Anas platyrhynchos isolate Z2 breed Pekin duck chromosome 26, ZJU1.0, whole genome shotgun sequence.
type: Entry
definition: Anas platyrhynchos isolate Z2 breed Pekin duck chromosome 26, ZJU1.0, whole genome shotgun sequence.
sequence version: NC_051797.1
sequence date: 2020-12-15
sequence: sequence
division: CON
label: NC_051797.1
type: RefSeq
SIO_000068: refseq
dblink: PRJNA681492
dblink: SAMN15588841
keyword: WGS
keyword: RefSeq
source: Anas platyrhynchos (mallard)
organism: Anas platyrhynchos
taxonomy: Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Galloanserae; Anseriformes; Anatidae; Anatinae; Anas.
comment: REFSEQ INFORMATION: The reference sequence is identical to\nCM027268.1.\nAssembly name: ZJU1.0\nThe genomic sequence for this RefSeq record is from the\nwhole-genome assembly released by the Zhejiang University on\n2020/11/23. The original whole-genome shotgun project has the\naccession JACGAL000000000.1.\n\n##Genome-Assembly-Data-START##\nAssembly Provider :: Zhejiang University\nAssembly Method :: FALCON-Unzip v. git 12072017\nAssembly Name :: ZJU1.0\nGenome Representation :: Full\nExpected Final Version :: No\nGenome Coverage :: 143.0x\nSequencing Technology :: PacBio RSII; PacBio Sequel\n##Genome-Assembly-Data-END##\n\n##Genome-Annotation-Data-START##\nAnnotation Provider :: NCBI\nAnnotation Status :: Full annotation\nAnnotation Name :: Anas platyrhynchos Annotation\n Release 104\nAnnotation Version :: 104\nAnnotation Pipeline :: NCBI eukaryotic genome annotation\n pipeline\nAnnotation Software Version :: 8.5\nAnnotation Method :: Best-placed RefSeq; Gnomon\nFeatures Annotated :: Gene; mRNA; CDS; ncRNA\n##Genome-Annotation-Data-END##

sequence
subclass of: SO_0000340
sequence length: 3037671
topology: linear
so has quality: SO_0000987
location: 1..3037671
location: region:1-3037671:1
RO_0002162: 8839

NC_051797
type: RefSeq
SIO_000068: refseq

PRJNA681492
type: BioProject
SIO_000068: bioproject

SAMN15588841
type: BioSample
SIO_000068: biosample

position:1:1
position: 1
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3037671:1
position: 3037671
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

feature:1-3037671:1:source
so part of: sequence
organism: Anas platyrhynchos
mol type: genomic DNA
isolate: Z2
chromosome: 26
sex: pooled male and female
tissue type: multiple
dev stage: adult
breed: Pekin duck

8839
type: Taxonomy
SIO_000068: taxonomy

BCAN
type: Gene
subclass of: SO_0000704
RO_0002162: 8839
gene: BCAN
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 5836..18684
location: region:5836-18684:1
so has part: feature:5836-18684:1:exon
subclass of: SO_0000010

110354568
type: Gene
SIO_000068: ncbigene

position:5836:1
position: 5836
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:18684:1
position: 18684
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5836-18684:1:exon

BCAN
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8839
gene: BCAN
product: brevican, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 15 samples with support for all annotated introns
transcript id: XM_038168080.1
SIO_010081: BCAN
subclass of: SO_0000673
so part of: BCAN
location: join(5836..6028,9930..10028,10137..10529,10678..10852,11004..11131,11805..12098,13153..13596,14089..14886,16654..16761,16915..17073,17494..17576,17874..18018,18207..18389,18498..18684)
location: region:5836-18684:1
so has part: feature:5836-6028:1:exon
so has part: feature:9930-10028:1:exon
so has part: feature:10137-10529:1:exon
so has part: feature:10678-10852:1:exon
so has part: feature:11004-11131:1:exon
so has part: feature:11805-12098:1:exon
so has part: feature:13153-13596:1:exon
so has part: feature:14089-14886:1:exon
so has part: feature:16654-16761:1:exon
so has part: feature:16915-17073:1:exon
so has part: feature:17494-17576:1:exon
so has part: feature:17874-18018:1:exon
so has part: feature:18207-18389:1:exon
so has part: feature:18498-18684:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:5836-6028:1:exon

position:6028:1
position: 6028
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:9930-10028:1:exon

position:9930:1
position: 9930
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:10028:1
position: 10028
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:10137-10529:1:exon

position:10137:1
position: 10137
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:10529:1
position: 10529
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:10678-10852:1:exon

position:10678:1
position: 10678
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:10852:1
position: 10852
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:11004-11131:1:exon

position:11004:1
position: 11004
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:11131:1
position: 11131
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:11805-12098:1:exon

position:11805:1
position: 11805
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:12098:1
position: 12098
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:13153-13596:1:exon

position:13153:1
position: 13153
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:13596:1
position: 13596
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:14089-14886:1:exon

position:14089:1
position: 14089
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:14886:1
position: 14886
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:16654-16761:1:exon

position:16654:1
position: 16654
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:16761:1
position: 16761
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:16915-17073:1:exon

position:16915:1
position: 16915
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:17073:1
position: 17073
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:17494-17576:1:exon

position:17494:1
position: 17494
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:17576:1
position: 17576
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:17874-18018:1:exon

position:17874:1
position: 17874
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:18018:1
position: 18018
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:18207-18389:1:exon

position:18207:1
position: 18207
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:18389:1
position: 18389
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:18498-18684:1:exon

position:18498:1
position: 18498
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

BCAN
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8839
gene: BCAN
product: brevican, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 15 samples with support for all annotated introns
transcript id: XM_038168081.1
SIO_010081: BCAN
subclass of: SO_0000673
so part of: BCAN
location: join(5895..6028,9930..10028,10137..10529,10678..10852,11004..11131,11805..12098,14089..14886,16654..16761,16915..17073,17494..17576,17874..18018,18207..18389,18498..18684)
location: region:5895-18684:1
so has part: feature:5895-6028:1:exon
so has part: feature:9930-10028:1:exon
so has part: feature:10137-10529:1:exon
so has part: feature:10678-10852:1:exon
so has part: feature:11004-11131:1:exon
so has part: feature:11805-12098:1:exon
so has part: feature:14089-14886:1:exon
so has part: feature:16654-16761:1:exon
so has part: feature:16915-17073:1:exon
so has part: feature:17494-17576:1:exon
so has part: feature:17874-18018:1:exon
so has part: feature:18207-18389:1:exon
so has part: feature:18498-18684:1:exon

position:5895:1
position: 5895
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5895-6028:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:9930-10028:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:10137-10529:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:10678-10852:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:11004-11131:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:11805-12098:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:14089-14886:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:16654-16761:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:16915-17073:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:17494-17576:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:17874-18018:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:18207-18389:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:18498-18684:1:exon

BCAN
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8839
gene: BCAN
product: brevican, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 12 samples with support for all annotated introns
transcript id: XM_038168079.1
SIO_010081: BCAN
subclass of: SO_0000673
so part of: BCAN
location: join(5895..6028,9930..10028,10137..10529,10678..10852,11004..11131,13153..13596,14089..14886,16654..16761,16915..17073,17494..17576,17874..18018,18207..18389,18498..18684)
location: region:5895-18684:1
so has part: feature:5895-6028:1:exon
so has part: feature:9930-10028:1:exon
so has part: feature:10137-10529:1:exon
so has part: feature:10678-10852:1:exon
so has part: feature:11004-11131:1:exon
so has part: feature:13153-13596:1:exon
so has part: feature:14089-14886:1:exon
so has part: feature:16654-16761:1:exon
so has part: feature:16915-17073:1:exon
so has part: feature:17494-17576:1:exon
so has part: feature:17874-18018:1:exon
so has part: feature:18207-18389:1:exon
so has part: feature:18498-18684:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:5895-6028:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:9930-10028:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:10137-10529:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:10678-10852:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:11004-11131:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:13153-13596:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:14089-14886:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:16654-16761:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:16915-17073:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:17494-17576:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:17874-18018:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:18207-18389:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:18498-18684:1:exon

BCAN
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8839
gene: BCAN
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: brevican core protein isoform X2
translation: MASALPLLLLLLCAFTPAVVPEVLGPGDGTDDLKALQVSIPRHPALDAVLAGDVTIPCLITYLGPLPTTGTAGRRAVLGAPRVKWTFISEGREVEILVARGDRVKVSEDYRLRASLPIFHQRYTNASLLLTELRPNDSGIYRCDVQHGIEDGHDILDLRVKGVVFHYREGSMRYAYTFAQAQEACARIGARIATPEQLYAAYLGGYEQCDAGWIADQTVRYPIHTPREACYGDMNGFPGVRNYGVVDPEDMYDVYCYAEDLPGEIFLETAPDKFTLEEAEELCRARGAALASPGQLYAAWSAGLDACSPGWLADGSVRYPIVTPRERCGGALPGVKTIFLFRNQTGFPDAHSRYDAYCFREGTNSIPEAAGKYGAGEPEGLQEIVTVAEKLEELQLPKAQVEIESRGAIYAVPFFKDAADAELEKPSLAPEDAPGPGARHPPLATSVSSARGRHPASAAPFPTAPAVPEAGVPLSCGAKAGSPSPADEEGATGTGGKCAEAGREPSRTGEEGAAVGSALGGDPRNTAAESLEGRRDPGQPTEPDTAGAEGPSDALSPAVASAGDTEPPDEQPQPPAAPSSLPSRPREAVGRPAHTRSPGPPGHGDSGVTPPTRAASATSTDSQEPAPGTHGRGSGPAAGGAEDAELSGDVAESPRGASPLPPSQLQEDGEEQSGALWLPSPAAPGDGGTVPAVEATVVTPWHTEVPGGSDAPATGHEAVPQTPGTAHGTPAASSEEEEEKEKEEEEEEEEEEEERPVPSVATVEGFLPAVPGEPGGCVPNPCLNGGTCTEDGAHLACLCLPGYGGSSCERPLRRCSPGWDSFQGACYKHFSTRRSWEDAETQCRHYGGHLATILTPEEQDFINDQYREYQWIGLNDRTIEGDFQWSDGSPLLYENWHPGQPDSYFLSGENCVVIVWHDGGQWSDVPCNYHLSYTCKMGLVQCGPPPAVGNAHAFGKAKPRYEVGSTARYQCRRGFAPRRSPLIRCREDGTWEQPQLSCRPGLAQHPGD
SIO_010081: BCAN
subclass of: SO_0000673
so part of: BCAN
location: join(9938..10028,10137..10529,10678..10852,11004..11131,11805..12098,13153..13596,14089..14886,16654..16761,16915..17073,17494..17576,17874..18018,18207..18389,18498..18523)
location: region:9938-18523:1
so has part: feature:9938-10028:1:exon
so has part: feature:10137-10529:1:exon
so has part: feature:10678-10852:1:exon
so has part: feature:11004-11131:1:exon
so has part: feature:11805-12098:1:exon
so has part: feature:13153-13596:1:exon
so has part: feature:14089-14886:1:exon
so has part: feature:16654-16761:1:exon
so has part: feature:16915-17073:1:exon
so has part: feature:17494-17576:1:exon
so has part: feature:17874-18018:1:exon
so has part: feature:18207-18389:1:exon
so has part: feature:18498-18523:1:exon

XP_038024008.1
type: Protein
SIO_000068: ncbiprotein

position:9938:1
position: 9938
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:18523:1
position: 18523
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:9938-10028:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:10137-10529:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:10678-10852:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:11004-11131:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:11805-12098:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:13153-13596:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:14089-14886:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:16654-16761:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:16915-17073:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:17494-17576:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:17874-18018:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:18207-18389:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:18498-18523:1:exon

BCAN
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8839
gene: BCAN
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: brevican core protein isoform X3
translation: MASALPLLLLLLCAFTPAVVPEVLGPGDGTDDLKALQVSIPRHPALDAVLAGDVTIPCLITYLGPLPTTGTAGRRAVLGAPRVKWTFISEGREVEILVARGDRVKVSEDYRLRASLPIFHQRYTNASLLLTELRPNDSGIYRCDVQHGIEDGHDILDLRVKGVVFHYREGSMRYAYTFAQAQEACARIGARIATPEQLYAAYLGGYEQCDAGWIADQTVRYPIHTPREACYGDMNGFPGVRNYGVVDPEDMYDVYCYAEDLPGEIFLETAPDKFTLEEAEELCRARGAALASPGQLYAAWSAGLDACSPGWLADGSVRYPIVTPRERCGGALPGVKTIFLFRNQTGFPDAHSRYDAYCFRGEEGAAVGSALGGDPRNTAAESLEGRRDPGQPTEPDTAGAEGPSDALSPAVASAGDTEPPDEQPQPPAAPSSLPSRPREAVGRPAHTRSPGPPGHGDSGVTPPTRAASATSTDSQEPAPGTHGRGSGPAAGGAEDAELSGDVAESPRGASPLPPSQLQEDGEEQSGALWLPSPAAPGDGGTVPAVEATVVTPWHTEVPGGSDAPATGHEAVPQTPGTAHGTPAASSEEEEEKEKEEEEEEEEEEEERPVPSVATVEGFLPAVPGEPGGCVPNPCLNGGTCTEDGAHLACLCLPGYGGSSCERPLRRCSPGWDSFQGACYKHFSTRRSWEDAETQCRHYGGHLATILTPEEQDFINDQYREYQWIGLNDRTIEGDFQWSDGSPLLYENWHPGQPDSYFLSGENCVVIVWHDGGQWSDVPCNYHLSYTCKMGLVQCGPPPAVGNAHAFGKAKPRYEVGSTARYQCRRGFAPRRSPLIRCREDGTWEQPQLSCRPGLAQHPGD
SIO_010081: BCAN
subclass of: SO_0000673
so part of: BCAN
location: join(9938..10028,10137..10529,10678..10852,11004..11131,11805..12098,14089..14886,16654..16761,16915..17073,17494..17576,17874..18018,18207..18389,18498..18523)
location: region:9938-18523:1
so has part: feature:9938-10028:1:exon
so has part: feature:10137-10529:1:exon
so has part: feature:10678-10852:1:exon
so has part: feature:11004-11131:1:exon
so has part: feature:11805-12098:1:exon
so has part: feature:14089-14886:1:exon
so has part: feature:16654-16761:1:exon
so has part: feature:16915-17073:1:exon
so has part: feature:17494-17576:1:exon
so has part: feature:17874-18018:1:exon
so has part: feature:18207-18389:1:exon
so has part: feature:18498-18523:1:exon

XP_038024009.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:9938-10028:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:10137-10529:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:10678-10852:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:11004-11131:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:11805-12098:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:14089-14886:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:16654-16761:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:16915-17073:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:17494-17576:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:17874-18018:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:18207-18389:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:18498-18523:1:exon

BCAN
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8839
gene: BCAN
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: brevican core protein isoform X1
translation: MASALPLLLLLLCAFTPAVVPEVLGPGDGTDDLKALQVSIPRHPALDAVLAGDVTIPCLITYLGPLPTTGTAGRRAVLGAPRVKWTFISEGREVEILVARGDRVKVSEDYRLRASLPIFHQRYTNASLLLTELRPNDSGIYRCDVQHGIEDGHDILDLRVKGVVFHYREGSMRYAYTFAQAQEACARIGARIATPEQLYAAYLGGYEQCDAGWIADQTVRYPIHTPREACYGDMNGFPGVRNYGVVDPEDMYDVYCYAEDLPEGTNSIPEAAGKYGAGEPEGLQEIVTVAEKLEELQLPKAQVEIESRGAIYAVPFFKDAADAELEKPSLAPEDAPGPGARHPPLATSVSSARGRHPASAAPFPTAPAVPEAGVPLSCGAKAGSPSPADEEGATGTGGKCAEAGREPSRTGEEGAAVGSALGGDPRNTAAESLEGRRDPGQPTEPDTAGAEGPSDALSPAVASAGDTEPPDEQPQPPAAPSSLPSRPREAVGRPAHTRSPGPPGHGDSGVTPPTRAASATSTDSQEPAPGTHGRGSGPAAGGAEDAELSGDVAESPRGASPLPPSQLQEDGEEQSGALWLPSPAAPGDGGTVPAVEATVVTPWHTEVPGGSDAPATGHEAVPQTPGTAHGTPAASSEEEEEKEKEEEEEEEEEEEERPVPSVATVEGFLPAVPGEPGGCVPNPCLNGGTCTEDGAHLACLCLPGYGGSSCERPLRRCSPGWDSFQGACYKHFSTRRSWEDAETQCRHYGGHLATILTPEEQDFINDQYREYQWIGLNDRTIEGDFQWSDGSPLLYENWHPGQPDSYFLSGENCVVIVWHDGGQWSDVPCNYHLSYTCKMGLVQCGPPPAVGNAHAFGKAKPRYEVGSTARYQCRRGFAPRRSPLIRCREDGTWEQPQLSCRPGLAQHPGD
SIO_010081: BCAN
subclass of: SO_0000673
so part of: BCAN
location: join(9938..10028,10137..10529,10678..10852,11004..11131,13153..13596,14089..14886,16654..16761,16915..17073,17494..17576,17874..18018,18207..18389,18498..18523)
location: region:9938-18523:1
so has part: feature:9938-10028:1:exon
so has part: feature:10137-10529:1:exon
so has part: feature:10678-10852:1:exon
so has part: feature:11004-11131:1:exon
so has part: feature:13153-13596:1:exon
so has part: feature:14089-14886:1:exon
so has part: feature:16654-16761:1:exon
so has part: feature:16915-17073:1:exon
so has part: feature:17494-17576:1:exon
so has part: feature:17874-18018:1:exon
so has part: feature:18207-18389:1:exon
so has part: feature:18498-18523:1:exon

XP_038024007.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:9938-10028:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:10137-10529:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:10678-10852:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:11004-11131:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:13153-13596:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:14089-14886:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:16654-16761:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:16915-17073:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:17494-17576:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:17874-18018:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:18207-18389:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:18498-18523:1:exon

HAPLN2
type: Gene
subclass of: SO_0000704
RO_0002162: 8839
gene: HAPLN2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(19492..23437)
location: region:19492-23437:-1
so has part: feature:19492-23437:-1:exon
subclass of: SO_0000010

101798775
type: Gene
SIO_000068: ncbigene

position:19492:-1
position: 19492
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:23437:-1
position: 23437
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:19492-23437:-1:exon

HAPLN2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8839
gene: HAPLN2
product: hyaluronan and proteoglycan link protein 2, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 11 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_038168042.1
SIO_010081: HAPLN2
subclass of: SO_0000673
so part of: HAPLN2
location: complement(join(19492..20182,20281..20466,20629..20745,20942..21292,21467..21687,23315..23437))
location: region:19492-23437:-1
so has part: feature:23315-23437:-1:exon
so has part: feature:21467-21687:-1:exon
so has part: feature:20942-21292:-1:exon
so has part: feature:20629-20745:-1:exon
so has part: feature:20281-20466:-1:exon
so has part: feature:19492-20182:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:23315-23437:-1:exon

position:23315:-1
position: 23315
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:21467-21687:-1:exon

position:21467:-1
position: 21467
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:21687:-1
position: 21687
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:20942-21292:-1:exon

position:20942:-1
position: 20942
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:21292:-1
position: 21292
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:20629-20745:-1:exon

position:20629:-1
position: 20629
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:20745:-1
position: 20745
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:20281-20466:-1:exon

position:20281:-1
position: 20281
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:20466:-1
position: 20466
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:19492-20182:-1:exon

position:20182:-1
position: 20182
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

HAPLN2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8839
gene: HAPLN2
product: hyaluronan and proteoglycan link protein 2, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 11 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 7 samples with support for all annotated introns
transcript id: XM_027444510.2
SIO_010081: HAPLN2
subclass of: SO_0000673
so part of: HAPLN2
location: complement(join(19492..20182,20281..20466,20629..20745,20942..21292,21467..21687,21894..23166))
location: region:19492-23166:-1
so has part: feature:21894-23166:-1:exon
so has part: feature:21467-21687:-1:exon
so has part: feature:20942-21292:-1:exon
so has part: feature:20629-20745:-1:exon
so has part: feature:20281-20466:-1:exon
so has part: feature:19492-20182:-1:exon

position:23166:-1
position: 23166
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:21894-23166:-1:exon

position:21894:-1
position: 21894
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:21467-21687:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:20942-21292:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:20629-20745:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:20281-20466:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:19492-20182:-1:exon

HAPLN2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8839
gene: HAPLN2
product: hyaluronan and proteoglycan link protein 2, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 11 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 7 samples with support for all annotated introns
transcript id: XM_027444509.2
SIO_010081: HAPLN2
subclass of: SO_0000673
so part of: HAPLN2
location: complement(join(19492..20182,20281..20466,20629..20745,20942..21292,21467..21687,21773..23166))
location: region:19492-23166:-1
so has part: feature:21773-23166:-1:exon
so has part: feature:21467-21687:-1:exon
so has part: feature:20942-21292:-1:exon
so has part: feature:20629-20745:-1:exon
so has part: feature:20281-20466:-1:exon
so has part: feature:19492-20182:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:21773-23166:-1:exon

position:21773:-1
position: 21773
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:21467-21687:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:20942-21292:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:20629-20745:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:20281-20466:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:19492-20182:-1:exon

HAPLN2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8839
gene: HAPLN2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: hyaluronan and proteoglycan link protein 2
translation: MAADVPTASPGPQRGRGPSRCTSLSPTLLPGTLLPPAPKMLRLLLLSSLWLLAASPTSSTFQRPTGSPAAPRLQYLLEPLHGAVHTQRGATATLPCVLRALPRNYRVKWSKVEPANYGESVIIITNGLSHKNYGPLSPRVRLRHSHRYDASLTITDVALEDEGRYRCQLVNGLEDESVSLTLHLEGVVFPYQPSNGRYKFNYHEAKRACEQQDARLATYQQLYKAWTEGLDWCNAGWVLDGTVHYPIINSREPCGGRLLLPGVRTYGARDKQRDRFDAFCFTSALQGEVYFIRGHLSFKEAGQACRNHGATVAKVGQLYAAWKFSGLDRCDGGWLADGSVRYPITAPRQRCGGVPEPGVRSFGFPSKEQRTYGTYCFAGA
SIO_010081: HAPLN2
subclass of: SO_0000673
so part of: HAPLN2
location: complement(join(19899..20182,20281..20466,20629..20745,20942..21292,21467..21671))
location: region:19899-21671:-1
so has part: feature:21467-21671:-1:exon
so has part: feature:20942-21292:-1:exon
so has part: feature:20629-20745:-1:exon
so has part: feature:20281-20466:-1:exon
so has part: feature:19899-20182:-1:exon

XP_027300310.2
type: Protein
SIO_000068: ncbiprotein

position:19899:-1
position: 19899
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:21671:-1
position: 21671
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:21467-21671:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:20942-21292:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:20629-20745:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:20281-20466:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:19899-20182:-1:exon

HAPLN2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8839
gene: HAPLN2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: hyaluronan and proteoglycan link protein 2
translation: MAADVPTASPGPQRGRGPSRCTSLSPTLLPGTLLPPAPKMLRLLLLSSLWLLAASPTSSTFQRPTGSPAAPRLQYLLEPLHGAVHTQRGATATLPCVLRALPRNYRVKWSKVEPANYGESVIIITNGLSHKNYGPLSPRVRLRHSHRYDASLTITDVALEDEGRYRCQLVNGLEDESVSLTLHLEGVVFPYQPSNGRYKFNYHEAKRACEQQDARLATYQQLYKAWTEGLDWCNAGWVLDGTVHYPIINSREPCGGRLLLPGVRTYGARDKQRDRFDAFCFTSALQGEVYFIRGHLSFKEAGQACRNHGATVAKVGQLYAAWKFSGLDRCDGGWLADGSVRYPITAPRQRCGGVPEPGVRSFGFPSKEQRTYGTYCFAGA
SIO_010081: HAPLN2
subclass of: SO_0000673
so part of: HAPLN2
location: complement(join(19899..20182,20281..20466,20629..20745,20942..21292,21467..21671))
location: region:19899-21671:-1
so has part: feature:21467-21671:-1:exon
so has part: feature:20942-21292:-1:exon
so has part: feature:20629-20745:-1:exon
so has part: feature:20281-20466:-1:exon
so has part: feature:19899-20182:-1:exon

XP_027300311.2
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:21467-21671:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:20942-21292:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:20629-20745:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:20281-20466:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:19899-20182:-1:exon

HAPLN2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8839
gene: HAPLN2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: hyaluronan and proteoglycan link protein 2
translation: MAADVPTASPGPQRGRGPSRCTSLSPTLLPGTLLPPAPKMLRLLLLSSLWLLAASPTSSTFQRPTGSPAAPRLQYLLEPLHGAVHTQRGATATLPCVLRALPRNYRVKWSKVEPANYGESVIIITNGLSHKNYGPLSPRVRLRHSHRYDASLTITDVALEDEGRYRCQLVNGLEDESVSLTLHLEGVVFPYQPSNGRYKFNYHEAKRACEQQDARLATYQQLYKAWTEGLDWCNAGWVLDGTVHYPIINSREPCGGRLLLPGVRTYGARDKQRDRFDAFCFTSALQGEVYFIRGHLSFKEAGQACRNHGATVAKVGQLYAAWKFSGLDRCDGGWLADGSVRYPITAPRQRCGGVPEPGVRSFGFPSKEQRTYGTYCFAGA
SIO_010081: HAPLN2
subclass of: SO_0000673
so part of: HAPLN2
location: complement(join(19899..20182,20281..20466,20629..20745,20942..21292,21467..21671))
location: region:19899-21671:-1
so has part: feature:21467-21671:-1:exon
so has part: feature:20942-21292:-1:exon
so has part: feature:20629-20745:-1:exon
so has part: feature:20281-20466:-1:exon
so has part: feature:19899-20182:-1:exon

XP_038023970.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:21467-21671:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:20942-21292:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:20629-20745:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:20281-20466:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:19899-20182:-1:exon

RHBG
type: Gene
subclass of: SO_0000704
RO_0002162: 8839
gene: RHBG
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 23303..28643
location: region:23303-28643:1
so has part: feature:23303-28643:1:exon
subclass of: SO_0000010

101798930
type: Gene
SIO_000068: ncbigene

position:23303:1
position: 23303
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:28643:1
position: 28643
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:23303-28643:1:exon

RHBG
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8839
gene: RHBG
product: Rh family B glycoprotein
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 93 samples with support for all annotated introns
transcript id: XM_027444508.2
SIO_010081: RHBG
subclass of: SO_0000673
so part of: RHBG
location: join(23303..23713,24824..25010,25728..25878,25969..26116,26356..26522,26684..26821,26972..27105,27218..27339,27498..27571,28168..28643)
location: region:23303-28643:1
so has part: feature:23303-23713:1:exon
so has part: feature:24824-25010:1:exon
so has part: feature:25728-25878:1:exon
so has part: feature:25969-26116:1:exon
so has part: feature:26356-26522:1:exon
so has part: feature:26684-26821:1:exon
so has part: feature:26972-27105:1:exon
so has part: feature:27218-27339:1:exon
so has part: feature:27498-27571:1:exon
so has part: feature:28168-28643:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:23303-23713:1:exon

position:23713:1
position: 23713
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:24824-25010:1:exon

position:24824:1
position: 24824
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:25010:1
position: 25010
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:25728-25878:1:exon

position:25728:1
position: 25728
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:25878:1
position: 25878
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:25969-26116:1:exon

position:25969:1
position: 25969
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:26116:1
position: 26116
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:26356-26522:1:exon

position:26356:1
position: 26356
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:26522:1
position: 26522
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:26684-26821:1:exon

position:26684:1
position: 26684
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:26821:1
position: 26821
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:26972-27105:1:exon

position:26972:1
position: 26972
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:27105:1
position: 27105
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:27218-27339:1:exon

position:27218:1
position: 27218
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:27339:1
position: 27339
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:27498-27571:1:exon

position:27498:1
position: 27498
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:27571:1
position: 27571
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:28168-28643:1:exon

position:28168:1
position: 28168
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

RHBG
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8839
gene: RHBG
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: ammonium transporter Rh type B
translation: MAEGAAASSRLRLAGLCFFLQLLTIILFAAFVRYGPESDPGLCSPQSNCSRRDPEPGSGYPRFRDAHLQALLGFGFLLAFLGRYGPGRVATSLLVVAFALQWALLAQGLFYFSPKGKIYVGAQSMVSADFCTAAVLISSGAVLGRVNPIQLLLMTLLEVPLFACNEFILLSLLGISDSGGSLTVHAFGAYFGLMVSRALRQPRVDEGGEQQDAGRQPDAFTVLGTLYLWIFWPSFASATTAQDGAEPWAVLNIYFSMAASTLAAFVLSPILYEEGTLQAAQLQDAALVGAAVMGMAGEMLLTPFGALVAGFLASHLSLLGSRFLSPILSSRLKIQDTCGVHNVHGLPGVLGTLVGTLLAGLATADAYGGRMESVFPLVAQGSRTASGQAWWQLCALPLTLILASLGGSLTGALLRIRALRSTPKSPEMENKVLREVPEDGLNPEASDEELGGSTLA
SIO_010081: RHBG
subclass of: SO_0000673
so part of: RHBG
location: join(23530..23713,24824..25010,25728..25878,25969..26116,26356..26522,26684..26821,26972..27105,27218..27339,27498..27571,28168..28233)
location: region:23530-28233:1
so has part: feature:23530-23713:1:exon
so has part: feature:24824-25010:1:exon
so has part: feature:25728-25878:1:exon
so has part: feature:25969-26116:1:exon
so has part: feature:26356-26522:1:exon
so has part: feature:26684-26821:1:exon
so has part: feature:26972-27105:1:exon
so has part: feature:27218-27339:1:exon
so has part: feature:27498-27571:1:exon
so has part: feature:28168-28233:1:exon

XP_027300309.2
type: Protein
SIO_000068: ncbiprotein

position:23530:1
position: 23530
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:28233:1
position: 28233
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:23530-23713:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:24824-25010:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:25728-25878:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:25969-26116:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:26356-26522:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:26684-26821:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:26972-27105:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:27218-27339:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:27498-27571:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:28168-28233:1:exon

LOC110353098
type: Gene
subclass of: SO_0000704
RO_0002162: 8839
gene: LOC110353098
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(58327..86397)
location: region:58327-86397:-1
so has part: feature:58327-86397:-1:exon
subclass of: SO_0000010

110353098
type: Gene
SIO_000068: ncbigene

position:58327:-1
position: 58327
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:86397:-1
position: 86397
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:58327-86397:-1:exon

LOC110353098
type: Miscellaneous RNA
subclass of: SO_0000673
RO_0002162: 8839
gene: LOC110353098
product: uncharacterized LOC110353098, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 8 samples with support for all annotated introns
transcript id: XR_005261003.1
SIO_010081: LOC110353098
so part of: LOC110353098
location: complement(join(58327..58726,64555..64847,65199..65296,76937..77089))
location: region:58327-77089:-1
so has part: feature:76937-77089:-1:exon
so has part: feature:65199-65296:-1:exon
so has part: feature:64555-64847:-1:exon
so has part: feature:58327-58726:-1:exon

position:77089:-1
position: 77089
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:76937-77089:-1:exon

position:76937:-1
position: 76937
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:65199-65296:-1:exon

position:65199:-1
position: 65199
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:65296:-1
position: 65296
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:64555-64847:-1:exon

position:64555:-1
position: 64555
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:64847:-1
position: 64847
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:58327-58726:-1:exon

position:58726:-1
position: 58726
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC110353098
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8839
gene: LOC110353098
product: uncharacterized LOC110353098, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 6 samples with support for all annotated introns
transcript id: XM_038168039.1
SIO_010081: LOC110353098
subclass of: SO_0000673
so part of: LOC110353098
location: complement(join(60263..64847,65199..65296,86249..86397))
location: region:60263-86397:-1
so has part: feature:86249-86397:-1:exon
so has part: feature:65199-65296:-1:exon
so has part: feature:60263-64847:-1:exon

position:60263:-1
position: 60263
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:86249-86397:-1:exon

position:86249:-1
position: 86249
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:65199-65296:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:60263-64847:-1:exon

LOC110353098
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8839
gene: LOC110353098
product: uncharacterized LOC110353098, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 12 samples with support for all annotated introns
transcript id: XM_038168038.1
SIO_010081: LOC110353098
subclass of: SO_0000673
so part of: LOC110353098
location: complement(join(60263..64847,65199..65296,78420..78815))
location: region:60263-78815:-1
so has part: feature:78420-78815:-1:exon
so has part: feature:65199-65296:-1:exon
so has part: feature:60263-64847:-1:exon

position:78815:-1
position: 78815
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:78420-78815:-1:exon

position:78420:-1
position: 78420
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:65199-65296:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:60263-64847:-1:exon

LOC110353098
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8839
gene: LOC110353098
product: uncharacterized LOC110353098, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 7 samples with support for all annotated introns
transcript id: XM_038168037.1
SIO_010081: LOC110353098
subclass of: SO_0000673
so part of: LOC110353098
location: complement(join(60263..63736,64555..64847,65199..65296,76937..77090))
location: region:60263-77090:-1
so has part: feature:76937-77090:-1:exon
so has part: feature:65199-65296:-1:exon
so has part: feature:64555-64847:-1:exon
so has part: feature:60263-63736:-1:exon

position:77090:-1
position: 77090
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:76937-77090:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:65199-65296:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:64555-64847:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:60263-63736:-1:exon

position:63736:-1
position: 63736
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC110353098
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8839
gene: LOC110353098
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: uncharacterized protein LOC110353098
translation: MLLAAWGAWGAPRVPWGAVCVRPQPSPGRSGWEKPCRGTEPLVINAKCSGPGAAGRKWEGKKRPFFQRERAFCSRSWSWCCGQAWNRGSGRSGRFLGQEAGLLRGEASVLQVGTGLGLSPQTQRPWVPQHPSSTSLPTAPSERGDFGNGERWERQHPRPPFCGRRVIYDMRGGAIVWNPSCIFSEGFASLPSPPLCRCYCTVAMGRAPRAAAMRGSAGEGRAPRPDPSGAPQPRCRQHPRAAPLTCRGPGNGAFGPSKFTATGGIQLPGGQRDPGRLAPFSLPLRLSAVAVSSAHTDPPVPFSS
SIO_010081: LOC110353098
subclass of: SO_0000673
so part of: LOC110353098
location: complement(62211..63125)
location: region:62211-63125:-1
so has part: feature:62211-63125:-1:exon

XP_038023965.1
type: Protein
SIO_000068: ncbiprotein

position:62211:-1
position: 62211
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:63125:-1
position: 63125
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:62211-63125:-1:exon

LOC110353098
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8839
gene: LOC110353098
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: uncharacterized protein LOC110353098
translation: MLLAAWGAWGAPRVPWGAVCVRPQPSPGRSGWEKPCRGTEPLVINAKCSGPGAAGRKWEGKKRPFFQRERAFCSRSWSWCCGQAWNRGSGRSGRFLGQEAGLLRGEASVLQVGTGLGLSPQTQRPWVPQHPSSTSLPTAPSERGDFGNGERWERQHPRPPFCGRRVIYDMRGGAIVWNPSCIFSEGFASLPSPPLCRCYCTVAMGRAPRAAAMRGSAGEGRAPRPDPSGAPQPRCRQHPRAAPLTCRGPGNGAFGPSKFTATGGIQLPGGQRDPGRLAPFSLPLRLSAVAVSSAHTDPPVPFSS
SIO_010081: LOC110353098
subclass of: SO_0000673
so part of: LOC110353098
location: complement(62211..63125)
location: region:62211-63125:-1
so has part: feature:62211-63125:-1:exon

XP_038023966.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:62211-63125:-1:exon

LOC110353098
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8839
gene: LOC110353098
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: uncharacterized protein LOC110353098
translation: MLLAAWGAWGAPRVPWGAVCVRPQPSPGRSGWEKPCRGTEPLVINAKCSGPGAAGRKWEGKKRPFFQRERAFCSRSWSWCCGQAWNRGSGRSGRFLGQEAGLLRGEASVLQVGTGLGLSPQTQRPWVPQHPSSTSLPTAPSERGDFGNGERWERQHPRPPFCGRRVIYDMRGGAIVWNPSCIFSEGFASLPSPPLCRCYCTVAMGRAPRAAAMRGSAGEGRAPRPDPSGAPQPRCRQHPRAAPLTCRGPGNGAFGPSKFTATGGIQLPGGQRDPGRLAPFSLPLRLSAVAVSSAHTDPPVPFSS
SIO_010081: LOC110353098
subclass of: SO_0000673
so part of: LOC110353098
location: complement(62211..63125)
location: region:62211-63125:-1
so has part: feature:62211-63125:-1:exon

XP_038023967.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:62211-63125:-1:exon

MEF2D
type: Gene
subclass of: SO_0000704
RO_0002162: 8839
gene: MEF2D
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(97319..153514)
location: region:97319-153514:-1
so has part: feature:97319-153514:-1:exon
subclass of: SO_0000010

101799116
type: Gene
SIO_000068: ncbigene

position:97319:-1
position: 97319
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:153514:-1
position: 153514
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:97319-153514:-1:exon

MEF2D
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8839
gene: MEF2D
product: myocyte enhancer factor 2D
exception: unclassified transcription discrepancy
note: The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: deleted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments, including 111 samples with support for all annotated introns
transcript id: XM_038167813.1
SIO_010081: MEF2D
subclass of: SO_0000673
so part of: MEF2D
location: complement(join(97319..97693,98589..98827,101071..101197,103491..103511,103666..103862,106407..106463,108546..108756,111781..111918,116646..116849,120560..120843,133816..133885,153373..153514))
location: region:97319-153514:-1
so has part: feature:153373-153514:-1:exon
so has part: feature:133816-133885:-1:exon
so has part: feature:120560-120843:-1:exon
so has part: feature:116646-116849:-1:exon
so has part: feature:111781-111918:-1:exon
so has part: feature:108546-108756:-1:exon
so has part: feature:106407-106463:-1:exon
so has part: feature:103666-103862:-1:exon
so has part: feature:103491-103511:-1:exon
so has part: feature:101071-101197:-1:exon
so has part: feature:98589-98827:-1:exon
so has part: feature:97319-97693:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:153373-153514:-1:exon

position:153373:-1
position: 153373
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:133816-133885:-1:exon

position:133816:-1
position: 133816
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:133885:-1
position: 133885
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:120560-120843:-1:exon

position:120560:-1
position: 120560
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:120843:-1
position: 120843
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:116646-116849:-1:exon

position:116646:-1
position: 116646
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:116849:-1
position: 116849
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:111781-111918:-1:exon

position:111781:-1
position: 111781
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:111918:-1
position: 111918
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:108546-108756:-1:exon

position:108546:-1
position: 108546
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:108756:-1
position: 108756
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:106407-106463:-1:exon

position:106407:-1
position: 106407
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:106463:-1
position: 106463
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:103666-103862:-1:exon

position:103666:-1
position: 103666
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:103862:-1
position: 103862
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:103491-103511:-1:exon

position:103491:-1
position: 103491
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:103511:-1
position: 103511
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:101071-101197:-1:exon

position:101071:-1
position: 101071
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:101197:-1
position: 101197
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:98589-98827:-1:exon

position:98589:-1
position: 98589
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:98827:-1
position: 98827
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:97319-97693:-1:exon

position:97693:-1
position: 97693
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

MEF2D
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8839
gene: MEF2D
exception: unclassified translation discrepancy
note: The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: deleted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: LOW QUALITY PROTEIN: myocyte-specific enhancer factor 2D
translation: MGRKKIQIQRITDERNRQVTFTKRKFGLMKKAYELSVLCDCEIALIIFNHSNKLFQYASTDMDKVLLKYTEYNEPHESRTNADIIETLRKKGFNGCDSPEPDGDDSIDQSPLMEDKYRKGSEDLDILFKRYGSAVPAPNFAMPVTVPVTNQSTLQFSNPGSSLVTQSLVTSSLTDPRLLSPQQPALQRNTVSPGLPQRPASAGAMLGGDLNTTNGACPSPVGNGYVSARASPGLLPVSNGSTLGKIIPAKSPPPPPPSHGAQLAANSRKPDLRVITSQSGKGLMHHLTEDHLALNTQRLGVSQATHSLTTPVVSVATPSLLTQGLPFSAMPTAYNTDYQLTSAELSSLPAFSSPGGLSLGNISAWQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQHLVPVSLGNLIQGSHLSHTTTLTVNTNPNISIKSEPVSPNRERNTATPLSTFPHQPRHEPTGRSPVDSLSSNTSSYEGSSERDDPARADFGSSLGLLRPGSEPEGESPSVKRMRLDTWVT
SIO_010081: MEF2D
subclass of: SO_0000673
so part of: MEF2D
location: complement(join(97363..97693,98589..98827,101071..101197,103491..103511,103666..103862,106407..106463,108546..108756,111781..111918,116646..116849,120560..120613))
location: region:97363-120613:-1
so has part: feature:120560-120613:-1:exon
so has part: feature:116646-116849:-1:exon
so has part: feature:111781-111918:-1:exon
so has part: feature:108546-108756:-1:exon
so has part: feature:106407-106463:-1:exon
so has part: feature:103666-103862:-1:exon
so has part: feature:103491-103511:-1:exon
so has part: feature:101071-101197:-1:exon
so has part: feature:98589-98827:-1:exon
so has part: feature:97363-97693:-1:exon

XP_038023741.1
type: Protein
SIO_000068: ncbiprotein

position:97363:-1
position: 97363
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:120613:-1
position: 120613
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:120560-120613:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:116646-116849:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:111781-111918:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:108546-108756:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:106407-106463:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:103666-103862:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:103491-103511:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:101071-101197:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:98589-98827:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:97363-97693:-1:exon

IQGAP3
type: Gene
subclass of: SO_0000704
RO_0002162: 8839
gene: IQGAP3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(169872..182692)
location: region:169872-182692:-1
so has part: feature:169872-182692:-1:exon
subclass of: SO_0000010

101799307
type: Gene
SIO_000068: ncbigene

position:169872:-1
position: 169872
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:182692:-1
position: 182692
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:169872-182692:-1:exon

IQGAP3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8839
gene: IQGAP3
product: IQ motif containing GTPase activating protein 3, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 71 samples with support for all annotated introns
transcript id: XM_038168029.1
SIO_010081: IQGAP3
subclass of: SO_0000673
so part of: IQGAP3
location: complement(join(169872..170914,171033..171141,171280..171381,171526..171692,171788..172000,172231..172318,172479..172623,172786..172888,173250..173382,173464..173696,173776..173860,174230..174370,174450..174674,174842..175005,175103..175255,175344..175552,175666..175735,176213..176284,176390..176473,176790..176960,177035..177177,177321..177488,177569..177659,177776..177939,178071..178195,178399..178559,178672..178835,178951..179038,179133..179296,179510..179597,179771..179949,180085..180198,180386..180453,180615..180691,180864..180941,181364..181520,181738..181825,182601..182692))
location: region:169872-182692:-1
so has part: feature:182601-182692:-1:exon
so has part: feature:181738-181825:-1:exon
so has part: feature:181364-181520:-1:exon
so has part: feature:180864-180941:-1:exon
so has part: feature:180615-180691:-1:exon
so has part: feature:180386-180453:-1:exon
so has part: feature:180085-180198:-1:exon
so has part: feature:179771-179949:-1:exon
so has part: feature:179510-179597:-1:exon
so has part: feature:179133-179296:-1:exon
so has part: feature:178951-179038:-1:exon
so has part: feature:178672-178835:-1:exon
so has part: feature:178399-178559:-1:exon
so has part: feature:178071-178195:-1:exon
so has part: feature:177776-177939:-1:exon
so has part: feature:177569-177659:-1:exon
so has part: feature:177321-177488:-1:exon
so has part: feature:177035-177177:-1:exon
so has part: feature:176790-176960:-1:exon
so has part: feature:176390-176473:-1:exon
so has part: feature:176213-176284:-1:exon
so has part: feature:175666-175735:-1:exon
so has part: feature:175344-175552:-1:exon
so has part: feature:175103-175255:-1:exon
so has part: feature:174842-175005:-1:exon
so has part: feature:174450-174674:-1:exon
so has part: feature:174230-174370:-1:exon
so has part: feature:173776-173860:-1:exon
so has part: feature:173464-173696:-1:exon
so has part: feature:173250-173382:-1:exon
so has part: feature:172786-172888:-1:exon
so has part: feature:172479-172623:-1:exon
so has part: feature:172231-172318:-1:exon
so has part: feature:171788-172000:-1:exon
so has part: feature:171526-171692:-1:exon
so has part: feature:171280-171381:-1:exon
so has part: feature:171033-171141:-1:exon
so has part: feature:169872-170914:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:182601-182692:-1:exon

position:182601:-1
position: 182601
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:181738-181825:-1:exon

position:181738:-1
position: 181738
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:181825:-1
position: 181825
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:181364-181520:-1:exon

position:181364:-1
position: 181364
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:181520:-1
position: 181520
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:180864-180941:-1:exon

position:180864:-1
position: 180864
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:180941:-1
position: 180941
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:180615-180691:-1:exon

position:180615:-1
position: 180615
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:180691:-1
position: 180691
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:180386-180453:-1:exon

position:180386:-1
position: 180386
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:180453:-1
position: 180453
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:180085-180198:-1:exon

position:180085:-1
position: 180085
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:180198:-1
position: 180198
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:179771-179949:-1:exon

position:179771:-1
position: 179771
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:179949:-1
position: 179949
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:179510-179597:-1:exon

position:179510:-1
position: 179510
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:179597:-1
position: 179597
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:179133-179296:-1:exon

position:179133:-1
position: 179133
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:179296:-1
position: 179296
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:178951-179038:-1:exon

position:178951:-1
position: 178951
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:179038:-1
position: 179038
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:178672-178835:-1:exon

position:178672:-1
position: 178672
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:178835:-1
position: 178835
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:178399-178559:-1:exon

position:178399:-1
position: 178399
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:178559:-1
position: 178559
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:178071-178195:-1:exon

position:178071:-1
position: 178071
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:178195:-1
position: 178195
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:177776-177939:-1:exon

position:177776:-1
position: 177776
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:177939:-1
position: 177939
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:177569-177659:-1:exon

position:177569:-1
position: 177569
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:177659:-1
position: 177659
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:177321-177488:-1:exon

position:177321:-1
position: 177321
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:177488:-1
position: 177488
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:177035-177177:-1:exon

position:177035:-1
position: 177035
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:177177:-1
position: 177177
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:176790-176960:-1:exon

position:176790:-1
position: 176790
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:176960:-1
position: 176960
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:176390-176473:-1:exon

position:176390:-1
position: 176390
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:176473:-1
position: 176473
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:176213-176284:-1:exon

position:176213:-1
position: 176213
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:176284:-1
position: 176284
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 22
SIO_000628: feature:175666-175735:-1:exon

position:175666:-1
position: 175666
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:175735:-1
position: 175735
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 23
SIO_000628: feature:175344-175552:-1:exon

position:175344:-1
position: 175344
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:175552:-1
position: 175552
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 24
SIO_000628: feature:175103-175255:-1:exon

position:175103:-1
position: 175103
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:175255:-1
position: 175255
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 25
SIO_000628: feature:174842-175005:-1:exon

position:174842:-1
position: 174842
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:175005:-1
position: 175005
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 26
SIO_000628: feature:174450-174674:-1:exon

position:174450:-1
position: 174450
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:174674:-1
position: 174674
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 27
SIO_000628: feature:174230-174370:-1:exon

position:174230:-1
position: 174230
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:174370:-1
position: 174370
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 28
SIO_000628: feature:173776-173860:-1:exon

position:173776:-1
position: 173776
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:173860:-1
position: 173860
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 29
SIO_000628: feature:173464-173696:-1:exon

position:173464:-1
position: 173464
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:173696:-1
position: 173696
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 30
SIO_000628: feature:173250-173382:-1:exon

position:173250:-1
position: 173250
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:173382:-1
position: 173382
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 31
SIO_000628: feature:172786-172888:-1:exon

position:172786:-1
position: 172786
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:172888:-1
position: 172888
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 32
SIO_000628: feature:172479-172623:-1:exon

position:172479:-1
position: 172479
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:172623:-1
position: 172623
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 33
SIO_000628: feature:172231-172318:-1:exon

position:172231:-1
position: 172231
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:172318:-1
position: 172318
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 34
SIO_000628: feature:171788-172000:-1:exon

position:171788:-1
position: 171788
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:172000:-1
position: 172000
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 35
SIO_000628: feature:171526-171692:-1:exon

position:171526:-1
position: 171526
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:171692:-1
position: 171692
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 36
SIO_000628: feature:171280-171381:-1:exon

position:171280:-1
position: 171280
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:171381:-1
position: 171381
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 37
SIO_000628: feature:171033-171141:-1:exon

position:171033:-1
position: 171033
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:171141:-1
position: 171141
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 38
SIO_000628: feature:169872-170914:-1:exon

position:170914:-1
position: 170914
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

IQGAP3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8839
gene: IQGAP3
product: IQ motif containing GTPase activating protein 3, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 13 samples with support for all annotated introns
transcript id: XM_038168028.1
SIO_010081: IQGAP3
subclass of: SO_0000673
so part of: IQGAP3
location: complement(join(169872..170914,171033..171141,171280..171381,171526..171692,171788..172000,172231..172318,172479..172623,172786..172888,173250..173382,173464..173696,173776..173860,174230..174370,174450..174674,174842..175005,175103..175255,175344..175552,175666..175735,176213..176284,176390..176473,176790..176960,177035..177195,177321..177488,177569..177659,177776..177939,178071..178195,178399..178559,178672..178835,178951..179038,179133..179296,179510..179597,179771..179949,180085..180198,180386..180453,180615..180691,180864..180941,181364..181520,181738..181825,182601..182692))
location: region:169872-182692:-1
so has part: feature:182601-182692:-1:exon
so has part: feature:181738-181825:-1:exon
so has part: feature:181364-181520:-1:exon
so has part: feature:180864-180941:-1:exon
so has part: feature:180615-180691:-1:exon
so has part: feature:180386-180453:-1:exon
so has part: feature:180085-180198:-1:exon
so has part: feature:179771-179949:-1:exon
so has part: feature:179510-179597:-1:exon
so has part: feature:179133-179296:-1:exon
so has part: feature:178951-179038:-1:exon
so has part: feature:178672-178835:-1:exon
so has part: feature:178399-178559:-1:exon
so has part: feature:178071-178195:-1:exon
so has part: feature:177776-177939:-1:exon
so has part: feature:177569-177659:-1:exon
so has part: feature:177321-177488:-1:exon
so has part: feature:177035-177195:-1:exon
so has part: feature:176790-176960:-1:exon
so has part: feature:176390-176473:-1:exon
so has part: feature:176213-176284:-1:exon
so has part: feature:175666-175735:-1:exon
so has part: feature:175344-175552:-1:exon
so has part: feature:175103-175255:-1:exon
so has part: feature:174842-175005:-1:exon
so has part: feature:174450-174674:-1:exon
so has part: feature:174230-174370:-1:exon
so has part: feature:173776-173860:-1:exon
so has part: feature:173464-173696:-1:exon
so has part: feature:173250-173382:-1:exon
so has part: feature:172786-172888:-1:exon
so has part: feature:172479-172623:-1:exon
so has part: feature:172231-172318:-1:exon
so has part: feature:171788-172000:-1:exon
so has part: feature:171526-171692:-1:exon
so has part: feature:171280-171381:-1:exon
so has part: feature:171033-171141:-1:exon
so has part: feature:169872-170914:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:182601-182692:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:181738-181825:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:181364-181520:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:180864-180941:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:180615-180691:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:180386-180453:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:180085-180198:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:179771-179949:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:179510-179597:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:179133-179296:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:178951-179038:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:178672-178835:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:178399-178559:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:178071-178195:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:177776-177939:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:177569-177659:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:177321-177488:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:177035-177195:-1:exon

position:177195:-1
position: 177195
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:176790-176960:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:176390-176473:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:176213-176284:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:175666-175735:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:175344-175552:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:175103-175255:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:174842-175005:-1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:174450-174674:-1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:174230-174370:-1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:173776-173860:-1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:173464-173696:-1:exon

urn:…
SIO_000300: 30
SIO_000628: feature:173250-173382:-1:exon

urn:…
SIO_000300: 31
SIO_000628: feature:172786-172888:-1:exon

urn:…
SIO_000300: 32
SIO_000628: feature:172479-172623:-1:exon

urn:…
SIO_000300: 33
SIO_000628: feature:172231-172318:-1:exon

urn:…
SIO_000300: 34
SIO_000628: feature:171788-172000:-1:exon

urn:…
SIO_000300: 35
SIO_000628: feature:171526-171692:-1:exon

urn:…
SIO_000300: 36
SIO_000628: feature:171280-171381:-1:exon

urn:…
SIO_000300: 37
SIO_000628: feature:171033-171141:-1:exon

urn:…
SIO_000300: 38
SIO_000628: feature:169872-170914:-1:exon

IQGAP3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8839
gene: IQGAP3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: ras GTPase-activating-like protein IQGAP3 isoform X2
translation: MEGAGPEPIRNERLTADEMDERRRQNVAYQYLCRLEEAKRWMEACLGEELPPPTELEESLRNGVLLAKLGHCFAPDVVPAKKIYDRDQTRYKASGLHFRHTDNINHWRDAMSRVGLPSLFHPETTDIYDKKNMPRVVYCIHALSLYLFKLGLAPQIQDLYGKVNFTEEEINNMQRELDKYGLQLPAFSKIGGILANELSVDEAAVHAAVLAINEAVEQGVAAQTMEALLNPNAMLLNLRPVFSGAYQEVLHRAKREKGSNARNRHLRAIPDGEDIYDRCLTQAEIQGNINKANVQGALEDVDDALESQDALALYRALQDPVLALRHLRRDNLDRYLEQLGADRQQKALELGYVELLEQEEVAAGIAAANEKGEEERAMLQAVSRINAAIRRGAPDKTLEALMEPAAQLPTVHPLAAPLYQHQLALLQRQHPRGELVQEELFVAVEMLSAVALVNRALDAGDPDGLWSSLVSPALGLSDVEDGNAQRYFDDLLQLKGQFREAGAEFLTWNDVQDCVNATNSAVQDENDRVLAVRLINEALLQADPQKTLAALLLPAAALPGVTAAAARRYHHVLTRARVLKAQATKDDRAVLWWEEIQSGVCGANEDGVAARRMALGTAAINQAIKEGKAAQTLRVLRNPDVALRGVVDACAAAYQEQLAALAATKRQAGNTKPLWVQHRLQDGAEYFLSLQTFEGSWEKPRDGELCTTHLSREEIQSVITQVTSAHDRERLWASHVPFVVRLQARLRGFLVRQQLAARWRVLREEQPAALRIQAWWRGQKQRRAYLERLRYLRAHADAAVKIQAGVRMWQARRRYQERLRYFRRNVKAVIKIQAFVRANKARGDYRMLVHARSPPLSIVRRFIHLLEQSQQDFWEEAEVLRLREEVVKRIRASQQLESDLDLMDIKIGLLVKNRITLQEVVSHCKKLTKKNKEQLSEMMSLDKQKGLKALSKEKRQKLEAYQHLFYLLQTQPGYLARLIFQMPQNKSTKFMESVIFTLYNYASNPREAYLLLQLFKAALQEEIRSKVDHIHDILTGNATVIRLVVSFYRNARGQNALRQILGGPVQEVLQDKTLSIRTDPVDIYKAWVNQMESQSGQKSKLPYEVSPEQALSHPEVQRRLDISVRNLLVTTDKFVSAITSSVDKIPYGMRYVAKILRTSLAEKFPRASEEEVDKVVGNLLYYRFMNPAVVAPDGFDIVDISAGATLHPEQRRSLGSVAKVLQHAAARKVFEGENSHLCGVNRYLEDTHAKFRRFIAAACRVPEPEERFNVDEYSELVAVAKPVIYITIGELIDTHKLLLEHQDSIAPHHGDPLHELLEDLDELPTVQSLVGESAPSPAESSAEAVLAQLSKMEISLTLTGKPLLEADSEESDARSLLLSTKQMLVDVIQSQPGESLPEILRTPASDLEEASHEHLMRRRALRDAQTPEKLKRNRSLAANSQLSVEEKKRKIIRNLRRLESLGLVDSAHQYQGLVNELAKDIRNQRRYRQHRKGELLKLRQTLQGLDSKTLFYEEQIDYYNQYIRTCLDNLAASNRASGKSKKLQPLRYTAARLLEKGVLLEIEELPVSQFKNVIFDIVPCEEAGRFQVKAKFMGIDMERFQLHYQDLLQLQYEGVAVMKMFDKAKVNVNLLIFLLNKKFFKK
SIO_010081: IQGAP3
subclass of: SO_0000673
so part of: IQGAP3
location: complement(join(170801..170914,171033..171141,171280..171381,171526..171692,171788..172000,172231..172318,172479..172623,172786..172888,173250..173382,173464..173696,173776..173860,174230..174370,174450..174674,174842..175005,175103..175255,175344..175552,175666..175735,176213..176284,176390..176473,176790..176960,177035..177177,177321..177488,177569..177659,177776..177939,178071..178195,178399..178559,178672..178835,178951..179038,179133..179296,179510..179597,179771..179949,180085..180198,180386..180453,180615..180691,180864..180941,181364..181520,181738..181825,182601..182631))
location: region:170801-182631:-1
so has part: feature:182601-182631:-1:exon
so has part: feature:181738-181825:-1:exon
so has part: feature:181364-181520:-1:exon
so has part: feature:180864-180941:-1:exon
so has part: feature:180615-180691:-1:exon
so has part: feature:180386-180453:-1:exon
so has part: feature:180085-180198:-1:exon
so has part: feature:179771-179949:-1:exon
so has part: feature:179510-179597:-1:exon
so has part: feature:179133-179296:-1:exon
so has part: feature:178951-179038:-1:exon
so has part: feature:178672-178835:-1:exon
so has part: feature:178399-178559:-1:exon
so has part: feature:178071-178195:-1:exon
so has part: feature:177776-177939:-1:exon
so has part: feature:177569-177659:-1:exon
so has part: feature:177321-177488:-1:exon
so has part: feature:177035-177177:-1:exon
so has part: feature:176790-176960:-1:exon
so has part: feature:176390-176473:-1:exon
so has part: feature:176213-176284:-1:exon
so has part: feature:175666-175735:-1:exon
so has part: feature:175344-175552:-1:exon
so has part: feature:175103-175255:-1:exon
so has part: feature:174842-175005:-1:exon
so has part: feature:174450-174674:-1:exon
so has part: feature:174230-174370:-1:exon
so has part: feature:173776-173860:-1:exon
so has part: feature:173464-173696:-1:exon
so has part: feature:173250-173382:-1:exon
so has part: feature:172786-172888:-1:exon
so has part: feature:172479-172623:-1:exon
so has part: feature:172231-172318:-1:exon
so has part: feature:171788-172000:-1:exon
so has part: feature:171526-171692:-1:exon
so has part: feature:171280-171381:-1:exon
so has part: feature:171033-171141:-1:exon
so has part: feature:170801-170914:-1:exon

XP_038023957.1
type: Protein
SIO_000068: ncbiprotein

position:170801:-1
position: 170801
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:182631:-1
position: 182631
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:182601-182631:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:181738-181825:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:181364-181520:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:180864-180941:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:180615-180691:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:180386-180453:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:180085-180198:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:179771-179949:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:179510-179597:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:179133-179296:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:178951-179038:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:178672-178835:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:178399-178559:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:178071-178195:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:177776-177939:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:177569-177659:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:177321-177488:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:177035-177177:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:176790-176960:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:176390-176473:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:176213-176284:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:175666-175735:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:175344-175552:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:175103-175255:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:174842-175005:-1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:174450-174674:-1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:174230-174370:-1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:173776-173860:-1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:173464-173696:-1:exon

urn:…
SIO_000300: 30
SIO_000628: feature:173250-173382:-1:exon

urn:…
SIO_000300: 31
SIO_000628: feature:172786-172888:-1:exon

urn:…
SIO_000300: 32
SIO_000628: feature:172479-172623:-1:exon

urn:…
SIO_000300: 33
SIO_000628: feature:172231-172318:-1:exon

urn:…
SIO_000300: 34
SIO_000628: feature:171788-172000:-1:exon

urn:…
SIO_000300: 35
SIO_000628: feature:171526-171692:-1:exon

urn:…
SIO_000300: 36
SIO_000628: feature:171280-171381:-1:exon

urn:…
SIO_000300: 37
SIO_000628: feature:171033-171141:-1:exon

urn:…
SIO_000300: 38
SIO_000628: feature:170801-170914:-1:exon

IQGAP3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8839
gene: IQGAP3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: ras GTPase-activating-like protein IQGAP3 isoform X1
translation: MEGAGPEPIRNERLTADEMDERRRQNVAYQYLCRLEEAKRWMEACLGEELPPPTELEESLRNGVLLAKLGHCFAPDVVPAKKIYDRDQTRYKASGLHFRHTDNINHWRDAMSRVGLPSLFHPETTDIYDKKNMPRVVYCIHALSLYLFKLGLAPQIQDLYGKVNFTEEEINNMQRELDKYGLQLPAFSKIGGILANELSVDEAAVHAAVLAINEAVEQGVAAQTMEALLNPNAMLLNLRPVFSGAYQEVLHRAKREKGSNARNRHLRAIPDGEDIYDRCLTQAEIQGNINKANVQGALEDVDDALESQDALALYRALQDPVLALRHLRRDNLDRYLEQLGADRQQKALELGYVELLEQEEVAAGIAAANEKGEEERAMLQAVSRINAAIRRGAPDKTLEALMEPAAQLPTVHPLAAPLYQHQLALLQRQHPRGELVQEELFVAVEMLSAVALVNRALDAGDPDGLWSSLVSPALGLSDVEDGNAQRYFDDLLQLKGQFREAGAEFLTWNDVQDCVNATNSAVQDENDRVLAVRLINEALLQADPQKTLAALLLPAAALPGVTAAAARRYHHVLTRARVLKAQATKDDRAVLWWEEIQSGVCGANEDGVAARRMALGTAAINQAIKEGKAAQTLRVLRNPDVALRGVVDACAAAYQEQLAALAATKRQAALHRCAGNTKPLWVQHRLQDGAEYFLSLQTFEGSWEKPRDGELCTTHLSREEIQSVITQVTSAHDRERLWASHVPFVVRLQARLRGFLVRQQLAARWRVLREEQPAALRIQAWWRGQKQRRAYLERLRYLRAHADAAVKIQAGVRMWQARRRYQERLRYFRRNVKAVIKIQAFVRANKARGDYRMLVHARSPPLSIVRRFIHLLEQSQQDFWEEAEVLRLREEVVKRIRASQQLESDLDLMDIKIGLLVKNRITLQEVVSHCKKLTKKNKEQLSEMMSLDKQKGLKALSKEKRQKLEAYQHLFYLLQTQPGYLARLIFQMPQNKSTKFMESVIFTLYNYASNPREAYLLLQLFKAALQEEIRSKVDHIHDILTGNATVIRLVVSFYRNARGQNALRQILGGPVQEVLQDKTLSIRTDPVDIYKAWVNQMESQSGQKSKLPYEVSPEQALSHPEVQRRLDISVRNLLVTTDKFVSAITSSVDKIPYGMRYVAKILRTSLAEKFPRASEEEVDKVVGNLLYYRFMNPAVVAPDGFDIVDISAGATLHPEQRRSLGSVAKVLQHAAARKVFEGENSHLCGVNRYLEDTHAKFRRFIAAACRVPEPEERFNVDEYSELVAVAKPVIYITIGELIDTHKLLLEHQDSIAPHHGDPLHELLEDLDELPTVQSLVGESAPSPAESSAEAVLAQLSKMEISLTLTGKPLLEADSEESDARSLLLSTKQMLVDVIQSQPGESLPEILRTPASDLEEASHEHLMRRRALRDAQTPEKLKRNRSLAANSQLSVEEKKRKIIRNLRRLESLGLVDSAHQYQGLVNELAKDIRNQRRYRQHRKGELLKLRQTLQGLDSKTLFYEEQIDYYNQYIRTCLDNLAASNRASGKSKKLQPLRYTAARLLEKGVLLEIEELPVSQFKNVIFDIVPCEEAGRFQVKAKFMGIDMERFQLHYQDLLQLQYEGVAVMKMFDKAKVNVNLLIFLLNKKFFKK
SIO_010081: IQGAP3
subclass of: SO_0000673
so part of: IQGAP3
location: complement(join(170801..170914,171033..171141,171280..171381,171526..171692,171788..172000,172231..172318,172479..172623,172786..172888,173250..173382,173464..173696,173776..173860,174230..174370,174450..174674,174842..175005,175103..175255,175344..175552,175666..175735,176213..176284,176390..176473,176790..176960,177035..177195,177321..177488,177569..177659,177776..177939,178071..178195,178399..178559,178672..178835,178951..179038,179133..179296,179510..179597,179771..179949,180085..180198,180386..180453,180615..180691,180864..180941,181364..181520,181738..181825,182601..182631))
location: region:170801-182631:-1
so has part: feature:182601-182631:-1:exon
so has part: feature:181738-181825:-1:exon
so has part: feature:181364-181520:-1:exon
so has part: feature:180864-180941:-1:exon
so has part: feature:180615-180691:-1:exon
so has part: feature:180386-180453:-1:exon
so has part: feature:180085-180198:-1:exon
so has part: feature:179771-179949:-1:exon
so has part: feature:179510-179597:-1:exon
so has part: feature:179133-179296:-1:exon
so has part: feature:178951-179038:-1:exon
so has part: feature:178672-178835:-1:exon
so has part: feature:178399-178559:-1:exon
so has part: feature:178071-178195:-1:exon
so has part: feature:177776-177939:-1:exon
so has part: feature:177569-177659:-1:exon
so has part: feature:177321-177488:-1:exon
so has part: feature:177035-177195:-1:exon
so has part: feature:176790-176960:-1:exon
so has part: feature:176390-176473:-1:exon
so has part: feature:176213-176284:-1:exon
so has part: feature:175666-175735:-1:exon
so has part: feature:175344-175552:-1:exon
so has part: feature:175103-175255:-1:exon
so has part: feature:174842-175005:-1:exon
so has part: feature:174450-174674:-1:exon
so has part: feature:174230-174370:-1:exon
so has part: feature:173776-173860:-1:exon
so has part: feature:173464-173696:-1:exon
so has part: feature:173250-173382:-1:exon
so has part: feature:172786-172888:-1:exon
so has part: feature:172479-172623:-1:exon
so has part: feature:172231-172318:-1:exon
so has part: feature:171788-172000:-1:exon
so has part: feature:171526-171692:-1:exon
so has part: feature:171280-171381:-1:exon
so has part: feature:171033-171141:-1:exon
so has part: feature:170801-170914:-1:exon

XP_038023956.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:182601-182631:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:181738-181825:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:181364-181520:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:180864-180941:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:180615-180691:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:180386-180453:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:180085-180198:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:179771-179949:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:179510-179597:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:179133-179296:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:178951-179038:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:178672-178835:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:178399-178559:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:178071-178195:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:177776-177939:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:177569-177659:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:177321-177488:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:177035-177195:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:176790-176960:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:176390-176473:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:176213-176284:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:175666-175735:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:175344-175552:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:175103-175255:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:174842-175005:-1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:174450-174674:-1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:174230-174370:-1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:173776-173860:-1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:173464-173696:-1:exon

urn:…
SIO_000300: 30
SIO_000628: feature:173250-173382:-1:exon

urn:…
SIO_000300: 31
SIO_000628: feature:172786-172888:-1:exon

urn:…
SIO_000300: 32
SIO_000628: feature:172479-172623:-1:exon

urn:…
SIO_000300: 33
SIO_000628: feature:172231-172318:-1:exon

urn:…
SIO_000300: 34
SIO_000628: feature:171788-172000:-1:exon

urn:…
SIO_000300: 35
SIO_000628: feature:171526-171692:-1:exon

urn:…
SIO_000300: 36
SIO_000628: feature:171280-171381:-1:exon

urn:…
SIO_000300: 37
SIO_000628: feature:171033-171141:-1:exon

urn:…
SIO_000300: 38
SIO_000628: feature:170801-170914:-1:exon

TTC24
type: Gene
subclass of: SO_0000704
RO_0002162: 8839
gene: TTC24
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 184551..186321
location: region:184551-186321:1
so has part: feature:184551-186321:1:exon
subclass of: SO_0000010

101799493
type: Gene
SIO_000068: ncbigene

position:184551:1
position: 184551
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:186321:1
position: 186321
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:184551-186321:1:exon

TTC24
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8839
gene: TTC24
product: tetratricopeptide repeat domain 24
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 83% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_038167890.1
SIO_010081: TTC24
subclass of: SO_0000673
so part of: TTC24
location: join(184551..185307,185387..185599,185671..185799,185898..186321)
location: region:184551-186321:1
so has part: feature:184551-185307:1:exon
so has part: feature:185387-185599:1:exon
so has part: feature:185671-185799:1:exon
so has part: feature:185898-186321:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:184551-185307:1:exon

position:185307:1
position: 185307
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:185387-185599:1:exon

position:185387:1
position: 185387
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:185599:1
position: 185599
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:185671-185799:1:exon

position:185671:1
position: 185671
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:185799:1
position: 185799
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:185898-186321:1:exon

position:185898:1
position: 185898
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

TTC24
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8839
gene: TTC24
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: tetratricopeptide repeat protein 24
translation: MARRRKSQKKRKEKLAVVEEAKEGGNGAKGQAAKIKGQAAEIEGLTQAGQQALGLQDVRGALACFRKAFLLSLGTTSPRLRRVCSFNLGAAYVEAGKPRKGLKFLLESQPAEGEPFGGLYFNIGAAGEGLRDFPKALECFGQAAGPCRAGSQAVEMGCCYLGMQEPARAARCFLEAAHSYAVAESPEAAAVALSRASGSMLQSRRFGVAEIARILTWCRSLCDSIADPTLRGKLYNEVGLGFSQLHVFSLASESFERALALCQGSLGRRGEAALLQNLGAARNALRSFGTALGLHRRAAELHGAVGNRRAQGQCFGNLAYAFSQLGNHEAAAENYLHALQAFRDSGDVQGQWQACEGLGAACFHLGNPQKAIGHYQEALTLLSRCRVRETSGPDPPVRGEHQPHHRDRLTWGGISLLQGTPRAAGERIVSQLSHALQHQLCLHRHPSYWGAPEPVSSTPGPFGVLGARWGPK
SIO_010081: TTC24
subclass of: SO_0000673
so part of: TTC24
location: join(184614..185307,185387..185599,185671..185799,185898..186280)
location: region:184614-186280:1
so has part: feature:184614-185307:1:exon
so has part: feature:185387-185599:1:exon
so has part: feature:185671-185799:1:exon
so has part: feature:185898-186280:1:exon

XP_038023818.1
type: Protein
SIO_000068: ncbiprotein

position:184614:1
position: 184614
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:186280:1
position: 186280
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:184614-185307:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:185387-185599:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:185671-185799:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:185898-186280:1:exon

NAXE
type: Gene
subclass of: SO_0000704
RO_0002162: 8839
gene: NAXE
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 188352..190300
location: region:188352-190300:1
so has part: feature:188352-190300:1:exon
subclass of: SO_0000010

113839871
type: Gene
SIO_000068: ncbigene

position:188352:1
position: 188352
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:190300:1
position: 190300
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:188352-190300:1:exon

NAXE
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8839
gene: NAXE
product: NAD(P)HX epimerase
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 7 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 126 samples with support for all annotated introns
transcript id: XM_027444514.2
SIO_010081: NAXE
subclass of: SO_0000673
so part of: NAXE
location: join(188352..188524,188984..189092,189171..189281,189392..189505,189597..189744,189834..190300)
location: region:188352-190300:1
so has part: feature:188352-188524:1:exon
so has part: feature:188984-189092:1:exon
so has part: feature:189171-189281:1:exon
so has part: feature:189392-189505:1:exon
so has part: feature:189597-189744:1:exon
so has part: feature:189834-190300:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:188352-188524:1:exon

position:188524:1
position: 188524
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:188984-189092:1:exon

position:188984:1
position: 188984
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:189092:1
position: 189092
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:189171-189281:1:exon

position:189171:1
position: 189171
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:189281:1
position: 189281
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:189392-189505:1:exon

position:189392:1
position: 189392
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:189505:1
position: 189505
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:189597-189744:1:exon

position:189597:1
position: 189597
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:189744:1
position: 189744
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:189834-190300:1:exon

position:189834:1
position: 189834
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

NAXE
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8839
gene: NAXE
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: NAD(P)H-hydrate epimerase
translation: MRGPRGLLGLGLGLGLLVAAGGARCPSRSWNWSRPRCAMHGSSTGGLRFLGQEEAQAIDQELFTEYKFSVDQLMELAGLSCATAIAKAYPPGSFTKSLPAVLVVCGPGNNGGDGLVCARHLKMFGYEPTVYYPKRPNKPLFEGLTTQCQKMDIPFLSEFPAEAALIDELYGLVVDAIFGFSFTGAVREPFGSILNTLERVTVPVASIDIPSGWDVEKGKADGLQPDMLISLTAPKKAAQHFTGRYHFLGGRFVPAALQKKYSLNLPPYPGTDCVLQLS
SIO_010081: NAXE
subclass of: SO_0000673
so part of: NAXE
location: join(188373..188524,188984..189092,189171..189281,189392..189505,189597..189744,189834..190036)
location: region:188373-190036:1
so has part: feature:188373-188524:1:exon
so has part: feature:188984-189092:1:exon
so has part: feature:189171-189281:1:exon
so has part: feature:189392-189505:1:exon
so has part: feature:189597-189744:1:exon
so has part: feature:189834-190036:1:exon

XP_027300315.2
type: Protein
SIO_000068: ncbiprotein

position:188373:1
position: 188373
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:190036:1
position: 190036
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:188373-188524:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:188984-189092:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:189171-189281:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:189392-189505:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:189597-189744:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:189834-190036:1:exon

GPATCH4
type: Gene
subclass of: SO_0000704
RO_0002162: 8839
gene: GPATCH4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(190263..192983)
location: region:190263-192983:-1
so has part: feature:190263-192983:-1:exon
subclass of: SO_0000010

101797790
type: Gene
SIO_000068: ncbigene

position:190263:-1
position: 190263
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:192983:-1
position: 192983
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:190263-192983:-1:exon

GPATCH4
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8839
gene: GPATCH4
product: G-patch domain containing 4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 126 samples with support for all annotated introns
transcript id: XM_027444513.2
SIO_010081: GPATCH4
subclass of: SO_0000673
so part of: GPATCH4
location: complement(join(190263..190936,191047..191097,191193..191302,191427..191534,191696..191788,191910..191983,192839..192983))
location: region:190263-192983:-1
so has part: feature:192839-192983:-1:exon
so has part: feature:191910-191983:-1:exon
so has part: feature:191696-191788:-1:exon
so has part: feature:191427-191534:-1:exon
so has part: feature:191193-191302:-1:exon
so has part: feature:191047-191097:-1:exon
so has part: feature:190263-190936:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:192839-192983:-1:exon

position:192839:-1
position: 192839
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:191910-191983:-1:exon

position:191910:-1
position: 191910
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:191983:-1
position: 191983
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:191696-191788:-1:exon

position:191696:-1
position: 191696
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:191788:-1
position: 191788
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:191427-191534:-1:exon

position:191427:-1
position: 191427
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:191534:-1
position: 191534
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:191193-191302:-1:exon

position:191193:-1
position: 191193
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:191302:-1
position: 191302
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:191047-191097:-1:exon

position:191047:-1
position: 191047
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:191097:-1
position: 191097
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:190263-190936:-1:exon

position:190936:-1
position: 190936
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

GPATCH4
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8839
gene: GPATCH4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: G patch domain-containing protein 4
translation: MSAPGPGGRGLSFAEGLLRRHGWSQGKGLGKKEDGISQALRVKVKCDSAGVGHNAAEQFSFHWWDHVFNESAANIAVEDGQDGVCLKTLGEQRSGISTKKPRKAVGAGSKLYGRFVKAATLTARGEEPAKLPAGSESSEEEEEEEKLDRSSARRLTDEELVRACGGRTAHKGARHGLTMSAKLARLEEQERAFLATYQQKREQPQPAELQEKKKKKKKKKKRAGDGAEAEAPQSCEPSGEEEVEGEEEKVAKRKKKKKKEKEELAEAEFPLEEAEGAEQAEHSPKKKKKRKKKRREEE
SIO_010081: GPATCH4
subclass of: SO_0000673
so part of: GPATCH4
location: complement(join(190552..190936,191047..191097,191193..191302,191427..191534,191696..191788,191910..191983,192839..192914))
location: region:190552-192914:-1
so has part: feature:192839-192914:-1:exon
so has part: feature:191910-191983:-1:exon
so has part: feature:191696-191788:-1:exon
so has part: feature:191427-191534:-1:exon
so has part: feature:191193-191302:-1:exon
so has part: feature:191047-191097:-1:exon
so has part: feature:190552-190936:-1:exon

XP_027300314.1
type: Protein
SIO_000068: ncbiprotein

position:190552:-1
position: 190552
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:192914:-1
position: 192914
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:192839-192914:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:191910-191983:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:191696-191788:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:191427-191534:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:191193-191302:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:191047-191097:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:190552-190936:-1:exon

UBQLN4
type: Gene
subclass of: SO_0000704
RO_0002162: 8839
gene: UBQLN4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(195421..207456)
location: region:195421-207456:-1
so has part: feature:195421-207456:-1:exon
subclass of: SO_0000010

101799862
type: Gene
SIO_000068: ncbigene

position:195421:-1
position: 195421
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:207456:-1
position: 207456
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:195421-207456:-1:exon

UBQLN4
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8839
gene: UBQLN4
product: ubiquilin 4, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 126 samples with support for all annotated introns
transcript id: XM_038167889.1
SIO_010081: UBQLN4
subclass of: SO_0000673
so part of: UBQLN4
location: complement(join(195421..196614,197045..197222,197821..197936,199116..199255,199424..199649,200371..200529,201768..202030,202328..202527,204832..204983,207052..207456))
location: region:195421-207456:-1
so has part: feature:207052-207456:-1:exon
so has part: feature:204832-204983:-1:exon
so has part: feature:202328-202527:-1:exon
so has part: feature:201768-202030:-1:exon
so has part: feature:200371-200529:-1:exon
so has part: feature:199424-199649:-1:exon
so has part: feature:199116-199255:-1:exon
so has part: feature:197821-197936:-1:exon
so has part: feature:197045-197222:-1:exon
so has part: feature:195421-196614:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:207052-207456:-1:exon

position:207052:-1
position: 207052
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:204832-204983:-1:exon

position:204832:-1
position: 204832
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:204983:-1
position: 204983
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:202328-202527:-1:exon

position:202328:-1
position: 202328
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:202527:-1
position: 202527
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:201768-202030:-1:exon

position:201768:-1
position: 201768
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:202030:-1
position: 202030
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:200371-200529:-1:exon

position:200371:-1
position: 200371
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:200529:-1
position: 200529
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:199424-199649:-1:exon

position:199424:-1
position: 199424
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:199649:-1
position: 199649
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:199116-199255:-1:exon

position:199116:-1
position: 199116
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:199255:-1
position: 199255
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:197821-197936:-1:exon

position:197821:-1
position: 197821
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:197936:-1
position: 197936
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:197045-197222:-1:exon

position:197045:-1
position: 197045
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:197222:-1
position: 197222
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:195421-196614:-1:exon

position:196614:-1
position: 196614
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

UBQLN4
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8839
gene: UBQLN4
product: ubiquilin 4, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 126 samples with support for all annotated introns
transcript id: XM_027444488.2
SIO_010081: UBQLN4
subclass of: SO_0000673
so part of: UBQLN4
location: complement(join(195421..196614,197045..197222,197821..197936,198573..198656,199116..199255,199424..199649,200371..200529,201768..202030,202328..202527,204832..204983,207052..207456))
location: region:195421-207456:-1
so has part: feature:207052-207456:-1:exon
so has part: feature:204832-204983:-1:exon
so has part: feature:202328-202527:-1:exon
so has part: feature:201768-202030:-1:exon
so has part: feature:200371-200529:-1:exon
so has part: feature:199424-199649:-1:exon
so has part: feature:199116-199255:-1:exon
so has part: feature:198573-198656:-1:exon
so has part: feature:197821-197936:-1:exon
so has part: feature:197045-197222:-1:exon
so has part: feature:195421-196614:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:207052-207456:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:204832-204983:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:202328-202527:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:201768-202030:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:200371-200529:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:199424-199649:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:199116-199255:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:198573-198656:-1:exon

position:198573:-1
position: 198573
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:198656:-1
position: 198656
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:197821-197936:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:197045-197222:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:195421-196614:-1:exon

UBQLN4
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8839
gene: UBQLN4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: ubiquilin-4 isoform X2
translation: MRPTRSQTKKKQKISPAPSLFPPRSFAEAPPGRQGAEEAAGKRGGFGRGAPPFSVGGGPGGRRRWRSRAAAAAVAEEEEEEEEEEEGGGGGPGPGGVELGGPGGALIRVTVKTPKDKEEIVIADGASVREFKEEISRRFKAKQDQLVLIFAGKILKDGDTLNQHGIKDGLTVHLVIKTPQKVQDPTAAASAPNAASAPTSTSPSPAAPSQPSTSSSAASDAGSRRSSGSGTGGGPGDGGPNSATSILSGFGGITGLGNLGMGSANFMELQQQMQRQLMSNPEMLSQIMENPLVQNMMSNPDLMRQMIMANPQMQQLMERNPEISHMLNNPELMRQTMELARNPAMMQEMMRNQDRALSNLESIPGGYNALRRMYTDIQEPMFSAAREQFGNNPFSSLTGNSDSSSSQPLRTENREPLPNPWSPTPPASQSQAPNSEGSTGPATTQSTPTVSNPFGLNAASIGAGMFNSPEMQGLLQQISENPQLMQNMISAPYMRSMMQTLAQNPDFAAQMQNPDSLSILTNPRAMQALLQIQQGLQTLQTEAPGLVPSLGSFGMPRMPPSSTGGSTIPENPVPSASTPASASPAGGGNPQQQLMQQMIQLLAGGSSQAQSPEVRFQQQLEQLNAMGFINREANLQALIATGGDINAAIERLLGSQPS
SIO_010081: UBQLN4
subclass of: SO_0000673
so part of: UBQLN4
location: complement(join(196462..196614,197045..197222,197821..197936,199116..199255,199424..199649,200371..200529,201768..202030,202328..202527,204832..204983,207052..207441))
location: region:196462-207441:-1
so has part: feature:207052-207441:-1:exon
so has part: feature:204832-204983:-1:exon
so has part: feature:202328-202527:-1:exon
so has part: feature:201768-202030:-1:exon
so has part: feature:200371-200529:-1:exon
so has part: feature:199424-199649:-1:exon
so has part: feature:199116-199255:-1:exon
so has part: feature:197821-197936:-1:exon
so has part: feature:197045-197222:-1:exon
so has part: feature:196462-196614:-1:exon

XP_038023817.1
type: Protein
SIO_000068: ncbiprotein

position:196462:-1
position: 196462
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:207441:-1
position: 207441
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:207052-207441:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:204832-204983:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:202328-202527:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:201768-202030:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:200371-200529:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:199424-199649:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:199116-199255:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:197821-197936:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:197045-197222:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:196462-196614:-1:exon

UBQLN4
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8839
gene: UBQLN4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: ubiquilin-4 isoform X1
translation: MRPTRSQTKKKQKISPAPSLFPPRSFAEAPPGRQGAEEAAGKRGGFGRGAPPFSVGGGPGGRRRWRSRAAAAAVAEEEEEEEEEEEGGGGGPGPGGVELGGPGGALIRVTVKTPKDKEEIVIADGASVREFKEEISRRFKAKQDQLVLIFAGKILKDGDTLNQHGIKDGLTVHLVIKTPQKVQDPTAAASAPNAASAPTSTSPSPAAPSQPSTSSSAASDAGSRRSSGSGTGGGPGDGGPNSATSILSGFGGITGLGNLGMGSANFMELQQQMQRQLMSNPEMLSQIMENPLVQNMMSNPDLMRQMIMANPQMQQLMERNPEISHMLNNPELMRQTMELARNPAMMQEMMRNQDRALSNLESIPGGYNALRRMYTDIQEPMFSAAREQFGNNPFSSLTGNSDSSSSQPLRTENREPLPNPWSPTPPASQSQAPNSEGSTGPATTQSTPTVSNPFGLNAASIGAGMFNSPEMQGLLQQISENPQLMQNMISAPYMRSMMQTLAQNPDFAAQIMVNVPLFAGNPQLQEQLRLQLPVFLQQMQNPDSLSILTNPRAMQALLQIQQGLQTLQTEAPGLVPSLGSFGMPRMPPSSTGGSTIPENPVPSASTPASASPAGGGNPQQQLMQQMIQLLAGGSSQAQSPEVRFQQQLEQLNAMGFINREANLQALIATGGDINAAIERLLGSQPS
SIO_010081: UBQLN4
subclass of: SO_0000673
so part of: UBQLN4
location: complement(join(196462..196614,197045..197222,197821..197936,198573..198656,199116..199255,199424..199649,200371..200529,201768..202030,202328..202527,204832..204983,207052..207441))
location: region:196462-207441:-1
so has part: feature:207052-207441:-1:exon
so has part: feature:204832-204983:-1:exon
so has part: feature:202328-202527:-1:exon
so has part: feature:201768-202030:-1:exon
so has part: feature:200371-200529:-1:exon
so has part: feature:199424-199649:-1:exon
so has part: feature:199116-199255:-1:exon
so has part: feature:198573-198656:-1:exon
so has part: feature:197821-197936:-1:exon
so has part: feature:197045-197222:-1:exon
so has part: feature:196462-196614:-1:exon

XP_027300289.2
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:207052-207441:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:204832-204983:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:202328-202527:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:201768-202030:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:200371-200529:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:199424-199649:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:199116-199255:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:198573-198656:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:197821-197936:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:197045-197222:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:196462-196614:-1:exon

LAMTOR2
type: Gene
subclass of: SO_0000704
RO_0002162: 8839
gene: LAMTOR2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 207554..208907
location: region:207554-208907:1
so has part: feature:207554-208907:1:exon
subclass of: SO_0000010

101800055
type: Gene
SIO_000068: ncbigene

position:207554:1
position: 207554
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:208907:1
position: 208907
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:207554-208907:1:exon

LAMTOR2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8839
gene: LAMTOR2
product: late endosomal/lysosomal adaptor, MAPK and MTOR activator 2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 14 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 126 samples with support for all annotated introns
transcript id: XM_027444434.2
SIO_010081: LAMTOR2
subclass of: SO_0000673
so part of: LAMTOR2
location: join(207554..207716,208008..208170,208295..208384,208707..208907)
location: region:207554-208907:1
so has part: feature:207554-207716:1:exon
so has part: feature:208008-208170:1:exon
so has part: feature:208295-208384:1:exon
so has part: feature:208707-208907:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:207554-207716:1:exon

position:207716:1
position: 207716
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:208008-208170:1:exon

position:208008:1
position: 208008
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:208170:1
position: 208170
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:208295-208384:1:exon

position:208295:1
position: 208295
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:208384:1
position: 208384
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:208707-208907:1:exon

position:208707:1
position: 208707
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LAMTOR2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8839
gene: LAMTOR2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: ragulator complex protein LAMTOR2
translation: MLRPKALTQVLSQANTGGVQSTLLLNNEGSLLAYSGYGDTDARVTAAIASNIWVAYDKNGHQAFNEDNLKFILMDCMEGRVAITRVANLLLCMYAKETVGFGMLKAKAQALVQYLEEPLTQVAAS
SIO_010081: LAMTOR2
subclass of: SO_0000673
so part of: LAMTOR2
location: join(207649..207716,208008..208170,208295..208384,208707..208763)
location: region:207649-208763:1
so has part: feature:207649-207716:1:exon
so has part: feature:208008-208170:1:exon
so has part: feature:208295-208384:1:exon
so has part: feature:208707-208763:1:exon

XP_027300235.2
type: Protein
SIO_000068: ncbiprotein

position:207649:1
position: 207649
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:208763:1
position: 208763
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:207649-207716:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:208008-208170:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:208295-208384:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:208707-208763:1:exon

RAB25
type: Gene
subclass of: SO_0000704
RO_0002162: 8839
gene: RAB25
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 209057..212791
location: region:209057-212791:1
so has part: feature:209057-212791:1:exon
subclass of: SO_0000010

106017744
type: Gene
SIO_000068: ncbigene

position:209057:1
position: 209057
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:212791:1
position: 212791
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:209057-212791:1:exon

RAB25
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8839
gene: RAB25
product: RAB25, member RAS oncogene family
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 53 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 75 samples with support for all annotated introns
transcript id: XM_027444489.2
SIO_010081: RAB25
subclass of: SO_0000673
so part of: RAB25
location: join(209057..209551,210677..210872,210964..211157,211313..211393,212189..212791)
location: region:209057-212791:1
so has part: feature:209057-209551:1:exon
so has part: feature:210677-210872:1:exon
so has part: feature:210964-211157:1:exon
so has part: feature:211313-211393:1:exon
so has part: feature:212189-212791:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:209057-209551:1:exon

position:209551:1
position: 209551
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:210677-210872:1:exon

position:210677:1
position: 210677
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:210872:1
position: 210872
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:210964-211157:1:exon

position:210964:1
position: 210964
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:211157:1
position: 211157
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:211313-211393:1:exon

position:211313:1
position: 211313
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:211393:1
position: 211393
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:212189-212791:1:exon

position:212189:1
position: 212189
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

RAB25
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8839
gene: RAB25
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: ras-related protein Rab-25
translation: MSSAEEDYNFVFKVVLIGESGVGKTNLLSRFTRNEFNHDSRTTIGVEFSTRTIVVGDATVKAQIWDTAGLERYRAITSAYYRGAVGALVVFDITKHQTYDVVDRWLKELYDHAEPSIVVMLVGNKTDLAQAREVPTEEAKMFAENNGLLFLETSALDSTNVEQAFETILKEIFQKVQKQKQRSSQSSTVSLGSENPESSAPAQGEKRPCCVAI
SIO_010081: RAB25
subclass of: SO_0000673
so part of: RAB25
location: join(209512..209551,210677..210872,210964..211157,211313..211393,212189..212319)
location: region:209512-212319:1
so has part: feature:209512-209551:1:exon
so has part: feature:210677-210872:1:exon
so has part: feature:210964-211157:1:exon
so has part: feature:211313-211393:1:exon
so has part: feature:212189-212319:1:exon

XP_027300290.2
type: Protein
SIO_000068: ncbiprotein

position:209512:1
position: 209512
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:212319:1
position: 212319
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:209512-209551:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:210677-210872:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:210964-211157:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:211313-211393:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:212189-212319:1:exon

LOC101800252
type: Gene
subclass of: SO_0000704
RO_0002162: 8839
gene: LOC101800252
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 213651..218129
location: region:213651-218129:1
so has part: feature:213651-218129:1:exon
subclass of: SO_0000010

101800252
type: Gene
SIO_000068: ncbigene

position:213651:1
position: 213651
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:218129:1
position: 218129
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:213651-218129:1:exon

LOC101800252
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8839
gene: LOC101800252
product: ras-related protein Rab-11A-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 61 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 63 samples with support for all annotated introns
transcript id: XM_027444517.2
SIO_010081: LOC101800252
subclass of: SO_0000673
so part of: LOC101800252
location: join(213651..213749,216105..216300,216385..216578,216656..216736,216901..218129)
location: region:213651-218129:1
so has part: feature:213651-213749:1:exon
so has part: feature:216105-216300:1:exon
so has part: feature:216385-216578:1:exon
so has part: feature:216656-216736:1:exon
so has part: feature:216901-218129:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:213651-213749:1:exon

position:213749:1
position: 213749
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:216105-216300:1:exon

position:216105:1
position: 216105
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:216300:1
position: 216300
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:216385-216578:1:exon

position:216385:1
position: 216385
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:216578:1
position: 216578
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:216656-216736:1:exon

position:216656:1
position: 216656
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:216736:1
position: 216736
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:216901-218129:1:exon

position:216901:1
position: 216901
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC101800252
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8839
gene: LOC101800252
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: ras-related protein Rab-11A-like
translation: MRGRDEEYDCLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDNKTVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKYLTYENAERWLKELQDHADANIVIMLVGNKSDLRHLRAVPTDEARSFAEKNGLSFLETSALDSTNVETAFHSILTEIYRLVSQRQIAGQPESEFGPSTTIEPVRVLPTQQEGRQAPCCQNI
SIO_010081: LOC101800252
subclass of: SO_0000673
so part of: LOC101800252
location: join(213710..213749,216105..216300,216385..216578,216656..216736,216901..217040)
location: region:213710-217040:1
so has part: feature:213710-213749:1:exon
so has part: feature:216105-216300:1:exon
so has part: feature:216385-216578:1:exon
so has part: feature:216656-216736:1:exon
so has part: feature:216901-217040:1:exon

XP_027300318.1
type: Protein
SIO_000068: ncbiprotein

position:213710:1
position: 213710
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:217040:1
position: 217040
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:213710-213749:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:216105-216300:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:216385-216578:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:216656-216736:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:216901-217040:1:exon

MEX3A
type: Gene
subclass of: SO_0000704
RO_0002162: 8839
gene: MEX3A
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(223228..240626)
location: region:223228-240626:-1
so has part: feature:223228-240626:-1:exon
subclass of: SO_0000010

101800444
type: Gene
SIO_000068: ncbigene

position:223228:-1
position: 223228
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:240626:-1
position: 240626
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:223228-240626:-1:exon

MEX3A
type: Miscellaneous RNA
subclass of: SO_0000673
RO_0002162: 8839
gene: MEX3A
product: mex-3 RNA binding family member A, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 35 samples with support for all annotated introns
transcript id: XR_005260994.1
SIO_010081: MEX3A
so part of: MEX3A
location: complement(join(223228..225965,226339..229055,240068..240626))
location: region:223228-240626:-1
so has part: feature:240068-240626:-1:exon
so has part: feature:226339-229055:-1:exon
so has part: feature:223228-225965:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:240068-240626:-1:exon

position:240068:-1
position: 240068
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:226339-229055:-1:exon

position:226339:-1
position: 226339
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:229055:-1
position: 229055
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:223228-225965:-1:exon

position:225965:-1
position: 225965
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

MEX3A
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8839
gene: MEX3A
product: mex-3 RNA binding family member A, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 76 samples with support for all annotated introns
transcript id: XM_027444518.2
SIO_010081: MEX3A
subclass of: SO_0000673
so part of: MEX3A
location: complement(join(223228..229055,240068..240626))
location: region:223228-240626:-1
so has part: feature:240068-240626:-1:exon
so has part: feature:223228-229055:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:240068-240626:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:223228-229055:-1:exon

MEX3A
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8839
gene: MEX3A
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: RNA-binding protein MEX3A
translation: MPSLVVPGIMERNGGFGDLGCFGGSGKDRALLEDDRALQLALDQLCLLGLGEPSSSSSSAAVVLVEDSNNNNNNPQQQQQQQQQQPPPPPPPPPPQQPPPPPPPPPPPAPKGPPVPSAGAAEPKLCALYKEAELRLKSSSNTTECVPVPSSEHVAEIVGRQGCKIKALRAKTNTYIKTPVRGEEPVFMVTGRREDVAMARREIISAAEHFSMIRASRNKAGTTFGSAPTLPGQVTIRVRVPYRVVGLVVGPKGATIKRIQQQTNTYIITPSRDRDPVFEITGAPGNVERAREEIETHIAVRTGKILEYNNENDFLSSSPDSGMENRYSEAWRVHTPAPGCKPLSTFRQNSLGCIGDCSVDPVYETPRLNDQNDFNYGYLFPNYGVNKQDLYYGVPESGAPMWAGQENTNPVSVLFSKQQRSSSTGAIHPNSHRSPSSSIQEPNLSGLPRRSQGEPLQGFSKLGTTAAARTSVSSSRECMVCFESEVTAALVPCGHNLFCMECAVRICERTDPECPVCHAAATQAIRIFS
SIO_010081: MEX3A
subclass of: SO_0000673
so part of: MEX3A
location: complement(join(227950..229055,240068..240551))
location: region:227950-240551:-1
so has part: feature:240068-240551:-1:exon
so has part: feature:227950-229055:-1:exon

XP_027300319.2
type: Protein
SIO_000068: ncbiprotein

position:227950:-1
position: 227950
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:240551:-1
position: 240551
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:240068-240551:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:227950-229055:-1:exon

LMNA
type: Gene
subclass of: SO_0000704
RO_0002162: 8839
gene: LMNA
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 255561..272310
location: region:255561-272310:1
so has part: feature:255561-272310:1:exon
subclass of: SO_0000010

101797969
type: Gene
SIO_000068: ncbigene

position:255561:1
position: 255561
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:272310:1
position: 272310
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:255561-272310:1:exon

LMNA
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8839
gene: LMNA
product: lamin A/C
exception: unclassified transcription discrepancy
note: The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: inserted 2 bases in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 98% coverage of the annotated genomic feature by RNAseq alignments, including 126 samples with support for all annotated introns
transcript id: XM_005021706.3
SIO_010081: LMNA
subclass of: SO_0000673
so part of: LMNA
location: join(255561..256235,267158..267314,267458..267583,267752..267922,268055..268180,268291..268511,268606..268808,268918..269025,269120..269239,269724..269813,270558..270815,270971..272310)
location: region:255561-272310:1
so has part: feature:255561-256235:1:exon
so has part: feature:267158-267314:1:exon
so has part: feature:267458-267583:1:exon
so has part: feature:267752-267922:1:exon
so has part: feature:268055-268180:1:exon
so has part: feature:268291-268511:1:exon
so has part: feature:268606-268808:1:exon
so has part: feature:268918-269025:1:exon
so has part: feature:269120-269239:1:exon
so has part: feature:269724-269813:1:exon
so has part: feature:270558-270815:1:exon
so has part: feature:270971-272310:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:255561-256235:1:exon

position:256235:1
position: 256235
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:267158-267314:1:exon

position:267158:1
position: 267158
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:267314:1
position: 267314
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:267458-267583:1:exon

position:267458:1
position: 267458
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:267583:1
position: 267583
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:267752-267922:1:exon

position:267752:1
position: 267752
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:267922:1
position: 267922
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:268055-268180:1:exon

position:268055:1
position: 268055
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:268180:1
position: 268180
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:268291-268511:1:exon

position:268291:1
position: 268291
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:268511:1
position: 268511
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:268606-268808:1:exon

position:268606:1
position: 268606
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:268808:1
position: 268808
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:268918-269025:1:exon

position:268918:1
position: 268918
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:269025:1
position: 269025
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:269120-269239:1:exon

position:269120:1
position: 269120
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:269239:1
position: 269239
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:269724-269813:1:exon

position:269724:1
position: 269724
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:269813:1
position: 269813
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:270558-270815:1:exon

position:270558:1
position: 270558
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:270815:1
position: 270815
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:270971-272310:1:exon

position:270971:1
position: 270971
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LMNA
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8839
gene: LMNA
exception: unclassified translation discrepancy
note: The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: inserted 2 bases in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: LOW QUALITY PROTEIN: lamin
translation: MATPSQKRSTRSGASGTPLSPTRITRLQEKEDLQELNDRLAVYIDKVRSLELENAGLRLRITESEEVVSREVSGIKAAYESELADARKTLDSVAKERARLQLELSKVQEEHKELKARNAKKEGDLLSAQARLKDLEALLNSKEAALSTALSEKRNLEAEVRDLRAQVAKLESACNEAKKQLQDEMLRRVDAENRLQTLKEELEFQKNIYSEELRETKRRHETRLVEIDNGRQQEFESKLSEALQDLRRQHENQIKQYKEELEKTYSAKLENAKQSAERNSNIAGAAHEELQQVRIRIDSLSSEVSHLQKQLAAKEAKLHDLEDALSRERETNRRLLSDKDREMAEMRARMQQQLDEYQELLDIKLALDMEINAYRKLLEGEEERLRLSPSPSSXTKDTGSTSPARAQSKKRKLEDSESRTSFSHHARTSGRIGVEEVDLEGRFVRLKNKSNEDQAIGNWQIKRQNGDDPVITYRFPPRFTLKAGQMVTIWASGAGATHSPPTDMVWKNQSSWGCGDSLRTALINSNGEEVAMRKLVRTVIINNEDDDEDDETGHRHHHGSCGDSGDPGEYNLRSRTVVCSSCGQPADKSGSQNAGLSSMSSGSSSSVTVTRSYRSLGGSGGGSGLGENLVTRSYILGSSSPRRQAQAPQNCSIM
SIO_010081: LMNA
subclass of: SO_0000673
so part of: LMNA
location: join(255886..256235,267158..267314,267458..267583,267752..267922,268055..268180,268291..268511,268606..268808,268918..269025,269120..269239,269724..269813,270558..270815,270971..271003)
location: region:255886-271003:1
so has part: feature:255886-256235:1:exon
so has part: feature:267158-267314:1:exon
so has part: feature:267458-267583:1:exon
so has part: feature:267752-267922:1:exon
so has part: feature:268055-268180:1:exon
so has part: feature:268291-268511:1:exon
so has part: feature:268606-268808:1:exon
so has part: feature:268918-269025:1:exon
so has part: feature:269120-269239:1:exon
so has part: feature:269724-269813:1:exon
so has part: feature:270558-270815:1:exon
so has part: feature:270971-271003:1:exon

XP_005021763.3
type: Protein
SIO_000068: ncbiprotein

position:255886:1
position: 255886
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:271003:1
position: 271003
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:255886-256235:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:267158-267314:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:267458-267583:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:267752-267922:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:268055-268180:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:268291-268511:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:268606-268808:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:268918-269025:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:269120-269239:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:269724-269813:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:270558-270815:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:270971-271003:1:exon

SEMA4A
type: Gene
subclass of: SO_0000704
RO_0002162: 8839
gene: SEMA4A
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 274652..282777
location: region:274652-282777:1
so has part: feature:274652-282777:1:exon
subclass of: SO_0000010

101800635
type: Gene
SIO_000068: ncbigene

position:274652:1
position: 274652
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:282777:1
position: 282777
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:274652-282777:1:exon

SEMA4A
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8839
gene: SEMA4A
product: semaphorin 4A
exception: unclassified transcription discrepancy
note: The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: deleted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins, and 96% coverage of the annotated genomic feature by RNAseq alignments, including 15 samples with support for all annotated introns
transcript id: XM_038168057.1
SIO_010081: SEMA4A
subclass of: SO_0000673
so part of: SEMA4A
location: join(274652..274723,277446..277586,278625..278786,278920..278982,279083..279181,279459..279567,279686..279802,279922..280052,280142..280317,280407..280557,280669..280858,280966..281082,281541..281704,281792..281904,282004..282777)
location: region:274652-282777:1
so has part: feature:274652-274723:1:exon
so has part: feature:277446-277586:1:exon
so has part: feature:278625-278786:1:exon
so has part: feature:278920-278982:1:exon
so has part: feature:279083-279181:1:exon
so has part: feature:279459-279567:1:exon
so has part: feature:279686-279802:1:exon
so has part: feature:279922-280052:1:exon
so has part: feature:280142-280317:1:exon
so has part: feature:280407-280557:1:exon
so has part: feature:280669-280858:1:exon
so has part: feature:280966-281082:1:exon
so has part: feature:281541-281704:1:exon
so has part: feature:281792-281904:1:exon
so has part: feature:282004-282777:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:274652-274723:1:exon

position:274723:1
position: 274723
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:277446-277586:1:exon

position:277446:1
position: 277446
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:277586:1
position: 277586
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:278625-278786:1:exon

position:278625:1
position: 278625
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:278786:1
position: 278786
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:278920-278982:1:exon

position:278920:1
position: 278920
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:278982:1
position: 278982
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:279083-279181:1:exon

position:279083:1
position: 279083
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:279181:1
position: 279181
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:279459-279567:1:exon

position:279459:1
position: 279459
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:279567:1
position: 279567
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:279686-279802:1:exon

position:279686:1
position: 279686
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:279802:1
position: 279802
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:279922-280052:1:exon

position:279922:1
position: 279922
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:280052:1
position: 280052
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:280142-280317:1:exon

position:280142:1
position: 280142
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:280317:1
position: 280317
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:280407-280557:1:exon

position:280407:1
position: 280407
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:280557:1
position: 280557
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:280669-280858:1:exon

position:280669:1
position: 280669
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:280858:1
position: 280858
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:280966-281082:1:exon

position:280966:1
position: 280966
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:281082:1
position: 281082
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:281541-281704:1:exon

position:281541:1
position: 281541
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:281704:1
position: 281704
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:281792-281904:1:exon

position:281792:1
position: 281792
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:281904:1
position: 281904
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:282004-282777:1:exon

position:282004:1
position: 282004
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

SEMA4A
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8839
gene: SEMA4A
exception: unclassified translation discrepancy
note: The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: deleted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: LOW QUALITY PROTEIN: semaphorin-4A
translation: MLHPPGPPRPPARPRALPQGRCRGPRGARACRPPPCPQPPSACSAAWWCQPPCSAPSPCPASPSPAETPGGILTRFSQENVSHYDIFLLGEGEEELYVGARDRVLALAVGAPGTIHAKASITWGPTAEKTSECAFKKKSRETECFNFIRVLVALNQTHLYVCGTYAFSPACTYIHLENFTLVSSGKSQPFLDGKGQCPFDPQHTYTALLVDGELYAGTMNNFQGNEPIISRSLGSRTLLKTDAFLRWLSADAAFVASFSIPNDDKVYFFFEETADEFDFFERLLVPRVARVCKSDVGGDKVLQKKWTTFLKAQLVCSQPGRFPFNVIHHAFALPRRDGSGGADFYAVFTSQWQAGRAGSAAVCVYSQEALEEVFEGKYKELNKESSRWTVYSGPHISPRPGSCSMGPSSDKALTFMKDHFLMDGKVAPTQGRPLLVKTDVKYTRIAVDETPGILGTVYRVMFLATEEGFLHKAVELPAGTHIVESIQLFGTAEPVKNLLLAPGKGILYIGYSGGILQVPLANCSQHRSCAECVLARDPYCAWHIARSSCQPTRAASGDNSGWLQDVEEGSPAAVCHRGRSLAMPHTHGVHEGLPVERLSPSLNAVVRLACPQRSALATYSWQQPGGRGGSGALLPNHTLVVIVRRGTAGTYTCLATENGYTWPVARYHLQDPLGETPQDGPAQEGLSWDTPGGPRWPPFLLAPICHRHRAAGRDPGGRRRLGPRRLLRAAEGQEQGAGVQRAPKPPRPSSGEGTAQRGGPGR
SIO_010081: SEMA4A
subclass of: SO_0000673
so part of: SEMA4A
location: join(274667..274723,277446..277586,278625..278786,278920..278982,279083..279181,279459..279567,279686..279802,279922..280052,280142..280317,280407..280557,280669..280858,280966..281082,281541..281704,281792..281904,282004..282503)
location: region:274667-282503:1
so has part: feature:274667-274723:1:exon
so has part: feature:277446-277586:1:exon
so has part: feature:278625-278786:1:exon
so has part: feature:278920-278982:1:exon
so has part: feature:279083-279181:1:exon
so has part: feature:279459-279567:1:exon
so has part: feature:279686-279802:1:exon
so has part: feature:279922-280052:1:exon
so has part: feature:280142-280317:1:exon
so has part: feature:280407-280557:1:exon
so has part: feature:280669-280858:1:exon
so has part: feature:280966-281082:1:exon
so has part: feature:281541-281704:1:exon
so has part: feature:281792-281904:1:exon
so has part: feature:282004-282503:1:exon

XP_038023985.1
type: Protein
SIO_000068: ncbiprotein

position:274667:1
position: 274667
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:282503:1
position: 282503
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:274667-274723:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:277446-277586:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:278625-278786:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:278920-278982:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:279083-279181:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:279459-279567:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:279686-279802:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:279922-280052:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:280142-280317:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:280407-280557:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:280669-280858:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:280966-281082:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:281541-281704:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:281792-281904:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:282004-282503:1:exon

SLC25A44
type: Gene
subclass of: SO_0000704
RO_0002162: 8839
gene: SLC25A44
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 283518..291874
location: region:283518-291874:1
so has part: feature:283518-291874:1:exon
subclass of: SO_0000010

101798145
type: Gene
SIO_000068: ncbigene

position:283518:1
position: 283518
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:291874:1
position: 291874
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:283518-291874:1:exon

SLC25A44
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8839
gene: SLC25A44
product: solute carrier family 25 member 44
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 126 samples with support for all annotated introns
transcript id: XM_038167945.1
SIO_010081: SLC25A44
subclass of: SO_0000673
so part of: SLC25A44
location: join(283518..283695,286535..286644,286939..287665,289232..289359,289861..291874)
location: region:283518-291874:1
so has part: feature:283518-283695:1:exon
so has part: feature:286535-286644:1:exon
so has part: feature:286939-287665:1:exon
so has part: feature:289232-289359:1:exon
so has part: feature:289861-291874:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:283518-283695:1:exon

position:283695:1
position: 283695
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:286535-286644:1:exon

position:286535:1
position: 286535
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:286644:1
position: 286644
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:286939-287665:1:exon

position:286939:1
position: 286939
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:287665:1
position: 287665
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:289232-289359:1:exon

position:289232:1
position: 289232
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:289359:1
position: 289359
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:289861-291874:1:exon

position:289861:1
position: 289861
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

SLC25A44
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8839
gene: SLC25A44
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: solute carrier family 25 member 44
translation: MEDKRNIPIIEWEHLDKRKFYVFGICMTMMIRVSVYPFTLIRTRLQVQKGKSLYNGTFDAFVKILRTEGTAGLYRGFLVNTFTLISGQCYVTTYELTRKYVARYNNNNAVKSLVAGGSASLVAQSITVPIDVISQHLMMQRKGESMGRFKVQNPDGKRMLVFGQTKDIIVQIFKADGFRGFYRGYVASLLTYIPNSAVWWPFYHFYAEQLSSLTPKDCPHLLLQAISGPLAAATASTLTNPMDVIRARVQVEGKSSIILTFKQLMAEEGPWGLTKGLSARIISATPSTIVIVVGYETLKKLSLRPELVDSRHW
SIO_010081: SLC25A44
subclass of: SO_0000673
so part of: SLC25A44
location: join(287044..287665,289232..289359,289861..290052)
location: region:287044-290052:1
so has part: feature:287044-287665:1:exon
so has part: feature:289232-289359:1:exon
so has part: feature:289861-290052:1:exon

XP_038023873.1
type: Protein
SIO_000068: ncbiprotein

position:287044:1
position: 287044
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:290052:1
position: 290052
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:287044-287665:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:289232-289359:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:289861-290052:1:exon

PMF1
type: Gene
subclass of: SO_0000704
RO_0002162: 8839
gene: PMF1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 293006..296199
location: region:293006-296199:1
so has part: feature:293006-296199:1:exon
subclass of: SO_0000010

101800825
type: Gene
SIO_000068: ncbigene

position:293006:1
position: 293006
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:296199:1
position: 296199
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:293006-296199:1:exon

PMF1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8839
gene: PMF1
product: polyamine modulated factor 1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 8 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 126 samples with support for all annotated introns
transcript id: XM_027444527.2
SIO_010081: PMF1
subclass of: SO_0000673
so part of: PMF1
location: join(293006..293202,293298..293403,293642..293742,294255..294450,294800..296199)
location: region:293006-296199:1
so has part: feature:293006-293202:1:exon
so has part: feature:293298-293403:1:exon
so has part: feature:293642-293742:1:exon
so has part: feature:294255-294450:1:exon
so has part: feature:294800-296199:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:293006-293202:1:exon

position:293202:1
position: 293202
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:293298-293403:1:exon

position:293298:1
position: 293298
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:293403:1
position: 293403
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:293642-293742:1:exon

position:293642:1
position: 293642
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:293742:1
position: 293742
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:294255-294450:1:exon

position:294255:1
position: 294255
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:294450:1
position: 294450
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:294800-296199:1:exon

position:294800:1
position: 294800
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

PMF1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8839
gene: PMF1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: polyamine-modulated factor 1
translation: MAAAAAEAGSGGAEGTAAGGDGGPEELGDGVLGRGQLFAAVVDAFMEKLVAAGSYQRFASCYHRFYRLQPELTRSIYDQFVAQLQASIKEEIQEVKKEGNLEELFNSLDKIVEEAKDWKEPAWRPSGIPEEDIRSAVVPYLLKHKSYLQKVLKEKEEENRKLAESVLAGRDQIAKLQQLIDTRRQAWQAISKEQRELIMTFKEPQ
SIO_010081: PMF1
subclass of: SO_0000673
so part of: PMF1
location: join(293042..293202,293298..293403,293642..293742,294255..294450,294800..294853)
location: region:293042-294853:1
so has part: feature:293042-293202:1:exon
so has part: feature:293298-293403:1:exon
so has part: feature:293642-293742:1:exon
so has part: feature:294255-294450:1:exon
so has part: feature:294800-294853:1:exon

XP_027300328.2
type: Protein
SIO_000068: ncbiprotein

position:293042:1
position: 293042
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:294853:1
position: 294853
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:293042-293202:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:293298-293403:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:293642-293742:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:294255-294450:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:294800-294853:1:exon

LOC101798385
type: Gene
subclass of: SO_0000704
RO_0002162: 8839
gene: LOC101798385
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 296684..298116
location: region:296684-298116:1
so has part: feature:296684-298116:1:exon
subclass of: SO_0000010

101798385
type: Gene
SIO_000068: ncbigene

position:296684:1
position: 296684
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:298116:1
position: 298116
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:296684-298116:1:exon

LOC101798385
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8839
gene: LOC101798385
product: bone gamma-carboxyglutamate protein
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 84% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_038167708.1
SIO_010081: LOC101798385
subclass of: SO_0000673
so part of: LOC101798385
location: join(296684..296729,297503..297547,297677..297743,297871..298116)
location: region:296684-298116:1
so has part: feature:296684-296729:1:exon
so has part: feature:297503-297547:1:exon
so has part: feature:297677-297743:1:exon
so has part: feature:297871-298116:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:296684-296729:1:exon

position:296729:1
position: 296729
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:297503-297547:1:exon

position:297503:1
position: 297503
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:297547:1
position: 297547
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:297677-297743:1:exon

position:297677:1
position: 297677
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:297743:1
position: 297743
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:297871-298116:1:exon

position:297871:1
position: 297871
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC101798385
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8839
gene: LOC101798385
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: osteocalcin
translation: MGSGPADLERLPLKEPPEHSVSADESPSSEAFISKRASAEMTRRHKRNYVYDSSVQGAAPAWNPLEAKREVCELNPDCDELADHIGFQEAYRRFYGPV
SIO_010081: LOC101798385
subclass of: SO_0000673
so part of: LOC101798385
location: join(296684..296729,297503..297547,297677..297743,297871..298009)
location: region:296684-298009:1
so has part: feature:296684-296729:1:exon
so has part: feature:297503-297547:1:exon
so has part: feature:297677-297743:1:exon
so has part: feature:297871-298009:1:exon

XP_038023636.1
type: Protein
SIO_000068: ncbiprotein

position:298009:1
position: 298009
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:296684-296729:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:297503-297547:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:297677-297743:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:297871-298009:1:exon

SMG5
type: Gene
subclass of: SO_0000704
RO_0002162: 8839
gene: SMG5
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(298922..324503)
location: region:298922-324503:-1
so has part: feature:298922-324503:-1:exon
subclass of: SO_0000010

101798513
type: Gene
SIO_000068: ncbigene

position:298922:-1
position: 298922
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:324503:-1
position: 324503
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:298922-324503:-1:exon

SMG5
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8839
gene: SMG5
product: SMG5 nonsense mediated mRNA decay factor, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_038167838.1
SIO_010081: SMG5
subclass of: SO_0000673
so part of: SMG5
location: complement(join(298922..302708,303075..303213,303548..303622,304197..304287,304387..304546,304863..304922,305153..305311,306301..306476,307149..307224,307513..307682,309502..310203,311303..311440,311583..311791,313453..313521,313983..314108,314557..314635,315509..315598,316670..316759,319110..319278,319941..320064,320682..320780,324288..324503))
location: region:298922-324503:-1
so has part: feature:324288-324503:-1:exon
so has part: feature:320682-320780:-1:exon
so has part: feature:319941-320064:-1:exon
so has part: feature:319110-319278:-1:exon
so has part: feature:316670-316759:-1:exon
so has part: feature:315509-315598:-1:exon
so has part: feature:314557-314635:-1:exon
so has part: feature:313983-314108:-1:exon
so has part: feature:313453-313521:-1:exon
so has part: feature:311583-311791:-1:exon
so has part: feature:311303-311440:-1:exon
so has part: feature:309502-310203:-1:exon
so has part: feature:307513-307682:-1:exon
so has part: feature:307149-307224:-1:exon
so has part: feature:306301-306476:-1:exon
so has part: feature:305153-305311:-1:exon
so has part: feature:304863-304922:-1:exon
so has part: feature:304387-304546:-1:exon
so has part: feature:304197-304287:-1:exon
so has part: feature:303548-303622:-1:exon
so has part: feature:303075-303213:-1:exon
so has part: feature:298922-302708:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:324288-324503:-1:exon

position:324288:-1
position: 324288
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:320682-320780:-1:exon

position:320682:-1
position: 320682
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:320780:-1
position: 320780
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:319941-320064:-1:exon

position:319941:-1
position: 319941
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:320064:-1
position: 320064
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:319110-319278:-1:exon

position:319110:-1
position: 319110
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:319278:-1
position: 319278
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:316670-316759:-1:exon

position:316670:-1
position: 316670
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:316759:-1
position: 316759
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:315509-315598:-1:exon

position:315509:-1
position: 315509
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:315598:-1
position: 315598
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:314557-314635:-1:exon

position:314557:-1
position: 314557
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:314635:-1
position: 314635
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:313983-314108:-1:exon

position:313983:-1
position: 313983
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:314108:-1
position: 314108
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:313453-313521:-1:exon

position:313453:-1
position: 313453
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:313521:-1
position: 313521
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:311583-311791:-1:exon

position:311583:-1
position: 311583
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:311791:-1
position: 311791
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:311303-311440:-1:exon

position:311303:-1
position: 311303
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:311440:-1
position: 311440
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:309502-310203:-1:exon

position:309502:-1
position: 309502
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:310203:-1
position: 310203
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:307513-307682:-1:exon

position:307513:-1
position: 307513
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:307682:-1
position: 307682
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:307149-307224:-1:exon

position:307149:-1
position: 307149
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:307224:-1
position: 307224
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:306301-306476:-1:exon

position:306301:-1
position: 306301
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:306476:-1
position: 306476
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:305153-305311:-1:exon

position:305153:-1
position: 305153
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:305311:-1
position: 305311
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:304863-304922:-1:exon

position:304863:-1
position: 304863
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:304922:-1
position: 304922
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:304387-304546:-1:exon

position:304387:-1
position: 304387
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:304546:-1
position: 304546
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:304197-304287:-1:exon

position:304197:-1
position: 304197
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:304287:-1
position: 304287
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:303548-303622:-1:exon

position:303548:-1
position: 303548
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:303622:-1
position: 303622
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:303075-303213:-1:exon

position:303075:-1
position: 303075
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:303213:-1
position: 303213
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 22
SIO_000628: feature:298922-302708:-1:exon

position:302708:-1
position: 302708
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

SMG5
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8839
gene: SMG5
product: SMG5 nonsense mediated mRNA decay factor, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 126 samples with support for all annotated introns
transcript id: XM_027444519.2
SIO_010081: SMG5
subclass of: SO_0000673
so part of: SMG5
location: complement(join(298922..302708,303075..303213,303548..303622,304197..304287,304387..304546,304863..304922,305153..305311,306301..306476,307149..307224,307513..307682,309502..310203,311303..311440,311583..311791,313453..313521,313983..314108,314557..314635,315509..315598,316670..316759,319121..319275))
location: region:298922-319275:-1
so has part: feature:319121-319275:-1:exon
so has part: feature:316670-316759:-1:exon
so has part: feature:315509-315598:-1:exon
so has part: feature:314557-314635:-1:exon
so has part: feature:313983-314108:-1:exon
so has part: feature:313453-313521:-1:exon
so has part: feature:311583-311791:-1:exon
so has part: feature:311303-311440:-1:exon
so has part: feature:309502-310203:-1:exon
so has part: feature:307513-307682:-1:exon
so has part: feature:307149-307224:-1:exon
so has part: feature:306301-306476:-1:exon
so has part: feature:305153-305311:-1:exon
so has part: feature:304863-304922:-1:exon
so has part: feature:304387-304546:-1:exon
so has part: feature:304197-304287:-1:exon
so has part: feature:303548-303622:-1:exon
so has part: feature:303075-303213:-1:exon
so has part: feature:298922-302708:-1:exon

position:319275:-1
position: 319275
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:319121-319275:-1:exon

position:319121:-1
position: 319121
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:316670-316759:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:315509-315598:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:314557-314635:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:313983-314108:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:313453-313521:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:311583-311791:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:311303-311440:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:309502-310203:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:307513-307682:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:307149-307224:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:306301-306476:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:305153-305311:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:304863-304922:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:304387-304546:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:304197-304287:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:303548-303622:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:303075-303213:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:298922-302708:-1:exon

SMG5
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8839
gene: SMG5
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protein SMG5 isoform X2
translation: MSQGGGAGGESGEPEAKVLHTKRLYRAVVEAVHRLDLILGNKAAYQEVFKPENISLRNKLRELCVKLMFLHPVDYGRKAEELLWRKVYYEVIQLIKTNKKHIHSRSTLECAYRTHLVAGIGFYQHLLLYIQSHYQLELQCCIDWTHVTDPSNRLVLGCKKPVSASEKEMEWAQMACHRCLVYLGDLARYQNELAGVDTELLAERFYYQALSVAPQIGMPFNQLGTLAGSKYYNVEATYCYLRCIQSEVSFEGAYGNLKRLYDKAAKMYHQLKKCETRKLSPSKKRCKDIKRLLVSFMYLQSLLQPKSSSLDSELTSLCQSVLEDFNLCLFYLPSPPNLSSTSEDEEEYESGYSFLPDLLIFRMVIICFMSVHSLKRAGSKQYSAAIAFTLALFSHLINHVNMRLQAELEEGENPVPAFQNDGTDDQEPREPLNSIEKEAEAELANHQPKEEQRKNDCKKSKKYSRLSCLRRRRHPQKVDESDLSEGFDSDSSQGSTKGSDGSESGSEKSDEEAEAAFDVETDSDMNSQESRSDLEDMEDEPGEEGSSRGKSGPKEALKNCVDGSGLGDSKIPSISKTETPDSAVNGPVSLSTNDASIASNLQAMSTQLFQTKRCFRLAPTFSNILLKPNCEPAVLKDGLDTKPCVNGDLEKPSLAEQDDVSDSEESISSNKSCRNERSLQEKLEIVTNEGLLLTVKVFLDWLRTNTDLIIMCAQSSQSLWNRLSVLLNLLPSAADLQESGLDLCNEVKDMLSGAELPDLHTNLLLPEDVALRNLPPLKNAHKRFNFEQDRPIFSAVEESVVRICCIRSFGHFITRLQGSILQFNSELGIFISIAQSEQDNLLHQAQAQFHMAAEEARRNRLMRDMAQLRLQLEVSQLEGSLQQPKAQSAMSPYLVPDTQALCQHLAVVKQLATSGRFIIIIPRIVIDGLDFLKKDNAGARDSIRYLEAEFKKGNRYIRCQKDVGKSFERHKLKRQDLDAWNLYKILDSCKQLTVSQGNGEDDTTGMVTIITGFQLEDPSTLSAPMQSAIQAATSASVEIKNVLEFYKQWKEMG
SIO_010081: SMG5
subclass of: SO_0000673
so part of: SMG5
location: complement(join(302625..302708,303075..303213,303548..303622,304197..304287,304387..304546,304863..304922,305153..305311,306301..306476,307149..307224,307513..307682,309502..310203,311303..311440,311583..311791,313453..313521,313983..314108,314557..314635,315509..315598,316670..316759,319110..319278,319941..320064,320682..320780,324288..324364))
location: region:302625-324364:-1
so has part: feature:324288-324364:-1:exon
so has part: feature:320682-320780:-1:exon
so has part: feature:319941-320064:-1:exon
so has part: feature:319110-319278:-1:exon
so has part: feature:316670-316759:-1:exon
so has part: feature:315509-315598:-1:exon
so has part: feature:314557-314635:-1:exon
so has part: feature:313983-314108:-1:exon
so has part: feature:313453-313521:-1:exon
so has part: feature:311583-311791:-1:exon
so has part: feature:311303-311440:-1:exon
so has part: feature:309502-310203:-1:exon
so has part: feature:307513-307682:-1:exon
so has part: feature:307149-307224:-1:exon
so has part: feature:306301-306476:-1:exon
so has part: feature:305153-305311:-1:exon
so has part: feature:304863-304922:-1:exon
so has part: feature:304387-304546:-1:exon
so has part: feature:304197-304287:-1:exon
so has part: feature:303548-303622:-1:exon
so has part: feature:303075-303213:-1:exon
so has part: feature:302625-302708:-1:exon

XP_038023766.1
type: Protein
SIO_000068: ncbiprotein

position:302625:-1
position: 302625
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:324364:-1
position: 324364
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:324288-324364:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:320682-320780:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:319941-320064:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:319110-319278:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:316670-316759:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:315509-315598:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:314557-314635:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:313983-314108:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:313453-313521:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:311583-311791:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:311303-311440:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:309502-310203:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:307513-307682:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:307149-307224:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:306301-306476:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:305153-305311:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:304863-304922:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:304387-304546:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:304197-304287:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:303548-303622:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:303075-303213:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:302625-302708:-1:exon

SMG5
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8839
gene: SMG5
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protein SMG5 isoform X1
translation: MSQIPLIGCKKPVSASEKEMEWAQMACHRCLVYLGDLARYQNELAGVDTELLAERFYYQALSVAPQIGMPFNQLGTLAGSKYYNVEATYCYLRCIQSEVSFEGAYGNLKRLYDKAAKMYHQLKKCETRKLSPSKKRCKDIKRLLVSFMYLQSLLQPKSSSLDSELTSLCQSVLEDFNLCLFYLPSPPNLSSTSEDEEEYESGYSFLPDLLIFRMVIICFMSVHSLKRAGSKQYSAAIAFTLALFSHLINHVNMRLQAELEEGENPVPAFQNDGTDDQEPREPLNSIEKEAEAELANHQPKEEQRKNDCKKSKKYSRLSCLRRRRHPQKVDESDLSEGFDSDSSQGSTKGSDGSESGSEKSDEEAEAAFDVETDSDMNSQESRSDLEDMEDEPGEEGSSRGKSGPKEALKNCVDGSGLGDSKIPSISKTETPDSAVNGPVSLSTNDASIASNLQAMSTQLFQTKRCFRLAPTFSNILLKPNCEPAVLKDGLDTKPCVNGDLEKPSLAEQDDVSDSEESISSNKSCRNERSLQEKLEIVTNEGLLLTVKVFLDWLRTNTDLIIMCAQSSQSLWNRLSVLLNLLPSAADLQESGLDLCNEVKDMLSGAELPDLHTNLLLPEDVALRNLPPLKNAHKRFNFEQDRPIFSAVEESVVRICCIRSFGHFITRLQGSILQFNSELGIFISIAQSEQDNLLHQAQAQFHMAAEEARRNRLMRDMAQLRLQLEVSQLEGSLQQPKAQSAMSPYLVPDTQALCQHLAVVKQLATSGRFIIIIPRIVIDGLDFLKKDNAGARDSIRYLEAEFKKGNRYIRCQKDVGKSFERHKLKRQDLDAWNLYKILDSCKQLTVSQGNGEDDTTGMVTIITGFQLEDPSTLSAPMQSAIQAATSASVEIKNVLEFYKQWKEMG
SIO_010081: SMG5
subclass of: SO_0000673
so part of: SMG5
location: complement(join(302625..302708,303075..303213,303548..303622,304197..304287,304387..304546,304863..304922,305153..305311,306301..306476,307149..307224,307513..307682,309502..310203,311303..311440,311583..311791,313453..313521,313983..314108,314557..314635,315509..315598,316670..316759,319121..319142))
location: region:302625-319142:-1
so has part: feature:319121-319142:-1:exon
so has part: feature:316670-316759:-1:exon
so has part: feature:315509-315598:-1:exon
so has part: feature:314557-314635:-1:exon
so has part: feature:313983-314108:-1:exon
so has part: feature:313453-313521:-1:exon
so has part: feature:311583-311791:-1:exon
so has part: feature:311303-311440:-1:exon
so has part: feature:309502-310203:-1:exon
so has part: feature:307513-307682:-1:exon
so has part: feature:307149-307224:-1:exon
so has part: feature:306301-306476:-1:exon
so has part: feature:305153-305311:-1:exon
so has part: feature:304863-304922:-1:exon
so has part: feature:304387-304546:-1:exon
so has part: feature:304197-304287:-1:exon
so has part: feature:303548-303622:-1:exon
so has part: feature:303075-303213:-1:exon
so has part: feature:302625-302708:-1:exon

XP_027300320.2
type: Protein
SIO_000068: ncbiprotein

position:319142:-1
position: 319142
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:319121-319142:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:316670-316759:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:315509-315598:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:314557-314635:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:313983-314108:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:313453-313521:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:311583-311791:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:311303-311440:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:309502-310203:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:307513-307682:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:307149-307224:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:306301-306476:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:305153-305311:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:304863-304922:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:304387-304546:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:304197-304287:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:303548-303622:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:303075-303213:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:302625-302708:-1:exon

LOC113839874
type: Gene
subclass of: SO_0000704
RO_0002162: 8839
gene: LOC113839874
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 326514..328558
location: region:326514-328558:1
so has part: feature:326514-328558:1:exon
subclass of: SO_0000010

113839874
type: Gene
SIO_000068: ncbigene

position:326514:1
position: 326514
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:328558:1
position: 328558
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:326514-328558:1:exon

LOC113839874
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8839
gene: LOC113839874
product: HCLS1-associated protein X-1-like
exception: unclassified transcription discrepancy
note: The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: deleted 2 bases in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 78% coverage of the annotated genomic feature by RNAseq alignments, including 108 samples with support for all annotated introns
transcript id: XM_038167709.1
SIO_010081: LOC113839874
subclass of: SO_0000673
so part of: LOC113839874
location: join(326514..326581,326704..326912,326986..327100,327206..327251,327335..327450,327955..328106,328190..328334,328429..328558)
location: region:326514-328558:1
so has part: feature:326514-326581:1:exon
so has part: feature:326704-326912:1:exon
so has part: feature:326986-327100:1:exon
so has part: feature:327206-327251:1:exon
so has part: feature:327335-327450:1:exon
so has part: feature:327955-328106:1:exon
so has part: feature:328190-328334:1:exon
so has part: feature:328429-328558:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:326514-326581:1:exon

position:326581:1
position: 326581
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:326704-326912:1:exon

position:326704:1
position: 326704
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:326912:1
position: 326912
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:326986-327100:1:exon

position:326986:1
position: 326986
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:327100:1
position: 327100
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:327206-327251:1:exon

position:327206:1
position: 327206
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:327251:1
position: 327251
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:327335-327450:1:exon

position:327335:1
position: 327335
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:327450:1
position: 327450
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:327955-328106:1:exon

position:327955:1
position: 327955
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:328106:1
position: 328106
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:328190-328334:1:exon

position:328190:1
position: 328190
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:328334:1
position: 328334
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:328429-328558:1:exon

position:328429:1
position: 328429
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC113839874
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8839
gene: LOC113839874
exception: unclassified translation discrepancy
note: The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: deleted 2 bases in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: LOW QUALITY PROTEIN: HCLS1-associated protein X-1-like
translation: MSFYDAFRGFFGLPGGRRPREPLFGGAPRDEDEDEAAEGPPRPPPPPDGFSFGRFGPGGAFEELLRDAAELLGAFGGAWVRAPPGHSPPCPAPGPGRPLRDSMLKHPDGPEGSRDPARPWSLLPELEDARPAPPERREDRDLDSEVSSVGLGTILRPHEPQPRSFFQSVSVTKVTLPDGAVEERRTVQDSHGRRETTVTLRRGSQAFVSTTTEDGQSKEHREELLGRG
SIO_010081: LOC113839874
subclass of: SO_0000673
so part of: LOC113839874
location: join(326529..326581,326704..326912,326986..327100,327206..327251,327335..327450,327955..328104)
location: region:326529-328104:1
so has part: feature:326529-326581:1:exon
so has part: feature:326704-326912:1:exon
so has part: feature:326986-327100:1:exon
so has part: feature:327206-327251:1:exon
so has part: feature:327335-327450:1:exon
so has part: feature:327955-328104:1:exon

XP_038023637.1
type: Protein
SIO_000068: ncbiprotein

position:326529:1
position: 326529
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:328104:1
position: 328104
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:326529-326581:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:326704-326912:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:326986-327100:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:327206-327251:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:327335-327450:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:327955-328104:1:exon

HORMAD1
type: Gene
subclass of: SO_0000704
RO_0002162: 8839
gene: HORMAD1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 333413..343789
location: region:333413-343789:1
so has part: feature:333413-343789:1:exon
subclass of: SO_0000010

101802586
type: Gene
SIO_000068: ncbigene

position:333413:1
position: 333413
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:343789:1
position: 343789
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:333413-343789:1:exon

HORMAD1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8839
gene: HORMAD1
product: HORMA domain containing 1, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 8 samples with support for all annotated introns
transcript id: XM_038167905.1
SIO_010081: HORMAD1
subclass of: SO_0000673
so part of: HORMAD1
location: join(333413..333509,334207..334261,334604..334748,335080..335143,335691..335726,336792..336828,337074..337094,337192..337218,337689..337756,338966..339117,339434..339687,340497..340563,341562..341638,342131..342214,342771..343789)
location: region:333413-343789:1
so has part: feature:333413-333509:1:exon
so has part: feature:334207-334261:1:exon
so has part: feature:334604-334748:1:exon
so has part: feature:335080-335143:1:exon
so has part: feature:335691-335726:1:exon
so has part: feature:336792-336828:1:exon
so has part: feature:337074-337094:1:exon
so has part: feature:337192-337218:1:exon
so has part: feature:337689-337756:1:exon
so has part: feature:338966-339117:1:exon
so has part: feature:339434-339687:1:exon
so has part: feature:340497-340563:1:exon
so has part: feature:341562-341638:1:exon
so has part: feature:342131-342214:1:exon
so has part: feature:342771-343789:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:333413-333509:1:exon

position:333509:1
position: 333509
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:334207-334261:1:exon

position:334207:1
position: 334207
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:334261:1
position: 334261
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:334604-334748:1:exon

position:334604:1
position: 334604
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:334748:1
position: 334748
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:335080-335143:1:exon

position:335080:1
position: 335080
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:335143:1
position: 335143
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:335691-335726:1:exon

position:335691:1
position: 335691
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:335726:1
position: 335726
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:336792-336828:1:exon

position:336792:1
position: 336792
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:336828:1
position: 336828
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:337074-337094:1:exon

position:337074:1
position: 337074
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:337094:1
position: 337094
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:337192-337218:1:exon

position:337192:1
position: 337192
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:337218:1
position: 337218
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:337689-337756:1:exon

position:337689:1
position: 337689
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:337756:1
position: 337756
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:338966-339117:1:exon

position:338966:1
position: 338966
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:339117:1
position: 339117
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:339434-339687:1:exon

position:339434:1
position: 339434
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:339687:1
position: 339687
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:340497-340563:1:exon

position:340497:1
position: 340497
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:340563:1
position: 340563
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:341562-341638:1:exon

position:341562:1
position: 341562
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:341638:1
position: 341638
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:342131-342214:1:exon

position:342131:1
position: 342131
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:342214:1
position: 342214
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:342771-343789:1:exon

position:342771:1
position: 342771
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

HORMAD1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8839
gene: HORMAD1
product: HORMA domain containing 1, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 8 samples with support for all annotated introns
transcript id: XM_038167904.1
SIO_010081: HORMAD1
subclass of: SO_0000673
so part of: HORMAD1
location: join(333415..333574,334207..334261,334604..334748,335080..335143,335691..335726,336792..336828,337074..337094,337192..337218,337689..337756,338966..339117,339434..339687,340497..340563,341562..341638,342131..342214,342771..343789)
location: region:333415-343789:1
so has part: feature:333415-333574:1:exon
so has part: feature:334207-334261:1:exon
so has part: feature:334604-334748:1:exon
so has part: feature:335080-335143:1:exon
so has part: feature:335691-335726:1:exon
so has part: feature:336792-336828:1:exon
so has part: feature:337074-337094:1:exon
so has part: feature:337192-337218:1:exon
so has part: feature:337689-337756:1:exon
so has part: feature:338966-339117:1:exon
so has part: feature:339434-339687:1:exon
so has part: feature:340497-340563:1:exon
so has part: feature:341562-341638:1:exon
so has part: feature:342131-342214:1:exon
so has part: feature:342771-343789:1:exon

position:333415:1
position: 333415
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:333415-333574:1:exon

position:333574:1
position: 333574
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:334207-334261:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:334604-334748:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:335080-335143:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:335691-335726:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:336792-336828:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:337074-337094:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:337192-337218:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:337689-337756:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:338966-339117:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:339434-339687:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:340497-340563:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:341562-341638:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:342131-342214:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:342771-343789:1:exon

HORMAD1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8839
gene: HORMAD1
product: HORMA domain containing 1, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 10 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 22 samples with support for all annotated introns
transcript id: XM_038167906.1
SIO_010081: HORMAD1
subclass of: SO_0000673
so part of: HORMAD1
location: join(333417..333574,334207..334261,334604..334748,335080..335143,336792..336828,337074..337094,337192..337218,337689..337756,338966..339117,339434..339687,340497..340563,341562..341638,342131..342214,342771..343789)
location: region:333417-343789:1
so has part: feature:333417-333574:1:exon
so has part: feature:334207-334261:1:exon
so has part: feature:334604-334748:1:exon
so has part: feature:335080-335143:1:exon
so has part: feature:336792-336828:1:exon
so has part: feature:337074-337094:1:exon
so has part: feature:337192-337218:1:exon
so has part: feature:337689-337756:1:exon
so has part: feature:338966-339117:1:exon
so has part: feature:339434-339687:1:exon
so has part: feature:340497-340563:1:exon
so has part: feature:341562-341638:1:exon
so has part: feature:342131-342214:1:exon
so has part: feature:342771-343789:1:exon

position:333417:1
position: 333417
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:333417-333574:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:334207-334261:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:334604-334748:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:335080-335143:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:336792-336828:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:337074-337094:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:337192-337218:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:337689-337756:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:338966-339117:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:339434-339687:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:340497-340563:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:341562-341638:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:342131-342214:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:342771-343789:1:exon

HORMAD1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8839
gene: HORMAD1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: HORMA domain-containing protein 1 isoform X2
translation: MATAQKQKNCTSAVVFPNKITTEQQSLTLVKRLLAVAVSCITYLRGIFPESAYGTRYLDDLCVKILREDKNCPGSTQLVKWLVPGCPPCCLERMLGCYDALQKKYLRMIVLAVYTHPEDPQTITECYHFKFKYTHNGPLLNFSSKSKGSDSPIACADTKKASILLIRKIYVLMQNLGPLPNDVCLTMKLFYYDEVTPPDYQPPGFKEGECEGMIFEGEPMHLSMGEVPTPFHMLKVKVTTDKQRMENADESILKQGDTDQPLQVLRVDRDDPEENQHMDEDPVLDNKVEDDDNRVNTLEAQEPGVPGGGDEVTKAGENRSVYVSNRQVDHLASKTSELNMSESRTRSGKIFQTYIPEPSSSQDVLPKRRKISEPKEQF
SIO_010081: HORMAD1
subclass of: SO_0000673
so part of: HORMAD1
location: join(334229..334261,334604..334748,335080..335143,335691..335726,336792..336828,337074..337094,337192..337218,337689..337756,338966..339117,339434..339687,340497..340563,341562..341638,342131..342214,342771..342842)
location: region:334229-342842:1
so has part: feature:334229-334261:1:exon
so has part: feature:334604-334748:1:exon
so has part: feature:335080-335143:1:exon
so has part: feature:335691-335726:1:exon
so has part: feature:336792-336828:1:exon
so has part: feature:337074-337094:1:exon
so has part: feature:337192-337218:1:exon
so has part: feature:337689-337756:1:exon
so has part: feature:338966-339117:1:exon
so has part: feature:339434-339687:1:exon
so has part: feature:340497-340563:1:exon
so has part: feature:341562-341638:1:exon
so has part: feature:342131-342214:1:exon
so has part: feature:342771-342842:1:exon

XP_038023832.1
type: Protein
SIO_000068: ncbiprotein

position:334229:1
position: 334229
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:342842:1
position: 342842
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:334229-334261:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:334604-334748:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:335080-335143:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:335691-335726:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:336792-336828:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:337074-337094:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:337192-337218:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:337689-337756:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:338966-339117:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:339434-339687:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:340497-340563:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:341562-341638:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:342131-342214:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:342771-342842:1:exon

HORMAD1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8839
gene: HORMAD1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: HORMA domain-containing protein 1 isoform X2
translation: MATAQKQKNCTSAVVFPNKITTEQQSLTLVKRLLAVAVSCITYLRGIFPESAYGTRYLDDLCVKILREDKNCPGSTQLVKWLVPGCPPCCLERMLGCYDALQKKYLRMIVLAVYTHPEDPQTITECYHFKFKYTHNGPLLNFSSKSKGSDSPIACADTKKASILLIRKIYVLMQNLGPLPNDVCLTMKLFYYDEVTPPDYQPPGFKEGECEGMIFEGEPMHLSMGEVPTPFHMLKVKVTTDKQRMENADESILKQGDTDQPLQVLRVDRDDPEENQHMDEDPVLDNKVEDDDNRVNTLEAQEPGVPGGGDEVTKAGENRSVYVSNRQVDHLASKTSELNMSESRTRSGKIFQTYIPEPSSSQDVLPKRRKISEPKEQF
SIO_010081: HORMAD1
subclass of: SO_0000673
so part of: HORMAD1
location: join(334229..334261,334604..334748,335080..335143,335691..335726,336792..336828,337074..337094,337192..337218,337689..337756,338966..339117,339434..339687,340497..340563,341562..341638,342131..342214,342771..342842)
location: region:334229-342842:1
so has part: feature:334229-334261:1:exon
so has part: feature:334604-334748:1:exon
so has part: feature:335080-335143:1:exon
so has part: feature:335691-335726:1:exon
so has part: feature:336792-336828:1:exon
so has part: feature:337074-337094:1:exon
so has part: feature:337192-337218:1:exon
so has part: feature:337689-337756:1:exon
so has part: feature:338966-339117:1:exon
so has part: feature:339434-339687:1:exon
so has part: feature:340497-340563:1:exon
so has part: feature:341562-341638:1:exon
so has part: feature:342131-342214:1:exon
so has part: feature:342771-342842:1:exon

XP_038023833.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:334229-334261:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:334604-334748:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:335080-335143:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:335691-335726:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:336792-336828:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:337074-337094:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:337192-337218:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:337689-337756:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:338966-339117:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:339434-339687:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:340497-340563:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:341562-341638:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:342131-342214:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:342771-342842:1:exon

HORMAD1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8839
gene: HORMAD1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: HORMA domain-containing protein 1 isoform X3
translation: MATAQKQKNCTSAVVFPNKITTEQQSLTLVKRLLAVAVSCITYLRGIFPESAYGTRYLDDLCVKILREDKNCPGSTQLVKWMLGCYDALQKKYLRMIVLAVYTHPEDPQTITECYHFKFKYTHNGPLLNFSSKSKGSDSPIACADTKKASILLIRKIYVLMQNLGPLPNDVCLTMKLFYYDEVTPPDYQPPGFKEGECEGMIFEGEPMHLSMGEVPTPFHMLKVKVTTDKQRMENADESILKQGDTDQPLQVLRVDRDDPEENQHMDEDPVLDNKVEDDDNRVNTLEAQEPGVPGGGDEVTKAGENRSVYVSNRQVDHLASKTSELNMSESRTRSGKIFQTYIPEPSSSQDVLPKRRKISEPKEQF
SIO_010081: HORMAD1
subclass of: SO_0000673
so part of: HORMAD1
location: join(334229..334261,334604..334748,335080..335143,336792..336828,337074..337094,337192..337218,337689..337756,338966..339117,339434..339687,340497..340563,341562..341638,342131..342214,342771..342842)
location: region:334229-342842:1
so has part: feature:334229-334261:1:exon
so has part: feature:334604-334748:1:exon
so has part: feature:335080-335143:1:exon
so has part: feature:336792-336828:1:exon
so has part: feature:337074-337094:1:exon
so has part: feature:337192-337218:1:exon
so has part: feature:337689-337756:1:exon
so has part: feature:338966-339117:1:exon
so has part: feature:339434-339687:1:exon
so has part: feature:340497-340563:1:exon
so has part: feature:341562-341638:1:exon
so has part: feature:342131-342214:1:exon
so has part: feature:342771-342842:1:exon

XP_038023834.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:334229-334261:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:334604-334748:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:335080-335143:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:336792-336828:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:337074-337094:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:337192-337218:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:337689-337756:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:338966-339117:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:339434-339687:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:340497-340563:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:341562-341638:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:342131-342214:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:342771-342842:1:exon

HORMAD1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8839
gene: HORMAD1
product: HORMA domain containing 1, transcript variant X6
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 38 samples with support for all annotated introns
transcript id: XM_038167908.1
SIO_010081: HORMAD1
subclass of: SO_0000673
so part of: HORMAD1
location: join(334608..334748,335080..335143,337074..337094,337192..337218,337689..337756,338966..339117,339434..339687,340497..340563,341562..341638,342131..342214,342771..343789)
location: region:334608-343789:1
so has part: feature:334608-334748:1:exon
so has part: feature:335080-335143:1:exon
so has part: feature:337074-337094:1:exon
so has part: feature:337192-337218:1:exon
so has part: feature:337689-337756:1:exon
so has part: feature:338966-339117:1:exon
so has part: feature:339434-339687:1:exon
so has part: feature:340497-340563:1:exon
so has part: feature:341562-341638:1:exon
so has part: feature:342131-342214:1:exon
so has part: feature:342771-343789:1:exon

position:334608:1
position: 334608
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:334608-334748:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:335080-335143:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:337074-337094:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:337192-337218:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:337689-337756:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:338966-339117:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:339434-339687:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:340497-340563:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:341562-341638:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:342131-342214:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:342771-343789:1:exon

HORMAD1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8839
gene: HORMAD1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: HORMA domain-containing protein 1 isoform X5
translation: MRQNPEGRQELSWLYSAGEMLRMIVLAVYTHPEDPQTITECYHFKFKYTHNGPLLNFSSKSKGSDSPIACADTKKASILLIRKIYVLMQNLGPLPNDVCLTMKLFYYDEVTPPDYQPPGFKEGECEGMIFEGEPMHLSMGEVPTPFHMLKVKVTTDKQRMENADESILKQGDTDQPLQVLRVDRDDPEENQHMDEDPVLDNKVEDDDNRVNTLEAQEPGVPGGGDEVTKAGENRSVYVSNRQVDHLASKTSELNMSESRTRSGKIFQTYIPEPSSSQDVLPKRRKISEPKEQF
SIO_010081: HORMAD1
subclass of: SO_0000673
so part of: HORMAD1
location: join(335084..335143,337074..337094,337192..337218,337689..337756,338966..339117,339434..339687,340497..340563,341562..341638,342131..342214,342771..342842)
location: region:335084-342842:1
so has part: feature:335084-335143:1:exon
so has part: feature:337074-337094:1:exon
so has part: feature:337192-337218:1:exon
so has part: feature:337689-337756:1:exon
so has part: feature:338966-339117:1:exon
so has part: feature:339434-339687:1:exon
so has part: feature:340497-340563:1:exon
so has part: feature:341562-341638:1:exon
so has part: feature:342131-342214:1:exon
so has part: feature:342771-342842:1:exon

XP_038023836.1
type: Protein
SIO_000068: ncbiprotein

position:335084:1
position: 335084
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:335084-335143:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:337074-337094:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:337192-337218:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:337689-337756:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:338966-339117:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:339434-339687:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:340497-340563:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:341562-341638:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:342131-342214:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:342771-342842:1:exon

LOC119713804
type: Gene
subclass of: SO_0000704
RO_0002162: 8839
gene: LOC119713804
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(335115..338709)
location: region:335115-338709:-1
so has part: feature:335115-338709:-1:exon
subclass of: SO_0000011

119713804
type: Gene
SIO_000068: ncbigene

position:335115:-1
position: 335115
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:338709:-1
position: 338709
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:335115-338709:-1:exon

LOC119713804
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 8839
nc RNA class: lncRNA
gene: LOC119713804
product: uncharacterized LOC119713804
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XR_005260995.1
SIO_010081: LOC119713804
subclass of: SO_0000673
so part of: LOC119713804
location: complement(join(335115..336433,338152..338709))
location: region:335115-338709:-1
so has part: feature:338152-338709:-1:exon
so has part: feature:335115-336433:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:338152-338709:-1:exon

position:338152:-1
position: 338152
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:335115-336433:-1:exon

position:336433:-1
position: 336433
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

HORMAD1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8839
gene: HORMAD1
product: HORMA domain containing 1, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 17 samples with support for all annotated introns
transcript id: XM_038167903.1
SIO_010081: HORMAD1
subclass of: SO_0000673
so part of: HORMAD1
location: join(335409..335726,336792..336828,337074..337094,337192..337218,337689..337756,338966..339117,339434..339687,340497..340563,341562..341638,342131..342214,342771..343789)
location: region:335409-343789:1
so has part: feature:335409-335726:1:exon
so has part: feature:336792-336828:1:exon
so has part: feature:337074-337094:1:exon
so has part: feature:337192-337218:1:exon
so has part: feature:337689-337756:1:exon
so has part: feature:338966-339117:1:exon
so has part: feature:339434-339687:1:exon
so has part: feature:340497-340563:1:exon
so has part: feature:341562-341638:1:exon
so has part: feature:342131-342214:1:exon
so has part: feature:342771-343789:1:exon

position:335409:1
position: 335409
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:335409-335726:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:336792-336828:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:337074-337094:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:337192-337218:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:337689-337756:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:338966-339117:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:339434-339687:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:340497-340563:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:341562-341638:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:342131-342214:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:342771-343789:1:exon

HORMAD1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8839
gene: HORMAD1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: HORMA domain-containing protein 1 isoform X1
translation: MQKTQPAIPLWLGRGCSVPTKTEPVAVLHLVFEALALILCRKVVPWAFLFQTRVVSALLHVHPVECLSWDSRYLSFSFLFSTRLVPGCPPCCLERMLGCYDALQKKYLRMIVLAVYTHPEDPQTITECYHFKFKYTHNGPLLNFSSKSKGSDSPIACADTKKASILLIRKIYVLMQNLGPLPNDVCLTMKLFYYDEVTPPDYQPPGFKEGECEGMIFEGEPMHLSMGEVPTPFHMLKVKVTTDKQRMENADESILKQGDTDQPLQVLRVDRDDPEENQHMDEDPVLDNKVEDDDNRVNTLEAQEPGVPGGGDEVTKAGENRSVYVSNRQVDHLASKTSELNMSESRTRSGKIFQTYIPEPSSSQDVLPKRRKISEPKEQF
SIO_010081: HORMAD1
subclass of: SO_0000673
so part of: HORMAD1
location: join(335443..335726,336792..336828,337074..337094,337192..337218,337689..337756,338966..339117,339434..339687,340497..340563,341562..341638,342131..342214,342771..342842)
location: region:335443-342842:1
so has part: feature:335443-335726:1:exon
so has part: feature:336792-336828:1:exon
so has part: feature:337074-337094:1:exon
so has part: feature:337192-337218:1:exon
so has part: feature:337689-337756:1:exon
so has part: feature:338966-339117:1:exon
so has part: feature:339434-339687:1:exon
so has part: feature:340497-340563:1:exon
so has part: feature:341562-341638:1:exon
so has part: feature:342131-342214:1:exon
so has part: feature:342771-342842:1:exon

XP_038023831.1
type: Protein
SIO_000068: ncbiprotein

position:335443:1
position: 335443
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:335443-335726:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:336792-336828:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:337074-337094:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:337192-337218:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:337689-337756:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:338966-339117:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:339434-339687:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:340497-340563:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:341562-341638:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:342131-342214:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:342771-342842:1:exon

HORMAD1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8839
gene: HORMAD1
product: HORMA domain containing 1, transcript variant X5
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 14 samples with support for all annotated introns
transcript id: XM_038167907.1
SIO_010081: HORMAD1
subclass of: SO_0000673
so part of: HORMAD1
location: join(336201..336450,337074..337094,337192..337218,337689..337756,338966..339117,339434..339687,340497..340563,341562..341638,342131..342214,342771..343789)
location: region:336201-343789:1
so has part: feature:336201-336450:1:exon
so has part: feature:337074-337094:1:exon
so has part: feature:337192-337218:1:exon
so has part: feature:337689-337756:1:exon
so has part: feature:338966-339117:1:exon
so has part: feature:339434-339687:1:exon
so has part: feature:340497-340563:1:exon
so has part: feature:341562-341638:1:exon
so has part: feature:342131-342214:1:exon
so has part: feature:342771-343789:1:exon

position:336201:1
position: 336201
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:336201-336450:1:exon

position:336450:1
position: 336450
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:337074-337094:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:337192-337218:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:337689-337756:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:338966-339117:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:339434-339687:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:340497-340563:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:341562-341638:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:342131-342214:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:342771-343789:1:exon

HORMAD1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8839
gene: HORMAD1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: HORMA domain-containing protein 1 isoform X4
translation: MLSCDVGGVTGSLRWEPSLSMQGQWHSSLRMLARACASPLLLTGEQSFVTQHRGRAKSNACSLTTFKRTAGAITLRMIVLAVYTHPEDPQTITECYHFKFKYTHNGPLLNFSSKSKGSDSPIACADTKKASILLIRKIYVLMQNLGPLPNDVCLTMKLFYYDEVTPPDYQPPGFKEGECEGMIFEGEPMHLSMGEVPTPFHMLKVKVTTDKQRMENADESILKQGDTDQPLQVLRVDRDDPEENQHMDEDPVLDNKVEDDDNRVNTLEAQEPGVPGGGDEVTKAGENRSVYVSNRQVDHLASKTSELNMSESRTRSGKIFQTYIPEPSSSQDVLPKRRKISEPKEQF
SIO_010081: HORMAD1
subclass of: SO_0000673
so part of: HORMAD1
location: join(336229..336450,337074..337094,337192..337218,337689..337756,338966..339117,339434..339687,340497..340563,341562..341638,342131..342214,342771..342842)
location: region:336229-342842:1
so has part: feature:336229-336450:1:exon
so has part: feature:337074-337094:1:exon
so has part: feature:337192-337218:1:exon
so has part: feature:337689-337756:1:exon
so has part: feature:338966-339117:1:exon
so has part: feature:339434-339687:1:exon
so has part: feature:340497-340563:1:exon
so has part: feature:341562-341638:1:exon
so has part: feature:342131-342214:1:exon
so has part: feature:342771-342842:1:exon

XP_038023835.1
type: Protein
SIO_000068: ncbiprotein

position:336229:1
position: 336229
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:336229-336450:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:337074-337094:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:337192-337218:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:337689-337756:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:338966-339117:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:339434-339687:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:340497-340563:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:341562-341638:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:342131-342214:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:342771-342842:1:exon

GOLPH3L
type: Gene
subclass of: SO_0000704
RO_0002162: 8839
gene: GOLPH3L
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 344716..349157
location: region:344716-349157:1
so has part: feature:344716-349157:1:exon
subclass of: SO_0000010

101803467
type: Gene
SIO_000068: ncbigene

position:344716:1
position: 344716
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:349157:1
position: 349157
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:344716-349157:1:exon

GOLPH3L
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8839
gene: GOLPH3L
product: golgi phosphoprotein 3 like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 9 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 126 samples with support for all annotated introns
transcript id: XM_005030002.5
SIO_010081: GOLPH3L
subclass of: SO_0000673
so part of: GOLPH3L
location: join(344716..345372,347317..347448,347613..347727,348217..349157)
location: region:344716-349157:1
so has part: feature:344716-345372:1:exon
so has part: feature:347317-347448:1:exon
so has part: feature:347613-347727:1:exon
so has part: feature:348217-349157:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:344716-345372:1:exon

position:345372:1
position: 345372
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:347317-347448:1:exon

position:347317:1
position: 347317
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:347448:1
position: 347448
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:347613-347727:1:exon

position:347613:1
position: 347613
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:347727:1
position: 347727
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:348217-349157:1:exon

position:348217:1
position: 348217
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

GOLPH3L
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8839
gene: GOLPH3L
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: Golgi phosphoprotein 3-like
translation: MTTLTHRGRRSEAGGSVGKRLDDEEEERDPEEDDDSKGTRLTLMEEVLLLGLKDKQGYTSFWNDCISSGLRGGILIELALRGRIQLEPLTARKKRLLDRKVHLKSDAPTGDILLDETLRHIKATEPAETVQTWIELLTGETWNPFKLQYQLRNVRERIAKNLVEKGILTTEKQNFLLFDMTTHPVSNAAEKQRLLKRLQEGVLERWAGDPHRMDRRTLALLVLAHSSDVLENAFSSLTDERYEAAMNRTKEVLDADPEVEAAKNRGTEMIWAILAAFNKA
SIO_010081: GOLPH3L
subclass of: SO_0000673
so part of: GOLPH3L
location: join(345205..345372,347317..347448,347613..347727,348217..348644)
location: region:345205-348644:1
so has part: feature:345205-345372:1:exon
so has part: feature:347317-347448:1:exon
so has part: feature:347613-347727:1:exon
so has part: feature:348217-348644:1:exon

XP_005030059.4
type: Protein
SIO_000068: ncbiprotein

position:345205:1
position: 345205
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:348644:1
position: 348644
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:345205-345372:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:347317-347448:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:347613-347727:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:348217-348644:1:exon

ENSA
type: Gene
subclass of: SO_0000704
RO_0002162: 8839
gene: ENSA
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 350265..352735
location: region:350265-352735:1
so has part: feature:350265-352735:1:exon
subclass of: SO_0000010

101803662
type: Gene
SIO_000068: ncbigene

position:350265:1
position: 350265
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:352735:1
position: 352735
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:350265-352735:1:exon

ENSA
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8839
gene: ENSA
product: endosulfine alpha
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 9 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 126 samples with support for all annotated introns
transcript id: XM_038167909.1
SIO_010081: ENSA
subclass of: SO_0000673
so part of: ENSA
location: join(350265..350439,350930..351055,351762..352735)
location: region:350265-352735:1
so has part: feature:350265-350439:1:exon
so has part: feature:350930-351055:1:exon
so has part: feature:351762-352735:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:350265-350439:1:exon

position:350439:1
position: 350439
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:350930-351055:1:exon

position:350930:1
position: 350930
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:351055:1
position: 351055
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:351762-352735:1:exon

position:351762:1
position: 351762
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

ENSA
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8839
gene: ENSA
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: alpha-endosulfine
translation: MAAPLGTGTRTEEPGQEKQDAQEKELAHPERAEEAKLKAKYPNLGQKPGGSDFLMKRLQKGQKYFDSGDYNMAKAKMKNKQLPSAGPDKNLVTGDHIPTPQDLPQRKSSLVTSKLAG
SIO_010081: ENSA
subclass of: SO_0000673
so part of: ENSA
location: join(350383..350439,350930..351055,351762..351932)
location: region:350383-351932:1
so has part: feature:350383-350439:1:exon
so has part: feature:350930-351055:1:exon
so has part: feature:351762-351932:1:exon

XP_038023837.1
type: Protein
SIO_000068: ncbiprotein

position:350383:1
position: 350383
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:351932:1
position: 351932
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:350383-350439:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:350930-351055:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:351762-351932:1:exon

MCL1
type: Gene
subclass of: SO_0000704
RO_0002162: 8839
gene: MCL1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 355730..360472
location: region:355730-360472:1
so has part: feature:355730-360472:1:exon
subclass of: SO_0000010

101803270
type: Gene
SIO_000068: ncbigene

position:355730:1
position: 355730
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:360472:1
position: 360472
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:355730-360472:1:exon

MCL1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8839
gene: MCL1
product: MCL1 apoptosis regulator, BCL2 family member
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 8 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 126 samples with support for all annotated introns
transcript id: XM_027444469.2
SIO_010081: MCL1
subclass of: SO_0000673
so part of: MCL1
location: join(355730..356327,358416..358663,359017..360472)
location: region:355730-360472:1
so has part: feature:355730-356327:1:exon
so has part: feature:358416-358663:1:exon
so has part: feature:359017-360472:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:355730-356327:1:exon

position:356327:1
position: 356327
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:358416-358663:1:exon

position:358416:1
position: 358416
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:358663:1
position: 358663
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:359017-360472:1:exon

position:359017:1
position: 359017
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

MCL1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8839
gene: MCL1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: induced myeloid leukemia cell differentiation protein Mcl-1
translation: MFALPRNALIGFNLYCGGGTGPGGGGGGGGPASPGGTPAPPSPSSPPPPLLSGPAAPSPFPAARGAPCSLLIGSAAAPRSLIGSAAPRSPPLWSPEEELDGCEPEAELGGPGGGGGGGGSLPGTPPELPADELRQDSLELILRYLREAAGETEPGLKKFLPGLLGRPGGAGDGVMEKALETLRRVGDGVLEKHELAFQGMLRKLEIKKEEDLQAVGEVAAHLFSDGVTNWGRVVTLISFGAFVARHLKSVKQEKSIGSLARIITDALVSSKREWLVSQGGWEGFVDFFRVEDLEGSIRNVLMAFAGVAGLGASLAYMIR
SIO_010081: MCL1
subclass of: SO_0000673
so part of: MCL1
location: join(355733..356327,358416..358663,359017..359133)
location: region:355733-359133:1
so has part: feature:355733-356327:1:exon
so has part: feature:358416-358663:1:exon
so has part: feature:359017-359133:1:exon

XP_027300270.2
type: Protein
SIO_000068: ncbiprotein

position:355733:1
position: 355733
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:359133:1
position: 359133
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:355733-356327:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:358416-358663:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:359017-359133:1:exon

LOC119713797
type: Gene
subclass of: SO_0000704
RO_0002162: 8839
gene: LOC119713797
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 360587..363039
location: region:360587-363039:1
so has part: feature:360587-363039:1:exon
subclass of: SO_0000010

119713797
type: Gene
SIO_000068: ncbigene

position:360587:1
position: 360587
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:363039:1
position: 363039
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:360587-363039:1:exon

LOC119713797
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8839
gene: LOC119713797
product: uncharacterized LOC119713797
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_038167849.1
SIO_010081: LOC119713797
subclass of: SO_0000673
so part of: LOC119713797
location: 360587..363039
location: region:360587-363039:1
so has part: feature:360587-363039:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:360587-363039:1:exon

LOC119713797
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8839
gene: LOC119713797
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: uncharacterized protein LOC119713797
translation: MNLPLLLGAFPSQGNSSEVGKIHERLPLRAAGAVEELQPPGSGHAGLGLGAQQRPPRLGGGPCSCSRAFGAAGRASASCFPSWKPRGRERSFPCPAAFRRSPAAFRERPRKYRGGGGGWGAGGEGPEGPGNRPRERGGPRGLRSWALRPRELLTGPGSSRGGPGAALGGGGARPGAGLGPGVGPTRPRPPPPLPWKRGTSGKGRGHAPSVPPAWAISARPRPATAPANGARSRDRFQEPAPIPPPPPRGAAALPPPLPHPPQTRARPRGERSRDGGRRGAGPAAPGGAGGKAAQSVLVAPTGGPEPILVFCVLYWWLKLVAQIPYWCPVLVSCTGVPYWCPMSCTGVPYWCPLLVSLTGVPYWCPVLVSHTGVPCPVLVSHTIIPYWCPILVSCTGVPYQCPLLVSHVLYWCLILVSCTGVLYWCPKLVSQTGVPYQCPLLVYHTGVPCWCFILVSILVSRTGVPYWCPILVSHTGVPYWCSLLVSHTGIPYWCPILVSRTGVPYWCPILVSHTGVPYWCSLLVSHTGIPYWCPILVSRTGVPYWCPILGHMGHNGGWGGCAGLPPDSPPQQRVLCSREPTGSTGRGCRALGGHWEHWWGVG
SIO_010081: LOC119713797
subclass of: SO_0000673
so part of: LOC119713797
location: 360624..362432
location: region:360624-362432:1
so has part: feature:360624-362432:1:exon

XP_038023777.1
type: Protein
SIO_000068: ncbiprotein

position:360624:1
position: 360624
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:362432:1
position: 362432
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:360624-362432:1:exon

ECM1
type: Gene
subclass of: SO_0000704
RO_0002162: 8839
gene: ECM1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(363166..368448)
location: region:363166-368448:-1
so has part: feature:363166-368448:-1:exon
subclass of: SO_0000010

113839877
type: Gene
SIO_000068: ncbigene

position:363166:-1
position: 363166
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:368448:-1
position: 368448
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:363166-368448:-1:exon

ECM1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8839
gene: ECM1
product: extracellular matrix protein 1, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 49 samples with support for all annotated introns
transcript id: XM_038167864.1
SIO_010081: ECM1
subclass of: SO_0000673
so part of: ECM1
location: complement(join(363166..363366,363486..363573,364454..364674,365561..365923,366356..366696,367158..367230,368298..368448))
location: region:363166-368448:-1
so has part: feature:368298-368448:-1:exon
so has part: feature:367158-367230:-1:exon
so has part: feature:366356-366696:-1:exon
so has part: feature:365561-365923:-1:exon
so has part: feature:364454-364674:-1:exon
so has part: feature:363486-363573:-1:exon
so has part: feature:363166-363366:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:368298-368448:-1:exon

position:368298:-1
position: 368298
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:367158-367230:-1:exon

position:367158:-1
position: 367158
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:367230:-1
position: 367230
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:366356-366696:-1:exon

position:366356:-1
position: 366356
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:366696:-1
position: 366696
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:365561-365923:-1:exon

position:365561:-1
position: 365561
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:365923:-1
position: 365923
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:364454-364674:-1:exon

position:364454:-1
position: 364454
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:364674:-1
position: 364674
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:363486-363573:-1:exon

position:363486:-1
position: 363486
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:363573:-1
position: 363573
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:363166-363366:-1:exon

position:363366:-1
position: 363366
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

ECM1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8839
gene: ECM1
product: extracellular matrix protein 1, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 107 samples with support for all annotated introns
transcript id: XM_038167863.1
SIO_010081: ECM1
subclass of: SO_0000673
so part of: ECM1
location: complement(join(363166..363366,363486..363573,364454..364674,365561..365923,366356..366696,367158..367233,368298..368387))
location: region:363166-368387:-1
so has part: feature:368298-368387:-1:exon
so has part: feature:367158-367233:-1:exon
so has part: feature:366356-366696:-1:exon
so has part: feature:365561-365923:-1:exon
so has part: feature:364454-364674:-1:exon
so has part: feature:363486-363573:-1:exon
so has part: feature:363166-363366:-1:exon

position:368387:-1
position: 368387
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:368298-368387:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:367158-367233:-1:exon

position:367233:-1
position: 367233
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:366356-366696:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:365561-365923:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:364454-364674:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:363486-363573:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:363166-363366:-1:exon

ECM1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8839
gene: ECM1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: extracellular matrix protein 1
translation: MQEEQDIELPPEVVSAAKNPPRPRAPSSQDSIDAIGHSSWGSTLEGFPPAWPLPDALAQHCRAPALFPRAPRPSLPPAAFAHLRRQVDALDAFWPRLDGCCRRPAPLPCARRAWTDVLNSFCDDEFGVKTRQFHCCRRHGAARRRCFTDATAAATAATHVTQVTEVTVWDVAHEPSFPPGEPTAANMDNICRLRGLRPGPRGLPGPRARFYTRLERDFGRCCDNGTGLACARAAWQKGLDRYCREEGAVKTGQHRCCQRGGGRARSRCFAAAAPHPAYDRELHNVSLARLGPAMLRTLCGPIRLLSKRRPVPELLEAVTSSCCALPPEEQSPCAEEQLSQSIDELCGSWRDPRGCCSRGGPERHRCFAERYLGGVPLAAAVPPPAPDHLQ
SIO_010081: ECM1
subclass of: SO_0000673
so part of: ECM1
location: complement(join(363205..363366,363486..363573,364454..364674,365561..365923,366356..366694))
location: region:363205-366694:-1
so has part: feature:366356-366694:-1:exon
so has part: feature:365561-365923:-1:exon
so has part: feature:364454-364674:-1:exon
so has part: feature:363486-363573:-1:exon
so has part: feature:363205-363366:-1:exon

XP_038023791.1
type: Protein
SIO_000068: ncbiprotein

position:363205:-1
position: 363205
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:366694:-1
position: 366694
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:366356-366694:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:365561-365923:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:364454-364674:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:363486-363573:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:363205-363366:-1:exon

ECM1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8839
gene: ECM1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: extracellular matrix protein 1
translation: MQEEQDIELPPEVVSAAKNPPRPRAPSSQDSIDAIGHSSWGSTLEGFPPAWPLPDALAQHCRAPALFPRAPRPSLPPAAFAHLRRQVDALDAFWPRLDGCCRRPAPLPCARRAWTDVLNSFCDDEFGVKTRQFHCCRRHGAARRRCFTDATAAATAATHVTQVTEVTVWDVAHEPSFPPGEPTAANMDNICRLRGLRPGPRGLPGPRARFYTRLERDFGRCCDNGTGLACARAAWQKGLDRYCREEGAVKTGQHRCCQRGGGRARSRCFAAAAPHPAYDRELHNVSLARLGPAMLRTLCGPIRLLSKRRPVPELLEAVTSSCCALPPEEQSPCAEEQLSQSIDELCGSWRDPRGCCSRGGPERHRCFAERYLGGVPLAAAVPPPAPDHLQ
SIO_010081: ECM1
subclass of: SO_0000673
so part of: ECM1
location: complement(join(363205..363366,363486..363573,364454..364674,365561..365923,366356..366694))
location: region:363205-366694:-1
so has part: feature:366356-366694:-1:exon
so has part: feature:365561-365923:-1:exon
so has part: feature:364454-364674:-1:exon
so has part: feature:363486-363573:-1:exon
so has part: feature:363205-363366:-1:exon

XP_038023792.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:366356-366694:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:365561-365923:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:364454-364674:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:363486-363573:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:363205-363366:-1:exon

TARS2
type: Gene
subclass of: SO_0000704
RO_0002162: 8839
gene: TARS2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(369719..375927)
location: region:369719-375927:-1
so has part: feature:369719-375927:-1:exon
subclass of: SO_0000010

113839886
type: Gene
SIO_000068: ncbigene

position:369719:-1
position: 369719
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:375927:-1
position: 375927
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:369719-375927:-1:exon

TARS2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8839
gene: TARS2
product: threonyl-tRNA synthetase 2, mitochondrial
exception: unclassified transcription discrepancy
note: The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: deleted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 9 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments, including 124 samples with support for all annotated introns
transcript id: XM_038167846.1
SIO_010081: TARS2
subclass of: SO_0000673
so part of: TARS2
location: complement(join(369719..369908,370739..370853,370959..371031,371468..371569,372003..372103,372249..372326,372744..372881,372971..373133,373235..373401,373687..373785,373905..374051,374154..374232,374356..374420,374513..374630,374720..374841,375218..375341,375498..375685,375777..375927))
location: region:369719-375927:-1
so has part: feature:375777-375927:-1:exon
so has part: feature:375498-375685:-1:exon
so has part: feature:375218-375341:-1:exon
so has part: feature:374720-374841:-1:exon
so has part: feature:374513-374630:-1:exon
so has part: feature:374356-374420:-1:exon
so has part: feature:374154-374232:-1:exon
so has part: feature:373905-374051:-1:exon
so has part: feature:373687-373785:-1:exon
so has part: feature:373235-373401:-1:exon
so has part: feature:372971-373133:-1:exon
so has part: feature:372744-372881:-1:exon
so has part: feature:372249-372326:-1:exon
so has part: feature:372003-372103:-1:exon
so has part: feature:371468-371569:-1:exon
so has part: feature:370959-371031:-1:exon
so has part: feature:370739-370853:-1:exon
so has part: feature:369719-369908:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:375777-375927:-1:exon

position:375777:-1
position: 375777
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:375498-375685:-1:exon

position:375498:-1
position: 375498
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:375685:-1
position: 375685
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:375218-375341:-1:exon

position:375218:-1
position: 375218
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:375341:-1
position: 375341
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:374720-374841:-1:exon

position:374720:-1
position: 374720
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:374841:-1
position: 374841
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:374513-374630:-1:exon

position:374513:-1
position: 374513
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:374630:-1
position: 374630
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:374356-374420:-1:exon

position:374356:-1
position: 374356
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:374420:-1
position: 374420
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:374154-374232:-1:exon

position:374154:-1
position: 374154
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:374232:-1
position: 374232
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:373905-374051:-1:exon

position:373905:-1
position: 373905
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:374051:-1
position: 374051
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:373687-373785:-1:exon

position:373687:-1
position: 373687
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:373785:-1
position: 373785
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:373235-373401:-1:exon

position:373235:-1
position: 373235
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:373401:-1
position: 373401
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:372971-373133:-1:exon

position:372971:-1
position: 372971
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:373133:-1
position: 373133
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:372744-372881:-1:exon

position:372744:-1
position: 372744
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:372881:-1
position: 372881
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:372249-372326:-1:exon

position:372249:-1
position: 372249
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:372326:-1
position: 372326
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:372003-372103:-1:exon

position:372003:-1
position: 372003
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:372103:-1
position: 372103
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:371468-371569:-1:exon

position:371468:-1
position: 371468
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:371569:-1
position: 371569
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:370959-371031:-1:exon

position:370959:-1
position: 370959
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:371031:-1
position: 371031
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:370739-370853:-1:exon

position:370739:-1
position: 370739
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:370853:-1
position: 370853
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:369719-369908:-1:exon

position:369908:-1
position: 369908
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

TARS2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8839
gene: TARS2
exception: unclassified translation discrepancy
note: The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: deleted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: LOW QUALITY PROTEIN: threonine--tRNA ligase, mitochondrial
translation: MPPALTGGRLLLGAAPRRYRPQVAERLRLFQQLQDARERRAGGDADGGSPPVGTPIRIALPGGRCLHGRALQTTPRQVAEQLGSGLAASVLVARVNGALRDLEQPLEDDTELELLDFAAPEGRAAFWQSSAFVLGAVLEQFYGATLCSTVATEDGFFCDAHMGDRTVQRSELPALEDACMAFARAQHRFERLEATREQLGELFKHNSFQLQRIQEEVTSPTATVYRCGPLLQLCRGPLLGHTGLIGALRVLTSSAAFWGDPTERRSLQRVAAVAFPSTQELEAWQRAQDAAALRDHRRIGREQELFFFHKLSPGSCFFLPRGAHIYNALVDFIRSEYQARGFCEVVTPNVFSPRLWELSGHWEHYSAHIFSFSAGAETLSLKPMNCPAHCLMFAHRPRSWRELPLRLADFGVLHRNEPPGSLTGLTRVRRFQQDDAHIFCTLEQLEAEIGGCLDFVRTVYATLGFSFRMALATRPDGFLGDAATWDRAEQQLERSLQDFGEPWELSPGDGAFYGPKIDIRIQDALGRHHQCGTIQLDFQMPERFGLEYASAAGGAMRPVLIHRAVLGSVERMVAVLAESCGGKWPLWLSPLQAMVIPQAPDCEGYAREVHAALRRDGVAADLDADAGSTLSRKIRRAQLAHYNFQLVVGRREQEQRTVSVRTRDNRRLGERRLPLLLQRLRELRAARVPNAEELF
SIO_010081: TARS2
subclass of: SO_0000673
so part of: TARS2
location: complement(join(369759..369908,370739..370853,370959..371031,371468..371569,372003..372103,372249..372326,372744..372881,372971..373133,373235..373401,373687..373785,373905..374051,374154..374232,374356..374420,374513..374630,374720..374841,375218..375341,375498..375685,375777..375836))
location: region:369759-375836:-1
so has part: feature:375777-375836:-1:exon
so has part: feature:375498-375685:-1:exon
so has part: feature:375218-375341:-1:exon
so has part: feature:374720-374841:-1:exon
so has part: feature:374513-374630:-1:exon
so has part: feature:374356-374420:-1:exon
so has part: feature:374154-374232:-1:exon
so has part: feature:373905-374051:-1:exon
so has part: feature:373687-373785:-1:exon
so has part: feature:373235-373401:-1:exon
so has part: feature:372971-373133:-1:exon
so has part: feature:372744-372881:-1:exon
so has part: feature:372249-372326:-1:exon
so has part: feature:372003-372103:-1:exon
so has part: feature:371468-371569:-1:exon
so has part: feature:370959-371031:-1:exon
so has part: feature:370739-370853:-1:exon
so has part: feature:369759-369908:-1:exon

XP_038023774.1
type: Protein
SIO_000068: ncbiprotein

position:369759:-1
position: 369759
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:375836:-1
position: 375836
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:375777-375836:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:375498-375685:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:375218-375341:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:374720-374841:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:374513-374630:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:374356-374420:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:374154-374232:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:373905-374051:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:373687-373785:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:373235-373401:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:372971-373133:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:372744-372881:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:372249-372326:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:372003-372103:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:371468-371569:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:370959-371031:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:370739-370853:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:369759-369908:-1:exon

LOC113839887
type: Gene
subclass of: SO_0000704
RO_0002162: 8839
gene: LOC113839887
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 375236..377841
location: region:375236-377841:1
so has part: feature:375236-377841:1:exon
subclass of: SO_0000011

113839887
type: Gene
SIO_000068: ncbigene

position:375236:1
position: 375236
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:377841:1
position: 377841
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:375236-377841:1:exon

LOC113839887
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 8839
nc RNA class: lncRNA
gene: LOC113839887
product: uncharacterized LOC113839887, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 17 samples with support for all annotated introns
transcript id: XR_005260992.1
SIO_010081: LOC113839887
subclass of: SO_0000673
so part of: LOC113839887
location: join(375236..375365,376264..376627,377277..377841)
location: region:375236-377841:1
so has part: feature:375236-375365:1:exon
so has part: feature:376264-376627:1:exon
so has part: feature:377277-377841:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:375236-375365:1:exon

position:375365:1
position: 375365
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:376264-376627:1:exon

position:376264:1
position: 376264
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:376627:1
position: 376627
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:377277-377841:1:exon

position:377277:1
position: 377277
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC113839887
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 8839
nc RNA class: lncRNA
gene: LOC113839887
product: uncharacterized LOC113839887, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 113 samples with support for all annotated introns
transcript id: XR_003492531.2
SIO_010081: LOC113839887
subclass of: SO_0000673
so part of: LOC113839887
location: join(376059..376627,377277..377841)
location: region:376059-377841:1
so has part: feature:376059-376627:1:exon
so has part: feature:377277-377841:1:exon

position:376059:1
position: 376059
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:376059-376627:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:377277-377841:1:exon

RPRD2
type: Gene
subclass of: SO_0000704
RO_0002162: 8839
gene: RPRD2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(377759..392818)
location: region:377759-392818:-1
so has part: feature:377759-392818:-1:exon
subclass of: SO_0000010

101804596
type: Gene
SIO_000068: ncbigene

position:377759:-1
position: 377759
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:392818:-1
position: 392818
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:377759-392818:-1:exon

RPRD2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8839
gene: RPRD2
product: regulation of nuclear pre-mRNA domain containing 2
exception: unclassified transcription discrepancy
note: The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: inserted 1 base in 1 codon; deleted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 126 samples with support for all annotated introns
transcript id: XM_027444600.2
SIO_010081: RPRD2
subclass of: SO_0000673
so part of: RPRD2
location: complement(join(377759..381748,382438..382641,382956..383231,383587..383872,384473..384648,385355..385481,386070..386122,387408..387485,388758..388858,390026..390155,392148..392818))
location: region:377759-392818:-1
so has part: feature:392148-392818:-1:exon
so has part: feature:390026-390155:-1:exon
so has part: feature:388758-388858:-1:exon
so has part: feature:387408-387485:-1:exon
so has part: feature:386070-386122:-1:exon
so has part: feature:385355-385481:-1:exon
so has part: feature:384473-384648:-1:exon
so has part: feature:383587-383872:-1:exon
so has part: feature:382956-383231:-1:exon
so has part: feature:382438-382641:-1:exon
so has part: feature:377759-381748:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:392148-392818:-1:exon

position:392148:-1
position: 392148
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:390026-390155:-1:exon

position:390026:-1
position: 390026
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:390155:-1
position: 390155
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:388758-388858:-1:exon

position:388758:-1
position: 388758
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:388858:-1
position: 388858
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:387408-387485:-1:exon

position:387408:-1
position: 387408
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:387485:-1
position: 387485
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:386070-386122:-1:exon

position:386070:-1
position: 386070
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:386122:-1
position: 386122
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:385355-385481:-1:exon

position:385355:-1
position: 385355
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:385481:-1
position: 385481
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:384473-384648:-1:exon

position:384473:-1
position: 384473
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:384648:-1
position: 384648
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:383587-383872:-1:exon

position:383587:-1
position: 383587
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:383872:-1
position: 383872
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:382956-383231:-1:exon

position:382956:-1
position: 382956
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:383231:-1
position: 383231
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:382438-382641:-1:exon

position:382438:-1
position: 382438
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:382641:-1
position: 382641
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:377759-381748:-1:exon

position:381748:-1
position: 381748
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

RPRD2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8839
gene: RPRD2
exception: unclassified translation discrepancy
note: The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: inserted 1 base in 1 codon; deleted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: LOW QUALITY PROTEIN: regulation of nuclear pre-mRNA domain-containing protein 2
translation: MAAGGGGRASSSSSSSSSAASSSSSSSSSSASSSAGALEASLDRKLQAVTNTMESIQGLSSWCLENKRHHSTIVYHWMKWLRRSAFPHRLNLFYLANDVIQNCKRKNAIVFRDTFAEVLPEAASLVKDPSVSKSIERIFKIWEDRNVYPEETILALKEALSTTFKTQKQLKETLNKQPNKPWKKSQTSTNPKAALKSKIVAEFRPQSLIDELLLYKRSEDQIELKEKQLSTMRVDVCSTETLKCLKDKTGGKKFSKEFEEASSKLEEFVNGLDKQVKNGPSLTEALENAGIFYEAQYKEVKVVANAYKTFANRVSNLKKKLDQLKATLPDPEESPVPSPSMDAPSPTGSESPFQGMGEEDSSRSPAVGNRKTASPEPVTDNRDVEDMELSDVEDDTSKIIVEERKEKQAAPPSAPVKAENAPKVAPATAAVSTTSVTVTTPAQTPPTPPAPKVVSAAPVPPSPALALPNLANVDLAKISSILSSLTSVMKNTGVSPASRPSPGTPTSPTALTSGLKTPVLGTPSAPSNPLANILSKVEITPESILSALSKTQTQTAPALQGLSSLLQSVAGNTIQSSEAASQSTSASPANTTVPCVKGRNIPSNTQSFISKTFGYSPNSSTAEVSSTSVTKAPIGHTAGLSSSSFKPPTNSLGFSSSHPPSPSSLLPTDTSMSQSSEISKAKLESEPPSPSLEMKIHNFLKGNPGFSGLNLNIPILSSLGSNIATTESHSADFQRGPTSTSMDNVDGTPVRDERSGTPTQDEMMDKPTSSNVDTISLLSKIMSPGSSTPSSTRSPLQSRDDGYPQELSNSVHTYRPFGLGRDSPAGMYKQPADSMEIPSSLMDSSQEKFYPDTSFQEDEDYRDFDYSGPPPSAMLNLEKKPAKSILKSSKLSEAAEYQPVLSSYGQRSQDFSVKSSFPQSMRSILDQSESCDPLSTSPGMYGSYGLRGNDSTSDGSPSPSKNDVFFAPDSNHNNLPKPVVHSGLSQKQYPDSPHSIPHRSLFSSQSPAGRAAATGVDKSLGSSISATSTMEFKNMLKNASRKPSEEKHFSQISKSGSNEGVGLSSHGQAGGAKGEQQQQEEHYRIETRVSSSCLDLPDSTEEKGAPIETLGYHNASSSRGMSGEPIQTVESIRVLGKGSRGHGREASRSGWFEMGNAASAFDNGPSSASELPGMGGFQAQYKEHVAPFQESVNNFRTNNFSPAFDHHMPPPIPPPPLEHGTPFQRDPVGPPPGPPTAPPKDHGSLFPRDHSVPPHLPPVDHTNPFSKETSSPLSLPHGVPPPPSVEHTGVPFPAPPPPPVPGEHAGVPFPTQQPPPTGEHGGVPFPAPPIPVEHGGGGAFAKEHGTVHQGTLKEHFNVHPGPREATAQPQRDHGGGAGGGGGGGAPLGRVREAVGLGGSLSREQQLGPARSVTPIGAAHRDTANRGGMMVRNPRADFRPREPFLNRDPFHXPEEAPAAFREGIPLLCTKTPLLPPQVLKQTPIS
SIO_010081: RPRD2
subclass of: SO_0000673
so part of: RPRD2
location: complement(join(378975..381748,382438..382641,382956..383231,383587..383872,384473..384648,385355..385481,386070..386122,387408..387485,388758..388858,390026..390155,392148..392397))
location: region:378975-392397:-1
so has part: feature:392148-392397:-1:exon
so has part: feature:390026-390155:-1:exon
so has part: feature:388758-388858:-1:exon
so has part: feature:387408-387485:-1:exon
so has part: feature:386070-386122:-1:exon
so has part: feature:385355-385481:-1:exon
so has part: feature:384473-384648:-1:exon
so has part: feature:383587-383872:-1:exon
so has part: feature:382956-383231:-1:exon
so has part: feature:382438-382641:-1:exon
so has part: feature:378975-381748:-1:exon

XP_027300401.2
type: Protein
SIO_000068: ncbiprotein

position:378975:-1
position: 378975
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:392397:-1
position: 392397
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:392148-392397:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:390026-390155:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:388758-388858:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:387408-387485:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:386070-386122:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:385355-385481:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:384473-384648:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:383587-383872:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:382956-383231:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:382438-382641:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:378975-381748:-1:exon

PRPF3
type: Gene
subclass of: SO_0000704
RO_0002162: 8839
gene: PRPF3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(393667..405718)
location: region:393667-405718:-1
so has part: feature:393667-405718:-1:exon
subclass of: SO_0000010

101803593
type: Gene
SIO_000068: ncbigene

position:393667:-1
position: 393667
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:405718:-1
position: 405718
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:393667-405718:-1:exon

PRPF3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8839
gene: PRPF3
product: pre-mRNA processing factor 3, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 10 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 126 samples with support for all annotated introns
transcript id: XM_005031308.5
SIO_010081: PRPF3
subclass of: SO_0000673
so part of: PRPF3
location: complement(join(393667..394323,394651..394712,395072..395155,395673..395791,396204..396317,396834..396933,397073..397216,397825..397907,398066..398232,398937..399243,399615..399835,399917..400000,400493..400639,403379..403509,403770..403914))
location: region:393667-403914:-1
so has part: feature:403770-403914:-1:exon
so has part: feature:403379-403509:-1:exon
so has part: feature:400493-400639:-1:exon
so has part: feature:399917-400000:-1:exon
so has part: feature:399615-399835:-1:exon
so has part: feature:398937-399243:-1:exon
so has part: feature:398066-398232:-1:exon
so has part: feature:397825-397907:-1:exon
so has part: feature:397073-397216:-1:exon
so has part: feature:396834-396933:-1:exon
so has part: feature:396204-396317:-1:exon
so has part: feature:395673-395791:-1:exon
so has part: feature:395072-395155:-1:exon
so has part: feature:394651-394712:-1:exon
so has part: feature:393667-394323:-1:exon

position:403914:-1
position: 403914
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:403770-403914:-1:exon

position:403770:-1
position: 403770
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:403379-403509:-1:exon

position:403379:-1
position: 403379
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:403509:-1
position: 403509
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:400493-400639:-1:exon

position:400493:-1
position: 400493
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:400639:-1
position: 400639
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:399917-400000:-1:exon

position:399917:-1
position: 399917
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:400000:-1
position: 400000
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:399615-399835:-1:exon

position:399615:-1
position: 399615
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:399835:-1
position: 399835
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:398937-399243:-1:exon

position:398937:-1
position: 398937
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:399243:-1
position: 399243
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:398066-398232:-1:exon

position:398066:-1
position: 398066
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:398232:-1
position: 398232
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:397825-397907:-1:exon

position:397825:-1
position: 397825
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:397907:-1
position: 397907
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:397073-397216:-1:exon

position:397073:-1
position: 397073
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:397216:-1
position: 397216
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:396834-396933:-1:exon

position:396834:-1
position: 396834
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:396933:-1
position: 396933
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:396204-396317:-1:exon

position:396204:-1
position: 396204
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:396317:-1
position: 396317
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:395673-395791:-1:exon

position:395673:-1
position: 395673
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:395791:-1
position: 395791
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:395072-395155:-1:exon

position:395072:-1
position: 395072
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:395155:-1
position: 395155
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:394651-394712:-1:exon

position:394651:-1
position: 394651
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:394712:-1
position: 394712
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:393667-394323:-1:exon

position:394323:-1
position: 394323
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

PRPF3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8839
gene: PRPF3
product: pre-mRNA processing factor 3, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 10 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 126 samples with support for all annotated introns
transcript id: XM_038167847.1
SIO_010081: PRPF3
subclass of: SO_0000673
so part of: PRPF3
location: complement(join(394177..394323,394651..394712,395072..395155,395673..395791,396204..396317,396834..396933,397073..397216,397825..397907,398066..398232,398937..399243,399615..399835,399917..400000,400493..400639,403379..403509,403770..403947,405568..405718))
location: region:394177-405718:-1
so has part: feature:405568-405718:-1:exon
so has part: feature:403770-403947:-1:exon
so has part: feature:403379-403509:-1:exon
so has part: feature:400493-400639:-1:exon
so has part: feature:399917-400000:-1:exon
so has part: feature:399615-399835:-1:exon
so has part: feature:398937-399243:-1:exon
so has part: feature:398066-398232:-1:exon
so has part: feature:397825-397907:-1:exon
so has part: feature:397073-397216:-1:exon
so has part: feature:396834-396933:-1:exon
so has part: feature:396204-396317:-1:exon
so has part: feature:395673-395791:-1:exon
so has part: feature:395072-395155:-1:exon
so has part: feature:394651-394712:-1:exon
so has part: feature:394177-394323:-1:exon

position:394177:-1
position: 394177
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:405568-405718:-1:exon

position:405568:-1
position: 405568
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:403770-403947:-1:exon

position:403947:-1
position: 403947
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:403379-403509:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:400493-400639:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:399917-400000:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:399615-399835:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:398937-399243:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:398066-398232:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:397825-397907:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:397073-397216:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:396834-396933:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:396204-396317:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:395673-395791:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:395072-395155:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:394651-394712:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:394177-394323:-1:exon

PRPF3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8839
gene: PRPF3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: U4/U6 small nuclear ribonucleoprotein Prp3 isoform X1
translation: MALSKRELDELKPWIEKTVKRVLGFSEPTVVTAALNCVGKGMDKKKAADHLKPFLDDSTLRFVDKLFEAVEEGRSSRHSKSNSDRNRKRELKDVFGDDSEVSKESSGVKKRRIPRFEEVEDEPEVIPGPPSESPGMLTKLQIKQMMEAATRQIEERKKQLSFISPPTPQPKISSSSQSERLPIGNTIQPSQAATFMNDAIEKARKAAELQARIQAQLALKPGLIGNANMVGLANLHAMGIAPPKVELKDQTKPTPLILDEQGRTVDATGKEIELTHRMPTLKANIRAVKREQFKQQLKEKPSEDMESNTYFDPRVSITPAQRQKRTFKFHEKGKFEKIAQRLRTKAQLEKLQAEISQAARKTGIHTSTKLALITPKKELKEGEIPEIEWWDSYIIPNGLDLKGGTSSKRDEYFGITNLVEHPAQLNPPVDSDTPVTLGVYLTKKEQKKLRRQTRREAQKELQEKVRLGLMPPPEPKVRISNLMRVLGTEAVQDPTKVEAHVRAQMAKRQKAHEEANAARKLTAEQRKAKKIKKLKEDVSQGVHIAVYRVRNLSNPAKKFKIEANAGQLYLTGVVVLHKDVNVVVVEGGPKAQKKFKRLMLHRIKWDEQTSNTKGEDDDESDEESVKKTNKCSLVWEGTAKDRSFGEMKFKQCPTENMAREHFKKHGAEHYWDLALSESVLESTD
SIO_010081: PRPF3
subclass of: SO_0000673
so part of: PRPF3
location: complement(join(394177..394323,394651..394712,395072..395155,395673..395791,396204..396317,396834..396933,397073..397216,397825..397907,398066..398232,398937..399243,399615..399835,399917..400000,400493..400639,403379..403509,403770..403914))
location: region:394177-403914:-1
so has part: feature:403770-403914:-1:exon
so has part: feature:403379-403509:-1:exon
so has part: feature:400493-400639:-1:exon
so has part: feature:399917-400000:-1:exon
so has part: feature:399615-399835:-1:exon
so has part: feature:398937-399243:-1:exon
so has part: feature:398066-398232:-1:exon
so has part: feature:397825-397907:-1:exon
so has part: feature:397073-397216:-1:exon
so has part: feature:396834-396933:-1:exon
so has part: feature:396204-396317:-1:exon
so has part: feature:395673-395791:-1:exon
so has part: feature:395072-395155:-1:exon
so has part: feature:394651-394712:-1:exon
so has part: feature:394177-394323:-1:exon

XP_005031365.2
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:403770-403914:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:403379-403509:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:400493-400639:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:399917-400000:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:399615-399835:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:398937-399243:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:398066-398232:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:397825-397907:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:397073-397216:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:396834-396933:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:396204-396317:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:395673-395791:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:395072-395155:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:394651-394712:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:394177-394323:-1:exon

PRPF3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8839
gene: PRPF3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: U4/U6 small nuclear ribonucleoprotein Prp3 isoform X1
translation: MALSKRELDELKPWIEKTVKRVLGFSEPTVVTAALNCVGKGMDKKKAADHLKPFLDDSTLRFVDKLFEAVEEGRSSRHSKSNSDRNRKRELKDVFGDDSEVSKESSGVKKRRIPRFEEVEDEPEVIPGPPSESPGMLTKLQIKQMMEAATRQIEERKKQLSFISPPTPQPKISSSSQSERLPIGNTIQPSQAATFMNDAIEKARKAAELQARIQAQLALKPGLIGNANMVGLANLHAMGIAPPKVELKDQTKPTPLILDEQGRTVDATGKEIELTHRMPTLKANIRAVKREQFKQQLKEKPSEDMESNTYFDPRVSITPAQRQKRTFKFHEKGKFEKIAQRLRTKAQLEKLQAEISQAARKTGIHTSTKLALITPKKELKEGEIPEIEWWDSYIIPNGLDLKGGTSSKRDEYFGITNLVEHPAQLNPPVDSDTPVTLGVYLTKKEQKKLRRQTRREAQKELQEKVRLGLMPPPEPKVRISNLMRVLGTEAVQDPTKVEAHVRAQMAKRQKAHEEANAARKLTAEQRKAKKIKKLKEDVSQGVHIAVYRVRNLSNPAKKFKIEANAGQLYLTGVVVLHKDVNVVVVEGGPKAQKKFKRLMLHRIKWDEQTSNTKGEDDDESDEESVKKTNKCSLVWEGTAKDRSFGEMKFKQCPTENMAREHFKKHGAEHYWDLALSESVLESTD
SIO_010081: PRPF3
subclass of: SO_0000673
so part of: PRPF3
location: complement(join(394177..394323,394651..394712,395072..395155,395673..395791,396204..396317,396834..396933,397073..397216,397825..397907,398066..398232,398937..399243,399615..399835,399917..400000,400493..400639,403379..403509,403770..403914))
location: region:394177-403914:-1
so has part: feature:403770-403914:-1:exon
so has part: feature:403379-403509:-1:exon
so has part: feature:400493-400639:-1:exon
so has part: feature:399917-400000:-1:exon
so has part: feature:399615-399835:-1:exon
so has part: feature:398937-399243:-1:exon
so has part: feature:398066-398232:-1:exon
so has part: feature:397825-397907:-1:exon
so has part: feature:397073-397216:-1:exon
so has part: feature:396834-396933:-1:exon
so has part: feature:396204-396317:-1:exon
so has part: feature:395673-395791:-1:exon
so has part: feature:395072-395155:-1:exon
so has part: feature:394651-394712:-1:exon
so has part: feature:394177-394323:-1:exon

XP_038023775.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:403770-403914:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:403379-403509:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:400493-400639:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:399917-400000:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:399615-399835:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:398937-399243:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:398066-398232:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:397825-397907:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:397073-397216:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:396834-396933:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:396204-396317:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:395673-395791:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:395072-395155:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:394651-394712:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:394177-394323:-1:exon

PRPF3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8839
gene: PRPF3
product: pre-mRNA processing factor 3, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 91 samples with support for all annotated introns
transcript id: XM_038167848.1
SIO_010081: PRPF3
subclass of: SO_0000673
so part of: PRPF3
location: complement(join(394177..394323,394651..394712,395072..395155,395673..395791,396204..396317,396834..396933,397073..397216,397825..397907,398066..398232,398937..399243,399615..399835,399917..400000,400493..400639,401465..401560,403379..403510))
location: region:394177-403510:-1
so has part: feature:403379-403510:-1:exon
so has part: feature:401465-401560:-1:exon
so has part: feature:400493-400639:-1:exon
so has part: feature:399917-400000:-1:exon
so has part: feature:399615-399835:-1:exon
so has part: feature:398937-399243:-1:exon
so has part: feature:398066-398232:-1:exon
so has part: feature:397825-397907:-1:exon
so has part: feature:397073-397216:-1:exon
so has part: feature:396834-396933:-1:exon
so has part: feature:396204-396317:-1:exon
so has part: feature:395673-395791:-1:exon
so has part: feature:395072-395155:-1:exon
so has part: feature:394651-394712:-1:exon
so has part: feature:394177-394323:-1:exon

position:403510:-1
position: 403510
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:403379-403510:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:401465-401560:-1:exon

position:401465:-1
position: 401465
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:401560:-1
position: 401560
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:400493-400639:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:399917-400000:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:399615-399835:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:398937-399243:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:398066-398232:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:397825-397907:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:397073-397216:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:396834-396933:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:396204-396317:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:395673-395791:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:395072-395155:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:394651-394712:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:394177-394323:-1:exon

PRPF3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8839
gene: PRPF3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: U4/U6 small nuclear ribonucleoprotein Prp3 isoform X2
translation: MLTKLQIKQMMEAATRQIEERKKQLSFISPPTPQPKISSSSQSERLPIGNTIQPSQAATFMNDAIEKARKAAELQARIQAQLALKPGLIGNANMVGLANLHAMGIAPPKVELKDQTKPTPLILDEQGRTVDATGKEIELTHRMPTLKANIRAVKREQFKQQLKEKPSEDMESNTYFDPRVSITPAQRQKRTFKFHEKGKFEKIAQRLRTKAQLEKLQAEISQAARKTGIHTSTKLALITPKKELKEGEIPEIEWWDSYIIPNGLDLKGGTSSKRDEYFGITNLVEHPAQLNPPVDSDTPVTLGVYLTKKEQKKLRRQTRREAQKELQEKVRLGLMPPPEPKVRISNLMRVLGTEAVQDPTKVEAHVRAQMAKRQKAHEEANAARKLTAEQRKAKKIKKLKEDVSQGVHIAVYRVRNLSNPAKKFKIEANAGQLYLTGVVVLHKDVNVVVVEGGPKAQKKFKRLMLHRIKWDEQTSNTKGEDDDESDEESVKKTNKCSLVWEGTAKDRSFGEMKFKQCPTENMAREHFKKHGAEHYWDLALSESVLESTD
SIO_010081: PRPF3
subclass of: SO_0000673
so part of: PRPF3
location: complement(join(394177..394323,394651..394712,395072..395155,395673..395791,396204..396317,396834..396933,397073..397216,397825..397907,398066..398232,398937..399243,399615..399835,399917..400000,400493..400510))
location: region:394177-400510:-1
so has part: feature:400493-400510:-1:exon
so has part: feature:399917-400000:-1:exon
so has part: feature:399615-399835:-1:exon
so has part: feature:398937-399243:-1:exon
so has part: feature:398066-398232:-1:exon
so has part: feature:397825-397907:-1:exon
so has part: feature:397073-397216:-1:exon
so has part: feature:396834-396933:-1:exon
so has part: feature:396204-396317:-1:exon
so has part: feature:395673-395791:-1:exon
so has part: feature:395072-395155:-1:exon
so has part: feature:394651-394712:-1:exon
so has part: feature:394177-394323:-1:exon

XP_038023776.1
type: Protein
SIO_000068: ncbiprotein

position:400510:-1
position: 400510
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:400493-400510:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:399917-400000:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:399615-399835:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:398937-399243:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:398066-398232:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:397825-397907:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:397073-397216:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:396834-396933:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:396204-396317:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:395673-395791:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:395072-395155:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:394651-394712:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:394177-394323:-1:exon

MRPS21
type: Gene
subclass of: SO_0000704
RO_0002162: 8839
gene: MRPS21
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(406375..407011)
location: region:406375-407011:-1
so has part: feature:406375-407011:-1:exon
subclass of: SO_0000010

113839893
type: Gene
SIO_000068: ncbigene

position:406375:-1
position: 406375
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:407011:-1
position: 407011
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:406375-407011:-1:exon

MRPS21
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8839
gene: MRPS21
product: mitochondrial ribosomal protein S21
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 126 samples with support for all annotated introns
transcript id: XM_038167881.1
SIO_010081: MRPS21
subclass of: SO_0000673
so part of: MRPS21
location: complement(join(406375..406658,406772..407011))
location: region:406375-407011:-1
so has part: feature:406772-407011:-1:exon
so has part: feature:406375-406658:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:406772-407011:-1:exon

position:406772:-1
position: 406772
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:406375-406658:-1:exon

position:406658:-1
position: 406658
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

MRPS21
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8839
gene: MRPS21
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: 28S ribosomal protein S21, mitochondrial
translation: MANHLRFVGRTVMVRNGNVDAAYGALSRILAHDGVLETVKQRRYYEKPCRKRQRLAYEACRRVYNAEMARKIAFVSRKNRPDPWQGC
SIO_010081: MRPS21
subclass of: SO_0000673
so part of: MRPS21
location: complement(join(406478..406658,406772..406854))
location: region:406478-406854:-1
so has part: feature:406772-406854:-1:exon
so has part: feature:406478-406658:-1:exon

XP_038023809.1
type: Protein
SIO_000068: ncbiprotein

position:406478:-1
position: 406478
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:406854:-1
position: 406854
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:406772-406854:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:406478-406658:-1:exon

CA14
type: Gene
subclass of: SO_0000704
RO_0002162: 8839
gene: CA14
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 411718..415158
location: region:411718-415158:1
so has part: feature:411718-415158:1:exon
subclass of: SO_0000010

113839858
type: Gene
SIO_000068: ncbigene

position:411718:1
position: 411718
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:415158:1
position: 415158
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:411718-415158:1:exon

CA14
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8839
gene: CA14
product: carbonic anhydrase 14
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 6 samples with support for all annotated introns
transcript id: XM_038167876.1
SIO_010081: CA14
subclass of: SO_0000673
so part of: CA14
location: join(411718..411849,412063..412083,412749..412928,413024..413157,413808..413903,413998..414064,414149..414306,414410..414536,414645..414665,414772..414857,414970..415158)
location: region:411718-415158:1
so has part: feature:411718-411849:1:exon
so has part: feature:412063-412083:1:exon
so has part: feature:412749-412928:1:exon
so has part: feature:413024-413157:1:exon
so has part: feature:413808-413903:1:exon
so has part: feature:413998-414064:1:exon
so has part: feature:414149-414306:1:exon
so has part: feature:414410-414536:1:exon
so has part: feature:414645-414665:1:exon
so has part: feature:414772-414857:1:exon
so has part: feature:414970-415158:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:411718-411849:1:exon

position:411849:1
position: 411849
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:412063-412083:1:exon

position:412063:1
position: 412063
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:412083:1
position: 412083
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:412749-412928:1:exon

position:412749:1
position: 412749
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:412928:1
position: 412928
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:413024-413157:1:exon

position:413024:1
position: 413024
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:413157:1
position: 413157
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:413808-413903:1:exon

position:413808:1
position: 413808
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:413903:1
position: 413903
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:413998-414064:1:exon

position:413998:1
position: 413998
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:414064:1
position: 414064
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:414149-414306:1:exon

position:414149:1
position: 414149
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:414306:1
position: 414306
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:414410-414536:1:exon

position:414410:1
position: 414410
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:414536:1
position: 414536
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:414645-414665:1:exon

position:414645:1
position: 414645
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:414665:1
position: 414665
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:414772-414857:1:exon

position:414772:1
position: 414772
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:414857:1
position: 414857
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:414970-415158:1:exon

position:414970:1
position: 414970
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

CA14
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8839
gene: CA14
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: carbonic anhydrase 14
translation: MLLTLLLLLGGPAPALPAGPHWTYEGPHGQQHWPEGHPACGGRSQSPIDIGTGRALPDPSLPPLRPIGYNRPPAAPFGLANNGHTAVLALPPSLRLGGLPHSFAAAQLHFHWGRNGGAEHLLDGYRAPAELHVVHYDAERFANASQAQHHAAGLAVLGVLLEAGDEPNPAYDNILRHLGSIRYAGQATSIPSFSLRGLLPQRLDRYYRYNGSLTTPPCFQSVLWSVFQQPVLLSRAQLEQLRGSLYATAPDEPEPERLEENFRAPQDLNQRLVLASFSSGPEGYSTGEVVAIVFGTVFGCLGLFLACPFREQEAAREEQAAAGRGLQSLLAPHA
SIO_010081: CA14
subclass of: SO_0000673
so part of: CA14
location: join(411795..411849,412063..412083,412749..412928,413024..413157,413808..413903,413998..414064,414149..414306,414410..414536,414645..414665,414772..414857,414970..415029)
location: region:411795-415029:1
so has part: feature:411795-411849:1:exon
so has part: feature:412063-412083:1:exon
so has part: feature:412749-412928:1:exon
so has part: feature:413024-413157:1:exon
so has part: feature:413808-413903:1:exon
so has part: feature:413998-414064:1:exon
so has part: feature:414149-414306:1:exon
so has part: feature:414410-414536:1:exon
so has part: feature:414645-414665:1:exon
so has part: feature:414772-414857:1:exon
so has part: feature:414970-415029:1:exon

XP_038023804.1
type: Protein
SIO_000068: ncbiprotein

position:411795:1
position: 411795
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:415029:1
position: 415029
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:411795-411849:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:412063-412083:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:412749-412928:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:413024-413157:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:413808-413903:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:413998-414064:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:414149-414306:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:414410-414536:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:414645-414665:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:414772-414857:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:414970-415029:1:exon

APH1A
type: Gene
subclass of: SO_0000704
RO_0002162: 8839
gene: APH1A
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(415171..419084)
location: region:415171-419084:-1
so has part: feature:415171-419084:-1:exon
subclass of: SO_0000010

113839891
type: Gene
SIO_000068: ncbigene

position:415171:-1
position: 415171
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:419084:-1
position: 419084
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:415171-419084:-1:exon

APH1A
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8839
gene: APH1A
product: aph-1 homolog A, gamma-secretase subunit
exception: unclassified transcription discrepancy
note: The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: deleted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 95% coverage of the annotated genomic feature by RNAseq alignments, including 126 samples with support for all annotated introns
transcript id: XM_027444610.2
SIO_010081: APH1A
subclass of: SO_0000673
so part of: APH1A
location: complement(join(415171..415878,416168..416291,416620..416747,416909..417031,417397..417470,417764..417935,418972..419084))
location: region:415171-419084:-1
so has part: feature:418972-419084:-1:exon
so has part: feature:417764-417935:-1:exon
so has part: feature:417397-417470:-1:exon
so has part: feature:416909-417031:-1:exon
so has part: feature:416620-416747:-1:exon
so has part: feature:416168-416291:-1:exon
so has part: feature:415171-415878:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:418972-419084:-1:exon

position:418972:-1
position: 418972
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:417764-417935:-1:exon

position:417764:-1
position: 417764
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:417935:-1
position: 417935
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:417397-417470:-1:exon

position:417397:-1
position: 417397
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:417470:-1
position: 417470
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:416909-417031:-1:exon

position:416909:-1
position: 416909
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:417031:-1
position: 417031
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:416620-416747:-1:exon

position:416620:-1
position: 416620
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:416747:-1
position: 416747
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:416168-416291:-1:exon

position:416168:-1
position: 416168
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:416291:-1
position: 416291
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:415171-415878:-1:exon

position:415878:-1
position: 415878
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

APH1A
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8839
gene: APH1A
exception: unclassified translation discrepancy
note: The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: deleted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: LOW QUALITY PROTEIN: gamma-secretase subunit APH-1A
translation: MGAAVFFGCAGIAFGPALALVLLTVAAEPLRVIILVAGAFFWLVSLLLASLIWFVSSILSDREDAKLQYGLLIFGAAVSVLLQEVFRFAYFKLLKKADEGLATISEDGRSPISLKQMAYVSGLSFGIISGVFSVINILADSIGPGIVGIHGDSPYYFITSAFLTMAVVLLHTFWGVIFFDACERRRYWCLGVVVASHLATSGLTFLNPWYEASLVPIYIITVCTGLWAFVTAGGSFHNVLKCLSCKQEADSRVMMYSALRVPFEE
SIO_010081: APH1A
subclass of: SO_0000673
so part of: APH1A
location: complement(join(415814..415878,416168..416291,416620..416747,416909..417031,417397..417470,417764..417935,418972..419084))
location: region:415814-419084:-1
so has part: feature:418972-419084:-1:exon
so has part: feature:417764-417935:-1:exon
so has part: feature:417397-417470:-1:exon
so has part: feature:416909-417031:-1:exon
so has part: feature:416620-416747:-1:exon
so has part: feature:416168-416291:-1:exon
so has part: feature:415814-415878:-1:exon

XP_027300411.2
type: Protein
SIO_000068: ncbiprotein

position:415814:-1
position: 415814
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:418972-419084:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:417764-417935:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:417397-417470:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:416909-417031:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:416620-416747:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:416168-416291:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:415814-415878:-1:exon

LOC119713071
type: Gene
subclass of: SO_0000704
RO_0002162: 8839
gene: LOC119713071
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(419694..422631)
location: region:419694-422631:-1
so has part: feature:419694-422631:-1:exon
subclass of: SO_0000010

119713071
type: Gene
SIO_000068: ncbigene

position:419694:-1
position: 419694
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:422631:-1
position: 422631
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:419694-422631:-1:exon

LOC119713071
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8839
gene: LOC119713071
product: uncharacterized LOC119713071, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 7 samples with support for all annotated introns
transcript id: XM_038167860.1
SIO_010081: LOC119713071
subclass of: SO_0000673
so part of: LOC119713071
location: complement(join(419694..419949,420071..420117,420256..420384,420742..421020,421285..421611,421737..422631))
location: region:419694-422631:-1
so has part: feature:421737-422631:-1:exon
so has part: feature:421285-421611:-1:exon
so has part: feature:420742-421020:-1:exon
so has part: feature:420256-420384:-1:exon
so has part: feature:420071-420117:-1:exon
so has part: feature:419694-419949:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:421737-422631:-1:exon

position:421737:-1
position: 421737
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:421285-421611:-1:exon

position:421285:-1
position: 421285
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:421611:-1
position: 421611
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:420742-421020:-1:exon

position:420742:-1
position: 420742
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:421020:-1
position: 421020
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:420256-420384:-1:exon

position:420256:-1
position: 420256
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:420384:-1
position: 420384
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:420071-420117:-1:exon

position:420071:-1
position: 420071
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:420117:-1
position: 420117
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:419694-419949:-1:exon

position:419949:-1
position: 419949
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC119713071
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8839
gene: LOC119713071
product: uncharacterized LOC119713071, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 6 samples with support for all annotated introns
transcript id: XM_038167862.1
SIO_010081: LOC119713071
subclass of: SO_0000673
so part of: LOC119713071
location: complement(join(419694..419949,420071..420117,420256..420318,420742..421020,421285..421620,421737..422631))
location: region:419694-422631:-1
so has part: feature:421737-422631:-1:exon
so has part: feature:421285-421620:-1:exon
so has part: feature:420742-421020:-1:exon
so has part: feature:420256-420318:-1:exon
so has part: feature:420071-420117:-1:exon
so has part: feature:419694-419949:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:421737-422631:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:421285-421620:-1:exon

position:421620:-1
position: 421620
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:420742-421020:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:420256-420318:-1:exon

position:420318:-1
position: 420318
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:420071-420117:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:419694-419949:-1:exon

LOC119713071
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8839
gene: LOC119713071
product: uncharacterized LOC119713071, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 8 samples with support for all annotated introns
transcript id: XM_038167861.1
SIO_010081: LOC119713071
subclass of: SO_0000673
so part of: LOC119713071
location: complement(join(419694..419949,420071..420117,420256..420357,420742..421020,421285..421620,421737..422631))
location: region:419694-422631:-1
so has part: feature:421737-422631:-1:exon
so has part: feature:421285-421620:-1:exon
so has part: feature:420742-421020:-1:exon
so has part: feature:420256-420357:-1:exon
so has part: feature:420071-420117:-1:exon
so has part: feature:419694-419949:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:421737-422631:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:421285-421620:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:420742-421020:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:420256-420357:-1:exon

position:420357:-1
position: 420357
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:420071-420117:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:419694-419949:-1:exon

LOC119713071
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8839
gene: LOC119713071
product: uncharacterized LOC119713071, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 6 samples with support for all annotated introns
transcript id: XM_038167859.1
SIO_010081: LOC119713071
subclass of: SO_0000673
so part of: LOC119713071
location: complement(join(419694..419949,420071..420117,420256..420384,420742..421020,421285..421620,421737..422631))
location: region:419694-422631:-1
so has part: feature:421737-422631:-1:exon
so has part: feature:421285-421620:-1:exon
so has part: feature:420742-421020:-1:exon
so has part: feature:420256-420384:-1:exon
so has part: feature:420071-420117:-1:exon
so has part: feature:419694-419949:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:421737-422631:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:421285-421620:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:420742-421020:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:420256-420384:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:420071-420117:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:419694-419949:-1:exon

LOC119713071
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8839
gene: LOC119713071
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: uncharacterized protein LOC119713071 isoform X2
translation: MAGGAAPGGAATPAPRQLPSLCAAVSPKQERRHGALWFGVPSAGAGFFFHVENLGVGTRGRRGAFEEPPAALSIAEMVKSQIFLPDVGPCSKLTRALHPSMHPTAAGSGAWGGRIPCGDTASSVGTPCPHGRGTSLPGPQTLGSCKSRCTRPLCRRTGTSTPMAPLGFSCTKALLATGLLLLWLAPATLLDLHQPQPFLFVEPSTPVDISCILGEGLDGKGNVFWYRRVRGERPQLILNCSQEAQEGFSCEYSKGRAVLHIAVAHISHTGLYLCAYYINSRLKFRNGTALIVGDSWRAQSWVRVLAPQDSPSDPPGLVCAVGNASGPVLVSWPGGPRPQQVLGLGGSTELLISPAGIAGGTGGLCEVRFNASGPPVRRSVELHGAKDGWDKWPPPGACTTPSVVAMAAAGALLLLGLSLGVRCLLRARTGLRPRAPNPQAPQHQQGELTYAQLRFATPARAAP
SIO_010081: LOC119713071
subclass of: SO_0000673
so part of: LOC119713071
location: complement(join(419893..419949,420071..420117,420256..420384,420742..421020,421285..421611,421737..422289))
location: region:419893-422289:-1
so has part: feature:421737-422289:-1:exon
so has part: feature:421285-421611:-1:exon
so has part: feature:420742-421020:-1:exon
so has part: feature:420256-420384:-1:exon
so has part: feature:420071-420117:-1:exon
so has part: feature:419893-419949:-1:exon

XP_038023788.1
type: Protein
SIO_000068: ncbiprotein

position:419893:-1
position: 419893
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:422289:-1
position: 422289
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:421737-422289:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:421285-421611:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:420742-421020:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:420256-420384:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:420071-420117:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:419893-419949:-1:exon

LOC119713071
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8839
gene: LOC119713071
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: uncharacterized protein LOC119713071 isoform X4
translation: MAGGAAPGGAATPAPRQLPSLCAAVSPKQERRHGALWFGVPSAGAGFFFHVENLGVGTRGRRGAFEEPPAALSIAEMVKSQIFLPDVGPCSKLTRALHPSMHPTAAGSGAWGGRIPCGDTASSVGTPCPHGRGTSLPGPQTLGSCKSRCTRPLCRRTGTSTPMAPLGFSCTKALLATGLLLLWLVPTAPATLLDLHQPQPFLFVEPSTPVDISCILGEGLDGKGNVFWYRRVRGERPQLILNCSQEAQEGFSCEYSKGRAVLHIAVAHISHTGLYLCAYYINSRLKFRNGTALIVGDSWRAQSWVRVLAPQDSPSDPPGLVCAVGNASGPVLVSWPGGPRPQQVLGLGGSTELLISPAGIAGGTGGLCEVRFNASGPPVRRSVELHGAKAGALLLLGLSLGVRCLLRARTGLRPRAPNPQAPQHQQGELTYAQLRFATPARAAP
SIO_010081: LOC119713071
subclass of: SO_0000673
so part of: LOC119713071
location: complement(join(419893..419949,420071..420117,420256..420318,420742..421020,421285..421620,421737..422289))
location: region:419893-422289:-1
so has part: feature:421737-422289:-1:exon
so has part: feature:421285-421620:-1:exon
so has part: feature:420742-421020:-1:exon
so has part: feature:420256-420318:-1:exon
so has part: feature:420071-420117:-1:exon
so has part: feature:419893-419949:-1:exon

XP_038023790.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:421737-422289:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:421285-421620:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:420742-421020:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:420256-420318:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:420071-420117:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:419893-419949:-1:exon

LOC119713071
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8839
gene: LOC119713071
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: uncharacterized protein LOC119713071 isoform X3
translation: MAGGAAPGGAATPAPRQLPSLCAAVSPKQERRHGALWFGVPSAGAGFFFHVENLGVGTRGRRGAFEEPPAALSIAEMVKSQIFLPDVGPCSKLTRALHPSMHPTAAGSGAWGGRIPCGDTASSVGTPCPHGRGTSLPGPQTLGSCKSRCTRPLCRRTGTSTPMAPLGFSCTKALLATGLLLLWLVPTAPATLLDLHQPQPFLFVEPSTPVDISCILGEGLDGKGNVFWYRRVRGERPQLILNCSQEAQEGFSCEYSKGRAVLHIAVAHISHTGLYLCAYYINSRLKFRNGTALIVGDSWRAQSWVRVLAPQDSPSDPPGLVCAVGNASGPVLVSWPGGPRPQQVLGLGGSTELLISPAGIAGGTGGLCEVRFNASGPPVRRSVELHGAKGACTTPSVVAMAAAGALLLLGLSLGVRCLLRARTGLRPRAPNPQAPQHQQGELTYAQLRFATPARAAP
SIO_010081: LOC119713071
subclass of: SO_0000673
so part of: LOC119713071
location: complement(join(419893..419949,420071..420117,420256..420357,420742..421020,421285..421620,421737..422289))
location: region:419893-422289:-1
so has part: feature:421737-422289:-1:exon
so has part: feature:421285-421620:-1:exon
so has part: feature:420742-421020:-1:exon
so has part: feature:420256-420357:-1:exon
so has part: feature:420071-420117:-1:exon
so has part: feature:419893-419949:-1:exon

XP_038023789.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:421737-422289:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:421285-421620:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:420742-421020:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:420256-420357:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:420071-420117:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:419893-419949:-1:exon

LOC119713071
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8839
gene: LOC119713071
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: uncharacterized protein LOC119713071 isoform X1
translation: MAGGAAPGGAATPAPRQLPSLCAAVSPKQERRHGALWFGVPSAGAGFFFHVENLGVGTRGRRGAFEEPPAALSIAEMVKSQIFLPDVGPCSKLTRALHPSMHPTAAGSGAWGGRIPCGDTASSVGTPCPHGRGTSLPGPQTLGSCKSRCTRPLCRRTGTSTPMAPLGFSCTKALLATGLLLLWLVPTAPATLLDLHQPQPFLFVEPSTPVDISCILGEGLDGKGNVFWYRRVRGERPQLILNCSQEAQEGFSCEYSKGRAVLHIAVAHISHTGLYLCAYYINSRLKFRNGTALIVGDSWRAQSWVRVLAPQDSPSDPPGLVCAVGNASGPVLVSWPGGPRPQQVLGLGGSTELLISPAGIAGGTGGLCEVRFNASGPPVRRSVELHGAKDGWDKWPPPGACTTPSVVAMAAAGALLLLGLSLGVRCLLRARTGLRPRAPNPQAPQHQQGELTYAQLRFATPARAAP
SIO_010081: LOC119713071
subclass of: SO_0000673
so part of: LOC119713071
location: complement(join(419893..419949,420071..420117,420256..420384,420742..421020,421285..421620,421737..422289))
location: region:419893-422289:-1
so has part: feature:421737-422289:-1:exon
so has part: feature:421285-421620:-1:exon
so has part: feature:420742-421020:-1:exon
so has part: feature:420256-420384:-1:exon
so has part: feature:420071-420117:-1:exon
so has part: feature:419893-419949:-1:exon

XP_038023787.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:421737-422289:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:421285-421620:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:420742-421020:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:420256-420384:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:420071-420117:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:419893-419949:-1:exon

LOC113839892
type: Gene
subclass of: SO_0000704
RO_0002162: 8839
gene: LOC113839892
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 422846..437456
location: region:422846-437456:1
so has part: feature:422846-437456:1:exon
subclass of: SO_0000010

113839892
type: Gene
SIO_000068: ncbigene

position:422846:1
position: 422846
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:437456:1
position: 437456
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:422846-437456:1:exon

LOC113839892
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8839
gene: LOC113839892
product: M1-specific T cell receptor beta chain-like, transcript variant X7
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 93% coverage of the annotated genomic feature by RNAseq alignments, including 27 samples with support for all annotated introns
transcript id: XM_038167871.1
SIO_010081: LOC113839892
subclass of: SO_0000673
so part of: LOC113839892
location: join(422846..422982,423207..423536,423630..423824,424069..424190,424345..424487)
location: region:422846-424487:1
so has part: feature:422846-422982:1:exon
so has part: feature:423207-423536:1:exon
so has part: feature:423630-423824:1:exon
so has part: feature:424069-424190:1:exon
so has part: feature:424345-424487:1:exon

position:424487:1
position: 424487
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:422846-422982:1:exon

position:422982:1
position: 422982
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:423207-423536:1:exon

position:423207:1
position: 423207
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:423536:1
position: 423536
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:423630-423824:1:exon

position:423630:1
position: 423630
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:423824:1
position: 423824
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:424069-424190:1:exon

position:424069:1
position: 424069
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:424190:1
position: 424190
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:424345-424487:1:exon

position:424345:1
position: 424345
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC113839892
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8839
gene: LOC113839892
product: M1-specific T cell receptor beta chain-like, transcript variant X10
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 93% coverage of the annotated genomic feature by RNAseq alignments, including 27 samples with support for all annotated introns
transcript id: XM_038167874.1
SIO_010081: LOC113839892
subclass of: SO_0000673
so part of: LOC113839892
location: join(422846..422982,423207..423536,423630..423824,424072..424190,424345..424487)
location: region:422846-424487:1
so has part: feature:422846-422982:1:exon
so has part: feature:423207-423536:1:exon
so has part: feature:423630-423824:1:exon
so has part: feature:424072-424190:1:exon
so has part: feature:424345-424487:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:422846-422982:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:423207-423536:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:423630-423824:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:424072-424190:1:exon

position:424072:1
position: 424072
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:424345-424487:1:exon

LOC113839892
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8839
gene: LOC113839892
product: M1-specific T cell receptor beta chain-like, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 10 samples with support for all annotated introns
transcript id: XM_038167867.1
SIO_010081: LOC113839892
subclass of: SO_0000673
so part of: LOC113839892
location: join(422874..422982,429654..429983,430066..430260,430504..431039)
location: region:422874-431039:1
so has part: feature:422874-422982:1:exon
so has part: feature:429654-429983:1:exon
so has part: feature:430066-430260:1:exon
so has part: feature:430504-431039:1:exon

position:422874:1
position: 422874
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:431039:1
position: 431039
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:422874-422982:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:429654-429983:1:exon

position:429654:1
position: 429654
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:429983:1
position: 429983
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:430066-430260:1:exon

position:430066:1
position: 430066
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:430260:1
position: 430260
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:430504-431039:1:exon

position:430504:1
position: 430504
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC113839892
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8839
gene: LOC113839892
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: uncharacterized protein LOC113839892 isoform X3
translation: MCSLPGVLLLLLTGAASVEELQIQQSPAELWLSPGATAELSCNISGSPEQANWYREKPDGSLERIYWSAAASKPKGRYSGTVKELFFFSLNISDVQREDSGYYYCTSSVLHSQFGNGTRLLVTDASEPKLSILVLVDAEEPSDFVSLQCHLPGAWNLTWVSAERWDGAMNCTATERGTGRIVSETIGTAGCFLWLLAFVPPGAAVLALMWWAARLRRRPARAVLRRGPEVSCFPSPRHEAVGTAGGRSSQAARPGALARAKHPLQLQAQPQARGFSLSLAARVRVRGAGALRSPFPAPALPEAAHACGLRAAKTREERESGGILRSAAFPCWAAWQRGRRNAESAAGSSIATRNCMQIIKS
SIO_010081: LOC113839892
subclass of: SO_0000673
so part of: LOC113839892
location: join(422943..422982,429654..429983,430066..430260,430504..431024)
location: region:422943-431024:1
so has part: feature:422943-422982:1:exon
so has part: feature:429654-429983:1:exon
so has part: feature:430066-430260:1:exon
so has part: feature:430504-431024:1:exon

XP_038023795.1
type: Protein
SIO_000068: ncbiprotein

position:422943:1
position: 422943
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:431024:1
position: 431024
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:422943-422982:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:429654-429983:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:430066-430260:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:430504-431024:1:exon

LOC113839892
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8839
gene: LOC113839892
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: M1-specific T cell receptor beta chain-like isoform X7
translation: MCSLPGVLLLLLTGAASAKEPWIQESPAQLWVSPGETAKLSCSISGSPWHANWYREKPDGSLEWIYESTAASKPNGKYSGMMRARGIFPLNISDVQREDSGYYYCTSSVSHSQFGKGTRLLVTDASEPKLSILVPVDAEEPSDFVPLLCHLPGSWNLTWVSAEHWNGAMNCTATERGTGRIVSETIGTAGCFLWLLAFVPPGAAVLALMWWAARLRRRPARAVLRRGPEPECEYAALGH
SIO_010081: LOC113839892
subclass of: SO_0000673
so part of: LOC113839892
location: join(422943..422982,423207..423536,423630..423824,424069..424190,424345..424377)
location: region:422943-424377:1
so has part: feature:422943-422982:1:exon
so has part: feature:423207-423536:1:exon
so has part: feature:423630-423824:1:exon
so has part: feature:424069-424190:1:exon
so has part: feature:424345-424377:1:exon

XP_038023799.1
type: Protein
SIO_000068: ncbiprotein

position:424377:1
position: 424377
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:422943-422982:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:423207-423536:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:423630-423824:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:424069-424190:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:424345-424377:1:exon

LOC113839892
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8839
gene: LOC113839892
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: M1-specific T cell receptor beta chain-like isoform X10
translation: MCSLPGVLLLLLTGAASAKEPWIQESPAQLWVSPGETAKLSCSISGSPWHANWYREKPDGSLEWIYESTAASKPNGKYSGMMRARGIFPLNISDVQREDSGYYYCTSSVSHSQFGKGTRLLVTDASEPKLSILVPVDAEEPSDFVPLLCHLPGSWNLTWVSAEHWNGAMNCTATERGTGRIVSETIGTGCFLWLLAFVPPGAAVLALMWWAARLRRRPARAVLRRGPEPECEYAALGH
SIO_010081: LOC113839892
subclass of: SO_0000673
so part of: LOC113839892
location: join(422943..422982,423207..423536,423630..423824,424072..424190,424345..424377)
location: region:422943-424377:1
so has part: feature:422943-422982:1:exon
so has part: feature:423207-423536:1:exon
so has part: feature:423630-423824:1:exon
so has part: feature:424072-424190:1:exon
so has part: feature:424345-424377:1:exon

XP_038023802.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:422943-422982:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:423207-423536:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:423630-423824:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:424072-424190:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:424345-424377:1:exon

LOC113839888
type: Gene
subclass of: SO_0000704
RO_0002162: 8839
gene: LOC113839888
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(425925..446335)
location: region:425925-446335:-1
so has part: feature:425925-446335:-1:exon
subclass of: SO_0000010

113839888
type: Gene
SIO_000068: ncbigene

position:425925:-1
position: 425925
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:446335:-1
position: 446335
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:425925-446335:-1:exon

LOC113839888
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8839
gene: LOC113839888
product: uncharacterized LOC113839888, transcript variant X6
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_038167856.1
SIO_010081: LOC113839888
subclass of: SO_0000673
so part of: LOC113839888
location: complement(join(425925..426279,426401..426447,426593..426655,427100..427378,427630..427953,428078..428192,444740..446335))
location: region:425925-446335:-1
so has part: feature:444740-446335:-1:exon
so has part: feature:428078-428192:-1:exon
so has part: feature:427630-427953:-1:exon
so has part: feature:427100-427378:-1:exon
so has part: feature:426593-426655:-1:exon
so has part: feature:426401-426447:-1:exon
so has part: feature:425925-426279:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:444740-446335:-1:exon

position:444740:-1
position: 444740
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:428078-428192:-1:exon

position:428078:-1
position: 428078
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:428192:-1
position: 428192
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:427630-427953:-1:exon

position:427630:-1
position: 427630
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:427953:-1
position: 427953
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:427100-427378:-1:exon

position:427100:-1
position: 427100
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:427378:-1
position: 427378
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:426593-426655:-1:exon

position:426593:-1
position: 426593
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:426655:-1
position: 426655
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:426401-426447:-1:exon

position:426401:-1
position: 426401
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:426447:-1
position: 426447
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:425925-426279:-1:exon

position:426279:-1
position: 426279
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC113839888
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8839
gene: LOC113839888
product: uncharacterized LOC113839888, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_038167854.1
SIO_010081: LOC113839888
subclass of: SO_0000673
so part of: LOC113839888
location: complement(join(425925..426279,426401..426447,426593..426694,427100..427378,427630..427953,428078..428192,444740..446335))
location: region:425925-446335:-1
so has part: feature:444740-446335:-1:exon
so has part: feature:428078-428192:-1:exon
so has part: feature:427630-427953:-1:exon
so has part: feature:427100-427378:-1:exon
so has part: feature:426593-426694:-1:exon
so has part: feature:426401-426447:-1:exon
so has part: feature:425925-426279:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:444740-446335:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:428078-428192:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:427630-427953:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:427100-427378:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:426593-426694:-1:exon

position:426694:-1
position: 426694
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:426401-426447:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:425925-426279:-1:exon

LOC113839888
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8839
gene: LOC113839888
product: uncharacterized LOC113839888, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_038167851.1
SIO_010081: LOC113839888
subclass of: SO_0000673
so part of: LOC113839888
location: complement(join(425925..426279,426401..426447,426593..426721,427100..427378,427630..427953,428078..428192,444740..446334))
location: region:425925-446334:-1
so has part: feature:444740-446334:-1:exon
so has part: feature:428078-428192:-1:exon
so has part: feature:427630-427953:-1:exon
so has part: feature:427100-427378:-1:exon
so has part: feature:426593-426721:-1:exon
so has part: feature:426401-426447:-1:exon
so has part: feature:425925-426279:-1:exon

position:446334:-1
position: 446334
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:444740-446334:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:428078-428192:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:427630-427953:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:427100-427378:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:426593-426721:-1:exon

position:426721:-1
position: 426721
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:426401-426447:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:425925-426279:-1:exon

LOC113839888
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8839
gene: LOC113839888
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: uncharacterized protein LOC113839888 isoform X6
translation: MPRARADDISRIPAEAAEGRCLGLLLQKRRWMEPPRDGSGREAPSLLPTAPAPTGAGMGTPRCRAAGGQVPAHSAPLQKTGTSTPMAPLGFSCTKALLATGLLLLWLAPATLLAVQQPQPFLFVEPSTPVDISCILDETQDGRGNVFWYRRVRGERPQLILSCLQVQGEFSCKYTKGRAVLHIAAAGSNHTGLYLCAYYINSRLKFGNGTALIVGDSWRAQSWVRVLAPHGSPSDPPGLVCAVGNASGPVLVSWPGGPRPQQVLGLGGSTEPLISPAGIAGGTGGLCEVRFNASGPPVRRSVELHGAKAGALLLLGLSLGVRCLLRARTGLRPRAPNPPAPQQQQGELTYAQLRFATPARAAP
SIO_010081: LOC113839888
subclass of: SO_0000673
so part of: LOC113839888
location: complement(join(426223..426279,426401..426447,426593..426655,427100..427378,427630..427953,428078..428192,444740..444946))
location: region:426223-444946:-1
so has part: feature:444740-444946:-1:exon
so has part: feature:428078-428192:-1:exon
so has part: feature:427630-427953:-1:exon
so has part: feature:427100-427378:-1:exon
so has part: feature:426593-426655:-1:exon
so has part: feature:426401-426447:-1:exon
so has part: feature:426223-426279:-1:exon

XP_038023784.1
type: Protein
SIO_000068: ncbiprotein

position:426223:-1
position: 426223
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:444946:-1
position: 444946
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:444740-444946:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:428078-428192:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:427630-427953:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:427100-427378:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:426593-426655:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:426401-426447:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:426223-426279:-1:exon

LOC113839888
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8839
gene: LOC113839888
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: uncharacterized protein LOC113839888 isoform X4
translation: MPRARADDISRIPAEAAEGRCLGLLLQKRRWMEPPRDGSGREAPSLLPTAPAPTGAGMGTPRCRAAGGQVPAHSAPLQKTGTSTPMAPLGFSCTKALLATGLLLLWLAPATLLAVQQPQPFLFVEPSTPVDISCILDETQDGRGNVFWYRRVRGERPQLILSCLQVQGEFSCKYTKGRAVLHIAAAGSNHTGLYLCAYYINSRLKFGNGTALIVGDSWRAQSWVRVLAPHGSPSDPPGLVCAVGNASGPVLVSWPGGPRPQQVLGLGGSTEPLISPAGIAGGTGGLCEVRFNASGPPVRRSVELHGAKGACTTPIVVAMAAAGALLLLGLSLGVRCLLRARTGLRPRAPNPPAPQQQQGELTYAQLRFATPARAAP
SIO_010081: LOC113839888
subclass of: SO_0000673
so part of: LOC113839888
location: complement(join(426223..426279,426401..426447,426593..426694,427100..427378,427630..427953,428078..428192,444740..444946))
location: region:426223-444946:-1
so has part: feature:444740-444946:-1:exon
so has part: feature:428078-428192:-1:exon
so has part: feature:427630-427953:-1:exon
so has part: feature:427100-427378:-1:exon
so has part: feature:426593-426694:-1:exon
so has part: feature:426401-426447:-1:exon
so has part: feature:426223-426279:-1:exon

XP_038023782.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:444740-444946:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:428078-428192:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:427630-427953:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:427100-427378:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:426593-426694:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:426401-426447:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:426223-426279:-1:exon

LOC113839888
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8839
gene: LOC113839888
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: uncharacterized protein LOC113839888 isoform X2
translation: MPRARADDISRIPAEAAEGRCLGLLLQKRRWMEPPRDGSGREAPSLLPTAPAPTGAGMGTPRCRAAGGQVPAHSAPLQKTGTSTPMAPLGFSCTKALLATGLLLLWLAPATLLAVQQPQPFLFVEPSTPVDISCILDETQDGRGNVFWYRRVRGERPQLILSCLQVQGEFSCKYTKGRAVLHIAAAGSNHTGLYLCAYYINSRLKFGNGTALIVGDSWRAQSWVRVLAPHGSPSDPPGLVCAVGNASGPVLVSWPGGPRPQQVLGLGGSTEPLISPAGIAGGTGGLCEVRFNASGPPVRRSVELHGAKDGWDKPAPPGACTTPIVVAMAAAGALLLLGLSLGVRCLLRARTGLRPRAPNPPAPQQQQGELTYAQLRFATPARAAP
SIO_010081: LOC113839888
subclass of: SO_0000673
so part of: LOC113839888
location: complement(join(426223..426279,426401..426447,426593..426721,427100..427378,427630..427953,428078..428192,444740..444946))
location: region:426223-444946:-1
so has part: feature:444740-444946:-1:exon
so has part: feature:428078-428192:-1:exon
so has part: feature:427630-427953:-1:exon
so has part: feature:427100-427378:-1:exon
so has part: feature:426593-426721:-1:exon
so has part: feature:426401-426447:-1:exon
so has part: feature:426223-426279:-1:exon

XP_038023779.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:444740-444946:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:428078-428192:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:427630-427953:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:427100-427378:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:426593-426721:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:426401-426447:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:426223-426279:-1:exon

LOC113839892
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8839
gene: LOC113839892
product: M1-specific T cell receptor beta chain-like, transcript variant X6
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 20 samples with support for all annotated introns
transcript id: XM_038167870.1
SIO_010081: LOC113839892
subclass of: SO_0000673
so part of: LOC113839892
location: join(428832..429430,435855..436184,436279..436473,436717..436838,436993..437150)
location: region:428832-437150:1
so has part: feature:428832-429430:1:exon
so has part: feature:435855-436184:1:exon
so has part: feature:436279-436473:1:exon
so has part: feature:436717-436838:1:exon
so has part: feature:436993-437150:1:exon

position:428832:1
position: 428832
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:437150:1
position: 437150
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:428832-429430:1:exon

position:429430:1
position: 429430
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:435855-436184:1:exon

position:435855:1
position: 435855
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:436184:1
position: 436184
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:436279-436473:1:exon

position:436279:1
position: 436279
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:436473:1
position: 436473
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:436717-436838:1:exon

position:436717:1
position: 436717
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:436838:1
position: 436838
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:436993-437150:1:exon

position:436993:1
position: 436993
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC113839892
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8839
gene: LOC113839892
product: M1-specific T cell receptor beta chain-like, transcript variant X9
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 21 samples with support for all annotated introns
transcript id: XM_038167873.1
SIO_010081: LOC113839892
subclass of: SO_0000673
so part of: LOC113839892
location: join(428832..429430,435855..436184,436279..436473,436720..436838,436993..437150)
location: region:428832-437150:1
so has part: feature:428832-429430:1:exon
so has part: feature:435855-436184:1:exon
so has part: feature:436279-436473:1:exon
so has part: feature:436720-436838:1:exon
so has part: feature:436993-437150:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:428832-429430:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:435855-436184:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:436279-436473:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:436720-436838:1:exon

position:436720:1
position: 436720
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:436993-437150:1:exon

LOC113839892
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8839
gene: LOC113839892
product: M1-specific T cell receptor beta chain-like, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 22 samples with support for all annotated introns
transcript id: XM_038167866.1
SIO_010081: LOC113839892
subclass of: SO_0000673
so part of: LOC113839892
location: join(428832..429430,429654..429983,430066..430260,430504..431039)
location: region:428832-431039:1
so has part: feature:428832-429430:1:exon
so has part: feature:429654-429983:1:exon
so has part: feature:430066-430260:1:exon
so has part: feature:430504-431039:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:428832-429430:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:429654-429983:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:430066-430260:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:430504-431039:1:exon

LOC113839892
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8839
gene: LOC113839892
product: M1-specific T cell receptor beta chain-like, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 22 samples with support for all annotated introns
transcript id: XM_038167868.1
SIO_010081: LOC113839892
subclass of: SO_0000673
so part of: LOC113839892
location: join(428832..429430,429654..429983,430066..430260,430507..431039)
location: region:428832-431039:1
so has part: feature:428832-429430:1:exon
so has part: feature:429654-429983:1:exon
so has part: feature:430066-430260:1:exon
so has part: feature:430507-431039:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:428832-429430:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:429654-429983:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:430066-430260:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:430507-431039:1:exon

position:430507:1
position: 430507
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC113839892
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8839
gene: LOC113839892
product: M1-specific T cell receptor beta chain-like, transcript variant X5
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 20 samples with support for all annotated introns
transcript id: XM_038167869.1
SIO_010081: LOC113839892
subclass of: SO_0000673
so part of: LOC113839892
location: join(428832..429430,429654..429983,430066..430260,430780..431039)
location: region:428832-431039:1
so has part: feature:428832-429430:1:exon
so has part: feature:429654-429983:1:exon
so has part: feature:430066-430260:1:exon
so has part: feature:430780-431039:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:428832-429430:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:429654-429983:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:430066-430260:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:430780-431039:1:exon

position:430780:1
position: 430780
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC113839892
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8839
gene: LOC113839892
product: M1-specific T cell receptor beta chain-like, transcript variant X11
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 22 samples with support for all annotated introns
transcript id: XM_038167875.1
SIO_010081: LOC113839892
subclass of: SO_0000673
so part of: LOC113839892
location: join(428832..429430,429654..429983,430066..430260,430507..430625,430780..431023)
location: region:428832-431023:1
so has part: feature:428832-429430:1:exon
so has part: feature:429654-429983:1:exon
so has part: feature:430066-430260:1:exon
so has part: feature:430507-430625:1:exon
so has part: feature:430780-431023:1:exon

position:431023:1
position: 431023
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:428832-429430:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:429654-429983:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:430066-430260:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:430507-430625:1:exon

position:430625:1
position: 430625
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:430780-431023:1:exon

LOC113839892
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8839
gene: LOC113839892
product: M1-specific T cell receptor beta chain-like, transcript variant X8
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 22 samples with support for all annotated introns
transcript id: XM_038167872.1
SIO_010081: LOC113839892
subclass of: SO_0000673
so part of: LOC113839892
location: join(428832..429430,429654..429983,430066..430260,430504..430625,430780..431015)
location: region:428832-431015:1
so has part: feature:428832-429430:1:exon
so has part: feature:429654-429983:1:exon
so has part: feature:430066-430260:1:exon
so has part: feature:430504-430625:1:exon
so has part: feature:430780-431015:1:exon

position:431015:1
position: 431015
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:428832-429430:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:429654-429983:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:430066-430260:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:430504-430625:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:430780-431015:1:exon

LOC113839892
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8839
gene: LOC113839892
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: immunoglobulin kappa light chain-like isoform X6
translation: MCSLPGVLLLLLTGATSAEEPWIQQSPAKLWLSPGMMAELSCSISDSPERANWYREKPDGSLEWIYWSTAASKPKGKYSGTVRAPGIFSLSISNVQREDSGYYYCTSSVLLSQFGKGTRLLVTDASEPKLSILVPVDAEEPSDFVSLLCHLPGAWNLTWVSGERWDGAMNCTATERGTGRIVSETIGTAGCFLWLLAFVPPGAAVLALMWWAARLRRRPARAVLRRGPEPECEYAALGH
SIO_010081: LOC113839892
subclass of: SO_0000673
so part of: LOC113839892
location: join(429391..429430,435855..436184,436279..436473,436717..436838,436993..437025)
location: region:429391-437025:1
so has part: feature:429391-429430:1:exon
so has part: feature:435855-436184:1:exon
so has part: feature:436279-436473:1:exon
so has part: feature:436717-436838:1:exon
so has part: feature:436993-437025:1:exon

XP_038023798.1
type: Protein
SIO_000068: ncbiprotein

position:429391:1
position: 429391
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:437025:1
position: 437025
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:429391-429430:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:435855-436184:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:436279-436473:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:436717-436838:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:436993-437025:1:exon

LOC113839892
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8839
gene: LOC113839892
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: immunoglobulin kappa light chain-like isoform X9
translation: MCSLPGVLLLLLTGATSAEEPWIQQSPAKLWLSPGMMAELSCSISDSPERANWYREKPDGSLEWIYWSTAASKPKGKYSGTVRAPGIFSLSISNVQREDSGYYYCTSSVLLSQFGKGTRLLVTDASEPKLSILVPVDAEEPSDFVSLLCHLPGAWNLTWVSGERWDGAMNCTATERGTGRIVSETIGTGCFLWLLAFVPPGAAVLALMWWAARLRRRPARAVLRRGPEPECEYAALGH
SIO_010081: LOC113839892
subclass of: SO_0000673
so part of: LOC113839892
location: join(429391..429430,435855..436184,436279..436473,436720..436838,436993..437025)
location: region:429391-437025:1
so has part: feature:429391-429430:1:exon
so has part: feature:435855-436184:1:exon
so has part: feature:436279-436473:1:exon
so has part: feature:436720-436838:1:exon
so has part: feature:436993-437025:1:exon

XP_038023801.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:429391-429430:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:435855-436184:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:436279-436473:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:436720-436838:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:436993-437025:1:exon

LOC113839892
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8839
gene: LOC113839892
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: uncharacterized protein LOC113839892 isoform X2
translation: MCSLPGVLLLLLTGAASVEELQIQQSPAELWLSPGATAELSCNISGSPEQANWYREKPDGSLERIYWSAAASKPKGRYSGTVKELFFFSLNISDVQREDSGYYYCTSSVLHSQFGNGTRLLVTDASEPKLSILVLVDAEEPSDFVSLQCHLPGAWNLTWVSAERWDGAMNCTATERGTGRIVSETIGTAGCFLWLLAFVPPGAAVLALMWWAARLRRRPARAVLRRGPEVSCFPSPRHEAVGTAGGRSSQAARPGALARAKHPLQLQAQPQARGFSLSLAARVRVRGAGALRSPFPAPALPEAAHACGLRAAKTREERESGGILRSAAFPCWAAWQRGRRNAESAAGSSIATRNCMQIIKS
SIO_010081: LOC113839892
subclass of: SO_0000673
so part of: LOC113839892
location: join(429391..429430,429654..429983,430066..430260,430504..431024)
location: region:429391-431024:1
so has part: feature:429391-429430:1:exon
so has part: feature:429654-429983:1:exon
so has part: feature:430066-430260:1:exon
so has part: feature:430504-431024:1:exon

XP_038023794.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:429391-429430:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:429654-429983:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:430066-430260:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:430504-431024:1:exon

LOC113839892
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8839
gene: LOC113839892
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: uncharacterized protein LOC113839892 isoform X4
translation: MCSLPGVLLLLLTGAASVEELQIQQSPAELWLSPGATAELSCNISGSPEQANWYREKPDGSLERIYWSAAASKPKGRYSGTVKELFFFSLNISDVQREDSGYYYCTSSVLHSQFGNGTRLLVTDASEPKLSILVLVDAEEPSDFVSLQCHLPGAWNLTWVSAERWDGAMNCTATERGTGRIVSETIGTGCFLWLLAFVPPGAAVLALMWWAARLRRRPARAVLRRGPEVSCFPSPRHEAVGTAGGRSSQAARPGALARAKHPLQLQAQPQARGFSLSLAARVRVRGAGALRSPFPAPALPEAAHACGLRAAKTREERESGGILRSAAFPCWAAWQRGRRNAESAAGSSIATRNCMQIIKS
SIO_010081: LOC113839892
subclass of: SO_0000673
so part of: LOC113839892
location: join(429391..429430,429654..429983,430066..430260,430507..431024)
location: region:429391-431024:1
so has part: feature:429391-429430:1:exon
so has part: feature:429654-429983:1:exon
so has part: feature:430066-430260:1:exon
so has part: feature:430507-431024:1:exon

XP_038023796.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:429391-429430:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:429654-429983:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:430066-430260:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:430507-431024:1:exon

LOC113839892
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8839
gene: LOC113839892
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: uncharacterized protein LOC113839892 isoform X5
translation: MCSLPGVLLLLLTGAASVEELQIQQSPAELWLSPGATAELSCNISGSPEQANWYREKPDGSLERIYWSAAASKPKGRYSGTVKELFFFSLNISDVQREDSGYYYCTSSVLHSQFGNGTRLLVTDASEPKLSILVLVDAEEPSDFVSLQCHLPGAWNLTWVSAERWDGAMNCTATERGTGRIVSETIGTARVRVRGAGALRSPFPAPALPEAAHACGLRAAKTREERESGGILRSAAFPCWAAWQRGRRNAESAAGSSIATRNCMQIIKS
SIO_010081: LOC113839892
subclass of: SO_0000673
so part of: LOC113839892
location: join(429391..429430,429654..429983,430066..430260,430780..431024)
location: region:429391-431024:1
so has part: feature:429391-429430:1:exon
so has part: feature:429654-429983:1:exon
so has part: feature:430066-430260:1:exon
so has part: feature:430780-431024:1:exon

XP_038023797.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:429391-429430:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:429654-429983:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:430066-430260:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:430780-431024:1:exon

LOC113839892
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8839
gene: LOC113839892
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: uncharacterized protein LOC113839892 isoform X8
translation: MCSLPGVLLLLLTGAASVEELQIQQSPAELWLSPGATAELSCNISGSPEQANWYREKPDGSLERIYWSAAASKPKGRYSGTVKELFFFSLNISDVQREDSGYYYCTSSVLHSQFGNGTRLLVTDASEPKLSILVLVDAEEPSDFVSLQCHLPGAWNLTWVSAERWDGAMNCTATERGTGRIVSETIGTAGCFLWLLAFVPPGAAVLALMWWAARLRRRPARAVLRRGPEPECEYAALGH
SIO_010081: LOC113839892
subclass of: SO_0000673
so part of: LOC113839892
location: join(429391..429430,429654..429983,430066..430260,430504..430625,430780..430812)
location: region:429391-430812:1
so has part: feature:429391-429430:1:exon
so has part: feature:429654-429983:1:exon
so has part: feature:430066-430260:1:exon
so has part: feature:430504-430625:1:exon
so has part: feature:430780-430812:1:exon

XP_038023800.1
type: Protein
SIO_000068: ncbiprotein

position:430812:1
position: 430812
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:429391-429430:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:429654-429983:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:430066-430260:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:430504-430625:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:430780-430812:1:exon

LOC113839892
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8839
gene: LOC113839892
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: uncharacterized protein LOC113839892 isoform X11
translation: MCSLPGVLLLLLTGAASVEELQIQQSPAELWLSPGATAELSCNISGSPEQANWYREKPDGSLERIYWSAAASKPKGRYSGTVKELFFFSLNISDVQREDSGYYYCTSSVLHSQFGNGTRLLVTDASEPKLSILVLVDAEEPSDFVSLQCHLPGAWNLTWVSAERWDGAMNCTATERGTGRIVSETIGTGCFLWLLAFVPPGAAVLALMWWAARLRRRPARAVLRRGPEPECEYAALGH
SIO_010081: LOC113839892
subclass of: SO_0000673
so part of: LOC113839892
location: join(429391..429430,429654..429983,430066..430260,430507..430625,430780..430812)
location: region:429391-430812:1
so has part: feature:429391-429430:1:exon
so has part: feature:429654-429983:1:exon
so has part: feature:430066-430260:1:exon
so has part: feature:430507-430625:1:exon
so has part: feature:430780-430812:1:exon

XP_038023803.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:429391-429430:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:429654-429983:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:430066-430260:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:430507-430625:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:430780-430812:1:exon

LOC113839888
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8839
gene: LOC113839888
product: uncharacterized LOC113839888, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_038167850.1
SIO_010081: LOC113839888
subclass of: SO_0000673
so part of: LOC113839888
location: complement(join(432348..432650,432818..432865,433004..433120,433527..433805,434064..434387,434512..434627,435092..435524))
location: region:432348-435524:-1
so has part: feature:435092-435524:-1:exon
so has part: feature:434512-434627:-1:exon
so has part: feature:434064-434387:-1:exon
so has part: feature:433527-433805:-1:exon
so has part: feature:433004-433120:-1:exon
so has part: feature:432818-432865:-1:exon
so has part: feature:432348-432650:-1:exon

position:432348:-1
position: 432348
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:435524:-1
position: 435524
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:435092-435524:-1:exon

position:435092:-1
position: 435092
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:434512-434627:-1:exon

position:434512:-1
position: 434512
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:434627:-1
position: 434627
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:434064-434387:-1:exon

position:434064:-1
position: 434064
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:434387:-1
position: 434387
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:433527-433805:-1:exon

position:433527:-1
position: 433527
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:433805:-1
position: 433805
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:433004-433120:-1:exon

position:433004:-1
position: 433004
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:433120:-1
position: 433120
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:432818-432865:-1:exon

position:432818:-1
position: 432818
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:432865:-1
position: 432865
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:432348-432650:-1:exon

position:432650:-1
position: 432650
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC113839888
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8839
gene: LOC113839888
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: uncharacterized protein LOC113839888 isoform X1
translation: MEARVCSGEEHDEHWGGRQGASGCLSELEEQRLLVEARPRCSSRRLRAELPEPRSAAVSLALLILSPLCCLFARNPCPPTPLPANRWLGRFLSPKLGAGVAKSHGCRTTTGKQGRAGGPELPLAFGPRPFERHRTRCTRPLCRRTGTSMPMAPLGFSCTKALLATGLLLLWLAPATLLAVQQPQPFLFVEPSTPVDISCILDETQDGRGNVFWYRRVRGERPRLILSCLQVQGEFSCKYTKGRAVLHIAAAGSNHTGLYLCAYYINSKLLFGNGTALIVGDSWRAQSWVRVLAPHGSPSDPPGLVCAVGNASGPVLVSWPGGPRPQQVLGLGGSTELLISPAGIAGGTGGLCEVRFNASGPPVRRSVELHGAKDGWDKPPPPSACTTPSAVARALLLLGLILGICCLFHAWRGLRPRAPDPPASPAPAGRADVRPAPLRHPSEGSAVTHGAGPQGLGGGAVQPWEAAAAPAAGTAGRKERDRTSKEGARRSSE
SIO_010081: LOC113839888
subclass of: SO_0000673
so part of: LOC113839888
location: complement(join(432454..432650,432818..432865,433004..433120,433527..433805,434064..434387,434512..434627,435092..435492))
location: region:432454-435492:-1
so has part: feature:435092-435492:-1:exon
so has part: feature:434512-434627:-1:exon
so has part: feature:434064-434387:-1:exon
so has part: feature:433527-433805:-1:exon
so has part: feature:433004-433120:-1:exon
so has part: feature:432818-432865:-1:exon
so has part: feature:432454-432650:-1:exon

XP_038023778.1
type: Protein
SIO_000068: ncbiprotein

position:432454:-1
position: 432454
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:435492:-1
position: 435492
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:435092-435492:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:434512-434627:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:434064-434387:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:433527-433805:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:433004-433120:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:432818-432865:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:432454-432650:-1:exon

LOC113839892
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8839
gene: LOC113839892
product: M1-specific T cell receptor beta chain-like, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 9 samples with support for all annotated introns
transcript id: XM_038167865.1
SIO_010081: LOC113839892
subclass of: SO_0000673
so part of: LOC113839892
location: join(435501..435630,435855..436184,436279..436473,436717..437456)
location: region:435501-437456:1
so has part: feature:435501-435630:1:exon
so has part: feature:435855-436184:1:exon
so has part: feature:436279-436473:1:exon
so has part: feature:436717-437456:1:exon

position:435501:1
position: 435501
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:435501-435630:1:exon

position:435630:1
position: 435630
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:435855-436184:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:436279-436473:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:436717-437456:1:exon

LOC113839892
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8839
gene: LOC113839892
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: uncharacterized protein LOC113839892 isoform X1
translation: MCSLPGVLLLLLTGATSAEEPWIQQSPAKLWLSPGMMAELSCSISDSPERANWYREKPDGSLEWIYWSTAASKPKGKYSGTVRAPGIFSLSISNVQREDSGYYYCTSSVLLSQFGKGTRLLVTDASEPKLSILVPVDAEEPSDFVSLLCHLPGAWNLTWVSGERWDGAMNCTATERGTGRIVSETIGTAGCFLWLLAFVPPGAAVLALMWWAARLRRRPARAVLRRGPEVSCFPSPRHEAVGTAGGRSSQAARPGALARAKHPLQLQAQPQARGFSLSLAARVRVRGAGALRSPFPAPALPEAAHACGLRAAKTREERESGGILRSAAFPCWAAWQRGRRNAESAAGSSIAMRDPMQIIKLLYATEVSQLHWDRSLCYPV
SIO_010081: LOC113839892
subclass of: SO_0000673
so part of: LOC113839892
location: join(435591..435630,435855..436184,436279..436473,436717..437294)
location: region:435591-437294:1
so has part: feature:435591-435630:1:exon
so has part: feature:435855-436184:1:exon
so has part: feature:436279-436473:1:exon
so has part: feature:436717-437294:1:exon

XP_038023793.1
type: Protein
SIO_000068: ncbiprotein

position:435591:1
position: 435591
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:437294:1
position: 437294
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:435591-435630:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:435855-436184:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:436279-436473:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:436717-437294:1:exon

LOC113839888
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8839
gene: LOC113839888
product: uncharacterized LOC113839888, transcript variant X7
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
transcript id: XM_038167857.1
SIO_010081: LOC113839888
subclass of: SO_0000673
so part of: LOC113839888
location: complement(join(438591..438845,438967..439013,439663..439941,440203..440529,440634..440749,444740..446334))
location: region:438591-446334:-1
so has part: feature:444740-446334:-1:exon
so has part: feature:440634-440749:-1:exon
so has part: feature:440203-440529:-1:exon
so has part: feature:439663-439941:-1:exon
so has part: feature:438967-439013:-1:exon
so has part: feature:438591-438845:-1:exon

position:438591:-1
position: 438591
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:444740-446334:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:440634-440749:-1:exon

position:440634:-1
position: 440634
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:440749:-1
position: 440749
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:440203-440529:-1:exon

position:440203:-1
position: 440203
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:440529:-1
position: 440529
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:439663-439941:-1:exon

position:439663:-1
position: 439663
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:439941:-1
position: 439941
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:438967-439013:-1:exon

position:438967:-1
position: 438967
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:439013:-1
position: 439013
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:438591-438845:-1:exon

position:438845:-1
position: 438845
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC113839888
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8839
gene: LOC113839888
product: uncharacterized LOC113839888, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 10 samples with support for all annotated introns
transcript id: XM_038167852.1
SIO_010081: LOC113839888
subclass of: SO_0000673
so part of: LOC113839888
location: complement(join(438591..438845,438967..439013,439154..439282,439663..439941,440203..440529,440634..440749,444740..446332))
location: region:438591-446332:-1
so has part: feature:444740-446332:-1:exon
so has part: feature:440634-440749:-1:exon
so has part: feature:440203-440529:-1:exon
so has part: feature:439663-439941:-1:exon
so has part: feature:439154-439282:-1:exon
so has part: feature:438967-439013:-1:exon
so has part: feature:438591-438845:-1:exon

position:446332:-1
position: 446332
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:444740-446332:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:440634-440749:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:440203-440529:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:439663-439941:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:439154-439282:-1:exon

position:439154:-1
position: 439154
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:439282:-1
position: 439282
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:438967-439013:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:438591-438845:-1:exon

LOC113839888
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8839
gene: LOC113839888
product: uncharacterized LOC113839888, transcript variant X5
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 16 samples with support for all annotated introns
transcript id: XM_038167855.1
SIO_010081: LOC113839888
subclass of: SO_0000673
so part of: LOC113839888
location: complement(join(438591..438845,438967..439013,439154..439255,439663..439941,440203..440529,440634..440749,444740..446331))
location: region:438591-446331:-1
so has part: feature:444740-446331:-1:exon
so has part: feature:440634-440749:-1:exon
so has part: feature:440203-440529:-1:exon
so has part: feature:439663-439941:-1:exon
so has part: feature:439154-439255:-1:exon
so has part: feature:438967-439013:-1:exon
so has part: feature:438591-438845:-1:exon

position:446331:-1
position: 446331
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:444740-446331:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:440634-440749:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:440203-440529:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:439663-439941:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:439154-439255:-1:exon

position:439255:-1
position: 439255
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:438967-439013:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:438591-438845:-1:exon

LOC113839888
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8839
gene: LOC113839888
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: uncharacterized protein LOC113839888 isoform X7
translation: MTLAGFLRKQPKDVVWGFCCRREDGWSHPAMGVGGKPPACSPRRLHPRVLGWGPRGAAQRVDRTRCTRPLCRRTGTSTPMAPLGFSCTEALLATGLLLLWLAPATLLKVHQPQPFLFVEPSTPVAISCVMDETLDGQHNTLWYRRVRGERPRFILSCDQEVQDGFSCEYTKGRAVLHIAAARPDHIGLYLCACISGSKLLFGNGTALIVGDSWRAQSWVRVLAPHGSPSDPPGLVCAVGNASGPVLVSWPGGPRPQQVLGLGGSTEPLISPAGIAGGTGGLCEVRFNASGPPVRRSVELHGAKGLRPRAPNPPAPQHQQGELTYAQLRFATPARAAP
SIO_010081: LOC113839888
subclass of: SO_0000673
so part of: LOC113839888
location: complement(join(438789..438845,438967..439013,439663..439941,440203..440529,440634..440749,444740..444927))
location: region:438789-444927:-1
so has part: feature:444740-444927:-1:exon
so has part: feature:440634-440749:-1:exon
so has part: feature:440203-440529:-1:exon
so has part: feature:439663-439941:-1:exon
so has part: feature:438967-439013:-1:exon
so has part: feature:438789-438845:-1:exon

XP_038023785.1
type: Protein
SIO_000068: ncbiprotein

position:438789:-1
position: 438789
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:444927:-1
position: 444927
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:444740-444927:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:440634-440749:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:440203-440529:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:439663-439941:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:438967-439013:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:438789-438845:-1:exon

LOC113839888
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8839
gene: LOC113839888
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: uncharacterized protein LOC113839888 isoform X5
translation: MTLAGFLRKQPKDVVWGFCCRREDGWSHPAMGVGGKPPACSPRRLHPRVLGWGPRGAAQRVDRTRCTRPLCRRTGTSTPMAPLGFSCTEALLATGLLLLWLAPATLLKVHQPQPFLFVEPSTPVAISCVMDETLDGQHNTLWYRRVRGERPRFILSCDQEVQDGFSCEYTKGRAVLHIAAARPDHIGLYLCACISGSKLLFGNGTALIVGDSWRAQSWVRVLAPHGSPSDPPGLVCAVGNASGPVLVSWPGGPRPQQVLGLGGSTEPLISPAGIAGGTGGLCEVRFNASGPPVRRSVELHGAKGACTTPSVVAMAAAGALLLLGLSLSVRCLLRARTGLRPRAPNPPAPQHQQGELTYAQLRFATPARAAP
SIO_010081: LOC113839888
subclass of: SO_0000673
so part of: LOC113839888
location: complement(join(438789..438845,438967..439013,439154..439255,439663..439941,440203..440529,440634..440749,444740..444927))
location: region:438789-444927:-1
so has part: feature:444740-444927:-1:exon
so has part: feature:440634-440749:-1:exon
so has part: feature:440203-440529:-1:exon
so has part: feature:439663-439941:-1:exon
so has part: feature:439154-439255:-1:exon
so has part: feature:438967-439013:-1:exon
so has part: feature:438789-438845:-1:exon

XP_038023783.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:444740-444927:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:440634-440749:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:440203-440529:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:439663-439941:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:439154-439255:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:438967-439013:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:438789-438845:-1:exon

LOC113839888
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8839
gene: LOC113839888
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: uncharacterized protein LOC113839888 isoform X3
translation: MTLAGFLRKQPKDVVWGFCCRREDGWSHPAMGVGGKPPACSPRRLHPRVLGWGPRGAAQRVDRTRCTRPLCRRTGTSTPMAPLGFSCTEALLATGLLLLWLAPATLLKVHQPQPFLFVEPSTPVAISCVMDETLDGQHNTLWYRRVRGERPRFILSCDQEVQDGFSCEYTKGRAVLHIAAARPDHIGLYLCACISGSKLLFGNGTALIVGDSWRAQSWVRVLAPHGSPSDPPGLVCAVGNASGPVLVSWPGGPRPQQVLGLGGSTEPLISPAGIAGGTGGLCEVRFNASGPPVRRSVELHGAKDGWDKWPPPGACTTPSVVAMAAAGALLLLGLSLSVRCLLRARTGLRPRAPNPPAPQHQQGELTYAQLRFATPARAAP
SIO_010081: LOC113839888
subclass of: SO_0000673
so part of: LOC113839888
location: complement(join(438789..438845,438967..439013,439154..439282,439663..439941,440203..440529,440634..440749,444740..444927))
location: region:438789-444927:-1
so has part: feature:444740-444927:-1:exon
so has part: feature:440634-440749:-1:exon
so has part: feature:440203-440529:-1:exon
so has part: feature:439663-439941:-1:exon
so has part: feature:439154-439282:-1:exon
so has part: feature:438967-439013:-1:exon
so has part: feature:438789-438845:-1:exon

XP_038023780.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:444740-444927:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:440634-440749:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:440203-440529:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:439663-439941:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:439154-439282:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:438967-439013:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:438789-438845:-1:exon

LOC119713798
type: Gene
subclass of: SO_0000704
RO_0002162: 8839
gene: LOC119713798
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 441407..443737
location: region:441407-443737:1
so has part: feature:441407-443737:1:exon
subclass of: SO_0000010

119713798
type: Gene
SIO_000068: ncbigene

position:441407:1
position: 441407
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:443737:1
position: 443737
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:441407-443737:1:exon

LOC119713798
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8839
gene: LOC119713798
product: immunoglobulin kappa light chain-like, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 23 samples with support for all annotated introns
transcript id: XM_038167878.1
SIO_010081: LOC119713798
subclass of: SO_0000673
so part of: LOC119713798
location: join(441407..441732,442355..442684,442767..442961,443482..443737)
location: region:441407-443737:1
so has part: feature:441407-441732:1:exon
so has part: feature:442355-442684:1:exon
so has part: feature:442767-442961:1:exon
so has part: feature:443482-443737:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:441407-441732:1:exon

position:441732:1
position: 441732
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:442355-442684:1:exon

position:442355:1
position: 442355
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:442684:1
position: 442684
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:442767-442961:1:exon

position:442767:1
position: 442767
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:442961:1
position: 442961
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:443482-443737:1:exon

position:443482:1
position: 443482
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC119713798
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8839
gene: LOC119713798
product: immunoglobulin kappa light chain-like, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 26 samples with support for all annotated introns
transcript id: XM_038167879.1
SIO_010081: LOC119713798
subclass of: SO_0000673
so part of: LOC119713798
location: join(441407..441732,442355..442684,442767..442961,443206..443327,443482..443660)
location: region:441407-443660:1
so has part: feature:441407-441732:1:exon
so has part: feature:442355-442684:1:exon
so has part: feature:442767-442961:1:exon
so has part: feature:443206-443327:1:exon
so has part: feature:443482-443660:1:exon

position:443660:1
position: 443660
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:441407-441732:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:442355-442684:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:442767-442961:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:443206-443327:1:exon

position:443206:1
position: 443206
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:443327:1
position: 443327
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:443482-443660:1:exon

LOC119713798
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8839
gene: LOC119713798
product: immunoglobulin kappa light chain-like, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 26 samples with support for all annotated introns
transcript id: XM_038167880.1
SIO_010081: LOC119713798
subclass of: SO_0000673
so part of: LOC119713798
location: join(441407..441732,442355..442684,442767..442961,443209..443327,443482..443660)
location: region:441407-443660:1
so has part: feature:441407-441732:1:exon
so has part: feature:442355-442684:1:exon
so has part: feature:442767-442961:1:exon
so has part: feature:443209-443327:1:exon
so has part: feature:443482-443660:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:441407-441732:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:442355-442684:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:442767-442961:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:443209-443327:1:exon

position:443209:1
position: 443209
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:443482-443660:1:exon

LOC119713798
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8839
gene: LOC119713798
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: immunoglobulin gamma-1 heavy chain-like isoform X1
translation: MCSLPGVLLLLLTGAASVEEPQIQQSPAELWLSPGATAELNCSISGSPRRANWYREKPDGSLEWIYWSAAASKPNGKYSGMMRAWGIFSLSISNVQREDSGYYYCTSSVLHSQFGNGTRLLVTDASEPKVSILVPVDTEEPSDFVPLQCHLPGSWNLTWVSAERWDGAMNCTATERGTGRIVSETIGTARVRVRGAGALRSPFPAPALPEAAHACGLRAAKTREERESGGILRSAAFPCWAAWQRGRRNAESAAGSSMAMRNCMEIIKS
SIO_010081: LOC119713798
subclass of: SO_0000673
so part of: LOC119713798
location: join(441693..441732,442355..442684,442767..442961,443482..443726)
location: region:441693-443726:1
so has part: feature:441693-441732:1:exon
so has part: feature:442355-442684:1:exon
so has part: feature:442767-442961:1:exon
so has part: feature:443482-443726:1:exon

XP_038023806.1
type: Protein
SIO_000068: ncbiprotein

position:441693:1
position: 441693
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:443726:1
position: 443726
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:441693-441732:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:442355-442684:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:442767-442961:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:443482-443726:1:exon

LOC119713798
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8839
gene: LOC119713798
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: immunoglobulin kappa light chain-like isoform X2
translation: MCSLPGVLLLLLTGAASVEEPQIQQSPAELWLSPGATAELNCSISGSPRRANWYREKPDGSLEWIYWSAAASKPNGKYSGMMRAWGIFSLSISNVQREDSGYYYCTSSVLHSQFGNGTRLLVTDASEPKVSILVPVDTEEPSDFVPLQCHLPGSWNLTWVSAERWDGAMNCTATERGTGRIVSETIGTAGCFLWLLAFVPPGAAVLALMWWAARLRRRPARAVLRRGPEPECEYAALGH
SIO_010081: LOC119713798
subclass of: SO_0000673
so part of: LOC119713798
location: join(441693..441732,442355..442684,442767..442961,443206..443327,443482..443514)
location: region:441693-443514:1
so has part: feature:441693-441732:1:exon
so has part: feature:442355-442684:1:exon
so has part: feature:442767-442961:1:exon
so has part: feature:443206-443327:1:exon
so has part: feature:443482-443514:1:exon

XP_038023807.1
type: Protein
SIO_000068: ncbiprotein

position:443514:1
position: 443514
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:441693-441732:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:442355-442684:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:442767-442961:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:443206-443327:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:443482-443514:1:exon

LOC119713798
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8839
gene: LOC119713798
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: immunoglobulin kappa light chain-like isoform X3
translation: MCSLPGVLLLLLTGAASVEEPQIQQSPAELWLSPGATAELNCSISGSPRRANWYREKPDGSLEWIYWSAAASKPNGKYSGMMRAWGIFSLSISNVQREDSGYYYCTSSVLHSQFGNGTRLLVTDASEPKVSILVPVDTEEPSDFVPLQCHLPGSWNLTWVSAERWDGAMNCTATERGTGRIVSETIGTGCFLWLLAFVPPGAAVLALMWWAARLRRRPARAVLRRGPEPECEYAALGH
SIO_010081: LOC119713798
subclass of: SO_0000673
so part of: LOC119713798
location: join(441693..441732,442355..442684,442767..442961,443209..443327,443482..443514)
location: region:441693-443514:1
so has part: feature:441693-441732:1:exon
so has part: feature:442355-442684:1:exon
so has part: feature:442767-442961:1:exon
so has part: feature:443209-443327:1:exon
so has part: feature:443482-443514:1:exon

XP_038023808.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:441693-441732:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:442355-442684:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:442767-442961:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:443209-443327:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:443482-443514:1:exon

ANP32E
type: Gene
subclass of: SO_0000704
RO_0002162: 8839
gene: ANP32E
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 453454..465780
location: region:453454-465780:1
so has part: feature:453454-465780:1:exon
subclass of: SO_0000010

101802972
type: Gene
SIO_000068: ncbigene

position:453454:1
position: 453454
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:465780:1
position: 465780
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:453454-465780:1:exon

ANP32E
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8839
gene: ANP32E
product: acidic nuclear phosphoprotein 32 family member E, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 9 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 126 samples with support for all annotated introns
transcript id: XM_027444476.2
SIO_010081: ANP32E
subclass of: SO_0000673
so part of: ANP32E
location: join(453454..453753,455562..455711,456073..456195,457578..457743,459260..459417,461066..461120,462926..465780)
location: region:453454-465780:1
so has part: feature:453454-453753:1:exon
so has part: feature:455562-455711:1:exon
so has part: feature:456073-456195:1:exon
so has part: feature:457578-457743:1:exon
so has part: feature:459260-459417:1:exon
so has part: feature:461066-461120:1:exon
so has part: feature:462926-465780:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:453454-453753:1:exon

position:453753:1
position: 453753
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:455562-455711:1:exon

position:455562:1
position: 455562
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:455711:1
position: 455711
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:456073-456195:1:exon

position:456073:1
position: 456073
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:456195:1
position: 456195
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:457578-457743:1:exon

position:457578:1
position: 457578
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:457743:1
position: 457743
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:459260-459417:1:exon

position:459260:1
position: 459260
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:459417:1
position: 459417
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:461066-461120:1:exon

position:461066:1
position: 461066
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:461120:1
position: 461120
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:462926-465780:1:exon

position:462926:1
position: 462926
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

ANP32E
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8839
gene: ANP32E
product: acidic nuclear phosphoprotein 32 family member E, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 8 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 126 samples with support for all annotated introns
transcript id: XM_027444475.2
SIO_010081: ANP32E
subclass of: SO_0000673
so part of: ANP32E
location: join(453456..453753,455562..455711,456073..456195,457578..457743,459257..459417,461066..461120,462929..465780)
location: region:453456-465780:1
so has part: feature:453456-453753:1:exon
so has part: feature:455562-455711:1:exon
so has part: feature:456073-456195:1:exon
so has part: feature:457578-457743:1:exon
so has part: feature:459257-459417:1:exon
so has part: feature:461066-461120:1:exon
so has part: feature:462929-465780:1:exon

position:453456:1
position: 453456
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:453456-453753:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:455562-455711:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:456073-456195:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:457578-457743:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:459257-459417:1:exon

position:459257:1
position: 459257
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:461066-461120:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:462929-465780:1:exon

position:462929:1
position: 462929
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

ANP32E
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8839
gene: ANP32E
product: acidic nuclear phosphoprotein 32 family member E, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 10 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 126 samples with support for all annotated introns
transcript id: XM_027444474.2
SIO_010081: ANP32E
subclass of: SO_0000673
so part of: ANP32E
location: join(453457..453753,455562..455711,456073..456195,457578..457743,459257..459417,461066..461120,462926..465780)
location: region:453457-465780:1
so has part: feature:453457-453753:1:exon
so has part: feature:455562-455711:1:exon
so has part: feature:456073-456195:1:exon
so has part: feature:457578-457743:1:exon
so has part: feature:459257-459417:1:exon
so has part: feature:461066-461120:1:exon
so has part: feature:462926-465780:1:exon

position:453457:1
position: 453457
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:453457-453753:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:455562-455711:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:456073-456195:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:457578-457743:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:459257-459417:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:461066-461120:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:462926-465780:1:exon

ANP32E
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8839
gene: ANP32E
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: acidic leucine-rich nuclear phosphoprotein 32 family member E isoform X1
translation: MEMKKRINLELRNQAPEEVTELVLDNCRSSNGEIEGLNDSFKELEFLSMANVQLTSLAKLPTLSKLRKLELSDNIISGGLEVLAERCPNLTYLNLSGNKIKDLGTVEALQNLKNLKSLDLFSCEITNLEDYRDSIFDLLQQITYLDGFDQEDNEAPDSEDEDDEEGDEDDNDEDEDEAGPPGEYEEEDDEDDGGSDLGEGEEEEEEVGLSYLMKEEIQDEDDDDDYVEEGGDEEEEAEGIRGEKRKRDPEDEGEEEDD
SIO_010081: ANP32E
subclass of: SO_0000673
so part of: ANP32E
location: join(453700..453753,455562..455711,456073..456195,457578..457743,459257..459417,461066..461120,462926..462993)
location: region:453700-462993:1
so has part: feature:453700-453753:1:exon
so has part: feature:455562-455711:1:exon
so has part: feature:456073-456195:1:exon
so has part: feature:457578-457743:1:exon
so has part: feature:459257-459417:1:exon
so has part: feature:461066-461120:1:exon
so has part: feature:462926-462993:1:exon

XP_027300275.1
type: Protein
SIO_000068: ncbiprotein

position:453700:1
position: 453700
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:462993:1
position: 462993
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:453700-453753:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:455562-455711:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:456073-456195:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:457578-457743:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:459257-459417:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:461066-461120:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:462926-462993:1:exon

ANP32E
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8839
gene: ANP32E
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: acidic leucine-rich nuclear phosphoprotein 32 family member E isoform X2
translation: MEMKKRINLELRNQAPEEVTELVLDNCRSSNGEIEGLNDSFKELEFLSMANVQLTSLAKLPTLSKLRKLELSDNIISGGLEVLAERCPNLTYLNLSGNKIKDLGTVEALQNLKNLKSLDLFSCEITNLEDYRDSIFDLLQQITYLDGFDQEDNEAPDSEDEDDEEGDEDDNDEDEDEAGPPGEYEEEDDEDDGGSDLGEGEEEEEEVGLSYLMKEEIQDEDDDDDYVEEGGDEEEEEGIRGEKRKRDPEDEGEEEDD
SIO_010081: ANP32E
subclass of: SO_0000673
so part of: ANP32E
location: join(453700..453753,455562..455711,456073..456195,457578..457743,459257..459417,461066..461120,462929..462993)
location: region:453700-462993:1
so has part: feature:453700-453753:1:exon
so has part: feature:455562-455711:1:exon
so has part: feature:456073-456195:1:exon
so has part: feature:457578-457743:1:exon
so has part: feature:459257-459417:1:exon
so has part: feature:461066-461120:1:exon
so has part: feature:462929-462993:1:exon

XP_027300276.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:453700-453753:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:455562-455711:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:456073-456195:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:457578-457743:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:459257-459417:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:461066-461120:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:462929-462993:1:exon

ANP32E
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8839
gene: ANP32E
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: acidic leucine-rich nuclear phosphoprotein 32 family member E isoform X3
translation: MEMKKRINLELRNQAPEEVTELVLDNCRSSNGEIEGLNDSFKELEFLSMANVQLTSLAKLPTLSKLRKLELSDNIISGGLEVLAERCPNLTYLNLSGNKIKDLGTVEALQNLKNLKSLDLFSCEITNLEDYRDSIFDLLQQITYLDGFDQEDNEAPDSEDEDDEGDEDDNDEDEDEAGPPGEYEEEDDEDDGGSDLGEGEEEEEEVGLSYLMKEEIQDEDDDDDYVEEGGDEEEEAEGIRGEKRKRDPEDEGEEEDD
SIO_010081: ANP32E
subclass of: SO_0000673
so part of: ANP32E
location: join(453700..453753,455562..455711,456073..456195,457578..457743,459260..459417,461066..461120,462926..462993)
location: region:453700-462993:1
so has part: feature:453700-453753:1:exon
so has part: feature:455562-455711:1:exon
so has part: feature:456073-456195:1:exon
so has part: feature:457578-457743:1:exon
so has part: feature:459260-459417:1:exon
so has part: feature:461066-461120:1:exon
so has part: feature:462926-462993:1:exon

XP_027300277.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:453700-453753:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:455562-455711:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:456073-456195:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:457578-457743:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:459260-459417:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:461066-461120:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:462926-462993:1:exon

LOC106020224
type: Gene
subclass of: SO_0000704
RO_0002162: 8839
gene: LOC106020224
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(469477..473905)
location: region:469477-473905:-1
so has part: feature:469477-473905:-1:exon
subclass of: SO_0000011

106020224
type: Gene
SIO_000068: ncbigene

position:469477:-1
position: 469477
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:473905:-1
position: 473905
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:469477-473905:-1:exon

LOC106020224
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 8839
nc RNA class: lncRNA
gene: LOC106020224
product: uncharacterized LOC106020224
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 14 samples with support for all annotated introns
transcript id: XR_003492521.2
SIO_010081: LOC106020224
subclass of: SO_0000673
so part of: LOC106020224
location: complement(join(469477..471741,473692..473905))
location: region:469477-473905:-1
so has part: feature:473692-473905:-1:exon
so has part: feature:469477-471741:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:473692-473905:-1:exon

position:473692:-1
position: 473692
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:469477-471741:-1:exon

position:471741:-1
position: 471741
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC106020225
type: Gene
subclass of: SO_0000704
RO_0002162: 8839
gene: LOC106020225
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 474087..479092
location: region:474087-479092:1
so has part: feature:474087-479092:1:exon
subclass of: SO_0000010

106020225
type: Gene
SIO_000068: ncbigene

position:474087:1
position: 474087
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:479092:1
position: 479092
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:474087-479092:1:exon

LOC106020225
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8839
gene: LOC106020225
product: uncharacterized LOC106020225
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 10 samples with support for all annotated introns
transcript id: XM_038167877.1
SIO_010081: LOC106020225
subclass of: SO_0000673
so part of: LOC106020225
location: join(474087..476130,478121..478209,478853..479092)
location: region:474087-479092:1
so has part: feature:474087-476130:1:exon
so has part: feature:478121-478209:1:exon
so has part: feature:478853-479092:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:474087-476130:1:exon

position:476130:1
position: 476130
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:478121-478209:1:exon

position:478121:1
position: 478121
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:478209:1
position: 478209
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:478853-479092:1:exon

position:478853:1
position: 478853
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC106020225
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8839
gene: LOC106020225
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: uncharacterized protein LOC106020225
translation: MLLCAVLIIRSVSAPLTHRALGEIMAIKKTSAAVLWKGRTKLYLFIYLVLRQLRLYGEICLSFSEKAREGTRGRISCILFWSDLVWQLPVTVLVVLVVLVMLVVLVMLVVLVMLVMLVVLVMLVMLVMLVMLVMLVMLVMLVMLVMLVLRSLSWAAPTDCSMHQAGLGLPTVTLPSFCAFAALRGIFLLLLCACTPPSRAGEKETTPGGTCAGFSPPLLLREGNGGERKGASLKPKAINQTSKQNQFHACLPMGMRISFSINFRDSARPPGGAQVPRSGSGPRLCRDEHQRAPCARRGARVAFGNATFCRALGSSAAFISLNLIFQG
SIO_010081: LOC106020225
subclass of: SO_0000673
so part of: LOC106020225
location: 474485..475468
location: region:474485-475468:1
so has part: feature:474485-475468:1:exon

XP_038023805.1
type: Protein
SIO_000068: ncbiprotein

position:474485:1
position: 474485
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:475468:1
position: 475468
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:474485-475468:1:exon

PLEKHO1
type: Gene
subclass of: SO_0000704
RO_0002162: 8839
gene: PLEKHO1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(491509..507824)
location: region:491509-507824:-1
so has part: feature:491509-507824:-1:exon
subclass of: SO_0000010

106020226
type: Gene
SIO_000068: ncbigene

position:491509:-1
position: 491509
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:507824:-1
position: 507824
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:491509-507824:-1:exon

PLEKHO1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8839
gene: PLEKHO1
product: pleckstrin homology domain containing O1, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, 7 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 109 samples with support for all annotated introns
transcript id: XM_027444463.2
SIO_010081: PLEKHO1
subclass of: SO_0000673
so part of: PLEKHO1
location: complement(join(491509..493619,497173..497939,498409..498510,499259..499363,499878..500018,506560..506706,507512..507824))
location: region:491509-507824:-1
so has part: feature:507512-507824:-1:exon
so has part: feature:506560-506706:-1:exon
so has part: feature:499878-500018:-1:exon
so has part: feature:499259-499363:-1:exon
so has part: feature:498409-498510:-1:exon
so has part: feature:497173-497939:-1:exon
so has part: feature:491509-493619:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:507512-507824:-1:exon

position:507512:-1
position: 507512
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:506560-506706:-1:exon

position:506560:-1
position: 506560
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:506706:-1
position: 506706
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:499878-500018:-1:exon

position:499878:-1
position: 499878
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:500018:-1
position: 500018
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:499259-499363:-1:exon

position:499259:-1
position: 499259
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:499363:-1
position: 499363
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:498409-498510:-1:exon

position:498409:-1
position: 498409
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:498510:-1
position: 498510
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:497173-497939:-1:exon

position:497173:-1
position: 497173
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:497939:-1
position: 497939
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:491509-493619:-1:exon

position:493619:-1
position: 493619
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

PLEKHO1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8839
gene: PLEKHO1
product: pleckstrin homology domain containing O1, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 96 samples with support for all annotated introns
transcript id: XM_027444464.2
SIO_010081: PLEKHO1
subclass of: SO_0000673
so part of: PLEKHO1
location: complement(join(495842..496902,497173..497939,498409..498510,499259..499363,499878..500018,506560..506697,507512..507822))
location: region:495842-507822:-1
so has part: feature:507512-507822:-1:exon
so has part: feature:506560-506697:-1:exon
so has part: feature:499878-500018:-1:exon
so has part: feature:499259-499363:-1:exon
so has part: feature:498409-498510:-1:exon
so has part: feature:497173-497939:-1:exon
so has part: feature:495842-496902:-1:exon

position:495842:-1
position: 495842
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:507822:-1
position: 507822
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:507512-507822:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:506560-506697:-1:exon

position:506697:-1
position: 506697
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:499878-500018:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:499259-499363:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:498409-498510:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:497173-497939:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:495842-496902:-1:exon

position:496902:-1
position: 496902
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

PLEKHO1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8839
gene: PLEKHO1
product: pleckstrin homology domain containing O1, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 7 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 123 samples with support for all annotated introns
transcript id: XM_027444462.2
SIO_010081: PLEKHO1
subclass of: SO_0000673
so part of: PLEKHO1
location: complement(join(495842..496902,497173..497939,498409..498510,499259..499363,499878..500018,506560..506706,507512..507821))
location: region:495842-507821:-1
so has part: feature:507512-507821:-1:exon
so has part: feature:506560-506706:-1:exon
so has part: feature:499878-500018:-1:exon
so has part: feature:499259-499363:-1:exon
so has part: feature:498409-498510:-1:exon
so has part: feature:497173-497939:-1:exon
so has part: feature:495842-496902:-1:exon

position:507821:-1
position: 507821
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:507512-507821:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:506560-506706:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:499878-500018:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:499259-499363:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:498409-498510:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:497173-497939:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:495842-496902:-1:exon

PLEKHO1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8839
gene: PLEKHO1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: pleckstrin homology domain-containing family O member 1 isoform X2
translation: MMKKTNSAKRDGNQQSAQPEKVGWVRKFCGKGIFREIWKNRYVVLKGDQLYISEKEVKDEKNVQEMFDLSDYEKCEELRKSKSRSKKNHSKFTLAHSRQPGNTAPNLIFLAVSPEEKESWINALNSAITRAKNRILDEVTVEEDSYLAHPTRDRAKIQHSRRPPTRGHLMAVASTSTSDGMLTLDLIQEEDASPEDHGTCEESFRVDLDKSVAHLAAGRRRSDSENVKAPEKGRTGSLPRREVTSWDRSAPRNDSFDKGTMYTPQVPKKLSHSEKNKCASMEEILSRRDSSAHRAVLRRGLEAQFASAEPEQLSRIQELVALKLEKTQELLTEVKGYGEGKRKAKDSNTSTSTTTSSSSSSSKSDSERILQESERLLGEASSTWSQAKRVLQEIRELRDLYKQFELQQSDSKPKQSSQAHYRKSMM
SIO_010081: PLEKHO1
subclass of: SO_0000673
so part of: PLEKHO1
location: complement(join(497175..497939,498409..498510,499259..499363,499878..500018,506560..506697,507512..507541))
location: region:497175-507541:-1
so has part: feature:507512-507541:-1:exon
so has part: feature:506560-506697:-1:exon
so has part: feature:499878-500018:-1:exon
so has part: feature:499259-499363:-1:exon
so has part: feature:498409-498510:-1:exon
so has part: feature:497175-497939:-1:exon

XP_027300265.1
type: Protein
SIO_000068: ncbiprotein

position:497175:-1
position: 497175
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:507541:-1
position: 507541
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:507512-507541:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:506560-506697:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:499878-500018:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:499259-499363:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:498409-498510:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:497175-497939:-1:exon

PLEKHO1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8839
gene: PLEKHO1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: pleckstrin homology domain-containing family O member 1 isoform X1
translation: MMKKTNSAKRGHQDGNQQSAQPEKVGWVRKFCGKGIFREIWKNRYVVLKGDQLYISEKEVKDEKNVQEMFDLSDYEKCEELRKSKSRSKKNHSKFTLAHSRQPGNTAPNLIFLAVSPEEKESWINALNSAITRAKNRILDEVTVEEDSYLAHPTRDRAKIQHSRRPPTRGHLMAVASTSTSDGMLTLDLIQEEDASPEDHGTCEESFRVDLDKSVAHLAAGRRRSDSENVKAPEKGRTGSLPRREVTSWDRSAPRNDSFDKGTMYTPQVPKKLSHSEKNKCASMEEILSRRDSSAHRAVLRRGLEAQFASAEPEQLSRIQELVALKLEKTQELLTEVKGYGEGKRKAKDSNTSTSTTTSSSSSSSKSDSERILQESERLLGEASSTWSQAKRVLQEIRELRDLYKQFELQQSDSKPKQSSQAHYRKSMM
SIO_010081: PLEKHO1
subclass of: SO_0000673
so part of: PLEKHO1
location: complement(join(497175..497939,498409..498510,499259..499363,499878..500018,506560..506706,507512..507541))
location: region:497175-507541:-1
so has part: feature:507512-507541:-1:exon
so has part: feature:506560-506706:-1:exon
so has part: feature:499878-500018:-1:exon
so has part: feature:499259-499363:-1:exon
so has part: feature:498409-498510:-1:exon
so has part: feature:497175-497939:-1:exon

XP_027300263.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:507512-507541:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:506560-506706:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:499878-500018:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:499259-499363:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:498409-498510:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:497175-497939:-1:exon

PLEKHO1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8839
gene: PLEKHO1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: pleckstrin homology domain-containing family O member 1 isoform X1
translation: MMKKTNSAKRGHQDGNQQSAQPEKVGWVRKFCGKGIFREIWKNRYVVLKGDQLYISEKEVKDEKNVQEMFDLSDYEKCEELRKSKSRSKKNHSKFTLAHSRQPGNTAPNLIFLAVSPEEKESWINALNSAITRAKNRILDEVTVEEDSYLAHPTRDRAKIQHSRRPPTRGHLMAVASTSTSDGMLTLDLIQEEDASPEDHGTCEESFRVDLDKSVAHLAAGRRRSDSENVKAPEKGRTGSLPRREVTSWDRSAPRNDSFDKGTMYTPQVPKKLSHSEKNKCASMEEILSRRDSSAHRAVLRRGLEAQFASAEPEQLSRIQELVALKLEKTQELLTEVKGYGEGKRKAKDSNTSTSTTTSSSSSSSKSDSERILQESERLLGEASSTWSQAKRVLQEIRELRDLYKQFELQQSDSKPKQSSQAHYRKSMM
SIO_010081: PLEKHO1
subclass of: SO_0000673
so part of: PLEKHO1
location: complement(join(497175..497939,498409..498510,499259..499363,499878..500018,506560..506706,507512..507541))
location: region:497175-507541:-1
so has part: feature:507512-507541:-1:exon
so has part: feature:506560-506706:-1:exon
so has part: feature:499878-500018:-1:exon
so has part: feature:499259-499363:-1:exon
so has part: feature:498409-498510:-1:exon
so has part: feature:497175-497939:-1:exon

XP_027300264.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:507512-507541:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:506560-506706:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:499878-500018:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:499259-499363:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:498409-498510:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:497175-497939:-1:exon

LOC119713730
type: Gene
subclass of: SO_0000704
RO_0002162: 8839
gene: LOC119713730
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 508032..512815
location: region:508032-512815:1
so has part: feature:508032-512815:1:exon
subclass of: SO_0000011

119713730
type: Gene
SIO_000068: ncbigene

position:508032:1
position: 508032
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:512815:1
position: 512815
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:508032-512815:1:exon

LOC119713730
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 8839
nc RNA class: lncRNA
gene: LOC119713730
product: uncharacterized LOC119713730
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 14 samples with support for all annotated introns
transcript id: XR_005260985.1
SIO_010081: LOC119713730
subclass of: SO_0000673
so part of: LOC119713730
location: join(508032..508171,508284..512815)
location: region:508032-512815:1
so has part: feature:508032-508171:1:exon
so has part: feature:508284-512815:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:508032-508171:1:exon

position:508171:1
position: 508171
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:508284-512815:1:exon

position:508284:1
position: 508284
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

VPS45
type: Gene
subclass of: SO_0000704
RO_0002162: 8839
gene: VPS45
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(513139..533808)
location: region:513139-533808:-1
so has part: feature:513139-533808:-1:exon
subclass of: SO_0000010

101804056
type: Gene
SIO_000068: ncbigene

position:513139:-1
position: 513139
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:533808:-1
position: 533808
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:513139-533808:-1:exon

VPS45
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8839
gene: VPS45
product: vacuolar protein sorting 45 homolog, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 68 samples with support for all annotated introns
transcript id: XM_027444478.2
SIO_010081: VPS45
subclass of: SO_0000673
so part of: VPS45
location: complement(join(513139..513515,523921..524042,524359..524466,525107..525265,528202..528369,528885..528998,529333..529467,530152..530262,530679..530816,531090..531158,531551..531630,532673..532733,533058..533192,533646..533808))
location: region:513139-533808:-1
so has part: feature:533646-533808:-1:exon
so has part: feature:533058-533192:-1:exon
so has part: feature:532673-532733:-1:exon
so has part: feature:531551-531630:-1:exon
so has part: feature:531090-531158:-1:exon
so has part: feature:530679-530816:-1:exon
so has part: feature:530152-530262:-1:exon
so has part: feature:529333-529467:-1:exon
so has part: feature:528885-528998:-1:exon
so has part: feature:528202-528369:-1:exon
so has part: feature:525107-525265:-1:exon
so has part: feature:524359-524466:-1:exon
so has part: feature:523921-524042:-1:exon
so has part: feature:513139-513515:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:533646-533808:-1:exon

position:533646:-1
position: 533646
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:533058-533192:-1:exon

position:533058:-1
position: 533058
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:533192:-1
position: 533192
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:532673-532733:-1:exon

position:532673:-1
position: 532673
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:532733:-1
position: 532733
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:531551-531630:-1:exon

position:531551:-1
position: 531551
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:531630:-1
position: 531630
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:531090-531158:-1:exon

position:531090:-1
position: 531090
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:531158:-1
position: 531158
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:530679-530816:-1:exon

position:530679:-1
position: 530679
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:530816:-1
position: 530816
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:530152-530262:-1:exon

position:530152:-1
position: 530152
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:530262:-1
position: 530262
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:529333-529467:-1:exon

position:529333:-1
position: 529333
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:529467:-1
position: 529467
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:528885-528998:-1:exon

position:528885:-1
position: 528885
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:528998:-1
position: 528998
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:528202-528369:-1:exon

position:528202:-1
position: 528202
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:528369:-1
position: 528369
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:525107-525265:-1:exon

position:525107:-1
position: 525107
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:525265:-1
position: 525265
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:524359-524466:-1:exon

position:524359:-1
position: 524359
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:524466:-1
position: 524466
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:523921-524042:-1:exon

position:523921:-1
position: 523921
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:524042:-1
position: 524042
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:513139-513515:-1:exon

position:513515:-1
position: 513515
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

VPS45
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8839
gene: VPS45
product: vacuolar protein sorting 45 homolog, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 10 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 126 samples with support for all annotated introns
transcript id: XM_027444477.2
SIO_010081: VPS45
subclass of: SO_0000673
so part of: VPS45
location: complement(join(513139..513515,519210..519341,523921..524042,524359..524466,525107..525265,528202..528369,528885..528998,529333..529467,530152..530262,530679..530816,531090..531158,531551..531630,532673..532733,533058..533192,533646..533808))
location: region:513139-533808:-1
so has part: feature:533646-533808:-1:exon
so has part: feature:533058-533192:-1:exon
so has part: feature:532673-532733:-1:exon
so has part: feature:531551-531630:-1:exon
so has part: feature:531090-531158:-1:exon
so has part: feature:530679-530816:-1:exon
so has part: feature:530152-530262:-1:exon
so has part: feature:529333-529467:-1:exon
so has part: feature:528885-528998:-1:exon
so has part: feature:528202-528369:-1:exon
so has part: feature:525107-525265:-1:exon
so has part: feature:524359-524466:-1:exon
so has part: feature:523921-524042:-1:exon
so has part: feature:519210-519341:-1:exon
so has part: feature:513139-513515:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:533646-533808:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:533058-533192:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:532673-532733:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:531551-531630:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:531090-531158:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:530679-530816:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:530152-530262:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:529333-529467:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:528885-528998:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:528202-528369:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:525107-525265:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:524359-524466:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:523921-524042:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:519210-519341:-1:exon

position:519210:-1
position: 519210
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:519341:-1
position: 519341
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:513139-513515:-1:exon

VPS45
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8839
gene: VPS45
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: vacuolar protein sorting-associated protein 45 isoform X2
translation: MNAVLAVKQYVAKMIEDSGPGMKVLLMDRETTGVVSMVYTQSEILQKEVYLFERIDSFNREPMKHLKAICFLRPTKENVEYLIQELRRPKYSIYFIYFSNVISKSDIKSLAEADEQEVVAEVQEFYGDYIAVNPHVFSLNLLGCCQGRNWDPAQLARTTQGLTALLLSLKKCPMIRYQLSSEPAKRLAECVKQVITKEYELFDFRRTEVPPLLLILDRSDDAITPLLNQWTYQAMVHELLGINNNRIDLSRVPGISKDLREVVLSAENDEFYANNMYLNFAEIGSNIKNLMEDFQKRKPKEQQKLESIADMKAFVENYPQFKKMSGTVSKHVTVVGELSRLVAERNLLEVSEVEQELACQNDHSSALQNVRRLLQNPKVTELDAARLVMLYALHYERHSSNSLPGLLTDLRNRGVSDRYRKLVSAVVEYGGKRVRGSDLFSPKDAVAITKQFLKGLKGVENVYTQHQPLLQETLDQLIKGKLKDSQFPYLGPNTLRDSFLEEVTAAGFRGRSTESSQAPPRPSSRR
SIO_010081: VPS45
subclass of: SO_0000673
so part of: VPS45
location: complement(join(513428..513515,523921..524042,524359..524466,525107..525265,528202..528369,528885..528998,529333..529467,530152..530262,530679..530816,531090..531158,531551..531630,532673..532733,533058..533192,533646..533738))
location: region:513428-533738:-1
so has part: feature:533646-533738:-1:exon
so has part: feature:533058-533192:-1:exon
so has part: feature:532673-532733:-1:exon
so has part: feature:531551-531630:-1:exon
so has part: feature:531090-531158:-1:exon
so has part: feature:530679-530816:-1:exon
so has part: feature:530152-530262:-1:exon
so has part: feature:529333-529467:-1:exon
so has part: feature:528885-528998:-1:exon
so has part: feature:528202-528369:-1:exon
so has part: feature:525107-525265:-1:exon
so has part: feature:524359-524466:-1:exon
so has part: feature:523921-524042:-1:exon
so has part: feature:513428-513515:-1:exon

XP_027300279.1
type: Protein
SIO_000068: ncbiprotein

position:513428:-1
position: 513428
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:533738:-1
position: 533738
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:533646-533738:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:533058-533192:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:532673-532733:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:531551-531630:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:531090-531158:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:530679-530816:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:530152-530262:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:529333-529467:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:528885-528998:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:528202-528369:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:525107-525265:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:524359-524466:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:523921-524042:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:513428-513515:-1:exon

VPS45
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8839
gene: VPS45
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: vacuolar protein sorting-associated protein 45 isoform X1
translation: MNAVLAVKQYVAKMIEDSGPGMKVLLMDRETTGVVSMVYTQSEILQKEVYLFERIDSFNREPMKHLKAICFLRPTKENVEYLIQELRRPKYSIYFIYFSNVISKSDIKSLAEADEQEVVAEVQEFYGDYIAVNPHVFSLNLLGCCQGRNWDPAQLARTTQGLTALLLSLKKCPMIRYQLSSEPAKRLAECVKQVITKEYELFDFRRTEVPPLLLILDRSDDAITPLLNQWTYQAMVHELLGINNNRIDLSRVPGISKDLREVVLSAENDEFYANNMYLNFAEIGSNIKNLMEDFQKRKPKEQQKLESIADMKAFVENYPQFKKMSGTVSKHVTVVGELSRLVAERNLLEVSEVEQELACQNDHSSALQNVRRLLQNPKVTELDAARLVMLYALHYERHSSNSLPGLLTDLRNRGVSDRYRKLVSAVVEYGGKRVRGSDLFSPKDAVAITKQFLKGLKGVENVYTQHQPLLQETLDQLIKGKLKDSQFPYLGPNTLRDRPQDIIVFIIGGATYEEALAVYNLNRTNPGVRIVLGGTTIHNTKSFLEEVTAAGFRGRSTESSQAPPRPSSRR
SIO_010081: VPS45
subclass of: SO_0000673
so part of: VPS45
location: complement(join(513428..513515,519210..519341,523921..524042,524359..524466,525107..525265,528202..528369,528885..528998,529333..529467,530152..530262,530679..530816,531090..531158,531551..531630,532673..532733,533058..533192,533646..533738))
location: region:513428-533738:-1
so has part: feature:533646-533738:-1:exon
so has part: feature:533058-533192:-1:exon
so has part: feature:532673-532733:-1:exon
so has part: feature:531551-531630:-1:exon
so has part: feature:531090-531158:-1:exon
so has part: feature:530679-530816:-1:exon
so has part: feature:530152-530262:-1:exon
so has part: feature:529333-529467:-1:exon
so has part: feature:528885-528998:-1:exon
so has part: feature:528202-528369:-1:exon
so has part: feature:525107-525265:-1:exon
so has part: feature:524359-524466:-1:exon
so has part: feature:523921-524042:-1:exon
so has part: feature:519210-519341:-1:exon
so has part: feature:513428-513515:-1:exon

XP_027300278.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:533646-533738:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:533058-533192:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:532673-532733:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:531551-531630:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:531090-531158:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:530679-530816:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:530152-530262:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:529333-529467:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:528885-528998:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:528202-528369:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:525107-525265:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:524359-524466:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:523921-524042:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:519210-519341:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:513428-513515:-1:exon

LOC119713729
type: Gene
subclass of: SO_0000704
RO_0002162: 8839
gene: LOC119713729
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(520881..523914)
location: region:520881-523914:-1
so has part: feature:520881-523914:-1:exon
subclass of: SO_0000011

119713729
type: Gene
SIO_000068: ncbigene

position:520881:-1
position: 520881
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:523914:-1
position: 523914
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:520881-523914:-1:exon

LOC119713729
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 8839
nc RNA class: lncRNA
gene: LOC119713729
product: uncharacterized LOC119713729
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 11 samples with support for all annotated introns
transcript id: XR_005260984.1
SIO_010081: LOC119713729
subclass of: SO_0000673
so part of: LOC119713729
location: complement(join(520881..521835,521943..523914))
location: region:520881-523914:-1
so has part: feature:521943-523914:-1:exon
so has part: feature:520881-521835:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:521943-523914:-1:exon

position:521943:-1
position: 521943
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:520881-521835:-1:exon

position:521835:-1
position: 521835
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

OTUD7B
type: Gene
subclass of: SO_0000704
RO_0002162: 8839
gene: OTUD7B
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 546910..576795
location: region:546910-576795:1
so has part: feature:546910-576795:1:exon
subclass of: SO_0000010

101792857
type: Gene
SIO_000068: ncbigene

position:546910:1
position: 546910
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:576795:1
position: 576795
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:546910-576795:1:exon

OTUD7B
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8839
gene: OTUD7B
product: OTU deubiquitinase 7B
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 8 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 120 samples with support for all annotated introns
transcript id: XM_027444479.2
SIO_010081: OTUD7B
subclass of: SO_0000673
so part of: OTUD7B
location: join(546910..547064,558756..558904,562118..562288,562499..562714,567709..567810,568441..568568,571088..571200,571950..572077,572680..572829,573201..573315,574346..574430,575227..576795)
location: region:546910-576795:1
so has part: feature:546910-547064:1:exon
so has part: feature:558756-558904:1:exon
so has part: feature:562118-562288:1:exon
so has part: feature:562499-562714:1:exon
so has part: feature:567709-567810:1:exon
so has part: feature:568441-568568:1:exon
so has part: feature:571088-571200:1:exon
so has part: feature:571950-572077:1:exon
so has part: feature:572680-572829:1:exon
so has part: feature:573201-573315:1:exon
so has part: feature:574346-574430:1:exon
so has part: feature:575227-576795:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:546910-547064:1:exon

position:547064:1
position: 547064
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:558756-558904:1:exon

position:558756:1
position: 558756
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:558904:1
position: 558904
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:562118-562288:1:exon

position:562118:1
position: 562118
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:562288:1
position: 562288
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:562499-562714:1:exon

position:562499:1
position: 562499
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:562714:1
position: 562714
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:567709-567810:1:exon

position:567709:1
position: 567709
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:567810:1
position: 567810
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:568441-568568:1:exon

position:568441:1
position: 568441
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:568568:1
position: 568568
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:571088-571200:1:exon

position:571088:1
position: 571088
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:571200:1
position: 571200
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:571950-572077:1:exon

position:571950:1
position: 571950
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:572077:1
position: 572077
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:572680-572829:1:exon

position:572680:1
position: 572680
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:572829:1
position: 572829
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:573201-573315:1:exon

position:573201:1
position: 573201
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:573315:1
position: 573315
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:574346-574430:1:exon

position:574346:1
position: 574346
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:574430:1
position: 574430
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:575227-576795:1:exon

position:575227:1
position: 575227
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

OTUD7B
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8839
gene: OTUD7B
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: OTU domain-containing protein 7B
translation: MDIVLSDFVRSTGAEPGLARDLLEGKNWDLSAALSDFEQLRQVHAGNLPPSFNEGRSYKPPEKEAARAGRPPLQRQDDIVQEKRLSRGISHASSTIVSLARSHVSSNGSSEHLLEMPISTFQLPDLTVYTEEFRSFIERDLIEQSMLVALEQAGRLNWWANVDPSCQRLLPLATTGDGNCLLHAASLGMWGFHDRDLMLRKSLYTLMDKGVEREALKRRWRWQQTQQNKESGLVYTEEEWQKEWNELIKLASSEPRVHYGTNGGNCGGVESSEEPVYESLEEFHVFVLAHVLKRPIVVVADTMLRDSGGEAFAPIPFGGIYLPLEVPANKCHRSPLVLAYDQAHFSALVSMEQKEPTKDQAVIPLTDSEHKLLPVHFAVDPGKDWQWGKDDSDNVKLASVTLSLEAKLHLLHSYMNVKWITLPCDTQAPLAQPESPTASAGDDARSAAESGESDKESVCSSSASNGGSRGCKDKEKPKKDREKDKEKDKKRADSVANKLGSFGKTLGSKLKKNMGGLMHSKSMKGGVSNGQGDTLEKKKKGSLKSRKGSKEESSQGDLSAPVEKTCPGKAAPEKPSDPYKYSNDVRLSLSILRAAMQGERKFIFAGHLKTSNRLQYQEEMIQQYLLDAEERFLAEQKQKEAEKKALASAAPAKRLEPELNAHKGEEAMLSPAYPQPPPAYAIQTPDLALGAKMAAFPSSYSGVFTFPRPSVASSTEGSHPPGFPDGRRQVAGGPCSSLPPYATLPRHCGQPRPSPHSSSPSHAGRFSPTDTDSQPGFPAAEREGPGGSAPHSNGCREHAEQDGSQKGADKSRGRALYNVQQTKCKQPNCSFYGHPETGNFCSCCYREELKRKEREALVHRF
SIO_010081: OTUD7B
subclass of: SO_0000673
so part of: OTUD7B
location: join(558832..558904,562118..562288,562499..562714,567709..567810,568441..568568,571088..571200,571950..572077,572680..572829,573201..573315,574346..574430,575227..576531)
location: region:558832-576531:1
so has part: feature:558832-558904:1:exon
so has part: feature:562118-562288:1:exon
so has part: feature:562499-562714:1:exon
so has part: feature:567709-567810:1:exon
so has part: feature:568441-568568:1:exon
so has part: feature:571088-571200:1:exon
so has part: feature:571950-572077:1:exon
so has part: feature:572680-572829:1:exon
so has part: feature:573201-573315:1:exon
so has part: feature:574346-574430:1:exon
so has part: feature:575227-576531:1:exon

XP_027300280.1
type: Protein
SIO_000068: ncbiprotein

position:558832:1
position: 558832
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:576531:1
position: 576531
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:558832-558904:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:562118-562288:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:562499-562714:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:567709-567810:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:568441-568568:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:571088-571200:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:571950-572077:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:572680-572829:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:573201-573315:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:574346-574430:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:575227-576531:1:exon

MTMR11
type: Gene
subclass of: SO_0000704
RO_0002162: 8839
gene: MTMR11
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 582558..588769
location: region:582558-588769:1
so has part: feature:582558-588769:1:exon
subclass of: SO_0000010

113839869
type: Gene
SIO_000068: ncbigene

position:582558:1
position: 582558
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:588769:1
position: 588769
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:582558-588769:1:exon

MTMR11
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8839
gene: MTMR11
product: myotubularin related protein 11, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 104 samples with support for all annotated introns
transcript id: XM_038167942.1
SIO_010081: MTMR11
subclass of: SO_0000673
so part of: MTMR11
location: join(582558..582798,583069..583199,583861..583933,584033..584175,584262..584524,584618..584705,584807..584895,585018..585139,585268..585331,585586..585656,585751..585923,586010..586180,586390..586578,586764..587035,587912..588769)
location: region:582558-588769:1
so has part: feature:582558-582798:1:exon
so has part: feature:583069-583199:1:exon
so has part: feature:583861-583933:1:exon
so has part: feature:584033-584175:1:exon
so has part: feature:584262-584524:1:exon
so has part: feature:584618-584705:1:exon
so has part: feature:584807-584895:1:exon
so has part: feature:585018-585139:1:exon
so has part: feature:585268-585331:1:exon
so has part: feature:585586-585656:1:exon
so has part: feature:585751-585923:1:exon
so has part: feature:586010-586180:1:exon
so has part: feature:586390-586578:1:exon
so has part: feature:586764-587035:1:exon
so has part: feature:587912-588769:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:582558-582798:1:exon

position:582798:1
position: 582798
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:583069-583199:1:exon

position:583069:1
position: 583069
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:583199:1
position: 583199
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:583861-583933:1:exon

position:583861:1
position: 583861
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:583933:1
position: 583933
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:584033-584175:1:exon

position:584033:1
position: 584033
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:584175:1
position: 584175
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:584262-584524:1:exon

position:584262:1
position: 584262
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:584524:1
position: 584524
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:584618-584705:1:exon

position:584618:1
position: 584618
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:584705:1
position: 584705
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:584807-584895:1:exon

position:584807:1
position: 584807
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:584895:1
position: 584895
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:585018-585139:1:exon

position:585018:1
position: 585018
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:585139:1
position: 585139
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:585268-585331:1:exon

position:585268:1
position: 585268
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:585331:1
position: 585331
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:585586-585656:1:exon

position:585586:1
position: 585586
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:585656:1
position: 585656
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:585751-585923:1:exon

position:585751:1
position: 585751
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:585923:1
position: 585923
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:586010-586180:1:exon

position:586010:1
position: 586010
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:586180:1
position: 586180
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:586390-586578:1:exon

position:586390:1
position: 586390
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:586578:1
position: 586578
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:586764-587035:1:exon

position:586764:1
position: 586764
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:587035:1
position: 587035
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:587912-588769:1:exon

position:587912:1
position: 587912
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

MTMR11
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8839
gene: MTMR11
product: myotubularin related protein 11, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 43 samples with support for all annotated introns
transcript id: XM_038167943.1
SIO_010081: MTMR11
subclass of: SO_0000673
so part of: MTMR11
location: join(582558..582798,583069..583199,583861..583933,584033..584175,584262..584524,584618..584705,584807..584895,585018..585139,585268..585331,585586..585656,585751..585923,586010..586180,586764..587035,587912..588769)
location: region:582558-588769:1
so has part: feature:582558-582798:1:exon
so has part: feature:583069-583199:1:exon
so has part: feature:583861-583933:1:exon
so has part: feature:584033-584175:1:exon
so has part: feature:584262-584524:1:exon
so has part: feature:584618-584705:1:exon
so has part: feature:584807-584895:1:exon
so has part: feature:585018-585139:1:exon
so has part: feature:585268-585331:1:exon
so has part: feature:585586-585656:1:exon
so has part: feature:585751-585923:1:exon
so has part: feature:586010-586180:1:exon
so has part: feature:586764-587035:1:exon
so has part: feature:587912-588769:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:582558-582798:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:583069-583199:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:583861-583933:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:584033-584175:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:584262-584524:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:584618-584705:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:584807-584895:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:585018-585139:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:585268-585331:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:585586-585656:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:585751-585923:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:586010-586180:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:586764-587035:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:587912-588769:1:exon

MTMR11
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8839
gene: MTMR11
product: myotubularin related protein 11, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 104 samples with support for all annotated introns
transcript id: XM_027444504.2
SIO_010081: MTMR11
subclass of: SO_0000673
so part of: MTMR11
location: join(582559..582798,583069..583199,583861..583933,584033..584175,584262..584524,584618..584705,584807..584895,585018..585139,585268..585331,585586..585656,585751..585923,586010..586180,586387..586578,586764..587035,587912..588769)
location: region:582559-588769:1
so has part: feature:582559-582798:1:exon
so has part: feature:583069-583199:1:exon
so has part: feature:583861-583933:1:exon
so has part: feature:584033-584175:1:exon
so has part: feature:584262-584524:1:exon
so has part: feature:584618-584705:1:exon
so has part: feature:584807-584895:1:exon
so has part: feature:585018-585139:1:exon
so has part: feature:585268-585331:1:exon
so has part: feature:585586-585656:1:exon
so has part: feature:585751-585923:1:exon
so has part: feature:586010-586180:1:exon
so has part: feature:586387-586578:1:exon
so has part: feature:586764-587035:1:exon
so has part: feature:587912-588769:1:exon

position:582559:1
position: 582559
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:582559-582798:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:583069-583199:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:583861-583933:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:584033-584175:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:584262-584524:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:584618-584705:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:584807-584895:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:585018-585139:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:585268-585331:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:585586-585656:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:585751-585923:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:586010-586180:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:586387-586578:1:exon

position:586387:1
position: 586387
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:586764-587035:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:587912-588769:1:exon

MTMR11
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8839
gene: MTMR11
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: myotubularin-related protein 11 isoform X1
translation: MPGGPRAAETGRLLPPRVPRSPSRPFPVPPGRAKSSAMNGERGGSRSAFPGLPGEVVLEEAAGVRLRCREGDGSVPGTLVCTNLRVAFLAAPGHGVQPPGSVAPLQSEHNVALPCIRKLVAGSSFTKAKVLTAASTLKFIPEELLIFCRDFRLLRFHFHENGLAPQAYRLANAIAKARETATWPWDSGDSSSWAETKPEEEEEDEEEEEEEEGDDEEGSAPTLLFESLPDWEKELKRQGAAGWRVSAINERFDMAPSLPRYLWVPSGLLDHDLKRTFAHFEERRVPRLCWHHPGGSDLLRSAGFHAASEPGSEDVRCLEALLRAGHGPCVLADTAELPTLADIQLAHLKLWALCLHGAAPEEKWLSALEATRWLDHVRACLRKAVEVASLLAGRRCCVLLQEPSDRDLNCLLASLVQLLADPHARTLPGFQSLVQREWVAAGHPFPRRLGLRRGNPREEAPVFPLFLDCTWQLVRQFPAAFGFTEAFLLALHDGAFQPYCGTFLFTCQRQRGRGGPQQPRGQTYTPVNGCWDPPAGSRLPPVWDWALRYSPQQRARFRNPAGGGGTLSPQNTGDPETTATPPDSWPGGGAGRCWRWPRARCAPSPSRGAAAAPPPGCCAGPPPWRASANGGGALGAAPSPSPPGGCSCPAPRDPRCGSGVAATCGACPKVSTAASPPPRPGWRRS
SIO_010081: MTMR11
subclass of: SO_0000673
so part of: MTMR11
location: join(582639..582798,583069..583199,583861..583933,584033..584175,584262..584524,584618..584705,584807..584895,585018..585139,585268..585331,585586..585656,585751..585923,586010..586180,586387..586578,586764..587035,587912..587957)
location: region:582639-587957:1
so has part: feature:582639-582798:1:exon
so has part: feature:583069-583199:1:exon
so has part: feature:583861-583933:1:exon
so has part: feature:584033-584175:1:exon
so has part: feature:584262-584524:1:exon
so has part: feature:584618-584705:1:exon
so has part: feature:584807-584895:1:exon
so has part: feature:585018-585139:1:exon
so has part: feature:585268-585331:1:exon
so has part: feature:585586-585656:1:exon
so has part: feature:585751-585923:1:exon
so has part: feature:586010-586180:1:exon
so has part: feature:586387-586578:1:exon
so has part: feature:586764-587035:1:exon
so has part: feature:587912-587957:1:exon

XP_027300305.2
type: Protein
SIO_000068: ncbiprotein

position:582639:1
position: 582639
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:587957:1
position: 587957
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:582639-582798:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:583069-583199:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:583861-583933:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:584033-584175:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:584262-584524:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:584618-584705:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:584807-584895:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:585018-585139:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:585268-585331:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:585586-585656:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:585751-585923:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:586010-586180:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:586387-586578:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:586764-587035:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:587912-587957:1:exon

MTMR11
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8839
gene: MTMR11
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: myotubularin-related protein 11 isoform X2
translation: MPGGPRAAETGRLLPPRVPRSPSRPFPVPPGRAKSSAMNGERGGSRSAFPGLPGEVVLEEAAGVRLRCREGDGSVPGTLVCTNLRVAFLAAPGHGVQPPGSVAPLQSEHNVALPCIRKLVAGSSFTKAKVLTAASTLKFIPEELLIFCRDFRLLRFHFHENGLAPQAYRLANAIAKARETATWPWDSGDSSSWAETKPEEEEEDEEEEEEEEGDDEEGSAPTLLFESLPDWEKELKRQGAAGWRVSAINERFDMAPSLPRYLWVPSGLLDHDLKRTFAHFEERRVPRLCWHHPGGSDLLRSAGFHAASEPGSEDVRCLEALLRAGHGPCVLADTAELPTLADIQLAHLKLWALCLHGAAPEEKWLSALEATRWLDHVRACLRKAVEVASLLAGRRCCVLLQEPSDRDLNCLLASLVQLLADPHARTLPGFQSLVQREWVAAGHPFPRRLGLRRGNPREEAPVFPLFLDCTWQLVRQFPAAFGFTEAFLLALHDGAFQPYCGTFLFTCQRQRGRGGPQPRGQTYTPVNGCWDPPAGSRLPPVWDWALRYSPQQRARFRNPAGGGGTLSPQNTGDPETTATPPDSWPGGGAGRCWRWPRARCAPSPSRGAAAAPPPGCCAGPPPWRASANGGGALGAAPSPSPPGGCSCPAPRDPRCGSGVAATCGACPKVSTAASPPPRPGWRRS
SIO_010081: MTMR11
subclass of: SO_0000673
so part of: MTMR11
location: join(582639..582798,583069..583199,583861..583933,584033..584175,584262..584524,584618..584705,584807..584895,585018..585139,585268..585331,585586..585656,585751..585923,586010..586180,586390..586578,586764..587035,587912..587957)
location: region:582639-587957:1
so has part: feature:582639-582798:1:exon
so has part: feature:583069-583199:1:exon
so has part: feature:583861-583933:1:exon
so has part: feature:584033-584175:1:exon
so has part: feature:584262-584524:1:exon
so has part: feature:584618-584705:1:exon
so has part: feature:584807-584895:1:exon
so has part: feature:585018-585139:1:exon
so has part: feature:585268-585331:1:exon
so has part: feature:585586-585656:1:exon
so has part: feature:585751-585923:1:exon
so has part: feature:586010-586180:1:exon
so has part: feature:586390-586578:1:exon
so has part: feature:586764-587035:1:exon
so has part: feature:587912-587957:1:exon

XP_038023870.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:582639-582798:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:583069-583199:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:583861-583933:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:584033-584175:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:584262-584524:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:584618-584705:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:584807-584895:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:585018-585139:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:585268-585331:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:585586-585656:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:585751-585923:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:586010-586180:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:586390-586578:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:586764-587035:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:587912-587957:1:exon

MTMR11
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8839
gene: MTMR11
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: myotubularin-related protein 11 isoform X3
translation: MPGGPRAAETGRLLPPRVPRSPSRPFPVPPGRAKSSAMNGERGGSRSAFPGLPGEVVLEEAAGVRLRCREGDGSVPGTLVCTNLRVAFLAAPGHGVQPPGSVAPLQSEHNVALPCIRKLVAGSSFTKAKVLTAASTLKFIPEELLIFCRDFRLLRFHFHENGLAPQAYRLANAIAKARETATWPWDSGDSSSWAETKPEEEEEDEEEEEEEEGDDEEGSAPTLLFESLPDWEKELKRQGAAGWRVSAINERFDMAPSLPRYLWVPSGLLDHDLKRTFAHFEERRVPRLCWHHPGGSDLLRSAGFHAASEPGSEDVRCLEALLRAGHGPCVLADTAELPTLADIQLAHLKLWALCLHGAAPEEKWLSALEATRWLDHVRACLRKAVEVASLLAGRRCCVLLQEPSDRDLNCLLASLVQLLADPHARTLPGFQSLVQREWVAAGHPFPRRLGLRRGNPREEAPVFPLFLDCTWQLVRQFPAAFGFTEAFLLALHDGAFQPYCGTFLFTCQRQRGRGGPPPDSWPGGGAGRCWRWPRARCAPSPSRGAAAAPPPGCCAGPPPWRASANGGGALGAAPSPSPPGGCSCPAPRDPRCGSGVAATCGACPKVSTAASPPPRPGWRRS
SIO_010081: MTMR11
subclass of: SO_0000673
so part of: MTMR11
location: join(582639..582798,583069..583199,583861..583933,584033..584175,584262..584524,584618..584705,584807..584895,585018..585139,585268..585331,585586..585656,585751..585923,586010..586180,586764..587035,587912..587957)
location: region:582639-587957:1
so has part: feature:582639-582798:1:exon
so has part: feature:583069-583199:1:exon
so has part: feature:583861-583933:1:exon
so has part: feature:584033-584175:1:exon
so has part: feature:584262-584524:1:exon
so has part: feature:584618-584705:1:exon
so has part: feature:584807-584895:1:exon
so has part: feature:585018-585139:1:exon
so has part: feature:585268-585331:1:exon
so has part: feature:585586-585656:1:exon
so has part: feature:585751-585923:1:exon
so has part: feature:586010-586180:1:exon
so has part: feature:586764-587035:1:exon
so has part: feature:587912-587957:1:exon

XP_038023871.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:582639-582798:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:583069-583199:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:583861-583933:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:584033-584175:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:584262-584524:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:584618-584705:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:584807-584895:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:585018-585139:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:585268-585331:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:585586-585656:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:585751-585923:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:586010-586180:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:586764-587035:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:587912-587957:1:exon

SF3B4
type: Gene
subclass of: SO_0000704
RO_0002162: 8839
gene: SF3B4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 589313..594013
location: region:589313-594013:1
so has part: feature:589313-594013:1:exon
subclass of: SO_0000010

119713825
type: Gene
SIO_000068: ncbigene

position:589313:1
position: 589313
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:594013:1
position: 594013
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:589313-594013:1:exon

SF3B4
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8839
gene: SF3B4
product: splicing factor 3b subunit 4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 116 samples with support for all annotated introns
transcript id: XM_038167944.1
SIO_010081: SF3B4
subclass of: SO_0000673
so part of: SF3B4
location: join(589313..589472,589674..589802,590544..591086,591462..591656,592863..593033,593690..594013)
location: region:589313-594013:1
so has part: feature:589313-589472:1:exon
so has part: feature:589674-589802:1:exon
so has part: feature:590544-591086:1:exon
so has part: feature:591462-591656:1:exon
so has part: feature:592863-593033:1:exon
so has part: feature:593690-594013:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:589313-589472:1:exon

position:589472:1
position: 589472
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:589674-589802:1:exon

position:589674:1
position: 589674
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:589802:1
position: 589802
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:590544-591086:1:exon

position:590544:1
position: 590544
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:591086:1
position: 591086
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:591462-591656:1:exon

position:591462:1
position: 591462
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:591656:1
position: 591656
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:592863-593033:1:exon

position:592863:1
position: 592863
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:593033:1
position: 593033
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:593690-594013:1:exon

position:593690:1
position: 593690
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

SF3B4
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8839
gene: SF3B4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: splicing factor 3B subunit 4
translation: MAAGPISERNQDATVYVGGLDEKVSEPLLWELFLQAGPVVNTHMPKDRVTGQHQGYGFVEFLSEEDADYAIKIMNMIKLYGKPIRVNKASAHNKNLDVGANIFIGNLDPEIDEKLLYDTFSAFGVILQTPKIMRDPDTGNSKGYAFINFASFDASDAAIEAMNGQYLCNRPITVSYAFKKDSKGERHGSAAERLLAAQNPLSQADRPHQLFADAPPPPSVPTPVVTSLGPGVTPPGLPPPGSFPPPVPPPGALPPGMPPAMPPPPMPPGAGAPGPPSGAAPSGGHPPHPHPFPPGGMHHPGMPPMQVHHGPPGMGQHHPGPPGSGGQPPPRPPPGMPHPGPPPMGMPPRGPHFGSPMGHPGPMPHHGMRGPPPLMPPHGYNGPPRPPPYGYQRVPLPPRPAQRPPGVPPRGPLRGPLP
SIO_010081: SF3B4
subclass of: SO_0000673
so part of: SF3B4
location: join(589439..589472,589674..589802,590544..591086,591462..591656,592863..593033,593690..593874)
location: region:589439-593874:1
so has part: feature:589439-589472:1:exon
so has part: feature:589674-589802:1:exon
so has part: feature:590544-591086:1:exon
so has part: feature:591462-591656:1:exon
so has part: feature:592863-593033:1:exon
so has part: feature:593690-593874:1:exon

XP_038023872.1
type: Protein
SIO_000068: ncbiprotein

position:589439:1
position: 589439
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:593874:1
position: 593874
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:589439-589472:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:589674-589802:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:590544-591086:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:591462-591656:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:592863-593033:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:593690-593874:1:exon

LOC119713892
type: Gene
subclass of: SO_0000704
RO_0002162: 8839
gene: LOC119713892
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(604452..606819)
location: region:604452-606819:-1
so has part: feature:604452-606819:-1:exon
subclass of: SO_0000010

119713892
type: Gene
SIO_000068: ncbigene

position:604452:-1
position: 604452
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:606819:-1
position: 606819
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:604452-606819:-1:exon

LOC119713892
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8839
gene: LOC119713892
product: nuclear receptor subfamily 2 group F member 5-like
exception: unclassified transcription discrepancy
note: The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: inserted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 15 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 81 samples with support for all annotated introns
transcript id: XM_038168141.1
SIO_010081: LOC119713892
subclass of: SO_0000673
so part of: LOC119713892
location: complement(join(604452..604740,606258..606819))
location: region:604452-606819:-1
so has part: feature:606258-606819:-1:exon
so has part: feature:604452-604740:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:606258-606819:-1:exon

position:606258:-1
position: 606258
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:604452-604740:-1:exon

position:604740:-1
position: 604740
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC119713892
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8839
gene: LOC119713892
exception: unclassified translation discrepancy
note: The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: inserted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: LOW QUALITY PROTEIN: nuclear receptor subfamily 2 group F member 5-like
translation: MAHSQSSPGQYPLAPGDPYGGHGYLSGFISLLLRAEPYPPARYGAQCLQPSSVVGIESICELAARLLFSAIEWAKAIPFFPDLQLSDQVALLRLGWSELFVLNAAQSALPLHAAPLLAAAGLHAAPMAAERVVAFMDHIRVFQEQVEKLKALHVDAAEYACLKAVALFSPDAVGLSDLGHVESVQEKSQCALEEYVRSQHPSQPGRFGRLLLRLPSLRSVSAPVIEQLFFVRLVGKTPIETLIRDMLLXGSTFSWPYIPMQ
SIO_010081: LOC119713892
subclass of: SO_0000673
so part of: LOC119713892
location: complement(join(604467..604740,606258..606768))
location: region:604467-606768:-1
so has part: feature:606258-606768:-1:exon
so has part: feature:604467-604740:-1:exon

XP_038024069.1
type: Protein
SIO_000068: ncbiprotein

position:604467:-1
position: 604467
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:606768:-1
position: 606768
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:606258-606768:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:604467-604740:-1:exon

SV2A
type: Gene
subclass of: SO_0000704
RO_0002162: 8839
gene: SV2A
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(612661..619919)
location: region:612661-619919:-1
so has part: feature:612661-619919:-1:exon
subclass of: SO_0000010

101793736
type: Gene
SIO_000068: ncbigene

position:612661:-1
position: 612661
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:619919:-1
position: 619919
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:612661-619919:-1:exon

SV2A
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8839
gene: SV2A
product: synaptic vesicle glycoprotein 2A
exception: unclassified transcription discrepancy
note: The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: inserted 3 bases in 2 codons; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 98% coverage of the annotated genomic feature by RNAseq alignments, including 14 samples with support for all annotated introns
transcript id: XM_038168143.1
SIO_010081: SV2A
subclass of: SO_0000673
so part of: SV2A
location: complement(join(612661..612929,614117..614276,614917..615120,615208..615341,615432..615596,616329..616417,616511..616620,616814..616903,617037..617170,617260..617411,617524..617704,618980..619919))
location: region:612661-619919:-1
so has part: feature:618980-619919:-1:exon
so has part: feature:617524-617704:-1:exon
so has part: feature:617260-617411:-1:exon
so has part: feature:617037-617170:-1:exon
so has part: feature:616814-616903:-1:exon
so has part: feature:616511-616620:-1:exon
so has part: feature:616329-616417:-1:exon
so has part: feature:615432-615596:-1:exon
so has part: feature:615208-615341:-1:exon
so has part: feature:614917-615120:-1:exon
so has part: feature:614117-614276:-1:exon
so has part: feature:612661-612929:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:618980-619919:-1:exon

position:618980:-1
position: 618980
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:617524-617704:-1:exon

position:617524:-1
position: 617524
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:617704:-1
position: 617704
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:617260-617411:-1:exon

position:617260:-1
position: 617260
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:617411:-1
position: 617411
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:617037-617170:-1:exon

position:617037:-1
position: 617037
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:617170:-1
position: 617170
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:616814-616903:-1:exon

position:616814:-1
position: 616814
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:616903:-1
position: 616903
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:616511-616620:-1:exon

position:616511:-1
position: 616511
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:616620:-1
position: 616620
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:616329-616417:-1:exon

position:616329:-1
position: 616329
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:616417:-1
position: 616417
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:615432-615596:-1:exon

position:615432:-1
position: 615432
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:615596:-1
position: 615596
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:615208-615341:-1:exon

position:615208:-1
position: 615208
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:615341:-1
position: 615341
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:614917-615120:-1:exon

position:614917:-1
position: 614917
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:615120:-1
position: 615120
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:614117-614276:-1:exon

position:614117:-1
position: 614117
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:614276:-1
position: 614276
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:612661-612929:-1:exon

position:612929:-1
position: 612929
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

SV2A
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8839
gene: SV2A
exception: unclassified translation discrepancy
note: The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: inserted 3 bases in 2 codons; Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: LOW QUALITY PROTEIN: synaptic vesicle glycoprotein 2A
translation: MDESFRDRTAFIRGAKDIAKEVKKHAAKKVSKGMDRMQDEYTKRSYTRFEEEEDDEDYPPQDGYYRGGEGANEEEGASSDATXGHDEEDEIYEGEYQGIPRHDSMKGGERLGAEAAAGAFDDTEGQRRKDKEELAQQYELILQECGHGRFQWTLYFVLGLALMADGVEVFVVGFVLPSAEKDMCLSDSNKGMLGLIVYLGMMVGAFLWGGLADRLGRRQCLLISLSVNSVFAFFSSFVQGYGTFLFCRLLSGVGIGGSIPIVFSYFSEFLAQEKRGEHLSWLCMFWMIGGIYASAMAWAIIPHYGWSFQMGSAYQFHSWRVFVLVCAFPSVFAIGALTTMPESPRFFLENGKHDEAWMVLKQVHDTNMRAKGHPERVFSVTHIKTIKREXELIEIQSDTGTWYRRWLVRFLNLSQQVWSNFQQCFAPEYRRITLMMMAVWFTMSFSYYGLTVWFPDMIKHLQNIEYASRTKLFTREKVRHFTFNFTLENQIHQGGEYFNDKFIGLKMKSVTFEDSLFEECYFEDITSSNTFFKNCTFISTVFYNTDLFEYKFINSRVLNSTFLHNKEGCQLDFSDDNNAYMIYFVSFLGTLAVLPGNIVSALLMDKIGRLRMLAGSSVMSCVSCFFLSFGNSESAMIALLCLFGGVSIASWNALDVLTVELYPSDKRTTAFGFLNALCKLAAVLGISIFTSFVGITKAVPILLASTALALGSSLALKLPETRGQVLQ
SIO_010081: SV2A
subclass of: SO_0000673
so part of: SV2A
location: complement(join(612746..612929,614117..614276,614917..615120,615208..615341,615432..615596,616329..616417,616511..616620,616814..616903,617037..617170,617260..617411,617524..617704,618980..619557))
location: region:612746-619557:-1
so has part: feature:618980-619557:-1:exon
so has part: feature:617524-617704:-1:exon
so has part: feature:617260-617411:-1:exon
so has part: feature:617037-617170:-1:exon
so has part: feature:616814-616903:-1:exon
so has part: feature:616511-616620:-1:exon
so has part: feature:616329-616417:-1:exon
so has part: feature:615432-615596:-1:exon
so has part: feature:615208-615341:-1:exon
so has part: feature:614917-615120:-1:exon
so has part: feature:614117-614276:-1:exon
so has part: feature:612746-612929:-1:exon

XP_038024071.1
type: Protein
SIO_000068: ncbiprotein

position:612746:-1
position: 612746
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:619557:-1
position: 619557
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:618980-619557:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:617524-617704:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:617260-617411:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:617037-617170:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:616814-616903:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:616511-616620:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:616329-616417:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:615432-615596:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:615208-615341:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:614917-615120:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:614117-614276:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:612746-612929:-1:exon

LOC119713875
type: Gene
subclass of: SO_0000704
RO_0002162: 8839
gene: LOC119713875
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(622468..633406)
location: region:622468-633406:-1
so has part: feature:622468-633406:-1:exon
subclass of: SO_0000011

119713875
type: Gene
SIO_000068: ncbigene

position:622468:-1
position: 622468
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:633406:-1
position: 633406
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:622468-633406:-1:exon

LOC119713875
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 8839
nc RNA class: lncRNA
gene: LOC119713875
product: uncharacterized LOC119713875
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 32 samples with support for all annotated introns
transcript id: XR_005261015.1
SIO_010081: LOC119713875
subclass of: SO_0000673
so part of: LOC119713875
location: complement(join(622468..624184,624753..624851,628183..628254,632176..633406))
location: region:622468-633406:-1
so has part: feature:632176-633406:-1:exon
so has part: feature:628183-628254:-1:exon
so has part: feature:624753-624851:-1:exon
so has part: feature:622468-624184:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:632176-633406:-1:exon

position:632176:-1
position: 632176
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:628183-628254:-1:exon

position:628183:-1
position: 628183
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:628254:-1
position: 628254
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:624753-624851:-1:exon

position:624753:-1
position: 624753
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:624851:-1
position: 624851
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:622468-624184:-1:exon

position:624184:-1
position: 624184
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC119713793
type: Gene
subclass of: SO_0000704
RO_0002162: 8839
gene: LOC119713793
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(634466..638542)
location: region:634466-638542:-1
so has part: feature:634466-638542:-1:exon
subclass of: SO_0000010

119713793
type: Gene
SIO_000068: ncbigene

position:634466:-1
position: 634466
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:638542:-1
position: 638542
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:634466-638542:-1:exon

LOC119713793
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8839
gene: LOC119713793
product: translation initiation factor IF-2-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_038167841.1
SIO_010081: LOC119713793
subclass of: SO_0000673
so part of: LOC119713793
location: complement(join(634466..634715,636606..638542))
location: region:634466-638542:-1
so has part: feature:636606-638542:-1:exon
so has part: feature:634466-634715:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:636606-638542:-1:exon

position:636606:-1
position: 636606
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:634466-634715:-1:exon

position:634715:-1
position: 634715
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC119713793
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8839
gene: LOC119713793
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: translation initiation factor IF-2-like
translation: MGTEVPVRRPGAGLTFGTGCTSSAPAPSPDLGPGAAGAGWELPRIPPGAGDSNPWGWWHGGDVSPAQRSVLISSWLMCNGTAWGMERPHHGACRQRDLPRDVLIPRRKAAAGTWRPSWRPSRSPRRCLGGSWTVPGAAKGAWTPHSSHGVPARGTPGHPWVPAPTSCCRHPRPCPCFDAAPLTCVGFLRTPGPGGSFPGGHLGFLVLVLVTQLLVTHVPASVLGTRLASQPAESRGAASGSRPRSSSSSLPLLRASSPPAAVGRAAQGPPAPRARGFAPGPPRGGSEGGIEPVTARARWGGSGKQLSFTTARSVTAGGEGLSRCFKNSQQYF
SIO_010081: LOC119713793
subclass of: SO_0000673
so part of: LOC119713793
location: complement(join(634490..634715,636606..637378))
location: region:634490-637378:-1
so has part: feature:636606-637378:-1:exon
so has part: feature:634490-634715:-1:exon

XP_038023769.1
type: Protein
SIO_000068: ncbiprotein

position:634490:-1
position: 634490
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:637378:-1
position: 637378
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:636606-637378:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:634490-634715:-1:exon

HJV
type: Gene
subclass of: SO_0000704
RO_0002162: 8839
gene: HJV
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 638550..642489
location: region:638550-642489:1
so has part: feature:638550-642489:1:exon
subclass of: SO_0000010

119713791
type: Gene
SIO_000068: ncbigene

position:638550:1
position: 638550
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:642489:1
position: 642489
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:638550-642489:1:exon

HJV
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8839
gene: HJV
product: hemojuvelin BMP co-receptor
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 17 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 59 samples with support for all annotated introns
transcript id: XM_038167839.1
SIO_010081: HJV
subclass of: SO_0000673
so part of: HJV
location: join(638550..638683,639433..639935,640351..642489)
location: region:638550-642489:1
so has part: feature:638550-638683:1:exon
so has part: feature:639433-639935:1:exon
so has part: feature:640351-642489:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:638550-638683:1:exon

position:638683:1
position: 638683
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:639433-639935:1:exon

position:639433:1
position: 639433
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:639935:1
position: 639935
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:640351-642489:1:exon

position:640351:1
position: 640351
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

HJV
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8839
gene: HJV
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: hemojuvelin
translation: MGKAACRKSPGQLESPSFFLPALFLLLLFFCSHVSSQCKILRCNSEYVAATLNLRGSGRTAAYCNALRSYSHCTRKTARTCRGDLAFHSAVHGIEDLMIQNNCSKEGPTSPPRPRPPAPNHQGFESLDICDYEKSFLYKHGQPPSYQHCAAFGDPHIRTFHDDFHTCRVEGSWPLLDNDYLFVQATSAPVAKGSNATVTSKLTIIFKNMKECIDQKVYQAEIGNLPAAFEDGSVNGGERPGGSSLAIRELSPGRHVEIRAQYIGTTIAVRQAGRQLSFSIRAAEEVASAFTEEQDLQLCVGGCPRSQRISRSECCSRSRGAAEEARALCKEMLPVEDVYFQSCVFDVVTSGDANFTMAAHGALEDARVFLPDAEKLHIFQAGAGCPHASPSFLLLLLLAACLWVLQSHF
SIO_010081: HJV
subclass of: SO_0000673
so part of: HJV
location: join(638584..638683,639433..639935,640351..640977)
location: region:638584-640977:1
so has part: feature:638584-638683:1:exon
so has part: feature:639433-639935:1:exon
so has part: feature:640351-640977:1:exon

XP_038023767.1
type: Protein
SIO_000068: ncbiprotein

position:638584:1
position: 638584
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:640977:1
position: 640977
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:638584-638683:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:639433-639935:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:640351-640977:1:exon

LOC119713792
type: Gene
subclass of: SO_0000704
RO_0002162: 8839
gene: LOC119713792
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 648413..652028
location: region:648413-652028:1
so has part: feature:648413-652028:1:exon
subclass of: SO_0000010

119713792
type: Gene
SIO_000068: ncbigene

position:648413:1
position: 648413
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:652028:1
position: 652028
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:648413-652028:1:exon

LOC119713792
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8839
gene: LOC119713792
product: thioredoxin interacting protein
exception: unclassified transcription discrepancy
note: The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: deleted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, 15 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 126 samples with support for all annotated introns
transcript id: XM_038167840.1
SIO_010081: LOC119713792
subclass of: SO_0000673
so part of: LOC119713792
location: join(648413..648896,649770..649842,649948..650095,650441..650543,650711..650968,651079..651235,651353..651501,651659..652028)
location: region:648413-652028:1
so has part: feature:648413-648896:1:exon
so has part: feature:649770-649842:1:exon
so has part: feature:649948-650095:1:exon
so has part: feature:650441-650543:1:exon
so has part: feature:650711-650968:1:exon
so has part: feature:651079-651235:1:exon
so has part: feature:651353-651501:1:exon
so has part: feature:651659-652028:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:648413-648896:1:exon

position:648896:1
position: 648896
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:649770-649842:1:exon

position:649770:1
position: 649770
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:649842:1
position: 649842
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:649948-650095:1:exon

position:649948:1
position: 649948
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:650095:1
position: 650095
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:650441-650543:1:exon

position:650441:1
position: 650441
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:650543:1
position: 650543
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:650711-650968:1:exon

position:650711:1
position: 650711
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:650968:1
position: 650968
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:651079-651235:1:exon

position:651079:1
position: 651079
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:651235:1
position: 651235
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:651353-651501:1:exon

position:651353:1
position: 651353
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:651501:1
position: 651501
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:651659-652028:1:exon

position:651659:1
position: 651659
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC119713792
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8839
gene: LOC119713792
exception: unclassified translation discrepancy
note: The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: deleted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: LOW QUALITY PROTEIN: thioredoxin-interacting protein
translation: MVMFKKVKTFLLAFSEPEKVYCSGEKVAGRVLVEVAEVTRVSAVKVLACGVAKVNWAKGPQQCRQEMEYLRFEDVLTLEEQPTDEDGSVILRPGNKYEYKFGFELPQGPLGTSFKGKYGCVDYWVKAFLERPSFPTQETKKRFEVMDPVDVNTPELLSPVAAKKEKKVSCMFIPDGRVSVSAQIDRKGFCEGDEICINADFENTCSRIVVPKAAIIAKHTYLANGQTKVFTQKLSCVRGNHIISGMSESWRGKTIRVKKLKPSILGCNILRVEYFLQIYVSVPGSKKIILELPLVIGSRSGIGSRSSSMASQTSSEMSWVDLNLPDAPEAPPCYLDIVPEDHRLESPTTPLLDDPDSFDSPIFMYAPEFKFMPPPTYTEVDPCVANNNVQ
SIO_010081: LOC119713792
subclass of: SO_0000673
so part of: LOC119713792
location: join(648647..648896,649770..649842,649948..650095,650441..650543,650711..650968,651079..651235,651353..651501,651659..651694)
location: region:648647-651694:1
so has part: feature:648647-648896:1:exon
so has part: feature:649770-649842:1:exon
so has part: feature:649948-650095:1:exon
so has part: feature:650441-650543:1:exon
so has part: feature:650711-650968:1:exon
so has part: feature:651079-651235:1:exon
so has part: feature:651353-651501:1:exon
so has part: feature:651659-651694:1:exon

XP_038023768.1
type: Protein
SIO_000068: ncbiprotein

position:648647:1
position: 648647
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:651694:1
position: 651694
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:648647-648896:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:649770-649842:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:649948-650095:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:650441-650543:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:650711-650968:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:651079-651235:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:651353-651501:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:651659-651694:1:exon

LOC119713731
type: Gene
subclass of: SO_0000704
RO_0002162: 8839
gene: LOC119713731
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(657898..688916)
location: region:657898-688916:-1
so has part: feature:657898-688916:-1:exon
subclass of: SO_0000010

119713731
type: Gene
SIO_000068: ncbigene

position:657898:-1
position: 657898
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:688916:-1
position: 688916
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:657898-688916:-1:exon

LOC119713731
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8839
gene: LOC119713731
product: rho guanine nucleotide exchange factor 2-like
exception: unclassified transcription discrepancy
note: The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: inserted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 95% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_038167710.1
SIO_010081: LOC119713731
subclass of: SO_0000673
so part of: LOC119713731
location: complement(join(657898..657969,659801..660072,660179..660296,660566..660691,660784..661033,661536..661682,661764..661853,671407..671426,671519..671648,671925..671988,672078..672145,672813..672963,683955..684069,684907..684946,685036..685141,685586..685751,685979..686309,688787..688916))
location: region:657898-688916:-1
so has part: feature:688787-688916:-1:exon
so has part: feature:685979-686309:-1:exon
so has part: feature:685586-685751:-1:exon
so has part: feature:685036-685141:-1:exon
so has part: feature:684907-684946:-1:exon
so has part: feature:683955-684069:-1:exon
so has part: feature:672813-672963:-1:exon
so has part: feature:672078-672145:-1:exon
so has part: feature:671925-671988:-1:exon
so has part: feature:671519-671648:-1:exon
so has part: feature:671407-671426:-1:exon
so has part: feature:661764-661853:-1:exon
so has part: feature:661536-661682:-1:exon
so has part: feature:660784-661033:-1:exon
so has part: feature:660566-660691:-1:exon
so has part: feature:660179-660296:-1:exon
so has part: feature:659801-660072:-1:exon
so has part: feature:657898-657969:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:688787-688916:-1:exon

position:688787:-1
position: 688787
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:685979-686309:-1:exon

position:685979:-1
position: 685979
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:686309:-1
position: 686309
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:685586-685751:-1:exon

position:685586:-1
position: 685586
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:685751:-1
position: 685751
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:685036-685141:-1:exon

position:685036:-1
position: 685036
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:685141:-1
position: 685141
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:684907-684946:-1:exon

position:684907:-1
position: 684907
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:684946:-1
position: 684946
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:683955-684069:-1:exon

position:683955:-1
position: 683955
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:684069:-1
position: 684069
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:672813-672963:-1:exon

position:672813:-1
position: 672813
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:672963:-1
position: 672963
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:672078-672145:-1:exon

position:672078:-1
position: 672078
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:672145:-1
position: 672145
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:671925-671988:-1:exon

position:671925:-1
position: 671925
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:671988:-1
position: 671988
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:671519-671648:-1:exon

position:671519:-1
position: 671519
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:671648:-1
position: 671648
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:671407-671426:-1:exon

position:671407:-1
position: 671407
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:671426:-1
position: 671426
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:661764-661853:-1:exon

position:661764:-1
position: 661764
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:661853:-1
position: 661853
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:661536-661682:-1:exon

position:661536:-1
position: 661536
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:661682:-1
position: 661682
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:660784-661033:-1:exon

position:660784:-1
position: 660784
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:661033:-1
position: 661033
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:660566-660691:-1:exon

position:660566:-1
position: 660566
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:660691:-1
position: 660691
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:660179-660296:-1:exon

position:660179:-1
position: 660179
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:660296:-1
position: 660296
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:659801-660072:-1:exon

position:659801:-1
position: 659801
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:660072:-1
position: 660072
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:657898-657969:-1:exon

position:657969:-1
position: 657969
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC119713731
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8839
gene: LOC119713731
exception: unclassified translation discrepancy
note: The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: inserted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: LOW QUALITY PROTEIN: rho guanine nucleotide exchange factor 2-like
translation: MDGPEIFLGPCEGALCGVPGQKRRCMSALEPVTVPSPKSEASWGEEEEEEEEDEEDEERSRGVPLRRACALRTSMRSRDPFRRHSWEPGKELRGVPGYDQLSVSLKGLSPDDIDSSTEQLDGLGRRRWDPRRAPLIHSTESLLSLDEEDEADLQRAQEDARRLQVYGARSAGGCALAKSASLSVIDSFPPAVEISPFASQQSLANGFGAGSCGQLAASGEPGSREGSPLGRTLSFIWRMTGKTKSKEKEKMKEGKEKDARYTNGHLFTTITVSGMTMCFACNKSITAKEALICPTCNVTIHNRCKDTLPNCTKVKQKQQKAALLKNSSALQSVSLRNKTAIRERPNSAIYPSESFRQTLLGPRRGRPSLSLSKSVSTTNIAGTLNDESPLGIRRILSQSTDSLNMRNRTLSVESLIDEGPDVILNQLLSDFETDEKDFEADSWSLAVDNSFLQQHKMDVMKRQDVIYELIQTEIHHVRTLKIMGSVFRRAMLEELQLDPGTVQKIFPCVDELSQIHERFLAQLLERRRDSLAQXSNKNFVINRLGDILVGQFSGSSAEQMKKAYSEFCSRHTKAVKEYKDLLARDKRFQHFVRRMARSPLLRRHGVPECILLVTQRITKYPVLIERILKNSKDNEGDSADLSRALTLVKELISGVNEEVHACEMNARLWDVYRRVDGRAKAPLQWESRAGLFGRDELLRRKLVHSGCMLWKTAAGALQRWAGGVKDSGPIGVEGGGFGPPRSGSPP
SIO_010081: LOC119713731
subclass of: SO_0000673
so part of: LOC119713731
location: complement(join(657898..657969,659801..660072,660179..660296,660566..660691,660784..661033,661536..661682,661764..661853,671407..671426,671519..671648,671925..671988,672078..672145,672813..672963,683955..684069,684907..684946,685036..685141,685586..685751,685979..686283))
location: region:657898-686283:-1
so has part: feature:685979-686283:-1:exon
so has part: feature:685586-685751:-1:exon
so has part: feature:685036-685141:-1:exon
so has part: feature:684907-684946:-1:exon
so has part: feature:683955-684069:-1:exon
so has part: feature:672813-672963:-1:exon
so has part: feature:672078-672145:-1:exon
so has part: feature:671925-671988:-1:exon
so has part: feature:671519-671648:-1:exon
so has part: feature:671407-671426:-1:exon
so has part: feature:661764-661853:-1:exon
so has part: feature:661536-661682:-1:exon
so has part: feature:660784-661033:-1:exon
so has part: feature:660566-660691:-1:exon
so has part: feature:660179-660296:-1:exon
so has part: feature:659801-660072:-1:exon
so has part: feature:657898-657969:-1:exon

XP_038023638.1
type: Protein
SIO_000068: ncbiprotein

position:686283:-1
position: 686283
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:685979-686283:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:685586-685751:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:685036-685141:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:684907-684946:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:683955-684069:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:672813-672963:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:672078-672145:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:671925-671988:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:671519-671648:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:671407-671426:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:661764-661853:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:661536-661682:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:660784-661033:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:660566-660691:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:660179-660296:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:659801-660072:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:657898-657969:-1:exon

POLR3GL
type: Gene
subclass of: SO_0000704
RO_0002162: 8839
gene: POLR3GL
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(661885..665159)
location: region:661885-665159:-1
so has part: feature:661885-665159:-1:exon
subclass of: SO_0000010

119713811
type: Gene
SIO_000068: ncbigene

position:661885:-1
position: 661885
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:665159:-1
position: 665159
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:661885-665159:-1:exon

POLR3GL
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8839
gene: POLR3GL
product: RNA polymerase III subunit GL, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 125 samples with support for all annotated introns
transcript id: XM_038167924.1
SIO_010081: POLR3GL
subclass of: SO_0000673
so part of: POLR3GL
location: complement(join(661885..662426,662510..662623,662722..662795,662894..662950,663051..663119,663197..663326,664542..665156))
location: region:661885-665156:-1
so has part: feature:664542-665156:-1:exon
so has part: feature:663197-663326:-1:exon
so has part: feature:663051-663119:-1:exon
so has part: feature:662894-662950:-1:exon
so has part: feature:662722-662795:-1:exon
so has part: feature:662510-662623:-1:exon
so has part: feature:661885-662426:-1:exon

position:665156:-1
position: 665156
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:664542-665156:-1:exon

position:664542:-1
position: 664542
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:663197-663326:-1:exon

position:663197:-1
position: 663197
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:663326:-1
position: 663326
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:663051-663119:-1:exon

position:663051:-1
position: 663051
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:663119:-1
position: 663119
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:662894-662950:-1:exon

position:662894:-1
position: 662894
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:662950:-1
position: 662950
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:662722-662795:-1:exon

position:662722:-1
position: 662722
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:662795:-1
position: 662795
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:662510-662623:-1:exon

position:662510:-1
position: 662510
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:662623:-1
position: 662623
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:661885-662426:-1:exon

position:662426:-1
position: 662426
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

POLR3GL
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8839
gene: POLR3GL
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: DNA-directed RNA polymerase III subunit RPC7-like isoform X1
translation: MSLFRCPVPSPPPPYPFRGPPIPFPPPYPFSRCPIPFPPPGFPLGLPPHISHFRAAPPHPPPISLFRAPPSPLGFPLPLSPYPPLPPLPQPPPPVLCAPPTAPPGLRAPPPNPPMAGRGRGRGRGQLTFNVEAVGIGKGDALPPPTLQPSPLFPPVEYRPVPLPGGEELEYMLALKQELRGAMRNLPYFIKPGAPRRDIERYSDKYQVSNPIDGAIDWNPDWRRLPRELKIRVRRLRKGRTTVLVPKPKQRAALDKEEAIKKLESLEKKEEEVTSEEEEEKEEEEEGKEEEEEEYDEEEHEEETDYIMSYFDNGEDFGGDSDDNMDEAVY
SIO_010081: POLR3GL
subclass of: SO_0000673
so part of: POLR3GL
location: complement(join(662340..662426,662510..662623,662722..662795,662894..662950,663051..663119,663197..663326,664542..665003))
location: region:662340-665003:-1
so has part: feature:664542-665003:-1:exon
so has part: feature:663197-663326:-1:exon
so has part: feature:663051-663119:-1:exon
so has part: feature:662894-662950:-1:exon
so has part: feature:662722-662795:-1:exon
so has part: feature:662510-662623:-1:exon
so has part: feature:662340-662426:-1:exon

XP_038023852.1
type: Protein
SIO_000068: ncbiprotein

position:662340:-1
position: 662340
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:665003:-1
position: 665003
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:664542-665003:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:663197-663326:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:663051-663119:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:662894-662950:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:662722-662795:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:662510-662623:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:662340-662426:-1:exon

POLR3GL
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8839
gene: POLR3GL
product: RNA polymerase III subunit GL, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 46 samples with support for all annotated introns
transcript id: XM_038167925.1
SIO_010081: POLR3GL
subclass of: SO_0000673
so part of: POLR3GL
location: complement(join(662585..662643,662722..662795,662894..662950,663051..663119,663197..663326,664542..665159))
location: region:662585-665159:-1
so has part: feature:664542-665159:-1:exon
so has part: feature:663197-663326:-1:exon
so has part: feature:663051-663119:-1:exon
so has part: feature:662894-662950:-1:exon
so has part: feature:662722-662795:-1:exon
so has part: feature:662585-662643:-1:exon

position:662585:-1
position: 662585
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:664542-665159:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:663197-663326:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:663051-663119:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:662894-662950:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:662722-662795:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:662585-662643:-1:exon

position:662643:-1
position: 662643
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

POLR3GL
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8839
gene: POLR3GL
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: DNA-directed RNA polymerase III subunit RPC7-like isoform X2
translation: MSLFRCPVPSPPPPYPFRGPPIPFPPPYPFSRCPIPFPPPGFPLGLPPHISHFRAAPPHPPPISLFRAPPSPLGFPLPLSPYPPLPPLPQPPPPVLCAPPTAPPGLRAPPPNPPMAGRGRGRGRGQLTFNVEAVGIGKGDALPPPTLQPSPLFPPVEYRPVPLPGGEELEYMLALKQELRGAMRNLPYFIKPGAPRRDIERYSDKYQVSNPIDGAIDWNPDWRRLPRELKIRVRRLRKGRTTVLVPKPKQRAALDKEEAIKKLELIVPPPRAWRRRRRR
SIO_010081: POLR3GL
subclass of: SO_0000673
so part of: POLR3GL
location: complement(join(662596..662643,662722..662795,662894..662950,663051..663119,663197..663326,664542..665003))
location: region:662596-665003:-1
so has part: feature:664542-665003:-1:exon
so has part: feature:663197-663326:-1:exon
so has part: feature:663051-663119:-1:exon
so has part: feature:662894-662950:-1:exon
so has part: feature:662722-662795:-1:exon
so has part: feature:662596-662643:-1:exon

XP_038023853.1
type: Protein
SIO_000068: ncbiprotein

position:662596:-1
position: 662596
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:664542-665003:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:663197-663326:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:663051-663119:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:662894-662950:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:662722-662795:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:662596-662643:-1:exon

ANKRD34A
type: Gene
subclass of: SO_0000704
RO_0002162: 8839
gene: ANKRD34A
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 666555..669923
location: region:666555-669923:1
so has part: feature:666555-669923:1:exon
subclass of: SO_0000010

119713810
type: Gene
SIO_000068: ncbigene

position:666555:1
position: 666555
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:669923:1
position: 669923
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:666555-669923:1:exon

ANKRD34A
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8839
gene: ANKRD34A
product: ankyrin repeat domain 34A
exception: unclassified transcription discrepancy
note: The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: inserted 2 bases in 2 codons; deleted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 44 samples with support for all annotated introns
transcript id: XM_038167923.1
SIO_010081: ANKRD34A
subclass of: SO_0000673
so part of: ANKRD34A
location: join(666555..666946,667879..669923)
location: region:666555-669923:1
so has part: feature:666555-666946:1:exon
so has part: feature:667879-669923:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:666555-666946:1:exon

position:666946:1
position: 666946
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:667879-669923:1:exon

position:667879:1
position: 667879
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

ANKRD34A
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8839
gene: ANKRD34A
exception: unclassified translation discrepancy
note: The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: inserted 2 bases in 2 codons; deleted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: LOW QUALITY PROTEIN: ankyrin repeat domain-containing protein 34A
translation: MAATGRRLGASIAPTPGTPPRRWGGPRSGYHGPRHVPAPRPPDALRSLTPRPPTPSEDAPGPPRPRRVPPALSGRCGSGLLGTAALRPGGSERAMPSPVRRPPGPAAPPGLAMLPADGSALLRAVAQGKFRLTRLLLEGGAYINEGXAAGQTPLMAACRARYADPLEQPRMVRYLLENGADPNIPDKTGKTXLMHACAERAGAAVAAVLLAHGADPSARDYAGASALVYAINRGDRETLQALLDACKAQGKEVIIITSDTSPSGTKTTRQYLNSPPSPGLEEKRSPALCMSPSDIEVRTAASPRGSEKEEERDVFRFPPPPPPVAATTATVPEPPAGGRPLKRLNSEPWGLVAPGVEASRVPPERLAPGLEGLSLGTRPRRHSVEGREAAGLAGAAWAERVPPACPQPLARRNTAPEAARVKAGRREPPDPEGCPWPPSPPPSPGRGRRCAASAMPLPTPESPPGARRRAPGLLERRGSGTLLLEPLASGRAGFLPPLHAGPHPPGPRGLPVPGSPKGRRKLLRRHSMQTEEMRLLANFQSALSLEPGT
SIO_010081: ANKRD34A
subclass of: SO_0000673
so part of: ANKRD34A
location: join(666853..666946,667879..669433)
location: region:666853-669433:1
so has part: feature:666853-666946:1:exon
so has part: feature:667879-669433:1:exon

XP_038023851.1
type: Protein
SIO_000068: ncbiprotein

position:666853:1
position: 666853
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:669433:1
position: 669433
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:666853-666946:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:667879-669433:1:exon

LOC119713830
type: Gene
subclass of: SO_0000704
RO_0002162: 8839
gene: LOC119713830
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(697442..708339)
location: region:697442-708339:-1
so has part: feature:697442-708339:-1:exon
subclass of: SO_0000010

119713830
type: Gene
SIO_000068: ncbigene

position:697442:-1
position: 697442
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:708339:-1
position: 708339
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:697442-708339:-1:exon

LOC119713830
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8839
gene: LOC119713830
product: Fc receptor-like protein 4, transcript variant X10
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 31 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 13 samples with support for all annotated introns
transcript id: XM_038167960.1
SIO_010081: LOC119713830
subclass of: SO_0000673
so part of: LOC119713830
location: complement(join(697442..697768,698230..698499,698907..699191,699662..699931,700551..700808,701156..701280,701709..701817,708045..708339))
location: region:697442-708339:-1
so has part: feature:708045-708339:-1:exon
so has part: feature:701709-701817:-1:exon
so has part: feature:701156-701280:-1:exon
so has part: feature:700551-700808:-1:exon
so has part: feature:699662-699931:-1:exon
so has part: feature:698907-699191:-1:exon
so has part: feature:698230-698499:-1:exon
so has part: feature:697442-697768:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:708045-708339:-1:exon

position:708045:-1
position: 708045
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:701709-701817:-1:exon

position:701709:-1
position: 701709
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:701817:-1
position: 701817
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:701156-701280:-1:exon

position:701156:-1
position: 701156
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:701280:-1
position: 701280
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:700551-700808:-1:exon

position:700551:-1
position: 700551
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:700808:-1
position: 700808
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:699662-699931:-1:exon

position:699662:-1
position: 699662
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:699931:-1
position: 699931
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:698907-699191:-1:exon

position:698907:-1
position: 698907
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:699191:-1
position: 699191
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:698230-698499:-1:exon

position:698230:-1
position: 698230
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:698499:-1
position: 698499
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:697442-697768:-1:exon

position:697768:-1
position: 697768
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC119713830
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8839
gene: LOC119713830
product: Fc receptor-like protein 4, transcript variant X23
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 23 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_038167974.1
SIO_010081: LOC119713830
subclass of: SO_0000673
so part of: LOC119713830
location: complement(join(697442..697768,698230..698499,698907..699191,699662..699931,701156..701280,701709..701817,705779..705860,708045..708260))
location: region:697442-708260:-1
so has part: feature:708045-708260:-1:exon
so has part: feature:705779-705860:-1:exon
so has part: feature:701709-701817:-1:exon
so has part: feature:701156-701280:-1:exon
so has part: feature:699662-699931:-1:exon
so has part: feature:698907-699191:-1:exon
so has part: feature:698230-698499:-1:exon
so has part: feature:697442-697768:-1:exon

position:708260:-1
position: 708260
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:708045-708260:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:705779-705860:-1:exon

position:705779:-1
position: 705779
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:705860:-1
position: 705860
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:701709-701817:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:701156-701280:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:699662-699931:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:698907-699191:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:698230-698499:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:697442-697768:-1:exon

LOC119713830
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8839
gene: LOC119713830
product: Fc receptor-like protein 4, transcript variant X9
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 31 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 7 samples with support for all annotated introns
transcript id: XM_038167959.1
SIO_010081: LOC119713830
subclass of: SO_0000673
so part of: LOC119713830
location: complement(join(697442..697768,698230..698499,698907..699191,699662..699931,700551..700808,701156..701280,701709..701817,705779..705860,708045..708258))
location: region:697442-708258:-1
so has part: feature:708045-708258:-1:exon
so has part: feature:705779-705860:-1:exon
so has part: feature:701709-701817:-1:exon
so has part: feature:701156-701280:-1:exon
so has part: feature:700551-700808:-1:exon
so has part: feature:699662-699931:-1:exon
so has part: feature:698907-699191:-1:exon
so has part: feature:698230-698499:-1:exon
so has part: feature:697442-697768:-1:exon

position:708258:-1
position: 708258
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:708045-708258:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:705779-705860:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:701709-701817:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:701156-701280:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:700551-700808:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:699662-699931:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:698907-699191:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:698230-698499:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:697442-697768:-1:exon

LOC119713830
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8839
gene: LOC119713830
product: Fc receptor-like protein 4, transcript variant X18
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 31 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 18 samples with support for all annotated introns
transcript id: XM_038167969.1
SIO_010081: LOC119713830
subclass of: SO_0000673
so part of: LOC119713830
location: complement(join(697442..697768,698230..698499,698907..699191,699662..699931,700551..700808,701156..701176,701709..701817,708045..708255))
location: region:697442-708255:-1
so has part: feature:708045-708255:-1:exon
so has part: feature:701709-701817:-1:exon
so has part: feature:701156-701176:-1:exon
so has part: feature:700551-700808:-1:exon
so has part: feature:699662-699931:-1:exon
so has part: feature:698907-699191:-1:exon
so has part: feature:698230-698499:-1:exon
so has part: feature:697442-697768:-1:exon

position:708255:-1
position: 708255
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:708045-708255:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:701709-701817:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:701156-701176:-1:exon

position:701176:-1
position: 701176
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:700551-700808:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:699662-699931:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:698907-699191:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:698230-698499:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:697442-697768:-1:exon

LOC119713830
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8839
gene: LOC119713830
product: Fc receptor-like protein 4, transcript variant X14
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 31 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 19 samples with support for all annotated introns
transcript id: XM_038167965.1
SIO_010081: LOC119713830
subclass of: SO_0000673
so part of: LOC119713830
location: complement(join(697442..697768,698230..698499,698907..699191,699662..699931,700551..700808,701156..701230,701709..701817,708045..708255))
location: region:697442-708255:-1
so has part: feature:708045-708255:-1:exon
so has part: feature:701709-701817:-1:exon
so has part: feature:701156-701230:-1:exon
so has part: feature:700551-700808:-1:exon
so has part: feature:699662-699931:-1:exon
so has part: feature:698907-699191:-1:exon
so has part: feature:698230-698499:-1:exon
so has part: feature:697442-697768:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:708045-708255:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:701709-701817:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:701156-701230:-1:exon

position:701230:-1
position: 701230
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:700551-700808:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:699662-699931:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:698907-699191:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:698230-698499:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:697442-697768:-1:exon

LOC119713830
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8839
gene: LOC119713830
product: Fc receptor-like protein 4, transcript variant X21
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 31 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 12 samples with support for all annotated introns
transcript id: XM_038167972.1
SIO_010081: LOC119713830
subclass of: SO_0000673
so part of: LOC119713830
location: complement(join(697442..697768,698230..698499,698907..699191,699662..699931,700551..700808,701156..701176,701709..701817,705779..705860,708045..708174))
location: region:697442-708174:-1
so has part: feature:708045-708174:-1:exon
so has part: feature:705779-705860:-1:exon
so has part: feature:701709-701817:-1:exon
so has part: feature:701156-701176:-1:exon
so has part: feature:700551-700808:-1:exon
so has part: feature:699662-699931:-1:exon
so has part: feature:698907-699191:-1:exon
so has part: feature:698230-698499:-1:exon
so has part: feature:697442-697768:-1:exon

position:708174:-1
position: 708174
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:708045-708174:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:705779-705860:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:701709-701817:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:701156-701176:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:700551-700808:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:699662-699931:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:698907-699191:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:698230-698499:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:697442-697768:-1:exon

LOC119713830
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8839
gene: LOC119713830
product: Fc receptor-like protein 4, transcript variant X15
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 31 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 9 samples with support for all annotated introns
transcript id: XM_038167966.1
SIO_010081: LOC119713830
subclass of: SO_0000673
so part of: LOC119713830
location: complement(join(697442..697768,698230..698499,698907..699191,699662..699931,700551..700808,701156..701230,701709..701817,705779..705860,708045..708174))
location: region:697442-708174:-1
so has part: feature:708045-708174:-1:exon
so has part: feature:705779-705860:-1:exon
so has part: feature:701709-701817:-1:exon
so has part: feature:701156-701230:-1:exon
so has part: feature:700551-700808:-1:exon
so has part: feature:699662-699931:-1:exon
so has part: feature:698907-699191:-1:exon
so has part: feature:698230-698499:-1:exon
so has part: feature:697442-697768:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:708045-708174:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:705779-705860:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:701709-701817:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:701156-701230:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:700551-700808:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:699662-699931:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:698907-699191:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:698230-698499:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:697442-697768:-1:exon

LOC119713830
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8839
gene: LOC119713830
product: Fc receptor-like protein 4, transcript variant X22
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 31 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_038167973.1
SIO_010081: LOC119713830
subclass of: SO_0000673
so part of: LOC119713830
location: complement(join(697442..697768,698230..698499,698907..699191,699662..699931,700551..700808,701156..701176,701709..701817,706845..707597,708045..708153))
location: region:697442-708153:-1
so has part: feature:708045-708153:-1:exon
so has part: feature:706845-707597:-1:exon
so has part: feature:701709-701817:-1:exon
so has part: feature:701156-701176:-1:exon
so has part: feature:700551-700808:-1:exon
so has part: feature:699662-699931:-1:exon
so has part: feature:698907-699191:-1:exon
so has part: feature:698230-698499:-1:exon
so has part: feature:697442-697768:-1:exon

position:708153:-1
position: 708153
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:708045-708153:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:706845-707597:-1:exon

position:706845:-1
position: 706845
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:707597:-1
position: 707597
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:701709-701817:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:701156-701176:-1:exon

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SIO_000300: 5
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SIO_000300: 6
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SIO_000300: 7
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SIO_000300: 8
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urn:…
SIO_000300: 9
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LOC119713830
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8839
gene: LOC119713830
product: Fc receptor-like protein 4, transcript variant X19
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 31 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_038167970.1
SIO_010081: LOC119713830
subclass of: SO_0000673
so part of: LOC119713830
location: complement(join(697442..697768,698230..698499,698907..699191,699662..699931,700551..700808,701156..701230,701709..701817,706845..707597,708045..708153))
location: region:697442-708153:-1
so has part: feature:708045-708153:-1:exon
so has part: feature:706845-707597:-1:exon
so has part: feature:701709-701817:-1:exon
so has part: feature:701156-701230:-1:exon
so has part: feature:700551-700808:-1:exon
so has part: feature:699662-699931:-1:exon
so has part: feature:698907-699191:-1:exon
so has part: feature:698230-698499:-1:exon
so has part: feature:697442-697768:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:708045-708153:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:706845-707597:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:701709-701817:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:701156-701230:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:700551-700808:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:699662-699931:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:698907-699191:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:698230-698499:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:697442-697768:-1:exon

LOC119713830
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8839
gene: LOC119713830
product: Fc receptor-like protein 4, transcript variant X8
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 31 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_038167958.1
SIO_010081: LOC119713830
subclass of: SO_0000673
so part of: LOC119713830
location: complement(join(697442..697768,698230..698499,698907..699191,699662..699931,700551..700808,701156..701230,701709..701817,703366..704254,706845..707597,708045..708153))
location: region:697442-708153:-1
so has part: feature:708045-708153:-1:exon
so has part: feature:706845-707597:-1:exon
so has part: feature:703366-704254:-1:exon
so has part: feature:701709-701817:-1:exon
so has part: feature:701156-701230:-1:exon
so has part: feature:700551-700808:-1:exon
so has part: feature:699662-699931:-1:exon
so has part: feature:698907-699191:-1:exon
so has part: feature:698230-698499:-1:exon
so has part: feature:697442-697768:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:708045-708153:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:706845-707597:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:703366-704254:-1:exon

position:703366:-1
position: 703366
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:704254:-1
position: 704254
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:701709-701817:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:701156-701230:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:700551-700808:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:699662-699931:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:698907-699191:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:698230-698499:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:697442-697768:-1:exon

LOC119713830
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8839
gene: LOC119713830
product: Fc receptor-like protein 4, transcript variant X16
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 31 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_038167967.1
SIO_010081: LOC119713830
subclass of: SO_0000673
so part of: LOC119713830
location: complement(join(697442..697768,698230..698499,698907..699191,699662..699931,700551..700808,701156..701230,701709..701817,705779..705860,706845..707597,708045..708153))
location: region:697442-708153:-1
so has part: feature:708045-708153:-1:exon
so has part: feature:706845-707597:-1:exon
so has part: feature:705779-705860:-1:exon
so has part: feature:701709-701817:-1:exon
so has part: feature:701156-701230:-1:exon
so has part: feature:700551-700808:-1:exon
so has part: feature:699662-699931:-1:exon
so has part: feature:698907-699191:-1:exon
so has part: feature:698230-698499:-1:exon
so has part: feature:697442-697768:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:708045-708153:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:706845-707597:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:705779-705860:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:701709-701817:-1:exon

urn:…
SIO_000300: 5
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urn:…
SIO_000300: 6
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SIO_000300: 7
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SIO_000300: 8
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SIO_000300: 9
SIO_000628: feature:698230-698499:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:697442-697768:-1:exon

LOC119713830
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8839
gene: LOC119713830
product: Fc receptor-like protein 4, transcript variant X12
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 31 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_038167962.1
SIO_010081: LOC119713830
subclass of: SO_0000673
so part of: LOC119713830
location: complement(join(697442..697768,698230..698499,698907..699191,699662..699931,700551..700808,701156..701280,701709..701817,705779..705860,706845..707597,708045..708153))
location: region:697442-708153:-1
so has part: feature:708045-708153:-1:exon
so has part: feature:706845-707597:-1:exon
so has part: feature:705779-705860:-1:exon
so has part: feature:701709-701817:-1:exon
so has part: feature:701156-701280:-1:exon
so has part: feature:700551-700808:-1:exon
so has part: feature:699662-699931:-1:exon
so has part: feature:698907-699191:-1:exon
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urn:…
SIO_000300: 1
SIO_000628: feature:708045-708153:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:706845-707597:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:705779-705860:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:701709-701817:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:701156-701280:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:700551-700808:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:699662-699931:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:698907-699191:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:698230-698499:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:697442-697768:-1:exon

LOC119713830
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8839
gene: LOC119713830
product: Fc receptor-like protein 4, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 31 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_038167954.1
SIO_010081: LOC119713830
subclass of: SO_0000673
so part of: LOC119713830
location: complement(join(697442..697768,698230..698499,698907..699191,699662..699931,700551..700808,701156..701230,701709..701817,703366..705426,705779..705860,706845..707597,708045..708153))
location: region:697442-708153:-1
so has part: feature:708045-708153:-1:exon
so has part: feature:706845-707597:-1:exon
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so has part: feature:698907-699191:-1:exon
so has part: feature:698230-698499:-1:exon
so has part: feature:697442-697768:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:708045-708153:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:706845-707597:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:705779-705860:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:703366-705426:-1:exon

position:705426:-1
position: 705426
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:701709-701817:-1:exon