSFFGSEWQKRWCVLNKRTFFYYANEKSKQPKGTFSIEQYSARLAFHLRKDSRRRCCFELICPGKRTYEFTAPSPAEAEDWVDQIQFLMKDLSSLTIPYDEEDEEELYNDVDSSDSVTTASHNTTLNPDDGMEEDDVYEVFPGGPQRDYANYYQGMWDCSGEHPNELSFHRGDLIYILSKEYNMYGWWVGELNNTVGIVPKDYLVAAYDLEE
SIO_010081: SKAP1
subclass of: SO_0000673
so part of: SKAP1
location: join(380627..380660,387085..387190,397940..397965,411273..411389,497125..497205,497974..498057,499908..500032,500786..500849,501879..502034,511696..511808,522764..522862)
location: region:380627-522862:1
so has part: feature:380627-380660:1:exon
so has part: feature:387085-387190:1:exon
so has part: feature:397940-397965:1:exon
so has part: feature:411273-411389:1:exon
so has part: feature:497125-497205:1:exon
so has part: feature:497974-498057:1:exon
so has part: feature:499908-500032:1:exon
so has part: feature:500786-500849:1:exon
so has part: feature:501879-502034:1:exon
so has part: feature:511696-511808:1:exon
so has part: feature:522764-522862:1:exon

XP_038024872.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:380627-380660:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:387085-387190:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:397940-397965:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:411273-411389:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:497125-497205:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:497974-498057:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:499908-500032:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:500786-500849:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:501879-502034:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:511696-511808:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:522764-522862:1:exon

SKAP1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8839
gene: SKAP1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: src kinase-associated phosphoprotein 1 isoform X5
translation: MLPEEVRRLLEDAECYLADGLQNENLSPNAREQRDAILFSFQQVKARYHLEFLPRGEDQHDAGFGQDSSDENQSWSLAPSMTSDVSLPSDFLDDGLEEVTPRPVQDTGNILKQGYLEKRSRDHSFFGSEWQKRWCVLNKRTFFYYANEKSKQPKGTFSIEQYSARLAFHLRKDSRRRCCFELICPGKRTYEFTAPSPAEAEDWVDQIQFLMKDLSSLTIPYDEEDEEELYNDVDSSDSVTTASHNTTLNPDDGMEEDDVYEVFPGTPAVIPELSGSLCSVVPRRVCGKC
SIO_010081: SKAP1
subclass of: SO_0000673
so part of: SKAP1
location: join(380627..380660,387085..387190,397940..397965,411273..411389,497125..497205,497974..498057,499908..500032,500786..500849,501879..502034,503042..503118)
location: region:380627-503118:1
so has part: feature:380627-380660:1:exon
so has part: feature:387085-387190:1:exon
so has part: feature:397940-397965:1:exon
so has part: feature:411273-411389:1:exon
so has part: feature:497125-497205:1:exon
so has part: feature:497974-498057:1:exon
so has part: feature:499908-500032:1:exon
so has part: feature:500786-500849:1:exon
so has part: feature:501879-502034:1:exon
so has part: feature:503042-503118:1:exon

XP_038024875.1
type: Protein
SIO_000068: ncbiprotein

position:503118:1
position: 503118
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:380627-380660:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:387085-387190:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:397940-397965:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:411273-411389:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:497125-497205:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:497974-498057:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:499908-500032:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:500786-500849:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:501879-502034:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:503042-503118:1:exon

SKAP1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8839
gene: SKAP1
product: src kinase associated phosphoprotein 1, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 15 samples with support for all annotated introns
transcript id: XM_038168945.1
SIO_010081: SKAP1
subclass of: SO_0000673
so part of: SKAP1
location: join(405420..405480,411273..411389,497125..497205,497974..498057,499908..500032,500786..500849,501879..502034,506322..506378,511696..511808,522764..522881,523221..523449)
location: region:405420-523449:1
so has part: feature:405420-405480:1:exon
so has part: feature:411273-411389:1:exon
so has part: feature:497125-497205:1:exon
so has part: feature:497974-498057:1:exon
so has part: feature:499908-500032:1:exon
so has part: feature:500786-500849:1:exon
so has part: feature:501879-502034:1:exon
so has part: feature:506322-506378:1:exon
so has part: feature:511696-511808:1:exon
so has part: feature:522764-522881:1:exon
so has part: feature:523221-523449:1:exon

position:405420:1
position: 405420
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:405420-405480:1:exon

position:405480:1
position: 405480
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:411273-411389:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:497125-497205:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:497974-498057:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:499908-500032:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:500786-500849:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:501879-502034:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:506322-506378:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:511696-511808:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:522764-522881:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:523221-523449:1:exon

SKAP1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8839
gene: SKAP1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: src kinase-associated phosphoprotein 1 isoform X3
translation: MGKSPCEPSSFSVSLGEDQHDAGFGQDSSDENQSWSLAPSMTSDVSLPSDFLDDGLEEVTPRPVQDTGNILKQGYLEKRSRDHSFFGSEWQKRWCVLNKRTFFYYANEKSKQPKGTFSIEQYSARLAFHLRKDSRRRCCFELICPGKRTYEFTAPSPAEAEDWVDQIQFLMKDLSSLTIPYDEEDEEELYNDVDSSDSVTTASHNTTLNPDDGMEEDDVYEVFPEKEPSIPEDSEDSGSGQRNGGPQRDYANYYQGMWDCSGEHPNELSFHRGDLIYILSKEYNMYGWWVGELNNTVGIVPKDYLVAAYDLEE
SIO_010081: SKAP1
subclass of: SO_0000673
so part of: SKAP1
location: join(405435..405480,411273..411389,497125..497205,497974..498057,499908..500032,500786..500849,501879..502034,506322..506378,511696..511808,522764..522862)
location: region:405435-522862:1
so has part: feature:405435-405480:1:exon
so has part: feature:411273-411389:1:exon
so has part: feature:497125-497205:1:exon
so has part: feature:497974-498057:1:exon
so has part: feature:499908-500032:1:exon
so has part: feature:500786-500849:1:exon
so has part: feature:501879-502034:1:exon
so has part: feature:506322-506378:1:exon
so has part: feature:511696-511808:1:exon
so has part: feature:522764-522862:1:exon

XP_038024873.1
type: Protein
SIO_000068: ncbiprotein

position:405435:1
position: 405435
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:405435-405480:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:411273-411389:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:497125-497205:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:497974-498057:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:499908-500032:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:500786-500849:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:501879-502034:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:506322-506378:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:511696-511808:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:522764-522862:1:exon

SKAP1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8839
gene: SKAP1
product: src kinase associated phosphoprotein 1, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 12 samples with support for all annotated introns
transcript id: XM_038168946.1
SIO_010081: SKAP1
subclass of: SO_0000673
so part of: SKAP1
location: join(406238..406256,411273..411389,497125..497205,497974..498057,499908..500032,500786..500849,501879..502034,506322..506378,511696..511808,522764..522881,523221..523449)
location: region:406238-523449:1
so has part: feature:406238-406256:1:exon
so has part: feature:411273-411389:1:exon
so has part: feature:497125-497205:1:exon
so has part: feature:497974-498057:1:exon
so has part: feature:499908-500032:1:exon
so has part: feature:500786-500849:1:exon
so has part: feature:501879-502034:1:exon
so has part: feature:506322-506378:1:exon
so has part: feature:511696-511808:1:exon
so has part: feature:522764-522881:1:exon
so has part: feature:523221-523449:1:exon

position:406238:1
position: 406238
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:406238-406256:1:exon

position:406256:1
position: 406256
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:411273-411389:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:497125-497205:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:497974-498057:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:499908-500032:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:500786-500849:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:501879-502034:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:506322-506378:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:511696-511808:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:522764-522881:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:523221-523449:1:exon

SKAP1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8839
gene: SKAP1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: src kinase-associated phosphoprotein 1 isoform X4
translation: MREDQHDAGFGQDSSDENQSWSLAPSMTSDVSLPSDFLDDGLEEVTPRPVQDTGNILKQGYLEKRSRDHSFFGSEWQKRWCVLNKRTFFYYANEKSKQPKGTFSIEQYSARLAFHLRKDSRRRCCFELICPGKRTYEFTAPSPAEAEDWVDQIQFLMKDLSSLTIPYDEEDEEELYNDVDSSDSVTTASHNTTLNPDDGMEEDDVYEVFPEKEPSIPEDSEDSGSGQRNGGPQRDYANYYQGMWDCSGEHPNELSFHRGDLIYILSKEYNMYGWWVGELNNTVGIVPKDYLVAAYDLEE
SIO_010081: SKAP1
subclass of: SO_0000673
so part of: SKAP1
location: join(406253..406256,411273..411389,497125..497205,497974..498057,499908..500032,500786..500849,501879..502034,506322..506378,511696..511808,522764..522862)
location: region:406253-522862:1
so has part: feature:406253-406256:1:exon
so has part: feature:411273-411389:1:exon
so has part: feature:497125-497205:1:exon
so has part: feature:497974-498057:1:exon
so has part: feature:499908-500032:1:exon
so has part: feature:500786-500849:1:exon
so has part: feature:501879-502034:1:exon
so has part: feature:506322-506378:1:exon
so has part: feature:511696-511808:1:exon
so has part: feature:522764-522862:1:exon

XP_038024874.1
type: Protein
SIO_000068: ncbiprotein

position:406253:1
position: 406253
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:406253-406256:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:411273-411389:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:497125-497205:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:497974-498057:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:499908-500032:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:500786-500849:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:501879-502034:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:506322-506378:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:511696-511808:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:522764-522862:1:exon

LOC119714172
type: Gene
subclass of: SO_0000704
RO_0002162: 8839
gene: LOC119714172
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 441722..443216
location: region:441722-443216:1
so has part: feature:441722-443216:1:exon
subclass of: SO_0000011

119714172
type: Gene
SIO_000068: ncbigene

position:441722:1
position: 441722
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:443216:1
position: 443216
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:441722-443216:1:exon

LOC119714172
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 8839
nc RNA class: lncRNA
gene: LOC119714172
product: uncharacterized LOC119714172
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 9 samples with support for all annotated introns
transcript id: XR_005261275.1
SIO_010081: LOC119714172
subclass of: SO_0000673
so part of: LOC119714172
location: join(441722..442021,442452..443216)
location: region:441722-443216:1
so has part: feature:441722-442021:1:exon
so has part: feature:442452-443216:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:441722-442021:1:exon

position:442021:1
position: 442021
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:442452-443216:1:exon

position:442452:1
position: 442452
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

SNX11
type: Gene
subclass of: SO_0000704
RO_0002162: 8839
gene: SNX11
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(525709..531253)
location: region:525709-531253:-1
so has part: feature:525709-531253:-1:exon
subclass of: SO_0000010

119714171
type: Gene
SIO_000068: ncbigene

position:525709:-1
position: 525709
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:531253:-1
position: 531253
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:525709-531253:-1:exon

SNX11
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8839
gene: SNX11
product: sorting nexin 11
exception: unclassified transcription discrepancy
note: The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: deleted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 95% coverage of the annotated genomic feature by RNAseq alignments, including 13 samples with support for all annotated introns
transcript id: XM_038168957.1
SIO_010081: SNX11
subclass of: SO_0000673
so part of: SNX11
location: complement(join(525709..526759,527620..527832,528012..528111,528272..528372,528723..528809,531078..531253))
location: region:525709-531253:-1
so has part: feature:531078-531253:-1:exon
so has part: feature:528723-528809:-1:exon
so has part: feature:528272-528372:-1:exon
so has part: feature:528012-528111:-1:exon
so has part: feature:527620-527832:-1:exon
so has part: feature:525709-526759:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:531078-531253:-1:exon

position:531078:-1
position: 531078
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:528723-528809:-1:exon

position:528723:-1
position: 528723
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:528809:-1
position: 528809
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:528272-528372:-1:exon

position:528272:-1
position: 528272
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:528372:-1
position: 528372
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:528012-528111:-1:exon

position:528012:-1
position: 528012
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:528111:-1
position: 528111
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:527620-527832:-1:exon

position:527620:-1
position: 527620
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:527832:-1
position: 527832
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:525709-526759:-1:exon

position:526759:-1
position: 526759
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

SNX11
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8839
gene: SNX11
exception: unclassified translation discrepancy
note: The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: deleted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: LOW QUALITY PROTEIN: sorting nexin-11
translation: MTSWSAARRKRIRDTPKPLEKNSNCSGEPGGRRPSTEELTTVRVQDPRVQNEGSWNSYVDYKIFLHTNSKAFTAKTSCVRRRYREFVWLRRQLQKNAGLVPVPELPGKSPFFVGSTDEFIEKRRQGLQQFLEKVVQNVVLLSDSRLHLFLQSQLSVPEIEACVQGRGTQTVTDAILHYAMSNCGWAQEEESRPALLPGGALRGSYASLGGPQGPGCLEPLPHWSDFGMDESCSDSPAEPAEPLGGPQEGQ
SIO_010081: SNX11
subclass of: SO_0000673
so part of: SNX11
location: complement(join(526618..526759,527620..527832,528012..528111,528272..528372,528723..528809,531078..531188))
location: region:526618-531188:-1
so has part: feature:531078-531188:-1:exon
so has part: feature:528723-528809:-1:exon
so has part: feature:528272-528372:-1:exon
so has part: feature:528012-528111:-1:exon
so has part: feature:527620-527832:-1:exon
so has part: feature:526618-526759:-1:exon

XP_038024885.1
type: Protein
SIO_000068: ncbiprotein

position:526618:-1
position: 526618
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:531188:-1
position: 531188
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:531078-531188:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:528723-528809:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:528272-528372:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:528012-528111:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:527620-527832:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:526618-526759:-1:exon

CBX1
type: Gene
subclass of: SO_0000704
RO_0002162: 8839
gene: CBX1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 529952..537212
location: region:529952-537212:1
so has part: feature:529952-537212:1:exon
subclass of: SO_0000010

119714169
type: Gene
SIO_000068: ncbigene

position:529952:1
position: 529952
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:537212:1
position: 537212
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:529952-537212:1:exon

CBX1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8839
gene: CBX1
product: chromobox 1, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 11 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 126 samples with support for all annotated introns
transcript id: XM_038168948.1
SIO_010081: CBX1
subclass of: SO_0000673
so part of: CBX1
location: join(529952..530102,533571..533746,534199..534376,534892..534986,535620..537212)
location: region:529952-537212:1
so has part: feature:529952-530102:1:exon
so has part: feature:533571-533746:1:exon
so has part: feature:534199-534376:1:exon
so has part: feature:534892-534986:1:exon
so has part: feature:535620-537212:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:529952-530102:1:exon

position:530102:1
position: 530102
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:533571-533746:1:exon

position:533571:1
position: 533571
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:533746:1
position: 533746
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:534199-534376:1:exon

position:534199:1
position: 534199
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:534376:1
position: 534376
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:534892-534986:1:exon

position:534892:1
position: 534892
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:534986:1
position: 534986
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:535620-537212:1:exon

position:535620:1
position: 535620
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

CBX1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8839
gene: CBX1
product: chromobox 1, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 11 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 126 samples with support for all annotated introns
transcript id: XM_038168949.1
SIO_010081: CBX1
subclass of: SO_0000673
so part of: CBX1
location: join(529969..530102,533574..533746,534199..534376,534892..534986,535620..537212)
location: region:529969-537212:1
so has part: feature:529969-530102:1:exon
so has part: feature:533574-533746:1:exon
so has part: feature:534199-534376:1:exon
so has part: feature:534892-534986:1:exon
so has part: feature:535620-537212:1:exon

position:529969:1
position: 529969
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:529969-530102:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:533574-533746:1:exon

position:533574:1
position: 533574
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:534199-534376:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:534892-534986:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:535620-537212:1:exon

CBX1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8839
gene: CBX1
product: chromobox 1, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 11 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 74 samples with support for all annotated introns
transcript id: XM_038168950.1
SIO_010081: CBX1
subclass of: SO_0000673
so part of: CBX1
location: join(531339..531638,533571..533746,534199..534376,534892..534986,535620..537212)
location: region:531339-537212:1
so has part: feature:531339-531638:1:exon
so has part: feature:533571-533746:1:exon
so has part: feature:534199-534376:1:exon
so has part: feature:534892-534986:1:exon
so has part: feature:535620-537212:1:exon

position:531339:1
position: 531339
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:531339-531638:1:exon

position:531638:1
position: 531638
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:533571-533746:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:534199-534376:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:534892-534986:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:535620-537212:1:exon

CBX1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8839
gene: CBX1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: chromobox protein homolog 1
translation: MGKKQNKKKVEEVLEEEEEEYVVEKVLDRRVVKGKVEYLLKWKGFSDEDNTWEPEENLDCPDLIAEFLQSQKTAHESEKSEGSKRKAESDTEDKGEESKPKKKKEESEKPRGFARGFEPERIIGATDSSGELMFLMKWKNSDEADLVPAKEANIKCPQVVISFYEERLTWHSYPSEDDDKKEDKN
SIO_010081: CBX1
subclass of: SO_0000673
so part of: CBX1
location: join(533607..533746,534199..534376,534892..534986,535620..535764)
location: region:533607-535764:1
so has part: feature:533607-533746:1:exon
so has part: feature:534199-534376:1:exon
so has part: feature:534892-534986:1:exon
so has part: feature:535620-535764:1:exon

XP_038024876.1
type: Protein
SIO_000068: ncbiprotein

position:533607:1
position: 533607
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:535764:1
position: 535764
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:533607-533746:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:534199-534376:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:534892-534986:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:535620-535764:1:exon

CBX1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8839
gene: CBX1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: chromobox protein homolog 1
translation: MGKKQNKKKVEEVLEEEEEEYVVEKVLDRRVVKGKVEYLLKWKGFSDEDNTWEPEENLDCPDLIAEFLQSQKTAHESEKSEGSKRKAESDTEDKGEESKPKKKKEESEKPRGFARGFEPERIIGATDSSGELMFLMKWKNSDEADLVPAKEANIKCPQVVISFYEERLTWHSYPSEDDDKKEDKN
SIO_010081: CBX1
subclass of: SO_0000673
so part of: CBX1
location: join(533607..533746,534199..534376,534892..534986,535620..535764)
location: region:533607-535764:1
so has part: feature:533607-533746:1:exon
so has part: feature:534199-534376:1:exon
so has part: feature:534892-534986:1:exon
so has part: feature:535620-535764:1:exon

XP_038024877.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:533607-533746:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:534199-534376:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:534892-534986:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:535620-535764:1:exon

CBX1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8839
gene: CBX1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: chromobox protein homolog 1
translation: MGKKQNKKKVEEVLEEEEEEYVVEKVLDRRVVKGKVEYLLKWKGFSDEDNTWEPEENLDCPDLIAEFLQSQKTAHESEKSEGSKRKAESDTEDKGEESKPKKKKEESEKPRGFARGFEPERIIGATDSSGELMFLMKWKNSDEADLVPAKEANIKCPQVVISFYEERLTWHSYPSEDDDKKEDKN
SIO_010081: CBX1
subclass of: SO_0000673
so part of: CBX1
location: join(533607..533746,534199..534376,534892..534986,535620..535764)
location: region:533607-535764:1
so has part: feature:533607-533746:1:exon
so has part: feature:534199-534376:1:exon
so has part: feature:534892-534986:1:exon
so has part: feature:535620-535764:1:exon

XP_038024878.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:533607-533746:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:534199-534376:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:534892-534986:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:535620-535764:1:exon

NFE2L1
type: Gene
subclass of: SO_0000704
RO_0002162: 8839
gene: NFE2L1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(539875..549169)
location: region:539875-549169:-1
so has part: feature:539875-549169:-1:exon
subclass of: SO_0000010

119714167
type: Gene
SIO_000068: ncbigene

position:539875:-1
position: 539875
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:549169:-1
position: 549169
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:539875-549169:-1:exon

NFE2L1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8839
gene: NFE2L1
product: nuclear factor, erythroid 2 like 1, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 123 samples with support for all annotated introns
transcript id: XM_038168942.1
SIO_010081: NFE2L1
subclass of: SO_0000673
so part of: NFE2L1
location: complement(join(539875..543055,543499..543660,544035..544124,544691..544873,547978..548489,549019..549169))
location: region:539875-549169:-1
so has part: feature:549019-549169:-1:exon
so has part: feature:547978-548489:-1:exon
so has part: feature:544691-544873:-1:exon
so has part: feature:544035-544124:-1:exon
so has part: feature:543499-543660:-1:exon
so has part: feature:539875-543055:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:549019-549169:-1:exon

position:549019:-1
position: 549019
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:547978-548489:-1:exon

position:547978:-1
position: 547978
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:548489:-1
position: 548489
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:544691-544873:-1:exon

position:544691:-1
position: 544691
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:544873:-1
position: 544873
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:544035-544124:-1:exon

position:544035:-1
position: 544035
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:544124:-1
position: 544124
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:543499-543660:-1:exon

position:543499:-1
position: 543499
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:543660:-1
position: 543660
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:539875-543055:-1:exon

position:543055:-1
position: 543055
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

NFE2L1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8839
gene: NFE2L1
product: nuclear factor, erythroid 2 like 1, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 126 samples with support for all annotated introns
transcript id: XM_038168940.1
SIO_010081: NFE2L1
subclass of: SO_0000673
so part of: NFE2L1
location: complement(join(539875..543055,543499..543660,544035..544124,544691..544906,547978..548489,549019..549169))
location: region:539875-549169:-1
so has part: feature:549019-549169:-1:exon
so has part: feature:547978-548489:-1:exon
so has part: feature:544691-544906:-1:exon
so has part: feature:544035-544124:-1:exon
so has part: feature:543499-543660:-1:exon
so has part: feature:539875-543055:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:549019-549169:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:547978-548489:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:544691-544906:-1:exon

position:544906:-1
position: 544906
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:544035-544124:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:543499-543660:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:539875-543055:-1:exon

NFE2L1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8839
gene: NFE2L1
product: nuclear factor, erythroid 2 like 1, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 99 samples with support for all annotated introns
transcript id: XM_038168941.1
SIO_010081: NFE2L1
subclass of: SO_0000673
so part of: NFE2L1
location: complement(join(539875..543055,543499..543660,544035..544124,544691..544906,547978..548489,548791..548885))
location: region:539875-548885:-1
so has part: feature:548791-548885:-1:exon
so has part: feature:547978-548489:-1:exon
so has part: feature:544691-544906:-1:exon
so has part: feature:544035-544124:-1:exon
so has part: feature:543499-543660:-1:exon
so has part: feature:539875-543055:-1:exon

position:548885:-1
position: 548885
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:548791-548885:-1:exon

position:548791:-1
position: 548791
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:547978-548489:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:544691-544906:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:544035-544124:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:543499-543660:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:539875-543055:-1:exon

NFE2L1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8839
gene: NFE2L1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: endoplasmic reticulum membrane sensor NFE2L1 isoform X2
translation: MLSLKKYFTEGLIQFTILLSLIGVRVDVDTYLTSQLPPLREIILGQSSAYTQTQFHNLRNTLDGYGIHPKSVDLDYYFTARRLLNQVRALDRFQVPTTEVSAWLVHRDPEGSVSGTQPSAGIALENGGGLQDGSGPDGSVRESGAEQGFGEELEDLGAVAPPVNGDLTKEDIDLGAGREIFDYSHRQKESEVDKELSDGRERGDGWRSAGSQGLDRNLLVDGETGESFPAQVPGAEDQTALSLEECLRLLEATFPFGENSEFPAADVSTLSEAVPSESRPAGIQSSLLSPLLPETESPFDLEQQWQDLMSIMEMQAMEVNNTTAETLYNGTGGDLLASNYSLAPNTPINQNVSLHQASLGSCSQDFSLFSSEIESPSMAGSSALLQLAPDNSTGLNTTFSSTNLSGIFFPPQLNSTVNETAGPELPDPLGGLLDEAMLDEISLMDLAIEEGFNPVQASQLEEEFDSDSGLSLDSGHSPASLSSSEASSSSSSSSSSSSSSSSSSSSSFSEEGAVGYSSDSENVDFEETEGAVGYQPEYSKFCRMSYQDPSQLHYLPYLEHVGHNHTYNMAPGALDPEEPKLPSAGKKSSKEKPSEFLDKQMSRDEHRARAMKIPFTNDKIINLPVEEFNELLSKYQLSEAQLSLIRDIRRRGKNKMAAQNCRKRKLDTILNLERDVEDLQRDKSKLLREKVEFLKSIRQMKQKVQNLYQEVFGRLRDENGQPYSPNQYALQYASDGSVILIPRSLADQQARRQERKQKDRRK
SIO_010081: NFE2L1
subclass of: SO_0000673
so part of: NFE2L1
location: complement(join(541712..543055,543499..543660,544035..544124,544691..544873,547978..548487))
location: region:541712-548487:-1
so has part: feature:547978-548487:-1:exon
so has part: feature:544691-544873:-1:exon
so has part: feature:544035-544124:-1:exon
so has part: feature:543499-543660:-1:exon
so has part: feature:541712-543055:-1:exon

XP_038024870.1
type: Protein
SIO_000068: ncbiprotein

position:541712:-1
position: 541712
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:548487:-1
position: 548487
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:547978-548487:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:544691-544873:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:544035-544124:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:543499-543660:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:541712-543055:-1:exon

NFE2L1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8839
gene: NFE2L1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: endoplasmic reticulum membrane sensor NFE2L1 isoform X1
translation: MLSLKKYFTEGLIQFTILLSLIGVRVDVDTYLTSQLPPLREIILGQSSAYTQTQFHNLRNTLDGYGIHPKSVDLDYYFTARRLLNQVRALDRFQVPTTEVSAWLVHRDPEGSVSGTQPSAGIALENGGGLQDGSGPDGSVRESGAEQGFGEELEDLGAVAPPVNGDLTKEDIDLIDILWRQDIDLGAGREIFDYSHRQKESEVDKELSDGRERGDGWRSAGSQGLDRNLLVDGETGESFPAQVPGAEDQTALSLEECLRLLEATFPFGENSEFPAADVSTLSEAVPSESRPAGIQSSLLSPLLPETESPFDLEQQWQDLMSIMEMQAMEVNNTTAETLYNGTGGDLLASNYSLAPNTPINQNVSLHQASLGSCSQDFSLFSSEIESPSMAGSSALLQLAPDNSTGLNTTFSSTNLSGIFFPPQLNSTVNETAGPELPDPLGGLLDEAMLDEISLMDLAIEEGFNPVQASQLEEEFDSDSGLSLDSGHSPASLSSSEASSSSSSSSSSSSSSSSSSSSSFSEEGAVGYSSDSENVDFEETEGAVGYQPEYSKFCRMSYQDPSQLHYLPYLEHVGHNHTYNMAPGALDPEEPKLPSAGKKSSKEKPSEFLDKQMSRDEHRARAMKIPFTNDKIINLPVEEFNELLSKYQLSEAQLSLIRDIRRRGKNKMAAQNCRKRKLDTILNLERDVEDLQRDKSKLLREKVEFLKSIRQMKQKVQNLYQEVFGRLRDENGQPYSPNQYALQYASDGSVILIPRSLADQQARRQERKQKDRRK
SIO_010081: NFE2L1
subclass of: SO_0000673
so part of: NFE2L1
location: complement(join(541712..543055,543499..543660,544035..544124,544691..544906,547978..548487))
location: region:541712-548487:-1
so has part: feature:547978-548487:-1:exon
so has part: feature:544691-544906:-1:exon
so has part: feature:544035-544124:-1:exon
so has part: feature:543499-543660:-1:exon
so has part: feature:541712-543055:-1:exon

XP_038024868.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:547978-548487:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:544691-544906:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:544035-544124:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:543499-543660:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:541712-543055:-1:exon

NFE2L1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8839
gene: NFE2L1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: endoplasmic reticulum membrane sensor NFE2L1 isoform X1
translation: MLSLKKYFTEGLIQFTILLSLIGVRVDVDTYLTSQLPPLREIILGQSSAYTQTQFHNLRNTLDGYGIHPKSVDLDYYFTARRLLNQVRALDRFQVPTTEVSAWLVHRDPEGSVSGTQPSAGIALENGGGLQDGSGPDGSVRESGAEQGFGEELEDLGAVAPPVNGDLTKEDIDLIDILWRQDIDLGAGREIFDYSHRQKESEVDKELSDGRERGDGWRSAGSQGLDRNLLVDGETGESFPAQVPGAEDQTALSLEECLRLLEATFPFGENSEFPAADVSTLSEAVPSESRPAGIQSSLLSPLLPETESPFDLEQQWQDLMSIMEMQAMEVNNTTAETLYNGTGGDLLASNYSLAPNTPINQNVSLHQASLGSCSQDFSLFSSEIESPSMAGSSALLQLAPDNSTGLNTTFSSTNLSGIFFPPQLNSTVNETAGPELPDPLGGLLDEAMLDEISLMDLAIEEGFNPVQASQLEEEFDSDSGLSLDSGHSPASLSSSEASSSSSSSSSSSSSSSSSSSSSFSEEGAVGYSSDSENVDFEETEGAVGYQPEYSKFCRMSYQDPSQLHYLPYLEHVGHNHTYNMAPGALDPEEPKLPSAGKKSSKEKPSEFLDKQMSRDEHRARAMKIPFTNDKIINLPVEEFNELLSKYQLSEAQLSLIRDIRRRGKNKMAAQNCRKRKLDTILNLERDVEDLQRDKSKLLREKVEFLKSIRQMKQKVQNLYQEVFGRLRDENGQPYSPNQYALQYASDGSVILIPRSLADQQARRQERKQKDRRK
SIO_010081: NFE2L1
subclass of: SO_0000673
so part of: NFE2L1
location: complement(join(541712..543055,543499..543660,544035..544124,544691..544906,547978..548487))
location: region:541712-548487:-1
so has part: feature:547978-548487:-1:exon
so has part: feature:544691-544906:-1:exon
so has part: feature:544035-544124:-1:exon
so has part: feature:543499-543660:-1:exon
so has part: feature:541712-543055:-1:exon

XP_038024869.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:547978-548487:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:544691-544906:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:544035-544124:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:543499-543660:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:541712-543055:-1:exon

COPZ2
type: Gene
subclass of: SO_0000704
RO_0002162: 8839
gene: COPZ2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 550107..552489
location: region:550107-552489:1
so has part: feature:550107-552489:1:exon
subclass of: SO_0000010

119714170
type: Gene
SIO_000068: ncbigene

position:550107:1
position: 550107
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:552489:1
position: 552489
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:550107-552489:1:exon

COPZ2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8839
gene: COPZ2
product: COPI coat complex subunit zeta 2, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 15 samples with support for all annotated introns
transcript id: XM_038168952.1
SIO_010081: COPZ2
subclass of: SO_0000673
so part of: COPZ2
location: join(550107..550467,550832..550900,551010..551091,551196..551287,551355..551411,551537..551610,551979..552489)
location: region:550107-552489:1
so has part: feature:550107-550467:1:exon
so has part: feature:550832-550900:1:exon
so has part: feature:551010-551091:1:exon
so has part: feature:551196-551287:1:exon
so has part: feature:551355-551411:1:exon
so has part: feature:551537-551610:1:exon
so has part: feature:551979-552489:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:550107-550467:1:exon

position:550467:1
position: 550467
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:550832-550900:1:exon

position:550832:1
position: 550832
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:550900:1
position: 550900
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:551010-551091:1:exon

position:551010:1
position: 551010
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:551091:1
position: 551091
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:551196-551287:1:exon

position:551196:1
position: 551196
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:551287:1
position: 551287
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:551355-551411:1:exon

position:551355:1
position: 551355
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:551411:1
position: 551411
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:551537-551610:1:exon

position:551537:1
position: 551537
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:551610:1
position: 551610
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:551979-552489:1:exon

position:551979:1
position: 551979
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

COPZ2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8839
gene: COPZ2
product: COPI coat complex subunit zeta 2, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 14 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 75 samples with support for all annotated introns
transcript id: XM_038168953.1
SIO_010081: COPZ2
subclass of: SO_0000673
so part of: COPZ2
location: join(550107..550467,550832..550900,551010..551091,551196..551287,551533..551610,551855..551906,551990..552474)
location: region:550107-552474:1
so has part: feature:550107-550467:1:exon
so has part: feature:550832-550900:1:exon
so has part: feature:551010-551091:1:exon
so has part: feature:551196-551287:1:exon
so has part: feature:551533-551610:1:exon
so has part: feature:551855-551906:1:exon
so has part: feature:551990-552474:1:exon

position:552474:1
position: 552474
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:550107-550467:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:550832-550900:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:551010-551091:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:551196-551287:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:551533-551610:1:exon

position:551533:1
position: 551533
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:551855-551906:1:exon

position:551855:1
position: 551855
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:551906:1
position: 551906
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:551990-552474:1:exon

position:551990:1
position: 551990
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

COPZ2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8839
gene: COPZ2
product: COPI coat complex subunit zeta 2, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 14 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 111 samples with support for all annotated introns
transcript id: XM_038168951.1
SIO_010081: COPZ2
subclass of: SO_0000673
so part of: COPZ2
location: join(550107..550467,550832..550900,551010..551091,551196..551287,551355..551411,551533..551610,551855..551906,551990..552450)
location: region:550107-552450:1
so has part: feature:550107-550467:1:exon
so has part: feature:550832-550900:1:exon
so has part: feature:551010-551091:1:exon
so has part: feature:551196-551287:1:exon
so has part: feature:551355-551411:1:exon
so has part: feature:551533-551610:1:exon
so has part: feature:551855-551906:1:exon
so has part: feature:551990-552450:1:exon

position:552450:1
position: 552450
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:550107-550467:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:550832-550900:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:551010-551091:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:551196-551287:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:551355-551411:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:551533-551610:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:551855-551906:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:551990-552450:1:exon

COPZ2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8839
gene: COPZ2
product: COPI coat complex subunit zeta 2, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 15 samples with support for all annotated introns
transcript id: XM_038168954.1
SIO_010081: COPZ2
subclass of: SO_0000673
so part of: COPZ2
location: join(550107..550467,550832..550900,551010..551091,551196..551287,551355..551411,551533..551610,551979..552277)
location: region:550107-552277:1
so has part: feature:550107-550467:1:exon
so has part: feature:550832-550900:1:exon
so has part: feature:551010-551091:1:exon
so has part: feature:551196-551287:1:exon
so has part: feature:551355-551411:1:exon
so has part: feature:551533-551610:1:exon
so has part: feature:551979-552277:1:exon

position:552277:1
position: 552277
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:550107-550467:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:550832-550900:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:551010-551091:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:551196-551287:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:551355-551411:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:551533-551610:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:551979-552277:1:exon

COPZ2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8839
gene: COPZ2
product: COPI coat complex subunit zeta 2, transcript variant X5
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 9 samples with support for all annotated introns
transcript id: XM_038168955.1
SIO_010081: COPZ2
subclass of: SO_0000673
so part of: COPZ2
location: join(550107..550467,550832..550900,551010..551091,551196..551287,551533..551610,551979..552277)
location: region:550107-552277:1
so has part: feature:550107-550467:1:exon
so has part: feature:550832-550900:1:exon
so has part: feature:551010-551091:1:exon
so has part: feature:551196-551287:1:exon
so has part: feature:551533-551610:1:exon
so has part: feature:551979-552277:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:550107-550467:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:550832-550900:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:551010-551091:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:551196-551287:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:551533-551610:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:551979-552277:1:exon

COPZ2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8839
gene: COPZ2
product: COPI coat complex subunit zeta 2, transcript variant X6
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 14 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 111 samples with support for all annotated introns
transcript id: XM_038168956.1
SIO_010081: COPZ2
subclass of: SO_0000673
so part of: COPZ2
location: join(550107..550467,550832..550900,551010..551091,551196..551287,551355..551411,551537..551610,551855..551906,551990..552216)
location: region:550107-552216:1
so has part: feature:550107-550467:1:exon
so has part: feature:550832-550900:1:exon
so has part: feature:551010-551091:1:exon
so has part: feature:551196-551287:1:exon
so has part: feature:551355-551411:1:exon
so has part: feature:551537-551610:1:exon
so has part: feature:551855-551906:1:exon
so has part: feature:551990-552216:1:exon

position:552216:1
position: 552216
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:550107-550467:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:550832-550900:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:551010-551091:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:551196-551287:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:551355-551411:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:551537-551610:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:551855-551906:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:551990-552216:1:exon

COPZ2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8839
gene: COPZ2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: coatomer subunit zeta-2 isoform X1
translation: MEPTGLPEPSLYTVKALLVLDSHGQRLLAKYYDGSFPTAQEQAAFESSIFSKTRGAGGEITCLDGLTVVYRSSSDLLFCVVGGPQENELMLSAVLGCLCDALRPRAAEGLGEALAAGEPGRGLPGAGRDRGQGGDPGERPPARAAAPGPAGPRARSLRLRALRLPGGQPRAGGRGGRRPPQVEAPRGCSPPPVAPSQLPPPALGTAREPLRIPETRLAALLPPRWAPVDPKRLRAAPNKAAAPSAPTPASAPLILGGSALPRPPPSAPTRGV
SIO_010081: COPZ2
subclass of: SO_0000673
so part of: COPZ2
location: join(550447..550467,550832..550900,551010..551091,551196..551287,551355..551411,551533..551610,551855..551906,551990..552357)
location: region:550447-552357:1
so has part: feature:550447-550467:1:exon
so has part: feature:550832-550900:1:exon
so has part: feature:551010-551091:1:exon
so has part: feature:551196-551287:1:exon
so has part: feature:551355-551411:1:exon
so has part: feature:551533-551610:1:exon
so has part: feature:551855-551906:1:exon
so has part: feature:551990-552357:1:exon

XP_038024879.1
type: Protein
SIO_000068: ncbiprotein

position:550447:1
position: 550447
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:552357:1
position: 552357
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:550447-550467:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:550832-550900:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:551010-551091:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:551196-551287:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:551355-551411:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:551533-551610:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:551855-551906:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:551990-552357:1:exon

COPZ2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8839
gene: COPZ2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: coatomer subunit zeta-2 isoform X2
translation: MEPTGLPEPSLYTVKALLVLDSHGQRLLAKYYDGSFPTAQEQAAFESSIFSKTRGAGGEITCLDGLTVVYRSSSDLLFCVVGGPQENELMLSAVLGCLCDALRPRAADLEKRWLLENLDGAFLVLDEIVDRGLSAGPRARSLRLRALRLPGGQPRAGGRGGRRPPQVEAPRGCSPPPVAPSQLPPPALGTAREPLRIPETRLAALLPPRWAPVDPKRLRAAPNKAAAPSAPTPASAPLILGGSALPRPPPSAPTRGV
SIO_010081: COPZ2
subclass of: SO_0000673
so part of: COPZ2
location: join(550447..550467,550832..550900,551010..551091,551196..551287,551355..551411,551537..551610,551979..552357)
location: region:550447-552357:1
so has part: feature:550447-550467:1:exon
so has part: feature:550832-550900:1:exon
so has part: feature:551010-551091:1:exon
so has part: feature:551196-551287:1:exon
so has part: feature:551355-551411:1:exon
so has part: feature:551537-551610:1:exon
so has part: feature:551979-552357:1:exon

XP_038024880.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:550447-550467:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:550832-550900:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:551010-551091:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:551196-551287:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:551355-551411:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:551537-551610:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:551979-552357:1:exon

COPZ2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8839
gene: COPZ2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: coatomer subunit zeta-2 isoform X3
translation: MEPTGLPEPSLYTVKALLVLDSHGQRLLAKYYDGSFPTAQEQAAFESSIFSKTRGAGGEITCLDGLTVVYRSSSDLLFCVVGGPQENEEGLGEALAAGEPGRGLPGAGRDRGQGGDPGERPPARAAAPGPAGPRARSLRLRALRLPGGQPRAGGRGGRRPPQVEAPRGCSPPPVAPSQLPPPALGTAREPLRIPETRLAALLPPRWAPVDPKRLRAAPNKAAAPSAPTPASAPLILGGSALPRPPPSAPTRGV
SIO_010081: COPZ2
subclass of: SO_0000673
so part of: COPZ2
location: join(550447..550467,550832..550900,551010..551091,551196..551287,551533..551610,551855..551906,551990..552357)
location: region:550447-552357:1
so has part: feature:550447-550467:1:exon
so has part: feature:550832-550900:1:exon
so has part: feature:551010-551091:1:exon
so has part: feature:551196-551287:1:exon
so has part: feature:551533-551610:1:exon
so has part: feature:551855-551906:1:exon
so has part: feature:551990-552357:1:exon

XP_038024881.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:550447-550467:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:550832-550900:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:551010-551091:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:551196-551287:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:551533-551610:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:551855-551906:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:551990-552357:1:exon

COPZ2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8839
gene: COPZ2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: coatomer subunit zeta-2 isoform X4
translation: MEPTGLPEPSLYTVKALLVLDSHGQRLLAKYYDGSFPTAQEQAAFESSIFSKTRGAGGEITCLDGLTVVYRSSSDLLFCVVGGPQENELMLSAVLGCLCDALRPRAAEGLGEALAAGEPGRGLPGAGRDRGQGPLRRPPSPLPTASCSSITWRAAASRGARGAPTPPSRSTQGLQPPPGGPEPAPTPGVRNSEGTAQDPGDQVGRPPAPPLGPRGSQTAPGCPQ
SIO_010081: COPZ2
subclass of: SO_0000673
so part of: COPZ2
location: join(550447..550467,550832..550900,551010..551091,551196..551287,551355..551411,551533..551610,551979..552254)
location: region:550447-552254:1
so has part: feature:550447-550467:1:exon
so has part: feature:550832-550900:1:exon
so has part: feature:551010-551091:1:exon
so has part: feature:551196-551287:1:exon
so has part: feature:551355-551411:1:exon
so has part: feature:551533-551610:1:exon
so has part: feature:551979-552254:1:exon

XP_038024882.1
type: Protein
SIO_000068: ncbiprotein

position:552254:1
position: 552254
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:550447-550467:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:550832-550900:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:551010-551091:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:551196-551287:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:551355-551411:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:551533-551610:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:551979-552254:1:exon

COPZ2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8839
gene: COPZ2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: coatomer subunit zeta-2 isoform X5
translation: MEPTGLPEPSLYTVKALLVLDSHGQRLLAKYYDGSFPTAQEQAAFESSIFSKTRGAGGEITCLDGLTVVYRSSSDLLFCVVGGPQENEEGLGEALAAGEPGRGLPGAGRDRGQGPLRRPPSPLPTASCSSITWRAAASRGARGAPTPPSRSTQGLQPPPGGPEPAPTPGVRNSEGTAQDPGDQVGRPPAPPLGPRGSQTAPGCPQ
SIO_010081: COPZ2
subclass of: SO_0000673
so part of: COPZ2
location: join(550447..550467,550832..550900,551010..551091,551196..551287,551533..551610,551979..552254)
location: region:550447-552254:1
so has part: feature:550447-550467:1:exon
so has part: feature:550832-550900:1:exon
so has part: feature:551010-551091:1:exon
so has part: feature:551196-551287:1:exon
so has part: feature:551533-551610:1:exon
so has part: feature:551979-552254:1:exon

XP_038024883.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:550447-550467:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:550832-550900:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:551010-551091:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:551196-551287:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:551533-551610:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:551979-552254:1:exon

COPZ2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8839
gene: COPZ2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: coatomer subunit zeta-2 isoform X6
translation: MEPTGLPEPSLYTVKALLVLDSHGQRLLAKYYDGSFPTAQEQAAFESSIFSKTRGAGGEITCLDGLTVVYRSSSDLLFCVVGGPQENELMLSAVLGCLCDALRPRAADLEKRWLLENLDGAFLVLDEIVDRGVILESDPQRVLQRLGPRAPEPAPYGFVLFDYLAGSREQGGAGGADPPK
SIO_010081: COPZ2
subclass of: SO_0000673
so part of: COPZ2
location: join(550447..550467,550832..550900,551010..551091,551196..551287,551355..551411,551537..551610,551855..551906,551990..552085)
location: region:550447-552085:1
so has part: feature:550447-550467:1:exon
so has part: feature:550832-550900:1:exon
so has part: feature:551010-551091:1:exon
so has part: feature:551196-551287:1:exon
so has part: feature:551355-551411:1:exon
so has part: feature:551537-551610:1:exon
so has part: feature:551855-551906:1:exon
so has part: feature:551990-552085:1:exon

XP_038024884.1
type: Protein
SIO_000068: ncbiprotein

position:552085:1
position: 552085
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:550447-550467:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:550832-550900:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:551010-551091:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:551196-551287:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:551355-551411:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:551537-551610:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:551855-551906:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:551990-552085:1:exon

CDK5RAP3
type: Gene
subclass of: SO_0000704
RO_0002162: 8839
gene: CDK5RAP3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(553330..556658)
location: region:553330-556658:-1
so has part: feature:553330-556658:-1:exon
subclass of: SO_0000010

119714089
type: Gene
SIO_000068: ncbigene

position:553330:-1
position: 553330
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:556658:-1
position: 556658
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:553330-556658:-1:exon

CDK5RAP3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8839
gene: CDK5RAP3
product: CDK5 regulatory subunit associated protein 3
exception: unclassified transcription discrepancy
note: The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: inserted 1 base in 1 codon; deleted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 93% coverage of the annotated genomic feature by RNAseq alignments, including 125 samples with support for all annotated introns
transcript id: XM_038168835.1
SIO_010081: CDK5RAP3
subclass of: SO_0000673
so part of: CDK5RAP3
location: complement(join(553330..553505,553576..553747,553852..554057,554143..554231,554393..554468,554546..554656,554949..555094,555213..555348,555524..555702,555794..555842,555925..556025,556121..556252,556406..556463,556575..556658))
location: region:553330-556658:-1
so has part: feature:556575-556658:-1:exon
so has part: feature:556406-556463:-1:exon
so has part: feature:556121-556252:-1:exon
so has part: feature:555925-556025:-1:exon
so has part: feature:555794-555842:-1:exon
so has part: feature:555524-555702:-1:exon
so has part: feature:555213-555348:-1:exon
so has part: feature:554949-555094:-1:exon
so has part: feature:554546-554656:-1:exon
so has part: feature:554393-554468:-1:exon
so has part: feature:554143-554231:-1:exon
so has part: feature:553852-554057:-1:exon
so has part: feature:553576-553747:-1:exon
so has part: feature:553330-553505:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:556575-556658:-1:exon

position:556575:-1
position: 556575
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:556406-556463:-1:exon

position:556406:-1
position: 556406
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:556463:-1
position: 556463
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:556121-556252:-1:exon

position:556121:-1
position: 556121
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:556252:-1
position: 556252
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:555925-556025:-1:exon

position:555925:-1
position: 555925
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:556025:-1
position: 556025
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:555794-555842:-1:exon

position:555794:-1
position: 555794
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:555842:-1
position: 555842
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:555524-555702:-1:exon

position:555524:-1
position: 555524
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:555702:-1
position: 555702
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:555213-555348:-1:exon

position:555213:-1
position: 555213
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:555348:-1
position: 555348
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:554949-555094:-1:exon

position:554949:-1
position: 554949
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:555094:-1
position: 555094
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:554546-554656:-1:exon

position:554546:-1
position: 554546
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:554656:-1
position: 554656
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:554393-554468:-1:exon

position:554393:-1
position: 554393
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:554468:-1
position: 554468
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:554143-554231:-1:exon

position:554143:-1
position: 554143
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:554231:-1
position: 554231
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:553852-554057:-1:exon

position:553852:-1
position: 553852
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:554057:-1
position: 554057
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:553576-553747:-1:exon

position:553576:-1
position: 553576
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:553747:-1
position: 553747
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:553330-553505:-1:exon

position:553505:-1
position: 553505
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

CDK5RAP3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8839
gene: CDK5RAP3
exception: unclassified translation discrepancy
note: The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: inserted 1 base in 1 codon; deleted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: LOW QUALITY PROTEIN: CDK5 regulatory subunit-associated protein 3
translation: MQAPPQDYRDVPIDIQTSKLLDWLLDRRHCGRRWQAQARLVRQRMEAALRDMPEHPEIRQLLAGSALHYFHCLRIVEILRGTEASTRNLFGRYSSQRMKDWQEIVALYEKENTYLAELASLLVRSVSYEAPALRKQISRCQQAQQDFARREEECQLAAAELRERFYASCKQYGITGDNVRQELLALVKELPSLLSEIGAGASALTEXIELYEACVEFVCESSAEPVLPLLRHVGRRGNTTVYEWRTGLEPVRVERPEVQEVPEQPKEDAIDWGDFTLEPSGTSDGAATGGAQDEIDWGITLEPSPQQDDGIDWGDGDGDGAQIAVLEAGTEVPEGVACGSEALTVLELAETRNQFLDELMELELFLAQRLAEMEEEADVLAASQFQLAPPALQGQSSPRVASLLASTRALLGQLGTRRMQHLFTILASPRYVDRVSELLQQKLRQAELLLAKREALGQKRQEALAEQGNLEPKLDRLLDTTRELQRLIEADISKRYSGRPVNLMGVCL
SIO_010081: CDK5RAP3
subclass of: SO_0000673
so part of: CDK5RAP3
location: complement(join(553440..553505,553576..553747,553852..554057,554143..554231,554393..554468,554546..554656,554949..555094,555213..555348,555524..555702,555794..555842,555925..556025,556121..556252,556406..556463,556575..556580))
location: region:553440-556580:-1
so has part: feature:556575-556580:-1:exon
so has part: feature:556406-556463:-1:exon
so has part: feature:556121-556252:-1:exon
so has part: feature:555925-556025:-1:exon
so has part: feature:555794-555842:-1:exon
so has part: feature:555524-555702:-1:exon
so has part: feature:555213-555348:-1:exon
so has part: feature:554949-555094:-1:exon
so has part: feature:554546-554656:-1:exon
so has part: feature:554393-554468:-1:exon
so has part: feature:554143-554231:-1:exon
so has part: feature:553852-554057:-1:exon
so has part: feature:553576-553747:-1:exon
so has part: feature:553440-553505:-1:exon

XP_038024763.1
type: Protein
SIO_000068: ncbiprotein

position:553440:-1
position: 553440
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:556580:-1
position: 556580
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:556575-556580:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:556406-556463:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:556121-556252:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:555925-556025:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:555794-555842:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:555524-555702:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:555213-555348:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:554949-555094:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:554546-554656:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:554393-554468:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:554143-554231:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:553852-554057:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:553576-553747:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:553440-553505:-1:exon

PRR15L
type: Gene
subclass of: SO_0000704
RO_0002162: 8839
gene: PRR15L
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 555658..558819
location: region:555658-558819:1
so has part: feature:555658-558819:1:exon
subclass of: SO_0000010

119714090
type: Gene
SIO_000068: ncbigene

position:555658:1
position: 555658
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:558819:1
position: 558819
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:555658-558819:1:exon

PRR15L
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8839
gene: PRR15L
product: proline rich 15 like, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 68 samples with support for all annotated introns
transcript id: XM_038168837.1
SIO_010081: PRR15L
subclass of: SO_0000673
so part of: PRR15L
location: join(555658..555797,557938..558819)
location: region:555658-558819:1
so has part: feature:555658-555797:1:exon
so has part: feature:557938-558819:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:555658-555797:1:exon

position:555797:1
position: 555797
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:557938-558819:1:exon

position:557938:1
position: 557938
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

PRR15L
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8839
gene: PRR15L
product: proline rich 15 like, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 107 samples with support for all annotated introns
transcript id: XM_038168836.1
SIO_010081: PRR15L
subclass of: SO_0000673
so part of: PRR15L
location: join(557089..557463,557938..558819)
location: region:557089-558819:1
so has part: feature:557089-557463:1:exon
so has part: feature:557938-558819:1:exon

position:557089:1
position: 557089
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:557089-557463:1:exon

position:557463:1
position: 557463
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:557938-558819:1:exon

PRR15L
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8839
gene: PRR15L
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: proline-rich protein 15-like protein
translation: MAESHSWWKLTFLRKRKSMPQVLYDSPDVHAGDGPEGNGEGGTPEYTARLEKIVDKSSKGKHVKVSNSGRFKEKKKVRATLADNPGLCTGSEREEK
SIO_010081: PRR15L
subclass of: SO_0000673
so part of: PRR15L
location: 557951..558241
location: region:557951-558241:1
so has part: feature:557951-558241:1:exon

XP_038024764.1
type: Protein
SIO_000068: ncbiprotein

position:557951:1
position: 557951
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:558241:1
position: 558241
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:557951-558241:1:exon

PRR15L
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8839
gene: PRR15L
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: proline-rich protein 15-like protein
translation: MAESHSWWKLTFLRKRKSMPQVLYDSPDVHAGDGPEGNGEGGTPEYTARLEKIVDKSSKGKHVKVSNSGRFKEKKKVRATLADNPGLCTGSEREEK
SIO_010081: PRR15L
subclass of: SO_0000673
so part of: PRR15L
location: 557951..558241
location: region:557951-558241:1
so has part: feature:557951-558241:1:exon

XP_038024765.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:557951-558241:1:exon

LOC119714006
type: Gene
subclass of: SO_0000704
RO_0002162: 8839
gene: LOC119714006
note: Derived by automated computational analysis using gene prediction method: Gnomon.
pseudo: true
so part of: sequence
location: complement(595539..605097)
location: region:595539-605097:-1
so has part: feature:595539-605097:-1:exon

119714006
type: Gene
SIO_000068: ncbigene

position:595539:-1
position: 595539
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:605097:-1
position: 605097
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:595539-605097:-1:exon

LOC119714006
type: Exon
subclass of: SO_0000147
RO_0002162: 8839
gene: LOC119714006
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins, and 90% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC119714006
subclass of: SO_0000673
so part of: LOC119714006
location: complement(595539..596021)
location: region:595539-596021:-1
so has part: feature:595539-596021:-1:exon

position:596021:-1
position: 596021
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:595539-596021:-1:exon

LOC119714006
type: Exon
subclass of: SO_0000147
RO_0002162: 8839
gene: LOC119714006
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins, and 90% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC119714006
subclass of: SO_0000673
so part of: LOC119714006
location: complement(596086..596194)
location: region:596086-596194:-1
so has part: feature:596086-596194:-1:exon

position:596086:-1
position: 596086
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:596194:-1
position: 596194
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:596086-596194:-1:exon

LOC119714006
type: Exon
subclass of: SO_0000147
RO_0002162: 8839
gene: LOC119714006
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins, and 90% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC119714006
subclass of: SO_0000673
so part of: LOC119714006
location: complement(596288..596393)
location: region:596288-596393:-1
so has part: feature:596288-596393:-1:exon

position:596288:-1
position: 596288
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:596393:-1
position: 596393
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:596288-596393:-1:exon

LOC119714006
type: Exon
subclass of: SO_0000147
RO_0002162: 8839
gene: LOC119714006
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins, and 90% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC119714006
subclass of: SO_0000673
so part of: LOC119714006
location: complement(596538..596590)
location: region:596538-596590:-1
so has part: feature:596538-596590:-1:exon

position:596538:-1
position: 596538
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:596590:-1
position: 596590
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:596538-596590:-1:exon

LOC119714006
type: Exon
subclass of: SO_0000147
RO_0002162: 8839
gene: LOC119714006
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins, and 90% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC119714006
subclass of: SO_0000673
so part of: LOC119714006
location: complement(596698..596797)
location: region:596698-596797:-1
so has part: feature:596698-596797:-1:exon

position:596698:-1
position: 596698
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:596797:-1
position: 596797
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:596698-596797:-1:exon

LOC119714006
type: Exon
subclass of: SO_0000147
RO_0002162: 8839
gene: LOC119714006
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins, and 90% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC119714006
subclass of: SO_0000673
so part of: LOC119714006
location: complement(596868..597015)
location: region:596868-597015:-1
so has part: feature:596868-597015:-1:exon

position:596868:-1
position: 596868
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:597015:-1
position: 597015
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:596868-597015:-1:exon

LOC119714006
type: Exon
subclass of: SO_0000147
RO_0002162: 8839
gene: LOC119714006
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins, and 90% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC119714006
subclass of: SO_0000673
so part of: LOC119714006
location: complement(597113..597706)
location: region:597113-597706:-1
so has part: feature:597113-597706:-1:exon

position:597113:-1
position: 597113
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:597706:-1
position: 597706
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:597113-597706:-1:exon

LOC119714006
type: Exon
subclass of: SO_0000147
RO_0002162: 8839
gene: LOC119714006
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins, and 90% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC119714006
subclass of: SO_0000673
so part of: LOC119714006
location: complement(597793..597854)
location: region:597793-597854:-1
so has part: feature:597793-597854:-1:exon

position:597793:-1
position: 597793
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:597854:-1
position: 597854
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:597793-597854:-1:exon

LOC119714006
type: Exon
subclass of: SO_0000147
RO_0002162: 8839
gene: LOC119714006
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins, and 90% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC119714006
subclass of: SO_0000673
so part of: LOC119714006
location: complement(598340..598498)
location: region:598340-598498:-1
so has part: feature:598340-598498:-1:exon

position:598340:-1
position: 598340
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:598498:-1
position: 598498
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:598340-598498:-1:exon

LOC119714006
type: Exon
subclass of: SO_0000147
RO_0002162: 8839
gene: LOC119714006
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins, and 90% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC119714006
subclass of: SO_0000673
so part of: LOC119714006
location: complement(598581..598702)
location: region:598581-598702:-1
so has part: feature:598581-598702:-1:exon

position:598581:-1
position: 598581
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:598702:-1
position: 598702
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:598581-598702:-1:exon

LOC119714006
type: Exon
subclass of: SO_0000147
RO_0002162: 8839
gene: LOC119714006
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins, and 90% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC119714006
subclass of: SO_0000673
so part of: LOC119714006
location: complement(598799..598953)
location: region:598799-598953:-1
so has part: feature:598799-598953:-1:exon

position:598799:-1
position: 598799
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:598953:-1
position: 598953
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:598799-598953:-1:exon

LOC119714006
type: Exon
subclass of: SO_0000147
RO_0002162: 8839
gene: LOC119714006
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins, and 90% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC119714006
subclass of: SO_0000673
so part of: LOC119714006
location: complement(604268..605097)
location: region:604268-605097:-1
so has part: feature:604268-605097:-1:exon

position:604268:-1
position: 604268
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:604268-605097:-1:exon

TBKBP1
type: Gene
subclass of: SO_0000704
RO_0002162: 8839
gene: TBKBP1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(615289..625886)
location: region:615289-625886:-1
so has part: feature:615289-625886:-1:exon
subclass of: SO_0000010

119714111
type: Gene
SIO_000068: ncbigene

position:615289:-1
position: 615289
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:625886:-1
position: 625886
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:615289-625886:-1:exon

TBKBP1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8839
gene: TBKBP1
product: TBK1 binding protein 1, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 18 samples with support for all annotated introns
transcript id: XM_038168876.1
SIO_010081: TBKBP1
subclass of: SO_0000673
so part of: TBKBP1
location: complement(join(615289..616349,616569..617308,617530..617648,621973..622022,622098..622258,622348..622501,622761..622865,622943..623065,623145..623381,624643..624848,625605..625886))
location: region:615289-625886:-1
so has part: feature:625605-625886:-1:exon
so has part: feature:624643-624848:-1:exon
so has part: feature:623145-623381:-1:exon
so has part: feature:622943-623065:-1:exon
so has part: feature:622761-622865:-1:exon
so has part: feature:622348-622501:-1:exon
so has part: feature:622098-622258:-1:exon
so has part: feature:621973-622022:-1:exon
so has part: feature:617530-617648:-1:exon
so has part: feature:616569-617308:-1:exon
so has part: feature:615289-616349:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:625605-625886:-1:exon

position:625605:-1
position: 625605
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:624643-624848:-1:exon

position:624643:-1
position: 624643
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:624848:-1
position: 624848
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:623145-623381:-1:exon

position:623145:-1
position: 623145
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:623381:-1
position: 623381
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:622943-623065:-1:exon

position:622943:-1
position: 622943
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:623065:-1
position: 623065
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:622761-622865:-1:exon

position:622761:-1
position: 622761
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:622865:-1
position: 622865
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:622348-622501:-1:exon

position:622348:-1
position: 622348
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:622501:-1
position: 622501
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:622098-622258:-1:exon

position:622098:-1
position: 622098
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:622258:-1
position: 622258
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:621973-622022:-1:exon

position:621973:-1
position: 621973
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:622022:-1
position: 622022
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:617530-617648:-1:exon

position:617530:-1
position: 617530
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:617648:-1
position: 617648
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:616569-617308:-1:exon

position:616569:-1
position: 616569
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:617308:-1
position: 617308
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:615289-616349:-1:exon

position:616349:-1
position: 616349
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

TBKBP1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8839
gene: TBKBP1
product: TBK1 binding protein 1, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 70 samples with support for all annotated introns
transcript id: XM_038168875.1
SIO_010081: TBKBP1
subclass of: SO_0000673
so part of: TBKBP1
location: complement(join(615289..616349,616569..617308,617530..617648,621973..622022,622098..622258,622348..622501,622761..622865,622943..623065,623145..623381,624643..624856,625605..625885))
location: region:615289-625885:-1
so has part: feature:625605-625885:-1:exon
so has part: feature:624643-624856:-1:exon
so has part: feature:623145-623381:-1:exon
so has part: feature:622943-623065:-1:exon
so has part: feature:622761-622865:-1:exon
so has part: feature:622348-622501:-1:exon
so has part: feature:622098-622258:-1:exon
so has part: feature:621973-622022:-1:exon
so has part: feature:617530-617648:-1:exon
so has part: feature:616569-617308:-1:exon
so has part: feature:615289-616349:-1:exon

position:625885:-1
position: 625885
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:625605-625885:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:624643-624856:-1:exon

position:624856:-1
position: 624856
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:623145-623381:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:622943-623065:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:622761-622865:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:622348-622501:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:622098-622258:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:621973-622022:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:617530-617648:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:616569-617308:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:615289-616349:-1:exon

TBKBP1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8839
gene: TBKBP1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: TANK-binding kinase 1-binding protein 1
translation: MDSMFEDDISILTQEALGPDEDWLDSPNTDLSGEMCSASHFALITAYDDIKNRLTGLERENSTLKRRLKMYEVKYPLIGEFGEEHIFSAYEAKETSLLKSEKASLQQQLNQFQHELQKSKEREEQLDEMIQAYEKLCVEKADLESELGEMRALVETHLSRIRSLEQQLRQRDGGAFPGLSAPLPGQEVPFLSLHPNPALSHVLDRPAGWPSRGLEAELEAARQEAQRAQHREEHLKAECERLQAELKHLQDTRQQEQSERDMAWVKKMGDDQVNLALAYTELTEELCRLRNLSSLQSQILRALLQEKSLNGGQRHSPLSQCHSPAQQRRSPAPQCPSPAPGRPPAPQCQSPALQRRSPAPQCQSPAQQHRSPAPGPCQSPAQQRRSPVPTSSPSPAQQRRSPAPPPCPSPASASPHRLPGERMELGYAKPSSRHIKAGFQGRRSYSEVSNVALYQQSRSLWLQPEASTLPKHRPYGEVYLGGTGAPLSAREPFEEHVRFEKQSSDEEDWAVPSPPSPEVGAVRCASFCAGFPIPDTAAHRAAAAYARTEHAQSWPSINLLMETVDSEIRSCPLCQLAFPIGYPDDALIKHIDSHLENSKI
SIO_010081: TBKBP1
subclass of: SO_0000673
so part of: TBKBP1
location: complement(join(616221..616349,616569..617308,617530..617648,621973..622022,622098..622258,622348..622501,622761..622865,622943..623065,623145..623366))
location: region:616221-623366:-1
so has part: feature:623145-623366:-1:exon
so has part: feature:622943-623065:-1:exon
so has part: feature:622761-622865:-1:exon
so has part: feature:622348-622501:-1:exon
so has part: feature:622098-622258:-1:exon
so has part: feature:621973-622022:-1:exon
so has part: feature:617530-617648:-1:exon
so has part: feature:616569-617308:-1:exon
so has part: feature:616221-616349:-1:exon

XP_038024803.1
type: Protein
SIO_000068: ncbiprotein

position:616221:-1
position: 616221
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:623366:-1
position: 623366
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:623145-623366:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:622943-623065:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:622761-622865:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:622348-622501:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:622098-622258:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:621973-622022:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:617530-617648:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:616569-617308:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:616221-616349:-1:exon

TBKBP1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8839
gene: TBKBP1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: TANK-binding kinase 1-binding protein 1
translation: MDSMFEDDISILTQEALGPDEDWLDSPNTDLSGEMCSASHFALITAYDDIKNRLTGLERENSTLKRRLKMYEVKYPLIGEFGEEHIFSAYEAKETSLLKSEKASLQQQLNQFQHELQKSKEREEQLDEMIQAYEKLCVEKADLESELGEMRALVETHLSRIRSLEQQLRQRDGGAFPGLSAPLPGQEVPFLSLHPNPALSHVLDRPAGWPSRGLEAELEAARQEAQRAQHREEHLKAECERLQAELKHLQDTRQQEQSERDMAWVKKMGDDQVNLALAYTELTEELCRLRNLSSLQSQILRALLQEKSLNGGQRHSPLSQCHSPAQQRRSPAPQCPSPAPGRPPAPQCQSPALQRRSPAPQCQSPAQQHRSPAPGPCQSPAQQRRSPVPTSSPSPAQQRRSPAPPPCPSPASASPHRLPGERMELGYAKPSSRHIKAGFQGRRSYSEVSNVALYQQSRSLWLQPEASTLPKHRPYGEVYLGGTGAPLSAREPFEEHVRFEKQSSDEEDWAVPSPPSPEVGAVRCASFCAGFPIPDTAAHRAAAAYARTEHAQSWPSINLLMETVDSEIRSCPLCQLAFPIGYPDDALIKHIDSHLENSKI
SIO_010081: TBKBP1
subclass of: SO_0000673
so part of: TBKBP1
location: complement(join(616221..616349,616569..617308,617530..617648,621973..622022,622098..622258,622348..622501,622761..622865,622943..623065,623145..623366))
location: region:616221-623366:-1
so has part: feature:623145-623366:-1:exon
so has part: feature:622943-623065:-1:exon
so has part: feature:622761-622865:-1:exon
so has part: feature:622348-622501:-1:exon
so has part: feature:622098-622258:-1:exon
so has part: feature:621973-622022:-1:exon
so has part: feature:617530-617648:-1:exon
so has part: feature:616569-617308:-1:exon
so has part: feature:616221-616349:-1:exon

XP_038024804.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:623145-623366:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:622943-623065:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:622761-622865:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:622348-622501:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:622098-622258:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:621973-622022:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:617530-617648:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:616569-617308:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:616221-616349:-1:exon

KPNB1
type: Gene
subclass of: SO_0000704
RO_0002162: 8839
gene: KPNB1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(630122..652048)
location: region:630122-652048:-1
so has part: feature:630122-652048:-1:exon
subclass of: SO_0000010

119714068
type: Gene
SIO_000068: ncbigene

position:630122:-1
position: 630122
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:652048:-1
position: 652048
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:630122-652048:-1:exon

KPNB1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8839
gene: KPNB1
product: karyopherin subunit beta 1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 11 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 126 samples with support for all annotated introns
transcript id: XM_038168728.1
SIO_010081: KPNB1
subclass of: SO_0000673
so part of: KPNB1
location: complement(join(630122..631428,631980..632141,632752..632866,633200..633305,633414..633557,633815..633922,634539..634621,635699..635843,638073..638144,638418..638565,639751..639881,641110..641301,641523..641747,642865..642966,644186..644296,644497..644586,644958..645017,646101..646253,647916..648116,649682..649864,651541..651599,651891..652048))
location: region:630122-652048:-1
so has part: feature:651891-652048:-1:exon
so has part: feature:651541-651599:-1:exon
so has part: feature:649682-649864:-1:exon
so has part: feature:647916-648116:-1:exon
so has part: feature:646101-646253:-1:exon
so has part: feature:644958-645017:-1:exon
so has part: feature:644497-644586:-1:exon
so has part: feature:644186-644296:-1:exon
so has part: feature:642865-642966:-1:exon
so has part: feature:641523-641747:-1:exon
so has part: feature:641110-641301:-1:exon
so has part: feature:639751-639881:-1:exon
so has part: feature:638418-638565:-1:exon
so has part: feature:638073-638144:-1:exon
so has part: feature:635699-635843:-1:exon
so has part: feature:634539-634621:-1:exon
so has part: feature:633815-633922:-1:exon
so has part: feature:633414-633557:-1:exon
so has part: feature:633200-633305:-1:exon
so has part: feature:632752-632866:-1:exon
so has part: feature:631980-632141:-1:exon
so has part: feature:630122-631428:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:651891-652048:-1:exon

position:651891:-1
position: 651891
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:651541-651599:-1:exon

position:651541:-1
position: 651541
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:651599:-1
position: 651599
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:649682-649864:-1:exon

position:649682:-1
position: 649682
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:649864:-1
position: 649864
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:647916-648116:-1:exon

position:647916:-1
position: 647916
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:648116:-1
position: 648116
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:646101-646253:-1:exon

position:646101:-1
position: 646101
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:646253:-1
position: 646253
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:644958-645017:-1:exon

position:644958:-1
position: 644958
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:645017:-1
position: 645017
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:644497-644586:-1:exon

position:644497:-1
position: 644497
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:644586:-1
position: 644586
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:644186-644296:-1:exon

position:644186:-1
position: 644186
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:644296:-1
position: 644296
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:642865-642966:-1:exon

position:642865:-1
position: 642865
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:642966:-1
position: 642966
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:641523-641747:-1:exon

position:641523:-1
position: 641523
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:641747:-1
position: 641747
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:641110-641301:-1:exon

position:641110:-1
position: 641110
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:641301:-1
position: 641301
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:639751-639881:-1:exon

position:639751:-1
position: 639751
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:639881:-1
position: 639881
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:638418-638565:-1:exon

position:638418:-1
position: 638418
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:638565:-1
position: 638565
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:638073-638144:-1:exon

position:638073:-1
position: 638073
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:638144:-1
position: 638144
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:635699-635843:-1:exon

position:635699:-1
position: 635699
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:635843:-1
position: 635843
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:634539-634621:-1:exon

position:634539:-1
position: 634539
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:634621:-1
position: 634621
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:633815-633922:-1:exon

position:633815:-1
position: 633815
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:633922:-1
position: 633922
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:633414-633557:-1:exon

position:633414:-1
position: 633414
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:633557:-1
position: 633557
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:633200-633305:-1:exon

position:633200:-1
position: 633200
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:633305:-1
position: 633305
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:632752-632866:-1:exon

position:632752:-1
position: 632752
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:632866:-1
position: 632866
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:631980-632141:-1:exon

position:631980:-1
position: 631980
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:632141:-1
position: 632141
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 22
SIO_000628: feature:630122-631428:-1:exon

position:631428:-1
position: 631428
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

KPNB1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8839
gene: KPNB1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: importin subunit beta-1
translation: MELITILEKTVSPDRSELEAAQKFLEQAAIENLPTFLVELSRVLANPGNSQVARVAAGLQIKNSLTSKDPDIKAQYQQRWLAIDANARREVKNYVLQTLGTETYRPSSASQCVAGIACAEIPMSQWPELIPQLVANVTNQHSTEHMKESTLEAIGYICQDIDPEQLQDKSNEILTAIIQGMRKEEPSNNVKLAATNALLNSLEFTKANFDKESERHFIMQVVCEATQCPDTRVRVAALQNLVKIMSLYYQYMETYMGPALFAITIEAMKSDIDEVALQGIEFWSNVCDEEMDLAIEASEAAEQGRPPEHTSKFYAKGALQYLVPILTQTLTKQDENDDDDDWNPCKAAGVCLMLLATCCEDDIVPHVLPFIKEHIKNPDWRYRDAAVMAFGCILEGPEPNQLKPLVIQAMPTLIELMKDPSVVVRDTTAWTVGRICEMLPEAAINDIYLAPLLQCLIEGLSAEPRVASNVCWAFTSLAEAAYEAADVADDQEEPATYCLSSSFELIVQKLLETTDRPDGHQNNLRSSAYEALMEIVKNSAKDCYPAVQKTTLVIMERLQQVLQMESHIQSTSDRIQFNDLQSLLCATLQNVLRKVQHQDALQISDVVMASLLRMFQSTAGSGGVQEDALMAVSTLVEVLGGEFLKYMDAFKPFLGIGLKNYAEYQVCLAAVGLVGDLCRALQSNILPFCDEVMQLLLENLGNENVHRSVKPQILSVFGDIALAIGGEFKKYLDVVLNTLQQASQAQVDKSDYDMVDYLNELREGCLEAYTGIIQGLKGDQENVHPDVMLVQPRVEFILSYIDHIAGDEDHTDGVVACAAGLIGDLCTAFGKDVLKLVEARPMIHELLTEGRRSKTNKTKTLATWATKELRKLKNQA
SIO_010081: KPNB1
subclass of: SO_0000673
so part of: KPNB1
location: complement(join(631428,631980..632141,632752..632866,633200..633305,633414..633557,633815..633922,634539..634621,635699..635843,638073..638144,638418..638565,639751..639881,641110..641301,641523..641747,642865..642966,644186..644296,644497..644586,644958..645017,646101..646253,647916..648116,649682..649864,651541..651599,651891..651930))
location: region:631428-651930:-1
so has part: feature:651891-651930:-1:exon
so has part: feature:651541-651599:-1:exon
so has part: feature:649682-649864:-1:exon
so has part: feature:647916-648116:-1:exon
so has part: feature:646101-646253:-1:exon
so has part: feature:644958-645017:-1:exon
so has part: feature:644497-644586:-1:exon
so has part: feature:644186-644296:-1:exon
so has part: feature:642865-642966:-1:exon
so has part: feature:641523-641747:-1:exon
so has part: feature:641110-641301:-1:exon
so has part: feature:639751-639881:-1:exon
so has part: feature:638418-638565:-1:exon
so has part: feature:638073-638144:-1:exon
so has part: feature:635699-635843:-1:exon
so has part: feature:634539-634621:-1:exon
so has part: feature:633815-633922:-1:exon
so has part: feature:633414-633557:-1:exon
so has part: feature:633200-633305:-1:exon
so has part: feature:632752-632866:-1:exon
so has part: feature:631980-632141:-1:exon
so has part: feature:631428-631428:-1:exon

XP_038024656.1
type: Protein
SIO_000068: ncbiprotein

position:651930:-1
position: 651930
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:651891-651930:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:651541-651599:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:649682-649864:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:647916-648116:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:646101-646253:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:644958-645017:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:644497-644586:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:644186-644296:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:642865-642966:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:641523-641747:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:641110-641301:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:639751-639881:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:638418-638565:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:638073-638144:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:635699-635843:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:634539-634621:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:633815-633922:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:633414-633557:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:633200-633305:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:632752-632866:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:631980-632141:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:631428-631428:-1:exon

NPEPPS
type: Gene
subclass of: SO_0000704
RO_0002162: 8839
gene: NPEPPS
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(655018..689256)
location: region:655018-689256:-1
so has part: feature:655018-689256:-1:exon
subclass of: SO_0000010

119714062
type: Gene
SIO_000068: ncbigene

position:655018:-1
position: 655018
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:689256:-1
position: 689256
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:655018-689256:-1:exon

NPEPPS
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8839
gene: NPEPPS
product: aminopeptidase puromycin sensitive
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 126 samples with support for all annotated introns
transcript id: XM_038168704.1
SIO_010081: NPEPPS
subclass of: SO_0000673
so part of: NPEPPS
location: complement(join(655018..655445,657262..657309,657412..657567,657829..657936,658426..658482,659067..659209,659803..660022,661408..661542,663078..663217,663626..663689,664336..664445,665248..665308,665685..665789,666184..666348,668594..668708,670118..670151,670257..670353,670821..671021,671932..672039,672931..673052,674372..674449,680905..680989,689027..689256))
location: region:655018-689256:-1
so has part: feature:689027-689256:-1:exon
so has part: feature:680905-680989:-1:exon
so has part: feature:674372-674449:-1:exon
so has part: feature:672931-673052:-1:exon
so has part: feature:671932-672039:-1:exon
so has part: feature:670821-671021:-1:exon
so has part: feature:670257-670353:-1:exon
so has part: feature:670118-670151:-1:exon
so has part: feature:668594-668708:-1:exon
so has part: feature:666184-666348:-1:exon
so has part: feature:665685-665789:-1:exon
so has part: feature:665248-665308:-1:exon
so has part: feature:664336-664445:-1:exon
so has part: feature:663626-663689:-1:exon
so has part: feature:663078-663217:-1:exon
so has part: feature:661408-661542:-1:exon
so has part: feature:659803-660022:-1:exon
so has part: feature:659067-659209:-1:exon
so has part: feature:658426-658482:-1:exon
so has part: feature:657829-657936:-1:exon
so has part: feature:657412-657567:-1:exon
so has part: feature:657262-657309:-1:exon
so has part: feature:655018-655445:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:689027-689256:-1:exon

position:689027:-1
position: 689027
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:680905-680989:-1:exon

position:680905:-1
position: 680905
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:680989:-1
position: 680989
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:674372-674449:-1:exon

position:674372:-1
position: 674372
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:674449:-1
position: 674449
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:672931-673052:-1:exon

position:672931:-1
position: 672931
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:673052:-1
position: 673052
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:671932-672039:-1:exon

position:671932:-1
position: 671932
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:672039:-1
position: 672039
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:670821-671021:-1:exon

position:670821:-1
position: 670821
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:671021:-1
position: 671021
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:670257-670353:-1:exon

position:670257:-1
position: 670257
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:670353:-1
position: 670353
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:670118-670151:-1:exon

position:670118:-1
position: 670118
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:670151:-1
position: 670151
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:668594-668708:-1:exon

position:668594:-1
position: 668594
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:668708:-1
position: 668708
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:666184-666348:-1:exon

position:666184:-1
position: 666184
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:666348:-1
position: 666348
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:665685-665789:-1:exon

position:665685:-1
position: 665685
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:665789:-1
position: 665789
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:665248-665308:-1:exon

position:665248:-1
position: 665248
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:665308:-1
position: 665308
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:664336-664445:-1:exon

position:664336:-1
position: 664336
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:664445:-1
position: 664445
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:663626-663689:-1:exon

position:663626:-1
position: 663626
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:663689:-1
position: 663689
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:663078-663217:-1:exon

position:663078:-1
position: 663078
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:663217:-1
position: 663217
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:661408-661542:-1:exon

position:661408:-1
position: 661408
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:661542:-1
position: 661542
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:659803-660022:-1:exon

position:659803:-1
position: 659803
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:660022:-1
position: 660022
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:659067-659209:-1:exon

position:659067:-1
position: 659067
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:659209:-1
position: 659209
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:658426-658482:-1:exon

position:658426:-1
position: 658426
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:658482:-1
position: 658482
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:657829-657936:-1:exon

position:657829:-1
position: 657829
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:657936:-1
position: 657936
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:657412-657567:-1:exon

position:657412:-1
position: 657412
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:657567:-1
position: 657567
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 22
SIO_000628: feature:657262-657309:-1:exon

position:657262:-1
position: 657262
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:657309:-1
position: 657309
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 23
SIO_000628: feature:655018-655445:-1:exon

position:655445:-1
position: 655445
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

NPEPPS
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8839
gene: NPEPPS
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: puromycin-sensitive aminopeptidase
translation: MPEKRPFERLPADVCPLNYGLCLKPDLIDFTFEGKLEAAVQVKHATNQIVMNCADIDIITASYAPEGDEEVHATGFNYQNEDEKVTLSFPSTLQKGTGTLKIDFVGELNDKMKGFYRSKYTTPTGDTRYAAVTQFEATDARRAFPCWDEPAIKATFDISLVVPKDRVALSNMNVIDRKPYPDDENLVEVKFARTPIMSTYLVAFVVGEYDFVETRSLDGVLVRVYTPVGKAEQGKFALEVAAKTLPFYKDYFNVPYPLPKIDLIAIADFAAGAMENWGLVTYRETALLIDPKNSCSSSRQWVALVVGHELAHQWFGNLVTMEWWTHLWLNEGFASWIEYLCVDHCFPEYDIWTQFVSADYTRAQELDALDNSHPIEVSVGHPSEVDEIFDAISYSKGASVIRMLHDYIGDEDFRKGMNLYLTKFLQKNAATEDLWESLEKASGKPIAAVMNTWTKQMGFPLIYVEAEQQEEDKVLKLVQKKFCASGPYTGEDFPMWMVPISICTSDDPTCAKMQILMDKPELTLVLKDVKPDQWVKLNLGTVGFYRTQYSPDMLENLIPAIKDLSLPPVDRLGLQNDLFSLARAGIISTVEVLKVMEAFVNEPNYTVWSDLSCNLEILSTLLSHTDFYEEIQVFVKDVFSPIGERLGWDPKPGEGHLDALLRGLVLGKLGKAGHKATLEEARRRFKDHVEGKQILSADLRSPVYVTILKHGDSTTLDTMLKLHKQADMQEEKNRIERVLGAISQPELIQKVLTFALSEEVRPQDTVSVIGGVAGGSKQGRKAAWKFVRDNWEELYNRYQGGFLISRLIKLTVDGFANDKMAAEVKAFFESHPAPSAERTVQQCCENILLNAAWLKRDAENIHQYFLQRKAPPAMV
SIO_010081: NPEPPS
subclass of: SO_0000673
so part of: NPEPPS
location: complement(join(655293..655445,657262..657309,657412..657567,657829..657936,658426..658482,659067..659209,659803..660022,661408..661542,663078..663217,663626..663689,664336..664445,665248..665308,665685..665789,666184..666348,668594..668708,670118..670151,670257..670353,670821..671021,671932..672039,672931..673052,674372..674449,680905..680989,689027..689149))
location: region:655293-689149:-1
so has part: feature:689027-689149:-1:exon
so has part: feature:680905-680989:-1:exon
so has part: feature:674372-674449:-1:exon
so has part: feature:672931-673052:-1:exon
so has part: feature:671932-672039:-1:exon
so has part: feature:670821-671021:-1:exon
so has part: feature:670257-670353:-1:exon
so has part: feature:670118-670151:-1:exon
so has part: feature:668594-668708:-1:exon
so has part: feature:666184-666348:-1:exon
so has part: feature:665685-665789:-1:exon
so has part: feature:665248-665308:-1:exon
so has part: feature:664336-664445:-1:exon
so has part: feature:663626-663689:-1:exon
so has part: feature:663078-663217:-1:exon
so has part: feature:661408-661542:-1:exon
so has part: feature:659803-660022:-1:exon
so has part: feature:659067-659209:-1:exon
so has part: feature:658426-658482:-1:exon
so has part: feature:657829-657936:-1:exon
so has part: feature:657412-657567:-1:exon
so has part: feature:657262-657309:-1:exon
so has part: feature:655293-655445:-1:exon

XP_038024632.1
type: Protein
SIO_000068: ncbiprotein

position:655293:-1
position: 655293
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:689149:-1
position: 689149
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:689027-689149:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:680905-680989:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:674372-674449:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:672931-673052:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:671932-672039:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:670821-671021:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:670257-670353:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:670118-670151:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:668594-668708:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:666184-666348:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:665685-665789:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:665248-665308:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:664336-664445:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:663626-663689:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:663078-663217:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:661408-661542:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:659803-660022:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:659067-659209:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:658426-658482:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:657829-657936:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:657412-657567:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:657262-657309:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:655293-655445:-1:exon

MRPL45
type: Gene
subclass of: SO_0000704
RO_0002162: 8839
gene: MRPL45
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 693043..696952
location: region:693043-696952:1
so has part: feature:693043-696952:1:exon
subclass of: SO_0000010

119714113
type: Gene
SIO_000068: ncbigene

position:693043:1
position: 693043
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:696952:1
position: 696952
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:693043-696952:1:exon

MRPL45
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8839
gene: MRPL45
product: mitochondrial ribosomal protein L45
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 115 samples with support for all annotated introns
transcript id: XM_038168880.1
SIO_010081: MRPL45
subclass of: SO_0000673
so part of: MRPL45
location: join(693043..693172,693353..693542,693988..694105,694481..694579,695136..695184,695423..695572,695653..695826,696502..696952)
location: region:693043-696952:1
so has part: feature:693043-693172:1:exon
so has part: feature:693353-693542:1:exon
so has part: feature:693988-694105:1:exon
so has part: feature:694481-694579:1:exon
so has part: feature:695136-695184:1:exon
so has part: feature:695423-695572:1:exon
so has part: feature:695653-695826:1:exon
so has part: feature:696502-696952:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:693043-693172:1:exon

position:693172:1
position: 693172
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:693353-693542:1:exon

position:693353:1
position: 693353
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:693542:1
position: 693542
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:693988-694105:1:exon

position:693988:1
position: 693988
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:694105:1
position: 694105
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:694481-694579:1:exon

position:694481:1
position: 694481
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:694579:1
position: 694579
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:695136-695184:1:exon

position:695136:1
position: 695136
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:695184:1
position: 695184
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:695423-695572:1:exon

position:695423:1
position: 695423
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:695572:1
position: 695572
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:695653-695826:1:exon

position:695653:1
position: 695653
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:695826:1
position: 695826
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:696502-696952:1:exon

position:696502:1
position: 696502
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

MRPL45
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8839
gene: MRPL45
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: 39S ribosomal protein L45, mitochondrial
translation: MAAAMRVAGLGLLGRRASALRPPGAAPPCLAVPVRTKRRLFVPDWARELSPAERESRLRAAARALPEDRLERAFFLACTADIIDPYVPPEGDARMSSLSKDGLKQRVEKLKQTAASQLALRKVKDHVPDFSTKTFPEKAQEIFIEAHNCLANFNKQKLHSLVTERCYPDMVRGNRYKTIRWSFVESLEPPRVVHIRCNSMVNPSNLYGQVTVRMHTRQTLAVYDRFGRLMYGGEQVPKDVLEYVVFERYLVNPYGTWRMHGKIVPEWAPPKDPIIKTVMIPGPALDSSQEIKEHKEETSEQVQRQQ
SIO_010081: MRPL45
subclass of: SO_0000673
so part of: MRPL45
location: join(693125..693172,693353..693542,693988..694105,694481..694579,695136..695184,695423..695572,695653..695826,696502..696594)
location: region:693125-696594:1
so has part: feature:693125-693172:1:exon
so has part: feature:693353-693542:1:exon
so has part: feature:693988-694105:1:exon
so has part: feature:694481-694579:1:exon
so has part: feature:695136-695184:1:exon
so has part: feature:695423-695572:1:exon
so has part: feature:695653-695826:1:exon
so has part: feature:696502-696594:1:exon

XP_038024808.1
type: Protein
SIO_000068: ncbiprotein

position:693125:1
position: 693125
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:696594:1
position: 696594
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:693125-693172:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:693353-693542:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:693988-694105:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:694481-694579:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:695136-695184:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:695423-695572:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:695653-695826:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:696502-696594:1:exon

GPR179
type: Gene
subclass of: SO_0000704
RO_0002162: 8839
gene: GPR179
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(697975..708815)
location: region:697975-708815:-1
so has part: feature:697975-708815:-1:exon
subclass of: SO_0000010

119714119
type: Gene
SIO_000068: ncbigene

position:697975:-1
position: 697975
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:708815:-1
position: 708815
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:697975-708815:-1:exon

GPR179
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8839
gene: GPR179
product: G protein-coupled receptor 179
exception: unclassified transcription discrepancy
note: The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: deleted 4 bases in 4 codons; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 98% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_038168885.1
SIO_010081: GPR179
subclass of: SO_0000673
so part of: GPR179
location: complement(join(697975..703024,703391..703537,703659..703764,703909..704047,704480..704718,704794..704903,705420..705486,705654..705891,706021..706125,707180..707288,707832..708815))
location: region:697975-708815:-1
so has part: feature:707832-708815:-1:exon
so has part: feature:707180-707288:-1:exon
so has part: feature:706021-706125:-1:exon
so has part: feature:705654-705891:-1:exon
so has part: feature:705420-705486:-1:exon
so has part: feature:704794-704903:-1:exon
so has part: feature:704480-704718:-1:exon
so has part: feature:703909-704047:-1:exon
so has part: feature:703659-703764:-1:exon
so has part: feature:703391-703537:-1:exon
so has part: feature:697975-703024:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:707832-708815:-1:exon

position:707832:-1
position: 707832
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:707180-707288:-1:exon

position:707180:-1
position: 707180
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:707288:-1
position: 707288
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:706021-706125:-1:exon

position:706021:-1
position: 706021
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:706125:-1
position: 706125
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:705654-705891:-1:exon

position:705654:-1
position: 705654
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:705891:-1
position: 705891
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:705420-705486:-1:exon

position:705420:-1
position: 705420
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:705486:-1
position: 705486
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:704794-704903:-1:exon

position:704794:-1
position: 704794
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:704903:-1
position: 704903
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:704480-704718:-1:exon

position:704480:-1
position: 704480
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:704718:-1
position: 704718
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:703909-704047:-1:exon

position:703909:-1
position: 703909
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:704047:-1
position: 704047
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:703659-703764:-1:exon

position:703659:-1
position: 703659
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:703764:-1
position: 703764
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:703391-703537:-1:exon

position:703391:-1
position: 703391
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:703537:-1
position: 703537
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:697975-703024:-1:exon

position:703024:-1
position: 703024
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

GPR179
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8839
gene: GPR179
exception: unclassified translation discrepancy
note: The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: deleted 4 bases in 4 codons; Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: LOW QUALITY PROTEIN: probable G-protein coupled receptor 179
translation: MGPWWWPLLWWLHAVLLLGGAQRPPASPPPWVPTSEPGPSGDAEGSAAALAFLRSGDAQRLARANCSRGVAAGAPGSGPPPALRAALRAAPEALAQAANFLNMLFQSNDIREASVAEDVEWYQALVRSLAEGHPWVRRAVLALDAHPLAAKPRLMLQATAGEGEIRLRDVSAAAPSLGNRSWDNEWFNALRAQRSPQLRKRVLSNDLRSMETPKWQRGDSYVGEPGHVRWSPPFLECQDGKFLPTWAVTLSSAFYGLKPDLSPEFKGVVRVDIELRDVGIDQCASGPGWFAGTHRCDLNSTQCIPQESRGFVLGQYECRCKPGFYGAGGVAIRHPGQAWRGAWCRLDGGPQAGCRPCREGCASCVDDTPCLIQEDRALRAAILSCQASCMLAVFLSMLVSYHFRRKQGKSRRGCTRIRASGVVLLETILFGSLLLYFPVFILYFKPSIFRCIVLRWVRMLGFATVYGTIALKLYRVLRVFLARTAQRVPYMSSGRVLKMLGLILLLVLWFLAAWTVGMLENVDKNIPLVVRTQTARGLHFYICGHDRWDYMMVVAEMLFLLWGSSLCYATRAVPSAFHEPRYMGIALHNELMISAAFHVARFVVVPSLHPDWTLLLFFAHTHSTVTMTLALIFIPKFLHAGSPLREEIAAEVYEDELDMRRSGSCLNSSIASAWSERSLDPDDIREELKKLYAQLEVLKTRRMAANNPHLPKKRGSRRSLGRSLVRRLAELPEAVAPRGSREERLRTPGSCRASAKRLPSTGSASLRARDGGSRHHAAALRKSRSSETPAWDPRGGSPDPSPSGDTVPGTPVVTTAGSGQSDSESLDAAPLVCKSASAHDLSGHQQPPQPRAALLLKSLSVVAGARDEALLVASRAARGGRDAERGAEHRATQRPATGHPMEQAPPEQAAAAARDGCAPLPAGSGRADGGPSRDASPPGDGKAQKHVTYAPTKSSSVDGSHLSGRVRVAVRKTPPPPPVRYQSLVHHAGDSRETAEPPEPPEGTPGRAHPPAGQGRLQSARSIPAEVCPWELIQEEILSRKQKAAEPSASGTSGDTPVAPPSLKPPSQKTFKSLGLAIKALNRSRGKNSLKGKKESEGSLRKKGRDGDGGSRRERPKLAGTPTFSPGGSSQGPTNGSPKPSPQEGDAVPWQHNNNAGSTSESAAWGGSGGQAEGQEDGTAADGGDGGEEPGAAPGSTDTGRVPETPLGTHEVSPSSSRGDTSEHPQQTPAPPPAPPAPPAPPPPLELGTGGPRVPGHSAAAAGPRAEVCPWEALGAPPGALALQEATAAGGGSPKKVLGKGGSQPGPRNAREGRGTEGLPARSRSTEVARAGGGLRTEICPWEGSGGEAGPPHGGPGSVGPGAELGEKPPELPAAAPGTAGSGGGRTAEVCPWESAEGGPAPRAEICPWEVGEPQPEKGKVQQDGGRLPRGGSSIRPRSLGLLRAQDGGGRQPAASRPWGSASTELPPPRAAPHSSDLPKVTSESPESARASVCPSSTQAGNVGSLKADVCPWEAEEEPLAKAEICPWEVSAAPQGKGRGSQDPRGAPPAATKPKSGEPEGSKAKLAGEGGRAARRDTQISAELFGKSLEGPRAEAKQSQSTESPKAEICPWGVAAAPLGEQPRAEQALRAGPRGEKRIRRQAALGSPARSLQGGGSDAVSPWDPPKPRVGVPALPAAREAQSTESPKAEVCPWEAQGLGAGGKAEICPWEVAAVPSDKGKLRQDGGGRPGGSRNTSTERGGLKETGDSPKSWDREAVCPWESMGGTKSPELPKAAPTKPGSTGSSVAEVCPWDSPGLGSPALPQGRALSTEICPWEAQGLGAGDKAEICPWEVAAALPGKGASSERTGAAPGEARPRPQHRGASKAVEKGSSEREAVCPWESLGTGEPPQKAGTGREASKKWDSSESRRADICPWEAAEPEALQIPTPKLGADGAAPAGNGDPKPVATSPPTLPKAGGCSGGQAEHKPLRRVLPGSQPLRAAAGLPRQAHVASSSPSPG…
SIO_010081: GPR179
subclass of: SO_0000673
so part of: GPR179
location: complement(join(698887..703024,703391..703537,703659..703764,703909..704047,704480..704718,704794..704903,705420..705486,705654..705891,706021..706125,707180..707288,707832..708629))
location: region:698887-708629:-1
so has part: feature:707832-708629:-1:exon
so has part: feature:707180-707288:-1:exon
so has part: feature:706021-706125:-1:exon
so has part: feature:705654-705891:-1:exon
so has part: feature:705420-705486:-1:exon
so has part: feature:704794-704903:-1:exon
so has part: feature:704480-704718:-1:exon
so has part: feature:703909-704047:-1:exon
so has part: feature:703659-703764:-1:exon
so has part: feature:703391-703537:-1:exon
so has part: feature:698887-703024:-1:exon

XP_038024813.1
type: Protein
SIO_000068: ncbiprotein

position:698887:-1
position: 698887
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:708629:-1
position: 708629
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:707832-708629:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:707180-707288:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:706021-706125:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:705654-705891:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:705420-705486:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:704794-704903:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:704480-704718:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:703909-704047:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:703659-703764:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:703391-703537:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:698887-703024:-1:exon

SOCS7
type: Gene
subclass of: SO_0000704
RO_0002162: 8839
gene: SOCS7
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 709980..727478
location: region:709980-727478:1
so has part: feature:709980-727478:1:exon
subclass of: SO_0000010

119714076
type: Gene
SIO_000068: ncbigene

position:709980:1
position: 709980
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:727478:1
position: 727478
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:709980-727478:1:exon

SOCS7
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8839
gene: SOCS7
product: suppressor of cytokine signaling 7, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 115 samples with support for all annotated introns
transcript id: XM_038168781.1
SIO_010081: SOCS7
subclass of: SO_0000673
so part of: SOCS7
location: join(709980..711020,714304..714368,716705..716809,717524..717625,718425..718555,718965..719133,720944..721072,723440..723575,723840..723997,724270..727478)
location: region:709980-727478:1
so has part: feature:709980-711020:1:exon
so has part: feature:714304-714368:1:exon
so has part: feature:716705-716809:1:exon
so has part: feature:717524-717625:1:exon
so has part: feature:718425-718555:1:exon
so has part: feature:718965-719133:1:exon
so has part: feature:720944-721072:1:exon
so has part: feature:723440-723575:1:exon
so has part: feature:723840-723997:1:exon
so has part: feature:724270-727478:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:709980-711020:1:exon

position:711020:1
position: 711020
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:714304-714368:1:exon

position:714304:1
position: 714304
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:714368:1
position: 714368
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:716705-716809:1:exon

position:716705:1
position: 716705
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:716809:1
position: 716809
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:717524-717625:1:exon

position:717524:1
position: 717524
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:717625:1
position: 717625
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:718425-718555:1:exon

position:718425:1
position: 718425
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:718555:1
position: 718555
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:718965-719133:1:exon

position:718965:1
position: 718965
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:719133:1
position: 719133
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:720944-721072:1:exon

position:720944:1
position: 720944
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:721072:1
position: 721072
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:723440-723575:1:exon

position:723440:1
position: 723440
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:723575:1
position: 723575
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:723840-723997:1:exon

position:723840:1
position: 723840
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:723997:1
position: 723997
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:724270-727478:1:exon

position:724270:1
position: 724270
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

SOCS7
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8839
gene: SOCS7
product: suppressor of cytokine signaling 7, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 125 samples with support for all annotated introns
transcript id: XM_038168782.1
SIO_010081: SOCS7
subclass of: SO_0000673
so part of: SOCS7
location: join(709982..711020,714304..714368,716705..716809,718425..718555,718965..719133,720944..721072,723440..723575,723840..723997,724270..727478)
location: region:709982-727478:1
so has part: feature:709982-711020:1:exon
so has part: feature:714304-714368:1:exon
so has part: feature:716705-716809:1:exon
so has part: feature:718425-718555:1:exon
so has part: feature:718965-719133:1:exon
so has part: feature:720944-721072:1:exon
so has part: feature:723440-723575:1:exon
so has part: feature:723840-723997:1:exon
so has part: feature:724270-727478:1:exon

position:709982:1
position: 709982
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:709982-711020:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:714304-714368:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:716705-716809:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:718425-718555:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:718965-719133:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:720944-721072:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:723440-723575:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:723840-723997:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:724270-727478:1:exon

SOCS7
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8839
gene: SOCS7
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: suppressor of cytokine signaling 7 isoform X1
translation: MQRAELRDGEAAAAAAASYRVLSRLLGYGAAPEAGAVAAGGGGAVTGGAGAGPTGPGGGRLPLPLPLPAAAAALPGGGALRGPRPPPQLMVFRNAAEGRPGEPEDGGPAAGGGGGEGPAAAGTELLCPRHRCALEPKAAAAAAAAGRWGPPGGLELQLAALGLRPPGLGPKGPGGCPCLGPPPPAGPAAEETSDALLVLEALEPDEAGSGSEEEAGSPDGQEPPRGAARANGRSGTGPGASLGPGAGAGPGPVLPPPGAGCRKGSLRVRLRRLFRTKSCSGGSAAGDAAAATGSRRAGDLPASAGSLTDVCGARGREQEAGRKHRLTRTQSAFSPVVFSPLFTGETVSLVDVDISQRGLTSPHPPTPPPPPRRSLSLLDDISGTLPTSVLVGPMGSSLQSFPLPPPPPPHAPDAFPRIVPLRPMETAPSQPAPHLQCPLYRPDSSSFAASLRELEKCGWYWGPMNWEDAEMKLKGKPDGSFLVRDSSDPRYILSLSFRSQGITHHTRMEHYRGTFSLWCHPKFEDRCQSVVEFIKRAIMHSKNGKFLYFLRSRVPGLPPTPVQLLYPVSRFSNVKSLQHLCRFRIRQLVRIDHIPELPLPKPLISYIRKFYYYDPQEEVYLSLKEAQLISKQKQEAESST
SIO_010081: SOCS7
subclass of: SO_0000673
so part of: SOCS7
location: join(710056..711020,714304..714368,716705..716809,717524..717625,718425..718555,718965..719133,720944..721072,723440..723575,723840..723960)
location: region:710056-723960:1
so has part: feature:710056-711020:1:exon
so has part: feature:714304-714368:1:exon
so has part: feature:716705-716809:1:exon
so has part: feature:717524-717625:1:exon
so has part: feature:718425-718555:1:exon
so has part: feature:718965-719133:1:exon
so has part: feature:720944-721072:1:exon
so has part: feature:723440-723575:1:exon
so has part: feature:723840-723960:1:exon

XP_038024709.1
type: Protein
SIO_000068: ncbiprotein

position:710056:1
position: 710056
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:723960:1
position: 723960
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:710056-711020:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:714304-714368:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:716705-716809:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:717524-717625:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:718425-718555:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:718965-719133:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:720944-721072:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:723440-723575:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:723840-723960:1:exon

SOCS7
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8839
gene: SOCS7
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: suppressor of cytokine signaling 7 isoform X2
translation: MQRAELRDGEAAAAAAASYRVLSRLLGYGAAPEAGAVAAGGGGAVTGGAGAGPTGPGGGRLPLPLPLPAAAAALPGGGALRGPRPPPQLMVFRNAAEGRPGEPEDGGPAAGGGGGEGPAAAGTELLCPRHRCALEPKAAAAAAAAGRWGPPGGLELQLAALGLRPPGLGPKGPGGCPCLGPPPPAGPAAEETSDALLVLEALEPDEAGSGSEEEAGSPDGQEPPRGAARANGRSGTGPGASLGPGAGAGPGPVLPPPGAGCRKGSLRVRLRRLFRTKSCSGGSAAGDAAAATGSRRAGDLPASAGSLTDVCGARGREQEAGRKHRLTRTQSAFSPVVFSPLFTGETVSLVDVDISQRGLTSPHPPTPPPPPRRSLSLLDAFPRIVPLRPMETAPSQPAPHLQCPLYRPDSSSFAASLRELEKCGWYWGPMNWEDAEMKLKGKPDGSFLVRDSSDPRYILSLSFRSQGITHHTRMEHYRGTFSLWCHPKFEDRCQSVVEFIKRAIMHSKNGKFLYFLRSRVPGLPPTPVQLLYPVSRFSNVKSLQHLCRFRIRQLVRIDHIPELPLPKPLISYIRKFYYYDPQEEVYLSLKEAQLISKQKQEAESST
SIO_010081: SOCS7
subclass of: SO_0000673
so part of: SOCS7
location: join(710056..711020,714304..714368,716705..716809,718425..718555,718965..719133,720944..721072,723440..723575,723840..723960)
location: region:710056-723960:1
so has part: feature:710056-711020:1:exon
so has part: feature:714304-714368:1:exon
so has part: feature:716705-716809:1:exon
so has part: feature:718425-718555:1:exon
so has part: feature:718965-719133:1:exon
so has part: feature:720944-721072:1:exon
so has part: feature:723440-723575:1:exon
so has part: feature:723840-723960:1:exon

XP_038024710.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:710056-711020:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:714304-714368:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:716705-716809:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:718425-718555:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:718965-719133:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:720944-721072:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:723440-723575:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:723840-723960:1:exon

ARHGAP23
type: Gene
subclass of: SO_0000704
RO_0002162: 8839
gene: ARHGAP23
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 743630..762067
location: region:743630-762067:1
so has part: feature:743630-762067:1:exon
subclass of: SO_0000010

101795727
type: Gene
SIO_000068: ncbigene

position:743630:1
position: 743630
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:762067:1
position: 762067
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:743630-762067:1:exon

ARHGAP23
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8839
gene: ARHGAP23
product: Rho GTPase activating protein 23
exception: unclassified transcription discrepancy
note: The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: deleted 2 bases in 2 codons; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 98% coverage of the annotated genomic feature by RNAseq alignments, including 62 samples with support for all annotated introns
transcript id: XM_027445416.2
SIO_010081: ARHGAP23
subclass of: SO_0000673
so part of: ARHGAP23
location: join(743630..744220,747123..747302,748769..748793,749671..749763,750114..750192,750421..750475,751558..752998,753284..753439,753603..753714,753806..753863,753981..754118,754202..754501,755787..755848,756230..756357,756520..756638,756723..756878,757244..757322,757521..757594,757676..757765,757872..757997,758112..758153,758260..758354,759723..759754,759864..762067)
location: region:743630-762067:1
so has part: feature:743630-744220:1:exon
so has part: feature:747123-747302:1:exon
so has part: feature:748769-748793:1:exon
so has part: feature:749671-749763:1:exon
so has part: feature:750114-750192:1:exon
so has part: feature:750421-750475:1:exon
so has part: feature:751558-752998:1:exon
so has part: feature:753284-753439:1:exon
so has part: feature:753603-753714:1:exon
so has part: feature:753806-753863:1:exon
so has part: feature:753981-754118:1:exon
so has part: feature:754202-754501:1:exon
so has part: feature:755787-755848:1:exon
so has part: feature:756230-756357:1:exon
so has part: feature:756520-756638:1:exon
so has part: feature:756723-756878:1:exon
so has part: feature:757244-757322:1:exon
so has part: feature:757521-757594:1:exon
so has part: feature:757676-757765:1:exon
so has part: feature:757872-757997:1:exon
so has part: feature:758112-758153:1:exon
so has part: feature:758260-758354:1:exon
so has part: feature:759723-759754:1:exon
so has part: feature:759864-762067:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:743630-744220:1:exon

position:744220:1
position: 744220
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:747123-747302:1:exon

position:747123:1
position: 747123
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:747302:1
position: 747302
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:748769-748793:1:exon

position:748769:1
position: 748769
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:748793:1
position: 748793
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:749671-749763:1:exon

position:749671:1
position: 749671
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:749763:1
position: 749763
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:750114-750192:1:exon

position:750114:1
position: 750114
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:750192:1
position: 750192
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:750421-750475:1:exon

position:750421:1
position: 750421
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:750475:1
position: 750475
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:751558-752998:1:exon

position:751558:1
position: 751558
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:752998:1
position: 752998
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:753284-753439:1:exon

position:753284:1
position: 753284
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:753439:1
position: 753439
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:753603-753714:1:exon

position:753603:1
position: 753603
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:753714:1
position: 753714
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:753806-753863:1:exon

position:753806:1
position: 753806
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:753863:1
position: 753863
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:753981-754118:1:exon

position:753981:1
position: 753981
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:754118:1
position: 754118
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:754202-754501:1:exon

position:754202:1
position: 754202
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:754501:1
position: 754501
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:755787-755848:1:exon

position:755787:1
position: 755787
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:755848:1
position: 755848
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:756230-756357:1:exon

position:756230:1
position: 756230
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:756357:1
position: 756357
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:756520-756638:1:exon

position:756520:1
position: 756520
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:756638:1
position: 756638
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:756723-756878:1:exon

position:756723:1
position: 756723
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:756878:1
position: 756878
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:757244-757322:1:exon

position:757244:1
position: 757244
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:757322:1
position: 757322
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:757521-757594:1:exon

position:757521:1
position: 757521
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:757594:1
position: 757594
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:757676-757765:1:exon

position:757676:1
position: 757676
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:757765:1
position: 757765
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:757872-757997:1:exon

position:757872:1
position: 757872
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:757997:1
position: 757997
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:758112-758153:1:exon

position:758112:1
position: 758112
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:758153:1
position: 758153
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 22
SIO_000628: feature:758260-758354:1:exon

position:758260:1
position: 758260
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:758354:1
position: 758354
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 23
SIO_000628: feature:759723-759754:1:exon

position:759723:1
position: 759723
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:759754:1
position: 759754
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 24
SIO_000628: feature:759864-762067:1:exon

position:759864:1
position: 759864
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

ARHGAP23
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8839
gene: ARHGAP23
exception: unclassified translation discrepancy
note: The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: deleted 2 bases in 2 codons; Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: LOW QUALITY PROTEIN: rho GTPase-activating protein 23
translation: MVEESSGRGERGSRRALRGPPPAPSPVAVVSKALWSVERAGKGWRCERAVGVDCSLPEPRCIWLSSLRRHAASPEPRWPPGPRPRCAPPRTAKGRRPTPGRRDGASPNDNAPPEGPFPWGGPKTVVLRKSTQGGFGFTLRHFIVYPPESAVHSPAKEEENGNRAGPPRSRLEPMDTIFVKNVREDGPAHQAGLRTGDRLVKVNGESIIGKTYSQVIALIQNSDDVLELSIMPKDEDILQLAYSQDAYLKGNEPYSGGAQSIPEPPPLCYPRKTYPFQARGTEPPPGQPPDPRAHRPAGPSAPLGSTRSEGGGSPAHRPEDLQPGGPPQHPAVPHGRPGSFSRSACPGSSASSLPERYGVPPAAPSCYGGGPKHLAEHRTHCGFKESGGGPRVPGRQECQQALSRWFCSQEPRRSTSEERRYAMPPRYRSVSQDRLGGSATPRGWPHSASHDTLLQPTREGWPHRARSDHSLGRCGRSMEALEPGALLSPRLDRSAWPPDRLCRATATGPPGTHSSFAPPSSSSSSSATAAAAPREPAAPVQKHPSQPNLQSVDDSGYIGYRSYSPSFQRRTGLLHARSFRDPAFGGLPTFSITQRPAATAAPFPERVTPVAPLPAGPTHPGPPLALEAPQEQRMESSRVPEQHEERREEVVLRQKPPTGRKMPPPLRQMNFVFPDGVKETDICDPPAAGSRGERPAAERSGRRVAPLAAPEDSLASIPFIDEPTSPSIDLKAKHVPASSVVSSAMNSAPAVATSPSSPTFAFALSRHYSQDCSSIKAGRRSSYLLAITTERSKSCDDGLNTFRDEGKILRRMPSRVPSLRMLRSFFTDGSLDSLGTSEDTRSKRHSTSDLSDVTFSDVRKEGWLHYKQILTKKGKKVGGGIRQWKRVFAVLRTHSLYLCKDRREAVTCGPAPGEEEQPISIRACLVDISYSETKRKHVFRLTTADFCEYLFQAEDREDMLAWIKVIRENSKAEGEDPGFASQALINKKLNDYRKVSPAGAKPDSSPKGSRGLGIRAEFLKQTGTSAPRSPRQDAAVMKDESSSQKAPWGINLMKKNKKSAPRAFGVRLEDCQPAPDNKNVPLIVEACCKVVEDRGLEYMGIYRVPGNNAVVSSLQEQLNKGATEINLQDERWQDLNVISSLLKSFFRKLPEPLFTDDKYNDFIEANRIEDASERMRTLRKLIRDLPGHYYETLKFLVGHLKTIADHSEKNKMEPRNLALVFGPTLVRTSEDNMTDMVTHMPDRYKIVETLIQHSDWFFSDKEDKGEKTPVDEKEAQSVPNIEYLLPNIGRTAAPGDAPDSTHSGSAKVKGTWPSRKEPSPRELLAIPFISAVNRKRKKRREAEGFGSSTDDDVEHRDPKGREQEDEEAAAAAPGPGKAPHGPGTEPAAPSPDQESALEPGGTGAEPAPDARSIVSGYSTLSTIDRSLCSEVQSVAESRGEEADDERSEFSHVETDTESREGAQARLGQVEGGAGGEDKVPPGRPSFNSHRLIQCDTLARRKLGRPRPAGETPAPTGEGHGGWAPPGRPSLREQLRQRLRSSADDMGVRLRRAHSPETRRKKSSWRRHTVVVPGGLKDLNFNEWKEPRGGLDVPPGPCRDKDSGLSSLESTKARPAAPSPAQPGGATKAPSTKSPPGSPGPPAPSPVPPLRFPQCL
SIO_010081: ARHGAP23
subclass of: SO_0000673
so part of: ARHGAP23
location: join(743933..744220,747123..747302,748769..748793,749671..749763,750114..750192,750421..750475,751558..752998,753284..753439,753603..753714,753806..753863,753981..754118,754202..754501,755787..755848,756230..756357,756520..756638,756723..756878,757244..757322,757521..757594,757676..757765,757872..757997,758112..758153,758260..758354,759723..759754,759864..760905)
location: region:743933-760905:1
so has part: feature:743933-744220:1:exon
so has part: feature:747123-747302:1:exon
so has part: feature:748769-748793:1:exon
so has part: feature:749671-749763:1:exon
so has part: feature:750114-750192:1:exon
so has part: feature:750421-750475:1:exon
so has part: feature:751558-752998:1:exon
so has part: feature:753284-753439:1:exon
so has part: feature:753603-753714:1:exon
so has part: feature:753806-753863:1:exon
so has part: feature:753981-754118:1:exon
so has part: feature:754202-754501:1:exon
so has part: feature:755787-755848:1:exon
so has part: feature:756230-756357:1:exon
so has part: feature:756520-756638:1:exon
so has part: feature:756723-756878:1:exon
so has part: feature:757244-757322:1:exon
so has part: feature:757521-757594:1:exon
so has part: feature:757676-757765:1:exon
so has part: feature:757872-757997:1:exon
so has part: feature:758112-758153:1:exon
so has part: feature:758260-758354:1:exon
so has part: feature:759723-759754:1:exon
so has part: feature:759864-760905:1:exon

XP_027301217.2
type: Protein
SIO_000068: ncbiprotein

position:743933:1
position: 743933
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:760905:1
position: 760905
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:743933-744220:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:747123-747302:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:748769-748793:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:749671-749763:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:750114-750192:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:750421-750475:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:751558-752998:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:753284-753439:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:753603-753714:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:753806-753863:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:753981-754118:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:754202-754501:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:755787-755848:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:756230-756357:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:756520-756638:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:756723-756878:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:757244-757322:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:757521-757594:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:757676-757765:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:757872-757997:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:758112-758153:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:758260-758354:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:759723-759754:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:759864-760905:1:exon

SRCIN1
type: Gene
subclass of: SO_0000704
RO_0002162: 8839
gene: SRCIN1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(762251..829222)
location: region:762251-829222:-1
so has part: feature:762251-829222:-1:exon
subclass of: SO_0000010

101795542
type: Gene
SIO_000068: ncbigene

position:762251:-1
position: 762251
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:829222:-1
position: 829222
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:762251-829222:-1:exon

SRCIN1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8839
gene: SRCIN1
product: SRC kinase signaling inhibitor 1, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
transcript id: XM_038168612.1
SIO_010081: SRCIN1
subclass of: SO_0000673
so part of: SRCIN1
location: complement(join(762251..765754,768173..768310,770498..771754,772928..773044,773393..773545,773624..773778,773916..774165,774482..774794,775679..775826,776706..776836,777078..777253,777408..777586,777914..777957,778069..778161,778525..779354,779757..779850,780378..780576,780693..780885,790946..790969,801376..801659,829050..829222))
location: region:762251-829222:-1
so has part: feature:829050-829222:-1:exon
so has part: feature:801376-801659:-1:exon
so has part: feature:790946-790969:-1:exon
so has part: feature:780693-780885:-1:exon
so has part: feature:780378-780576:-1:exon
so has part: feature:779757-779850:-1:exon
so has part: feature:778525-779354:-1:exon
so has part: feature:778069-778161:-1:exon
so has part: feature:777914-777957:-1:exon
so has part: feature:777408-777586:-1:exon
so has part: feature:777078-777253:-1:exon
so has part: feature:776706-776836:-1:exon
so has part: feature:775679-775826:-1:exon
so has part: feature:774482-774794:-1:exon
so has part: feature:773916-774165:-1:exon
so has part: feature:773624-773778:-1:exon
so has part: feature:773393-773545:-1:exon
so has part: feature:772928-773044:-1:exon
so has part: feature:770498-771754:-1:exon
so has part: feature:768173-768310:-1:exon
so has part: feature:762251-765754:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:829050-829222:-1:exon

position:829050:-1
position: 829050
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:801376-801659:-1:exon

position:801376:-1
position: 801376
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:801659:-1
position: 801659
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:790946-790969:-1:exon

position:790946:-1
position: 790946
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:790969:-1
position: 790969
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:780693-780885:-1:exon

position:780693:-1
position: 780693
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:780885:-1
position: 780885
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:780378-780576:-1:exon

position:780378:-1
position: 780378
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:780576:-1
position: 780576
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:779757-779850:-1:exon

position:779757:-1
position: 779757
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:779850:-1
position: 779850
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:778525-779354:-1:exon

position:778525:-1
position: 778525
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:779354:-1
position: 779354
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:778069-778161:-1:exon

position:778069:-1
position: 778069
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:778161:-1
position: 778161
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:777914-777957:-1:exon

position:777914:-1
position: 777914
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:777957:-1
position: 777957
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:777408-777586:-1:exon

position:777408:-1
position: 777408
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:777586:-1
position: 777586
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:777078-777253:-1:exon

position:777078:-1
position: 777078
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:777253:-1
position: 777253
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:776706-776836:-1:exon

position:776706:-1
position: 776706
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:776836:-1
position: 776836
reference: sequence
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SRCIN1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8839
gene: SRCIN1
product: SRC kinase signaling inhibitor 1, transcript variant X6
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XM_038168616.1
SIO_010081: SRCIN1
subclass of: SO_0000673
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location: region:762251-829222:-1
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SRCIN1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8839
gene: SRCIN1
product: SRC kinase signaling inhibitor 1, transcript variant X7
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XM_038168617.1
SIO_010081: SRCIN1
subclass of: SO_0000673
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location: region:762251-829222:-1
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SRCIN1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8839
gene: SRCIN1
product: SRC kinase signaling inhibitor 1, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_038168613.1
SIO_010081: SRCIN1
subclass of: SO_0000673
so part of: SRCIN1
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location: region:762251-811665:-1
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SRCIN1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8839
gene: SRCIN1
product: SRC kinase signaling inhibitor 1, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_038168611.1
SIO_010081: SRCIN1
subclass of: SO_0000673
so part of: SRCIN1
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location: region:762251-811665:-1
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SRCIN1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8839
gene: SRCIN1
product: SRC kinase signaling inhibitor 1, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_038168614.1
SIO_010081: SRCIN1
subclass of: SO_0000673
so part of: SRCIN1
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location: region:762251-811664:-1
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position:811664:-1
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urn:…
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SRCIN1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8839
gene: SRCIN1
product: SRC kinase signaling inhibitor 1, transcript variant X5
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_038168615.1
SIO_010081: SRCIN1
subclass of: SO_0000673
so part of: SRCIN1
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location: region:762251-811664:-1
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position:765993:-1
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SRCIN1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8839
gene: SRCIN1
product: SRC kinase signaling inhibitor 1, transcript variant X11
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 6 samples with support for all annotated introns
transcript id: XM_038168621.1
SIO_010081: SRCIN1
subclass of: SO_0000673
so part of: SRCIN1
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location: region:762251-811652:-1
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SRCIN1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8839
gene: SRCIN1
product: SRC kinase signaling inhibitor 1, transcript variant X10
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 6 samples with support for all annotated introns
transcript id: XM_038168620.1
SIO_010081: SRCIN1
subclass of: SO_0000673
so part of: SRCIN1
location: complement(join(762251..765754,768173..768310,772928..773044,773393..773545,773624..773778,773916..774165,774482..774794,775679..775826,776706..776836,777078..777253,777408..777586,777914..777957,778069..778161,778525..779354,779757..779850,780378..780576,780693..780885,790946..790969,801376..801659,810804..810979,811200..811651))
location: region:762251-811651:-1
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SRCIN1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8839
gene: SRCIN1
product: SRC kinase signaling inhibitor 1, transcript variant X8
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 6 samples with support for all annotated introns
transcript id: XM_038168618.1
SIO_010081: SRCIN1
subclass of: SO_0000673
so part of: SRCIN1
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SRCIN1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8839
gene: SRCIN1
product: SRC kinase signaling inhibitor 1, transcript variant X9
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 6 samples with support for all annotated introns
transcript id: XM_038168619.1
SIO_010081: SRCIN1
subclass of: SO_0000673
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SRCIN1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8839
gene: SRCIN1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: SRC kinase signaling inhibitor 1 isoform X2
translation: MCFSHLFLCTSPSCALPRAHTRARPRSLALCRGLAGGGTGAGRTGASGAAMGNTPSQDPDRTSTHMISADDAEYPREYRTLGNGTRRFSNVGLVHTSERRHTVIAAQSLEALTGLQKSEMERKRDAFMDHLKNKYPQHALALRGQQERMRDQQPNYWSFKTRSSRHSQGSQPGLADQAKLSFASAESLETMSEAELPLGFNRMNRFRQSLPLSRSTSQTKLRSPGVLFLQFGDETRRVHITHEISSMDTLHALIVHMFPQKLTMGMLKSPNTAILIKDESRNVFYELEDVRDIQDRSIIKIYRKEPLYASFPASHITNGDLRREMVYTSRESSPTRRLNNMSPASHLASGSPPPVLQSSSPSRSRMSYSGGRPPSYAGSPVHHGERLSNLPPAPGVSPSPSAILERRDVKPDEDLAGKNMVLVKNEGLYADPYGMVHEGRLSITSTQSLAGMGDPFGYSGGLYKRGSVRSLSTYSAAALQTELEDGLYKPNAQIYSDTYGPGLGFRMPPSSPQKMSDGRLVDVQPGQSPHSPYSGPPSRSSPVRQSFRKDSCSSVFMDSPVSKPRNPSASGPPELFPGPGDRPLSGFSSPVPAKDTETRERMEAMEKQIASLTGLVQSALLRGSEAETPSEKTEATNGGTPPSASTSRSGMGTPVPAPPPPSATSTPAGQPTAITRLHMQLHLHDLQQNASDLRNQLQQLKKLQLQNQETVKTMLRRTETEISVRVTDTMRKHEDPLQRQRSLVEEERLRYLNEEELITQQLNDLEKSVEKIQKDLAHNHRLIPVQELEEKAVVLKQLGETLTDLKAQFPSLQSKMRVVLRVEVEAVKFLKEEPNRLDGLLKRCKTVTDTLAQIRRQVDEGVWTPPNTLSQSPKKMAPETDFSKGLELEMPTSPPVSLHHLTAATETLGMPSFGHSPPQTQTHPSKSNNPSRAPEMVPAKTQTGPETPSKKSADKAVSVEAAERDWEEKRAALTQYSAKDINRLLEETQAELMKAIPDLDFAAKHKQATGSSSAASTPEHKPSKPQHAQKSAGKADPNGRRGSDELTVPRYRTEKPSKSPPPPPPRRSFPSSHGLTTTRSGEVIVTSKKEPGFMKKAESEELETQKPQVKLRRTVSEVVRPASTPPIIASAIKDDDDEDRIIAELEVFQRSSASPFIPKLGYDPLTAAASPGHAAMWPNGAEGWKEPVAPAPPGSRAFSLPQIVLTECESAPPSPESDPEVPVATGCSEHGDPAGSGAAGGELAPEAGGRCHVSAGTPRKSPSTPGGLPASAPQPQIAPSQGRERAPGETHGFPPADSKVPSPPARGASQPMGAEGEDTAPSPAGRQEGSSQPAPRGPVAEQPPRGQAADRGAEDTVLVPGAGTQGSGAVPSDAEPRGGGRQSTREASVPPGRSDGVCKRRDHRDGSPVPKARRPPGCDHIQGREWCQAGHPRGQVAASPGSQRCAASPGQDSVGLAAGAGGGEEDAGGKAAEGLCCPAPGGRSEGDVPPLHSMSPRSKEIYEGTYQRLDSLEETIRELEMTISEISSHPAAGLMFPKGLLGQAAPDGSEEMKARAGHLQHSGGDGGTALDLSQPKGDAPESSPPSQTKPPLLPKPQLPLSSPQSGGVSIPAMKMVNPASRLKQSQQGSPDKSKHIKQRMEYMRIQGQQQAARPSKEASETSPAVSEKPASGRTSIPVLTSFGARNSSISF
SIO_010081: SRCIN1
subclass of: SO_0000673
so part of: SRCIN1
location: complement(join(765629..765754,768173..768310,770498..771754,772928..773044,773393..773545,773624..773778,773916..774165,774482..774794,775679..775826,776706..776836,777078..777253,777408..777586,777914..777957,778069..778161,778525..779354,779757..779850,780378..780576,780693..780885,790946..790969,801376..801659,829050..829221))
location: region:765629-829221:-1
so has part: feature:829050-829221:-1:exon
so has part: feature:801376-801659:-1:exon
so has part: feature:790946-790969:-1:exon
so has part: feature:780693-780885:-1:exon
so has part: feature:780378-780576:-1:exon
so has part: feature:779757-779850:-1:exon
so has part: feature:778525-779354:-1:exon
so has part: feature:778069-778161:-1:exon
so has part: feature:777914-777957:-1:exon
so has part: feature:777408-777586:-1:exon
so has part: feature:777078-777253:-1:exon
so has part: feature:776706-776836:-1:exon
so has part: feature:775679-775826:-1:exon
so has part: feature:774482-774794:-1:exon
so has part: feature:773916-774165:-1:exon
so has part: feature:773624-773778:-1:exon
so has part: feature:773393-773545:-1:exon
so has part: feature:772928-773044:-1:exon
so has part: feature:770498-771754:-1:exon
so has part: feature:768173-768310:-1:exon
so has part: feature:765629-765754:-1:exon

XP_038024540.1
type: Protein
SIO_000068: ncbiprotein

position:765629:-1
position: 765629
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:829221:-1
position: 829221
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:829050-829221:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:801376-801659:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:790946-790969:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:780693-780885:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:780378-780576:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:779757-779850:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:778525-779354:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:778069-778161:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:777914-777957:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:777408-777586:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:777078-777253:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:776706-776836:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:775679-775826:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:774482-774794:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:773916-774165:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:773624-773778:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:773393-773545:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:772928-773044:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:770498-771754:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:768173-768310:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:765629-765754:-1:exon

SRCIN1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8839
gene: SRCIN1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: SRC kinase signaling inhibitor 1 isoform X3
translation: MRFWSRAPSSLLVPLGCLGATMLPRWAKHPFGASPRAAPRLREQERPSEPGDCRLTPLLVDPDRTSTHMISADDAEYPREYRTLGNGTRRFSNVGLVHTSERRHTVIAAQSLEALTGLQKSEMERKRDAFMDHLKNKYPQHALALRGQQERMRDQTRSSRHSQGSQPGLADQAKLSFASAESLETMSEAELPLGFNRMNRFRQSLPLSRSTSQTKLRSPGVLFLQFGDETRRVHITHEISSMDTLHALIVHMFPQKLTMGMLKSPNTAILIKDESRNVFYELEDVRDIQDRSIIKIYRKEPLYASFPASHITNGDLRREMVYTSRESSPTRRLNNMSPASHLASGSPPPVLQSSSPSRSRMSYSGGRPPSYAGSPVHHGERLSNLPPAPGVSPSPSAILERRDVKPDEDLAGKNMVLVKNEGLYADPYGMVHEGRLSITSTQSLAGMGDPFGYSGGLYKRGSVRSLSTYSAAALQTELEDGLYKPNAQIYSDTYGPGLGFRMPPSSPQKMSDGRLVDVQPGQSPHSPYSGPPSRSSPVRQSFRKDSCSSVFMDSPVSKPRNPSASGPPELFPGPGDRPLSGFSSPVPAKDTETRERMEAMEKQIASLTGLVQSALLRGSEAETPSEKTEATNGGTPPSASTSRSGMGTPVPAPPPPSATSTPAGQPTAITRLHMQLHLHDLQQNASDLRNQLQQLKKLQLQNQETVKTMLRRTETEISVRVTDTMRKHEDPLQRQRSLVEEERLRYLNEEELITQQLNDLEKSVEKIQKDLAHNHRLIPVQELEEKAVVLKQLGETLTDLKAQFPSLQSKMRVVLRVEVEAVKFLKEEPNRLDGLLKRCKTVTDTLAQIRRQVDEGVWTPPNTLSQSPKKMAPETDFSKGLELEMPTSPPVSLHHLTAATETLGMPSFGHSPPQTQTHPSKSNNPSRAPEMVPAKTQTGPETPSKKSADKAVSVEAAERDWEEKRAALTQYSAKDINRLLEETQAELMKAIPDLDFAAKHKQATGSSSAASTPEHKPSKPQHAQKSAGKADPNGRRGSDELTVPRYRTEKPSKSPPPPPPRRSFPSSHGLTTTRSGEVIVTSKKEPGFMKKAESEELETQKPQVKLRRTVSEVVRPASTPPIIASAIKDDDDEDRIIAELEVFQRSSASPFIPKLGYDPLTAAASPGHAAMWPNGAEGWKEPVAPAPPGSRAFSLPQIVLTECESAPPSPESDPEVPVATGCSEHGDPAGSGAAGGELAPEAGGRCHVSAGTPRKSPSTPGGLPASAPQPQIAPSQGRERAPGETHGFPPADSKVPSPPARGASQPMGAEGEDTAPSPAGRQEGSSQPAPRGPVAEQPPRGQAADRGAEDTVLVPGAGTQGSGAVPSDAEPRGGGRQSTREASVPPGRSDGVCKRRDHRDGSPVPKARRPPGCDHIQGREWCQAGHPRGQVAASPGSQRCAASPGQDSVGLAAGAGGGEEDAGGKAAEGLCCPAPGGRSEGDVPPLHSMSPRSKEIYEGTYQRLDSLEETIRELEMTISEISSHPAAGLMFPKGLLGQAAPDGSEEMKARAGHLQHSGGDGGTALDLSQPKGDAPESSPPSQTKPPLLPKPQLPLSSPQSGGVSIPAMKMVNPASRLKQSQQGSPDKSKHIKQRMEYMRIQGQQQAARPSKEASETSPAVSEKPASGRTSIPVLTSFGARNSSISF
SIO_010081: SRCIN1
subclass of: SO_0000673
so part of: SRCIN1
location: complement(join(765629..765754,768173..768310,770498..771754,772928..773044,773393..773545,773624..773778,773916..774165,774482..774794,775679..775826,776706..776836,777078..777253,777408..777586,777914..777957,778069..778161,778525..779354,779757..779850,780378..780576,780693..780885,801376..801659,810804..810979,811200..811204))
location: region:765629-811204:-1
so has part: feature:811200-811204:-1:exon
so has part: feature:810804-810979:-1:exon
so has part: feature:801376-801659:-1:exon
so has part: feature:780693-780885:-1:exon
so has part: feature:780378-780576:-1:exon
so has part: feature:779757-779850:-1:exon
so has part: feature:778525-779354:-1:exon
so has part: feature:778069-778161:-1:exon
so has part: feature:777914-777957:-1:exon
so has part: feature:777408-777586:-1:exon
so has part: feature:777078-777253:-1:exon
so has part: feature:776706-776836:-1:exon
so has part: feature:775679-775826:-1:exon
so has part: feature:774482-774794:-1:exon
so has part: feature:773916-774165:-1:exon
so has part: feature:773624-773778:-1:exon
so has part: feature:773393-773545:-1:exon
so has part: feature:772928-773044:-1:exon
so has part: feature:770498-771754:-1:exon
so has part: feature:768173-768310:-1:exon
so has part: feature:765629-765754:-1:exon

XP_038024541.1
type: Protein
SIO_000068: ncbiprotein

position:811204:-1
position: 811204
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:811200-811204:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:810804-810979:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:801376-801659:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:780693-780885:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:780378-780576:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:779757-779850:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:778525-779354:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:778069-778161:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:777914-777957:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:777408-777586:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:777078-777253:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:776706-776836:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:775679-775826:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:774482-774794:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:773916-774165:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:773624-773778:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:773393-773545:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:772928-773044:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:770498-771754:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:768173-768310:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:765629-765754:-1:exon

SRCIN1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8839
gene: SRCIN1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: SRC kinase signaling inhibitor 1 isoform X9
translation: MRFWSRAPSSLLVPLGCLGATMLPRWAKHPFGASPRAAPRLREQERPSEPGDCRLTPLLVDPDRTSTHMISADDAEYPREYRTLGNGTRRFSNVGLVHTSERRHTVIAAQSLEALTGLQKSEMERKRDAFMDHLKNKYPQHALALRGQQERMRDQQPNYWSFKTRSSRHSQGSQPGLADQAKLSFASAESLETMSEAELPLGFNRMNRFRQSLPLSRSTSQTKLRSPGVLFLQFGDETRRVHITHEISSMDTLHALIVHMFPQKLTMGMLKSPNTAILIKDESRNVFYELEDVRDIQDRSIIKIYRKEPLYASFPASHITNGDLRREMVYTSRESSPTRRLNNMSPASHLASGSPPPVLQSSSPSRSRMSYSGGRPPSYAGSPVHHGERLSNLPPAPGVSPSPSAILERRDVKPDEDLAGKNMVLVKNEGLYADPYGMVHEGRLSITSTQSLAGMGDPFGYSGGLYKRGSVRSLSTYSAAALQTELEDGLYKPNAQIYSDTYGPGLGFRMPPSSPQKMSDGRLVDVQPGQSPHSPYSGPPSRSSPVRQSFRKDSCSSVFMDSPVSKPRNPSASGPPELFPGPGDRPLSGFSSPVPAKDTETRERMEAMEKQIASLTGLVQSALLRGSEAETPSEKTEATNGGTPPSASTSRSGMGTPVPAPPPPSATSTPAGQPTAITRLHMQLHLHDLQQNASDLRNQLQQLKKLQLQNQETVKTMLRRTETEISVRVTDTMRKHEDPLQRQRSLVEEERLRYLNEEELITQQLNDLEKSVEKIQKDLAHNHRLIPVQELEEKAVVLKQLGETLTDLKAQFPSLQSKMRVVLRVEVEAVKFLKEEPNRLDGLLKRCKTVTDTLAQIRRQVDEGVWTPPNTLSQSPKKMAPETDFSKGLELEMPTSPPVSLHHLTAATETLGMPSFGHSPPQTQTHPSKSNNPSRAPEMVPAKTQTGPETPSKKSADKAVSVEAAERDWEEKRAALTQYSAKDINRLLEETQAELMKAIPDLDFAAKHKQATGSSSAASTPEHKPSKPQHAQKSAGKADPNGRRGSDELTVPRYRTEKPSKSPPPPPPRRSFPSSHGLTTTRSGEVIVTSKKEPGFMKKAESEELETQKPQVKLRRTVSEVVRPASTPPIIASAIKDDDDEDRIIAELESGGVSIPAMKMVNPASRLKQSQQGSPDKSKHIKQRMEYMRIQGQQQAARPSKEASETSPAVSEKPASGRTSIPVLTSFGARNSSISF
SIO_010081: SRCIN1
subclass of: SO_0000673
so part of: SRCIN1
location: complement(join(765629..765754,768173..768310,773393..773545,773624..773778,773916..774165,774482..774794,775679..775826,776706..776836,777078..777253,777408..777586,777914..777957,778069..778161,778525..779354,779757..779850,780378..780576,780693..780885,790946..790969,801376..801659,810804..810979,811200..811204))
location: region:765629-811204:-1
so has part: feature:811200-811204:-1:exon
so has part: feature:810804-810979:-1:exon
so has part: feature:801376-801659:-1:exon
so has part: feature:790946-790969:-1:exon
so has part: feature:780693-780885:-1:exon
so has part: feature:780378-780576:-1:exon
so has part: feature:779757-779850:-1:exon
so has part: feature:778525-779354:-1:exon
so has part: feature:778069-778161:-1:exon
so has part: feature:777914-777957:-1:exon
so has part: feature:777408-777586:-1:exon
so has part: feature:777078-777253:-1:exon
so has part: feature:776706-776836:-1:exon
so has part: feature:775679-775826:-1:exon
so has part: feature:774482-774794:-1:exon
so has part: feature:773916-774165:-1:exon
so has part: feature:773624-773778:-1:exon
so has part: feature:773393-773545:-1:exon
so has part: feature:768173-768310:-1:exon
so has part: feature:765629-765754:-1:exon

XP_038024549.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:811200-811204:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:810804-810979:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:801376-801659:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:790946-790969:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:780693-780885:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:780378-780576:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:779757-779850:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:778525-779354:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:778069-778161:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:777914-777957:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:777408-777586:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:777078-777253:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:776706-776836:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:775679-775826:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:774482-774794:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:773916-774165:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:773624-773778:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:773393-773545:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:768173-768310:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:765629-765754:-1:exon

SRCIN1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8839
gene: SRCIN1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: SRC kinase signaling inhibitor 1 isoform X8
translation: MRFWSRAPSSLLVPLGCLGATMLPRWAKHPFGASPRAAPRLREQERPSEPGDCRLTPLLVDPDRTSTHMISADDAEYPREYRTLGNGTRRFSNVGLVHTSERRHTVIAAQSLEALTGLQKSEMERKRDAFMDHLKNKYPQHALALRGQQERMRDQQPNYWSFKTRSSRHSQGSQPGLADQAKLSFASAESLETMSEAELPLGFNRMNRFRQSLPLSRSTSQTKLRSPGVLFLQFGDETRRVHITHEISSMDTLHALIVHMFPQKLTMGMLKSPNTAILIKDESRNVFYELEDVRDIQDRSIIKIYRKEPLYASFPASHITNGDLRREMVYTSRESSPTRRLNNMSPASHLASGSPPPVLQSSSPSRSRMSYSGGRPPSYAGSPVHHGERLSNLPPAPGVSPSPSAILERRDVKPDEDLAGKNMVLVKNEGLYADPYGMVHEGRLSITSTQSLAGMGDPFGYSGGLYKRGSVRSLSTYSAAALQTELEDGLYKPNAQIYSDTYGPGLGFRMPPSSPQKMSDGRLVDVQPGQSPHSPYSGPPSRSSPVRQSFRKDSCSSVFMDSPVSKPRNPSASGPPELFPGPGDRPLSGFSSPVPAKDTETRERMEAMEKQIASLTGLVQSALLRGSEAETPSEKTEATNGGTPPSASTSRSGMGTPVPAPPPPSATSTPAGQPTAITRLHMQLHLHDLQQNASDLRNQLQQLKKLQLQNQETVKTMLRRTETEISVRVTDTMRKHEDPLQRQRSLVEEERLRYLNEEELITQQLNDLEKSVEKIQKDLAHNHRLIPVQELEEKAVVLKQLGETLTDLKAQFPSLQSKMRVVLRVEVEAVKFLKEEPNRLDGLLKRCKTVTDTLAQIRRQVDEGVWTPPNTLSQSPKKMAPETDFSKGLELEMPTSPPVSLHHLTAATETLGMPSFGHSPPQTQTHPSKSNNPSRAPEMVPAKTQTGPETPSKKSADKAVSVEAAERDWEEKRAALTQYSAKDINRLLEETQAELMKAIPDLDFAAKHKQATGSSSAASTPEHKPSKPQHAQKSAGKADPNGRRGSDELTVPRYRTEKPSKSPPPPPPRRSFPSSHGLTTTRSGEVIVTSKKEPGFMKKAESEELETQKPQVKLRRTVSEVVRPASTPPIIASAIKDDDDEDRIIAELEVFQRSSASPFIPKLGYDPLTAAASPGHAAMWPNGAEGWKSGGVSIPAMKMVNPASRLKQSQQGSPDKSKHIKQRMEYMRIQGQQQAARPSKEASETSPAVSEKPASGRTSIPVLTSFGARNSSISF
SIO_010081: SRCIN1
subclass of: SO_0000673
so part of: SRCIN1
location: complement(join(765629..765754,768173..768310,772928..773044,773393..773545,773624..773778,773916..774165,774482..774794,775679..775826,776706..776836,777078..777253,777408..777586,777914..777957,778069..778161,778525..779354,779757..779850,780378..780576,780693..780885,790946..790969,801376..801659,810804..810979,811200..811204))
location: region:765629-811204:-1
so has part: feature:811200-811204:-1:exon
so has part: feature:810804-810979:-1:exon
so has part: feature:801376-801659:-1:exon
so has part: feature:790946-790969:-1:exon
so has part: feature:780693-780885:-1:exon
so has part: feature:780378-780576:-1:exon
so has part: feature:779757-779850:-1:exon
so has part: feature:778525-779354:-1:exon
so has part: feature:778069-778161:-1:exon
so has part: feature:777914-777957:-1:exon
so has part: feature:777408-777586:-1:exon
so has part: feature:777078-777253:-1:exon
so has part: feature:776706-776836:-1:exon
so has part: feature:775679-775826:-1:exon
so has part: feature:774482-774794:-1:exon
so has part: feature:773916-774165:-1:exon
so has part: feature:773624-773778:-1:exon
so has part: feature:773393-773545:-1:exon
so has part: feature:772928-773044:-1:exon
so has part: feature:768173-768310:-1:exon
so has part: feature:765629-765754:-1:exon

XP_038024548.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:811200-811204:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:810804-810979:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:801376-801659:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:790946-790969:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:780693-780885:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:780378-780576:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:779757-779850:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:778525-779354:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:778069-778161:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:777914-777957:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:777408-777586:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:777078-777253:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:776706-776836:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:775679-775826:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:774482-774794:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:773916-774165:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:773624-773778:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:773393-773545:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:772928-773044:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:768173-768310:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:765629-765754:-1:exon

SRCIN1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8839
gene: SRCIN1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: SRC kinase signaling inhibitor 1 isoform X1
translation: MRFWSRAPSSLLVPLGCLGATMLPRWAKHPFGASPRAAPRLREQERPSEPGDCRLTPLLVDPDRTSTHMISADDAEYPREYRTLGNGTRRFSNVGLVHTSERRHTVIAAQSLEALTGLQKSEMERKRDAFMDHLKNKYPQHALALRGQQERMRDQQPNYWSFKTRSSRHSQGSQPGLADQAKLSFASAESLETMSEAELPLGFNRMNRFRQSLPLSRSTSQTKLRSPGVLFLQFGDETRRVHITHEISSMDTLHALIVHMFPQKLTMGMLKSPNTAILIKDESRNVFYELEDVRDIQDRSIIKIYRKEPLYASFPASHITNGDLRREMVYTSRESSPTRRLNNMSPASHLASGSPPPVLQSSSPSRSRMSYSGGRPPSYAGSPVHHGERLSNLPPAPGVSPSPSAILERRDVKPDEDLAGKNMVLVKNEGLYADPYGMVHEGRLSITSTQSLAGMGDPFGYSGGLYKRGSVRSLSTYSAAALQTELEDGLYKPNAQIYSDTYGPGLGFRMPPSSPQKMSDGRLVDVQPGQSPHSPYSGPPSRSSPVRQSFRKDSCSSVFMDSPVSKPRNPSASGPPELFPGPGDRPLSGFSSPVPAKDTETRERMEAMEKQIASLTGLVQSALLRGSEAETPSEKTEATNGGTPPSASTSRSGMGTPVPAPPPPSATSTPAGQPTAITRLHMQLHLHDLQQNASDLRNQLQQLKKLQLQNQETVKTMLRRTETEISVRVTDTMRKHEDPLQRQRSLVEEERLRYLNEEELITQQLNDLEKSVEKIQKDLAHNHRLIPVQELEEKAVVLKQLGETLTDLKAQFPSLQSKMRVVLRVEVEAVKFLKEEPNRLDGLLKRCKTVTDTLAQIRRQVDEGVWTPPNTLSQSPKKMAPETDFSKGLELEMPTSPPVSLHHLTAATETLGMPSFGHSPPQTQTHPSKSNNPSRAPEMVPAKTQTGPETPSKKSADKAVSVEAAERDWEEKRAALTQYSAKDINRLLEETQAELMKAIPDLDFAAKHKQATGSSSAASTPEHKPSKPQHAQKSAGKADPNGRRGSDELTVPRYRTEKPSKSPPPPPPRRSFPSSHGLTTTRSGEVIVTSKKEPGFMKKAESEELETQKPQVKLRRTVSEVVRPASTPPIIASAIKDDDDEDRIIAELEVFQRSSASPFIPKLGYDPLTAAASPGHAAMWPNGAEGWKEPVAPAPPGSRAFSLPQIVLTECESAPPSPESDPEVPVATGCSEHGDPAGSGAAGGELAPEAGGRCHVSAGTPRKSPSTPGGLPASAPQPQIAPSQGRERAPGETHGFPPADSKVPSPPARGASQPMGAEGEDTAPSPAGRQEGSSQPAPRGPVAEQPPRGQAADRGAEDTVLVPGAGTQGSGAVPSDAEPRGGGRQSTREASVPPGRSDGVCKRRDHRDGSPVPKARRPPGCDHIQGREWCQAGHPRGQVAASPGSQRCAASPGQDSVGLAAGAGGGEEDAGGKAAEGLCCPAPGGRSEGDVPPLHSMSPRSKEIYEGTYQRLDSLEETIRELEMTISEISSHPAAGLMFPKGLLGQAAPDGSEEMKARAGHLQHSGGDGGTALDLSQPKGDAPESSPPSQTKPPLLPKPQLPLSSPQSGGVSIPAMKMVNPASRLKQSQQGSPDKSKHIKQRMEYMRIQGQQQAARPSKEASETSPAVSEKPASGRTSIPVLTSFGARNSSISF
SIO_010081: SRCIN1
subclass of: SO_0000673
so part of: SRCIN1
location: complement(join(765629..765754,768173..768310,770498..771754,772928..773044,773393..773545,773624..773778,773916..774165,774482..774794,775679..775826,776706..776836,777078..777253,777408..777586,777914..777957,778069..778161,778525..779354,779757..779850,780378..780576,780693..780885,790946..790969,801376..801659,810804..810979,811200..811204))
location: region:765629-811204:-1
so has part: feature:811200-811204:-1:exon
so has part: feature:810804-810979:-1:exon
so has part: feature:801376-801659:-1:exon
so has part: feature:790946-790969:-1:exon
so has part: feature:780693-780885:-1:exon
so has part: feature:780378-780576:-1:exon
so has part: feature:779757-779850:-1:exon
so has part: feature:778525-779354:-1:exon
so has part: feature:778069-778161:-1:exon
so has part: feature:777914-777957:-1:exon
so has part: feature:777408-777586:-1:exon
so has part: feature:777078-777253:-1:exon
so has part: feature:776706-776836:-1:exon
so has part: feature:775679-775826:-1:exon
so has part: feature:774482-774794:-1:exon
so has part: feature:773916-774165:-1:exon
so has part: feature:773624-773778:-1:exon
so has part: feature:773393-773545:-1:exon
so has part: feature:772928-773044:-1:exon
so has part: feature:770498-771754:-1:exon
so has part: feature:768173-768310:-1:exon
so has part: feature:765629-765754:-1:exon

XP_038024539.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:811200-811204:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:810804-810979:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:801376-801659:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:790946-790969:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:780693-780885:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:780378-780576:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:779757-779850:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:778525-779354:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:778069-778161:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:777914-777957:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:777408-777586:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:777078-777253:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:776706-776836:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:775679-775826:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:774482-774794:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:773916-774165:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:773624-773778:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:773393-773545:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:772928-773044:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:770498-771754:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:768173-768310:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:765629-765754:-1:exon

SRCIN1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8839
gene: SRCIN1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: SRC kinase signaling inhibitor 1 isoform X4
translation: MLPRWAKHPFGASPRAAPRLREQERPSEPGDCRLTPLLVDPDRTSTHMISADDAEYPREYRTLGNGTRRFSNVGLVHTSERRHTVIAAQSLEALTGLQKSEMERKRDAFMDHLKNKYPQHALALRGQQERMRDQQPNYWSFKTRSSRHSQGSQPGLADQAKLSFASAESLETMSEAELPLGFNRMNRFRQSLPLSRSTSQTKLRSPGVLFLQFGDETRRVHITHEISSMDTLHALIVHMFPQKLTMGMLKSPNTAILIKDESRNVFYELEDVRDIQDRSIIKIYRKEPLYASFPASHITNGDLRREMVYTSRESSPTRRLNNMSPASHLASGSPPPVLQSSSPSRSRMSYSGGRPPSYAGSPVHHGERLSNLPPAPGVSPSPSAILERRDVKPDEDLAGKNMVLVKNEGLYADPYGMVHEGRLSITSTQSLAGMGDPFGYSGGLYKRGSVRSLSTYSAAALQTELEDGLYKPNAQIYSDTYGPGLGFRMPPSSPQKMSDGRLVDVQPGQSPHSPYSGPPSRSSPVRQSFRKDSCSSVFMDSPVSKPRNPSASGPPELFPGPGDRPLSGFSSPVPAKDTETRERMEAMEKQIASLTGLVQSALLRGSEAETPSEKTEATNGGTPPSASTSRSGMGTPVPAPPPPSATSTPAGQPTAITRLHMQLHLHDLQQNASDLRNQLQQLKKLQLQNQETVKTMLRRTETEISVRVTDTMRKHEDPLQRQRSLVEEERLRYLNEEELITQQLNDLEKSVEKIQKDLAHNHRLIPVQELEEKAVVLKQLGETLTDLKAQFPSLQSKMRVVLRVEVEAVKFLKEEPNRLDGLLKRCKTVTDTLAQIRRQVDEGVWTPPNTLSQSPKKMAPETDFSKGLELEMPTSPPVSLHHLTAATETLGMPSFGHSPPQTQTHPSKSNNPSRAPEMVPAKTQTGPETPSKKSADKAVSVEAAERDWEEKRAALTQYSAKDINRLLEETQAELMKAIPDLDFAAKHKQATGSSSAASTPEHKPSKPQHAQKSAGKADPNGRRGSDELTVPRYRTEKPSKSPPPPPPRRSFPSSHGLTTTRSGEVIVTSKKEPGFMKKAESEELETQKPQVKLRRTVSEVVRPASTPPIIASAIKDDDDEDRIIAELEVFQRSSASPFIPKLGYDPLTAAASPGHAAMWPNGAEGWKEPVAPAPPGSRAFSLPQIVLTECESAPPSPESDPEVPVATGCSEHGDPAGSGAAGGELAPEAGGRCHVSAGTPRKSPSTPGGLPASAPQPQIAPSQGRERAPGETHGFPPADSKVPSPPARGASQPMGAEGEDTAPSPAGRQEGSSQPAPRGPVAEQPPRGQAADRGAEDTVLVPGAGTQGSGAVPSDAEPRGGGRQSTREASVPPGRSDGVCKRRDHRDGSPVPKARRPPGCDHIQGREWCQAGHPRGQVAASPGSQRCAASPGQDSVGLAAGAGGGEEDAGGKAAEGLCCPAPGGRSEGDVPPLHSMSPRSKEIYEGTYQRLDSLEETIRELEMTISEISSHPAAGLMFPKGLLGQAAPDGSEEMKARAGHLQHSGGDGGTALDLSQPKGDAPESSPPSQTKPPLLPKPQLPLSSPQSGGVSIPAMKMVNPASRLKQSQQGSPDKSKHIKQRMEYMRIQGQQQAARPSKEASETSPAVSEKPASGRTSIPVLTSFGARNSSISF
SIO_010081: SRCIN1
subclass of: SO_0000673
so part of: SRCIN1
location: complement(join(765629..765754,768173..768310,770498..771754,772928..773044,773393..773545,773624..773778,773916..774165,774482..774794,775679..775826,776706..776836,777078..777253,777408..777586,777914..777957,778069..778161,778525..779354,779757..779850,780378..780576,780693..780885,790946..790969,801376..801659,810804..810921))
location: region:765629-810921:-1
so has part: feature:810804-810921:-1:exon
so has part: feature:801376-801659:-1:exon
so has part: feature:790946-790969:-1:exon
so has part: feature:780693-780885:-1:exon
so has part: feature:780378-780576:-1:exon
so has part: feature:779757-779850:-1:exon
so has part: feature:778525-779354:-1:exon
so has part: feature:778069-778161:-1:exon
so has part: feature:777914-777957:-1:exon
so has part: feature:777408-777586:-1:exon
so has part: feature:777078-777253:-1:exon
so has part: feature:776706-776836:-1:exon
so has part: feature:775679-775826:-1:exon
so has part: feature:774482-774794:-1:exon
so has part: feature:773916-774165:-1:exon
so has part: feature:773624-773778:-1:exon
so has part: feature:773393-773545:-1:exon
so has part: feature:772928-773044:-1:exon
so has part: feature:770498-771754:-1:exon
so has part: feature:768173-768310:-1:exon
so has part: feature:765629-765754:-1:exon

XP_038024542.1
type: Protein
SIO_000068: ncbiprotein

position:810921:-1
position: 810921
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:810804-810921:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:801376-801659:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:790946-790969:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:780693-780885:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:780378-780576:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:779757-779850:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:778525-779354:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:778069-778161:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:777914-777957:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:777408-777586:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:777078-777253:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:776706-776836:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:775679-775826:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:774482-774794:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:773916-774165:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:773624-773778:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:773393-773545:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:772928-773044:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:770498-771754:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:768173-768310:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:765629-765754:-1:exon

SRCIN1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8839
gene: SRCIN1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: SRC kinase signaling inhibitor 1 isoform X6
translation: MISADDAEYPREYRTLGNGTRRFSNVGLVHTSERRHTVIAAQSLEALTGLQKSEMERKRDAFMDHLKNKYPQHALALRGQQERMRDQQPNYWSFKTRSSRHSQGSQPGLADQAKLSFASAESLETMSEAELPLGFNRMNRFRQSLPLSRSTSQTKLRSPGVLFLQFGDETRRVHITHEISSMDTLHALIVHMFPQKLTMGMLKSPNTAILIKDESRNVFYELEDVRDIQDRSIIKIYRKEPLYASFPASHITNGDLRREMVYTSRESSPTRRLNNMSPASHLASGSPPPVLQSSSPSRSRMSYSGGRPPSYAGSPVHHGERLSNLPPAPGVSPSPSAILERRDVKPDEDLAGKNMVLVKNEGLYADPYGMVHEGRLSITSTQSLAGMGDPFGYSGGLYKRGSVRSLSTYSAAALQTELEDGLYKPNAQIYSDTYGPGLGFRMPPSSPQKMSDGRLVDVQPGQSPHSPYSGPPSRSSPVRQSFRKDSCSSVFMDSPVSKPRNPSASGPPELFPGPGDRPLSGFSSPVPAKDTETRERMEAMEKQIASLTGLVQSALLRGSEAETPSEKTEATNGGTPPSASTSRSGMGTPVPAPPPPSATSTPAGQPTAITRLHMQLHLHDLQQNASDLRNQLQQLKKLQLQNQETVKTMLRRTETEISVRVTDTMRKHEDPLQRQRSLVEEERLRYLNEEELITQQLNDLEKSVEKIQKDLAHNHRLIPVQELEEKAVVLKQLGETLTDLKAQFPSLQSKMRVVLRVEVEAVKFLKEEPNRLDGLLKRCKTVTDTLAQIRRQVDEGVWTPPNTLSQSPKKMAPETDFSKGLELEMPTSPPVSLHHLTAATETLGMPSFGHSPPQTQTHPSKSNNPSRAPEMVPAKTQTGPETPSKKSADKAVSVEAAERDWEEKRAALTQYSAKDINRLLEETQAELMKAIPDLDFAAKHKQATGSSSAASTPEHKPSKPQHAQKSAGKADPNGRRGSDELTVPRYRTEKPSKSPPPPPPRRSFPSSHGLTTTRSGEVIVTSKKEPGFMKKAESEELETQKPQVKLRRTVSEVVRPASTPPIIASAIKDDDDEDRIIAELEVFQRSSASPFIPKLGYDPLTAAASPGHAAMWPNGAEGWKEPVAPAPPGSRAFSLPQIVLTECESAPPSPESDPEVPVATGCSEHGDPAGSGAAGGELAPEAGGRCHVSAGTPRKSPSTPGGLPASAPQPQIAPSQGRERAPGETHGFPPADSKVPSPPARGASQPMGAEGEDTAPSPAGRQEGSSQPAPRGPVAEQPPRGQAADRGAEDTVLVPGAGTQGSGAVPSDAEPRGGGRQSTREASVPPGRSDGVCKRRDHRDGSPVPKARRPPGCDHIQGREWCQAGHPRGQVAASPGSQRCAASPGQDSVGLAAGAGGGEEDAGGKAAEGLCCPAPGGRSEGDVPPLHSMSPRSKEIYEGTYQRLDSLEETIRELEMTISEISSHPAAGLMFPKGLLGQAAPDGSEEMKARAGHLQHSGGDGGTALDLSQPKGDAPESSPPSQTKPPLLPKPQLPLSSPQSGGVSIPAMKMVNPASRLKQSQQGSPDKSKHIKQRMEYMRIQGQQQAARPSKEASETSPAVSEKPASGRTSIPVLTSFGARNSSISF
SIO_010081: SRCIN1
subclass of: SO_0000673
so part of: SRCIN1
location: complement(join(765629..765754,768173..768310,770498..771754,772928..773044,773393..773545,773624..773778,773916..774165,774482..774794,775679..775826,776706..776836,777078..777253,777408..777586,777914..777957,778069..778161,778525..779354,779757..779850,780378..780576,780693..780885,790946..790969,801376..801636))
location: region:765629-801636:-1
so has part: feature:801376-801636:-1:exon
so has part: feature:790946-790969:-1:exon
so has part: feature:780693-780885:-1:exon
so has part: feature:780378-780576:-1:exon
so has part: feature:779757-779850:-1:exon
so has part: feature:778525-779354:-1:exon
so has part: feature:778069-778161:-1:exon
so has part: feature:777914-777957:-1:exon
so has part: feature:777408-777586:-1:exon
so has part: feature:777078-777253:-1:exon
so has part: feature:776706-776836:-1:exon
so has part: feature:775679-775826:-1:exon
so has part: feature:774482-774794:-1:exon
so has part: feature:773916-774165:-1:exon
so has part: feature:773624-773778:-1:exon
so has part: feature:773393-773545:-1:exon
so has part: feature:772928-773044:-1:exon
so has part: feature:770498-771754:-1:exon
so has part: feature:768173-768310:-1:exon
so has part: feature:765629-765754:-1:exon

XP_038024544.1
type: Protein
SIO_000068: ncbiprotein

position:801636:-1
position: 801636
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:801376-801636:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:790946-790969:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:780693-780885:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:780378-780576:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:779757-779850:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:778525-779354:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:778069-778161:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:777914-777957:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:777408-777586:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:777078-777253:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:776706-776836:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:775679-775826:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:774482-774794:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:773916-774165:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:773624-773778:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:773393-773545:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:772928-773044:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:770498-771754:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:768173-768310:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:765629-765754:-1:exon

SRCIN1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8839
gene: SRCIN1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: SRC kinase signaling inhibitor 1 isoform X6
translation: MISADDAEYPREYRTLGNGTRRFSNVGLVHTSERRHTVIAAQSLEALTGLQKSEMERKRDAFMDHLKNKYPQHALALRGQQERMRDQQPNYWSFKTRSSRHSQGSQPGLADQAKLSFASAESLETMSEAELPLGFNRMNRFRQSLPLSRSTSQTKLRSPGVLFLQFGDETRRVHITHEISSMDTLHALIVHMFPQKLTMGMLKSPNTAILIKDESRNVFYELEDVRDIQDRSIIKIYRKEPLYASFPASHITNGDLRREMVYTSRESSPTRRLNNMSPASHLASGSPPPVLQSSSPSRSRMSYSGGRPPSYAGSPVHHGERLSNLPPAPGVSPSPSAILERRDVKPDEDLAGKNMVLVKNEGLYADPYGMVHEGRLSITSTQSLAGMGDPFGYSGGLYKRGSVRSLSTYSAAALQTELEDGLYKPNAQIYSDTYGPGLGFRMPPSSPQKMSDGRLVDVQPGQSPHSPYSGPPSRSSPVRQSFRKDSCSSVFMDSPVSKPRNPSASGPPELFPGPGDRPLSGFSSPVPAKDTETRERMEAMEKQIASLTGLVQSALLRGSEAETPSEKTEATNGGTPPSASTSRSGMGTPVPAPPPPSATSTPAGQPTAITRLHMQLHLHDLQQNASDLRNQLQQLKKLQLQNQETVKTMLRRTETEISVRVTDTMRKHEDPLQRQRSLVEEERLRYLNEEELITQQLNDLEKSVEKIQKDLAHNHRLIPVQELEEKAVVLKQLGETLTDLKAQFPSLQSKMRVVLRVEVEAVKFLKEEPNRLDGLLKRCKTVTDTLAQIRRQVDEGVWTPPNTLSQSPKKMAPETDFSKGLELEMPTSPPVSLHHLTAATETLGMPSFGHSPPQTQTHPSKSNNPSRAPEMVPAKTQTGPETPSKKSADKAVSVEAAERDWEEKRAALTQYSAKDINRLLEETQAELMKAIPDLDFAAKHKQATGSSSAASTPEHKPSKPQHAQKSAGKADPNGRRGSDELTVPRYRTEKPSKSPPPPPPRRSFPSSHGLTTTRSGEVIVTSKKEPGFMKKAESEELETQKPQVKLRRTVSEVVRPASTPPIIASAIKDDDDEDRIIAELEVFQRSSASPFIPKLGYDPLTAAASPGHAAMWPNGAEGWKEPVAPAPPGSRAFSLPQIVLTECESAPPSPESDPEVPVATGCSEHGDPAGSGAAGGELAPEAGGRCHVSAGTPRKSPSTPGGLPASAPQPQIAPSQGRERAPGETHGFPPADSKVPSPPARGASQPMGAEGEDTAPSPAGRQEGSSQPAPRGPVAEQPPRGQAADRGAEDTVLVPGAGTQGSGAVPSDAEPRGGGRQSTREASVPPGRSDGVCKRRDHRDGSPVPKARRPPGCDHIQGREWCQAGHPRGQVAASPGSQRCAASPGQDSVGLAAGAGGGEEDAGGKAAEGLCCPAPGGRSEGDVPPLHSMSPRSKEIYEGTYQRLDSLEETIRELEMTISEISSHPAAGLMFPKGLLGQAAPDGSEEMKARAGHLQHSGGDGGTALDLSQPKGDAPESSPPSQTKPPLLPKPQLPLSSPQSGGVSIPAMKMVNPASRLKQSQQGSPDKSKHIKQRMEYMRIQGQQQAARPSKEASETSPAVSEKPASGRTSIPVLTSFGARNSSISF
SIO_010081: SRCIN1
subclass of: SO_0000673
so part of: SRCIN1
location: complement(join(765629..765754,768173..768310,770498..771754,772928..773044,773393..773545,773624..773778,773916..774165,774482..774794,775679..775826,776706..776836,777078..777253,777408..777586,777914..777957,778069..778161,778525..779354,779757..779850,780378..780576,780693..780885,790946..790969,801376..801636))
location: region:765629-801636:-1
so has part: feature:801376-801636:-1:exon
so has part: feature:790946-790969:-1:exon
so has part: feature:780693-780885:-1:exon
so has part: feature:780378-780576:-1:exon
so has part: feature:779757-779850:-1:exon
so has part: feature:778525-779354:-1:exon
so has part: feature:778069-778161:-1:exon
so has part: feature:777914-777957:-1:exon
so has part: feature:777408-777586:-1:exon
so has part: feature:777078-777253:-1:exon
so has part: feature:776706-776836:-1:exon
so has part: feature:775679-775826:-1:exon
so has part: feature:774482-774794:-1:exon
so has part: feature:773916-774165:-1:exon
so has part: feature:773624-773778:-1:exon
so has part: feature:773393-773545:-1:exon
so has part: feature:772928-773044:-1:exon
so has part: feature:770498-771754:-1:exon
so has part: feature:768173-768310:-1:exon
so has part: feature:765629-765754:-1:exon

XP_038024545.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:801376-801636:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:790946-790969:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:780693-780885:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:780378-780576:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:779757-779850:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:778525-779354:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:778069-778161:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:777914-777957:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:777408-777586:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:777078-777253:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:776706-776836:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:775679-775826:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:774482-774794:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:773916-774165:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:773624-773778:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:773393-773545:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:772928-773044:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:770498-771754:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:768173-768310:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:765629-765754:-1:exon

SRCIN1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8839
gene: SRCIN1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: SRC kinase signaling inhibitor 1 isoform X7
translation: MSEAELPLGFNRMNRFRQSLPLSRSTSQTKLRSPGVLFLQFGDETRRVHITHEISSMDTLHALIVHMFPQKLTMGMLKSPNTAILIKDESRNVFYELEDVRDIQDRSIIKIYRKEPLYASFPASHITNGDLRREMVYTSRESSPTRRLNNMSPASHLASGSPPPVLQSSSPSRSRMSYSGGRPPSYAGSPVHHGERLSNLPPAPGVSPSPSAILERRDVKPDEDLAGKNMVLVKNEGLYADPYGMVHEGRLSITSTQSLAGMGDPFGYSGGLYKRGSVRSLSTYSAAALQTELEDGLYKPNAQIYSDTYGPGLGFRMPPSSPQKMSDGRLVDVQPGQSPHSPYSGPPSRSSPVRQSFRKDSCSSVFMDSPVSKPRNPSASGPPELFPGPGDRPLSGFSSPVPAKDTETRERMEAMEKQIASLTGLVQSALLRGSEAETPSEKTEATNGGTPPSASTSRSGMGTPVPAPPPPSATSTPAGQPTAITRLHMQLHLHDLQQNASDLRNQLQQLKKLQLQNQETVKTMLRRTETEISVRVTDTMRKHEDPLQRQRSLVEEERLRYLNEEELITQQLNDLEKSVEKIQKDLAHNHRLIPVQELEEKAVVLKQLGETLTDLKAQFPSLQSKMRVVLRVEVEAVKFLKEEPNRLDGLLKRCKTVTDTLAQIRRQVDEGVWTPPNTLSQSPKKMAPETDFSKGLELEMPTSPPVSLHHLTAATETLGMPSFGHSPPQTQTHPSKSNNPSRAPEMVPAKTQTGPETPSKKSADKAVSVEAAERDWEEKRAALTQYSAKDINRLLEETQAELMKAIPDLDFAAKHKQATGSSSAASTPEHKPSKPQHAQKSAGKADPNGRRGSDELTVPRYRTEKPSKSPPPPPPRRSFPSSHGLTTTRSGEVIVTSKKEPGFMKKAESEELETQKPQVKLRRTVSEVVRPASTPPIIASAIKDDDDEDRIIAELEVFQRSSASPFIPKLGYDPLTAAASPGHAAMWPNGAEGWKEPVAPAPPGSRAFSLPQIVLTECESAPPSPESDPEVPVATGCSEHGDPAGSGAAGGELAPEAGGRCHVSAGTPRKSPSTPGGLPASAPQPQIAPSQGRERAPGETHGFPPADSKVPSPPARGASQPMGAEGEDTAPSPAGRQEGSSQPAPRGPVAEQPPRGQAADRGAEDTVLVPGAGTQGSGAVPSDAEPRGGGRQSTREASVPPGRSDGVCKRRDHRDGSPVPKARRPPGCDHIQGREWCQAGHPRGQVAASPGSQRCAASPGQDSVGLAAGAGGGEEDAGGKAAEGLCCPAPGGRSEGDVPPLHSMSPRSKEIYEGTYQRLDSLEETIRELEMTISEISSHPAAGLMFPKGLLGQAAPDGSEEMKARAGHLQHSGGDGGTALDLSQPKGDAPESSPPSQTKPPLLPKPQLPLSSPQSGGVSIPAMKMVNPASRLKQSQQGSPDKSKHIKQRMEYMRIQGQQQAARPSKEASETSPAVSEKPASGRTSIPVLTSFGARNSSISF
SIO_010081: SRCIN1
subclass of: SO_0000673
so part of: SRCIN1
location: complement(join(765629..765754,768173..768310,770498..771754,772928..773044,773393..773545,773624..773778,773916..774165,774482..774794,775679..775826,776706..776836,777078..777253,777408..777586,777914..777957,778069..778161,778525..779354,779757..779850,780378..780576,780693..780795))
location: region:765629-780795:-1
so has part: feature:780693-780795:-1:exon
so has part: feature:780378-780576:-1:exon
so has part: feature:779757-779850:-1:exon
so has part: feature:778525-779354:-1:exon
so has part: feature:778069-778161:-1:exon
so has part: feature:777914-777957:-1:exon
so has part: feature:777408-777586:-1:exon
so has part: feature:777078-777253:-1:exon
so has part: feature:776706-776836:-1:exon
so has part: feature:775679-775826:-1:exon
so has part: feature:774482-774794:-1:exon
so has part: feature:773916-774165:-1:exon
so has part: feature:773624-773778:-1:exon
so has part: feature:773393-773545:-1:exon
so has part: feature:772928-773044:-1:exon
so has part: feature:770498-771754:-1:exon
so has part: feature:768173-768310:-1:exon
so has part: feature:765629-765754:-1:exon

XP_038024546.1
type: Protein
SIO_000068: ncbiprotein

position:780795:-1
position: 780795
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:780693-780795:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:780378-780576:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:779757-779850:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:778525-779354:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:778069-778161:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:777914-777957:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:777408-777586:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:777078-777253:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:776706-776836:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:775679-775826:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:774482-774794:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:773916-774165:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:773624-773778:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:773393-773545:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:772928-773044:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:770498-771754:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:768173-768310:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:765629-765754:-1:exon

SRCIN1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8839
gene: SRCIN1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: SRC kinase signaling inhibitor 1 isoform X7
translation: MSEAELPLGFNRMNRFRQSLPLSRSTSQTKLRSPGVLFLQFGDETRRVHITHEISSMDTLHALIVHMFPQKLTMGMLKSPNTAILIKDESRNVFYELEDVRDIQDRSIIKIYRKEPLYASFPASHITNGDLRREMVYTSRESSPTRRLNNMSPASHLASGSPPPVLQSSSPSRSRMSYSGGRPPSYAGSPVHHGERLSNLPPAPGVSPSPSAILERRDVKPDEDLAGKNMVLVKNEGLYADPYGMVHEGRLSITSTQSLAGMGDPFGYSGGLYKRGSVRSLSTYSAAALQTELEDGLYKPNAQIYSDTYGPGLGFRMPPSSPQKMSDGRLVDVQPGQSPHSPYSGPPSRSSPVRQSFRKDSCSSVFMDSPVSKPRNPSASGPPELFPGPGDRPLSGFSSPVPAKDTETRERMEAMEKQIASLTGLVQSALLRGSEAETPSEKTEATNGGTPPSASTSRSGMGTPVPAPPPPSATSTPAGQPTAITRLHMQLHLHDLQQNASDLRNQLQQLKKLQLQNQETVKTMLRRTETEISVRVTDTMRKHEDPLQRQRSLVEEERLRYLNEEELITQQLNDLEKSVEKIQKDLAHNHRLIPVQELEEKAVVLKQLGETLTDLKAQFPSLQSKMRVVLRVEVEAVKFLKEEPNRLDGLLKRCKTVTDTLAQIRRQVDEGVWTPPNTLSQSPKKMAPETDFSKGLELEMPTSPPVSLHHLTAATETLGMPSFGHSPPQTQTHPSKSNNPSRAPEMVPAKTQTGPETPSKKSADKAVSVEAAERDWEEKRAALTQYSAKDINRLLEETQAELMKAIPDLDFAAKHKQATGSSSAASTPEHKPSKPQHAQKSAGKADPNGRRGSDELTVPRYRTEKPSKSPPPPPPRRSFPSSHGLTTTRSGEVIVTSKKEPGFMKKAESEELETQKPQVKLRRTVSEVVRPASTPPIIASAIKDDDDEDRIIAELEVFQRSSASPFIPKLGYDPLTAAASPGHAAMWPNGAEGWKEPVAPAPPGSRAFSLPQIVLTECESAPPSPESDPEVPVATGCSEHGDPAGSGAAGGELAPEAGGRCHVSAGTPRKSPSTPGGLPASAPQPQIAPSQGRERAPGETHGFPPADSKVPSPPARGASQPMGAEGEDTAPSPAGRQEGSSQPAPRGPVAEQPPRGQAADRGAEDTVLVPGAGTQGSGAVPSDAEPRGGGRQSTREASVPPGRSDGVCKRRDHRDGSPVPKARRPPGCDHIQGREWCQAGHPRGQVAASPGSQRCAASPGQDSVGLAAGAGGGEEDAGGKAAEGLCCPAPGGRSEGDVPPLHSMSPRSKEIYEGTYQRLDSLEETIRELEMTISEISSHPAAGLMFPKGLLGQAAPDGSEEMKARAGHLQHSGGDGGTALDLSQPKGDAPESSPPSQTKPPLLPKPQLPLSSPQSGGVSIPAMKMVNPASRLKQSQQGSPDKSKHIKQRMEYMRIQGQQQAARPSKEASETSPAVSEKPASGRTSIPVLTSFGARNSSISF
SIO_010081: SRCIN1
subclass of: SO_0000673
so part of: SRCIN1
location: complement(join(765629..765754,768173..768310,770498..771754,772928..773044,773393..773545,773624..773778,773916..774165,774482..774794,775679..775826,776706..776836,777078..777253,777408..777586,777914..777957,778069..778161,778525..779354,779757..779850,780378..780576,780693..780795))
location: region:765629-780795:-1
so has part: feature:780693-780795:-1:exon
so has part: feature:780378-780576:-1:exon
so has part: feature:779757-779850:-1:exon
so has part: feature:778525-779354:-1:exon
so has part: feature:778069-778161:-1:exon
so has part: feature:777914-777957:-1:exon
so has part: feature:777408-777586:-1:exon
so has part: feature:777078-777253:-1:exon
so has part: feature:776706-776836:-1:exon
so has part: feature:775679-775826:-1:exon
so has part: feature:774482-774794:-1:exon
so has part: feature:773916-774165:-1:exon
so has part: feature:773624-773778:-1:exon
so has part: feature:773393-773545:-1:exon
so has part: feature:772928-773044:-1:exon
so has part: feature:770498-771754:-1:exon
so has part: feature:768173-768310:-1:exon
so has part: feature:765629-765754:-1:exon

XP_038024547.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:780693-780795:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:780378-780576:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:779757-779850:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:778525-779354:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:778069-778161:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:777914-777957:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:777408-777586:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:777078-777253:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:776706-776836:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:775679-775826:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:774482-774794:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:773916-774165:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:773624-773778:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:773393-773545:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:772928-773044:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:770498-771754:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:768173-768310:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:765629-765754:-1:exon

SRCIN1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8839
gene: SRCIN1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: SRC kinase signaling inhibitor 1 isoform X5
translation: MRFWSRAPSSLLVPLGCLGATMLPRWAKHPFGASPRAAPRLREQERPSEPGDCRLTPLLVDPDRTSTHMISADDAEYPREYRTLGNGTRRFSNVGLVHTSERRHTVIAAQSLEALTGLQKSEMERKRDAFMDHLKNKYPQHALALRGQQERMRDQQPNYWSFKTRSSRHSQGSQPGLADQAKLSFASAESLETMSEAELPLGFNRMNRFRQSLPLSRSTSQTKLRSPGVLFLQFGDETRRVHITHEISSMDTLHALIVHMFPQKLTMGMLKSPNTAILIKDESRNVFYELEDVRDIQDRSIIKIYRKEPLYASFPASHITNGDLRREMVYTSRESSPTRRLNNMSPASHLASGSPPPVLQSSSPSRSRMSYSGGRPPSYAGSPVHHGERLSNLPPAPGVSPSPSAILERRDVKPDEDLAGKNMVLVKNEGLYADPYGMVHEGRLSITSTQSLAGMGDPFGYSGGLYKRGSVRSLSTYSAAALQTELEDGLYKPNAQIYSDTYGPGLGFRMPPSSPQKMSDGRLVDVQPGQSPHSPYSGPPSRSSPVRQSFRKDSCSSVFMDSPVSKPRNPSASGPPELFPGPGDRPLSGFSSPVPAKDTETRERMEAMEKQIASLTGLVQSALLRGSEAETPSEKTEATNGGTPPSASTSRSGMGTPVPAPPPPSATSTPAGQPTAITRLHMQLHLHDLQQNASDLRNQLQQLKKLQLQNQETVKTMLRRTETEISVRVTDTMRKHEDPLQRQRSLVEEERLRYLNEEELITQQLNDLEKSVEKIQKDLAHNHRLIPVQELEEKAVVLKQLGETLTDLKAQFPSLQSKMRVVLRVEVEAVKFLKEEPNRLDGLLKRCKTVTDTLAQIRRQVDEGVWTPPNTLSQSPKKMAPETDFSKGLELEMPTSPPVSLHHLTAATETLGMPSFGHSPPQTQTHPSKSNNPSRAPEMVPAKTQTGPETPSKKSADKAVSVEAAERDWEEKRAALTQYSAKDINRLLEETQAELMKAIPDLDFAAKHKQATGSSSAASTPEHKPSKPQHAQKSAGKADPNGRRGSDELTVPRYRTEKPSKSPPPPPPRRSFPSSHGLTTTRSGEVIVTSKKEPGFMKKAESEELETQKPQVKLRRTVSEVVRPASTPPIIASAIKDDDDEDRIIAELEVFQRSSASPFIPKLGYDPLTAAASPGHAAMWPNGAEGWKEPVAPAPPGSRAFSLPQIVLTECESAPPSPESDPEVPVATGCSEHGDPAGSGAAGGELAPEAGGRCHVSAGTPRKSPSTPGGLPASAPQPQIAPSQGRERAPGETHGFPPADSKVPSPPARGASQPMGAEGEDTAPSPAGRQEGSSQPAPRGPVAEQPPRGQAADRGAEDTVLVPGAGTQGSGAVPSDAEPRGGGRQSTREASVPPGRSDGVCKRRDHRDGSPVPKARRPPGCDHIQGREWCQAGHPRGQVAASPGSQRCAASPGQDSVGLAAGAGGGEEDAGGKAAEGLCCPAPGGRSEGDVPPLHSMSPRSKEIYEGTYQRLDSLEETIRELEMTISEISSHPAAGLMFPKGLLGQAAPDGSEEMKARAGHLQHSGGDGGTALDLSQPKGDAPESSPPSQTKPPLLPKPQLPLSSPQSGGVSIPAMKMVNPASRLKQSQQGSPDKSKHIKQRMEYMRIQGQQQ
SIO_010081: SRCIN1
subclass of: SO_0000673
so part of: SRCIN1
location: complement(join(765991..765993,768173..768310,770498..771754,772928..773044,773393..773545,773624..773778,773916..774165,774482..774794,775679..775826,776706..776836,777078..777253,777408..777586,777914..777957,778069..778161,778525..779354,779757..779850,780378..780576,780693..780885,790946..790969,801376..801659,810804..810979,811200..811204))
location: region:765991-811204:-1
so has part: feature:811200-811204:-1:exon
so has part: feature:810804-810979:-1:exon
so has part: feature:801376-801659:-1:exon
so has part: feature:790946-790969:-1:exon
so has part: feature:780693-780885:-1:exon
so has part: feature:780378-780576:-1:exon
so has part: feature:779757-779850:-1:exon
so has part: feature:778525-779354:-1:exon
so has part: feature:778069-778161:-1:exon
so has part: feature:777914-777957:-1:exon
so has part: feature:777408-777586:-1:exon
so has part: feature:777078-777253:-1:exon
so has part: feature:776706-776836:-1:exon
so has part: feature:775679-775826:-1:exon
so has part: feature:774482-774794:-1:exon
so has part: feature:773916-774165:-1:exon
so has part: feature:773624-773778:-1:exon
so has part: feature:773393-773545:-1:exon
so has part: feature:772928-773044:-1:exon
so has part: feature:770498-771754:-1:exon
so has part: feature:768173-768310:-1:exon
so has part: feature:765991-765993:-1:exon

XP_038024543.1
type: Protein
SIO_000068: ncbiprotein

position:765991:-1
position: 765991
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:811200-811204:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:810804-810979:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:801376-801659:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:790946-790969:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:780693-780885:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:780378-780576:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:779757-779850:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:778525-779354:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:778069-778161:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:777914-777957:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:777408-777586:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:777078-777253:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:776706-776836:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:775679-775826:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:774482-774794:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:773916-774165:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:773624-773778:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:773393-773545:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:772928-773044:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:770498-771754:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:768173-768310:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:765991-765993:-1:exon

LOC113840004
type: Gene
subclass of: SO_0000704
RO_0002162: 8839
gene: LOC113840004
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(835143..842770)
location: region:835143-842770:-1
so has part: feature:835143-842770:-1:exon
subclass of: SO_0000010

113840004
type: Gene
SIO_000068: ncbigene

position:835143:-1
position: 835143
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:842770:-1
position: 842770
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:835143-842770:-1:exon

LOC113840004
type: Miscellaneous RNA
subclass of: SO_0000673
RO_0002162: 8839
gene: LOC113840004
product: uncharacterized LOC113840004, transcript variant X6
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XR_005261195.1
SIO_010081: LOC113840004
so part of: LOC113840004
location: complement(join(835143..836031,841130..841219,842064..842158,842505..842719))
location: region:835143-842719:-1
so has part: feature:842505-842719:-1:exon
so has part: feature:842064-842158:-1:exon
so has part: feature:841130-841219:-1:exon
so has part: feature:835143-836031:-1:exon

position:842719:-1
position: 842719
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:842505-842719:-1:exon

position:842505:-1
position: 842505
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:842064-842158:-1:exon

position:842064:-1
position: 842064
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:842158:-1
position: 842158
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:841130-841219:-1:exon

position:841130:-1
position: 841130
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:841219:-1
position: 841219
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:835143-836031:-1:exon

position:836031:-1
position: 836031
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC113840004
type: Miscellaneous RNA
subclass of: SO_0000673
RO_0002162: 8839
gene: LOC113840004
product: uncharacterized LOC113840004, transcript variant X5
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
transcript id: XR_005261194.1
SIO_010081: LOC113840004
so part of: LOC113840004
location: complement(join(836986..838825,841130..841219,842064..842158,842726..842761))
location: region:836986-842761:-1
so has part: feature:842726-842761:-1:exon
so has part: feature:842064-842158:-1:exon
so has part: feature:841130-841219:-1:exon
so has part: feature:836986-838825:-1:exon

position:836986:-1
position: 836986
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:842761:-1
position: 842761
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:842726-842761:-1:exon

position:842726:-1
position: 842726
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:842064-842158:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:841130-841219:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:836986-838825:-1:exon

position:838825:-1
position: 838825
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC113840004
type: Miscellaneous RNA
subclass of: SO_0000673
RO_0002162: 8839
gene: LOC113840004
product: uncharacterized LOC113840004, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 6 samples with support for all annotated introns
transcript id: XR_005261192.1
SIO_010081: LOC113840004
so part of: LOC113840004
location: complement(join(836986..838825,841130..841219,842064..842158,842505..842719))
location: region:836986-842719:-1
so has part: feature:842505-842719:-1:exon
so has part: feature:842064-842158:-1:exon
so has part: feature:841130-841219:-1:exon
so has part: feature:836986-838825:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:842505-842719:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:842064-842158:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:841130-841219:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:836986-838825:-1:exon

LOC113840004
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8839
gene: LOC113840004
product: uncharacterized LOC113840004, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
transcript id: XM_038168623.1
SIO_010081: LOC113840004
subclass of: SO_0000673
so part of: LOC113840004
location: complement(join(840442..840897,841130..841219,842064..842158,842505..842719))
location: region:840442-842719:-1
so has part: feature:842505-842719:-1:exon
so has part: feature:842064-842158:-1:exon
so has part: feature:841130-841219:-1:exon
so has part: feature:840442-840897:-1:exon

position:840442:-1
position: 840442
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:842505-842719:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:842064-842158:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:841130-841219:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:840442-840897:-1:exon

position:840897:-1
position: 840897
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC113840004
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8839
gene: LOC113840004
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: uncharacterized protein LOC113840004
translation: MVTTPAPCSWLCFEIPEVPGSVPAGGCCQPAARAAVHGLVPALPGTCSWTTGRWLFLKGTQPLVTPLPWNRRKGELEGTLKADVKNRLFVPSADALSVFEDFHYVLPWPPCAQTRGSRYRQPVLRDRLSSDSGVRQSSRAGMRFFMVLVPVWVSRGGPERLGEVVPSCSTSGECSLQSCSLWGWAVPQDVPHPSMPRLRSCWHRDLSRAEVSPRG
SIO_010081: LOC113840004
subclass of: SO_0000673
so part of: LOC113840004
location: complement(join(840494..840897,841130..841219,842064..842158,842505..842563))
location: region:840494-842563:-1
so has part: feature:842505-842563:-1:exon
so has part: feature:842064-842158:-1:exon
so has part: feature:841130-841219:-1:exon
so has part: feature:840494-840897:-1:exon

XP_038024551.1
type: Protein
SIO_000068: ncbiprotein

position:840494:-1
position: 840494
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:842563:-1
position: 842563
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:842505-842563:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:842064-842158:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:841130-841219:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:840494-840897:-1:exon

LOC113840004
type: Miscellaneous RNA
subclass of: SO_0000673
RO_0002162: 8839
gene: LOC113840004
product: uncharacterized LOC113840004, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 9 samples with support for all annotated introns
transcript id: XR_005261193.1
SIO_010081: LOC113840004
so part of: LOC113840004
location: complement(join(841482..841945,842064..842158,842726..842770))
location: region:841482-842770:-1
so has part: feature:842726-842770:-1:exon
so has part: feature:842064-842158:-1:exon
so has part: feature:841482-841945:-1:exon

position:841482:-1
position: 841482
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:842726-842770:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:842064-842158:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:841482-841945:-1:exon

position:841945:-1
position: 841945
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC113840004
type: Miscellaneous RNA
subclass of: SO_0000673
RO_0002162: 8839
gene: LOC113840004
product: uncharacterized LOC113840004, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 11 samples with support for all annotated introns
transcript id: XR_003492690.2
SIO_010081: LOC113840004
so part of: LOC113840004
location: complement(join(841484..841945,842064..842158,842505..842719))
location: region:841484-842719:-1
so has part: feature:842505-842719:-1:exon
so has part: feature:842064-842158:-1:exon
so has part: feature:841484-841945:-1:exon

position:841484:-1
position: 841484
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:842505-842719:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:842064-842158:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:841484-841945:-1:exon

LOC110353394
type: Gene
subclass of: SO_0000704
RO_0002162: 8839
gene: LOC110353394
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(849201..859542)
location: region:849201-859542:-1
so has part: feature:849201-859542:-1:exon
subclass of: SO_0000010

110353394
type: Gene
SIO_000068: ncbigene

position:849201:-1
position: 849201
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:859542:-1
position: 859542
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:849201-859542:-1:exon

LOC110353394
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8839
gene: LOC110353394
product: elongin BC and polycomb repressive complex 2 associated protein, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 20 samples with support for all annotated introns
transcript id: XM_038168622.1
SIO_010081: LOC110353394
subclass of: SO_0000673
so part of: LOC110353394
location: complement(join(849201..850470,856953..859542))
location: region:849201-859542:-1
so has part: feature:856953-859542:-1:exon
so has part: feature:849201-850470:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:856953-859542:-1:exon

position:856953:-1
position: 856953
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:849201-850470:-1:exon

position:850470:-1
position: 850470
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC110353394
type: Miscellaneous RNA
subclass of: SO_0000673
RO_0002162: 8839
gene: LOC110353394
product: elongin BC and polycomb repressive complex 2 associated protein, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 12 samples with support for all annotated introns
transcript id: XR_005261191.1
SIO_010081: LOC110353394
so part of: LOC110353394
location: complement(join(849352..849397,850294..850470,850606..859542))
location: region:849352-859542:-1
so has part: feature:850606-859542:-1:exon
so has part: feature:850294-850470:-1:exon
so has part: feature:849352-849397:-1:exon

position:849352:-1
position: 849352
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:850606-859542:-1:exon

position:850606:-1
position: 850606
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:850294-850470:-1:exon

position:850294:-1
position: 850294
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:849352-849397:-1:exon

position:849397:-1
position: 849397
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC110353394
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8839
gene: LOC110353394
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: elongin BC and Polycomb repressive complex 2-associated protein
translation: MFLTCEGTFGIVPATMDYNGEARPGDFHAGYQEIEGINLGYLQINGTQMFALAQVLSDLFKDIPRTTISKKMETLKIKSRRCDLKELRTLKAIHSVPTRAVKCSLISKADLEALCTSCKSLSPRRRKRKRKSKRREQLLLPDPGELFACPRPQLLPPCRAGACCAPPAPGRPKLPPALAKARSAPAALLPQPFHHRPFPGLERAPRGRRGCGLPERAGLFGGVLGAYPRDLALLHPAAAHPAAHPAALAEPGRRKRGPCCAKGLFPAEKGPGGARKGRSSAFPGSKRQGTSAGYSSDSDSSLDFGGSSPATSSDSSEEEEEEEEEEEEEGDTSCSSEEGSSSESESSSLCSGDSVQSTRYRQAALPRFQPQPPREPLGDERPAEPPPGSGKALRPDPDLLFLSQQLWARTLRASTSESLSPAPALGSGAQPQPELYAKQEASPSSSSSSSSSSSSSSSSSSSSPPPSPSSTPGGDPQQKEGGFGDAEPCAKGKDLHKDASNNRASLGPSDQAERQSEALAGRAASQEPAPGSAPQPPAPELAGSLGPAPPGEAGEPRREHFDRLIRQSKLWCYAKGFNVDGKSLRHGGRTEPCKAAELKSPGSKRAESPSTLSNKALKGNGSERNAKRRRLARGAEAERQQSSSKGRPQKTQRRNAKKGNTHCKRLGSAGPTPPRNSFSLMGNFPCIPSLVVGEDGDLCPASSLGVKNSWALSKTHPLWSWHLGGNAIPVPPSLKFRGYSLEDL
SIO_010081: LOC110353394
subclass of: SO_0000673
so part of: LOC110353394
location: complement(856978..859212)
location: region:856978-859212:-1
so has part: feature:856978-859212:-1:exon

XP_038024550.1
type: Protein
SIO_000068: ncbiprotein

position:856978:-1
position: 856978
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:859212:-1
position: 859212
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:856978-859212:-1:exon

LOC119714046
type: Gene
subclass of: SO_0000704
RO_0002162: 8839
gene: LOC119714046
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 858947..865074
location: region:858947-865074:1
so has part: feature:858947-865074:1:exon
subclass of: SO_0000011

119714046
type: Gene
SIO_000068: ncbigene

position:858947:1
position: 858947
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:865074:1
position: 865074
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:858947-865074:1:exon

LOC119714046
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 8839
nc RNA class: lncRNA
gene: LOC119714046
product: uncharacterized LOC119714046
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 58 samples with support for all annotated introns
transcript id: XR_005261196.1
SIO_010081: LOC119714046
subclass of: SO_0000673
so part of: LOC119714046
location: join(858947..859085,864247..865074)
location: region:858947-865074:1
so has part: feature:858947-859085:1:exon
so has part: feature:864247-865074:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:858947-859085:1:exon

position:859085:1
position: 859085
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:864247-865074:1:exon

position:864247:1
position: 864247
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

MLLT6
type: Gene
subclass of: SO_0000704
RO_0002162: 8839
gene: MLLT6
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 877574..921489
location: region:877574-921489:1
so has part: feature:877574-921489:1:exon
subclass of: SO_0000010

101795350
type: Gene
SIO_000068: ncbigene

position:877574:1
position: 877574
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:921489:1
position: 921489
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:877574-921489:1:exon

MLLT6
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8839
gene: MLLT6
product: MLLT6, PHD finger containing, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, 6 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 110 samples with support for all annotated introns
transcript id: XM_038168713.1
SIO_010081: MLLT6
subclass of: SO_0000673
so part of: MLLT6
location: join(877574..877760,881237..881316,886336..886390,887967..888076,888533..888636,889346..889439,890648..890755,899126..899224,905910..906084,906846..907445,908788..908972,909718..909835,913053..913119,913423..913565,913848..914036,914230..914318,914719..915074,915207..915315,916769..917149,917994..921489)
location: region:877574-921489:1
so has part: feature:877574-877760:1:exon
so has part: feature:881237-881316:1:exon
so has part: feature:886336-886390:1:exon
so has part: feature:887967-888076:1:exon
so has part: feature:888533-888636:1:exon
so has part: feature:889346-889439:1:exon
so has part: feature:890648-890755:1:exon
so has part: feature:899126-899224:1:exon
so has part: feature:905910-906084:1:exon
so has part: feature:906846-907445:1:exon
so has part: feature:908788-908972:1:exon
so has part: feature:909718-909835:1:exon
so has part: feature:913053-913119:1:exon
so has part: feature:913423-913565:1:exon
so has part: feature:913848-914036:1:exon
so has part: feature:914230-914318:1:exon
so has part: feature:914719-915074:1:exon
so has part: feature:915207-915315:1:exon
so has part: feature:916769-917149:1:exon
so has part: feature:917994-921489:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:877574-877760:1:exon

position:877760:1
position: 877760
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:881237-881316:1:exon

position:881237:1
position: 881237
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:881316:1
position: 881316
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:886336-886390:1:exon

position:886336:1
position: 886336
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:886390:1
position: 886390
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:887967-888076:1:exon

position:887967:1
position: 887967
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:888076:1
position: 888076
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:888533-888636:1:exon

position:888533:1
position: 888533
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:888636:1
position: 888636
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:889346-889439:1:exon

position:889346:1
position: 889346
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:889439:1
position: 889439
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:890648-890755:1:exon

position:890648:1
position: 890648
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:890755:1
position: 890755
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:899126-899224:1:exon

position:899126:1
position: 899126
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:899224:1
position: 899224
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:905910-906084:1:exon

position:905910:1
position: 905910
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:906084:1
position: 906084
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:906846-907445:1:exon

position:906846:1
position: 906846
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:907445:1
position: 907445
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:908788-908972:1:exon

position:908788:1
position: 908788
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:908972:1
position: 908972
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:909718-909835:1:exon

position:909718:1
position: 909718
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:909835:1
position: 909835
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:913053-913119:1:exon

position:913053:1
position: 913053
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:913119:1
position: 913119
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:913423-913565:1:exon

position:913423:1
position: 913423
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:913565:1
position: 913565
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:913848-914036:1:exon

position:913848:1
position: 913848
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:914036:1
position: 914036
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:914230-914318:1:exon

position:914230:1
position: 914230
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:914318:1
position: 914318
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:914719-915074:1:exon

position:914719:1
position: 914719
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:915074:1
position: 915074
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:915207-915315:1:exon

position:915207:1
position: 915207
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:915315:1
position: 915315
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:916769-917149:1:exon

position:916769:1
position: 916769
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:917149:1
position: 917149
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:917994-921489:1:exon

position:917994:1
position: 917994
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

MLLT6
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8839
gene: MLLT6
product: MLLT6, PHD finger containing, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, 6 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 111 samples with support for all annotated introns
transcript id: XM_038168714.1
SIO_010081: MLLT6
subclass of: SO_0000673
so part of: MLLT6
location: join(877574..877760,881237..881316,886336..886390,887967..888076,888533..888636,889346..889439,890651..890755,899126..899224,905910..906084,906846..907445,908788..908972,909718..909835,913053..913119,913423..913565,913848..914036,914230..914318,914719..915074,915207..915315,916769..917149,917994..921489)
location: region:877574-921489:1
so has part: feature:877574-877760:1:exon
so has part: feature:881237-881316:1:exon
so has part: feature:886336-886390:1:exon
so has part: feature:887967-888076:1:exon
so has part: feature:888533-888636:1:exon
so has part: feature:889346-889439:1:exon
so has part: feature:890651-890755:1:exon
so has part: feature:899126-899224:1:exon
so has part: feature:905910-906084:1:exon
so has part: feature:906846-907445:1:exon
so has part: feature:908788-908972:1:exon
so has part: feature:909718-909835:1:exon
so has part: feature:913053-913119:1:exon
so has part: feature:913423-913565:1:exon
so has part: feature:913848-914036:1:exon
so has part: feature:914230-914318:1:exon
so has part: feature:914719-915074:1:exon
so has part: feature:915207-915315:1:exon
so has part: feature:916769-917149:1:exon
so has part: feature:917994-921489:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:877574-877760:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:881237-881316:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:886336-886390:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:887967-888076:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:888533-888636:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:889346-889439:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:890651-890755:1:exon

position:890651:1
position: 890651
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:899126-899224:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:905910-906084:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:906846-907445:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:908788-908972:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:909718-909835:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:913053-913119:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:913423-913565:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:913848-914036:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:914230-914318:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:914719-915074:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:915207-915315:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:916769-917149:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:917994-921489:1:exon

MLLT6
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8839
gene: MLLT6
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protein AF-17 isoform X1
translation: MKEMVGGCCVCSDERGWAENPLVYCDGHGCNVAVHQACYGIVQVPTGPWFCRKCESQERAARVRCELCPHKDGALKRTDNGGWAHVVCALYIPEVQFANVLTMEPIVLQYVPHDRFNKTCYICEEQGRESKAASGACMACNRHGCRQAFHVTCAQMAGLLCEEEVLEVDNVKYCGYCKYHFNKMKTSRHSGGSSFIAGRRSRSTSPAQEKHVSHHERPKKSRKDKERPKQKHKKRPESPTSLTPASVPVAAEKGSTSHHEGSKETSEVGRSEVKGKKSSSHGSSHKGKKTGSGKSSAGFSSASSSGTFQPAGTSCSSLQCSQDFVTFPKLEQDDEKYRKPVSSSSSSHCSPLYEGQKGDIFEQKVIFSGFGSIMRFSTSAVSQQRGRDASPVDYKASNPVSGPSVGSSGAAGGSGSSSSHKRMPSLSMEEGEVLKEKKHKGSKKNKHGPGRPKGGKSKEILGAQLAGSTSTSSSPFSGGSLVSSSISNSSRPFSHTGNLPSLSMESPLLSSGIYTSNKDPISHGGGVLRAVCSTPLSSSLLAHQGTSSLPQLNRSPFASTIPASSSSSVSTTQVFSLAGSTFSLPSSHIFGSPLTSGLSINPLLNQSESSRAEPDLEDCSFGCRGTSPQESLSSMSPISSLPTLFDQTVSCSSSGQLENVPQATPNIEQLLEKQGNGEAGVNIVEMLKALHSLQKENQRLQEQIMTLTAKKERLQLLNVQLSVPFPVVTSSNGPGSQAQYILPANVCNNDSLSISKSPPCKNSFGIENSLSTSSEDPHSGCPSRSSSSLSFHSTPPPLPMLQQSPASLPLPGVQQVNGLARVAGSGLGGGTTASHSLSTVPMVDGLMGTLAGGQQMPINGILGNLNGAQATQPPSALTQASGPPTLQLSTSLSSVPSLSPLTEQQRHVLHQHEQQLQQLQQLLTSQPLNPEQQALVFQMMQQIQQKRELQRLQMTSSSQLSMSSLLAATSAPLLHSSTSALMTSAPQAPPSSSSLMASLSPQQLNPSNALLAPQATPPLSAPGNSLMASGTGIPPVLTAQTNPFLNLQADGNTPKGTSMNEKGAPLTQDKG
SIO_010081: MLLT6
subclass of: SO_0000673
so part of: MLLT6
location: join(877652..877760,881237..881316,886336..886390,887967..888076,888533..888636,889346..889439,890648..890755,899126..899224,905910..906084,906846..907445,908788..908972,909718..909835,913053..913119,913423..913565,913848..914036,914230..914318,914719..915074,915207..915315,916769..917149,917994..918038)
location: region:877652-918038:1
so has part: feature:877652-877760:1:exon
so has part: feature:881237-881316:1:exon
so has part: feature:886336-886390:1:exon
so has part: feature:887967-888076:1:exon
so has part: feature:888533-888636:1:exon
so has part: feature:889346-889439:1:exon
so has part: feature:890648-890755:1:exon
so has part: feature:899126-899224:1:exon
so has part: feature:905910-906084:1:exon
so has part: feature:906846-907445:1:exon
so has part: feature:908788-908972:1:exon
so has part: feature:909718-909835:1:exon
so has part: feature:913053-913119:1:exon
so has part: feature:913423-913565:1:exon
so has part: feature:913848-914036:1:exon
so has part: feature:914230-914318:1:exon
so has part: feature:914719-915074:1:exon
so has part: feature:915207-915315:1:exon
so has part: feature:916769-917149:1:exon
so has part: feature:917994-918038:1:exon

XP_038024641.1
type: Protein
SIO_000068: ncbiprotein

position:877652:1
position: 877652
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:918038:1
position: 918038
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:877652-877760:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:881237-881316:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:886336-886390:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:887967-888076:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:888533-888636:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:889346-889439:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:890648-890755:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:899126-899224:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:905910-906084:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:906846-907445:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:908788-908972:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:909718-909835:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:913053-913119:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:913423-913565:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:913848-914036:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:914230-914318:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:914719-915074:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:915207-915315:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:916769-917149:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:917994-918038:1:exon

MLLT6
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8839
gene: MLLT6
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protein AF-17 isoform X2
translation: MKEMVGGCCVCSDERGWAENPLVYCDGHGCNVAVHQACYGIVQVPTGPWFCRKCESQERAARVRCELCPHKDGALKRTDNGGWAHVVCALYIPEVQFANVLTMEPIVLQYVPHDRFNKTCYICEEQGRESKAASGACMACNRHGCRQAFHVTCAQMAGLLCEEEVLEVDNVKYCGYCKYHFNKMTSRHSGGSSFIAGRRSRSTSPAQEKHVSHHERPKKSRKDKERPKQKHKKRPESPTSLTPASVPVAAEKGSTSHHEGSKETSEVGRSEVKGKKSSSHGSSHKGKKTGSGKSSAGFSSASSSGTFQPAGTSCSSLQCSQDFVTFPKLEQDDEKYRKPVSSSSSSHCSPLYEGQKGDIFEQKVIFSGFGSIMRFSTSAVSQQRGRDASPVDYKASNPVSGPSVGSSGAAGGSGSSSSHKRMPSLSMEEGEVLKEKKHKGSKKNKHGPGRPKGGKSKEILGAQLAGSTSTSSSPFSGGSLVSSSISNSSRPFSHTGNLPSLSMESPLLSSGIYTSNKDPISHGGGVLRAVCSTPLSSSLLAHQGTSSLPQLNRSPFASTIPASSSSSVSTTQVFSLAGSTFSLPSSHIFGSPLTSGLSINPLLNQSESSRAEPDLEDCSFGCRGTSPQESLSSMSPISSLPTLFDQTVSCSSSGQLENVPQATPNIEQLLEKQGNGEAGVNIVEMLKALHSLQKENQRLQEQIMTLTAKKERLQLLNVQLSVPFPVVTSSNGPGSQAQYILPANVCNNDSLSISKSPPCKNSFGIENSLSTSSEDPHSGCPSRSSSSLSFHSTPPPLPMLQQSPASLPLPGVQQVNGLARVAGSGLGGGTTASHSLSTVPMVDGLMGTLAGGQQMPINGILGNLNGAQATQPPSALTQASGPPTLQLSTSLSSVPSLSPLTEQQRHVLHQHEQQLQQLQQLLTSQPLNPEQQALVFQMMQQIQQKRELQRLQMTSSSQLSMSSLLAATSAPLLHSSTSALMTSAPQAPPSSSSLMASLSPQQLNPSNALLAPQATPPLSAPGNSLMASGTGIPPVLTAQTNPFLNLQADGNTPKGTSMNEKGAPLTQDKG
SIO_010081: MLLT6
subclass of: SO_0000673
so part of: MLLT6
location: join(877652..877760,881237..881316,886336..886390,887967..888076,888533..888636,889346..889439,890651..890755,899126..899224,905910..906084,906846..907445,908788..908972,909718..909835,913053..913119,913423..913565,913848..914036,914230..914318,914719..915074,915207..915315,916769..917149,917994..918038)
location: region:877652-918038:1
so has part: feature:877652-877760:1:exon
so has part: feature:881237-881316:1:exon
so has part: feature:886336-886390:1:exon
so has part: feature:887967-888076:1:exon
so has part: feature:888533-888636:1:exon
so has part: feature:889346-889439:1:exon
so has part: feature:890651-890755:1:exon
so has part: feature:899126-899224:1:exon
so has part: feature:905910-906084:1:exon
so has part: feature:906846-907445:1:exon
so has part: feature:908788-908972:1:exon
so has part: feature:909718-909835:1:exon
so has part: feature:913053-913119:1:exon
so has part: feature:913423-913565:1:exon
so has part: feature:913848-914036:1:exon
so has part: feature:914230-914318:1:exon
so has part: feature:914719-915074:1:exon
so has part: feature:915207-915315:1:exon
so has part: feature:916769-917149:1:exon
so has part: feature:917994-918038:1:exon

XP_038024642.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:877652-877760:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:881237-881316:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:886336-886390:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:887967-888076:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:888533-888636:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:889346-889439:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:890651-890755:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:899126-899224:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:905910-906084:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:906846-907445:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:908788-908972:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:909718-909835:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:913053-913119:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:913423-913565:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:913848-914036:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:914230-914318:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:914719-915074:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:915207-915315:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:916769-917149:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:917994-918038:1:exon

MLLT6
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8839
gene: MLLT6
product: MLLT6, PHD finger containing, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 21 samples with support for all annotated introns
transcript id: XM_027445425.2
SIO_010081: MLLT6
subclass of: SO_0000673
so part of: MLLT6
location: join(879330..880733,881237..881316,886336..886390,887967..888076,888533..888636,889346..889439,890648..890755,899126..899224,905910..906084,906846..907445,908788..908972,909718..909835,913053..913119,913423..913565,913848..914036,914230..914318,914719..915074,915207..915315,916769..917149,917994..921489)
location: region:879330-921489:1
so has part: feature:879330-880733:1:exon
so has part: feature:881237-881316:1:exon
so has part: feature:886336-886390:1:exon
so has part: feature:887967-888076:1:exon
so has part: feature:888533-888636:1:exon
so has part: feature:889346-889439:1:exon
so has part: feature:890648-890755:1:exon
so has part: feature:899126-899224:1:exon
so has part: feature:905910-906084:1:exon
so has part: feature:906846-907445:1:exon
so has part: feature:908788-908972:1:exon
so has part: feature:909718-909835:1:exon
so has part: feature:913053-913119:1:exon
so has part: feature:913423-913565:1:exon
so has part: feature:913848-914036:1:exon
so has part: feature:914230-914318:1:exon
so has part: feature:914719-915074:1:exon
so has part: feature:915207-915315:1:exon
so has part: feature:916769-917149:1:exon
so has part: feature:917994-921489:1:exon

position:879330:1
position: 879330
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:879330-880733:1:exon

position:880733:1
position: 880733
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:881237-881316:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:886336-886390:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:887967-888076:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:888533-888636:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:889346-889439:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:890648-890755:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:899126-899224:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:905910-906084:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:906846-907445:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:908788-908972:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:909718-909835:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:913053-913119:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:913423-913565:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:913848-914036:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:914230-914318:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:914719-915074:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:915207-915315:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:916769-917149:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:917994-921489:1:exon

MLLT6
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8839
gene: MLLT6
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protein AF-17 isoform X3
translation: MLQKAAAGCDLQVGSVQACYGIVQVPTGPWFCRKCESQERAARVRCELCPHKDGALKRTDNGGWAHVVCALYIPEVQFANVLTMEPIVLQYVPHDRFNKTCYICEEQGRESKAASGACMACNRHGCRQAFHVTCAQMAGLLCEEEVLEVDNVKYCGYCKYHFNKMKTSRHSGGSSFIAGRRSRSTSPAQEKHVSHHERPKKSRKDKERPKQKHKKRPESPTSLTPASVPVAAEKGSTSHHEGSKETSEVGRSEVKGKKSSSHGSSHKGKKTGSGKSSAGFSSASSSGTFQPAGTSCSSLQCSQDFVTFPKLEQDDEKYRKPVSSSSSSHCSPLYEGQKGDIFEQKVIFSGFGSIMRFSTSAVSQQRGRDASPVDYKASNPVSGPSVGSSGAAGGSGSSSSHKRMPSLSMEEGEVLKEKKHKGSKKNKHGPGRPKGGKSKEILGAQLAGSTSTSSSPFSGGSLVSSSISNSSRPFSHTGNLPSLSMESPLLSSGIYTSNKDPISHGGGVLRAVCSTPLSSSLLAHQGTSSLPQLNRSPFASTIPASSSSSVSTTQVFSLAGSTFSLPSSHIFGSPLTSGLSINPLLNQSESSRAEPDLEDCSFGCRGTSPQESLSSMSPISSLPTLFDQTVSCSSSGQLENVPQATPNIEQLLEKQGNGEAGVNIVEMLKALHSLQKENQRLQEQIMTLTAKKERLQLLNVQLSVPFPVVTSSNGPGSQAQYILPANVCNNDSLSISKSPPCKNSFGIENSLSTSSEDPHSGCPSRSSSSLSFHSTPPPLPMLQQSPASLPLPGVQQVNGLARVAGSGLGGGTTASHSLSTVPMVDGLMGTLAGGQQMPINGILGNLNGAQATQPPSALTQASGPPTLQLSTSLSSVPSLSPLTEQQRHVLHQHEQQLQQLQQLLTSQPLNPEQQALVFQMMQQIQQKRELQRLQMTSSSQLSMSSLLAATSAPLLHSSTSALMTSAPQAPPSSSSLMASLSPQQLNPSNALLAPQATPPLSAPGNSLMASGTGIPPVLTAQTNPFLNLQADGNTPKGTSMNEKGAPLTQDKG
SIO_010081: MLLT6
subclass of: SO_0000673
so part of: MLLT6
location: join(880682..880733,881237..881316,886336..886390,887967..888076,888533..888636,889346..889439,890648..890755,899126..899224,905910..906084,906846..907445,908788..908972,909718..909835,913053..913119,913423..913565,913848..914036,914230..914318,914719..915074,915207..915315,916769..917149,917994..918038)
location: region:880682-918038:1
so has part: feature:880682-880733:1:exon
so has part: feature:881237-881316:1:exon
so has part: feature:886336-886390:1:exon
so has part: feature:887967-888076:1:exon
so has part: feature:888533-888636:1:exon
so has part: feature:889346-889439:1:exon
so has part: feature:890648-890755:1:exon
so has part: feature:899126-899224:1:exon
so has part: feature:905910-906084:1:exon
so has part: feature:906846-907445:1:exon
so has part: feature:908788-908972:1:exon
so has part: feature:909718-909835:1:exon
so has part: feature:913053-913119:1:exon
so has part: feature:913423-913565:1:exon
so has part: feature:913848-914036:1:exon
so has part: feature:914230-914318:1:exon
so has part: feature:914719-915074:1:exon
so has part: feature:915207-915315:1:exon
so has part: feature:916769-917149:1:exon
so has part: feature:917994-918038:1:exon

XP_027301226.1
type: Protein
SIO_000068: ncbiprotein

position:880682:1
position: 880682
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:880682-880733:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:881237-881316:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:886336-886390:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:887967-888076:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:888533-888636:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:889346-889439:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:890648-890755:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:899126-899224:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:905910-906084:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:906846-907445:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:908788-908972:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:909718-909835:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:913053-913119:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:913423-913565:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:913848-914036:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:914230-914318:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:914719-915074:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:915207-915315:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:916769-917149:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:917994-918038:1:exon

MLLT6
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8839
gene: MLLT6
product: MLLT6, PHD finger containing, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 44 samples with support for all annotated introns
transcript id: XM_027445427.2
SIO_010081: MLLT6
subclass of: SO_0000673
so part of: MLLT6
location: join(884285..885348,886336..886390,887967..888076,888533..888636,889346..889439,890648..890755,899126..899224,905910..906084,906846..907445,908788..908972,909718..909835,913053..913119,913423..913565,913848..914036,914230..914318,914719..915074,915207..915315,916769..917149,917994..921489)
location: region:884285-921489:1
so has part: feature:884285-885348:1:exon
so has part: feature:886336-886390:1:exon
so has part: feature:887967-888076:1:exon
so has part: feature:888533-888636:1:exon
so has part: feature:889346-889439:1:exon
so has part: feature:890648-890755:1:exon
so has part: feature:899126-899224:1:exon
so has part: feature:905910-906084:1:exon
so has part: feature:906846-907445:1:exon
so has part: feature:908788-908972:1:exon
so has part: feature:909718-909835:1:exon
so has part: feature:913053-913119:1:exon
so has part: feature:913423-913565:1:exon
so has part: feature:913848-914036:1:exon
so has part: feature:914230-914318:1:exon
so has part: feature:914719-915074:1:exon
so has part: feature:915207-915315:1:exon
so has part: feature:916769-917149:1:exon
so has part: feature:917994-921489:1:exon

position:884285:1
position: 884285
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:884285-885348:1:exon

position:885348:1
position: 885348
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:886336-886390:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:887967-888076:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:888533-888636:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:889346-889439:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:890648-890755:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:899126-899224:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:905910-906084:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:906846-907445:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:908788-908972:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:909718-909835:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:913053-913119:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:913423-913565:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:913848-914036:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:914230-914318:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:914719-915074:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:915207-915315:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:916769-917149:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:917994-921489:1:exon

MLLT6
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8839
gene: MLLT6
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protein AF-17 isoform X4
translation: MEPIVLQYVPHDRFNKTCYICEEQGRESKAASGACMACNRHGCRQAFHVTCAQMAGLLCEEEVLEVDNVKYCGYCKYHFNKMKTSRHSGGSSFIAGRRSRSTSPAQEKHVSHHERPKKSRKDKERPKQKHKKRPESPTSLTPASVPVAAEKGSTSHHEGSKETSEVGRSEVKGKKSSSHGSSHKGKKTGSGKSSAGFSSASSSGTFQPAGTSCSSLQCSQDFVTFPKLEQDDEKYRKPVSSSSSSHCSPLYEGQKGDIFEQKVIFSGFGSIMRFSTSAVSQQRGRDASPVDYKASNPVSGPSVGSSGAAGGSGSSSSHKRMPSLSMEEGEVLKEKKHKGSKKNKHGPGRPKGGKSKEILGAQLAGSTSTSSSPFSGGSLVSSSISNSSRPFSHTGNLPSLSMESPLLSSGIYTSNKDPISHGGGVLRAVCSTPLSSSLLAHQGTSSLPQLNRSPFASTIPASSSSSVSTTQVFSLAGSTFSLPSSHIFGSPLTSGLSINPLLNQSESSRAEPDLEDCSFGCRGTSPQESLSSMSPISSLPTLFDQTVSCSSSGQLENVPQATPNIEQLLEKQGNGEAGVNIVEMLKALHSLQKENQRLQEQIMTLTAKKERLQLLNVQLSVPFPVVTSSNGPGSQAQYILPANVCNNDSLSISKSPPCKNSFGIENSLSTSSEDPHSGCPSRSSSSLSFHSTPPPLPMLQQSPASLPLPGVQQVNGLARVAGSGLGGGTTASHSLSTVPMVDGLMGTLAGGQQMPINGILGNLNGAQATQPPSALTQASGPPTLQLSTSLSSVPSLSPLTEQQRHVLHQHEQQLQQLQQLLTSQPLNPEQQALVFQMMQQIQQKRELQRLQMTSSSQLSMSSLLAATSAPLLHSSTSALMTSAPQAPPSSSSLMASLSPQQLNPSNALLAPQATPPLSAPGNSLMASGTGIPPVLTAQTNPFLNLQADGNTPKGTSMNEKGAPLTQDKG
SIO_010081: MLLT6
subclass of: SO_0000673
so part of: MLLT6
location: join(888029..888076,888533..888636,889346..889439,890648..890755,899126..899224,905910..906084,906846..907445,908788..908972,909718..909835,913053..913119,913423..913565,913848..914036,914230..914318,914719..915074,915207..915315,916769..917149,917994..918038)
location: region:888029-918038:1
so has part: feature:888029-888076:1:exon
so has part: feature:888533-888636:1:exon
so has part: feature:889346-889439:1:exon
so has part: feature:890648-890755:1:exon
so has part: feature:899126-899224:1:exon
so has part: feature:905910-906084:1:exon
so has part: feature:906846-907445:1:exon
so has part: feature:908788-908972:1:exon
so has part: feature:909718-909835:1:exon
so has part: feature:913053-913119:1:exon
so has part: feature:913423-913565:1:exon
so has part: feature:913848-914036:1:exon
so has part: feature:914230-914318:1:exon
so has part: feature:914719-915074:1:exon
so has part: feature:915207-915315:1:exon
so has part: feature:916769-917149:1:exon
so has part: feature:917994-918038:1:exon

XP_027301228.1
type: Protein
SIO_000068: ncbiprotein

position:888029:1
position: 888029
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:888029-888076:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:888533-888636:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:889346-889439:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:890648-890755:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:899126-899224:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:905910-906084:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:906846-907445:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:908788-908972:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:909718-909835:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:913053-913119:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:913423-913565:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:913848-914036:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:914230-914318:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:914719-915074:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:915207-915315:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:916769-917149:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:917994-918038:1:exon

CISD3
type: Gene
subclass of: SO_0000704
RO_0002162: 8839
gene: CISD3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 924446..925367
location: region:924446-925367:1
so has part: feature:924446-925367:1:exon
subclass of: SO_0000010

113839992
type: Gene
SIO_000068: ncbigene

position:924446:1
position: 924446
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:925367:1
position: 925367
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:924446-925367:1:exon

CISD3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8839
gene: CISD3
product: CDGSH iron sulfur domain 3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 126 samples with support for all annotated introns
transcript id: XM_027445621.2
SIO_010081: CISD3
subclass of: SO_0000673
so part of: CISD3
location: join(924446..924676,924917..925367)
location: region:924446-925367:1
so has part: feature:924446-924676:1:exon
so has part: feature:924917-925367:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:924446-924676:1:exon

position:924676:1
position: 924676
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:924917-925367:1:exon

position:924917:1
position: 924917
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

CISD3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8839
gene: CISD3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: CDGSH iron-sulfur domain-containing protein 3, mitochondrial
translation: MLRLGAVALRVLLGGRARAPPGALRSPALSSAPSAPSSAPPQPLVVELKAGKKYAWCSCGHSKTQPFCDGSHRTAAPGVSPLRFTAEADGAAPLCACKRTRTPPFCDGSHREQAAPPGPQP
SIO_010081: CISD3
subclass of: SO_0000673
so part of: CISD3
location: join(924482..924676,924917..925087)
location: region:924482-925087:1
so has part: feature:924482-924676:1:exon
so has part: feature:924917-925087:1:exon

XP_027301422.1
type: Protein
SIO_000068: ncbiprotein

position:924482:1
position: 924482
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:925087:1
position: 925087
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:924482-924676:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:924917-925087:1:exon

PCGF2
type: Gene
subclass of: SO_0000704
RO_0002162: 8839
gene: PCGF2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(926503..934453)
location: region:926503-934453:-1
so has part: feature:926503-934453:-1:exon
subclass of: SO_0000010

106018241
type: Gene
SIO_000068: ncbigene

position:926503:-1
position: 926503
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:934453:-1
position: 934453
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:926503-934453:-1:exon

PCGF2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8839
gene: PCGF2
product: polycomb group ring finger 2, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 119 samples with support for all annotated introns
transcript id: XM_027445546.2
SIO_010081: PCGF2
subclass of: SO_0000673
so part of: PCGF2
location: complement(join(926503..927514,928055..928135,928330..928428,928602..928650,929114..929222,929306..929356,929589..929644,931236..931332,931565..931705,934333..934453))
location: region:926503-934453:-1
so has part: feature:934333-934453:-1:exon
so has part: feature:931565-931705:-1:exon
so has part: feature:931236-931332:-1:exon
so has part: feature:929589-929644:-1:exon
so has part: feature:929306-929356:-1:exon
so has part: feature:929114-929222:-1:exon
so has part: feature:928602-928650:-1:exon
so has part: feature:928330-928428:-1:exon
so has part: feature:928055-928135:-1:exon
so has part: feature:926503-927514:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:934333-934453:-1:exon

position:934333:-1
position: 934333
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:931565-931705:-1:exon

position:931565:-1
position: 931565
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:931705:-1
position: 931705
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:931236-931332:-1:exon

position:931236:-1
position: 931236
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:931332:-1
position: 931332
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:929589-929644:-1:exon

position:929589:-1
position: 929589
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:929644:-1
position: 929644
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:929306-929356:-1:exon

position:929306:-1
position: 929306
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:929356:-1
position: 929356
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:929114-929222:-1:exon

position:929114:-1
position: 929114
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:929222:-1
position: 929222
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:928602-928650:-1:exon

position:928602:-1
position: 928602
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:928650:-1
position: 928650
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:928330-928428:-1:exon

position:928330:-1
position: 928330
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:928428:-1
position: 928428
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:928055-928135:-1:exon

position:928055:-1
position: 928055
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:928135:-1
position: 928135
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:926503-927514:-1:exon

position:927514:-1
position: 927514
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

PCGF2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8839
gene: PCGF2
product: polycomb group ring finger 2, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 122 samples with support for all annotated introns
transcript id: XM_027445547.2
SIO_010081: PCGF2
subclass of: SO_0000673
so part of: PCGF2
location: complement(join(926503..927514,928055..928135,928330..928425,928602..928650,929114..929222,929306..929356,929589..929644,931236..931332,931565..933041))
location: region:926503-933041:-1
so has part: feature:931565-933041:-1:exon
so has part: feature:931236-931332:-1:exon
so has part: feature:929589-929644:-1:exon
so has part: feature:929306-929356:-1:exon
so has part: feature:929114-929222:-1:exon
so has part: feature:928602-928650:-1:exon
so has part: feature:928330-928425:-1:exon
so has part: feature:928055-928135:-1:exon
so has part: feature:926503-927514:-1:exon

position:933041:-1
position: 933041
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:931565-933041:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:931236-931332:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:929589-929644:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:929306-929356:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:929114-929222:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:928602-928650:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:928330-928425:-1:exon

position:928425:-1
position: 928425
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:928055-928135:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:926503-927514:-1:exon

PCGF2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8839
gene: PCGF2
product: polycomb group ring finger 2, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 125 samples with support for all annotated introns
transcript id: XM_038168838.1
SIO_010081: PCGF2
subclass of: SO_0000673
so part of: PCGF2
location: complement(join(926503..927514,928055..928135,928330..928428,928602..928650,929114..929222,929306..929356,929589..929644,931236..931332,931565..933038))
location: region:926503-933038:-1
so has part: feature:931565-933038:-1:exon
so has part: feature:931236-931332:-1:exon
so has part: feature:929589-929644:-1:exon
so has part: feature:929306-929356:-1:exon
so has part: feature:929114-929222:-1:exon
so has part: feature:928602-928650:-1:exon
so has part: feature:928330-928428:-1:exon
so has part: feature:928055-928135:-1:exon
so has part: feature:926503-927514:-1:exon

position:933038:-1
position: 933038
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:931565-933038:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:931236-931332:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:929589-929644:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:929306-929356:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:929114-929222:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:928602-928650:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:928330-928428:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:928055-928135:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:926503-927514:-1:exon

PCGF2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8839
gene: PCGF2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: polycomb group RING finger protein 2 isoform X2
translation: MPAPRGPVCTPGLAHSALHTWPCTLSFAHSSVHTQPPPGARVRSWPRAGGRPQSPGVSIETTRRWLEMPFSPNSPKIRSCLCVCACARVCVCVHSPGSCRQDPLGDQEMRTRIQGSWVGAAWGCAWGLLLPPRAVGCGVGAAPAPPGWICPSEAEGGPAGPGLAPSGCFGDFPAGRIPPRRCSKMHRTTRIKITELNPHLMCALCGGYFIDATTIVECLHSFCKTCIVRYLETNKYCPMCDVQVHKTRPLLSIRSDKTLQDIVYKLVPGLFKDEMKRRRDFYAAYPMAEVPNGSNEDRGEVSEQDKGNLADDEIVSLSIEFYEGTREEKKGSIENGDLEKDKNGVRFLRCPAAMTVMHLAKFLRNKMDVPSKYKVEVLYEDEPLREYYTLMDIAYIYPWRRNGPLPLKYRVQPACKRLKLSQPATSECTNTSGASECESVSDKAHSPATLPATSSSLPSPGTPSHGSPSSTAGSGPGPALNGSSSNCHPLPPAASRCRKTTVNGSTASALT
SIO_010081: PCGF2
subclass of: SO_0000673
so part of: PCGF2
location: complement(join(927182..927514,928055..928135,928330..928425,928602..928650,929114..929222,929306..929356,929589..929644,931236..931332,931565..932228))
location: region:927182-932228:-1
so has part: feature:931565-932228:-1:exon
so has part: feature:931236-931332:-1:exon
so has part: feature:929589-929644:-1:exon
so has part: feature:929306-929356:-1:exon
so has part: feature:929114-929222:-1:exon
so has part: feature:928602-928650:-1:exon
so has part: feature:928330-928425:-1:exon
so has part: feature:928055-928135:-1:exon
so has part: feature:927182-927514:-1:exon

XP_027301348.2
type: Protein
SIO_000068: ncbiprotein

position:927182:-1
position: 927182
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:932228:-1
position: 932228
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:931565-932228:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:931236-931332:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:929589-929644:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:929306-929356:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:929114-929222:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:928602-928650:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:928330-928425:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:928055-928135:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:927182-927514:-1:exon

PCGF2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8839
gene: PCGF2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: polycomb group RING finger protein 2 isoform X1
translation: MPAPRGPVCTPGLAHSALHTWPCTLSFAHSSVHTQPPPGARVRSWPRAGGRPQSPGVSIETTRRWLEMPFSPNSPKIRSCLCVCACARVCVCVHSPGSCRQDPLGDQEMRTRIQGSWVGAAWGCAWGLLLPPRAVGCGVGAAPAPPGWICPSEAEGGPAGPGLAPSGCFGDFPAGRIPPRRCSKMHRTTRIKITELNPHLMCALCGGYFIDATTIVECLHSFCKTCIVRYLETNKYCPMCDVQVHKTRPLLSIRSDKTLQDIVYKLVPGLFKDEMKRRRDFYAAYPMAEVPNGSNEDRGEVSEQDKGNLADDEIVSLSIEFYEGTREEKKGSIENGDLEKDKKNGVRFLRCPAAMTVMHLAKFLRNKMDVPSKYKVEVLYEDEPLREYYTLMDIAYIYPWRRNGPLPLKYRVQPACKRLKLSQPATSECTNTSGASECESVSDKAHSPATLPATSSSLPSPGTPSHGSPSSTAGSGPGPALNGSSSNCHPLPPAASRCRKTTVNGSTASALT
SIO_010081: PCGF2
subclass of: SO_0000673
so part of: PCGF2
location: complement(join(927182..927514,928055..928135,928330..928428,928602..928650,929114..929222,929306..929356,929589..929644,931236..931332,931565..932228))
location: region:927182-932228:-1
so has part: feature:931565-932228:-1:exon
so has part: feature:931236-931332:-1:exon
so has part: feature:929589-929644:-1:exon
so has part: feature:929306-929356:-1:exon
so has part: feature:929114-929222:-1:exon
so has part: feature:928602-928650:-1:exon
so has part: feature:928330-928428:-1:exon
so has part: feature:928055-928135:-1:exon
so has part: feature:927182-927514:-1:exon

XP_038024766.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:931565-932228:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:931236-931332:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:929589-929644:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:929306-929356:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:929114-929222:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:928602-928650:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:928330-928428:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:928055-928135:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:927182-927514:-1:exon

PCGF2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8839
gene: PCGF2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: polycomb group RING finger protein 2 isoform X3
translation: MHRTTRIKITELNPHLMCALCGGYFIDATTIVECLHSFCKTCIVRYLETNKYCPMCDVQVHKTRPLLSIRSDKTLQDIVYKLVPGLFKDEMKRRRDFYAAYPMAEVPNGSNEDRGEVSEQDKGNLADDEIVSLSIEFYEGTREEKKGSIENGDLEKDKKNGVRFLRCPAAMTVMHLAKFLRNKMDVPSKYKVEVLYEDEPLREYYTLMDIAYIYPWRRNGPLPLKYRVQPACKRLKLSQPATSECTNTSGASECESVSDKAHSPATLPATSSSLPSPGTPSHGSPSSTAGSGPGPALNGSSSNCHPLPPAASRCRKTTVNGSTASALT
SIO_010081: PCGF2
subclass of: SO_0000673
so part of: PCGF2
location: complement(join(927182..927514,928055..928135,928330..928428,928602..928650,929114..929222,929306..929356,929589..929644,931236..931332,931565..931676))
location: region:927182-931676:-1
so has part: feature:931565-931676:-1:exon
so has part: feature:931236-931332:-1:exon
so has part: feature:929589-929644:-1:exon
so has part: feature:929306-929356:-1:exon
so has part: feature:929114-929222:-1:exon
so has part: feature:928602-928650:-1:exon
so has part: feature:928330-928428:-1:exon
so has part: feature:928055-928135:-1:exon
so has part: feature:927182-927514:-1:exon

XP_027301347.1
type: Protein
SIO_000068: ncbiprotein

position:931676:-1
position: 931676
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:931565-931676:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:931236-931332:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:929589-929644:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:929306-929356:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:929114-929222:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:928602-928650:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:928330-928428:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:928055-928135:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:927182-927514:-1:exon

TRNAN-GUU
type: Gene
subclass of: SO_0000704
RO_0002162: 8839
gene: TRNAN-GUU
note: Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
so part of: sequence
location: 935538..935611
location: region:935538-935611:1
so has part: feature:935538-935611:1:exon
subclass of: SO_0000663

113840066
type: Gene
SIO_000068: ncbigene

position:935538:1
position: 935538
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:935611:1
position: 935611
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:935538-935611:1:exon

TRNAN-GUU
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 8839
gene: TRNAN-GUU
product: tRNA-Asn
inference: COORDINATES: profile:tRNAscan-SE:2.0.4
note: transfer RNA asparagine (anticodon GUU); Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
anticodon: (pos:935572..935574,aa:Asn,seq:gtt)
SIO_010081: TRNAN-GUU
subclass of: SO_0000673
so part of: TRNAN-GUU
location: 935538..935611
location: region:935538-935611:1
so has part: feature:935538-935611:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:935538-935611:1:exon

PSMB3
type: Gene
subclass of: SO_0000704
RO_0002162: 8839
gene: PSMB3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 937883..940850
location: region:937883-940850:1
so has part: feature:937883-940850:1:exon
subclass of: SO_0000010

101802886
type: Gene
SIO_000068: ncbigene

position:937883:1
position: 937883
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:940850:1
position: 940850
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:937883-940850:1:exon

PSMB3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8839
gene: PSMB3
product: proteasome 20S subunit beta 3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 24 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 126 samples with support for all annotated introns
transcript id: XM_027445557.2
SIO_010081: PSMB3
subclass of: SO_0000673
so part of: PSMB3
location: join(937883..938041,938487..938671,939192..939299,939702..939879,940139..940233,940717..940850)
location: region:937883-940850:1
so has part: feature:937883-938041:1:exon
so has part: feature:938487-938671:1:exon
so has part: feature:939192-939299:1:exon
so has part: feature:939702-939879:1:exon
so has part: feature:940139-940233:1:exon
so has part: feature:940717-940850:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:937883-938041:1:exon

position:938041:1
position: 938041
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:938487-938671:1:exon

position:938487:1
position: 938487
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:938671:1
position: 938671
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:939192-939299:1:exon

position:939192:1
position: 939192
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:939299:1
position: 939299
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:939702-939879:1:exon

position:939702:1
position: 939702
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:939879:1
position: 939879
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:940139-940233:1:exon

position:940139:1
position: 940139
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:940233:1
position: 940233
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:940717-940850:1:exon

position:940717:1
position: 940717
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

PSMB3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8839
gene: PSMB3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: proteasome subunit beta type-3
translation: MACGERRAAANGRRREAGRRSRSSGGGRSRSSRAGPGGGATTATMSIMSYNGGAVMAMKGKGCVAIAADRRFGIQAQMVTTDFQKIFPMGERLYIGLAGLATDVQTVAQRLKFRLNLYELKEGRQIKPQTFMSMVSNLLYERRFGPYYTEPVIAGLDPITHEPFICSLDLIGCPMITDDFVVSGTCSEQMYGMCESLWEPDMEPDHLFETISQAMLNAVDRDAVSGMGVIVHIIEKDKITTRTLKARMD
SIO_010081: PSMB3
subclass of: SO_0000673
so part of: PSMB3
location: join(937907..938041,938487..938671,939192..939299,939702..939879,940139..940233,940717..940765)
location: region:937907-940765:1
so has part: feature:937907-938041:1:exon
so has part: feature:938487-938671:1:exon
so has part: feature:939192-939299:1:exon
so has part: feature:939702-939879:1:exon
so has part: feature:940139-940233:1:exon
so has part: feature:940717-940765:1:exon

XP_027301358.1
type: Protein
SIO_000068: ncbiprotein

position:937907:1
position: 937907
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:940765:1
position: 940765
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:937907-938041:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:938487-938671:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:939192-939299:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:939702-939879:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:940139-940233:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:940717-940765:1:exon

PIP4K2B
type: Gene
subclass of: SO_0000704
RO_0002162: 8839
gene: PIP4K2B
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(941239..961378)
location: region:941239-961378:-1
so has part: feature:941239-961378:-1:exon
subclass of: SO_0000010

101802700
type: Gene
SIO_000068: ncbigene

position:941239:-1
position: 941239
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:961378:-1
position: 961378
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:941239-961378:-1:exon

PIP4K2B
type: Miscellaneous RNA
subclass of: SO_0000673
RO_0002162: 8839
gene: PIP4K2B
product: phosphatidylinositol-5-phosphate 4-kinase type 2 beta, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 99 samples with support for all annotated introns
transcript id: XR_005261218.1
SIO_010081: PIP4K2B
so part of: PIP4K2B
location: complement(join(941239..942937,943786..943822,944354..946092,946717..946820,947172..947430,947809..947922,949036..949074,949467..949613,950138..950290,953446..953542,954258..954355,961133..961378))
location: region:941239-961378:-1
so has part: feature:961133-961378:-1:exon
so has part: feature:954258-954355:-1:exon
so has part: feature:953446-953542:-1:exon
so has part: feature:950138-950290:-1:exon
so has part: feature:949467-949613:-1:exon
so has part: feature:949036-949074:-1:exon
so has part: feature:947809-947922:-1:exon
so has part: feature:947172-947430:-1:exon
so has part: feature:946717-946820:-1:exon
so has part: feature:944354-946092:-1:exon
so has part: feature:943786-943822:-1:exon
so has part: feature:941239-942937:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:961133-961378:-1:exon

position:961133:-1
position: 961133
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:954258-954355:-1:exon

position:954258:-1
position: 954258
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:954355:-1
position: 954355
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:953446-953542:-1:exon

position:953446:-1
position: 953446
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:953542:-1
position: 953542
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:950138-950290:-1:exon

position:950138:-1
position: 950138
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:950290:-1
position: 950290
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:949467-949613:-1:exon

position:949467:-1
position: 949467
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:949613:-1
position: 949613
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:949036-949074:-1:exon

position:949036:-1
position: 949036
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:949074:-1
position: 949074
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:947809-947922:-1:exon

position:947809:-1
position: 947809
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:947922:-1
position: 947922
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:947172-947430:-1:exon

position:947172:-1
position: 947172
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:947430:-1
position: 947430
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:946717-946820:-1:exon

position:946717:-1
position: 946717
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:946820:-1
position: 946820
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:944354-946092:-1:exon

position:944354:-1
position: 944354
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:946092:-1
position: 946092
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:943786-943822:-1:exon

position:943786:-1
position: 943786
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:943822:-1
position: 943822
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:941239-942937:-1:exon

position:942937:-1
position: 942937
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

PIP4K2B
type: Miscellaneous RNA
subclass of: SO_0000673
RO_0002162: 8839
gene: PIP4K2B
product: phosphatidylinositol-5-phosphate 4-kinase type 2 beta, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 106 samples with support for all annotated introns
transcript id: XR_003492672.2
SIO_010081: PIP4K2B
so part of: PIP4K2B
location: complement(join(941239..943822,944354..946092,946717..946820,947172..947430,947809..947922,949036..949074,949467..949613,950138..950290,953446..953542,954258..954355,961133..961378))
location: region:941239-961378:-1
so has part: feature:961133-961378:-1:exon
so has part: feature:954258-954355:-1:exon
so has part: feature:953446-953542:-1:exon
so has part: feature:950138-950290:-1:exon
so has part: feature:949467-949613:-1:exon
so has part: feature:949036-949074:-1:exon
so has part: feature:947809-947922:-1:exon
so has part: feature:947172-947430:-1:exon
so has part: feature:946717-946820:-1:exon
so has part: feature:944354-946092:-1:exon
so has part: feature:941239-943822:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:961133-961378:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:954258-954355:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:953446-953542:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:950138-950290:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:949467-949613:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:949036-949074:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:947809-947922:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:947172-947430:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:946717-946820:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:944354-946092:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:941239-943822:-1:exon

PIP4K2B
type: Miscellaneous RNA
subclass of: SO_0000673
RO_0002162: 8839
gene: PIP4K2B
product: phosphatidylinositol-5-phosphate 4-kinase type 2 beta, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 107 samples with support for all annotated introns
transcript id: XR_005261217.1
SIO_010081: PIP4K2B
so part of: PIP4K2B
location: complement(join(941239..942937,943786..946092,946717..946820,947172..947430,947809..947922,949036..949074,949467..949613,950138..950290,953446..953542,954258..954355,961133..961378))
location: region:941239-961378:-1
so has part: feature:961133-961378:-1:exon
so has part: feature:954258-954355:-1:exon
so has part: feature:953446-953542:-1:exon
so has part: feature:950138-950290:-1:exon
so has part: feature:949467-949613:-1:exon
so has part: feature:949036-949074:-1:exon
so has part: feature:947809-947922:-1:exon
so has part: feature:947172-947430:-1:exon
so has part: feature:946717-946820:-1:exon
so has part: feature:943786-946092:-1:exon
so has part: feature:941239-942937:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:961133-961378:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:954258-954355:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:953446-953542:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:950138-950290:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:949467-949613:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:949036-949074:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:947809-947922:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:947172-947430:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:946717-946820:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:943786-946092:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:941239-942937:-1:exon

PIP4K2B
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8839
gene: PIP4K2B
product: phosphatidylinositol-5-phosphate 4-kinase type 2 beta, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 125 samples with support for all annotated introns
transcript id: XM_027445531.2
SIO_010081: PIP4K2B
subclass of: SO_0000673
so part of: PIP4K2B
location: complement(join(941245..946092,946717..946820,947172..947430,947809..947922,949036..949074,949467..949613,950138..950290,953446..953542,954258..954355,961133..961378))
location: region:941245-961378:-1
so has part: feature:961133-961378:-1:exon
so has part: feature:954258-954355:-1:exon
so has part: feature:953446-953542:-1:exon
so has part: feature:950138-950290:-1:exon
so has part: feature:949467-949613:-1:exon
so has part: feature:949036-949074:-1:exon
so has part: feature:947809-947922:-1:exon
so has part: feature:947172-947430:-1:exon
so has part: feature:946717-946820:-1:exon
so has part: feature:941245-946092:-1:exon

position:941245:-1
position: 941245
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:961133-961378:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:954258-954355:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:953446-953542:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:950138-950290:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:949467-949613:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:949036-949074:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:947809-947922:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:947172-947430:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:946717-946820:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:941245-946092:-1:exon

PIP4K2B
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8839
gene: PIP4K2B
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: phosphatidylinositol 5-phosphate 4-kinase type-2 beta
translation: MASNCAGGSAAAGGGGGGGGGGGGGGGGGGGVVGGLSSALSASKTKTKKKHFVCQKVKLFRASEPLLSVLMWGANHTINELSNVPIPVMLMPDDFKAYSKIKVDNHLFNKENLPSRFKFKEYCPLVFRNLRERFGIDDQDYQNSVTRSAPVNSDSQGRCGARFLTTYDRRFVIKAVSSEDVAEMHNILKKYHQFIVECHGNTLLPQFLGMYRLTVDGVETYMVVTRNVFSHRLTVHRKYDLKGSTVSREASDKEKAKDLPTFKDNDFLNEGQKLHVGEESKKNFLEKLKRDVEFLAQLKIMDYSLLVGIHDVDRAEQEEMEVEDRAEDEECENDGLGGNPISSYGTPPDSPGNLLNYPRFFGPGEFDPSVDVYAMKSHESAPKKEVYFMAIIDILTPYDAKKKAAHAAKTVKHGAGAEISTVNPEQYSKRFNEFMSNILT
SIO_010081: PIP4K2B
subclass of: SO_0000673
so part of: PIP4K2B
location: complement(join(946012..946092,946717..946820,947172..947430,947809..947922,949036..949074,949467..949613,950138..950290,953446..953542,954258..954355,961133..961363))
location: region:946012-961363:-1
so has part: feature:961133-961363:-1:exon
so has part: feature:954258-954355:-1:exon
so has part: feature:953446-953542:-1:exon
so has part: feature:950138-950290:-1:exon
so has part: feature:949467-949613:-1:exon
so has part: feature:949036-949074:-1:exon
so has part: feature:947809-947922:-1:exon
so has part: feature:947172-947430:-1:exon
so has part: feature:946717-946820:-1:exon
so has part: feature:946012-946092:-1:exon

XP_027301332.2
type: Protein
SIO_000068: ncbiprotein

position:946012:-1
position: 946012
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:961363:-1
position: 961363
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:961133-961363:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:954258-954355:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:953446-953542:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:950138-950290:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:949467-949613:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:949036-949074:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:947809-947922:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:947172-947430:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:946717-946820:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:946012-946092:-1:exon

CWC25
type: Gene
subclass of: SO_0000704
RO_0002162: 8839
gene: CWC25
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(962123..968263)
location: region:962123-968263:-1
so has part: feature:962123-968263:-1:exon
subclass of: SO_0000010

101802510
type: Gene
SIO_000068: ncbigene

position:962123:-1
position: 962123
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:968263:-1
position: 968263
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:962123-968263:-1:exon

CWC25
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8839
gene: CWC25
product: CWC25 spliceosome associated protein homolog
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 126 samples with support for all annotated introns
transcript id: XM_027445513.2
SIO_010081: CWC25
subclass of: SO_0000673
so part of: CWC25
location: complement(join(962123..962826,963572..963733,964324..964404,964975..965165,965631..965700,965939..966066,966419..966488,967113..967349,967613..967785,968106..968263))
location: region:962123-968263:-1
so has part: feature:968106-968263:-1:exon
so has part: feature:967613-967785:-1:exon
so has part: feature:967113-967349:-1:exon
so has part: feature:966419-966488:-1:exon
so has part: feature:965939-966066:-1:exon
so has part: feature:965631-965700:-1:exon
so has part: feature:964975-965165:-1:exon
so has part: feature:964324-964404:-1:exon
so has part: feature:963572-963733:-1:exon
so has part: feature:962123-962826:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:968106-968263:-1:exon

position:968106:-1
position: 968106
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:967613-967785:-1:exon

position:967613:-1
position: 967613
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:967785:-1
position: 967785
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:967113-967349:-1:exon