Anas platyrhynchos isolate Z2 breed Pekin duck chromosome 25, ZJU1.0, whole genome shotgun sequence.
type: Entry
definition: Anas platyrhynchos isolate Z2 breed Pekin duck chromosome 25, ZJU1.0, whole genome shotgun sequence.
sequence version: NC_051796.1
sequence date: 2020-12-15
sequence: sequence
division: CON
label: NC_051796.1
type: RefSeq
SIO_000068: refseq
dblink: PRJNA681492
dblink: SAMN15588841
keyword: WGS
keyword: RefSeq
source: Anas platyrhynchos (mallard)
organism: Anas platyrhynchos
taxonomy: Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Galloanserae; Anseriformes; Anatidae; Anatinae; Anas.
comment: REFSEQ INFORMATION: The reference sequence is identical to\nCM027267.1.\nAssembly name: ZJU1.0\nThe genomic sequence for this RefSeq record is from the\nwhole-genome assembly released by the Zhejiang University on\n2020/11/23. The original whole-genome shotgun project has the\naccession JACGAL000000000.1.\n\n##Genome-Assembly-Data-START##\nAssembly Provider :: Zhejiang University\nAssembly Method :: FALCON-Unzip v. git 12072017\nAssembly Name :: ZJU1.0\nGenome Representation :: Full\nExpected Final Version :: No\nGenome Coverage :: 143.0x\nSequencing Technology :: PacBio RSII; PacBio Sequel\n##Genome-Assembly-Data-END##\n\n##Genome-Annotation-Data-START##\nAnnotation Provider :: NCBI\nAnnotation Status :: Full annotation\nAnnotation Name :: Anas platyrhynchos Annotation\n Release 104\nAnnotation Version :: 104\nAnnotation Pipeline :: NCBI eukaryotic genome annotation\n pipeline\nAnnotation Software Version :: 8.5\nAnnotation Method :: Best-placed RefSeq; Gnomon\nFeatures Annotated :: Gene; mRNA; CDS; ncRNA\n##Genome-Annotation-Data-END##

sequence
subclass of: SO_0000340
sequence length: 7658487
topology: linear
so has quality: SO_0000987
location: 1..7658487
location: region:1-7658487:1
RO_0002162: 8839

NC_051796
type: RefSeq
SIO_000068: refseq

PRJNA681492
type: BioProject
SIO_000068: bioproject

SAMN15588841
type: BioSample
SIO_000068: biosample

position:1:1
position: 1
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7658487:1
position: 7658487
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

feature:1-7658487:1:source
so part of: sequence
organism: Anas platyrhynchos
mol type: genomic DNA
isolate: Z2
chromosome: 25
sex: pooled male and female
tissue type: multiple
dev stage: adult
breed: Pekin duck

8839
type: Taxonomy
SIO_000068: taxonomy

LOC119713707
type: Gene
subclass of: SO_0000704
RO_0002162: 8839
gene: LOC119713707
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(81243..92273)
location: region:81243-92273:-1
so has part: feature:81243-92273:-1:exon
subclass of: SO_0000010

119713707
type: Gene
SIO_000068: ncbigene

position:81243:-1
position: 81243
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:92273:-1
position: 92273
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:81243-92273:-1:exon

LOC119713707
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8839
gene: LOC119713707
product: zinc finger CCCH domain-containing protein 11A-like
exception: unclassified transcription discrepancy
note: The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: inserted 1 base in 1 codon; deleted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 96% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_038167575.1
SIO_010081: LOC119713707
subclass of: SO_0000673
so part of: LOC119713707
location: complement(join(81243..81660,81920..81982,82707..82818,83114..83194,83700..83819,84344..84546,84973..85096,85685..85804,86006..86199,86571..86623,88018..92273))
location: region:81243-92273:-1
so has part: feature:88018-92273:-1:exon
so has part: feature:86571-86623:-1:exon
so has part: feature:86006-86199:-1:exon
so has part: feature:85685-85804:-1:exon
so has part: feature:84973-85096:-1:exon
so has part: feature:84344-84546:-1:exon
so has part: feature:83700-83819:-1:exon
so has part: feature:83114-83194:-1:exon
so has part: feature:82707-82818:-1:exon
so has part: feature:81920-81982:-1:exon
so has part: feature:81243-81660:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:88018-92273:-1:exon

position:88018:-1
position: 88018
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:86571-86623:-1:exon

position:86571:-1
position: 86571
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:86623:-1
position: 86623
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:86006-86199:-1:exon

position:86006:-1
position: 86006
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:86199:-1
position: 86199
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:85685-85804:-1:exon

position:85685:-1
position: 85685
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:85804:-1
position: 85804
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:84973-85096:-1:exon

position:84973:-1
position: 84973
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:85096:-1
position: 85096
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:84344-84546:-1:exon

position:84344:-1
position: 84344
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:84546:-1
position: 84546
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:83700-83819:-1:exon

position:83700:-1
position: 83700
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:83819:-1
position: 83819
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:83114-83194:-1:exon

position:83114:-1
position: 83114
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:83194:-1
position: 83194
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:82707-82818:-1:exon

position:82707:-1
position: 82707
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:82818:-1
position: 82818
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:81920-81982:-1:exon

position:81920:-1
position: 81920
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:81982:-1
position: 81982
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:81243-81660:-1:exon

position:81660:-1
position: 81660
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC119713707
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8839
gene: LOC119713707
exception: unclassified translation discrepancy
note: The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: inserted 1 base in 1 codon; deleted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: LOW QUALITY PROTEIN: zinc finger CCCH domain-containing protein 11A-like
translation: MSKQGEDCYFYFYSTCTKGDKCAYRHCEAALGNETVCKLWQEGRCFRNVCRFRHMEIDKKRSEIPCYWEKQPGGCQKANCAFRHAKGRDIDGQFFPPSKTTLPSPPESADDALKVAQMSLQQNKLSVQSNPSPQLRXVMKVENSENVPSPTHSPVVINAADDDEDDDDQLSEEGEETRTPVQQPAAEGKNGLRVISTRKGSSTTTKQEGNLNFGIKTLEEIKSQKMKEKNKRHGEGSSRSSLCPVDSMIFPAPEKENVRTVVRTVTLSSKKGEEPVVRLDLADRQGKRKASADDVSTVPVKRSLAERLEKKVEALGNADKAPKRDTGTKRASGLDSWVLYLVFLFVLFQ
SIO_010081: LOC119713707
subclass of: SO_0000673
so part of: LOC119713707
location: complement(join(81488..81660,81920..81982,82707..82818,83114..83194,83700..83819,84344..84546,84973..85096,85685..85804,86006..86059))
location: region:81488-86059:-1
so has part: feature:86006-86059:-1:exon
so has part: feature:85685-85804:-1:exon
so has part: feature:84973-85096:-1:exon
so has part: feature:84344-84546:-1:exon
so has part: feature:83700-83819:-1:exon
so has part: feature:83114-83194:-1:exon
so has part: feature:82707-82818:-1:exon
so has part: feature:81920-81982:-1:exon
so has part: feature:81488-81660:-1:exon

XP_038023503.1
type: Protein
SIO_000068: ncbiprotein

position:81488:-1
position: 81488
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:86059:-1
position: 86059
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:86006-86059:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:85685-85804:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:84973-85096:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:84344-84546:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:83700-83819:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:83114-83194:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:82707-82818:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:81920-81982:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:81488-81660:-1:exon

LOC119713706
type: Gene
subclass of: SO_0000704
RO_0002162: 8839
gene: LOC119713706
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(98658..105223)
location: region:98658-105223:-1
so has part: feature:98658-105223:-1:exon
subclass of: SO_0000010

119713706
type: Gene
SIO_000068: ncbigene

position:98658:-1
position: 98658
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:105223:-1
position: 105223
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:98658-105223:-1:exon

LOC119713706
type: Miscellaneous RNA
subclass of: SO_0000673
RO_0002162: 8839
gene: LOC119713706
product: plasma membrane calcium-transporting ATPase 1-like, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 92 samples with support for all annotated introns
transcript id: XR_005260922.1
SIO_010081: LOC119713706
so part of: LOC119713706
location: complement(join(98658..99584,104476..105223))
location: region:98658-105223:-1
so has part: feature:104476-105223:-1:exon
so has part: feature:98658-99584:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:104476-105223:-1:exon

position:104476:-1
position: 104476
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:98658-99584:-1:exon

position:99584:-1
position: 99584
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC119713706
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8839
gene: LOC119713706
product: plasma membrane calcium-transporting ATPase 1-like, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 53 samples with support for all annotated introns
transcript id: XM_038167574.1
SIO_010081: LOC119713706
subclass of: SO_0000673
so part of: LOC119713706
location: complement(join(98658..99584,104597..105212))
location: region:98658-105212:-1
so has part: feature:104597-105212:-1:exon
so has part: feature:98658-99584:-1:exon

position:105212:-1
position: 105212
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:104597-105212:-1:exon

position:104597:-1
position: 104597
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:98658-99584:-1:exon

LOC119713706
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8839
gene: LOC119713706
product: plasma membrane calcium-transporting ATPase 1-like, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 61 samples with support for all annotated introns
transcript id: XM_038167573.1
SIO_010081: LOC119713706
subclass of: SO_0000673
so part of: LOC119713706
location: complement(join(98658..99584,104579..105212))
location: region:98658-105212:-1
so has part: feature:104579-105212:-1:exon
so has part: feature:98658-99584:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:104579-105212:-1:exon

position:104579:-1
position: 104579
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:98658-99584:-1:exon

LOC119713706
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8839
gene: LOC119713706
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: plasma membrane calcium-transporting ATPase 1-like isoform X2
translation: MDVVYTFQTGASSLQGALRRQPSIIKVVNAFRSSLYEGLEKPESRSSIHNFMTHPEFILEEDEPRTPFLDSAEDDPETDGLKKRGGDSLGGSTALNRNNNAVDSDQTEVTFPEPESPLHSLETSV
SIO_010081: LOC119713706
subclass of: SO_0000673
so part of: LOC119713706
location: complement(join(99279..99584,104597..104668))
location: region:99279-104668:-1
so has part: feature:104597-104668:-1:exon
so has part: feature:99279-99584:-1:exon

XP_038023502.1
type: Protein
SIO_000068: ncbiprotein

position:99279:-1
position: 99279
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:104668:-1
position: 104668
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:104597-104668:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:99279-99584:-1:exon

LOC119713706
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8839
gene: LOC119713706
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: plasma membrane calcium-transporting ATPase 1-like isoform X1
translation: MDVVYTFQTGASSLQGALRRQPSIVSQHHDIKVVNAFRSSLYEGLEKPESRSSIHNFMTHPEFILEEDEPRTPFLDSAEDDPETDGLKKRGGDSLGGSTALNRNNNAVDSDQTEVTFPEPESPLHSLETSV
SIO_010081: LOC119713706
subclass of: SO_0000673
so part of: LOC119713706
location: complement(join(99279..99584,104579..104668))
location: region:99279-104668:-1
so has part: feature:104579-104668:-1:exon
so has part: feature:99279-99584:-1:exon

XP_038023501.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:104579-104668:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:99279-99584:-1:exon

LOC119713051
type: Gene
subclass of: SO_0000704
RO_0002162: 8839
gene: LOC119713051
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(113743..119009)
location: region:113743-119009:-1
so has part: feature:113743-119009:-1:exon
subclass of: SO_0000010

119713051
type: Gene
SIO_000068: ncbigene

position:113743:-1
position: 113743
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:119009:-1
position: 119009
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:113743-119009:-1:exon

LOC119713051
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8839
gene: LOC119713051
product: zinc finger CCCH domain-containing protein 11A-like
exception: unclassified transcription discrepancy
note: The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: inserted 1 base in 1 codon; deleted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 97% coverage of the annotated genomic feature by RNAseq alignments, including 23 samples with support for all annotated introns
transcript id: XM_038167572.1
SIO_010081: LOC119713051
subclass of: SO_0000673
so part of: LOC119713051
location: complement(join(113743..114152,114412..114474,115204..115314,115608..115688,116196..116315,116887..117089,117522..117646,118434..118553,118754..119009))
location: region:113743-119009:-1
so has part: feature:118754-119009:-1:exon
so has part: feature:118434-118553:-1:exon
so has part: feature:117522-117646:-1:exon
so has part: feature:116887-117089:-1:exon
so has part: feature:116196-116315:-1:exon
so has part: feature:115608-115688:-1:exon
so has part: feature:115204-115314:-1:exon
so has part: feature:114412-114474:-1:exon
so has part: feature:113743-114152:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:118754-119009:-1:exon

position:118754:-1
position: 118754
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:118434-118553:-1:exon

position:118434:-1
position: 118434
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:118553:-1
position: 118553
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:117522-117646:-1:exon

position:117522:-1
position: 117522
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:117646:-1
position: 117646
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:116887-117089:-1:exon

position:116887:-1
position: 116887
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:117089:-1
position: 117089
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:116196-116315:-1:exon

position:116196:-1
position: 116196
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:116315:-1
position: 116315
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:115608-115688:-1:exon

position:115608:-1
position: 115608
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:115688:-1
position: 115688
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:115204-115314:-1:exon

position:115204:-1
position: 115204
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:115314:-1
position: 115314
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:114412-114474:-1:exon

position:114412:-1
position: 114412
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:114474:-1
position: 114474
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:113743-114152:-1:exon

position:114152:-1
position: 114152
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC119713051
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8839
gene: LOC119713051
exception: unclassified translation discrepancy
note: The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: inserted 1 base in 1 codon; deleted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: LOW QUALITY PROTEIN: zinc finger CCCH domain-containing protein 11A-like
translation: MSKQGDDCYFYFYSTCTKGDKCAYRHCEAALGNETVCKLWQEGRCFRNVCRFRHMEIDKKRSEIPCYWESQPGGCQKANCAFHHAKGRYIDGQFLPPSKTTLPSPPESADDDLKVAQMSLQQKKLSVQSNPSPQLRXVMKVENSENVPSPTHPPVVINAADDDEDDDDQLSEEGEETRTPVQQPAAKGKNGLRVISTRKGSSTATKQEGNLNFGIKTLEEIKSQKMKEKNKRHGEGSSRSSLCPVDSMIFPAPEKENVRTVVRTVTLSSKKGEEPVVRLDLADRQGKRKASADDVSTVPVKRSLAERLEKKVEALGNADKAPKRDTGTKRASGLDSWVLYLVFLFVLFQ
SIO_010081: LOC119713051
subclass of: SO_0000673
so part of: LOC119713051
location: complement(join(113980..114152,114412..114474,115204..115314,115608..115688,116196..116315,116887..117089,117522..117646,118434..118553,118754..118807))
location: region:113980-118807:-1
so has part: feature:118754-118807:-1:exon
so has part: feature:118434-118553:-1:exon
so has part: feature:117522-117646:-1:exon
so has part: feature:116887-117089:-1:exon
so has part: feature:116196-116315:-1:exon
so has part: feature:115608-115688:-1:exon
so has part: feature:115204-115314:-1:exon
so has part: feature:114412-114474:-1:exon
so has part: feature:113980-114152:-1:exon

XP_038023500.1
type: Protein
SIO_000068: ncbiprotein

position:113980:-1
position: 113980
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:118807:-1
position: 118807
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:118754-118807:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:118434-118553:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:117522-117646:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:116887-117089:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:116196-116315:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:115608-115688:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:115204-115314:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:114412-114474:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:113980-114152:-1:exon

ANKMY1
type: Gene
subclass of: SO_0000704
RO_0002162: 8839
gene: ANKMY1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(134868..171951)
location: region:134868-171951:-1
so has part: feature:134868-171951:-1:exon
subclass of: SO_0000010

101801858
type: Gene
SIO_000068: ncbigene

position:134868:-1
position: 134868
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:171951:-1
position: 171951
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:134868-171951:-1:exon

ANKMY1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8839
gene: ANKMY1
product: ankyrin repeat and MYND domain containing 1, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 95% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_027444277.2
SIO_010081: ANKMY1
subclass of: SO_0000673
so part of: ANKMY1
location: complement(join(134868..135521,145303..145457,147082..147148,149035..149200,150778..150891,151643..151774,154016..154123,157185..157355,159589..159729,160257..160428,161859..161917,163957..164121,164893..165109,166167..166603,167082..167228,171521..171951))
location: region:134868-171951:-1
so has part: feature:171521-171951:-1:exon
so has part: feature:167082-167228:-1:exon
so has part: feature:166167-166603:-1:exon
so has part: feature:164893-165109:-1:exon
so has part: feature:163957-164121:-1:exon
so has part: feature:161859-161917:-1:exon
so has part: feature:160257-160428:-1:exon
so has part: feature:159589-159729:-1:exon
so has part: feature:157185-157355:-1:exon
so has part: feature:154016-154123:-1:exon
so has part: feature:151643-151774:-1:exon
so has part: feature:150778-150891:-1:exon
so has part: feature:149035-149200:-1:exon
so has part: feature:147082-147148:-1:exon
so has part: feature:145303-145457:-1:exon
so has part: feature:134868-135521:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:171521-171951:-1:exon

position:171521:-1
position: 171521
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:167082-167228:-1:exon

position:167082:-1
position: 167082
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:167228:-1
position: 167228
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:166167-166603:-1:exon

position:166167:-1
position: 166167
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:166603:-1
position: 166603
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:164893-165109:-1:exon

position:164893:-1
position: 164893
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:165109:-1
position: 165109
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:163957-164121:-1:exon

position:163957:-1
position: 163957
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:164121:-1
position: 164121
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:161859-161917:-1:exon

position:161859:-1
position: 161859
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:161917:-1
position: 161917
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:160257-160428:-1:exon

position:160257:-1
position: 160257
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:160428:-1
position: 160428
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:159589-159729:-1:exon

position:159589:-1
position: 159589
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:159729:-1
position: 159729
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:157185-157355:-1:exon

position:157185:-1
position: 157185
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:157355:-1
position: 157355
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:154016-154123:-1:exon

position:154016:-1
position: 154016
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:154123:-1
position: 154123
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:151643-151774:-1:exon

position:151643:-1
position: 151643
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:151774:-1
position: 151774
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:150778-150891:-1:exon

position:150778:-1
position: 150778
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:150891:-1
position: 150891
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:149035-149200:-1:exon

position:149035:-1
position: 149035
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:149200:-1
position: 149200
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:147082-147148:-1:exon

position:147082:-1
position: 147082
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:147148:-1
position: 147148
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:145303-145457:-1:exon

position:145303:-1
position: 145303
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:145457:-1
position: 145457
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:134868-135521:-1:exon

position:135521:-1
position: 135521
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

ANKMY1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8839
gene: ANKMY1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: ankyrin repeat and MYND domain-containing protein 1 isoform X2
translation: MATDAGRAAGQPVAGGGEEAGATACGPCGGRGLLCGPGAGERYVGQFYMDHRHGKGICYQPDGSKFTGAFYLGHVEGYGTLEWKDGKKFQGLYKCDERFGPGIESYPDGCQDVGLWHGNHLIKLCAEVPGYFSVLDYPEHCRYIDDRSQRKYISVKEDPFLHSYKHLPFDDKDIFPEGVFAYSHNTDHLALTHSFLEECDAWYFQNTTKLPEEDHWPVANVTPLLVRMQMHAYKHRHCQVEFISDINLILNGIRSSHGPSGPRELAAEHLIQKAARGDFDGVYAILRNELAHPDVADRHGYTALAAAAVHSHNDVINLLLDSGADVNKCSDEGLSALSMCFILYYPEESFKGNIAERNLHSYKRSEQSESSETVVGAEGIILKQQKRWETIQLLLRRGADPNVAWVPPHILFFAVKAADAEAVKLLVERGARTDVQLPSKLGGLTPLHIAASIPGEEGVQIMQYLLNSVLDLDARAEDGNEVYGPDKIHQPQDKEANLSGGVTLQLKNEAGPPQQYFSSNSGPVPEEGGRSALHIACEREDNSEHARDVIRLLLMHKANPNILWSGHSPLSLAIASGNDLAVVELLKHGADPNLTLSGVVKNALCAAVSTTYEQQRTTAQRIALVDKLLEAGADILAPVTLQEGQKKAVGTAVDFAYYKYYQDRRIANTPYHILSASEQEVFQTRQALLEHITAKLRERVILKEKEWDQEELRRSKKLDSVIHACVSKMKERSHHVEEVRLPFFKYCYQCGRSVGVQLSPCMRCHEVFTCSETCRRKSWNERHRHECLGLLEKCTGETVLSVSTAECKKNIIGKKKNGREGKEEKRGRKKSKVRIGGRDHHRKND
SIO_010081: ANKMY1
subclass of: SO_0000673
so part of: ANKMY1
location: complement(join(135358..135521,145303..145457,147082..147148,149035..149200,150778..150891,151643..151774,154016..154123,157185..157355,159589..159729,160257..160428,161859..161917,163957..164121,164893..165109,166167..166603,167082..167228,171521..171643))
location: region:135358-171643:-1
so has part: feature:171521-171643:-1:exon
so has part: feature:167082-167228:-1:exon
so has part: feature:166167-166603:-1:exon
so has part: feature:164893-165109:-1:exon
so has part: feature:163957-164121:-1:exon
so has part: feature:161859-161917:-1:exon
so has part: feature:160257-160428:-1:exon
so has part: feature:159589-159729:-1:exon
so has part: feature:157185-157355:-1:exon
so has part: feature:154016-154123:-1:exon
so has part: feature:151643-151774:-1:exon
so has part: feature:150778-150891:-1:exon
so has part: feature:149035-149200:-1:exon
so has part: feature:147082-147148:-1:exon
so has part: feature:145303-145457:-1:exon
so has part: feature:135358-135521:-1:exon

XP_027300078.1
type: Protein
SIO_000068: ncbiprotein

position:135358:-1
position: 135358
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:171643:-1
position: 171643
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:171521-171643:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:167082-167228:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:166167-166603:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:164893-165109:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:163957-164121:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:161859-161917:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:160257-160428:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:159589-159729:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:157185-157355:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:154016-154123:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:151643-151774:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:150778-150891:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:149035-149200:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:147082-147148:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:145303-145457:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:135358-135521:-1:exon

ANKMY1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8839
gene: ANKMY1
product: ankyrin repeat and MYND domain containing 1, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_027444278.2
SIO_010081: ANKMY1
subclass of: SO_0000673
so part of: ANKMY1
location: complement(join(148653..150683,150778..150891,151643..151774,154016..154123,157185..157355,159589..159729,160257..160428,161859..161917,163957..164121,164893..165109,166167..166603,167082..167228,171521..171951))
location: region:148653-171951:-1
so has part: feature:171521-171951:-1:exon
so has part: feature:167082-167228:-1:exon
so has part: feature:166167-166603:-1:exon
so has part: feature:164893-165109:-1:exon
so has part: feature:163957-164121:-1:exon
so has part: feature:161859-161917:-1:exon
so has part: feature:160257-160428:-1:exon
so has part: feature:159589-159729:-1:exon
so has part: feature:157185-157355:-1:exon
so has part: feature:154016-154123:-1:exon
so has part: feature:151643-151774:-1:exon
so has part: feature:150778-150891:-1:exon
so has part: feature:148653-150683:-1:exon

position:148653:-1
position: 148653
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:171521-171951:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:167082-167228:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:166167-166603:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:164893-165109:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:163957-164121:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:161859-161917:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:160257-160428:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:159589-159729:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:157185-157355:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:154016-154123:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:151643-151774:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:150778-150891:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:148653-150683:-1:exon

position:150683:-1
position: 150683
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

ANKMY1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8839
gene: ANKMY1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: ankyrin repeat and MYND domain-containing protein 1 isoform X1
translation: MATDAGRAAGQPVAGGGEEAGATACGPCGGRGLLCGPGAGERYVGQFYMDHRHGKGICYQPDGSKFTGAFYLGHVEGYGTLEWKDGKKFQGLYKCDERFGPGIESYPDGCQDVGLWHGNHLIKLCAEVPGYFSVLDYPEHCRYIDDRSQRKYISVKEDPFLHSYKHLPFDDKDIFPEGVFAYSHNTDHLALTHSFLEECDAWYFQNTTKLPEEDHWPVANVTPLLVRMQMHAYKHRHCQVEFISDINLILNGIRSSHGPSGPRELAAEHLIQKAARGDFDGVYAILRNELAHPDVADRHGYTALAAAAVHSHNDVINLLLDSGADVNKCSDEGLSALSMCFILYYPEESFKGNIAERNLHSYKRSEQSESSETVVGAEGIILKQQKRWETIQLLLRRGADPNVAWVPPHILFFAVKAADAEAVKLLVERGARTDVQLPSKLGGLTPLHIAASIPGEEGVQIMQYLLNSVLDLDARAEDGNEVYGPDKIHQPQDKEANLSGGVTLQLKNEAGPPQQYFSSNSGPVPEEGGRSALHIACEREDNSEHARDVIRLLLMHKANPNILWSGHSPLSLAIASGNDLAVVELLKHGADPNLTLSGVVKNALCAAVSTTYEQQRTTAQRIALVDKLLEAGADILAPVTLQEGQKKAVGTAVDFAYYKYYQKCSLEICFLSTYVMRCLSFASEL
SIO_010081: ANKMY1
subclass of: SO_0000673
so part of: ANKMY1
location: complement(join(150612..150683,150778..150891,151643..151774,154016..154123,157185..157355,159589..159729,160257..160428,161859..161917,163957..164121,164893..165109,166167..166603,167082..167228,171521..171643))
location: region:150612-171643:-1
so has part: feature:171521-171643:-1:exon
so has part: feature:167082-167228:-1:exon
so has part: feature:166167-166603:-1:exon
so has part: feature:164893-165109:-1:exon
so has part: feature:163957-164121:-1:exon
so has part: feature:161859-161917:-1:exon
so has part: feature:160257-160428:-1:exon
so has part: feature:159589-159729:-1:exon
so has part: feature:157185-157355:-1:exon
so has part: feature:154016-154123:-1:exon
so has part: feature:151643-151774:-1:exon
so has part: feature:150778-150891:-1:exon
so has part: feature:150612-150683:-1:exon

XP_027300079.1
type: Protein
SIO_000068: ncbiprotein

position:150612:-1
position: 150612
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:171521-171643:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:167082-167228:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:166167-166603:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:164893-165109:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:163957-164121:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:161859-161917:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:160257-160428:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:159589-159729:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:157185-157355:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:154016-154123:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:151643-151774:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:150778-150891:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:150612-150683:-1:exon

PUS3
type: Gene
subclass of: SO_0000704
RO_0002162: 8839
gene: PUS3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 190143..196084
location: region:190143-196084:1
so has part: feature:190143-196084:1:exon
subclass of: SO_0000010

101799678
type: Gene
SIO_000068: ncbigene

position:190143:1
position: 190143
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:196084:1
position: 196084
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:190143-196084:1:exon

PUS3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8839
gene: PUS3
product: pseudouridine synthase 3, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 52 samples with support for all annotated introns
transcript id: XM_027444280.1
SIO_010081: PUS3
subclass of: SO_0000673
so part of: PUS3
location: join(190143..190287,192888..193430,194486..195054,195454..195644,195762..196084)
location: region:190143-196084:1
so has part: feature:190143-190287:1:exon
so has part: feature:192888-193430:1:exon
so has part: feature:194486-195054:1:exon
so has part: feature:195454-195644:1:exon
so has part: feature:195762-196084:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:190143-190287:1:exon

position:190287:1
position: 190287
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:192888-193430:1:exon

position:192888:1
position: 192888
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:193430:1
position: 193430
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:194486-195054:1:exon

position:194486:1
position: 194486
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:195054:1
position: 195054
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:195454-195644:1:exon

position:195454:1
position: 195454
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:195644:1
position: 195644
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:195762-196084:1:exon

position:195762:1
position: 195762
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

PUS3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8839
gene: PUS3
product: pseudouridine synthase 3, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 36 samples with support for all annotated introns
transcript id: XM_027444283.1
SIO_010081: PUS3
subclass of: SO_0000673
so part of: PUS3
location: join(190143..190287,192888..193430,194486..194757,195454..195644,195762..196084)
location: region:190143-196084:1
so has part: feature:190143-190287:1:exon
so has part: feature:192888-193430:1:exon
so has part: feature:194486-194757:1:exon
so has part: feature:195454-195644:1:exon
so has part: feature:195762-196084:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:190143-190287:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:192888-193430:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:194486-194757:1:exon

position:194757:1
position: 194757
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:195454-195644:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:195762-196084:1:exon

PUS3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8839
gene: PUS3
product: pseudouridine synthase 3, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 115 samples with support for all annotated introns
transcript id: XM_027444281.1
SIO_010081: PUS3
subclass of: SO_0000673
so part of: PUS3
location: join(190143..190287,192888..193325,194486..195054,195454..195644,195762..196084)
location: region:190143-196084:1
so has part: feature:190143-190287:1:exon
so has part: feature:192888-193325:1:exon
so has part: feature:194486-195054:1:exon
so has part: feature:195454-195644:1:exon
so has part: feature:195762-196084:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:190143-190287:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:192888-193325:1:exon

position:193325:1
position: 193325
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:194486-195054:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:195454-195644:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:195762-196084:1:exon

PUS3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8839
gene: PUS3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: tRNA pseudouridine(38/39) synthase isoform X1
translation: MNIPFREHSRGGRGGSRRAGASGSAAPAPAPAPAPIAAAVQDLRSYQLLIKTPRDALTMADGSGATDREQLLKRVQDLEEEVKRLQEKLFEGKESTVAKDTVSASRKHRKQQQRPFDFSAYSRRHVALKIAYLGWGYQGFASQENTSNTIEEKLFEALKKTRLVDDRQTSNYHRCGRTDKGVSAFGQVRMDSQAPVWGAWDGDSMALVMNGDELGAQYMAVQVISLDLRSNLSEGKKLNGCKGNSEGKNSKSEEELCYTHILNRVLPPDIRVLAWSPVEPDFSARFSCLRRTYRYFFPCADLDVALMHAAAQRYVGTHDFRNLCKMDVANGVINFQRTILSAQVMWVDRGAETGLRDPFRLCQFEVTGQAFLYHQVRCMMAILFLIGQRMESPEIIDELLDVEKNPRKPQYSMAVEFPLVLYDCEFENIQWIYDREVQEFNVTHLQQLWASHAVKTQVLHNMLQGLDAAPVAAGKGPGDVTATVLWGDLKPPVQNQASSFMEGVKARTYKPLLERPKCEGLESRIQHCLRRGRSQAAERAAKRLCTTGGPELASPTSDS
SIO_010081: PUS3
subclass of: SO_0000673
so part of: PUS3
location: join(190165..190287,192888..193430,194486..195054,195454..195644,195762..196015)
location: region:190165-196015:1
so has part: feature:190165-190287:1:exon
so has part: feature:192888-193430:1:exon
so has part: feature:194486-195054:1:exon
so has part: feature:195454-195644:1:exon
so has part: feature:195762-196015:1:exon

XP_027300081.1
type: Protein
SIO_000068: ncbiprotein

position:190165:1
position: 190165
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:196015:1
position: 196015
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:190165-190287:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:192888-193430:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:194486-195054:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:195454-195644:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:195762-196015:1:exon

PUS3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8839
gene: PUS3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: tRNA pseudouridine(38/39) synthase isoform X4
translation: MNIPFREHSRGGRGGSRRAGASGSAAPAPAPAPAPIAAAVQDLRSYQLLIKTPRDALTMADGSGATDREQLLKRVQDLEEEVKRLQEKLFEGKESTVAKDTVSASRKHRKQQQRPFDFSAYSRRHVALKIAYLGWGYQGFASQENTSNTIEEKLFEALKKTRLVDDRQTSNYHRCGRTDKGVSAFGQVRMDSQAPVWGAWDGDSMALVMNGDELGAQYMAVQVISLDLRSNLSEGKKLNGCKGNSEGKNSKSEEELCYTHILNRVLPPDIRVLAWSPVEPDFSARFSCLRRTYRYFFPCADLDVALMHAAAQSMAVEFPLVLYDCEFENIQWIYDREVQEFNVTHLQQLWASHAVKTQVLHNMLQGLDAAPVAAGKGPGDVTATVLWGDLKPPVQNQASSFMEGVKARTYKPLLERPKCEGLESRIQHCLRRGRSQAAERAAKRLCTTGGPELASPTSDS
SIO_010081: PUS3
subclass of: SO_0000673
so part of: PUS3
location: join(190165..190287,192888..193430,194486..194757,195454..195644,195762..196015)
location: region:190165-196015:1
so has part: feature:190165-190287:1:exon
so has part: feature:192888-193430:1:exon
so has part: feature:194486-194757:1:exon
so has part: feature:195454-195644:1:exon
so has part: feature:195762-196015:1:exon

XP_027300084.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:190165-190287:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:192888-193430:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:194486-194757:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:195454-195644:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:195762-196015:1:exon

PUS3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8839
gene: PUS3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: tRNA pseudouridine(38/39) synthase isoform X2
translation: MNIPFREHSRGGRGGSRRAGASGSAAPAPAPAPAPIAAAVQDLRSYQLLIKTPRDALTMADGSGATDREQLLKRVQDLEEEVKRLQEKLFEGKESTVAKDTVSASRKHRKQQQRPFDFSAYSRRHVALKIAYLGWGYQGFASQENTSNTIEEKLFEALKKTRLVDDRQTSNYHRCGRTDKGVSAFGQVISLDLRSNLSEGKKLNGCKGNSEGKNSKSEEELCYTHILNRVLPPDIRVLAWSPVEPDFSARFSCLRRTYRYFFPCADLDVALMHAAAQRYVGTHDFRNLCKMDVANGVINFQRTILSAQVMWVDRGAETGLRDPFRLCQFEVTGQAFLYHQVRCMMAILFLIGQRMESPEIIDELLDVEKNPRKPQYSMAVEFPLVLYDCEFENIQWIYDREVQEFNVTHLQQLWASHAVKTQVLHNMLQGLDAAPVAAGKGPGDVTATVLWGDLKPPVQNQASSFMEGVKARTYKPLLERPKCEGLESRIQHCLRRGRSQAAERAAKRLCTTGGPELASPTSDS
SIO_010081: PUS3
subclass of: SO_0000673
so part of: PUS3
location: join(190165..190287,192888..193325,194486..195054,195454..195644,195762..196015)
location: region:190165-196015:1
so has part: feature:190165-190287:1:exon
so has part: feature:192888-193325:1:exon
so has part: feature:194486-195054:1:exon
so has part: feature:195454-195644:1:exon
so has part: feature:195762-196015:1:exon

XP_027300082.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:190165-190287:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:192888-193325:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:194486-195054:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:195454-195644:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:195762-196015:1:exon

HYLS1
type: Gene
subclass of: SO_0000704
RO_0002162: 8839
gene: HYLS1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(190634..196467)
location: region:190634-196467:-1
so has part: feature:190634-196467:-1:exon
subclass of: SO_0000010

101799378
type: Gene
SIO_000068: ncbigene

position:190634:-1
position: 190634
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:196467:-1
position: 196467
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:190634-196467:-1:exon

HYLS1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8839
gene: HYLS1
product: HYLS1 centriolar and ciliogenesis associated, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 75 samples with support for all annotated introns
transcript id: XM_027444285.2
SIO_010081: HYLS1
subclass of: SO_0000673
so part of: HYLS1
location: complement(join(190634..191874,195551..195632,196329..196467))
location: region:190634-196467:-1
so has part: feature:196329-196467:-1:exon
so has part: feature:195551-195632:-1:exon
so has part: feature:190634-191874:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:196329-196467:-1:exon

position:196329:-1
position: 196329
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:195551-195632:-1:exon

position:195551:-1
position: 195551
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:195632:-1
position: 195632
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:190634-191874:-1:exon

position:191874:-1
position: 191874
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

HYLS1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8839
gene: HYLS1
product: HYLS1 centriolar and ciliogenesis associated, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 124 samples with support for all annotated introns
transcript id: XM_013101044.2
SIO_010081: HYLS1
subclass of: SO_0000673
so part of: HYLS1
location: complement(join(190634..191874,193161..193279))
location: region:190634-193279:-1
so has part: feature:193161-193279:-1:exon
so has part: feature:190634-191874:-1:exon

position:193279:-1
position: 193279
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:193161-193279:-1:exon

position:193161:-1
position: 193161
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:190634-191874:-1:exon

HYLS1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8839
gene: HYLS1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: hydrolethalus syndrome protein 1 isoform X1
translation: MQHLSFDCVAGPELLQDPASPAETMENTQGAERYGWATLSYEEQQGSSESWRVPPRCDPYTVATGLKPALPAFAEPIAAPWSPGNSRRLAMKRKVLRRRPDGGVEVSDESVISTWDTSDEVWSLRQKMCQLSTGPEDSLSEGEIETSSSSLEESSLEPYCHRQTPGDGPPFLLRVLQDSPTSQYTATAGPPKSFIPPRLEALGRNRGKTDRVAKYFEYKREWERFHVPGEDQRKDLRWGIREQMLDRPGLPSRPQRTYVPNAYTVPTDKKRAALRWEVRWDLANGLIPRKNTFF
SIO_010081: HYLS1
subclass of: SO_0000673
so part of: HYLS1
location: complement(join(191038..191874,195551..195598))
location: region:191038-195598:-1
so has part: feature:195551-195598:-1:exon
so has part: feature:191038-191874:-1:exon

XP_027300086.1
type: Protein
SIO_000068: ncbiprotein

position:191038:-1
position: 191038
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:195598:-1
position: 195598
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:195551-195598:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:191038-191874:-1:exon

HYLS1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8839
gene: HYLS1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: hydrolethalus syndrome protein 1 isoform X2
translation: MENTQGAERYGWATLSYEEQQGSSESWRVPPRCDPYTVATGLKPALPAFAEPIAAPWSPGNSRRLAMKRKVLRRRPDGGVEVSDESVISTWDTSDEVWSLRQKMCQLSTGPEDSLSEGEIETSSSSLEESSLEPYCHRQTPGDGPPFLLRVLQDSPTSQYTATAGPPKSFIPPRLEALGRNRGKTDRVAKYFEYKREWERFHVPGEDQRKDLRWGIREQMLDRPGLPSRPQRTYVPNAYTVPTDKKRAALRWEVRWDLANGLIPRKNTFF
SIO_010081: HYLS1
subclass of: SO_0000673
so part of: HYLS1
location: complement(191038..191850)
location: region:191038-191850:-1
so has part: feature:191038-191850:-1:exon

XP_012956498.1
type: Protein
SIO_000068: ncbiprotein

position:191850:-1
position: 191850
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:191038-191850:-1:exon

PUS3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8839
gene: PUS3
product: pseudouridine synthase 3, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 33 samples with support for all annotated introns
transcript id: XM_021273430.2
SIO_010081: PUS3
subclass of: SO_0000673
so part of: PUS3
location: join(192255..192338,192888..193430,194486..195054,195454..195644,195762..196084)
location: region:192255-196084:1
so has part: feature:192255-192338:1:exon
so has part: feature:192888-193430:1:exon
so has part: feature:194486-195054:1:exon
so has part: feature:195454-195644:1:exon
so has part: feature:195762-196084:1:exon

position:192255:1
position: 192255
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:192255-192338:1:exon

position:192338:1
position: 192338
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:192888-193430:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:194486-195054:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:195454-195644:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:195762-196084:1:exon

PUS3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8839
gene: PUS3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: tRNA pseudouridine(38/39) synthase isoform X3
translation: MADGSGATDREQLLKRVQDLEEEVKRLQEKLFEGKESTVAKDTVSASRKHRKQQQRPFDFSAYSRRHVALKIAYLGWGYQGFASQENTSNTIEEKLFEALKKTRLVDDRQTSNYHRCGRTDKGVSAFGQVRMDSQAPVWGAWDGDSMALVMNGDELGAQYMAVQVISLDLRSNLSEGKKLNGCKGNSEGKNSKSEEELCYTHILNRVLPPDIRVLAWSPVEPDFSARFSCLRRTYRYFFPCADLDVALMHAAAQRYVGTHDFRNLCKMDVANGVINFQRTILSAQVMWVDRGAETGLRDPFRLCQFEVTGQAFLYHQVRCMMAILFLIGQRMESPEIIDELLDVEKNPRKPQYSMAVEFPLVLYDCEFENIQWIYDREVQEFNVTHLQQLWASHAVKTQVLHNMLQGLDAAPVAAGKGPGDVTATVLWGDLKPPVQNQASSFMEGVKARTYKPLLERPKCEGLESRIQHCLRRGRSQAAERAAKRLCTTGGPELASPTSDS
SIO_010081: PUS3
subclass of: SO_0000673
so part of: PUS3
location: join(192939..193430,194486..195054,195454..195644,195762..196015)
location: region:192939-196015:1
so has part: feature:192939-193430:1:exon
so has part: feature:194486-195054:1:exon
so has part: feature:195454-195644:1:exon
so has part: feature:195762-196015:1:exon

XP_021129105.1
type: Protein
SIO_000068: ncbiprotein

position:192939:1
position: 192939
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:192939-193430:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:194486-195054:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:195454-195644:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:195762-196015:1:exon

HYLS1
type: Miscellaneous RNA
subclass of: SO_0000673
RO_0002162: 8839
gene: HYLS1
product: HYLS1 centriolar and ciliogenesis associated, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 111 samples with support for all annotated introns
transcript id: XR_005260920.1
SIO_010081: HYLS1
so part of: HYLS1
location: complement(join(193150..193285,195551..195632,196329..196407))
location: region:193150-196407:-1
so has part: feature:196329-196407:-1:exon
so has part: feature:195551-195632:-1:exon
so has part: feature:193150-193285:-1:exon

position:193150:-1
position: 193150
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:196407:-1
position: 196407
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:196329-196407:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:195551-195632:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:193150-193285:-1:exon

position:193285:-1
position: 193285
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

RPUSD4
type: Gene
subclass of: SO_0000704
RO_0002162: 8839
gene: RPUSD4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 196529..199326
location: region:196529-199326:1
so has part: feature:196529-199326:1:exon
subclass of: SO_0000010

101801654
type: Gene
SIO_000068: ncbigene

position:196529:1
position: 196529
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:199326:1
position: 199326
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:196529-199326:1:exon

RPUSD4
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8839
gene: RPUSD4
product: RNA pseudouridine synthase D4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 125 samples with support for all annotated introns
transcript id: XM_027444284.2
SIO_010081: RPUSD4
subclass of: SO_0000673
so part of: RPUSD4
location: join(196529..196714,196812..196965,197517..197718,197952..198045,198124..198274,198543..198640,198784..199326)
location: region:196529-199326:1
so has part: feature:196529-196714:1:exon
so has part: feature:196812-196965:1:exon
so has part: feature:197517-197718:1:exon
so has part: feature:197952-198045:1:exon
so has part: feature:198124-198274:1:exon
so has part: feature:198543-198640:1:exon
so has part: feature:198784-199326:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:196529-196714:1:exon

position:196714:1
position: 196714
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:196812-196965:1:exon

position:196812:1
position: 196812
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:196965:1
position: 196965
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:197517-197718:1:exon

position:197517:1
position: 197517
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:197718:1
position: 197718
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:197952-198045:1:exon

position:197952:1
position: 197952
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:198045:1
position: 198045
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:198124-198274:1:exon

position:198124:1
position: 198124
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:198274:1
position: 198274
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:198543-198640:1:exon

position:198543:1
position: 198543
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:198640:1
position: 198640
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:198784-199326:1:exon

position:198784:1
position: 198784
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

RPUSD4
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8839
gene: RPUSD4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: mitochondrial RNA pseudouridine synthase RPUSD4
translation: MAAGGGALWRRRAAALSRAARSVCGRAAGAERLAGRLRARRREEEEEKKREVPGNPARRRARELAALQRVHPNVLARVLKQGAVYQDEEVVVLNKPYGLPVHGGPGIKNCITDVLPILAKMLENMRAETLHLCHRLDKETTGVMVLARSKEAADRIRLLFKTRQVEKIYWAISVGHPDPAEGIVEIPVVEKEVQSHQPHYKMTLAPNYRLSPEDGKVLKTRKNRSAETAVTRYRILASSSACSLLELQPITGVKHQIRVHLAYGLGCPILGDHKYSHWNKLAPQKLPEITLRRLKLEQSQARHLPLHLHAQRLSLPLGASGGKRIDLVCEPPVFFHRTLRKLELDIDKN
SIO_010081: RPUSD4
subclass of: SO_0000673
so part of: RPUSD4
location: join(196562..196714,196812..196965,197517..197718,197952..198045,198124..198274,198543..198640,198784..198981)
location: region:196562-198981:1
so has part: feature:196562-196714:1:exon
so has part: feature:196812-196965:1:exon
so has part: feature:197517-197718:1:exon
so has part: feature:197952-198045:1:exon
so has part: feature:198124-198274:1:exon
so has part: feature:198543-198640:1:exon
so has part: feature:198784-198981:1:exon

XP_027300085.1
type: Protein
SIO_000068: ncbiprotein

position:196562:1
position: 196562
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:198981:1
position: 198981
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:196562-196714:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:196812-196965:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:197517-197718:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:197952-198045:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:198124-198274:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:198543-198640:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:198784-198981:1:exon

PANX3
type: Gene
subclass of: SO_0000704
RO_0002162: 8839
gene: PANX3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 199468..203818
location: region:199468-203818:1
so has part: feature:199468-203818:1:exon
subclass of: SO_0000010

101799980
type: Gene
SIO_000068: ncbigene

position:199468:1
position: 199468
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:203818:1
position: 203818
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:199468-203818:1:exon

PANX3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8839
gene: PANX3
product: pannexin 3, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 52 samples with support for all annotated introns
transcript id: XM_005021093.5
SIO_010081: PANX3
subclass of: SO_0000673
so part of: PANX3
location: join(199468..200707,201500..201642,201831..202045,202157..202800,203642..203818)
location: region:199468-203818:1
so has part: feature:199468-200707:1:exon
so has part: feature:201500-201642:1:exon
so has part: feature:201831-202045:1:exon
so has part: feature:202157-202800:1:exon
so has part: feature:203642-203818:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:199468-200707:1:exon

position:200707:1
position: 200707
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:201500-201642:1:exon

position:201500:1
position: 201500
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:201642:1
position: 201642
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:201831-202045:1:exon

position:201831:1
position: 201831
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:202045:1
position: 202045
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:202157-202800:1:exon

position:202157:1
position: 202157
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:202800:1
position: 202800
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:203642-203818:1:exon

position:203642:1
position: 203642
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

PANX3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8839
gene: PANX3
product: pannexin 3, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins, and 98% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_021273429.3
SIO_010081: PANX3
subclass of: SO_0000673
so part of: PANX3
location: join(199468..200707,201500..201642,201831..202045,202157..202813,203021..203192)
location: region:199468-203192:1
so has part: feature:199468-200707:1:exon
so has part: feature:201500-201642:1:exon
so has part: feature:201831-202045:1:exon
so has part: feature:202157-202813:1:exon
so has part: feature:203021-203192:1:exon

position:203192:1
position: 203192
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:199468-200707:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:201500-201642:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:201831-202045:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:202157-202813:1:exon

position:202813:1
position: 202813
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:203021-203192:1:exon

position:203021:1
position: 203021
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

PANX3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8839
gene: PANX3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: pannexin-3 isoform X1
translation: MRYLQTYKITCHAACTSDSTRAPGSSTNFHFPVARPVPDRKMSLSHTAAEYMLSDALLPDPSGSRAKGLRLELPSDRMLKFIAVGLPLFLVSLAFAREFSAGSQISCFSPSNFTGKQSAYADTACWESLLHHGFDAEGHAVTKSLWVLKVFPYSLLVVAVLMYLPYLLWRYAATPALHSDLLFIIDELDKSYNRSVRLVQHMRKIQQSSTEPEQFWEEYERARQERYFEFPLLERYLVCKQHSHSLVIIYLLRNLLLLLFLAATCLYLVFLHLNIFFQDEFSCSIKTGLLQAEPHVPPLIPCKLVFFSVFQLISLTVGGVYVLLMPVVIYNALQLCQWDKGFLSVYEMLPAFDLLSRKMLTCPINDLNIILLFLRANISELTSFSRLSAVSALREATADKQDIDTVVDFMTLLAGLEASKPKYEACVPMANGEAIEMKPGAEAKGKATRDSLGSA
SIO_010081: PANX3
subclass of: SO_0000673
so part of: PANX3
location: join(200404..200707,201500..201642,201831..202045,202157..202800,203642..203703)
location: region:200404-203703:1
so has part: feature:200404-200707:1:exon
so has part: feature:201500-201642:1:exon
so has part: feature:201831-202045:1:exon
so has part: feature:202157-202800:1:exon
so has part: feature:203642-203703:1:exon

XP_005021150.2
type: Protein
SIO_000068: ncbiprotein

position:200404:1
position: 200404
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:203703:1
position: 203703
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:200404-200707:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:201500-201642:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:201831-202045:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:202157-202800:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:203642-203703:1:exon

PANX3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8839
gene: PANX3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: pannexin-3 isoform X2
translation: MRYLQTYKITCHAACTSDSTRAPGSSTNFHFPVARPVPDRKMSLSHTAAEYMLSDALLPDPSGSRAKGLRLELPSDRMLKFIAVGLPLFLVSLAFAREFSAGSQISCFSPSNFTGKQSAYADTACWESLLHHGFDAEGHAVTKSLWVLKVFPYSLLVVAVLMYLPYLLWRYAATPALHSDLLFIIDELDKSYNRSVRLVQHMRKIQQSSTEPEQFWEEYERARQERYFEFPLLERYLVCKQHSHSLVIIYLLRNLLLLLFLAATCLYLVFLHLNIFFQDEFSCSIKTGLLQAEPHVPPLIPCKLVFFSVFQLISLTVGGVYVLLMPVVIYNALQLCQWDKGFLSVYEMLPAFDLLSRKMLTCPINDLNIILLFLRANISELTSFSRLSAVSALREATADKQDIDTVVDFMTLLAGLEASKPKYEACVPMANGEAIGRSLGQGRDATTSPRVGRGCYRNSFAEKTAELKPRLWANWGTGRVLIFEEDNSPVC
SIO_010081: PANX3
subclass of: SO_0000673
so part of: PANX3
location: join(200404..200707,201500..201642,201831..202045,202157..202813,203021..203177)
location: region:200404-203177:1
so has part: feature:200404-200707:1:exon
so has part: feature:201500-201642:1:exon
so has part: feature:201831-202045:1:exon
so has part: feature:202157-202813:1:exon
so has part: feature:203021-203177:1:exon

XP_021129104.2
type: Protein
SIO_000068: ncbiprotein

position:203177:1
position: 203177
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:200404-200707:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:201500-201642:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:201831-202045:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:202157-202813:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:203021-203177:1:exon

NRGN
type: Gene
subclass of: SO_0000704
RO_0002162: 8839
gene: NRGN
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 211118..215680
location: region:211118-215680:1
so has part: feature:211118-215680:1:exon
subclass of: SO_0000010

101800173
type: Gene
SIO_000068: ncbigene

position:211118:1
position: 211118
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:215680:1
position: 215680
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:211118-215680:1:exon

NRGN
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8839
gene: NRGN
product: neurogranin
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 8 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 126 samples with support for all annotated introns
transcript id: XM_027444296.2
SIO_010081: NRGN
subclass of: SO_0000673
so part of: NRGN
location: join(211118..211370,213312..213518,214564..215680)
location: region:211118-215680:1
so has part: feature:211118-211370:1:exon
so has part: feature:213312-213518:1:exon
so has part: feature:214564-215680:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:211118-211370:1:exon

position:211370:1
position: 211370
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:213312-213518:1:exon

position:213312:1
position: 213312
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:213518:1
position: 213518
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:214564-215680:1:exon

position:214564:1
position: 214564
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

NRGN
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8839
gene: NRGN
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: neurogranin
translation: MDCCNEGACTKLDEDILDIPLDDPDANAAAAKIQASFRGHMTRKKIKEGEMDRKTKDAECANSTRGGDLRNGD
SIO_010081: NRGN
subclass of: SO_0000673
so part of: NRGN
location: join(211356..211370,213312..213518)
location: region:211356-213518:1
so has part: feature:211356-211370:1:exon
so has part: feature:213312-213518:1:exon

XP_027300097.1
type: Protein
SIO_000068: ncbiprotein

position:211356:1
position: 211356
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:211356-211370:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:213312-213518:1:exon

ESAM
type: Gene
subclass of: SO_0000704
RO_0002162: 8839
gene: ESAM
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(215395..223096)
location: region:215395-223096:-1
so has part: feature:215395-223096:-1:exon
subclass of: SO_0000010

101801460
type: Gene
SIO_000068: ncbigene

position:215395:-1
position: 215395
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:223096:-1
position: 223096
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:215395-223096:-1:exon

ESAM
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8839
gene: ESAM
product: endothelial cell adhesion molecule
exception: unclassified transcription discrepancy
note: The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: deleted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 96% coverage of the annotated genomic feature by RNAseq alignments, including 121 samples with support for all annotated introns
transcript id: XM_027444294.2
SIO_010081: ESAM
subclass of: SO_0000673
so part of: ESAM
location: complement(join(215395..216120,216458..216596,216692..216814,217037..217193,217270..217483,217970..218127,223012..223096))
location: region:215395-223096:-1
so has part: feature:223012-223096:-1:exon
so has part: feature:217970-218127:-1:exon
so has part: feature:217270-217483:-1:exon
so has part: feature:217037-217193:-1:exon
so has part: feature:216692-216814:-1:exon
so has part: feature:216458-216596:-1:exon
so has part: feature:215395-216120:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:223012-223096:-1:exon

position:223012:-1
position: 223012
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:217970-218127:-1:exon

position:217970:-1
position: 217970
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:218127:-1
position: 218127
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:217270-217483:-1:exon

position:217270:-1
position: 217270
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:217483:-1
position: 217483
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:217037-217193:-1:exon

position:217037:-1
position: 217037
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:217193:-1
position: 217193
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:216692-216814:-1:exon

position:216692:-1
position: 216692
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:216814:-1
position: 216814
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:216458-216596:-1:exon

position:216458:-1
position: 216458
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:216596:-1
position: 216596
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:215395-216120:-1:exon

position:216120:-1
position: 216120
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

ESAM
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8839
gene: ESAM
exception: unclassified translation discrepancy
note: The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: deleted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: LOW QUALITY PROTEIN: endothelial cell-selective adhesion molecule
translation: MGALPPGALALAALLGVCSAVLEVHVGTGSVFSVEGQGVVLPAWYTSRSQKKPYVTWLLDKADADPFQILTYLDGVVKVEETELKPRVGFLYPVLTHNISVFINSTRERDSGQYMCTVNVVDDATSTGKNVAVINLTVLVPPAPPACQLRGSPAVGANVTLSCASEKGKPSPAYQWQRMAPTLQVFFPPAQDRARGTLKLTNLSLDMSGLYKCVAENQAGSAECRIILEVHSTREGAIIAGAVLGSLGALATVAFFARRLVGYRRKKRDGQEEAANEIKEDAVAPKTPSWTRTPPADAISKTSTLSSIAGARDRPYGASPLSDTASVLTAAGSYRGPHRAGGCPPPTNGAPWHPPQPPATPGGLPPSSLARAGAVPVMVPAQSRAGSLV
SIO_010081: ESAM
subclass of: SO_0000673
so part of: ESAM
location: complement(join(215787..216120,216458..216596,216692..216814,217037..217193,217270..217483,217970..218127,223012..223057))
location: region:215787-223057:-1
so has part: feature:223012-223057:-1:exon
so has part: feature:217970-218127:-1:exon
so has part: feature:217270-217483:-1:exon
so has part: feature:217037-217193:-1:exon
so has part: feature:216692-216814:-1:exon
so has part: feature:216458-216596:-1:exon
so has part: feature:215787-216120:-1:exon

XP_027300095.2
type: Protein
SIO_000068: ncbiprotein

position:215787:-1
position: 215787
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:223057:-1
position: 223057
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:223012-223057:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:217970-218127:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:217270-217483:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:217037-217193:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:216692-216814:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:216458-216596:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:215787-216120:-1:exon

MSANTD2
type: Gene
subclass of: SO_0000704
RO_0002162: 8839
gene: MSANTD2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(224830..254650)
location: region:224830-254650:-1
so has part: feature:224830-254650:-1:exon
subclass of: SO_0000010

101799061
type: Gene
SIO_000068: ncbigene

position:224830:-1
position: 224830
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:254650:-1
position: 254650
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:224830-254650:-1:exon

MSANTD2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8839
gene: MSANTD2
product: Myb/SANT DNA binding domain containing 2, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 36 samples with support for all annotated introns
transcript id: XM_027444247.2
SIO_010081: MSANTD2
subclass of: SO_0000673
so part of: MSANTD2
location: complement(join(224830..226593,235333..235393,240438..240696,241289..241330,254079..254617))
location: region:224830-254617:-1
so has part: feature:254079-254617:-1:exon
so has part: feature:241289-241330:-1:exon
so has part: feature:240438-240696:-1:exon
so has part: feature:235333-235393:-1:exon
so has part: feature:224830-226593:-1:exon

position:254617:-1
position: 254617
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:254079-254617:-1:exon

position:254079:-1
position: 254079
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:241289-241330:-1:exon

position:241289:-1
position: 241289
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:241330:-1
position: 241330
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:240438-240696:-1:exon

position:240438:-1
position: 240438
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:240696:-1
position: 240696
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:235333-235393:-1:exon

position:235333:-1
position: 235333
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:235393:-1
position: 235393
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:224830-226593:-1:exon

position:226593:-1
position: 226593
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

MSANTD2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8839
gene: MSANTD2
product: Myb/SANT DNA binding domain containing 2, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 64 samples with support for all annotated introns
transcript id: XM_027444246.2
SIO_010081: MSANTD2
subclass of: SO_0000673
so part of: MSANTD2
location: complement(join(224830..226593,235333..235393,240438..240696,241289..241333,254079..254617))
location: region:224830-254617:-1
so has part: feature:254079-254617:-1:exon
so has part: feature:241289-241333:-1:exon
so has part: feature:240438-240696:-1:exon
so has part: feature:235333-235393:-1:exon
so has part: feature:224830-226593:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:254079-254617:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:241289-241333:-1:exon

position:241333:-1
position: 241333
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:240438-240696:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:235333-235393:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:224830-226593:-1:exon

MSANTD2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8839
gene: MSANTD2
product: Myb/SANT DNA binding domain containing 2, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 125 samples with support for all annotated introns
transcript id: XM_027444248.2
SIO_010081: MSANTD2
subclass of: SO_0000673
so part of: MSANTD2
location: complement(join(224830..226593,235333..235393,240438..240696,254079..254616))
location: region:224830-254616:-1
so has part: feature:254079-254616:-1:exon
so has part: feature:240438-240696:-1:exon
so has part: feature:235333-235393:-1:exon
so has part: feature:224830-226593:-1:exon

position:254616:-1
position: 254616
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:254079-254616:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:240438-240696:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:235333-235393:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:224830-226593:-1:exon

MSANTD2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8839
gene: MSANTD2
product: Myb/SANT DNA binding domain containing 2, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 15 samples with support for all annotated introns
transcript id: XM_038167560.1
SIO_010081: MSANTD2
subclass of: SO_0000673
so part of: MSANTD2
location: complement(join(224830..226593,235333..235393,240438..240696,254508..254591))
location: region:224830-254591:-1
so has part: feature:254508-254591:-1:exon
so has part: feature:240438-240696:-1:exon
so has part: feature:235333-235393:-1:exon
so has part: feature:224830-226593:-1:exon

position:254591:-1
position: 254591
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:254508-254591:-1:exon

position:254508:-1
position: 254508
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:240438-240696:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:235333-235393:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:224830-226593:-1:exon

MSANTD2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8839
gene: MSANTD2
product: Myb/SANT DNA binding domain containing 2, transcript variant X5
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 79 samples with support for all annotated introns
transcript id: XM_005021088.5
SIO_010081: MSANTD2
subclass of: SO_0000673
so part of: MSANTD2
location: complement(join(225136..226593,235333..235393,240438..240696,248018..250582))
location: region:225136-250582:-1
so has part: feature:248018-250582:-1:exon
so has part: feature:240438-240696:-1:exon
so has part: feature:235333-235393:-1:exon
so has part: feature:225136-226593:-1:exon

position:225136:-1
position: 225136
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:250582:-1
position: 250582
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:248018-250582:-1:exon

position:248018:-1
position: 248018
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:240438-240696:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:235333-235393:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:225136-226593:-1:exon

MSANTD2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8839
gene: MSANTD2
product: Myb/SANT DNA binding domain containing 2, transcript variant X6
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 41 samples with support for all annotated introns
transcript id: XM_038167561.1
SIO_010081: MSANTD2
subclass of: SO_0000673
so part of: MSANTD2
location: complement(join(225136..226593,235333..235393,240438..242116,248018..250582))
location: region:225136-250582:-1
so has part: feature:248018-250582:-1:exon
so has part: feature:240438-242116:-1:exon
so has part: feature:235333-235393:-1:exon
so has part: feature:225136-226593:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:248018-250582:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:240438-242116:-1:exon

position:242116:-1
position: 242116
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:235333-235393:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:225136-226593:-1:exon

MSANTD2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8839
gene: MSANTD2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: myb/SANT-like DNA-binding domain-containing protein 2 isoform X4
translation: MAASCGSSQLPAAEPPLKIPKMETLRRCYSRVKEHGVGKRKSSYTFEQLEQVFGQGGWDSQPCQPVLINSSGLYQELESDGSTMEEYSQEDWGNHSQDLHCYQTGEQELDEMPTTKRTLKIKQESSEDTQKRDVMQNIMQILESVQLKWELFQSWTDFSRLHLSNKLAIFGIGYNTRWKEDIRYHYAEISSQVPLGKRLREYFNSEKPEGRVIMTRVQKMNWKNVYYKFLEITISEARCLELHMEIDWIPIAHSKPTGGNIVQYLLPGGIPKSPGLYAIGYEECHEKPHSPLMEHRGTDPGNETQGELEVPSPQASLRVEMESARIIYCYLGIAEVRTLQQCLFLHFQANTKTFSKEWVGINAFLSQNCIVEPGVSPKSIYIKFVEVERDFLSAGSLVECLEKAIGYPLKFNN
SIO_010081: MSANTD2
subclass of: SO_0000673
so part of: MSANTD2
location: complement(join(225741..226593,235333..235393,240438..240696,254508..254576))
location: region:225741-254576:-1
so has part: feature:254508-254576:-1:exon
so has part: feature:240438-240696:-1:exon
so has part: feature:235333-235393:-1:exon
so has part: feature:225741-226593:-1:exon

XP_038023488.1
type: Protein
SIO_000068: ncbiprotein

position:225741:-1
position: 225741
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:254576:-1
position: 254576
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:254508-254576:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:240438-240696:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:235333-235393:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:225741-226593:-1:exon

MSANTD2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8839
gene: MSANTD2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: myb/SANT-like DNA-binding domain-containing protein 2 isoform X3
translation: MAASCGSSQLPAAEPPLKIPKMEVLSPGSPGALSDGNPSLSDPSTPSGASPLGPGPAAGGAGLGGGGGAGGRGGASPSVSFSPGGAAAAAAAAACRGMSWTPAETNALIAVWGNERLVEARYQQLEGAGTVFGSKAPGPAMYERVSRALAELGYERTPSQCRERIKTLRRCYSRVKEHGVGKRKSSYTFEQLEQVFGQGGWDSQPCQPVLINSSGLYQELESDGSTMEEYSQEDWGNHSQDLHCYQTGEQELDEMPTTKRTLKIKQESSEDTQKRDVMQNIMQILESVQLKWELFQSWTDFSRLHLSNKLAIFGIGYNTRWKEDIRYHYAEISSQVPLGKRLREYFNSEKPEGRVIMTRVQKMNWKNVYYKFLEITISEARCLELHMEIDWIPIAHSKPTGGNIVQYLLPGGIPKSPGLYAIGYEECHEKPHSPLMEHRGTDPGNETQGELEVPSPQASLRVEMESARIIYCYLGIAEVRTLQQCLFLHFQANTKTFSKEWVGINAFLSQNCIVEPGVSPKSIYIKFVEVERDFLSAGSLVECLEKAIGYPLKFNN
SIO_010081: MSANTD2
subclass of: SO_0000673
so part of: MSANTD2
location: complement(join(225741..226593,235333..235393,240438..240696,254079..254576))
location: region:225741-254576:-1
so has part: feature:254079-254576:-1:exon
so has part: feature:240438-240696:-1:exon
so has part: feature:235333-235393:-1:exon
so has part: feature:225741-226593:-1:exon

XP_027300049.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:254079-254576:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:240438-240696:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:235333-235393:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:225741-226593:-1:exon

MSANTD2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8839
gene: MSANTD2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: myb/SANT-like DNA-binding domain-containing protein 2 isoform X2
translation: MAASCGSSQLPAAEPPLKIPKMEVLSPGSPGALSDGNPSLSDPSTPSGASPLGPGPAAGGAGLGGGGGAGGRGGASPSVSFSPGGAAAAAAAAACRGMSWTPAETNALIAVWGNERLVEARYQQLEGAGTVFGSKAPGPAMYERVSRALAELGYERTPSQCRERIKLHKRQSELVRNAKYTLRRCYSRVKEHGVGKRKSSYTFEQLEQVFGQGGWDSQPCQPVLINSSGLYQELESDGSTMEEYSQEDWGNHSQDLHCYQTGEQELDEMPTTKRTLKIKQESSEDTQKRDVMQNIMQILESVQLKWELFQSWTDFSRLHLSNKLAIFGIGYNTRWKEDIRYHYAEISSQVPLGKRLREYFNSEKPEGRVIMTRVQKMNWKNVYYKFLEITISEARCLELHMEIDWIPIAHSKPTGGNIVQYLLPGGIPKSPGLYAIGYEECHEKPHSPLMEHRGTDPGNETQGELEVPSPQASLRVEMESARIIYCYLGIAEVRTLQQCLFLHFQANTKTFSKEWVGINAFLSQNCIVEPGVSPKSIYIKFVEVERDFLSAGSLVECLEKAIGYPLKFNN
SIO_010081: MSANTD2
subclass of: SO_0000673
so part of: MSANTD2
location: complement(join(225741..226593,235333..235393,240438..240696,241289..241330,254079..254576))
location: region:225741-254576:-1
so has part: feature:254079-254576:-1:exon
so has part: feature:241289-241330:-1:exon
so has part: feature:240438-240696:-1:exon
so has part: feature:235333-235393:-1:exon
so has part: feature:225741-226593:-1:exon

XP_027300048.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:254079-254576:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:241289-241330:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:240438-240696:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:235333-235393:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:225741-226593:-1:exon

MSANTD2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8839
gene: MSANTD2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: myb/SANT-like DNA-binding domain-containing protein 2 isoform X1
translation: MAASCGSSQLPAAEPPLKIPKMEVLSPGSPGALSDGNPSLSDPSTPSGASPLGPGPAAGGAGLGGGGGAGGRGGASPSVSFSPGGAAAAAAAAACRGMSWTPAETNALIAVWGNERLVEARYQQLEGAGTVFGSKAPGPAMYERVSRALAELGYERTPSQCRERIKQLHKRQSELVRNAKYTLRRCYSRVKEHGVGKRKSSYTFEQLEQVFGQGGWDSQPCQPVLINSSGLYQELESDGSTMEEYSQEDWGNHSQDLHCYQTGEQELDEMPTTKRTLKIKQESSEDTQKRDVMQNIMQILESVQLKWELFQSWTDFSRLHLSNKLAIFGIGYNTRWKEDIRYHYAEISSQVPLGKRLREYFNSEKPEGRVIMTRVQKMNWKNVYYKFLEITISEARCLELHMEIDWIPIAHSKPTGGNIVQYLLPGGIPKSPGLYAIGYEECHEKPHSPLMEHRGTDPGNETQGELEVPSPQASLRVEMESARIIYCYLGIAEVRTLQQCLFLHFQANTKTFSKEWVGINAFLSQNCIVEPGVSPKSIYIKFVEVERDFLSAGSLVECLEKAIGYPLKFNN
SIO_010081: MSANTD2
subclass of: SO_0000673
so part of: MSANTD2
location: complement(join(225741..226593,235333..235393,240438..240696,241289..241333,254079..254576))
location: region:225741-254576:-1
so has part: feature:254079-254576:-1:exon
so has part: feature:241289-241333:-1:exon
so has part: feature:240438-240696:-1:exon
so has part: feature:235333-235393:-1:exon
so has part: feature:225741-226593:-1:exon

XP_027300047.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:254079-254576:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:241289-241333:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:240438-240696:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:235333-235393:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:225741-226593:-1:exon

MSANTD2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8839
gene: MSANTD2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: myb/SANT-like DNA-binding domain-containing protein 2 isoform X5
translation: MEGDLLPECCLKPFRETLRRCYSRVKEHGVGKRKSSYTFEQLEQVFGQGGWDSQPCQPVLINSSGLYQELESDGSTMEEYSQEDWGNHSQDLHCYQTGEQELDEMPTTKRTLKIKQESSEDTQKRDVMQNIMQILESVQLKWELFQSWTDFSRLHLSNKLAIFGIGYNTRWKEDIRYHYAEISSQVPLGKRLREYFNSEKPEGRVIMTRVQKMNWKNVYYKFLEITISEARCLELHMEIDWIPIAHSKPTGGNIVQYLLPGGIPKSPGLYAIGYEECHEKPHSPLMEHRGTDPGNETQGELEVPSPQASLRVEMESARIIYCYLGIAEVRTLQQCLFLHFQANTKTFSKEWVGINAFLSQNCIVEPGVSPKSIYIKFVEVERDFLSAGSLVECLEKAIGYPLKFNN
SIO_010081: MSANTD2
subclass of: SO_0000673
so part of: MSANTD2
location: complement(join(225741..226593,235333..235393,240438..240696,248018..248065))
location: region:225741-248065:-1
so has part: feature:248018-248065:-1:exon
so has part: feature:240438-240696:-1:exon
so has part: feature:235333-235393:-1:exon
so has part: feature:225741-226593:-1:exon

XP_005021145.1
type: Protein
SIO_000068: ncbiprotein

position:248065:-1
position: 248065
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:248018-248065:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:240438-240696:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:235333-235393:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:225741-226593:-1:exon

MSANTD2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8839
gene: MSANTD2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: myb/SANT-like DNA-binding domain-containing protein 2 isoform X6
translation: MEEYSQEDWGNHSQDLHCYQTGEQELDEMPTTKRTLKIKQESSEDTQKRDVMQNIMQILESVQLKWELFQSWTDFSRLHLSNKLAIFGIGYNTRWKEDIRYHYAEISSQVPLGKRLREYFNSEKPEGRVIMTRVQKMNWKNVYYKFLEITISEARCLELHMEIDWIPIAHSKPTGGNIVQYLLPGGIPKSPGLYAIGYEECHEKPHSPLMEHRGTDPGNETQGELEVPSPQASLRVEMESARIIYCYLGIAEVRTLQQCLFLHFQANTKTFSKEWVGINAFLSQNCIVEPGVSPKSIYIKFVEVERDFLSAGSLVECLEKAIGYPLKFNN
SIO_010081: MSANTD2
subclass of: SO_0000673
so part of: MSANTD2
location: complement(join(225741..226593,235333..235393,240438..240516))
location: region:225741-240516:-1
so has part: feature:240438-240516:-1:exon
so has part: feature:235333-235393:-1:exon
so has part: feature:225741-226593:-1:exon

XP_038023489.1
type: Protein
SIO_000068: ncbiprotein

position:240516:-1
position: 240516
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:240438-240516:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:235333-235393:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:225741-226593:-1:exon

MSANTD2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8839
gene: MSANTD2
product: Myb/SANT DNA binding domain containing 2, transcript variant X7
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 63 samples with support for all annotated introns
transcript id: XM_027444249.2
SIO_010081: MSANTD2
subclass of: SO_0000673
so part of: MSANTD2
location: complement(join(226433..226593,240438..240696,241289..241333,254079..254629))
location: region:226433-254629:-1
so has part: feature:254079-254629:-1:exon
so has part: feature:241289-241333:-1:exon
so has part: feature:240438-240696:-1:exon
so has part: feature:226433-226593:-1:exon

position:226433:-1
position: 226433
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:254629:-1
position: 254629
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:254079-254629:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:241289-241333:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:240438-240696:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:226433-226593:-1:exon

MSANTD2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8839
gene: MSANTD2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: myb/SANT-like DNA-binding domain-containing protein 2 isoform X7
translation: MAASCGSSQLPAAEPPLKIPKMEVLSPGSPGALSDGNPSLSDPSTPSGASPLGPGPAAGGAGLGGGGGAGGRGGASPSVSFSPGGAAAAAAAAACRGMSWTPAETNALIAVWGNERLVEARYQQLEGAGTVFGSKAPGPAMYERVSRALAELGYERTPSQCRERIKQLHKRQSELVRNAKYTLRRCYSRVKEHGVGKRKSSYTFEQLEQVFGQGGWDSQPCQPVLINSSGLYQELESDGSTMEEYSQEDWGNHSQDLHCYQTGEQELGSAT
SIO_010081: MSANTD2
subclass of: SO_0000673
so part of: MSANTD2
location: complement(join(226580..226593,240438..240696,241289..241333,254079..254576))
location: region:226580-254576:-1
so has part: feature:254079-254576:-1:exon
so has part: feature:241289-241333:-1:exon
so has part: feature:240438-240696:-1:exon
so has part: feature:226580-226593:-1:exon

XP_027300050.1
type: Protein
SIO_000068: ncbiprotein

position:226580:-1
position: 226580
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:254079-254576:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:241289-241333:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:240438-240696:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:226580-226593:-1:exon

LOC119713703
type: Gene
subclass of: SO_0000704
RO_0002162: 8839
gene: LOC119713703
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(229815..233097)
location: region:229815-233097:-1
so has part: feature:229815-233097:-1:exon
subclass of: SO_0000011

119713703
type: Gene
SIO_000068: ncbigene

position:229815:-1
position: 229815
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:233097:-1
position: 233097
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:229815-233097:-1:exon

LOC119713703
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 8839
nc RNA class: lncRNA
gene: LOC119713703
product: uncharacterized LOC119713703
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XR_005260914.1
SIO_010081: LOC119713703
subclass of: SO_0000673
so part of: LOC119713703
location: complement(join(229815..230028,231946..233097))
location: region:229815-233097:-1
so has part: feature:231946-233097:-1:exon
so has part: feature:229815-230028:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:231946-233097:-1:exon

position:231946:-1
position: 231946
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:229815-230028:-1:exon

position:230028:-1
position: 230028
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

MSANTD2
type: Miscellaneous RNA
subclass of: SO_0000673
RO_0002162: 8839
gene: MSANTD2
product: Myb/SANT DNA binding domain containing 2, transcript variant X12
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 28 samples with support for all annotated introns
transcript id: XR_003492453.2
SIO_010081: MSANTD2
so part of: MSANTD2
location: complement(join(240560..240696,251390..251537,254079..254647))
location: region:240560-254647:-1
so has part: feature:254079-254647:-1:exon
so has part: feature:251390-251537:-1:exon
so has part: feature:240560-240696:-1:exon

position:240560:-1
position: 240560
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:254647:-1
position: 254647
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:254079-254647:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:251390-251537:-1:exon

position:251390:-1
position: 251390
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:251537:-1
position: 251537
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:240560-240696:-1:exon

MSANTD2
type: Miscellaneous RNA
subclass of: SO_0000673
RO_0002162: 8839
gene: MSANTD2
product: Myb/SANT DNA binding domain containing 2, transcript variant X9
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 25 samples with support for all annotated introns
transcript id: XR_003492450.2
SIO_010081: MSANTD2
so part of: MSANTD2
location: complement(join(240598..240696,241289..241330,241987..242116,254079..254650))
location: region:240598-254650:-1
so has part: feature:254079-254650:-1:exon
so has part: feature:241987-242116:-1:exon
so has part: feature:241289-241330:-1:exon
so has part: feature:240598-240696:-1:exon

position:240598:-1
position: 240598
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:254079-254650:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:241987-242116:-1:exon

position:241987:-1
position: 241987
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:241289-241330:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:240598-240696:-1:exon

MSANTD2
type: Miscellaneous RNA
subclass of: SO_0000673
RO_0002162: 8839
gene: MSANTD2
product: Myb/SANT DNA binding domain containing 2, transcript variant X8
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 33 samples with support for all annotated introns
transcript id: XR_003492449.2
SIO_010081: MSANTD2
so part of: MSANTD2
location: complement(join(240600..240696,241289..241333,241987..242116,254079..254650))
location: region:240600-254650:-1
so has part: feature:254079-254650:-1:exon
so has part: feature:241987-242116:-1:exon
so has part: feature:241289-241333:-1:exon
so has part: feature:240600-240696:-1:exon

position:240600:-1
position: 240600
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:254079-254650:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:241987-242116:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:241289-241333:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:240600-240696:-1:exon

MSANTD2
type: Miscellaneous RNA
subclass of: SO_0000673
RO_0002162: 8839
gene: MSANTD2
product: Myb/SANT DNA binding domain containing 2, transcript variant X10
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 43 samples with support for all annotated introns
transcript id: XR_003492451.2
SIO_010081: MSANTD2
so part of: MSANTD2
location: complement(join(250600..250772,251390..251537,254079..254647))
location: region:250600-254647:-1
so has part: feature:254079-254647:-1:exon
so has part: feature:251390-251537:-1:exon
so has part: feature:250600-250772:-1:exon

position:250600:-1
position: 250600
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:254079-254647:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:251390-251537:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:250600-250772:-1:exon

position:250772:-1
position: 250772
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

MSANTD2
type: Miscellaneous RNA
subclass of: SO_0000673
RO_0002162: 8839
gene: MSANTD2
product: Myb/SANT DNA binding domain containing 2, transcript variant X11
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 10 samples with support for all annotated introns
transcript id: XR_005260913.1
SIO_010081: MSANTD2
so part of: MSANTD2
location: complement(join(250600..250785,251390..251537,254079..254647))
location: region:250600-254647:-1
so has part: feature:254079-254647:-1:exon
so has part: feature:251390-251537:-1:exon
so has part: feature:250600-250785:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:254079-254647:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:251390-251537:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:250600-250785:-1:exon

position:250785:-1
position: 250785
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

ROBO3
type: Gene
subclass of: SO_0000704
RO_0002162: 8839
gene: ROBO3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 261402..271170
location: region:261402-271170:1
so has part: feature:261402-271170:1:exon
subclass of: SO_0000010

101801269
type: Gene
SIO_000068: ncbigene

position:261402:1
position: 261402
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:271170:1
position: 271170
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:261402-271170:1:exon

ROBO3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8839
gene: ROBO3
product: roundabout guidance receptor 3
exception: unclassified transcription discrepancy
note: The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: deleted 2 bases in 2 codons; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins, and 94% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_038167675.1
SIO_010081: ROBO3
subclass of: SO_0000673
so part of: ROBO3
location: join(261402..261779,263652..263978,264623..264780,264852..264972,265048..265186,265555..265682,265767..265891,265974..266145,266252..266460,266608..266940,267027..267193,267282..267403,267495..267711,267779..267891,268179..268350,268463..268648,268726..268867,268934..269022,269104..269293,269377..269542,269609..269824,270110..270171,270250..270327,270398..270505,270585..271170)
location: region:261402-271170:1
so has part: feature:261402-261779:1:exon
so has part: feature:263652-263978:1:exon
so has part: feature:264623-264780:1:exon
so has part: feature:264852-264972:1:exon
so has part: feature:265048-265186:1:exon
so has part: feature:265555-265682:1:exon
so has part: feature:265767-265891:1:exon
so has part: feature:265974-266145:1:exon
so has part: feature:266252-266460:1:exon
so has part: feature:266608-266940:1:exon
so has part: feature:267027-267193:1:exon
so has part: feature:267282-267403:1:exon
so has part: feature:267495-267711:1:exon
so has part: feature:267779-267891:1:exon
so has part: feature:268179-268350:1:exon
so has part: feature:268463-268648:1:exon
so has part: feature:268726-268867:1:exon
so has part: feature:268934-269022:1:exon
so has part: feature:269104-269293:1:exon
so has part: feature:269377-269542:1:exon
so has part: feature:269609-269824:1:exon
so has part: feature:270110-270171:1:exon
so has part: feature:270250-270327:1:exon
so has part: feature:270398-270505:1:exon
so has part: feature:270585-271170:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:261402-261779:1:exon

position:261779:1
position: 261779
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:263652-263978:1:exon

position:263652:1
position: 263652
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:263978:1
position: 263978
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:264623-264780:1:exon

position:264623:1
position: 264623
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:264780:1
position: 264780
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:264852-264972:1:exon

position:264852:1
position: 264852
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:264972:1
position: 264972
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:265048-265186:1:exon

position:265048:1
position: 265048
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:265186:1
position: 265186
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:265555-265682:1:exon

position:265555:1
position: 265555
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:265682:1
position: 265682
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:265767-265891:1:exon

position:265767:1
position: 265767
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:265891:1
position: 265891
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:265974-266145:1:exon

position:265974:1
position: 265974
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:266145:1
position: 266145
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:266252-266460:1:exon

position:266252:1
position: 266252
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:266460:1
position: 266460
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:266608-266940:1:exon

position:266608:1
position: 266608
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:266940:1
position: 266940
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:267027-267193:1:exon

position:267027:1
position: 267027
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:267193:1
position: 267193
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:267282-267403:1:exon

position:267282:1
position: 267282
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:267403:1
position: 267403
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:267495-267711:1:exon

position:267495:1
position: 267495
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:267711:1
position: 267711
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:267779-267891:1:exon

position:267779:1
position: 267779
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:267891:1
position: 267891
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:268179-268350:1:exon

position:268179:1
position: 268179
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:268350:1
position: 268350
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:268463-268648:1:exon

position:268463:1
position: 268463
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:268648:1
position: 268648
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:268726-268867:1:exon

position:268726:1
position: 268726
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:268867:1
position: 268867
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:268934-269022:1:exon

position:268934:1
position: 268934
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:269022:1
position: 269022
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:269104-269293:1:exon

position:269104:1
position: 269104
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:269293:1
position: 269293
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:269377-269542:1:exon

position:269377:1
position: 269377
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:269542:1
position: 269542
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:269609-269824:1:exon

position:269609:1
position: 269609
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:269824:1
position: 269824
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 22
SIO_000628: feature:270110-270171:1:exon

position:270110:1
position: 270110
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:270171:1
position: 270171
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 23
SIO_000628: feature:270250-270327:1:exon

position:270250:1
position: 270250
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:270327:1
position: 270327
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 24
SIO_000628: feature:270398-270505:1:exon

position:270398:1
position: 270398
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:270505:1
position: 270505
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 25
SIO_000628: feature:270585-271170:1:exon

position:270585:1
position: 270585
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

ROBO3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8839
gene: ROBO3
exception: unclassified translation discrepancy
note: The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: deleted 2 bases in 2 codons; substituted 1 base at 1 genomic stop codon; Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
transl except: (pos:269772..269774,aa:OTHER)
product: LOW QUALITY PROTEIN: roundabout homolog 3
translation: MLRYLLKTLLQMNLFADSLASEMSNSSELLLGLNGSITALDLHNLTAGNGSHPQLEDSAPRIVEHPSDLLVSKGEPATLSCKAEGRPPPTIEWYKDGERVETDHEDPRSHRTLLPSGSLFFLRIIHGRRGKPDEGVYVCVARNYLGEATSRNASLEVAVLRDDFRQPPGDVVVAVGEPAVLECVPPRGHPEPTVSWKKNGALLNDKDQRITIRGGKLMMATTHKSDAGIYVCVATNMVGERDSEPAELVVFERPTFSKWPLNQAVLVDEMAEFPCEALGDPQPTARWRKEDGELPPGRWELLADNTLRISRVRVEDEGTYTCVAENSVGKSEASGTLIVRVPPQLVTWPHNQSVPPGHSVTFQCETTGNPPPAVFWQKEGSQTLLFPGQPPQPASRFSVAPGGAMTIAAVQPTDAGYYLCQAISVAGSVLAKALLEVEAAPTEHGPPVIHWGPANHTVLPVGATVWLPCWVAGDPQPHVAWLKDGRAMPGPETRTSLLENGTLQISSLRVTDSGQYECVATSSMGETRWSGTLQVQGELWGCCGTREAMGLGKQLPWVSAPLLTGDGSGLSPPPPEPAILPQPPSTPLVTNVTKSSVTLSWKGNEQSSGTTVTYVVEAFSEAAGGPWQTVAANVEGETHTVSGLVPDTVYLFLVRAVSAHGLSDPSGVSEPIRTQDASPTQPGLNPQQVPTELAQVAVHLQEPVVLPPGAVRLSWTVEPPSPFVQGYQVLYRRRGGRWEARDVRAPGERGALLTGLRRGQDYEVKVRPYFHHLHGPDSAVRALRTPEAAPSAPPRAVSAVGNGTSVRISWQPPPLAEQNGVIRDYRIWCLGNESRFHINQSVEGTVLATVLQGLVPGVPYRAEVAAATGAGVGARSAPVPIHIAPPVEREAGPVGRGGVAEHLAEMARRPAFIAGIGGACWLVLAGFGAWLYGRRRRRKELSHFTASFAYAPTGAPMGAAGPCRGPTALSAQPPSLSALTFLHTPAPARGSPRAAVGGHPWLVDAWCGGGTSSLDTAERYYNEAGISRYIAQTEPFGAGATEGPIYSSIEVGSEELRTFHRPCSQHWPRPLATLYAHMAPGRPEHGKKLGKAVQTPMLSWTELLPPPPSASELSQYAEEEEVKKEEEEEEEVVEEEDEEGSLGLEDRCPLGEDVLQPAASSPATPAGCWSPAVLAPAPREDICSPHRFDSPRLPRXEMPLAQAARPASPDVLSSHGPDTSEGHMPRAHRPHGTGKTRSETLKSRPKPKGSRYRREQHLGADLPPPPPPPLPPPGETPSQEPSGAERKAAHRPPRQGDIVPYSKPSFLAHGCSTTGSASSRGSTSSRGHGSGRSRHPDPLSPCPPHEER
SIO_010081: ROBO3
subclass of: SO_0000673
so part of: ROBO3
location: join(261632..261779,263652..263978,264623..264780,264852..264972,265048..265186,265555..265682,265767..265891,265974..266145,266252..266460,266608..266940,267027..267193,267282..267403,267495..267711,267779..267891,268179..268350,268463..268648,268726..268867,268934..269022,269104..269293,269377..269542,269609..269824,270110..270171,270250..270327,270398..270505,270585..270745)
location: region:261632-270745:1
so has part: feature:261632-261779:1:exon
so has part: feature:263652-263978:1:exon
so has part: feature:264623-264780:1:exon
so has part: feature:264852-264972:1:exon
so has part: feature:265048-265186:1:exon
so has part: feature:265555-265682:1:exon
so has part: feature:265767-265891:1:exon
so has part: feature:265974-266145:1:exon
so has part: feature:266252-266460:1:exon
so has part: feature:266608-266940:1:exon
so has part: feature:267027-267193:1:exon
so has part: feature:267282-267403:1:exon
so has part: feature:267495-267711:1:exon
so has part: feature:267779-267891:1:exon
so has part: feature:268179-268350:1:exon
so has part: feature:268463-268648:1:exon
so has part: feature:268726-268867:1:exon
so has part: feature:268934-269022:1:exon
so has part: feature:269104-269293:1:exon
so has part: feature:269377-269542:1:exon
so has part: feature:269609-269824:1:exon
so has part: feature:270110-270171:1:exon
so has part: feature:270250-270327:1:exon
so has part: feature:270398-270505:1:exon
so has part: feature:270585-270745:1:exon

XP_038023603.1
type: Protein
SIO_000068: ncbiprotein

position:261632:1
position: 261632
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:270745:1
position: 270745
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:261632-261779:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:263652-263978:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:264623-264780:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:264852-264972:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:265048-265186:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:265555-265682:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:265767-265891:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:265974-266145:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:266252-266460:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:266608-266940:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:267027-267193:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:267282-267403:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:267495-267711:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:267779-267891:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:268179-268350:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:268463-268648:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:268726-268867:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:268934-269022:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:269104-269293:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:269377-269542:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:269609-269824:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:270110-270171:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:270250-270327:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:270398-270505:1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:270585-270745:1:exon

ROBO4
type: Gene
subclass of: SO_0000704
RO_0002162: 8839
gene: ROBO4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(270781..277130)
location: region:270781-277130:-1
so has part: feature:270781-277130:-1:exon
subclass of: SO_0000010

101801074
type: Gene
SIO_000068: ncbigene

position:270781:-1
position: 270781
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:277130:-1
position: 277130
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:270781-277130:-1:exon

ROBO4
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8839
gene: ROBO4
product: roundabout guidance receptor 4
exception: unclassified transcription discrepancy
note: The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: deleted 2 bases in 2 codons; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments, including 102 samples with support for all annotated introns
transcript id: XM_027444228.2
SIO_010081: ROBO4
subclass of: SO_0000673
so part of: ROBO4
location: complement(join(270781..272609,272730..273016,273098..273220,273788..273918,274007..274157,274240..274411,274921..275042,275115..275334,275433..275548,276181..276308,276383..276521,276596..276874,276969..277130))
location: region:270781-277130:-1
so has part: feature:276969-277130:-1:exon
so has part: feature:276596-276874:-1:exon
so has part: feature:276383-276521:-1:exon
so has part: feature:276181-276308:-1:exon
so has part: feature:275433-275548:-1:exon
so has part: feature:275115-275334:-1:exon
so has part: feature:274921-275042:-1:exon
so has part: feature:274240-274411:-1:exon
so has part: feature:274007-274157:-1:exon
so has part: feature:273788-273918:-1:exon
so has part: feature:273098-273220:-1:exon
so has part: feature:272730-273016:-1:exon
so has part: feature:270781-272609:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:276969-277130:-1:exon

position:276969:-1
position: 276969
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:276596-276874:-1:exon

position:276596:-1
position: 276596
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:276874:-1
position: 276874
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:276383-276521:-1:exon

position:276383:-1
position: 276383
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:276521:-1
position: 276521
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:276181-276308:-1:exon

position:276181:-1
position: 276181
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:276308:-1
position: 276308
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:275433-275548:-1:exon

position:275433:-1
position: 275433
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:275548:-1
position: 275548
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:275115-275334:-1:exon

position:275115:-1
position: 275115
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:275334:-1
position: 275334
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:274921-275042:-1:exon

position:274921:-1
position: 274921
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:275042:-1
position: 275042
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:274240-274411:-1:exon

position:274240:-1
position: 274240
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:274411:-1
position: 274411
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:274007-274157:-1:exon

position:274007:-1
position: 274007
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:274157:-1
position: 274157
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:273788-273918:-1:exon

position:273788:-1
position: 273788
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:273918:-1
position: 273918
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:273098-273220:-1:exon

position:273098:-1
position: 273098
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:273220:-1
position: 273220
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:272730-273016:-1:exon

position:272730:-1
position: 272730
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:273016:-1
position: 273016
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:270781-272609:-1:exon

position:272609:-1
position: 272609
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

ROBO4
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8839
gene: ROBO4
exception: unclassified translation discrepancy
note: The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: deleted 2 bases in 2 codons; Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: LOW QUALITY PROTEIN: roundabout homolog 4
translation: MASGWATALRLGLWATALCLGGCHPLGGDAEPHTMVERPAVLRDNFRLQPGDLVATAGQVLELDCVPPAGHPEPRVSWRKDGVTLRPAGGRHQVTRGKLRVAPARRTDAGVYVCVAANAAGERHSRGAHVTVLEKPAIVRQPSDAVVVAGGTVELGCSAQGDPTPRVQWHKENGDLPWGRHEVDQEHTLRLYAVTAADAGTYICTAQSQLGSAAATARVQVEDLLPAGRREVTLQDLLAMRLQLDNGTALPTTAAAWLRWRMVTPGPAPEGYAVLYRCLLPVGTAWSQQDVGRELSTVIPALQRGYQYEFKVRPYAKGAWGLDSNSWHLWIPEEVPSAAPQHVTVGQVEPGNSTVVVRWEPPPPDAHNGIIRGYQVWCLGEGWLHPTNRTVDRGTHRLEIPLPVSGARYCIQVAAFNGAGLGVPSNATCSVLEVTAGSTGVVRALRQPAVIAAAGSLLWLALLALLLLLCQRHARQDALARHREGDSDAPWLSSPWKPSCVPQNLSGSSSLSSRLLGSDSRDPQPSPLSSEPPSLSPATSPSCSDHRRGHRKPSTLSPAPWERIHKRELDRVHSTPVVAAGLGTIPIPVSGGEWGTRFGLEAGLLQQKGQDGDAALAGGDLWWLPALISPKARRGSASLASIGTETLVAPRGQPRAWHPAGTRFLATGCPRDMSPVTGNPRDPSPVTRSPRNVSPVPRNPRDMSPVPRRPRDMSPVPRNPRDMSPVLRRPRDMSPVTRSPKDVSLVMRHPKDASLVTRNPRDTSPVTRSPIDTPPVAGSCRDVFLATRHGKDMSPARGCPGNMSPVSRCPEDMSPVIRHSKEMSPVTKRPRDMSPATGHSLLTTYHENKSPVAGHPKDTSPDTKHPRDTFLVTRHPRDVFPDTRYPEDTSVVTRHPRDLATVTGHPKNMLLATRHPEDASPDPAHLSLALSDGVLTPQQVAKDLEQAREAAHPMDTPGMEHPPMSAASPTHPRCVPVPRPLSPPHTYGYICGPSASELGDGEEEEEEEDEEEEKTDVWDQGGSPGGSLLNGWGSVSEGNVPSTRCSLASSSDGSFLLDASFARALAVAVDSLCFSLEDADGALVPVSRQASFPLCGEVALGTGTGSPWARVASKQGGLLARDRRDGNTAAPSI
SIO_010081: ROBO4
subclass of: SO_0000673
so part of: ROBO4
location: complement(join(271195..272609,272730..273016,273098..273220,273788..273918,274007..274157,274240..274411,274921..275042,275115..275334,275433..275548,276181..276308,276383..276521,276596..276874,276969..277089))
location: region:271195-277089:-1
so has part: feature:276969-277089:-1:exon
so has part: feature:276596-276874:-1:exon
so has part: feature:276383-276521:-1:exon
so has part: feature:276181-276308:-1:exon
so has part: feature:275433-275548:-1:exon
so has part: feature:275115-275334:-1:exon
so has part: feature:274921-275042:-1:exon
so has part: feature:274240-274411:-1:exon
so has part: feature:274007-274157:-1:exon
so has part: feature:273788-273918:-1:exon
so has part: feature:273098-273220:-1:exon
so has part: feature:272730-273016:-1:exon
so has part: feature:271195-272609:-1:exon

XP_027300029.2
type: Protein
SIO_000068: ncbiprotein

position:271195:-1
position: 271195
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:277089:-1
position: 277089
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:276969-277089:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:276596-276874:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:276383-276521:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:276181-276308:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:275433-275548:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:275115-275334:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:274921-275042:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:274240-274411:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:274007-274157:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:273788-273918:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:273098-273220:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:272730-273016:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:271195-272609:-1:exon

HEPACAM
type: Gene
subclass of: SO_0000704
RO_0002162: 8839
gene: HEPACAM
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(277535..282909)
location: region:277535-282909:-1
so has part: feature:277535-282909:-1:exon
subclass of: SO_0000010

101800885
type: Gene
SIO_000068: ncbigene

position:277535:-1
position: 277535
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:282909:-1
position: 282909
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:277535-282909:-1:exon

HEPACAM
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8839
gene: HEPACAM
product: hepatic and glial cell adhesion molecule, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 39 samples with support for all annotated introns
transcript id: XM_038167696.1
SIO_010081: HEPACAM
subclass of: SO_0000673
so part of: HEPACAM
location: complement(join(277535..279276,279359..279429,279537..279607,280061..280154,280245..280526,280756..281097,282770..282909))
location: region:277535-282909:-1
so has part: feature:282770-282909:-1:exon
so has part: feature:280756-281097:-1:exon
so has part: feature:280245-280526:-1:exon
so has part: feature:280061-280154:-1:exon
so has part: feature:279537-279607:-1:exon
so has part: feature:279359-279429:-1:exon
so has part: feature:277535-279276:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:282770-282909:-1:exon

position:282770:-1
position: 282770
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:280756-281097:-1:exon

position:280756:-1
position: 280756
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:281097:-1
position: 281097
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:280245-280526:-1:exon

position:280245:-1
position: 280245
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:280526:-1
position: 280526
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:280061-280154:-1:exon

position:280061:-1
position: 280061
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:280154:-1
position: 280154
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:279537-279607:-1:exon

position:279537:-1
position: 279537
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:279607:-1
position: 279607
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:279359-279429:-1:exon

position:279359:-1
position: 279359
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:279429:-1
position: 279429
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:277535-279276:-1:exon

position:279276:-1
position: 279276
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

HEPACAM
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8839
gene: HEPACAM
product: hepatic and glial cell adhesion molecule, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 7 samples with support for all annotated introns
transcript id: XM_038167695.1
SIO_010081: HEPACAM
subclass of: SO_0000673
so part of: HEPACAM
location: complement(join(277535..279276,279359..279429,279537..279607,280061..280154,280245..280526,280756..281159,282770..282905))
location: region:277535-282905:-1
so has part: feature:282770-282905:-1:exon
so has part: feature:280756-281159:-1:exon
so has part: feature:280245-280526:-1:exon
so has part: feature:280061-280154:-1:exon
so has part: feature:279537-279607:-1:exon
so has part: feature:279359-279429:-1:exon
so has part: feature:277535-279276:-1:exon

position:282905:-1
position: 282905
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:282770-282905:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:280756-281159:-1:exon

position:281159:-1
position: 281159
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:280245-280526:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:280061-280154:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:279537-279607:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:279359-279429:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:277535-279276:-1:exon

HEPACAM
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8839
gene: HEPACAM
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: hepatocyte cell adhesion molecule isoform X2
translation: MWGAVAAPCLLPAAWLLALHAGLLAGVNITSPSALVRGTAGKAALLSVRYASASPDKPVVKWQLKRDKPVTVVQSIGTEIIGNLRPDYRDRIRVLENGSLLISPLQLADEGAYEVEVSITDDTFTGEKTINLTVDIPISKPQVLVASSTVLELSEFFTLNCSHENGTKPTYTWLKDGRPLSNDSRLLLSPDQKILTITRVLMADDDVYSCLVENPISHGRSIPVKLTVYRRSSLYIILSTGGIFLLVTLVTVCACWKPSKKPKQQAEPPPPDYTEQDEEHPKHEAETIPRSTDHDRKAPLALYILKEQDTPAPQEDSPPPAGRSPGRGARRYHRSPAPTRPPRSPPGSPVRSRTAPRLLRATGVPAIREQEEGSALEISA
SIO_010081: HEPACAM
subclass of: SO_0000673
so part of: HEPACAM
location: complement(join(279058..279276,279359..279429,279537..279607,280061..280154,280245..280526,280756..281097,282770..282833))
location: region:279058-282833:-1
so has part: feature:282770-282833:-1:exon
so has part: feature:280756-281097:-1:exon
so has part: feature:280245-280526:-1:exon
so has part: feature:280061-280154:-1:exon
so has part: feature:279537-279607:-1:exon
so has part: feature:279359-279429:-1:exon
so has part: feature:279058-279276:-1:exon

XP_038023624.1
type: Protein
SIO_000068: ncbiprotein

position:279058:-1
position: 279058
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:282833:-1
position: 282833
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:282770-282833:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:280756-281097:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:280245-280526:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:280061-280154:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:279537-279607:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:279359-279429:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:279058-279276:-1:exon

HEPACAM
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8839
gene: HEPACAM
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: hepatocyte cell adhesion molecule isoform X1
translation: MPAARCLAPGAARRGFSPFSEGRDAAPAVSPPSPGLLAGVNITSPSALVRGTAGKAALLSVRYASASPDKPVVKWQLKRDKPVTVVQSIGTEIIGNLRPDYRDRIRVLENGSLLISPLQLADEGAYEVEVSITDDTFTGEKTINLTVDIPISKPQVLVASSTVLELSEFFTLNCSHENGTKPTYTWLKDGRPLSNDSRLLLSPDQKILTITRVLMADDDVYSCLVENPISHGRSIPVKLTVYRRSSLYIILSTGGIFLLVTLVTVCACWKPSKKPKQQAEPPPPDYTEQDEEHPKHEAETIPRSTDHDRKAPLALYILKEQDTPAPQEDSPPPAGRSPGRGARRYHRSPAPTRPPRSPPGSPVRSRTAPRLLRATGVPAIREQEEGSALEISA
SIO_010081: HEPACAM
subclass of: SO_0000673
so part of: HEPACAM
location: complement(join(279058..279276,279359..279429,279537..279607,280061..280154,280245..280526,280756..281159,282770..282810))
location: region:279058-282810:-1
so has part: feature:282770-282810:-1:exon
so has part: feature:280756-281159:-1:exon
so has part: feature:280245-280526:-1:exon
so has part: feature:280061-280154:-1:exon
so has part: feature:279537-279607:-1:exon
so has part: feature:279359-279429:-1:exon
so has part: feature:279058-279276:-1:exon

XP_038023623.1
type: Protein
SIO_000068: ncbiprotein

position:282810:-1
position: 282810
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:282770-282810:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:280756-281159:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:280245-280526:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:280061-280154:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:279537-279607:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:279359-279429:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:279058-279276:-1:exon

CCDC15
type: Gene
subclass of: SO_0000704
RO_0002162: 8839
gene: CCDC15
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 284074..301576
location: region:284074-301576:1
so has part: feature:284074-301576:1:exon
subclass of: SO_0000010

101798452
type: Gene
SIO_000068: ncbigene

position:284074:1
position: 284074
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:301576:1
position: 301576
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:284074-301576:1:exon

CCDC15
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8839
gene: CCDC15
product: coiled-coil domain containing 15
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 85 samples with support for all annotated introns
transcript id: XM_027444234.2
SIO_010081: CCDC15
subclass of: SO_0000673
so part of: CCDC15
location: join(284074..284118,284219..284387,286615..286764,287678..287866,288712..288828,292672..292827,295136..295255,297192..297295,299851..300030,300098..300246,301173..301576)
location: region:284074-301576:1
so has part: feature:284074-284118:1:exon
so has part: feature:284219-284387:1:exon
so has part: feature:286615-286764:1:exon
so has part: feature:287678-287866:1:exon
so has part: feature:288712-288828:1:exon
so has part: feature:292672-292827:1:exon
so has part: feature:295136-295255:1:exon
so has part: feature:297192-297295:1:exon
so has part: feature:299851-300030:1:exon
so has part: feature:300098-300246:1:exon
so has part: feature:301173-301576:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:284074-284118:1:exon

position:284118:1
position: 284118
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:284219-284387:1:exon

position:284219:1
position: 284219
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:284387:1
position: 284387
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:286615-286764:1:exon

position:286615:1
position: 286615
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:286764:1
position: 286764
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:287678-287866:1:exon

position:287678:1
position: 287678
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:287866:1
position: 287866
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:288712-288828:1:exon

position:288712:1
position: 288712
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:288828:1
position: 288828
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:292672-292827:1:exon

position:292672:1
position: 292672
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:292827:1
position: 292827
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:295136-295255:1:exon

position:295136:1
position: 295136
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:295255:1
position: 295255
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:297192-297295:1:exon

position:297192:1
position: 297192
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:297295:1
position: 297295
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:299851-300030:1:exon

position:299851:1
position: 299851
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:300030:1
position: 300030
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:300098-300246:1:exon

position:300098:1
position: 300098
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:300246:1
position: 300246
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:301173-301576:1:exon

position:301173:1
position: 301173
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

CCDC15
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8839
gene: CCDC15
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: coiled-coil domain-containing protein 15
translation: MPPSCRERRGAGGRPAGSPRRVLAARSSRVAPVGAWVESGPPGPQRGAAFASAFRVEEELKEQQREKAASLRRFQGEVKQRVNQQVRMRRKQQLQKSCEAAEKETCLAMQYSDSVLHLTPKKNTCVFRSHPAPVICSPSVRTILAQWQEQGMPSDPFQQQATKLSKTMRQVRRRLASCRTVPEGMGPSELPGGIWSLNRRHEKPVPHATVPTEDDSEELLAGHHDLPAELQDQATAPHQAEQEDGFYIKVEFEKFCDGSVKDLSLPNSPQRLNPCCRAPLVLWAGIDQEETKKQRQNEYLRCKRLFMNVEREQVKEQRRQKEQQKRIAKIKSKKENQRQVEEQRMQKMAEQQEPCLGESVCEILAHLELEERRLKKIKEKQQRNMEYVRYVEALRAEMREKMKLYNIDLPPLCSCSSDFWESHPDTCANNCVFYKNHKAYSHALQSVVLSCDPTDGRMKLPIHDLAALCTHPAKHQ
SIO_010081: CCDC15
subclass of: SO_0000673
so part of: CCDC15
location: join(284238..284387,286615..286764,287678..287866,288712..288828,292672..292827,295136..295255,297192..297295,299851..300030,300098..300246,301173..301288)
location: region:284238-301288:1
so has part: feature:284238-284387:1:exon
so has part: feature:286615-286764:1:exon
so has part: feature:287678-287866:1:exon
so has part: feature:288712-288828:1:exon
so has part: feature:292672-292827:1:exon
so has part: feature:295136-295255:1:exon
so has part: feature:297192-297295:1:exon
so has part: feature:299851-300030:1:exon
so has part: feature:300098-300246:1:exon
so has part: feature:301173-301288:1:exon

XP_027300035.2
type: Protein
SIO_000068: ncbiprotein

position:284238:1
position: 284238
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:301288:1
position: 301288
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:284238-284387:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:286615-286764:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:287678-287866:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:288712-288828:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:292672-292827:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:295136-295255:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:297192-297295:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:299851-300030:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:300098-300246:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:301173-301288:1:exon

SLC37A2
type: Gene
subclass of: SO_0000704
RO_0002162: 8839
gene: SLC37A2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 304339..312563
location: region:304339-312563:1
so has part: feature:304339-312563:1:exon
subclass of: SO_0000010

101797606
type: Gene
SIO_000068: ncbigene

position:304339:1
position: 304339
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:312563:1
position: 312563
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:304339-312563:1:exon

SLC37A2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8839
gene: SLC37A2
product: solute carrier family 37 member 2, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 11 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 80 samples with support for all annotated introns
transcript id: XM_027444230.2
SIO_010081: SLC37A2
subclass of: SO_0000673
so part of: SLC37A2
location: join(304339..304494,305822..305903,306002..306089,306433..306511,306644..306779,307019..307095,307172..307338,307728..307765,308065..308217,308300..308390,308478..308540,309030..309115,309855..309903,310240..310313,310639..310717,310833..310930,311057..311121,311340..311388,311880..311912,312350..312563)
location: region:304339-312563:1
so has part: feature:304339-304494:1:exon
so has part: feature:305822-305903:1:exon
so has part: feature:306002-306089:1:exon
so has part: feature:306433-306511:1:exon
so has part: feature:306644-306779:1:exon
so has part: feature:307019-307095:1:exon
so has part: feature:307172-307338:1:exon
so has part: feature:307728-307765:1:exon
so has part: feature:308065-308217:1:exon
so has part: feature:308300-308390:1:exon
so has part: feature:308478-308540:1:exon
so has part: feature:309030-309115:1:exon
so has part: feature:309855-309903:1:exon
so has part: feature:310240-310313:1:exon
so has part: feature:310639-310717:1:exon
so has part: feature:310833-310930:1:exon
so has part: feature:311057-311121:1:exon
so has part: feature:311340-311388:1:exon
so has part: feature:311880-311912:1:exon
so has part: feature:312350-312563:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:304339-304494:1:exon

position:304494:1
position: 304494
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:305822-305903:1:exon

position:305822:1
position: 305822
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:305903:1
position: 305903
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:306002-306089:1:exon

position:306002:1
position: 306002
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:306089:1
position: 306089
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:306433-306511:1:exon

position:306433:1
position: 306433
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:306511:1
position: 306511
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:306644-306779:1:exon

position:306644:1
position: 306644
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:306779:1
position: 306779
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:307019-307095:1:exon

position:307019:1
position: 307019
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:307095:1
position: 307095
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:307172-307338:1:exon

position:307172:1
position: 307172
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:307338:1
position: 307338
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:307728-307765:1:exon

position:307728:1
position: 307728
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:307765:1
position: 307765
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:308065-308217:1:exon

position:308065:1
position: 308065
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:308217:1
position: 308217
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:308300-308390:1:exon

position:308300:1
position: 308300
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:308390:1
position: 308390
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:308478-308540:1:exon

position:308478:1
position: 308478
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:308540:1
position: 308540
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:309030-309115:1:exon

position:309030:1
position: 309030
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:309115:1
position: 309115
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:309855-309903:1:exon

position:309855:1
position: 309855
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:309903:1
position: 309903
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:310240-310313:1:exon

position:310240:1
position: 310240
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:310313:1
position: 310313
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:310639-310717:1:exon

position:310639:1
position: 310639
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:310717:1
position: 310717
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:310833-310930:1:exon

position:310833:1
position: 310833
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:310930:1
position: 310930
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:311057-311121:1:exon

position:311057:1
position: 311057
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:311121:1
position: 311121
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:311340-311388:1:exon

position:311340:1
position: 311340
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:311388:1
position: 311388
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:311880-311912:1:exon

position:311880:1
position: 311880
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:311912:1
position: 311912
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:312350-312563:1:exon

position:312350:1
position: 312350
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

SLC37A2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8839
gene: SLC37A2
product: solute carrier family 37 member 2, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 11 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 105 samples with support for all annotated introns
transcript id: XM_027444231.2
SIO_010081: SLC37A2
subclass of: SO_0000673
so part of: SLC37A2
location: join(304339..304494,305822..305903,306002..306089,306433..306511,306644..306779,307019..307095,307172..307338,307728..307765,308065..308217,308300..308390,308478..308540,309030..309115,309855..309903,310240..310313,310639..310717,310833..310930,311057..311121,311340..311388,312350..312563)
location: region:304339-312563:1
so has part: feature:304339-304494:1:exon
so has part: feature:305822-305903:1:exon
so has part: feature:306002-306089:1:exon
so has part: feature:306433-306511:1:exon
so has part: feature:306644-306779:1:exon
so has part: feature:307019-307095:1:exon
so has part: feature:307172-307338:1:exon
so has part: feature:307728-307765:1:exon
so has part: feature:308065-308217:1:exon
so has part: feature:308300-308390:1:exon
so has part: feature:308478-308540:1:exon
so has part: feature:309030-309115:1:exon
so has part: feature:309855-309903:1:exon
so has part: feature:310240-310313:1:exon
so has part: feature:310639-310717:1:exon
so has part: feature:310833-310930:1:exon
so has part: feature:311057-311121:1:exon
so has part: feature:311340-311388:1:exon
so has part: feature:312350-312563:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:304339-304494:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:305822-305903:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:306002-306089:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:306433-306511:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:306644-306779:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:307019-307095:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:307172-307338:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:307728-307765:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:308065-308217:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:308300-308390:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:308478-308540:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:309030-309115:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:309855-309903:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:310240-310313:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:310639-310717:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:310833-310930:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:311057-311121:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:311340-311388:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:312350-312563:1:exon

SLC37A2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8839
gene: SLC37A2
product: solute carrier family 37 member 2, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 11 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 94 samples with support for all annotated introns
transcript id: XM_027444233.2
SIO_010081: SLC37A2
subclass of: SO_0000673
so part of: SLC37A2
location: join(304339..304494,305822..305903,306002..306089,306433..306511,306644..306779,307019..307095,307172..307338,307728..307765,308065..308217,308300..308390,308478..308540,309030..309115,309855..309903,310240..310313,310639..310717,310833..310930,311057..311121,311880..311912,312350..312563)
location: region:304339-312563:1
so has part: feature:304339-304494:1:exon
so has part: feature:305822-305903:1:exon
so has part: feature:306002-306089:1:exon
so has part: feature:306433-306511:1:exon
so has part: feature:306644-306779:1:exon
so has part: feature:307019-307095:1:exon
so has part: feature:307172-307338:1:exon
so has part: feature:307728-307765:1:exon
so has part: feature:308065-308217:1:exon
so has part: feature:308300-308390:1:exon
so has part: feature:308478-308540:1:exon
so has part: feature:309030-309115:1:exon
so has part: feature:309855-309903:1:exon
so has part: feature:310240-310313:1:exon
so has part: feature:310639-310717:1:exon
so has part: feature:310833-310930:1:exon
so has part: feature:311057-311121:1:exon
so has part: feature:311880-311912:1:exon
so has part: feature:312350-312563:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:304339-304494:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:305822-305903:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:306002-306089:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:306433-306511:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:306644-306779:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:307019-307095:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:307172-307338:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:307728-307765:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:308065-308217:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:308300-308390:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:308478-308540:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:309030-309115:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:309855-309903:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:310240-310313:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:310639-310717:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:310833-310930:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:311057-311121:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:311880-311912:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:312350-312563:1:exon

SLC37A2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8839
gene: SLC37A2
product: solute carrier family 37 member 2, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 11 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 124 samples with support for all annotated introns
transcript id: XM_027444232.2
SIO_010081: SLC37A2
subclass of: SO_0000673
so part of: SLC37A2
location: join(304339..304494,305822..305903,306002..306089,306433..306511,306644..306779,307019..307095,307172..307338,307728..307765,308065..308217,308300..308390,308478..308540,309030..309115,309855..309903,310240..310313,310639..310717,310833..310930,311057..311121,312350..312563)
location: region:304339-312563:1
so has part: feature:304339-304494:1:exon
so has part: feature:305822-305903:1:exon
so has part: feature:306002-306089:1:exon
so has part: feature:306433-306511:1:exon
so has part: feature:306644-306779:1:exon
so has part: feature:307019-307095:1:exon
so has part: feature:307172-307338:1:exon
so has part: feature:307728-307765:1:exon
so has part: feature:308065-308217:1:exon
so has part: feature:308300-308390:1:exon
so has part: feature:308478-308540:1:exon
so has part: feature:309030-309115:1:exon
so has part: feature:309855-309903:1:exon
so has part: feature:310240-310313:1:exon
so has part: feature:310639-310717:1:exon
so has part: feature:310833-310930:1:exon
so has part: feature:311057-311121:1:exon
so has part: feature:312350-312563:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:304339-304494:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:305822-305903:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:306002-306089:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:306433-306511:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:306644-306779:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:307019-307095:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:307172-307338:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:307728-307765:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:308065-308217:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:308300-308390:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:308478-308540:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:309030-309115:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:309855-309903:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:310240-310313:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:310639-310717:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:310833-310930:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:311057-311121:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:312350-312563:1:exon

SLC37A2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8839
gene: SLC37A2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: glucose-6-phosphate exchanger SLC37A2 isoform X2
translation: MRAALAPGVRLLRALPRDSRYRGLTLVLTFFCYTSYHLSRKPISIVKSQLHPNCSALGVNPHNGSNSTTWCSWAPFDQDNYKELFGALDNAFLVAYAIGMFISGIFGERLPLRYYLSGGMVLSGLFTALFGLGYFWDIHVLWYFIIMQVCNGLVQTTGWPSVVACVGNWFGKGKRGLIMGIWNSHTSVGNILGSLIAGIWVSSKWGLSFIVPGIIIAAVGVACFFFLVEHPDDVGCSPPLHHVMSEEKDPEGVTSDDGPLGTSGHSSTEHLESPKEPSEEPEAISFLGALRIPGVVEFSLCLLFAKLVSYTFLYWLPLYIVNVAHFGAKEAGDLSTLFDVGGILGGIFAGLISDYSGGRATTCCAMLVVAAPMLFLYNRIGQTGIGTSIAMLIVCGALVNGPYALITTAVSADLGTHESLKGNAKALSTVTAIIDGTGSVGAALGPLLAGLISPTGWNNVFYMLIAADVLACLLLARVVVKEVRGWCGYMARKRGFKQF
SIO_010081: SLC37A2
subclass of: SO_0000673
so part of: SLC37A2
location: join(304436..304494,305822..305903,306002..306089,306433..306511,306644..306779,307019..307095,307172..307338,307728..307765,308065..308217,308300..308390,308478..308540,309030..309115,309855..309903,310240..310313,310639..310717,310833..310930,311057..311121,312350..312365)
location: region:304436-312365:1
so has part: feature:304436-304494:1:exon
so has part: feature:305822-305903:1:exon
so has part: feature:306002-306089:1:exon
so has part: feature:306433-306511:1:exon
so has part: feature:306644-306779:1:exon
so has part: feature:307019-307095:1:exon
so has part: feature:307172-307338:1:exon
so has part: feature:307728-307765:1:exon
so has part: feature:308065-308217:1:exon
so has part: feature:308300-308390:1:exon
so has part: feature:308478-308540:1:exon
so has part: feature:309030-309115:1:exon
so has part: feature:309855-309903:1:exon
so has part: feature:310240-310313:1:exon
so has part: feature:310639-310717:1:exon
so has part: feature:310833-310930:1:exon
so has part: feature:311057-311121:1:exon
so has part: feature:312350-312365:1:exon

XP_027300033.1
type: Protein
SIO_000068: ncbiprotein

position:304436:1
position: 304436
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:312365:1
position: 312365
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:304436-304494:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:305822-305903:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:306002-306089:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:306433-306511:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:306644-306779:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:307019-307095:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:307172-307338:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:307728-307765:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:308065-308217:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:308300-308390:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:308478-308540:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:309030-309115:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:309855-309903:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:310240-310313:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:310639-310717:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:310833-310930:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:311057-311121:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:312350-312365:1:exon

SLC37A2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8839
gene: SLC37A2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: glucose-6-phosphate exchanger SLC37A2 isoform X3
translation: MRAALAPGVRLLRALPRDSRYRGLTLVLTFFCYTSYHLSRKPISIVKSQLHPNCSALGVNPHNGSNSTTWCSWAPFDQDNYKELFGALDNAFLVAYAIGMFISGIFGERLPLRYYLSGGMVLSGLFTALFGLGYFWDIHVLWYFIIMQVCNGLVQTTGWPSVVACVGNWFGKGKRGLIMGIWNSHTSVGNILGSLIAGIWVSSKWGLSFIVPGIIIAAVGVACFFFLVEHPDDVGCSPPLHHVMSEEKDPEGVTSDDGPLGTSGHSSTEHLESPKEPSEEPEAISFLGALRIPGVVEFSLCLLFAKLVSYTFLYWLPLYIVNVAHFGAKEAGDLSTLFDVGGILGGIFAGLISDYSGGRATTCCAMLVVAAPMLFLYNRIGQTGIGTSIAMLIVCGALVNGPYALITTAVSADLGTHESLKGNAKALSTVTAIIDGTGSVGAALGPLLAGLISPTGWNNVFYMLIAADVLACLLLARVVVKEVRGWCGYMARKRG
SIO_010081: SLC37A2
subclass of: SO_0000673
so part of: SLC37A2
location: join(304436..304494,305822..305903,306002..306089,306433..306511,306644..306779,307019..307095,307172..307338,307728..307765,308065..308217,308300..308390,308478..308540,309030..309115,309855..309903,310240..310313,310639..310717,310833..310930,311057..311121,311880..311883)
location: region:304436-311883:1
so has part: feature:304436-304494:1:exon
so has part: feature:305822-305903:1:exon
so has part: feature:306002-306089:1:exon
so has part: feature:306433-306511:1:exon
so has part: feature:306644-306779:1:exon
so has part: feature:307019-307095:1:exon
so has part: feature:307172-307338:1:exon
so has part: feature:307728-307765:1:exon
so has part: feature:308065-308217:1:exon
so has part: feature:308300-308390:1:exon
so has part: feature:308478-308540:1:exon
so has part: feature:309030-309115:1:exon
so has part: feature:309855-309903:1:exon
so has part: feature:310240-310313:1:exon
so has part: feature:310639-310717:1:exon
so has part: feature:310833-310930:1:exon
so has part: feature:311057-311121:1:exon
so has part: feature:311880-311883:1:exon

XP_027300034.1
type: Protein
SIO_000068: ncbiprotein

position:311883:1
position: 311883
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:304436-304494:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:305822-305903:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:306002-306089:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:306433-306511:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:306644-306779:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:307019-307095:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:307172-307338:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:307728-307765:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:308065-308217:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:308300-308390:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:308478-308540:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:309030-309115:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:309855-309903:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:310240-310313:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:310639-310717:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:310833-310930:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:311057-311121:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:311880-311883:1:exon

SLC37A2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8839
gene: SLC37A2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: glucose-6-phosphate exchanger SLC37A2 isoform X1
translation: MRAALAPGVRLLRALPRDSRYRGLTLVLTFFCYTSYHLSRKPISIVKSQLHPNCSALGVNPHNGSNSTTWCSWAPFDQDNYKELFGALDNAFLVAYAIGMFISGIFGERLPLRYYLSGGMVLSGLFTALFGLGYFWDIHVLWYFIIMQVCNGLVQTTGWPSVVACVGNWFGKGKRGLIMGIWNSHTSVGNILGSLIAGIWVSSKWGLSFIVPGIIIAAVGVACFFFLVEHPDDVGCSPPLHHVMSEEKDPEGVTSDDGPLGTSGHSSTEHLESPKEPSEEPEAISFLGALRIPGVVEFSLCLLFAKLVSYTFLYWLPLYIVNVAHFGAKEAGDLSTLFDVGGILGGIFAGLISDYSGGRATTCCAMLVVAAPMLFLYNRIGQTGIGTSIAMLIVCGALVNGPYALITTAVSADLGTHESLKGNAKALSTVTAIIDGTGSVGAALGPLLAGLISPTGWNNVFYMLIAADVLACLLLARVVVKEVRGWCGYMARKRGSSVQLTESVLDGK
SIO_010081: SLC37A2
subclass of: SO_0000673
so part of: SLC37A2
location: join(304436..304494,305822..305903,306002..306089,306433..306511,306644..306779,307019..307095,307172..307338,307728..307765,308065..308217,308300..308390,308478..308540,309030..309115,309855..309903,310240..310313,310639..310717,310833..310930,311057..311121,311340..311382)
location: region:304436-311382:1
so has part: feature:304436-304494:1:exon
so has part: feature:305822-305903:1:exon
so has part: feature:306002-306089:1:exon
so has part: feature:306433-306511:1:exon
so has part: feature:306644-306779:1:exon
so has part: feature:307019-307095:1:exon
so has part: feature:307172-307338:1:exon
so has part: feature:307728-307765:1:exon
so has part: feature:308065-308217:1:exon
so has part: feature:308300-308390:1:exon
so has part: feature:308478-308540:1:exon
so has part: feature:309030-309115:1:exon
so has part: feature:309855-309903:1:exon
so has part: feature:310240-310313:1:exon
so has part: feature:310639-310717:1:exon
so has part: feature:310833-310930:1:exon
so has part: feature:311057-311121:1:exon
so has part: feature:311340-311382:1:exon

XP_027300031.1
type: Protein
SIO_000068: ncbiprotein

position:311382:1
position: 311382
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:304436-304494:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:305822-305903:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:306002-306089:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:306433-306511:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:306644-306779:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:307019-307095:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:307172-307338:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:307728-307765:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:308065-308217:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:308300-308390:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:308478-308540:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:309030-309115:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:309855-309903:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:310240-310313:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:310639-310717:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:310833-310930:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:311057-311121:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:311340-311382:1:exon

SLC37A2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8839
gene: SLC37A2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: glucose-6-phosphate exchanger SLC37A2 isoform X1
translation: MRAALAPGVRLLRALPRDSRYRGLTLVLTFFCYTSYHLSRKPISIVKSQLHPNCSALGVNPHNGSNSTTWCSWAPFDQDNYKELFGALDNAFLVAYAIGMFISGIFGERLPLRYYLSGGMVLSGLFTALFGLGYFWDIHVLWYFIIMQVCNGLVQTTGWPSVVACVGNWFGKGKRGLIMGIWNSHTSVGNILGSLIAGIWVSSKWGLSFIVPGIIIAAVGVACFFFLVEHPDDVGCSPPLHHVMSEEKDPEGVTSDDGPLGTSGHSSTEHLESPKEPSEEPEAISFLGALRIPGVVEFSLCLLFAKLVSYTFLYWLPLYIVNVAHFGAKEAGDLSTLFDVGGILGGIFAGLISDYSGGRATTCCAMLVVAAPMLFLYNRIGQTGIGTSIAMLIVCGALVNGPYALITTAVSADLGTHESLKGNAKALSTVTAIIDGTGSVGAALGPLLAGLISPTGWNNVFYMLIAADVLACLLLARVVVKEVRGWCGYMARKRGSSVQLTESVLDGK
SIO_010081: SLC37A2
subclass of: SO_0000673
so part of: SLC37A2
location: join(304436..304494,305822..305903,306002..306089,306433..306511,306644..306779,307019..307095,307172..307338,307728..307765,308065..308217,308300..308390,308478..308540,309030..309115,309855..309903,310240..310313,310639..310717,310833..310930,311057..311121,311340..311382)
location: region:304436-311382:1
so has part: feature:304436-304494:1:exon
so has part: feature:305822-305903:1:exon
so has part: feature:306002-306089:1:exon
so has part: feature:306433-306511:1:exon
so has part: feature:306644-306779:1:exon
so has part: feature:307019-307095:1:exon
so has part: feature:307172-307338:1:exon
so has part: feature:307728-307765:1:exon
so has part: feature:308065-308217:1:exon
so has part: feature:308300-308390:1:exon
so has part: feature:308478-308540:1:exon
so has part: feature:309030-309115:1:exon
so has part: feature:309855-309903:1:exon
so has part: feature:310240-310313:1:exon
so has part: feature:310639-310717:1:exon
so has part: feature:310833-310930:1:exon
so has part: feature:311057-311121:1:exon
so has part: feature:311340-311382:1:exon

XP_027300032.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:304436-304494:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:305822-305903:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:306002-306089:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:306433-306511:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:306644-306779:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:307019-307095:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:307172-307338:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:307728-307765:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:308065-308217:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:308300-308390:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:308478-308540:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:309030-309115:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:309855-309903:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:310240-310313:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:310639-310717:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:310833-310930:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:311057-311121:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:311340-311382:1:exon

TMEM218
type: Gene
subclass of: SO_0000704
RO_0002162: 8839
gene: TMEM218
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(317064..319140)
location: region:317064-319140:-1
so has part: feature:317064-319140:-1:exon
subclass of: SO_0000010

110352996
type: Gene
SIO_000068: ncbigene

position:317064:-1
position: 317064
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:319140:-1
position: 319140
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:317064-319140:-1:exon

TMEM218
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8839
gene: TMEM218
product: transmembrane protein 218, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 12 samples with support for all annotated introns
transcript id: XM_027444419.2
SIO_010081: TMEM218
subclass of: SO_0000673
so part of: TMEM218
location: complement(join(317064..317385,317556..317692,318575..318695,318774..319140))
location: region:317064-319140:-1
so has part: feature:318774-319140:-1:exon
so has part: feature:318575-318695:-1:exon
so has part: feature:317556-317692:-1:exon
so has part: feature:317064-317385:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:318774-319140:-1:exon

position:318774:-1
position: 318774
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:318575-318695:-1:exon

position:318575:-1
position: 318575
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:318695:-1
position: 318695
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:317556-317692:-1:exon

position:317556:-1
position: 317556
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:317692:-1
position: 317692
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:317064-317385:-1:exon

position:317385:-1
position: 317385
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

TMEM218
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8839
gene: TMEM218
product: transmembrane protein 218, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 13 samples with support for all annotated introns
transcript id: XM_027444420.2
SIO_010081: TMEM218
subclass of: SO_0000673
so part of: TMEM218
location: complement(join(317064..317467,317556..317692,318575..318695,318774..319136))
location: region:317064-319136:-1
so has part: feature:318774-319136:-1:exon
so has part: feature:318575-318695:-1:exon
so has part: feature:317556-317692:-1:exon
so has part: feature:317064-317467:-1:exon

position:319136:-1
position: 319136
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:318774-319136:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:318575-318695:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:317556-317692:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:317064-317467:-1:exon

position:317467:-1
position: 317467
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

TMEM218
type: Miscellaneous RNA
subclass of: SO_0000673
RO_0002162: 8839
gene: TMEM218
product: transmembrane protein 218, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 6 samples with support for all annotated introns
transcript id: XR_005260907.1
SIO_010081: TMEM218
so part of: TMEM218
location: complement(join(317064..317385,317467..317692,318575..318695,318774..319135))
location: region:317064-319135:-1
so has part: feature:318774-319135:-1:exon
so has part: feature:318575-318695:-1:exon
so has part: feature:317467-317692:-1:exon
so has part: feature:317064-317385:-1:exon

position:319135:-1
position: 319135
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:318774-319135:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:318575-318695:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:317467-317692:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:317064-317385:-1:exon

TMEM218
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8839
gene: TMEM218
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: transmembrane protein 218 isoform X1
translation: MIYSPQHQALLDCEHPSPDSRCPPPSCTKCPSEGPQPPGSRQGPAAAPPRPLPQPMASVGSAAGGCRLAERRAVARQKRRWGSMAGPLLGAGPGALLLAALWALALLLCLALARAPGAARLAALPVPLGAALLSAALLLYPREEEEEEEEEGAGPPPGTEIVDTFFISRLILLAVMALVFLGCLFLLLLHHLAEPVYAKPLRRSWSLNGETRKVKRTELRDPARFCLNNGFVRPGVVLVNTF
SIO_010081: TMEM218
subclass of: SO_0000673
so part of: TMEM218
location: complement(join(317274..317385,317556..317692,318575..318695,318774..319132))
location: region:317274-319132:-1
so has part: feature:318774-319132:-1:exon
so has part: feature:318575-318695:-1:exon
so has part: feature:317556-317692:-1:exon
so has part: feature:317274-317385:-1:exon

XP_027300220.2
type: Protein
SIO_000068: ncbiprotein

position:317274:-1
position: 317274
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:319132:-1
position: 319132
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:318774-319132:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:318575-318695:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:317556-317692:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:317274-317385:-1:exon

TMEM218
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8839
gene: TMEM218
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: transmembrane protein 218 isoform X2
translation: MIYSPQHQALLDCEHPSPDSRCPPPSCTKCPSEGPQPPGSRQGPAAAPPRPLPQPMASVGSAAGGCRLAERRAVARQKRRWGSMAGPLLGAGPGALLLAALWALALLLCLALARAPGAARLAALPVPLGAALLSAALLLYPREEEEEEEEEGAGPPPGTEIVDTFFISRLILLAVMALVFLGCLFLLLLHHLAEPVYAKPLRRSWRVG
SIO_010081: TMEM218
subclass of: SO_0000673
so part of: TMEM218
location: complement(join(317458..317467,317556..317692,318575..318695,318774..319132))
location: region:317458-319132:-1
so has part: feature:318774-319132:-1:exon
so has part: feature:318575-318695:-1:exon
so has part: feature:317556-317692:-1:exon
so has part: feature:317458-317467:-1:exon

XP_027300221.2
type: Protein
SIO_000068: ncbiprotein

position:317458:-1
position: 317458
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:318774-319132:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:318575-318695:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:317556-317692:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:317458-317467:-1:exon

PKNOX2
type: Gene
subclass of: SO_0000704
RO_0002162: 8839
gene: PKNOX2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 326083..413185
location: region:326083-413185:1
so has part: feature:326083-413185:1:exon
subclass of: SO_0000010

101790146
type: Gene
SIO_000068: ncbigene

position:326083:1
position: 326083
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:413185:1
position: 413185
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:326083-413185:1:exon

PKNOX2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8839
gene: PKNOX2
product: PBX/knotted 1 homeobox 2, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 108 samples with support for all annotated introns
transcript id: XM_027444415.2
SIO_010081: PKNOX2
subclass of: SO_0000673
so part of: PKNOX2
location: join(326083..326218,328531..328673,376370..376451,383704..383804,384774..384882,390136..390275,394526..394697,398458..398646,404906..405038,405113..405210,406895..407014,409208..409284,409755..409933,411552..413185)
location: region:326083-413185:1
so has part: feature:326083-326218:1:exon
so has part: feature:328531-328673:1:exon
so has part: feature:376370-376451:1:exon
so has part: feature:383704-383804:1:exon
so has part: feature:384774-384882:1:exon
so has part: feature:390136-390275:1:exon
so has part: feature:394526-394697:1:exon
so has part: feature:398458-398646:1:exon
so has part: feature:404906-405038:1:exon
so has part: feature:405113-405210:1:exon
so has part: feature:406895-407014:1:exon
so has part: feature:409208-409284:1:exon
so has part: feature:409755-409933:1:exon
so has part: feature:411552-413185:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:326083-326218:1:exon

position:326218:1
position: 326218
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:328531-328673:1:exon

position:328531:1
position: 328531
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:328673:1
position: 328673
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:376370-376451:1:exon

position:376370:1
position: 376370
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:376451:1
position: 376451
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:383704-383804:1:exon

position:383704:1
position: 383704
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:383804:1
position: 383804
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:384774-384882:1:exon

position:384774:1
position: 384774
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:384882:1
position: 384882
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:390136-390275:1:exon

position:390136:1
position: 390136
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:390275:1
position: 390275
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:394526-394697:1:exon

position:394526:1
position: 394526
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:394697:1
position: 394697
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:398458-398646:1:exon

position:398458:1
position: 398458
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:398646:1
position: 398646
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:404906-405038:1:exon

position:404906:1
position: 404906
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:405038:1
position: 405038
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:405113-405210:1:exon

position:405113:1
position: 405113
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:405210:1
position: 405210
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:406895-407014:1:exon

position:406895:1
position: 406895
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:407014:1
position: 407014
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:409208-409284:1:exon

position:409208:1
position: 409208
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:409284:1
position: 409284
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:409755-409933:1:exon

position:409755:1
position: 409755
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:409933:1
position: 409933
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:411552-413185:1:exon

position:411552:1
position: 411552
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

PKNOX2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8839
gene: PKNOX2
product: PBX/knotted 1 homeobox 2, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 124 samples with support for all annotated introns
transcript id: XM_027444411.2
SIO_010081: PKNOX2
subclass of: SO_0000673
so part of: PKNOX2
location: join(326083..326218,328531..328673,376370..376451,384774..384882,390136..390275,394526..394697,398458..398646,404906..405038,405113..405210,406895..407014,409208..409284,409755..409933,411552..413185)
location: region:326083-413185:1
so has part: feature:326083-326218:1:exon
so has part: feature:328531-328673:1:exon
so has part: feature:376370-376451:1:exon
so has part: feature:384774-384882:1:exon
so has part: feature:390136-390275:1:exon
so has part: feature:394526-394697:1:exon
so has part: feature:398458-398646:1:exon
so has part: feature:404906-405038:1:exon
so has part: feature:405113-405210:1:exon
so has part: feature:406895-407014:1:exon
so has part: feature:409208-409284:1:exon
so has part: feature:409755-409933:1:exon
so has part: feature:411552-413185:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:326083-326218:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:328531-328673:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:376370-376451:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:384774-384882:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:390136-390275:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:394526-394697:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:398458-398646:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:404906-405038:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:405113-405210:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:406895-407014:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:409208-409284:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:409755-409933:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:411552-413185:1:exon

PKNOX2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8839
gene: PKNOX2
product: PBX/knotted 1 homeobox 2, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 57 samples with support for all annotated introns
transcript id: XM_027444413.2
SIO_010081: PKNOX2
subclass of: SO_0000673
so part of: PKNOX2
location: join(327190..327373,328531..328673,376370..376451,384774..384882,390136..390275,394526..394697,398458..398646,404906..405038,405113..405210,406895..407014,409208..409284,409755..409933,411552..413185)
location: region:327190-413185:1
so has part: feature:327190-327373:1:exon
so has part: feature:328531-328673:1:exon
so has part: feature:376370-376451:1:exon
so has part: feature:384774-384882:1:exon
so has part: feature:390136-390275:1:exon
so has part: feature:394526-394697:1:exon
so has part: feature:398458-398646:1:exon
so has part: feature:404906-405038:1:exon
so has part: feature:405113-405210:1:exon
so has part: feature:406895-407014:1:exon
so has part: feature:409208-409284:1:exon
so has part: feature:409755-409933:1:exon
so has part: feature:411552-413185:1:exon

position:327190:1
position: 327190
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:327190-327373:1:exon

position:327373:1
position: 327373
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:328531-328673:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:376370-376451:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:384774-384882:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:390136-390275:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:394526-394697:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:398458-398646:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:404906-405038:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:405113-405210:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:406895-407014:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:409208-409284:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:409755-409933:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:411552-413185:1:exon

LOC110352737
type: Gene
subclass of: SO_0000704
RO_0002162: 8839
gene: LOC110352737
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(368479..370325)
location: region:368479-370325:-1
so has part: feature:368479-370325:-1:exon
subclass of: SO_0000011

110352737
type: Gene
SIO_000068: ncbigene

position:368479:-1
position: 368479
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:370325:-1
position: 370325
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:368479-370325:-1:exon

LOC110352737
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 8839
nc RNA class: lncRNA
gene: LOC110352737
product: uncharacterized LOC110352737
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 14 samples with support for all annotated introns
transcript id: XR_002402222.3
SIO_010081: LOC110352737
subclass of: SO_0000673
so part of: LOC110352737
location: complement(join(368479..369719,370003..370325))
location: region:368479-370325:-1
so has part: feature:370003-370325:-1:exon
so has part: feature:368479-369719:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:370003-370325:-1:exon

position:370003:-1
position: 370003
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:368479-369719:-1:exon

position:369719:-1
position: 369719
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

PKNOX2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8839
gene: PKNOX2
product: PBX/knotted 1 homeobox 2, transcript variant X5
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 50 samples with support for all annotated introns
transcript id: XM_038167533.1
SIO_010081: PKNOX2
subclass of: SO_0000673
so part of: PKNOX2
location: join(372549..372653,376370..376451,383704..383804,384774..384882,390136..390275,394526..394697,398458..398646,404906..405038,405113..405210,406895..407014,409208..409284,409755..409933,411552..413185)
location: region:372549-413185:1
so has part: feature:372549-372653:1:exon
so has part: feature:376370-376451:1:exon
so has part: feature:383704-383804:1:exon
so has part: feature:384774-384882:1:exon
so has part: feature:390136-390275:1:exon
so has part: feature:394526-394697:1:exon
so has part: feature:398458-398646:1:exon
so has part: feature:404906-405038:1:exon
so has part: feature:405113-405210:1:exon
so has part: feature:406895-407014:1:exon
so has part: feature:409208-409284:1:exon
so has part: feature:409755-409933:1:exon
so has part: feature:411552-413185:1:exon

position:372549:1
position: 372549
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:372549-372653:1:exon

position:372653:1
position: 372653
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:376370-376451:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:383704-383804:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:384774-384882:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:390136-390275:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:394526-394697:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:398458-398646:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:404906-405038:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:405113-405210:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:406895-407014:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:409208-409284:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:409755-409933:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:411552-413185:1:exon

PKNOX2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8839
gene: PKNOX2
product: PBX/knotted 1 homeobox 2, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 53 samples with support for all annotated introns
transcript id: XM_038167532.1
SIO_010081: PKNOX2
subclass of: SO_0000673
so part of: PKNOX2
location: join(372549..372653,376370..376451,384774..384882,390136..390275,394526..394697,398458..398646,404906..405038,405113..405210,406895..407014,409208..409284,409755..409933,411552..413185)
location: region:372549-413185:1
so has part: feature:372549-372653:1:exon
so has part: feature:376370-376451:1:exon
so has part: feature:384774-384882:1:exon
so has part: feature:390136-390275:1:exon
so has part: feature:394526-394697:1:exon
so has part: feature:398458-398646:1:exon
so has part: feature:404906-405038:1:exon
so has part: feature:405113-405210:1:exon
so has part: feature:406895-407014:1:exon
so has part: feature:409208-409284:1:exon
so has part: feature:409755-409933:1:exon
so has part: feature:411552-413185:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:372549-372653:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:376370-376451:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:384774-384882:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:390136-390275:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:394526-394697:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:398458-398646:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:404906-405038:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:405113-405210:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:406895-407014:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:409208-409284:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:409755-409933:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:411552-413185:1:exon

PKNOX2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8839
gene: PKNOX2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: homeobox protein PKNOX2
translation: MHHVSPAPALTMMATQTVPPPPYQDTPQMTATAQQPTKAQPVHLTTTPAATNTPVPTAAGDPQAQLEADKRAVYRHPLFPLLTLLFEKCEQATQGSECITSASFDVDIENFVHQQEQEHKPFFSDDPELDNLMVKAIQVLRIHLLELEKVNELCKDFCNRYITCLKTKMHSDNLLRNDLGGPYSPNPSSISLHPQEMLQSSPAALPAASNPPPGIVVPAAALPPGNLAMGAGSGSPAVPGGALYQPVTMVTSQGQVLTQAIAPGALQIPNAQVNLDLTSLLDGEDKKSKNKRGVLPKHATNIMRSWLFQHLMHPYPTEDEKRQIAAQTNLTLLQVNNWFINARRRILQPMLDASNPDPAPKAKKIKSQHRPTQRFWPNSIAAGVLQQQGGNSGTNPDGSVGMDNLQPLSSATATMAMQQAMLAVHDDSLDGTEEEEEDEEEDEDEMEEEEEEEEELEEEPGGLPAAPGTDLGLDHSDSLE
SIO_010081: PKNOX2
subclass of: SO_0000673
so part of: PKNOX2
location: join(384799..384882,390136..390275,394526..394697,398458..398646,404906..405038,405113..405210,406895..407014,409208..409284,409755..409933,411552..411802)
location: region:384799-411802:1
so has part: feature:384799-384882:1:exon
so has part: feature:390136-390275:1:exon
so has part: feature:394526-394697:1:exon
so has part: feature:398458-398646:1:exon
so has part: feature:404906-405038:1:exon
so has part: feature:405113-405210:1:exon
so has part: feature:406895-407014:1:exon
so has part: feature:409208-409284:1:exon
so has part: feature:409755-409933:1:exon
so has part: feature:411552-411802:1:exon

XP_027300212.1
type: Protein
SIO_000068: ncbiprotein

position:384799:1
position: 384799
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:411802:1
position: 411802
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:384799-384882:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:390136-390275:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:394526-394697:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:398458-398646:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:404906-405038:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:405113-405210:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:406895-407014:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:409208-409284:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:409755-409933:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:411552-411802:1:exon

PKNOX2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8839
gene: PKNOX2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: homeobox protein PKNOX2
translation: MHHVSPAPALTMMATQTVPPPPYQDTPQMTATAQQPTKAQPVHLTTTPAATNTPVPTAAGDPQAQLEADKRAVYRHPLFPLLTLLFEKCEQATQGSECITSASFDVDIENFVHQQEQEHKPFFSDDPELDNLMVKAIQVLRIHLLELEKVNELCKDFCNRYITCLKTKMHSDNLLRNDLGGPYSPNPSSISLHPQEMLQSSPAALPAASNPPPGIVVPAAALPPGNLAMGAGSGSPAVPGGALYQPVTMVTSQGQVLTQAIAPGALQIPNAQVNLDLTSLLDGEDKKSKNKRGVLPKHATNIMRSWLFQHLMHPYPTEDEKRQIAAQTNLTLLQVNNWFINARRRILQPMLDASNPDPAPKAKKIKSQHRPTQRFWPNSIAAGVLQQQGGNSGTNPDGSVGMDNLQPLSSATATMAMQQAMLAVHDDSLDGTEEEEEDEEEDEDEMEEEEEEEEELEEEPGGLPAAPGTDLGLDHSDSLE
SIO_010081: PKNOX2
subclass of: SO_0000673
so part of: PKNOX2
location: join(384799..384882,390136..390275,394526..394697,398458..398646,404906..405038,405113..405210,406895..407014,409208..409284,409755..409933,411552..411802)
location: region:384799-411802:1
so has part: feature:384799-384882:1:exon
so has part: feature:390136-390275:1:exon
so has part: feature:394526-394697:1:exon
so has part: feature:398458-398646:1:exon
so has part: feature:404906-405038:1:exon
so has part: feature:405113-405210:1:exon
so has part: feature:406895-407014:1:exon
so has part: feature:409208-409284:1:exon
so has part: feature:409755-409933:1:exon
so has part: feature:411552-411802:1:exon

XP_027300214.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:384799-384882:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:390136-390275:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:394526-394697:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:398458-398646:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:404906-405038:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:405113-405210:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:406895-407014:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:409208-409284:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:409755-409933:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:411552-411802:1:exon

PKNOX2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8839
gene: PKNOX2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: homeobox protein PKNOX2
translation: MHHVSPAPALTMMATQTVPPPPYQDTPQMTATAQQPTKAQPVHLTTTPAATNTPVPTAAGDPQAQLEADKRAVYRHPLFPLLTLLFEKCEQATQGSECITSASFDVDIENFVHQQEQEHKPFFSDDPELDNLMVKAIQVLRIHLLELEKVNELCKDFCNRYITCLKTKMHSDNLLRNDLGGPYSPNPSSISLHPQEMLQSSPAALPAASNPPPGIVVPAAALPPGNLAMGAGSGSPAVPGGALYQPVTMVTSQGQVLTQAIAPGALQIPNAQVNLDLTSLLDGEDKKSKNKRGVLPKHATNIMRSWLFQHLMHPYPTEDEKRQIAAQTNLTLLQVNNWFINARRRILQPMLDASNPDPAPKAKKIKSQHRPTQRFWPNSIAAGVLQQQGGNSGTNPDGSVGMDNLQPLSSATATMAMQQAMLAVHDDSLDGTEEEEEDEEEDEDEMEEEEEEEEELEEEPGGLPAAPGTDLGLDHSDSLE
SIO_010081: PKNOX2
subclass of: SO_0000673
so part of: PKNOX2
location: join(384799..384882,390136..390275,394526..394697,398458..398646,404906..405038,405113..405210,406895..407014,409208..409284,409755..409933,411552..411802)
location: region:384799-411802:1
so has part: feature:384799-384882:1:exon
so has part: feature:390136-390275:1:exon
so has part: feature:394526-394697:1:exon
so has part: feature:398458-398646:1:exon
so has part: feature:404906-405038:1:exon
so has part: feature:405113-405210:1:exon
so has part: feature:406895-407014:1:exon
so has part: feature:409208-409284:1:exon
so has part: feature:409755-409933:1:exon
so has part: feature:411552-411802:1:exon

XP_027300216.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:384799-384882:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:390136-390275:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:394526-394697:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:398458-398646:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:404906-405038:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:405113-405210:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:406895-407014:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:409208-409284:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:409755-409933:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:411552-411802:1:exon

PKNOX2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8839
gene: PKNOX2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: homeobox protein PKNOX2
translation: MHHVSPAPALTMMATQTVPPPPYQDTPQMTATAQQPTKAQPVHLTTTPAATNTPVPTAAGDPQAQLEADKRAVYRHPLFPLLTLLFEKCEQATQGSECITSASFDVDIENFVHQQEQEHKPFFSDDPELDNLMVKAIQVLRIHLLELEKVNELCKDFCNRYITCLKTKMHSDNLLRNDLGGPYSPNPSSISLHPQEMLQSSPAALPAASNPPPGIVVPAAALPPGNLAMGAGSGSPAVPGGALYQPVTMVTSQGQVLTQAIAPGALQIPNAQVNLDLTSLLDGEDKKSKNKRGVLPKHATNIMRSWLFQHLMHPYPTEDEKRQIAAQTNLTLLQVNNWFINARRRILQPMLDASNPDPAPKAKKIKSQHRPTQRFWPNSIAAGVLQQQGGNSGTNPDGSVGMDNLQPLSSATATMAMQQAMLAVHDDSLDGTEEEEEDEEEDEDEMEEEEEEEEELEEEPGGLPAAPGTDLGLDHSDSLE
SIO_010081: PKNOX2
subclass of: SO_0000673
so part of: PKNOX2
location: join(384799..384882,390136..390275,394526..394697,398458..398646,404906..405038,405113..405210,406895..407014,409208..409284,409755..409933,411552..411802)
location: region:384799-411802:1
so has part: feature:384799-384882:1:exon
so has part: feature:390136-390275:1:exon
so has part: feature:394526-394697:1:exon
so has part: feature:398458-398646:1:exon
so has part: feature:404906-405038:1:exon
so has part: feature:405113-405210:1:exon
so has part: feature:406895-407014:1:exon
so has part: feature:409208-409284:1:exon
so has part: feature:409755-409933:1:exon
so has part: feature:411552-411802:1:exon

XP_038023460.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:384799-384882:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:390136-390275:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:394526-394697:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:398458-398646:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:404906-405038:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:405113-405210:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:406895-407014:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:409208-409284:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:409755-409933:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:411552-411802:1:exon

PKNOX2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8839
gene: PKNOX2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: homeobox protein PKNOX2
translation: MHHVSPAPALTMMATQTVPPPPYQDTPQMTATAQQPTKAQPVHLTTTPAATNTPVPTAAGDPQAQLEADKRAVYRHPLFPLLTLLFEKCEQATQGSECITSASFDVDIENFVHQQEQEHKPFFSDDPELDNLMVKAIQVLRIHLLELEKVNELCKDFCNRYITCLKTKMHSDNLLRNDLGGPYSPNPSSISLHPQEMLQSSPAALPAASNPPPGIVVPAAALPPGNLAMGAGSGSPAVPGGALYQPVTMVTSQGQVLTQAIAPGALQIPNAQVNLDLTSLLDGEDKKSKNKRGVLPKHATNIMRSWLFQHLMHPYPTEDEKRQIAAQTNLTLLQVNNWFINARRRILQPMLDASNPDPAPKAKKIKSQHRPTQRFWPNSIAAGVLQQQGGNSGTNPDGSVGMDNLQPLSSATATMAMQQAMLAVHDDSLDGTEEEEEDEEEDEDEMEEEEEEEEELEEEPGGLPAAPGTDLGLDHSDSLE
SIO_010081: PKNOX2
subclass of: SO_0000673
so part of: PKNOX2
location: join(384799..384882,390136..390275,394526..394697,398458..398646,404906..405038,405113..405210,406895..407014,409208..409284,409755..409933,411552..411802)
location: region:384799-411802:1
so has part: feature:384799-384882:1:exon
so has part: feature:390136-390275:1:exon
so has part: feature:394526-394697:1:exon
so has part: feature:398458-398646:1:exon
so has part: feature:404906-405038:1:exon
so has part: feature:405113-405210:1:exon
so has part: feature:406895-407014:1:exon
so has part: feature:409208-409284:1:exon
so has part: feature:409755-409933:1:exon
so has part: feature:411552-411802:1:exon

XP_038023461.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:384799-384882:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:390136-390275:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:394526-394697:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:398458-398646:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:404906-405038:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:405113-405210:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:406895-407014:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:409208-409284:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:409755-409933:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:411552-411802:1:exon

FEZ1
type: Gene
subclass of: SO_0000704
RO_0002162: 8839
gene: FEZ1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(414250..428872)
location: region:414250-428872:-1
so has part: feature:414250-428872:-1:exon
subclass of: SO_0000010

101798807
type: Gene
SIO_000068: ncbigene

position:414250:-1
position: 414250
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:428872:-1
position: 428872
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:414250-428872:-1:exon

FEZ1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8839
gene: FEZ1
product: fasciculation and elongation protein zeta 1, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 45 samples with support for all annotated introns
transcript id: XM_027444418.2
SIO_010081: FEZ1
subclass of: SO_0000673
so part of: FEZ1
location: complement(join(414250..414307,415276..415341,416115..416190,417628..417899,419416..419611,420233..420322,421612..421708,425617..425911,428742..428872))
location: region:414250-428872:-1
so has part: feature:428742-428872:-1:exon
so has part: feature:425617-425911:-1:exon
so has part: feature:421612-421708:-1:exon
so has part: feature:420233-420322:-1:exon
so has part: feature:419416-419611:-1:exon
so has part: feature:417628-417899:-1:exon
so has part: feature:416115-416190:-1:exon
so has part: feature:415276-415341:-1:exon
so has part: feature:414250-414307:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:428742-428872:-1:exon

position:428742:-1
position: 428742
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:425617-425911:-1:exon

position:425617:-1
position: 425617
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:425911:-1
position: 425911
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:421612-421708:-1:exon

position:421612:-1
position: 421612
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:421708:-1
position: 421708
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:420233-420322:-1:exon

position:420233:-1
position: 420233
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:420322:-1
position: 420322
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:419416-419611:-1:exon

position:419416:-1
position: 419416
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:419611:-1
position: 419611
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:417628-417899:-1:exon

position:417628:-1
position: 417628
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:417899:-1
position: 417899
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:416115-416190:-1:exon

position:416115:-1
position: 416115
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:416190:-1
position: 416190
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:415276-415341:-1:exon

position:415276:-1
position: 415276
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:415341:-1
position: 415341
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:414250-414307:-1:exon

position:414307:-1
position: 414307
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

FEZ1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8839
gene: FEZ1
product: fasciculation and elongation protein zeta 1, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 119 samples with support for all annotated introns
transcript id: XM_027444417.2
SIO_010081: FEZ1
subclass of: SO_0000673
so part of: FEZ1
location: complement(join(414250..414307,415276..415341,416115..416190,416595..416675,417628..417899,419416..419611,420233..420322,421612..421708,425617..425911,428742..428872))
location: region:414250-428872:-1
so has part: feature:428742-428872:-1:exon
so has part: feature:425617-425911:-1:exon
so has part: feature:421612-421708:-1:exon
so has part: feature:420233-420322:-1:exon
so has part: feature:419416-419611:-1:exon
so has part: feature:417628-417899:-1:exon
so has part: feature:416595-416675:-1:exon
so has part: feature:416115-416190:-1:exon
so has part: feature:415276-415341:-1:exon
so has part: feature:414250-414307:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:428742-428872:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:425617-425911:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:421612-421708:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:420233-420322:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:419416-419611:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:417628-417899:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:416595-416675:-1:exon

position:416595:-1
position: 416595
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:416675:-1
position: 416675
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:416115-416190:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:415276-415341:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:414250-414307:-1:exon

FEZ1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8839
gene: FEZ1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: fasciculation and elongation protein zeta-1 isoform X2
translation: MEAPLVSLEEEFEEGPGDDGGTPRRTADPALAELESFSAEMMSFKSMEDLVQEFDEKLTVCFRNYDAATEGLAPVRGRLQAQEEEERLQDEEVWDALTDGFAPRDSPRPWLHPEAEAPDGTDPQLCEKEEEEELAERSEHDSGINEEPLLTAEQVIEELEELMQSSPDPEADPDGDEEEEEEEEETEADADSGSGGMEPILLRDLHTFSPTFNNNCSHEGLEQLSAGELVAAAGRAEAASRALSAELVAQLARRDELAFEKEVKTAFIGALLAVQGEQREQREAARRRHRERGLSLQGGRPERGGHMPRKYLNTVIPYEKKGSPPSVEDLQMLTNILFAMKEGNEKVPTLLTDYILKVLCPT
SIO_010081: FEZ1
subclass of: SO_0000673
so part of: FEZ1
location: complement(join(414291..414307,415276..415341,416115..416190,417628..417899,419416..419611,420233..420322,421612..421708,425617..425891))
location: region:414291-425891:-1
so has part: feature:425617-425891:-1:exon
so has part: feature:421612-421708:-1:exon
so has part: feature:420233-420322:-1:exon
so has part: feature:419416-419611:-1:exon
so has part: feature:417628-417899:-1:exon
so has part: feature:416115-416190:-1:exon
so has part: feature:415276-415341:-1:exon
so has part: feature:414291-414307:-1:exon

XP_027300219.1
type: Protein
SIO_000068: ncbiprotein

position:414291:-1
position: 414291
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:425891:-1
position: 425891
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:425617-425891:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:421612-421708:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:420233-420322:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:419416-419611:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:417628-417899:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:416115-416190:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:415276-415341:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:414291-414307:-1:exon

FEZ1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8839
gene: FEZ1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: fasciculation and elongation protein zeta-1 isoform X1
translation: MEAPLVSLEEEFEEGPGDDGGTPRRTADPALAELESFSAEMMSFKSMEDLVQEFDEKLTVCFRNYDAATEGLAPVRGRLQAQEEEERLQDEEVWDALTDGFAPRDSPRPWLHPEAEAPDGTDPQLCEKEEEEELAERSEHDSGINEEPLLTAEQVIEELEELMQSSPDPEADPDGDEEEEEEEEETEADADSGSGGMEPILLRDLHTFSPTFNNNCSHEGLEQLSAGELVAAAGRAEAASRALSAELVAQLARRDELAFEKEVKTAFIGALLAVQGEQREQREAARRRHRERGLSLQGGRPERGGHMPRKRFSMEGISSILHSGLRQTFGPATNEKQYLNTVIPYEKKGSPPSVEDLQMLTNILFAMKEGNEKVPTLLTDYILKVLCPT
SIO_010081: FEZ1
subclass of: SO_0000673
so part of: FEZ1
location: complement(join(414291..414307,415276..415341,416115..416190,416595..416675,417628..417899,419416..419611,420233..420322,421612..421708,425617..425891))
location: region:414291-425891:-1
so has part: feature:425617-425891:-1:exon
so has part: feature:421612-421708:-1:exon
so has part: feature:420233-420322:-1:exon
so has part: feature:419416-419611:-1:exon
so has part: feature:417628-417899:-1:exon
so has part: feature:416595-416675:-1:exon
so has part: feature:416115-416190:-1:exon
so has part: feature:415276-415341:-1:exon
so has part: feature:414291-414307:-1:exon

XP_027300218.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:425617-425891:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:421612-421708:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:420233-420322:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:419416-419611:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:417628-417899:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:416595-416675:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:416115-416190:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:415276-415341:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:414291-414307:-1:exon

VSIG10L2
type: Gene
subclass of: SO_0000704
RO_0002162: 8839
gene: VSIG10L2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 429406..443121
location: region:429406-443121:1
so has part: feature:429406-443121:1:exon
subclass of: SO_0000010

110352736
type: Gene
SIO_000068: ncbigene

position:429406:1
position: 429406
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:443121:1
position: 443121
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:429406-443121:1:exon

VSIG10L2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8839
gene: VSIG10L2
product: V-set and immunoglobulin domain containing 10 like 2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 94% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_038167492.1
SIO_010081: VSIG10L2
subclass of: SO_0000673
so part of: VSIG10L2
location: join(429406..429424,437709..438254,438852..439136,439530..439805,439947..440228,440458..440718,440820..441113,441202..441504,441897..442331,442416..443121)
location: region:429406-443121:1
so has part: feature:429406-429424:1:exon
so has part: feature:437709-438254:1:exon
so has part: feature:438852-439136:1:exon
so has part: feature:439530-439805:1:exon
so has part: feature:439947-440228:1:exon
so has part: feature:440458-440718:1:exon
so has part: feature:440820-441113:1:exon
so has part: feature:441202-441504:1:exon
so has part: feature:441897-442331:1:exon
so has part: feature:442416-443121:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:429406-429424:1:exon

position:429424:1
position: 429424
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:437709-438254:1:exon

position:437709:1
position: 437709
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:438254:1
position: 438254
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:438852-439136:1:exon

position:438852:1
position: 438852
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:439136:1
position: 439136
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:439530-439805:1:exon

position:439530:1
position: 439530
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:439805:1
position: 439805
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:439947-440228:1:exon

position:439947:1
position: 439947
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:440228:1
position: 440228
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:440458-440718:1:exon

position:440458:1
position: 440458
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:440718:1
position: 440718
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:440820-441113:1:exon

position:440820:1
position: 440820
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:441113:1
position: 441113
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:441202-441504:1:exon

position:441202:1
position: 441202
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:441504:1
position: 441504
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:441897-442331:1:exon

position:441897:1
position: 441897
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:442331:1
position: 442331
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:442416-443121:1:exon

position:442416:1
position: 442416
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

VSIG10L2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8839
gene: VSIG10L2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: V-set and immunoglobulin domain-containing protein 10-like 2
translation: MAGGDKGPGQGNPRGGRGGEHSPPWGAQGQAWGAPGCSACCRRWWQVGGRGSPGGRAGGATETWPTRCASRPAQPLDASSVSYEERTVTGVRGRAVELSCGPTVPAVVFWSFTAAGSTGPPQAVAVGSGLEAMVAPGVGALGQASLLNGTLELRELRTAAAGRFFCQGLFPEPGRLRVGYAAVLLRVLVPVSRPFVRLTAAAAVEGTEVTLMCAVREGTAPLSFSWQHREPRGGALAAPMGLGGSGAELRLAPANRSHAGWYVCTARNEVNNRSSEPVYLDIIYGPDEPAISMEPFSPEQGGFSAGEREDVVLSCLAPSNPPSRYIWLHNGSQVHTGQTFVIAAIARGQAGTYTCLAENTHLQTRTQATIILTVYYPPAGSPSCSALATADLRDVALRCRWPGGFPPAQLRWVGPGEEEEEEEEEEAAGPSFSMATNIRPGVTTRNGSSFACLATHPTLREGAMCRTTLWVPAGSPACTAVASKHDEFVMLRCRWEGGMPPATLRWWDSRGEALGVPMPSAAVLVLSADASLGGQDFICVATHPLRVAAAQCHLRLDIPKLEVERSEVAVLEGGEARLACRWCGVTHLGAEMVWYDPQEREVPPGMAKYWLEQDEAWANLTVRDAEWPGDGGTYRCTAANAVGTTSLPVHLRVDRYPAPPNVTISKLRYTRARTEVRLEWRTQGTGNLTGFVVQRRQAKKPQRRAPGPWETAAGDIEPHSRDRRLGGLDPTVVYAFRVLAVNHRTAGHPSEVQTPAEPPFEALPAVTGAAVVGMLVATAVSLLAVRCVARHRDNLPRECRGGGSAGHPGQWKGPRHPHLVCSQGCTTYSSTRECPNPLALVPSSHCAHLAPGESLVPPRASPEAPEIPSTTEDAPGATNREDRAEQGQGDAGGPSTTASAEPLSALPDAAAADLPVDVPIVVMATP
SIO_010081: VSIG10L2
subclass of: SO_0000673
so part of: VSIG10L2
location: join(429406..429424,437709..438254,438852..439136,439530..439805,439947..440228,440458..440718,440820..441113,441202..441504,441897..442331,442416..442495)
location: region:429406-442495:1
so has part: feature:429406-429424:1:exon
so has part: feature:437709-438254:1:exon
so has part: feature:438852-439136:1:exon
so has part: feature:439530-439805:1:exon
so has part: feature:439947-440228:1:exon
so has part: feature:440458-440718:1:exon
so has part: feature:440820-441113:1:exon
so has part: feature:441202-441504:1:exon
so has part: feature:441897-442331:1:exon
so has part: feature:442416-442495:1:exon

XP_038023420.1
type: Protein
SIO_000068: ncbiprotein

position:442495:1
position: 442495
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:429406-429424:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:437709-438254:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:438852-439136:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:439530-439805:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:439947-440228:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:440458-440718:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:440820-441113:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:441202-441504:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:441897-442331:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:442416-442495:1:exon

CDON
type: Gene
subclass of: SO_0000704
RO_0002162: 8839
gene: CDON
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(444936..501425)
location: region:444936-501425:-1
so has part: feature:444936-501425:-1:exon
subclass of: SO_0000010

101790340
type: Gene
SIO_000068: ncbigene

position:444936:-1
position: 444936
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:501425:-1
position: 501425
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:444936-501425:-1:exon

CDON
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8839
gene: CDON
product: cell adhesion associated, oncogene regulated, transcript variant X10
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 8 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 99 samples with support for all annotated introns
transcript id: XM_027444257.2
SIO_010081: CDON
subclass of: SO_0000673
so part of: CDON
location: complement(join(444936..447554,448238..448491,453454..453533,455914..456188,457311..457538,459022..459144,462365..462470,463840..464021,464689..464895,467843..468017,469846..470144,474199..474555,475445..475714,476556..476843,477412..477555,477842..477988,479869..480141,482455..482591,500492..500617))
location: region:444936-500617:-1
so has part: feature:500492-500617:-1:exon
so has part: feature:482455-482591:-1:exon
so has part: feature:479869-480141:-1:exon
so has part: feature:477842-477988:-1:exon
so has part: feature:477412-477555:-1:exon
so has part: feature:476556-476843:-1:exon
so has part: feature:475445-475714:-1:exon
so has part: feature:474199-474555:-1:exon
so has part: feature:469846-470144:-1:exon
so has part: feature:467843-468017:-1:exon
so has part: feature:464689-464895:-1:exon
so has part: feature:463840-464021:-1:exon
so has part: feature:462365-462470:-1:exon
so has part: feature:459022-459144:-1:exon
so has part: feature:457311-457538:-1:exon
so has part: feature:455914-456188:-1:exon
so has part: feature:453454-453533:-1:exon
so has part: feature:448238-448491:-1:exon
so has part: feature:444936-447554:-1:exon

position:500617:-1
position: 500617
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:500492-500617:-1:exon

position:500492:-1
position: 500492
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:482455-482591:-1:exon

position:482455:-1
position: 482455
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:482591:-1
position: 482591
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:479869-480141:-1:exon

position:479869:-1
position: 479869
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:480141:-1
position: 480141
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:477842-477988:-1:exon

position:477842:-1
position: 477842
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:477988:-1
position: 477988
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:477412-477555:-1:exon

position:477412:-1
position: 477412
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:477555:-1
position: 477555
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:476556-476843:-1:exon

position:476556:-1
position: 476556
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:476843:-1
position: 476843
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:475445-475714:-1:exon

position:475445:-1
position: 475445
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:475714:-1
position: 475714
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:474199-474555:-1:exon

position:474199:-1
position: 474199
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:474555:-1
position: 474555
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:469846-470144:-1:exon

position:469846:-1
position: 469846
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:470144:-1
position: 470144
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:467843-468017:-1:exon

position:467843:-1
position: 467843
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:468017:-1
position: 468017
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:464689-464895:-1:exon

position:464689:-1
position: 464689
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:464895:-1
position: 464895
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:463840-464021:-1:exon

position:463840:-1
position: 463840
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:464021:-1
position: 464021
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:462365-462470:-1:exon

position:462365:-1
position: 462365
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:462470:-1
position: 462470
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:459022-459144:-1:exon

position:459022:-1
position: 459022
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:459144:-1
position: 459144
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:457311-457538:-1:exon

position:457311:-1
position: 457311
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:457538:-1
position: 457538
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:455914-456188:-1:exon

position:455914:-1
position: 455914
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:456188:-1
position: 456188
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:453454-453533:-1:exon

position:453454:-1
position: 453454
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:453533:-1
position: 453533
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:448238-448491:-1:exon

position:448238:-1
position: 448238
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:448491:-1
position: 448491
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:444936-447554:-1:exon

position:447554:-1
position: 447554
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

CDON
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8839
gene: CDON
product: cell adhesion associated, oncogene regulated, transcript variant X9
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 10 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments, including 124 samples with support for all annotated introns
transcript id: XM_027444255.2
SIO_010081: CDON
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CDON
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8839
gene: CDON
product: cell adhesion associated, oncogene regulated, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 11 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 94 samples with support for all annotated introns
transcript id: XM_013099606.4
SIO_010081: CDON
subclass of: SO_0000673
so part of: CDON
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CDON
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8839
gene: CDON
product: cell adhesion associated, oncogene regulated, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 11 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 123 samples with support for all annotated introns
transcript id: XM_027444253.2
SIO_010081: CDON
subclass of: SO_0000673
so part of: CDON
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CDON
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8839
gene: CDON
product: cell adhesion associated, oncogene regulated, transcript variant X7
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 11 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 47 samples with support for all annotated introns
transcript id: XM_013099607.4
SIO_010081: CDON
subclass of: SO_0000673
so part of: CDON
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CDON
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8839
gene: CDON
product: cell adhesion associated, oncogene regulated, transcript variant X8
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 11 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 53 samples with support for all annotated introns
transcript id: XM_013099608.4
SIO_010081: CDON
subclass of: SO_0000673
so part of: CDON
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CDON
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8839
gene: CDON
product: cell adhesion associated, oncogene regulated, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 11 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 10 samples with support for all annotated introns
transcript id: XM_038167563.1
SIO_010081: CDON
subclass of: SO_0000673
so part of: CDON
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urn:…
SIO_000300: 6
SIO_000628: feature:476556-476843:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:475445-475714:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:474199-474555:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:469846-470144:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:467843-468017:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:466577-466705:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:464689-464895:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:463840-464021:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:462365-462470:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:459022-459144:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:457311-457538:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:455914-456188:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:453454-453533:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:448238-448491:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:447388-447554:-1:exon

CDON
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8839
gene: CDON
product: cell adhesion associated, oncogene regulated, transcript variant X5
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 11 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 7 samples with support for all annotated introns
transcript id: XM_038167564.1
SIO_010081: CDON
subclass of: SO_0000673
so part of: CDON
location: complement(join(447388..447554,448238..448491,453454..453533,455914..456188,457311..457538,459022..459144,462365..462470,463840..464021,464689..464895,466577..466705,467843..468017,469846..470144,474199..474555,475445..475714,476556..476843,477412..477555,477842..477988,479869..480141,482455..482591,492193..492386))
location: region:447388-492386:-1
so has part: feature:492193-492386:-1:exon
so has part: feature:482455-482591:-1:exon
so has part: feature:479869-480141:-1:exon
so has part: feature:477842-477988:-1:exon
so has part: feature:477412-477555:-1:exon
so has part: feature:476556-476843:-1:exon
so has part: feature:475445-475714:-1:exon
so has part: feature:474199-474555:-1:exon
so has part: feature:469846-470144:-1:exon
so has part: feature:467843-468017:-1:exon
so has part: feature:466577-466705:-1:exon
so has part: feature:464689-464895:-1:exon
so has part: feature:463840-464021:-1:exon
so has part: feature:462365-462470:-1:exon
so has part: feature:459022-459144:-1:exon
so has part: feature:457311-457538:-1:exon
so has part: feature:455914-456188:-1:exon
so has part: feature:453454-453533:-1:exon
so has part: feature:448238-448491:-1:exon
so has part: feature:447388-447554:-1:exon

position:492386:-1
position: 492386
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:492193-492386:-1:exon

position:492193:-1
position: 492193
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:482455-482591:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:479869-480141:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:477842-477988:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:477412-477555:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:476556-476843:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:475445-475714:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:474199-474555:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:469846-470144:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:467843-468017:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:466577-466705:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:464689-464895:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:463840-464021:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:462365-462470:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:459022-459144:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:457311-457538:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:455914-456188:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:453454-453533:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:448238-448491:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:447388-447554:-1:exon

CDON
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8839
gene: CDON
product: cell adhesion associated, oncogene regulated, transcript variant X6
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 11 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 32 samples with support for all annotated introns
transcript id: XM_013099610.4
SIO_010081: CDON
subclass of: SO_0000673
so part of: CDON
location: complement(join(447388..447554,448238..448491,453454..453533,455914..456188,457311..457538,459022..459144,462365..462470,463840..464021,464689..464895,466577..466705,467843..468017,469846..470144,474199..474555,475445..475714,476556..476843,477412..477555,477842..477988,479869..480141,482455..482591,491996..492129))
location: region:447388-492129:-1
so has part: feature:491996-492129:-1:exon
so has part: feature:482455-482591:-1:exon
so has part: feature:479869-480141:-1:exon
so has part: feature:477842-477988:-1:exon
so has part: feature:477412-477555:-1:exon
so has part: feature:476556-476843:-1:exon
so has part: feature:475445-475714:-1:exon
so has part: feature:474199-474555:-1:exon
so has part: feature:469846-470144:-1:exon
so has part: feature:467843-468017:-1:exon
so has part: feature:466577-466705:-1:exon
so has part: feature:464689-464895:-1:exon
so has part: feature:463840-464021:-1:exon
so has part: feature:462365-462470:-1:exon
so has part: feature:459022-459144:-1:exon
so has part: feature:457311-457538:-1:exon
so has part: feature:455914-456188:-1:exon
so has part: feature:453454-453533:-1:exon
so has part: feature:448238-448491:-1:exon
so has part: feature:447388-447554:-1:exon

position:492129:-1
position: 492129
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:491996-492129:-1:exon

position:491996:-1
position: 491996
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:482455-482591:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:479869-480141:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:477842-477988:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:477412-477555:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:476556-476843:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:475445-475714:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:474199-474555:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:469846-470144:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:467843-468017:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:466577-466705:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:464689-464895:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:463840-464021:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:462365-462470:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:459022-459144:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:457311-457538:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:455914-456188:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:453454-453533:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:448238-448491:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:447388-447554:-1:exon

CDON
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8839
gene: CDON
product: cell adhesion associated, oncogene regulated, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 11 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 71 samples with support for all annotated introns
transcript id: XM_005019633.5
SIO_010081: CDON
subclass of: SO_0000673
so part of: CDON
location: complement(join(447388..447554,448238..448491,453454..453533,455914..456188,457311..457538,459022..459144,462365..462470,463840..464021,464689..464895,466577..466705,467843..468017,469846..470144,474199..474555,475445..475714,476556..476843,477412..477555,477842..477988,479869..480141,482455..482591,485108..485242))
location: region:447388-485242:-1
so has part: feature:485108-485242:-1:exon
so has part: feature:482455-482591:-1:exon
so has part: feature:479869-480141:-1:exon
so has part: feature:477842-477988:-1:exon
so has part: feature:477412-477555:-1:exon
so has part: feature:476556-476843:-1:exon
so has part: feature:475445-475714:-1:exon
so has part: feature:474199-474555:-1:exon
so has part: feature:469846-470144:-1:exon
so has part: feature:467843-468017:-1:exon
so has part: feature:466577-466705:-1:exon
so has part: feature:464689-464895:-1:exon
so has part: feature:463840-464021:-1:exon
so has part: feature:462365-462470:-1:exon
so has part: feature:459022-459144:-1:exon
so has part: feature:457311-457538:-1:exon
so has part: feature:455914-456188:-1:exon
so has part: feature:453454-453533:-1:exon
so has part: feature:448238-448491:-1:exon
so has part: feature:447388-447554:-1:exon

position:485242:-1
position: 485242
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:485108-485242:-1:exon

position:485108:-1
position: 485108
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:482455-482591:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:479869-480141:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:477842-477988:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:477412-477555:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:476556-476843:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:475445-475714:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:474199-474555:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:469846-470144:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:467843-468017:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:466577-466705:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:464689-464895:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:463840-464021:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:462365-462470:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:459022-459144:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:457311-457538:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:455914-456188:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:453454-453533:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:448238-448491:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:447388-447554:-1:exon

CDON
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8839
gene: CDON
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: cell adhesion molecule-related/down-regulated by oncogenes isoform X2
translation: MHPDPGHLQAPLFVAVTVLISTTSSGLIPHFTSEPLSTVQKSGAPIQLHCSAEPSTAHISWLFNGEPLDSRLGEVEIQSGSLTIVSLSLSTSGHYQCIANSTVGAVVSRAAAISIGSLANFDTSVKPVIVAEEGGTAFIGCKVPESNPKAQVRFRVRGKWLEQSTDNYLILPSGNLQILNVSLEDKGSYKCAVYNPVTHDLKVEPAGRKLIVTRSSSEGFHILHPLVSQTLAVPQHSSLTLECVVSGLPPASVHWVKDGQDALSRGRWKLLHSHLVSDRLEASDSGNYSCVVGNEFGVVKYINYSLTILEPVSISKGLQDETVAAGATVHFWCDVHGSPAPTLTWLHNAAPLNHSPRHLLLGNSLQIHGVIAEDSGLYQCVANNGIGFVQSTGRLYVQPGSGSRPVIVSPPASVSVTEGGDVTLSCNATGLPVPVIHWYDSRGLITSHPSQVLHPNPQEPSQAMQGSTIAEPTTYFTASQAGSSSLHIRNVTPGRVGEYTCEAINEHGSAKSEAFLTVVPLETGTKAAAEEMAPVEIVQSNESDGDFGVETAVSSLPPTKLHFDAAVTEKPLNSISAPEAPIILSPPQTLKPDKYTLVWRSGRDGGLPINAYFVKYRKLDDSVSAAGSWHTVRVPGSENELRLTELEPSSLYEVLMVARSAAGEGQPAMLTFRTSKVPEAPDRPTISTASESSVYVTWIPRANGGSPITAFKVEYKRLGRNSDWLIAADNISPSKLSVEVRNLEPGEMYKFRVIAVNNYGESPRSAASRPYQVAGFTNRFSNRPITGPHIAYTEAISDTQIMLKWTYITSSNNNTPIQGFYIYYRPTDSDNDSDYKRDIVEGTKQWHLINHLQPETSYDIKMQCYNEGGESEYSNVMICETKVKRMPGASEYPIKDLSTPPNSPDRVGGSSGGLSNGPVRSSDMLYLIVGCVLGVMVLILIVFIAMCLWKNRQQNTMQKYDPPGYLYQGSDINGQRIEYTTLPGTSRVNGSIHGNFISNGGLSNGCPHIHHKVANGVNGIVNGGAGLYPGHTNSLSRTHVDYKHTHHLVNGGGMYTAVPQADPSECISCRNCRNNNRCFTKTNGTFSSNTLPVMPIVAPYQQDSLEMKPLNHVMVAMCLASSIPECSAQLEEDSKEKTEQPSAQHPCCRESMNQLSMEYTDGDNCLHSETSNHALSWSPLILQPVSKDCKEKPGWSSSGVTLNGSGDLRQLQLQET
SIO_010081: CDON
subclass of: SO_0000673
so part of: CDON
location: complement(join(447388..447554,448238..448491,453454..453533,455914..456188,457311..457538,459022..459144,462365..462470,463840..464021,464689..464895,467843..468017,469846..470144,474199..474555,475445..475714,476556..476843,477412..477555,477842..477988,479869..480141,482455..482530))
location: region:447388-482530:-1
so has part: feature:482455-482530:-1:exon
so has part: feature:479869-480141:-1:exon
so has part: feature:477842-477988:-1:exon
so has part: feature:477412-477555:-1:exon
so has part: feature:476556-476843:-1:exon
so has part: feature:475445-475714:-1:exon
so has part: feature:474199-474555:-1:exon
so has part: feature:469846-470144:-1:exon
so has part: feature:467843-468017:-1:exon
so has part: feature:464689-464895:-1:exon
so has part: feature:463840-464021:-1:exon
so has part: feature:462365-462470:-1:exon
so has part: feature:459022-459144:-1:exon
so has part: feature:457311-457538:-1:exon
so has part: feature:455914-456188:-1:exon
so has part: feature:453454-453533:-1:exon
so has part: feature:448238-448491:-1:exon
so has part: feature:447388-447554:-1:exon

XP_027300058.2
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:482455-482530:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:479869-480141:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:477842-477988:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:477412-477555:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:476556-476843:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:475445-475714:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:474199-474555:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:469846-470144:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:467843-468017:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:464689-464895:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:463840-464021:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:462365-462470:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:459022-459144:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:457311-457538:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:455914-456188:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:453454-453533:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:448238-448491:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:447388-447554:-1:exon

CDON
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8839
gene: CDON
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: cell adhesion molecule-related/down-regulated by oncogenes isoform X1
translation: MHPDPGHLQAPLFVAVTVLISTTSSGLIPHFTSEPLSTVQKSGAPIQLHCSAEPSTAHISWLFNGEPLDSRLGEVEIQSGSLTIVSLSLSTSGHYQCIANSTVGAVVSRAAAISIGSLANFDTSVKPVIVAEEGGTAFIGCKVPESNPKAQVRFRVRGKWLEQSTDNYLILPSGNLQILNVSLEDKGSYKCAVYNPVTHDLKVEPAGRKLIVTRSSSEGFHILHPLVSQTLAVPQHSSLTLECVVSGLPPASVHWVKDGQDALSRGRWKLLHSHLVSDRLEASDSGNYSCVVGNEFGVVKYINYSLTILEPVSISKGLQDETVAAGATVHFWCDVHGSPAPTLTWLHNAAPLNHSPRHLLLGNSLQIHGVIAEDSGLYQCVANNGIGFVQSTGRLYVQPGSGSRPVIVSPPASVSVTEGGDVTLSCNATGLPVPVIHWYDSRGLITSHPSQVLHPNPQEPSQAMQGSTIAEPTTYFTASQAGSSSLHIRNVTPGRVGEYTCEAINEHGSAKSEAFLTVVPLETGTKAAAEEMAPVEIVQSNESDGDFGVETAVSSLPPTKLHFDAAVTEKPLNSISAPEAPIILSPPQTLKPDKYTLVWRSGRDGGLPINAYFVKYRKLDDSVSAAGSWHTVRVPGSENELRLTELEPSSLYEVLMVARSAAGEGQPAMLTFRTSKERTSSSKNTQAPSPPVGIPKHPVIHEGTNNFGVVLPDLSRHSGVPEAPDRPTISTASESSVYVTWIPRANGGSPITAFKVEYKRLGRNSDWLIAADNISPSKLSVEVRNLEPGEMYKFRVIAVNNYGESPRSAASRPYQVAGFTNRFSNRPITGPHIAYTEAISDTQIMLKWTYITSSNNNTPIQGFYIYYRPTDSDNDSDYKRDIVEGTKQWHLINHLQPETSYDIKMQCYNEGGESEYSNVMICETKVKRMPGASEYPIKDLSTPPNSPDRVGGSSGGLSNGPVRSSDMLYLIVGCVLGVMVLILIVFIAMCLWKNRQQNTMQKYDPPGYLYQGSDINGQRIEYTTLPGTSRVNGSIHGNFISNGGLSNGCPHIHHKVANGVNGIVNGGAGLYPGHTNSLSRTHVDYKHTHHLVNGGGMYTAVPQADPSECISCRNCRNNNRCFTKTNGTFSSNTLPVMPIVAPYQQDSLEMKPLNHVMVAMCLASSIPECSAQLEEDSKEKTEQPSAQHPCCRESMNQLSMEYTDGDNCLHSETSNHALSWSPLILQPVSKDCKEKPGWSSSGVTLNGSGDLRQLQLQET
SIO_010081: CDON
subclass of: SO_0000673
so part of: CDON
location: complement(join(447388..447554,448238..448491,453454..453533,455914..456188,457311..457538,459022..459144,462365..462470,463840..464021,464689..464895,466577..466705,467843..468017,469846..470144,474199..474555,475445..475714,476556..476843,477412..477555,477842..477988,479869..480141,482455..482530))
location: region:447388-482530:-1
so has part: feature:482455-482530:-1:exon
so has part: feature:479869-480141:-1:exon
so has part: feature:477842-477988:-1:exon
so has part: feature:477412-477555:-1:exon
so has part: feature:476556-476843:-1:exon
so has part: feature:475445-475714:-1:exon
so has part: feature:474199-474555:-1:exon
so has part: feature:469846-470144:-1:exon
so has part: feature:467843-468017:-1:exon
so has part: feature:466577-466705:-1:exon
so has part: feature:464689-464895:-1:exon
so has part: feature:463840-464021:-1:exon
so has part: feature:462365-462470:-1:exon
so has part: feature:459022-459144:-1:exon
so has part: feature:457311-457538:-1:exon
so has part: feature:455914-456188:-1:exon
so has part: feature:453454-453533:-1:exon
so has part: feature:448238-448491:-1:exon
so has part: feature:447388-447554:-1:exon

XP_027300054.2
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:482455-482530:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:479869-480141:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:477842-477988:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:477412-477555:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:476556-476843:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:475445-475714:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:474199-474555:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:469846-470144:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:467843-468017:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:466577-466705:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:464689-464895:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:463840-464021:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:462365-462470:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:459022-459144:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:457311-457538:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:455914-456188:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:453454-453533:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:448238-448491:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:447388-447554:-1:exon

CDON
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8839
gene: CDON
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: cell adhesion molecule-related/down-regulated by oncogenes isoform X1
translation: MHPDPGHLQAPLFVAVTVLISTTSSGLIPHFTSEPLSTVQKSGAPIQLHCSAEPSTAHISWLFNGEPLDSRLGEVEIQSGSLTIVSLSLSTSGHYQCIANSTVGAVVSRAAAISIGSLANFDTSVKPVIVAEEGGTAFIGCKVPESNPKAQVRFRVRGKWLEQSTDNYLILPSGNLQILNVSLEDKGSYKCAVYNPVTHDLKVEPAGRKLIVTRSSSEGFHILHPLVSQTLAVPQHSSLTLECVVSGLPPASVHWVKDGQDALSRGRWKLLHSHLVSDRLEASDSGNYSCVVGNEFGVVKYINYSLTILEPVSISKGLQDETVAAGATVHFWCDVHGSPAPTLTWLHNAAPLNHSPRHLLLGNSLQIHGVIAEDSGLYQCVANNGIGFVQSTGRLYVQPGSGSRPVIVSPPASVSVTEGGDVTLSCNATGLPVPVIHWYDSRGLITSHPSQVLHPNPQEPSQAMQGSTIAEPTTYFTASQAGSSSLHIRNVTPGRVGEYTCEAINEHGSAKSEAFLTVVPLETGTKAAAEEMAPVEIVQSNESDGDFGVETAVSSLPPTKLHFDAAVTEKPLNSISAPEAPIILSPPQTLKPDKYTLVWRSGRDGGLPINAYFVKYRKLDDSVSAAGSWHTVRVPGSENELRLTELEPSSLYEVLMVARSAAGEGQPAMLTFRTSKERTSSSKNTQAPSPPVGIPKHPVIHEGTNNFGVVLPDLSRHSGVPEAPDRPTISTASESSVYVTWIPRANGGSPITAFKVEYKRLGRNSDWLIAADNISPSKLSVEVRNLEPGEMYKFRVIAVNNYGESPRSAASRPYQVAGFTNRFSNRPITGPHIAYTEAISDTQIMLKWTYITSSNNNTPIQGFYIYYRPTDSDNDSDYKRDIVEGTKQWHLINHLQPETSYDIKMQCYNEGGESEYSNVMICETKVKRMPGASEYPIKDLSTPPNSPDRVGGSSGGLSNGPVRSSDMLYLIVGCVLGVMVLILIVFIAMCLWKNRQQNTMQKYDPPGYLYQGSDINGQRIEYTTLPGTSRVNGSIHGNFISNGGLSNGCPHIHHKVANGVNGIVNGGAGLYPGHTNSLSRTHVDYKHTHHLVNGGGMYTAVPQADPSECISCRNCRNNNRCFTKTNGTFSSNTLPVMPIVAPYQQDSLEMKPLNHVMVAMCLASSIPECSAQLEEDSKEKTEQPSAQHPCCRESMNQLSMEYTDGDNCLHSETSNHALSWSPLILQPVSKDCKEKPGWSSSGVTLNGSGDLRQLQLQET
SIO_010081: CDON
subclass of: SO_0000673
so part of: CDON
location: complement(join(447388..447554,448238..448491,453454..453533,455914..456188,457311..457538,459022..459144,462365..462470,463840..464021,464689..464895,466577..466705,467843..468017,469846..470144,474199..474555,475445..475714,476556..476843,477412..477555,477842..477988,479869..480141,482455..482530))
location: region:447388-482530:-1
so has part: feature:482455-482530:-1:exon
so has part: feature:479869-480141:-1:exon
so has part: feature:477842-477988:-1:exon
so has part: feature:477412-477555:-1:exon
so has part: feature:476556-476843:-1:exon
so has part: feature:475445-475714:-1:exon
so has part: feature:474199-474555:-1:exon
so has part: feature:469846-470144:-1:exon
so has part: feature:467843-468017:-1:exon
so has part: feature:466577-466705:-1:exon
so has part: feature:464689-464895:-1:exon
so has part: feature:463840-464021:-1:exon
so has part: feature:462365-462470:-1:exon
so has part: feature:459022-459144:-1:exon
so has part: feature:457311-457538:-1:exon
so has part: feature:455914-456188:-1:exon
so has part: feature:453454-453533:-1:exon
so has part: feature:448238-448491:-1:exon
so has part: feature:447388-447554:-1:exon

XP_012955060.3
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:482455-482530:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:479869-480141:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:477842-477988:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:477412-477555:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:476556-476843:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:475445-475714:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:474199-474555:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:469846-470144:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:467843-468017:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:466577-466705:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:464689-464895:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:463840-464021:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:462365-462470:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:459022-459144:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:457311-457538:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:455914-456188:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:453454-453533:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:448238-448491:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:447388-447554:-1:exon

CDON
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8839
gene: CDON
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: cell adhesion molecule-related/down-regulated by oncogenes isoform X1
translation: MHPDPGHLQAPLFVAVTVLISTTSSGLIPHFTSEPLSTVQKSGAPIQLHCSAEPSTAHISWLFNGEPLDSRLGEVEIQSGSLTIVSLSLSTSGHYQCIANSTVGAVVSRAAAISIGSLANFDTSVKPVIVAEEGGTAFIGCKVPESNPKAQVRFRVRGKWLEQSTDNYLILPSGNLQILNVSLEDKGSYKCAVYNPVTHDLKVEPAGRKLIVTRSSSEGFHILHPLVSQTLAVPQHSSLTLECVVSGLPPASVHWVKDGQDALSRGRWKLLHSHLVSDRLEASDSGNYSCVVGNEFGVVKYINYSLTILEPVSISKGLQDETVAAGATVHFWCDVHGSPAPTLTWLHNAAPLNHSPRHLLLGNSLQIHGVIAEDSGLYQCVANNGIGFVQSTGRLYVQPGSGSRPVIVSPPASVSVTEGGDVTLSCNATGLPVPVIHWYDSRGLITSHPSQVLHPNPQEPSQAMQGSTIAEPTTYFTASQAGSSSLHIRNVTPGRVGEYTCEAINEHGSAKSEAFLTVVPLETGTKAAAEEMAPVEIVQSNESDGDFGVETAVSSLPPTKLHFDAAVTEKPLNSISAPEAPIILSPPQTLKPDKYTLVWRSGRDGGLPINAYFVKYRKLDDSVSAAGSWHTVRVPGSENELRLTELEPSSLYEVLMVARSAAGEGQPAMLTFRTSKERTSSSKNTQAPSPPVGIPKHPVIHEGTNNFGVVLPDLSRHSGVPEAPDRPTISTASESSVYVTWIPRANGGSPITAFKVEYKRLGRNSDWLIAADNISPSKLSVEVRNLEPGEMYKFRVIAVNNYGESPRSAASRPYQVAGFTNRFSNRPITGPHIAYTEAISDTQIMLKWTYITSSNNNTPIQGFYIYYRPTDSDNDSDYKRDIVEGTKQWHLINHLQPETSYDIKMQCYNEGGESEYSNVMICETKVKRMPGASEYPIKDLSTPPNSPDRVGGSSGGLSNGPVRSSDMLYLIVGCVLGVMVLILIVFIAMCLWKNRQQNTMQKYDPPGYLYQGSDINGQRIEYTTLPGTSRVNGSIHGNFISNGGLSNGCPHIHHKVANGVNGIVNGGAGLYPGHTNSLSRTHVDYKHTHHLVNGGGMYTAVPQADPSECISCRNCRNNNRCFTKTNGTFSSNTLPVMPIVAPYQQDSLEMKPLNHVMVAMCLASSIPECSAQLEEDSKEKTEQPSAQHPCCRESMNQLSMEYTDGDNCLHSETSNHALSWSPLILQPVSKDCKEKPGWSSSGVTLNGSGDLRQLQLQET
SIO_010081: CDON
subclass of: SO_0000673
so part of: CDON
location: complement(join(447388..447554,448238..448491,453454..453533,455914..456188,457311..457538,459022..459144,462365..462470,463840..464021,464689..464895,466577..466705,467843..468017,469846..470144,474199..474555,475445..475714,476556..476843,477412..477555,477842..477988,479869..480141,482455..482530))
location: region:447388-482530:-1
so has part: feature:482455-482530:-1:exon
so has part: feature:479869-480141:-1:exon
so has part: feature:477842-477988:-1:exon
so has part: feature:477412-477555:-1:exon
so has part: feature:476556-476843:-1:exon
so has part: feature:475445-475714:-1:exon
so has part: feature:474199-474555:-1:exon
so has part: feature:469846-470144:-1:exon
so has part: feature:467843-468017:-1:exon
so has part: feature:466577-466705:-1:exon
so has part: feature:464689-464895:-1:exon
so has part: feature:463840-464021:-1:exon
so has part: feature:462365-462470:-1:exon
so has part: feature:459022-459144:-1:exon
so has part: feature:457311-457538:-1:exon
so has part: feature:455914-456188:-1:exon
so has part: feature:453454-453533:-1:exon
so has part: feature:448238-448491:-1:exon
so has part: feature:447388-447554:-1:exon

XP_005019690.3
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:482455-482530:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:479869-480141:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:477842-477988:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:477412-477555:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:476556-476843:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:475445-475714:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:474199-474555:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:469846-470144:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:467843-468017:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:466577-466705:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:464689-464895:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:463840-464021:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:462365-462470:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:459022-459144:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:457311-457538:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:455914-456188:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:453454-453533:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:448238-448491:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:447388-447554:-1:exon

CDON
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8839
gene: CDON
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: cell adhesion molecule-related/down-regulated by oncogenes isoform X1
translation: MHPDPGHLQAPLFVAVTVLISTTSSGLIPHFTSEPLSTVQKSGAPIQLHCSAEPSTAHISWLFNGEPLDSRLGEVEIQSGSLTIVSLSLSTSGHYQCIANSTVGAVVSRAAAISIGSLANFDTSVKPVIVAEEGGTAFIGCKVPESNPKAQVRFRVRGKWLEQSTDNYLILPSGNLQILNVSLEDKGSYKCAVYNPVTHDLKVEPAGRKLIVTRSSSEGFHILHPLVSQTLAVPQHSSLTLECVVSGLPPASVHWVKDGQDALSRGRWKLLHSHLVSDRLEASDSGNYSCVVGNEFGVVKYINYSLTILEPVSISKGLQDETVAAGATVHFWCDVHGSPAPTLTWLHNAAPLNHSPRHLLLGNSLQIHGVIAEDSGLYQCVANNGIGFVQSTGRLYVQPGSGSRPVIVSPPASVSVTEGGDVTLSCNATGLPVPVIHWYDSRGLITSHPSQVLHPNPQEPSQAMQGSTIAEPTTYFTASQAGSSSLHIRNVTPGRVGEYTCEAINEHGSAKSEAFLTVVPLETGTKAAAEEMAPVEIVQSNESDGDFGVETAVSSLPPTKLHFDAAVTEKPLNSISAPEAPIILSPPQTLKPDKYTLVWRSGRDGGLPINAYFVKYRKLDDSVSAAGSWHTVRVPGSENELRLTELEPSSLYEVLMVARSAAGEGQPAMLTFRTSKERTSSSKNTQAPSPPVGIPKHPVIHEGTNNFGVVLPDLSRHSGVPEAPDRPTISTASESSVYVTWIPRANGGSPITAFKVEYKRLGRNSDWLIAADNISPSKLSVEVRNLEPGEMYKFRVIAVNNYGESPRSAASRPYQVAGFTNRFSNRPITGPHIAYTEAISDTQIMLKWTYITSSNNNTPIQGFYIYYRPTDSDNDSDYKRDIVEGTKQWHLINHLQPETSYDIKMQCYNEGGESEYSNVMICETKVKRMPGASEYPIKDLSTPPNSPDRVGGSSGGLSNGPVRSSDMLYLIVGCVLGVMVLILIVFIAMCLWKNRQQNTMQKYDPPGYLYQGSDINGQRIEYTTLPGTSRVNGSIHGNFISNGGLSNGCPHIHHKVANGVNGIVNGGAGLYPGHTNSLSRTHVDYKHTHHLVNGGGMYTAVPQADPSECISCRNCRNNNRCFTKTNGTFSSNTLPVMPIVAPYQQDSLEMKPLNHVMVAMCLASSIPECSAQLEEDSKEKTEQPSAQHPCCRESMNQLSMEYTDGDNCLHSETSNHALSWSPLILQPVSKDCKEKPGWSSSGVTLNGSGDLRQLQLQET
SIO_010081: CDON
subclass of: SO_0000673
so part of: CDON
location: complement(join(447388..447554,448238..448491,453454..453533,455914..456188,457311..457538,459022..459144,462365..462470,463840..464021,464689..464895,466577..466705,467843..468017,469846..470144,474199..474555,475445..475714,476556..476843,477412..477555,477842..477988,479869..480141,482455..482530))
location: region:447388-482530:-1
so has part: feature:482455-482530:-1:exon
so has part: feature:479869-480141:-1:exon
so has part: feature:477842-477988:-1:exon
so has part: feature:477412-477555:-1:exon
so has part: feature:476556-476843:-1:exon
so has part: feature:475445-475714:-1:exon
so has part: feature:474199-474555:-1:exon
so has part: feature:469846-470144:-1:exon
so has part: feature:467843-468017:-1:exon
so has part: feature:466577-466705:-1:exon
so has part: feature:464689-464895:-1:exon
so has part: feature:463840-464021:-1:exon
so has part: feature:462365-462470:-1:exon
so has part: feature:459022-459144:-1:exon
so has part: feature:457311-457538:-1:exon
so has part: feature:455914-456188:-1:exon
so has part: feature:453454-453533:-1:exon
so has part: feature:448238-448491:-1:exon
so has part: feature:447388-447554:-1:exon

XP_038023491.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:482455-482530:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:479869-480141:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:477842-477988:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:477412-477555:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:476556-476843:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:475445-475714:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:474199-474555:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:469846-470144:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:467843-468017:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:466577-466705:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:464689-464895:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:463840-464021:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:462365-462470:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:459022-459144:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:457311-457538:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:455914-456188:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:453454-453533:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:448238-448491:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:447388-447554:-1:exon

CDON
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8839
gene: CDON
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: cell adhesion molecule-related/down-regulated by oncogenes isoform X1
translation: MHPDPGHLQAPLFVAVTVLISTTSSGLIPHFTSEPLSTVQKSGAPIQLHCSAEPSTAHISWLFNGEPLDSRLGEVEIQSGSLTIVSLSLSTSGHYQCIANSTVGAVVSRAAAISIGSLANFDTSVKPVIVAEEGGTAFIGCKVPESNPKAQVRFRVRGKWLEQSTDNYLILPSGNLQILNVSLEDKGSYKCAVYNPVTHDLKVEPAGRKLIVTRSSSEGFHILHPLVSQTLAVPQHSSLTLECVVSGLPPASVHWVKDGQDALSRGRWKLLHSHLVSDRLEASDSGNYSCVVGNEFGVVKYINYSLTILEPVSISKGLQDETVAAGATVHFWCDVHGSPAPTLTWLHNAAPLNHSPRHLLLGNSLQIHGVIAEDSGLYQCVANNGIGFVQSTGRLYVQPGSGSRPVIVSPPASVSVTEGGDVTLSCNATGLPVPVIHWYDSRGLITSHPSQVLHPNPQEPSQAMQGSTIAEPTTYFTASQAGSSSLHIRNVTPGRVGEYTCEAINEHGSAKSEAFLTVVPLETGTKAAAEEMAPVEIVQSNESDGDFGVETAVSSLPPTKLHFDAAVTEKPLNSISAPEAPIILSPPQTLKPDKYTLVWRSGRDGGLPINAYFVKYRKLDDSVSAAGSWHTVRVPGSENELRLTELEPSSLYEVLMVARSAAGEGQPAMLTFRTSKERTSSSKNTQAPSPPVGIPKHPVIHEGTNNFGVVLPDLSRHSGVPEAPDRPTISTASESSVYVTWIPRANGGSPITAFKVEYKRLGRNSDWLIAADNISPSKLSVEVRNLEPGEMYKFRVIAVNNYGESPRSAASRPYQVAGFTNRFSNRPITGPHIAYTEAISDTQIMLKWTYITSSNNNTPIQGFYIYYRPTDSDNDSDYKRDIVEGTKQWHLINHLQPETSYDIKMQCYNEGGESEYSNVMICETKVKRMPGASEYPIKDLSTPPNSPDRVGGSSGGLSNGPVRSSDMLYLIVGCVLGVMVLILIVFIAMCLWKNRQQNTMQKYDPPGYLYQGSDINGQRIEYTTLPGTSRVNGSIHGNFISNGGLSNGCPHIHHKVANGVNGIVNGGAGLYPGHTNSLSRTHVDYKHTHHLVNGGGMYTAVPQADPSECISCRNCRNNNRCFTKTNGTFSSNTLPVMPIVAPYQQDSLEMKPLNHVMVAMCLASSIPECSAQLEEDSKEKTEQPSAQHPCCRESMNQLSMEYTDGDNCLHSETSNHALSWSPLILQPVSKDCKEKPGWSSSGVTLNGSGDLRQLQLQET
SIO_010081: CDON
subclass of: SO_0000673
so part of: CDON
location: complement(join(447388..447554,448238..448491,453454..453533,455914..456188,457311..457538,459022..459144,462365..462470,463840..464021,464689..464895,466577..466705,467843..468017,469846..470144,474199..474555,475445..475714,476556..476843,477412..477555,477842..477988,479869..480141,482455..482530))
location: region:447388-482530:-1
so has part: feature:482455-482530:-1:exon
so has part: feature:479869-480141:-1:exon
so has part: feature:477842-477988:-1:exon
so has part: feature:477412-477555:-1:exon
so has part: feature:476556-476843:-1:exon
so has part: feature:475445-475714:-1:exon
so has part: feature:474199-474555:-1:exon
so has part: feature:469846-470144:-1:exon
so has part: feature:467843-468017:-1:exon
so has part: feature:466577-466705:-1:exon
so has part: feature:464689-464895:-1:exon
so has part: feature:463840-464021:-1:exon
so has part: feature:462365-462470:-1:exon
so has part: feature:459022-459144:-1:exon
so has part: feature:457311-457538:-1:exon
so has part: feature:455914-456188:-1:exon
so has part: feature:453454-453533:-1:exon
so has part: feature:448238-448491:-1:exon
so has part: feature:447388-447554:-1:exon

XP_038023492.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:482455-482530:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:479869-480141:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:477842-477988:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:477412-477555:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:476556-476843:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:475445-475714:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:474199-474555:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:469846-470144:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:467843-468017:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:466577-466705:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:464689-464895:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:463840-464021:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:462365-462470:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:459022-459144:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:457311-457538:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:455914-456188:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:453454-453533:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:448238-448491:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:447388-447554:-1:exon

CDON
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8839
gene: CDON
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: cell adhesion molecule-related/down-regulated by oncogenes isoform X1
translation: MHPDPGHLQAPLFVAVTVLISTTSSGLIPHFTSEPLSTVQKSGAPIQLHCSAEPSTAHISWLFNGEPLDSRLGEVEIQSGSLTIVSLSLSTSGHYQCIANSTVGAVVSRAAAISIGSLANFDTSVKPVIVAEEGGTAFIGCKVPESNPKAQVRFRVRGKWLEQSTDNYLILPSGNLQILNVSLEDKGSYKCAVYNPVTHDLKVEPAGRKLIVTRSSSEGFHILHPLVSQTLAVPQHSSLTLECVVSGLPPASVHWVKDGQDALSRGRWKLLHSHLVSDRLEASDSGNYSCVVGNEFGVVKYINYSLTILEPVSISKGLQDETVAAGATVHFWCDVHGSPAPTLTWLHNAAPLNHSPRHLLLGNSLQIHGVIAEDSGLYQCVANNGIGFVQSTGRLYVQPGSGSRPVIVSPPASVSVTEGGDVTLSCNATGLPVPVIHWYDSRGLITSHPSQVLHPNPQEPSQAMQGSTIAEPTTYFTASQAGSSSLHIRNVTPGRVGEYTCEAINEHGSAKSEAFLTVVPLETGTKAAAEEMAPVEIVQSNESDGDFGVETAVSSLPPTKLHFDAAVTEKPLNSISAPEAPIILSPPQTLKPDKYTLVWRSGRDGGLPINAYFVKYRKLDDSVSAAGSWHTVRVPGSENELRLTELEPSSLYEVLMVARSAAGEGQPAMLTFRTSKERTSSSKNTQAPSPPVGIPKHPVIHEGTNNFGVVLPDLSRHSGVPEAPDRPTISTASESSVYVTWIPRANGGSPITAFKVEYKRLGRNSDWLIAADNISPSKLSVEVRNLEPGEMYKFRVIAVNNYGESPRSAASRPYQVAGFTNRFSNRPITGPHIAYTEAISDTQIMLKWTYITSSNNNTPIQGFYIYYRPTDSDNDSDYKRDIVEGTKQWHLINHLQPETSYDIKMQCYNEGGESEYSNVMICETKVKRMPGASEYPIKDLSTPPNSPDRVGGSSGGLSNGPVRSSDMLYLIVGCVLGVMVLILIVFIAMCLWKNRQQNTMQKYDPPGYLYQGSDINGQRIEYTTLPGTSRVNGSIHGNFISNGGLSNGCPHIHHKVANGVNGIVNGGAGLYPGHTNSLSRTHVDYKHTHHLVNGGGMYTAVPQADPSECISCRNCRNNNRCFTKTNGTFSSNTLPVMPIVAPYQQDSLEMKPLNHVMVAMCLASSIPECSAQLEEDSKEKTEQPSAQHPCCRESMNQLSMEYTDGDNCLHSETSNHALSWSPLILQPVSKDCKEKPGWSSSGVTLNGSGDLRQLQLQET
SIO_010081: CDON
subclass of: SO_0000673
so part of: CDON
location: complement(join(447388..447554,448238..448491,453454..453533,455914..456188,457311..457538,459022..459144,462365..462470,463840..464021,464689..464895,466577..466705,467843..468017,469846..470144,474199..474555,475445..475714,476556..476843,477412..477555,477842..477988,479869..480141,482455..482530))
location: region:447388-482530:-1
so has part: feature:482455-482530:-1:exon
so has part: feature:479869-480141:-1:exon
so has part: feature:477842-477988:-1:exon
so has part: feature:477412-477555:-1:exon
so has part: feature:476556-476843:-1:exon
so has part: feature:475445-475714:-1:exon
so has part: feature:474199-474555:-1:exon
so has part: feature:469846-470144:-1:exon
so has part: feature:467843-468017:-1:exon
so has part: feature:466577-466705:-1:exon
so has part: feature:464689-464895:-1:exon
so has part: feature:463840-464021:-1:exon
so has part: feature:462365-462470:-1:exon
so has part: feature:459022-459144:-1:exon
so has part: feature:457311-457538:-1:exon
so has part: feature:455914-456188:-1:exon
so has part: feature:453454-453533:-1:exon
so has part: feature:448238-448491:-1:exon
so has part: feature:447388-447554:-1:exon

XP_012955064.3
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:482455-482530:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:479869-480141:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:477842-477988:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:477412-477555:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:476556-476843:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:475445-475714:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:474199-474555:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:469846-470144:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:467843-468017:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:466577-466705:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:464689-464895:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:463840-464021:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:462365-462470:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:459022-459144:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:457311-457538:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:455914-456188:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:453454-453533:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:448238-448491:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:447388-447554:-1:exon

CDON
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8839
gene: CDON
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: cell adhesion molecule-related/down-regulated by oncogenes isoform X1
translation: MHPDPGHLQAPLFVAVTVLISTTSSGLIPHFTSEPLSTVQKSGAPIQLHCSAEPSTAHISWLFNGEPLDSRLGEVEIQSGSLTIVSLSLSTSGHYQCIANSTVGAVVSRAAAISIGSLANFDTSVKPVIVAEEGGTAFIGCKVPESNPKAQVRFRVRGKWLEQSTDNYLILPSGNLQILNVSLEDKGSYKCAVYNPVTHDLKVEPAGRKLIVTRSSSEGFHILHPLVSQTLAVPQHSSLTLECVVSGLPPASVHWVKDGQDALSRGRWKLLHSHLVSDRLEASDSGNYSCVVGNEFGVVKYINYSLTILEPVSISKGLQDETVAAGATVHFWCDVHGSPAPTLTWLHNAAPLNHSPRHLLLGNSLQIHGVIAEDSGLYQCVANNGIGFVQSTGRLYVQPGSGSRPVIVSPPASVSVTEGGDVTLSCNATGLPVPVIHWYDSRGLITSHPSQVLHPNPQEPSQAMQGSTIAEPTTYFTASQAGSSSLHIRNVTPGRVGEYTCEAINEHGSAKSEAFLTVVPLETGTKAAAEEMAPVEIVQSNESDGDFGVETAVSSLPPTKLHFDAAVTEKPLNSISAPEAPIILSPPQTLKPDKYTLVWRSGRDGGLPINAYFVKYRKLDDSVSAAGSWHTVRVPGSENELRLTELEPSSLYEVLMVARSAAGEGQPAMLTFRTSKERTSSSKNTQAPSPPVGIPKHPVIHEGTNNFGVVLPDLSRHSGVPEAPDRPTISTASESSVYVTWIPRANGGSPITAFKVEYKRLGRNSDWLIAADNISPSKLSVEVRNLEPGEMYKFRVIAVNNYGESPRSAASRPYQVAGFTNRFSNRPITGPHIAYTEAISDTQIMLKWTYITSSNNNTPIQGFYIYYRPTDSDNDSDYKRDIVEGTKQWHLINHLQPETSYDIKMQCYNEGGESEYSNVMICETKVKRMPGASEYPIKDLSTPPNSPDRVGGSSGGLSNGPVRSSDMLYLIVGCVLGVMVLILIVFIAMCLWKNRQQNTMQKYDPPGYLYQGSDINGQRIEYTTLPGTSRVNGSIHGNFISNGGLSNGCPHIHHKVANGVNGIVNGGAGLYPGHTNSLSRTHVDYKHTHHLVNGGGMYTAVPQADPSECISCRNCRNNNRCFTKTNGTFSSNTLPVMPIVAPYQQDSLEMKPLNHVMVAMCLASSIPECSAQLEEDSKEKTEQPSAQHPCCRESMNQLSMEYTDGDNCLHSETSNHALSWSPLILQPVSKDCKEKPGWSSSGVTLNGSGDLRQLQLQET
SIO_010081: CDON
subclass of: SO_0000673
so part of: CDON
location: complement(join(447388..447554,448238..448491,453454..453533,455914..456188,457311..457538,459022..459144,462365..462470,463840..464021,464689..464895,466577..466705,467843..468017,469846..470144,474199..474555,475445..475714,476556..476843,477412..477555,477842..477988,479869..480141,482455..482530))
location: region:447388-482530:-1
so has part: feature:482455-482530:-1:exon
so has part: feature:479869-480141:-1:exon
so has part: feature:477842-477988:-1:exon
so has part: feature:477412-477555:-1:exon
so has part: feature:476556-476843:-1:exon
so has part: feature:475445-475714:-1:exon
so has part: feature:474199-474555:-1:exon
so has part: feature:469846-470144:-1:exon
so has part: feature:467843-468017:-1:exon
so has part: feature:466577-466705:-1:exon
so has part: feature:464689-464895:-1:exon
so has part: feature:463840-464021:-1:exon
so has part: feature:462365-462470:-1:exon
so has part: feature:459022-459144:-1:exon
so has part: feature:457311-457538:-1:exon
so has part: feature:455914-456188:-1:exon
so has part: feature:453454-453533:-1:exon
so has part: feature:448238-448491:-1:exon
so has part: feature:447388-447554:-1:exon

XP_012955061.3
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:482455-482530:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:479869-480141:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:477842-477988:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:477412-477555:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:476556-476843:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:475445-475714:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:474199-474555:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:469846-470144:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:467843-468017:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:466577-466705:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:464689-464895:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:463840-464021:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:462365-462470:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:459022-459144:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:457311-457538:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:455914-456188:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:453454-453533:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:448238-448491:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:447388-447554:-1:exon

CDON
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8839
gene: CDON
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: cell adhesion molecule-related/down-regulated by oncogenes isoform X1
translation: MHPDPGHLQAPLFVAVTVLISTTSSGLIPHFTSEPLSTVQKSGAPIQLHCSAEPSTAHISWLFNGEPLDSRLGEVEIQSGSLTIVSLSLSTSGHYQCIANSTVGAVVSRAAAISIGSLANFDTSVKPVIVAEEGGTAFIGCKVPESNPKAQVRFRVRGKWLEQSTDNYLILPSGNLQILNVSLEDKGSYKCAVYNPVTHDLKVEPAGRKLIVTRSSSEGFHILHPLVSQTLAVPQHSSLTLECVVSGLPPASVHWVKDGQDALSRGRWKLLHSHLVSDRLEASDSGNYSCVVGNEFGVVKYINYSLTILEPVSISKGLQDETVAAGATVHFWCDVHGSPAPTLTWLHNAAPLNHSPRHLLLGNSLQIHGVIAEDSGLYQCVANNGIGFVQSTGRLYVQPGSGSRPVIVSPPASVSVTEGGDVTLSCNATGLPVPVIHWYDSRGLITSHPSQVLHPNPQEPSQAMQGSTIAEPTTYFTASQAGSSSLHIRNVTPGRVGEYTCEAINEHGSAKSEAFLTVVPLETGTKAAAEEMAPVEIVQSNESDGDFGVETAVSSLPPTKLHFDAAVTEKPLNSISAPEAPIILSPPQTLKPDKYTLVWRSGRDGGLPINAYFVKYRKLDDSVSAAGSWHTVRVPGSENELRLTELEPSSLYEVLMVARSAAGEGQPAMLTFRTSKERTSSSKNTQAPSPPVGIPKHPVIHEGTNNFGVVLPDLSRHSGVPEAPDRPTISTASESSVYVTWIPRANGGSPITAFKVEYKRLGRNSDWLIAADNISPSKLSVEVRNLEPGEMYKFRVIAVNNYGESPRSAASRPYQVAGFTNRFSNRPITGPHIAYTEAISDTQIMLKWTYITSSNNNTPIQGFYIYYRPTDSDNDSDYKRDIVEGTKQWHLINHLQPETSYDIKMQCYNEGGESEYSNVMICETKVKRMPGASEYPIKDLSTPPNSPDRVGGSSGGLSNGPVRSSDMLYLIVGCVLGVMVLILIVFIAMCLWKNRQQNTMQKYDPPGYLYQGSDINGQRIEYTTLPGTSRVNGSIHGNFISNGGLSNGCPHIHHKVANGVNGIVNGGAGLYPGHTNSLSRTHVDYKHTHHLVNGGGMYTAVPQADPSECISCRNCRNNNRCFTKTNGTFSSNTLPVMPIVAPYQQDSLEMKPLNHVMVAMCLASSIPECSAQLEEDSKEKTEQPSAQHPCCRESMNQLSMEYTDGDNCLHSETSNHALSWSPLILQPVSKDCKEKPGWSSSGVTLNGSGDLRQLQLQET
SIO_010081: CDON
subclass of: SO_0000673
so part of: CDON
location: complement(join(447388..447554,448238..448491,453454..453533,455914..456188,457311..457538,459022..459144,462365..462470,463840..464021,464689..464895,466577..466705,467843..468017,469846..470144,474199..474555,475445..475714,476556..476843,477412..477555,477842..477988,479869..480141,482455..482530))
location: region:447388-482530:-1
so has part: feature:482455-482530:-1:exon
so has part: feature:479869-480141:-1:exon
so has part: feature:477842-477988:-1:exon
so has part: feature:477412-477555:-1:exon
so has part: feature:476556-476843:-1:exon
so has part: feature:475445-475714:-1:exon
so has part: feature:474199-474555:-1:exon
so has part: feature:469846-470144:-1:exon
so has part: feature:467843-468017:-1:exon
so has part: feature:466577-466705:-1:exon
so has part: feature:464689-464895:-1:exon
so has part: feature:463840-464021:-1:exon
so has part: feature:462365-462470:-1:exon
so has part: feature:459022-459144:-1:exon
so has part: feature:457311-457538:-1:exon
so has part: feature:455914-456188:-1:exon
so has part: feature:453454-453533:-1:exon
so has part: feature:448238-448491:-1:exon
so has part: feature:447388-447554:-1:exon

XP_012955062.3
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:482455-482530:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:479869-480141:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:477842-477988:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:477412-477555:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:476556-476843:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:475445-475714:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:474199-474555:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:469846-470144:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:467843-468017:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:466577-466705:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:464689-464895:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:463840-464021:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:462365-462470:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:459022-459144:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:457311-457538:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:455914-456188:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:453454-453533:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:448238-448491:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:447388-447554:-1:exon

CDON
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8839
gene: CDON
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: cell adhesion molecule-related/down-regulated by oncogenes isoform X1
translation: MHPDPGHLQAPLFVAVTVLISTTSSGLIPHFTSEPLSTVQKSGAPIQLHCSAEPSTAHISWLFNGEPLDSRLGEVEIQSGSLTIVSLSLSTSGHYQCIANSTVGAVVSRAAAISIGSLANFDTSVKPVIVAEEGGTAFIGCKVPESNPKAQVRFRVRGKWLEQSTDNYLILPSGNLQILNVSLEDKGSYKCAVYNPVTHDLKVEPAGRKLIVTRSSSEGFHILHPLVSQTLAVPQHSSLTLECVVSGLPPASVHWVKDGQDALSRGRWKLLHSHLVSDRLEASDSGNYSCVVGNEFGVVKYINYSLTILEPVSISKGLQDETVAAGATVHFWCDVHGSPAPTLTWLHNAAPLNHSPRHLLLGNSLQIHGVIAEDSGLYQCVANNGIGFVQSTGRLYVQPGSGSRPVIVSPPASVSVTEGGDVTLSCNATGLPVPVIHWYDSRGLITSHPSQVLHPNPQEPSQAMQGSTIAEPTTYFTASQAGSSSLHIRNVTPGRVGEYTCEAINEHGSAKSEAFLTVVPLETGTKAAAEEMAPVEIVQSNESDGDFGVETAVSSLPPTKLHFDAAVTEKPLNSISAPEAPIILSPPQTLKPDKYTLVWRSGRDGGLPINAYFVKYRKLDDSVSAAGSWHTVRVPGSENELRLTELEPSSLYEVLMVARSAAGEGQPAMLTFRTSKERTSSSKNTQAPSPPVGIPKHPVIHEGTNNFGVVLPDLSRHSGVPEAPDRPTISTASESSVYVTWIPRANGGSPITAFKVEYKRLGRNSDWLIAADNISPSKLSVEVRNLEPGEMYKFRVIAVNNYGESPRSAASRPYQVAGFTNRFSNRPITGPHIAYTEAISDTQIMLKWTYITSSNNNTPIQGFYIYYRPTDSDNDSDYKRDIVEGTKQWHLINHLQPETSYDIKMQCYNEGGESEYSNVMICETKVKRMPGASEYPIKDLSTPPNSPDRVGGSSGGLSNGPVRSSDMLYLIVGCVLGVMVLILIVFIAMCLWKNRQQNTMQKYDPPGYLYQGSDINGQRIEYTTLPGTSRVNGSIHGNFISNGGLSNGCPHIHHKVANGVNGIVNGGAGLYPGHTNSLSRTHVDYKHTHHLVNGGGMYTAVPQADPSECISCRNCRNNNRCFTKTNGTFSSNTLPVMPIVAPYQQDSLEMKPLNHVMVAMCLASSIPECSAQLEEDSKEKTEQPSAQHPCCRESMNQLSMEYTDGDNCLHSETSNHALSWSPLILQPVSKDCKEKPGWSSSGVTLNGSGDLRQLQLQET
SIO_010081: CDON
subclass of: SO_0000673
so part of: CDON
location: complement(join(447388..447554,448238..448491,453454..453533,455914..456188,457311..457538,459022..459144,462365..462470,463840..464021,464689..464895,466577..466705,467843..468017,469846..470144,474199..474555,475445..475714,476556..476843,477412..477555,477842..477988,479869..480141,482455..482530))
location: region:447388-482530:-1
so has part: feature:482455-482530:-1:exon
so has part: feature:479869-480141:-1:exon
so has part: feature:477842-477988:-1:exon
so has part: feature:477412-477555:-1:exon
so has part: feature:476556-476843:-1:exon
so has part: feature:475445-475714:-1:exon
so has part: feature:474199-474555:-1:exon
so has part: feature:469846-470144:-1:exon
so has part: feature:467843-468017:-1:exon
so has part: feature:466577-466705:-1:exon
so has part: feature:464689-464895:-1:exon
so has part: feature:463840-464021:-1:exon
so has part: feature:462365-462470:-1:exon
so has part: feature:459022-459144:-1:exon
so has part: feature:457311-457538:-1:exon
so has part: feature:455914-456188:-1:exon
so has part: feature:453454-453533:-1:exon
so has part: feature:448238-448491:-1:exon
so has part: feature:447388-447554:-1:exon

XP_027300056.2
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:482455-482530:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:479869-480141:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:477842-477988:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:477412-477555:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:476556-476843:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:475445-475714:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:474199-474555:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:469846-470144:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:467843-468017:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:466577-466705:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:464689-464895:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:463840-464021:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:462365-462470:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:459022-459144:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:457311-457538:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:455914-456188:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:453454-453533:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:448238-448491:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:447388-447554:-1:exon

CDON
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8839
gene: CDON
product: cell adhesion associated, oncogene regulated, transcript variant X11
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 8 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 86 samples with support for all annotated introns
transcript id: XM_038167565.1
SIO_010081: CDON
subclass of: SO_0000673
so part of: CDON
location: complement(join(448288..448491,453454..453562,455914..456188,457311..457538,459022..459144,462365..462470,463840..464021,464689..464895,466577..466705,467843..468017,469846..470144,474199..474555,475445..475714,476556..476843,477412..477555,477842..477988,479869..480141,482455..482591,500492..500617))
location: region:448288-500617:-1
so has part: feature:500492-500617:-1:exon
so has part: feature:482455-482591:-1:exon
so has part: feature:479869-480141:-1:exon
so has part: feature:477842-477988:-1:exon
so has part: feature:477412-477555:-1:exon
so has part: feature:476556-476843:-1:exon
so has part: feature:475445-475714:-1:exon
so has part: feature:474199-474555:-1:exon
so has part: feature:469846-470144:-1:exon
so has part: feature:467843-468017:-1:exon
so has part: feature:466577-466705:-1:exon
so has part: feature:464689-464895:-1:exon
so has part: feature:463840-464021:-1:exon
so has part: feature:462365-462470:-1:exon
so has part: feature:459022-459144:-1:exon
so has part: feature:457311-457538:-1:exon
so has part: feature:455914-456188:-1:exon
so has part: feature:453454-453562:-1:exon
so has part: feature:448288-448491:-1:exon

position:448288:-1
position: 448288
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:500492-500617:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:482455-482591:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:479869-480141:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:477842-477988:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:477412-477555:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:476556-476843:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:475445-475714:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:474199-474555:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:469846-470144:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:467843-468017:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:466577-466705:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:464689-464895:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:463840-464021:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:462365-462470:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:459022-459144:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:457311-457538:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:455914-456188:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:453454-453562:-1:exon

position:453562:-1
position: 453562
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:448288-448491:-1:exon

CDON
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8839
gene: CDON
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: cell adhesion molecule-related/down-regulated by oncogenes isoform X3
translation: MHPDPGHLQAPLFVAVTVLISTTSSGLIPHFTSEPLSTVQKSGAPIQLHCSAEPSTAHISWLFNGEPLDSRLGEVEIQSGSLTIVSLSLSTSGHYQCIANSTVGAVVSRAAAISIGSLANFDTSVKPVIVAEEGGTAFIGCKVPESNPKAQVRFRVRGKWLEQSTDNYLILPSGNLQILNVSLEDKGSYKCAVYNPVTHDLKVEPAGRKLIVTRSSSEGFHILHPLVSQTLAVPQHSSLTLECVVSGLPPASVHWVKDGQDALSRGRWKLLHSHLVSDRLEASDSGNYSCVVGNEFGVVKYINYSLTILEPVSISKGLQDETVAAGATVHFWCDVHGSPAPTLTWLHNAAPLNHSPRHLLLGNSLQIHGVIAEDSGLYQCVANNGIGFVQSTGRLYVQPGSGSRPVIVSPPASVSVTEGGDVTLSCNATGLPVPVIHWYDSRGLITSHPSQVLHPNPQEPSQAMQGSTIAEPTTYFTASQAGSSSLHIRNVTPGRVGEYTCEAINEHGSAKSEAFLTVVPLETGTKAAAEEMAPVEIVQSNESDGDFGVETAVSSLPPTKLHFDAAVTEKPLNSISAPEAPIILSPPQTLKPDKYTLVWRSGRDGGLPINAYFVKYRKLDDSVSAAGSWHTVRVPGSENELRLTELEPSSLYEVLMVARSAAGEGQPAMLTFRTSKERTSSSKNTQAPSPPVGIPKHPVIHEGTNNFGVVLPDLSRHSGVPEAPDRPTISTASESSVYVTWIPRANGGSPITAFKVEYKRLGRNSDWLIAADNISPSKLSVEVRNLEPGEMYKFRVIAVNNYGESPRSAASRPYQVAGFTNRFSNRPITGPHIAYTEAISDTQIMLKWTYITSSNNNTPIQGFYIYYRPTDSDNDSDYKRDIVEGTKQWHLINHLQPETSYDIKMQCYNEGGESEYSNVMICETKVKRMPGASEYPIKDLSTPPNSPDRVGGSSGGLSNGPVRSSDMLYLIVGCVLGVMVLILIVFIAMCLWKNRQQNTMQKYDPPGYLYQGSDINGQRIEYTTLPGTSRVNGSIHGNFISNGGLSNGCPHIHHKVANGVNGIVNGGAGLYPGHTNSLSRTHVDYKHTHHLVNPLIVESSCFRVVGCTRQCRRLTPPSASAAETVGTITGVSPKPMALSAATRYLSCPS
SIO_010081: CDON
subclass of: SO_0000673
so part of: CDON
location: complement(join(448430..448491,453454..453562,455914..456188,457311..457538,459022..459144,462365..462470,463840..464021,464689..464895,466577..466705,467843..468017,469846..470144,474199..474555,475445..475714,476556..476843,477412..477555,477842..477988,479869..480141,482455..482530))
location: region:448430-482530:-1
so has part: feature:482455-482530:-1:exon
so has part: feature:479869-480141:-1:exon
so has part: feature:477842-477988:-1:exon
so has part: feature:477412-477555:-1:exon
so has part: feature:476556-476843:-1:exon
so has part: feature:475445-475714:-1:exon
so has part: feature:474199-474555:-1:exon
so has part: feature:469846-470144:-1:exon
so has part: feature:467843-468017:-1:exon
so has part: feature:466577-466705:-1:exon
so has part: feature:464689-464895:-1:exon
so has part: feature:463840-464021:-1:exon
so has part: feature:462365-462470:-1:exon
so has part: feature:459022-459144:-1:exon
so has part: feature:457311-457538:-1:exon
so has part: feature:455914-456188:-1:exon
so has part: feature:453454-453562:-1:exon
so has part: feature:448430-448491:-1:exon

XP_038023493.1
type: Protein
SIO_000068: ncbiprotein

position:448430:-1
position: 448430
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:482455-482530:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:479869-480141:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:477842-477988:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:477412-477555:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:476556-476843:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:475445-475714:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:474199-474555:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:469846-470144:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:467843-468017:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:466577-466705:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:464689-464895:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:463840-464021:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:462365-462470:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:459022-459144:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:457311-457538:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:455914-456188:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:453454-453562:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:448430-448491:-1:exon

CHEK1
type: Gene
subclass of: SO_0000704
RO_0002162: 8839
gene: CHEK1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(519092..524128)
location: region:519092-524128:-1
so has part: feature:519092-524128:-1:exon
subclass of: SO_0000010

101790669
type: Gene
SIO_000068: ncbigene

position:519092:-1
position: 519092
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:524128:-1
position: 524128
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:519092-524128:-1:exon

CHEK1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8839
gene: CHEK1
product: checkpoint kinase 1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 126 samples with support for all annotated introns
transcript id: XM_027444326.2
SIO_010081: CHEK1
subclass of: SO_0000673
so part of: CHEK1
location: complement(join(519092..519705,519889..519990,520069..520200,521072..521249,521576..521684,521755..521850,521928..522032,522847..523035,523104..523173,523242..523306,523423..523646,523984..524128))
location: region:519092-524128:-1
so has part: feature:523984-524128:-1:exon
so has part: feature:523423-523646:-1:exon
so has part: feature:523242-523306:-1:exon
so has part: feature:523104-523173:-1:exon
so has part: feature:522847-523035:-1:exon
so has part: feature:521928-522032:-1:exon
so has part: feature:521755-521850:-1:exon
so has part: feature:521576-521684:-1:exon
so has part: feature:521072-521249:-1:exon
so has part: feature:520069-520200:-1:exon
so has part: feature:519889-519990:-1:exon
so has part: feature:519092-519705:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:523984-524128:-1:exon

position:523984:-1
position: 523984
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:523423-523646:-1:exon

position:523423:-1
position: 523423
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:523646:-1
position: 523646
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:523242-523306:-1:exon

position:523242:-1
position: 523242
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:523306:-1
position: 523306
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:523104-523173:-1:exon

position:523104:-1
position: 523104
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:523173:-1
position: 523173
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:522847-523035:-1:exon

position:522847:-1
position: 522847
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:523035:-1
position: 523035
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:521928-522032:-1:exon

position:521928:-1
position: 521928
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:522032:-1
position: 522032
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:521755-521850:-1:exon

position:521755:-1
position: 521755
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:521850:-1
position: 521850
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:521576-521684:-1:exon

position:521576:-1
position: 521576
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:521684:-1
position: 521684
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:521072-521249:-1:exon

position:521072:-1
position: 521072
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:521249:-1
position: 521249
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:520069-520200:-1:exon

position:520069:-1
position: 520069
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:520200:-1
position: 520200
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:519889-519990:-1:exon

position:519889:-1
position: 519889
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:519990:-1
position: 519990
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:519092-519705:-1:exon

position:519705:-1
position: 519705
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

CHEK1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8839
gene: CHEK1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: serine/threonine-protein kinase Chk1
translation: MAGPVPFVEDWDLVQTLGEGAYGEVQLAVNRRTEEAVAVKIVDMKRAADCPENIKKEICINKMLNHENVVKFYGHRREGATQYLFLEYCSGGELFDRIEPDIGMPEPEAQRFFQQLIAGVVYLHSMGITHRDLKPENLLLDDRDNLKISDFGLATVFKHNGRERLLNKMCGTLPYVAPELLRRPEFRAEPVDVWACGVVLTAMLAGELPWDQPSDSCQEYSDWKERKTYLPPWRKIDSAPLALLHKILTESPTARITIPDIKKDRWYCKPLKKGVKRARVSSGGVTDSPGAFSKHVRSDMDFSPVKGVLGEDKASYSTSQPEPGTGVALWDSGTGSIDKLVQGISFSQPACPEHMLVNSQLLGTPGSSQSPWQRLVKRMTRFFTKLDADGSYRSLKEVCEKMGYGWKRSCTNQVTISTTDRRNNKLIFKVNLVEMESKILVDFRLSKGDGLEFKRHFLKIKGKLSDIVSTQKVWAPVT
SIO_010081: CHEK1
subclass of: SO_0000673
so part of: CHEK1
location: complement(join(519610..519705,519889..519990,520069..520200,521072..521249,521576..521684,521755..521850,521928..522032,522847..523035,523104..523173,523242..523306,523423..523646,523984..524054))
location: region:519610-524054:-1
so has part: feature:523984-524054:-1:exon
so has part: feature:523423-523646:-1:exon
so has part: feature:523242-523306:-1:exon
so has part: feature:523104-523173:-1:exon
so has part: feature:522847-523035:-1:exon
so has part: feature:521928-522032:-1:exon
so has part: feature:521755-521850:-1:exon
so has part: feature:521576-521684:-1:exon
so has part: feature:521072-521249:-1:exon
so has part: feature:520069-520200:-1:exon
so has part: feature:519889-519990:-1:exon
so has part: feature:519610-519705:-1:exon

XP_027300127.1
type: Protein
SIO_000068: ncbiprotein

position:519610:-1
position: 519610
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:524054:-1
position: 524054
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:523984-524054:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:523423-523646:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:523242-523306:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:523104-523173:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:522847-523035:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:521928-522032:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:521755-521850:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:521576-521684:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:521072-521249:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:520069-520200:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:519889-519990:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:519610-519705:-1:exon

STT3A
type: Gene
subclass of: SO_0000704
RO_0002162: 8839
gene: STT3A
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(524277..533251)
location: region:524277-533251:-1
so has part: feature:524277-533251:-1:exon
subclass of: SO_0000010

101790992
type: Gene
SIO_000068: ncbigene

position:524277:-1
position: 524277
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:533251:-1
position: 533251
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:524277-533251:-1:exon

STT3A
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8839
gene: STT3A
product: STT3 oligosaccharyltransferase complex catalytic subunit A, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, 17 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 126 samples with support for all annotated introns
transcript id: XM_038167661.1
SIO_010081: STT3A
subclass of: SO_0000673
so part of: STT3A
location: complement(join(524277..524558,524644..524759,524838..525026,525119..525221,525296..525412,525487..525675,525807..525962,526706..526797,526978..527133,527694..527874,528686..528850,529264..529370,530064..530154,530345..530490,530932..531053,531906..531966,532262..532385,533113..533251))
location: region:524277-533251:-1
so has part: feature:533113-533251:-1:exon
so has part: feature:532262-532385:-1:exon
so has part: feature:531906-531966:-1:exon
so has part: feature:530932-531053:-1:exon
so has part: feature:530345-530490:-1:exon
so has part: feature:530064-530154:-1:exon
so has part: feature:529264-529370:-1:exon
so has part: feature:528686-528850:-1:exon
so has part: feature:527694-527874:-1:exon
so has part: feature:526978-527133:-1:exon
so has part: feature:526706-526797:-1:exon
so has part: feature:525807-525962:-1:exon
so has part: feature:525487-525675:-1:exon
so has part: feature:525296-525412:-1:exon
so has part: feature:525119-525221:-1:exon
so has part: feature:524838-525026:-1:exon
so has part: feature:524644-524759:-1:exon
so has part: feature:524277-524558:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:533113-533251:-1:exon

position:533113:-1
position: 533113
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:532262-532385:-1:exon

position:532262:-1
position: 532262
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:532385:-1
position: 532385
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:531906-531966:-1:exon

position:531906:-1
position: 531906
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:531966:-1
position: 531966
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:530932-531053:-1:exon

position:530932:-1
position: 530932
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:531053:-1
position: 531053
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:530345-530490:-1:exon

position:530345:-1
position: 530345
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:530490:-1
position: 530490
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:530064-530154:-1:exon

position:530064:-1
position: 530064
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:530154:-1
position: 530154
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:529264-529370:-1:exon

position:529264:-1
position: 529264
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:529370:-1
position: 529370
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:528686-528850:-1:exon

position:528686:-1
position: 528686
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:528850:-1
position: 528850
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:527694-527874:-1:exon

position:527694:-1
position: 527694
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:527874:-1
position: 527874
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:526978-527133:-1:exon

position:526978:-1
position: 526978
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:527133:-1
position: 527133
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:526706-526797:-1:exon

position:526706:-1
position: 526706
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:526797:-1
position: 526797
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:525807-525962:-1:exon

position:525807:-1
position: 525807
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:525962:-1
position: 525962
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:525487-525675:-1:exon

position:525487:-1
position: 525487
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:525675:-1
position: 525675
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:525296-525412:-1:exon

position:525296:-1
position: 525296
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:525412:-1
position: 525412
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:525119-525221:-1:exon

position:525119:-1
position: 525119
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:525221:-1
position: 525221
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:524838-525026:-1:exon

position:524838:-1
position: 524838
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:525026:-1
position: 525026
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:524644-524759:-1:exon

position:524644:-1
position: 524644
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:524759:-1
position: 524759
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:524277-524558:-1:exon

position:524558:-1
position: 524558
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

STT3A
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8839
gene: STT3A
product: STT3 oligosaccharyltransferase complex catalytic subunit A, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, 17 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 114 samples with support for all annotated introns
transcript id: XM_038167662.1
SIO_010081: STT3A
subclass of: SO_0000673
so part of: STT3A
location: complement(join(524277..524558,524644..524759,524838..525026,525119..525221,525296..525412,525487..525675,525807..525962,526706..526797,526978..527133,527694..527874,528686..528850,529264..529370,530064..530154,530345..530490,530932..531053,531906..531966,532262..532385,532666..532750,533113..533183))
location: region:524277-533183:-1
so has part: feature:533113-533183:-1:exon
so has part: feature:532666-532750:-1:exon
so has part: feature:532262-532385:-1:exon
so has part: feature:531906-531966:-1:exon
so has part: feature:530932-531053:-1:exon
so has part: feature:530345-530490:-1:exon
so has part: feature:530064-530154:-1:exon
so has part: feature:529264-529370:-1:exon
so has part: feature:528686-528850:-1:exon
so has part: feature:527694-527874:-1:exon
so has part: feature:526978-527133:-1:exon
so has part: feature:526706-526797:-1:exon
so has part: feature:525807-525962:-1:exon
so has part: feature:525487-525675:-1:exon
so has part: feature:525296-525412:-1:exon
so has part: feature:525119-525221:-1:exon
so has part: feature:524838-525026:-1:exon
so has part: feature:524644-524759:-1:exon
so has part: feature:524277-524558:-1:exon

position:533183:-1
position: 533183
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:533113-533183:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:532666-532750:-1:exon

position:532666:-1
position: 532666
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:532750:-1
position: 532750
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:532262-532385:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:531906-531966:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:530932-531053:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:530345-530490:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:530064-530154:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:529264-529370:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:528686-528850:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:527694-527874:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:526978-527133:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:526706-526797:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:525807-525962:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:525487-525675:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:525296-525412:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:525119-525221:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:524838-525026:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:524644-524759:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:524277-524558:-1:exon

STT3A
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8839
gene: STT3A
product: STT3 oligosaccharyltransferase complex catalytic subunit A, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, 17 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 114 samples with support for all annotated introns
transcript id: XM_038167663.1
SIO_010081: STT3A
subclass of: SO_0000673
so part of: STT3A
location: complement(join(524277..524558,524644..524759,524838..525026,525119..525221,525296..525412,525487..525675,525807..525962,526706..526797,526978..527133,527694..527874,528686..528850,529264..529370,530064..530154,530345..530490,530932..531053,531906..531966,532262..532385,532666..533046))
location: region:524277-533046:-1
so has part: feature:532666-533046:-1:exon
so has part: feature:532262-532385:-1:exon
so has part: feature:531906-531966:-1:exon
so has part: feature:530932-531053:-1:exon
so has part: feature:530345-530490:-1:exon
so has part: feature:530064-530154:-1:exon
so has part: feature:529264-529370:-1:exon
so has part: feature:528686-528850:-1:exon
so has part: feature:527694-527874:-1:exon
so has part: feature:526978-527133:-1:exon
so has part: feature:526706-526797:-1:exon
so has part: feature:525807-525962:-1:exon
so has part: feature:525487-525675:-1:exon
so has part: feature:525296-525412:-1:exon
so has part: feature:525119-525221:-1:exon
so has part: feature:524838-525026:-1:exon
so has part: feature:524644-524759:-1:exon
so has part: feature:524277-524558:-1:exon

position:533046:-1
position: 533046
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:532666-533046:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:532262-532385:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:531906-531966:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:530932-531053:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:530345-530490:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:530064-530154:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:529264-529370:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:528686-528850:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:527694-527874:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:526978-527133:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:526706-526797:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:525807-525962:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:525487-525675:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:525296-525412:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:525119-525221:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:524838-525026:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:524644-524759:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:524277-524558:-1:exon

STT3A
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8839
gene: STT3A
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit STT3A isoform X1
translation: MAGRRGGGGAGGGGLRGADGRGGGAQRGARVFARPLSAFDVTMTKLGFLRLSYEKQDTLLKLLILSMAAVLSFSTRLFSVLRFESVIHEFDPYFNYRTTRFLAEEGFYKFHNWFDDRAWYPLGRIIGGTIYPGLMITSAAIYHVLHFFHITIDIRNVCVFLAPLFSSFTTIVTYHLTKELKDAGAGLLAAAMIAVVPGYISRSVAGSYDNEGIAIFCMLLTYYMWIKAVKTGSIYWAAMCALAYFYMVSSWGGYVFLINLIPLHVLVLMLTGRFSHRIYVAYCTVYCLGTILSMQISFVGFQPVLSSEHMAALGVFGLCQIHAFVDYLRSKLNPQQFEILFRSVISLVGFVLLTIGAVLMLTGKISPWTGRFYSLLDPSYAKNNIPIIASVSEHQPTTWSSYYFDLQLLVFMFPVGLYYCFSNLSDARIFIIMYGVTSMYFSAVMVRLMLVLAPVMCILSGIGVSQVLSTYMKNLDISRPDKKSKKQQDSTYPIKNEVASGMILVMAFFLITYTFHSTWVTSEAYSSPSIVLSARGGDGSRIIFDDFREAYYWLRHNTPEDAKVMSWWDYGYQITAMANRTILVDNNTWNNTHISRVGQAMASTEEKAYEIMRELDVSYVLVIFGGLTGYSSDDINKFLWMVRIGGSTDTGRHIKEHDYYTPTGEFRVDREGSPVLLNCLMYKMCYYRFGQVYTEAKRPPGYDRVRNAEIGNKDFELDVLEEAYTTEHWLVRIYKVKDLDNRGLSRT
SIO_010081: STT3A
subclass of: SO_0000673
so part of: STT3A
location: complement(join(524520..524558,524644..524759,524838..525026,525119..525221,525296..525412,525487..525675,525807..525962,526706..526797,526978..527133,527694..527874,528686..528850,529264..529370,530064..530154,530345..530490,530932..531053,531906..531966,532262..532385,533113..533202))
location: region:524520-533202:-1
so has part: feature:533113-533202:-1:exon
so has part: feature:532262-532385:-1:exon
so has part: feature:531906-531966:-1:exon
so has part: feature:530932-531053:-1:exon
so has part: feature:530345-530490:-1:exon
so has part: feature:530064-530154:-1:exon
so has part: feature:529264-529370:-1:exon
so has part: feature:528686-528850:-1:exon
so has part: feature:527694-527874:-1:exon
so has part: feature:526978-527133:-1:exon
so has part: feature:526706-526797:-1:exon
so has part: feature:525807-525962:-1:exon
so has part: feature:525487-525675:-1:exon
so has part: feature:525296-525412:-1:exon
so has part: feature:525119-525221:-1:exon
so has part: feature:524838-525026:-1:exon
so has part: feature:524644-524759:-1:exon
so has part: feature:524520-524558:-1:exon

XP_038023589.1
type: Protein
SIO_000068: ncbiprotein

position:524520:-1
position: 524520
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:533202:-1
position: 533202
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:533113-533202:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:532262-532385:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:531906-531966:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:530932-531053:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:530345-530490:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:530064-530154:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:529264-529370:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:528686-528850:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:527694-527874:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:526978-527133:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:526706-526797:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:525807-525962:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:525487-525675:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:525296-525412:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:525119-525221:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:524838-525026:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:524644-524759:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:524520-524558:-1:exon

STT3A
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8839
gene: STT3A
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit STT3A isoform X2
translation: MTKLGFLRLSYEKQDTLLKLLILSMAAVLSFSTRLFSVLRFESVIHEFDPYFNYRTTRFLAEEGFYKFHNWFDDRAWYPLGRIIGGTIYPGLMITSAAIYHVLHFFHITIDIRNVCVFLAPLFSSFTTIVTYHLTKELKDAGAGLLAAAMIAVVPGYISRSVAGSYDNEGIAIFCMLLTYYMWIKAVKTGSIYWAAMCALAYFYMVSSWGGYVFLINLIPLHVLVLMLTGRFSHRIYVAYCTVYCLGTILSMQISFVGFQPVLSSEHMAALGVFGLCQIHAFVDYLRSKLNPQQFEILFRSVISLVGFVLLTIGAVLMLTGKISPWTGRFYSLLDPSYAKNNIPIIASVSEHQPTTWSSYYFDLQLLVFMFPVGLYYCFSNLSDARIFIIMYGVTSMYFSAVMVRLMLVLAPVMCILSGIGVSQVLSTYMKNLDISRPDKKSKKQQDSTYPIKNEVASGMILVMAFFLITYTFHSTWVTSEAYSSPSIVLSARGGDGSRIIFDDFREAYYWLRHNTPEDAKVMSWWDYGYQITAMANRTILVDNNTWNNTHISRVGQAMASTEEKAYEIMRELDVSYVLVIFGGLTGYSSDDINKFLWMVRIGGSTDTGRHIKEHDYYTPTGEFRVDREGSPVLLNCLMYKMCYYRFGQVYTEAKRPPGYDRVRNAEIGNKDFELDVLEEAYTTEHWLVRIYKVKDLDNRGLSRT
SIO_010081: STT3A
subclass of: SO_0000673
so part of: STT3A
location: complement(join(524520..524558,524644..524759,524838..525026,525119..525221,525296..525412,525487..525675,525807..525962,526706..526797,526978..527133,527694..527874,528686..528850,529264..529370,530064..530154,530345..530490,530932..531053,531906..531966,532262..532349))
location: region:524520-532349:-1
so has part: feature:532262-532349:-1:exon
so has part: feature:531906-531966:-1:exon
so has part: feature:530932-531053:-1:exon
so has part: feature:530345-530490:-1:exon
so has part: feature:530064-530154:-1:exon
so has part: feature:529264-529370:-1:exon
so has part: feature:528686-528850:-1:exon
so has part: feature:527694-527874:-1:exon
so has part: feature:526978-527133:-1:exon
so has part: feature:526706-526797:-1:exon
so has part: feature:525807-525962:-1:exon
so has part: feature:525487-525675:-1:exon
so has part: feature:525296-525412:-1:exon
so has part: feature:525119-525221:-1:exon
so has part: feature:524838-525026:-1:exon
so has part: feature:524644-524759:-1:exon
so has part: feature:524520-524558:-1:exon

XP_038023590.1
type: Protein
SIO_000068: ncbiprotein

position:532349:-1
position: 532349
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:532262-532349:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:531906-531966:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:530932-531053:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:530345-530490:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:530064-530154:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:529264-529370:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:528686-528850:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:527694-527874:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:526978-527133:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:526706-526797:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:525807-525962:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:525487-525675:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:525296-525412:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:525119-525221:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:524838-525026:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:524644-524759:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:524520-524558:-1:exon

STT3A
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8839
gene: STT3A
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit STT3A isoform X2
translation: MTKLGFLRLSYEKQDTLLKLLILSMAAVLSFSTRLFSVLRFESVIHEFDPYFNYRTTRFLAEEGFYKFHNWFDDRAWYPLGRIIGGTIYPGLMITSAAIYHVLHFFHITIDIRNVCVFLAPLFSSFTTIVTYHLTKELKDAGAGLLAAAMIAVVPGYISRSVAGSYDNEGIAIFCMLLTYYMWIKAVKTGSIYWAAMCALAYFYMVSSWGGYVFLINLIPLHVLVLMLTGRFSHRIYVAYCTVYCLGTILSMQISFVGFQPVLSSEHMAALGVFGLCQIHAFVDYLRSKLNPQQFEILFRSVISLVGFVLLTIGAVLMLTGKISPWTGRFYSLLDPSYAKNNIPIIASVSEHQPTTWSSYYFDLQLLVFMFPVGLYYCFSNLSDARIFIIMYGVTSMYFSAVMVRLMLVLAPVMCILSGIGVSQVLSTYMKNLDISRPDKKSKKQQDSTYPIKNEVASGMILVMAFFLITYTFHSTWVTSEAYSSPSIVLSARGGDGSRIIFDDFREAYYWLRHNTPEDAKVMSWWDYGYQITAMANRTILVDNNTWNNTHISRVGQAMASTEEKAYEIMRELDVSYVLVIFGGLTGYSSDDINKFLWMVRIGGSTDTGRHIKEHDYYTPTGEFRVDREGSPVLLNCLMYKMCYYRFGQVYTEAKRPPGYDRVRNAEIGNKDFELDVLEEAYTTEHWLVRIYKVKDLDNRGLSRT
SIO_010081: STT3A
subclass of: SO_0000673
so part of: STT3A
location: complement(join(524520..524558,524644..524759,524838..525026,525119..525221,525296..525412,525487..525675,525807..525962,526706..526797,526978..527133,527694..527874,528686..528850,529264..529370,530064..530154,530345..530490,530932..531053,531906..531966,532262..532349))
location: region:524520-532349:-1
so has part: feature:532262-532349:-1:exon
so has part: feature:531906-531966:-1:exon
so has part: feature:530932-531053:-1:exon
so has part: feature:530345-530490:-1:exon
so has part: feature:530064-530154:-1:exon
so has part: feature:529264-529370:-1:exon
so has part: feature:528686-528850:-1:exon
so has part: feature:527694-527874:-1:exon
so has part: feature:526978-527133:-1:exon
so has part: feature:526706-526797:-1:exon
so has part: feature:525807-525962:-1:exon
so has part: feature:525487-525675:-1:exon
so has part: feature:525296-525412:-1:exon
so has part: feature:525119-525221:-1:exon
so has part: feature:524838-525026:-1:exon
so has part: feature:524644-524759:-1:exon
so has part: feature:524520-524558:-1:exon

XP_038023591.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:532262-532349:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:531906-531966:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:530932-531053:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:530345-530490:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:530064-530154:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:529264-529370:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:528686-528850:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:527694-527874:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:526978-527133:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:526706-526797:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:525807-525962:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:525487-525675:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:525296-525412:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:525119-525221:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:524838-525026:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:524644-524759:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:524520-524558:-1:exon

EI24
type: Gene
subclass of: SO_0000704
RO_0002162: 8839
gene: EI24
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(534306..544949)
location: region:534306-544949:-1
so has part: feature:534306-544949:-1:exon
subclass of: SO_0000010

101791927
type: Gene
SIO_000068: ncbigene

position:534306:-1
position: 534306
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:544949:-1
position: 544949
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:534306-544949:-1:exon

EI24
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8839
gene: EI24
product: EI24 autophagy associated transmembrane protein
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 9 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 126 samples with support for all annotated introns
transcript id: XM_027444423.2
SIO_010081: EI24
subclass of: SO_0000673
so part of: EI24
location: complement(join(534306..534674,534988..535062,535235..535346,535785..535896,536036..536155,536536..536660,537443..537509,538376..538436,540163..540308,542954..543101,544837..544949))
location: region:534306-544949:-1
so has part: feature:544837-544949:-1:exon
so has part: feature:542954-543101:-1:exon
so has part: feature:540163-540308:-1:exon
so has part: feature:538376-538436:-1:exon
so has part: feature:537443-537509:-1:exon
so has part: feature:536536-536660:-1:exon
so has part: feature:536036-536155:-1:exon
so has part: feature:535785-535896:-1:exon
so has part: feature:535235-535346:-1:exon
so has part: feature:534988-535062:-1:exon
so has part: feature:534306-534674:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:544837-544949:-1:exon

position:544837:-1
position: 544837
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:542954-543101:-1:exon

position:542954:-1
position: 542954
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:543101:-1
position: 543101
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:540163-540308:-1:exon

position:540163:-1
position: 540163
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:540308:-1
position: 540308
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:538376-538436:-1:exon

position:538376:-1
position: 538376
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:538436:-1
position: 538436
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:537443-537509:-1:exon

position:537443:-1
position: 537443
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:537509:-1
position: 537509
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:536536-536660:-1:exon

position:536536:-1
position: 536536
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:536660:-1
position: 536660
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:536036-536155:-1:exon

position:536036:-1
position: 536036
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:536155:-1
position: 536155
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:535785-535896:-1:exon

position:535785:-1
position: 535785
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:535896:-1
position: 535896
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:535235-535346:-1:exon

position:535235:-1
position: 535235
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:535346:-1
position: 535346
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:534988-535062:-1:exon

position:534988:-1
position: 534988
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:535062:-1
position: 535062
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:534306-534674:-1:exon

position:534674:-1
position: 534674
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

EI24
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8839
gene: EI24
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: etoposide-induced protein 2.4 homolog
translation: MADSVKTFLHDLVRGIKDSIWGICTISKLDARIQQKREEQRRRRANSALAQRRFHMEERKQENEPRIVSRIFQCCAWNGGVFWLSLFLFYRVFIPVLQSVTAQIIGDPSLHGDVWSWLEFILTSIFSALWVLPLFVLSKVVNAIWFQDIADLAFEVSGRKPHPFPSVSKIIADMLFNLLLQALFLIQGMIVSLFPIDIIGQLISLLHMSLLYSLYCFEYRWFNKGIEMHQRLSNIERNWPYYFGFGLPLAFLTAMQSSYIISGCLFSILFPLFIISANEAKTPGKTYHFQLRLFSLVVFLSNRLFHKTVYLQSTLSSASADRLLTPQPSPAKHKPALGH
SIO_010081: EI24
subclass of: SO_0000673
so part of: EI24
location: complement(join(534515..534674,534988..535062,535235..535346,535785..535896,536036..536155,536536..536660,537443..537509,538376..538436,540163..540308,542954..542995))
location: region:534515-542995:-1
so has part: feature:542954-542995:-1:exon
so has part: feature:540163-540308:-1:exon
so has part: feature:538376-538436:-1:exon
so has part: feature:537443-537509:-1:exon
so has part: feature:536536-536660:-1:exon
so has part: feature:536036-536155:-1:exon
so has part: feature:535785-535896:-1:exon
so has part: feature:535235-535346:-1:exon
so has part: feature:534988-535062:-1:exon
so has part: feature:534515-534674:-1:exon

XP_027300224.1
type: Protein
SIO_000068: ncbiprotein

position:534515:-1
position: 534515
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:542995:-1
position: 542995
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:542954-542995:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:540163-540308:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:538376-538436:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:537443-537509:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:536536-536660:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:536036-536155:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:535785-535896:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:535235-535346:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:534988-535062:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:534515-534674:-1:exon

FOXRED1
type: Gene
subclass of: SO_0000704
RO_0002162: 8839
gene: FOXRED1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(546298..549138)
location: region:546298-549138:-1
so has part: feature:546298-549138:-1:exon
subclass of: SO_0000010

113839852
type: Gene
SIO_000068: ncbigene

position:546298:-1
position: 546298
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:549138:-1
position: 549138
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:546298-549138:-1:exon

FOXRED1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8839
gene: FOXRED1
product: FAD dependent oxidoreductase domain containing 1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 8 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 122 samples with support for all annotated introns
transcript id: XM_038167543.1
SIO_010081: FOXRED1
subclass of: SO_0000673
so part of: FOXRED1
location: complement(join(546298..546642,546732..546836,546914..547043,547145..547296,547388..547452,547580..547681,547779..547873,547955..548073,548161..548271,548374..548600,548977..549138))
location: region:546298-549138:-1
so has part: feature:548977-549138:-1:exon
so has part: feature:548374-548600:-1:exon
so has part: feature:548161-548271:-1:exon
so has part: feature:547955-548073:-1:exon
so has part: feature:547779-547873:-1:exon
so has part: feature:547580-547681:-1:exon
so has part: feature:547388-547452:-1:exon
so has part: feature:547145-547296:-1:exon
so has part: feature:546914-547043:-1:exon
so has part: feature:546732-546836:-1:exon
so has part: feature:546298-546642:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:548977-549138:-1:exon

position:548977:-1
position: 548977
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:548374-548600:-1:exon

position:548374:-1
position: 548374
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:548600:-1
position: 548600
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:548161-548271:-1:exon

position:548161:-1
position: 548161
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:548271:-1
position: 548271
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:547955-548073:-1:exon

position:547955:-1
position: 547955
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:548073:-1
position: 548073
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:547779-547873:-1:exon

position:547779:-1
position: 547779
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:547873:-1
position: 547873
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:547580-547681:-1:exon

position:547580:-1
position: 547580
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:547681:-1
position: 547681
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:547388-547452:-1:exon

position:547388:-1
position: 547388
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:547452:-1
position: 547452
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:547145-547296:-1:exon

position:547145:-1
position: 547145
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:547296:-1
position: 547296
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:546914-547043:-1:exon

position:546914:-1
position: 546914
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:547043:-1
position: 547043
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:546732-546836:-1:exon

position:546732:-1
position: 546732
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:546836:-1
position: 546836
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:546298-546642:-1:exon

position:546642:-1
position: 546642
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

FOXRED1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8839
gene: FOXRED1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: FAD-dependent oxidoreductase domain-containing protein 1
translation: MLRGRRALRALRGPGAGVVAGGRGGAAPGRPLRVAAPRSSDVFRELGPALSRLGQTLREQLPGSGGWEPQWSPQSCPPPEQADVVVVGGGVVGWAVAYWLKALENQQHGMRVLVVERDPTYSRASTVLSVGGIRQQFSLPENIRLSLFSAAFLRNINDYLWVPNEPPVDVQFQPSGYLFLASQRGAATLEAGMKLQREEGAKVALLSPSQLKAKFPWLNTEDVAVASYGLENEGWFDPWSLLTAFRRKAMSLGVLSCIGEAKSFIMPTEDEMPLMARDRVKCVNVRLPDSPEQQPVACAIVVIAAGAWSGELLATATASLPGGSLAPLPIQPRKRYVYMWHCPDGPGLECPFLIDTSGAYFRREGIAGNFLGGMSPPEGDEPDTGDLEVDHDFFQEQVWPRLAHRVPPFQTLKVRSSWAGYYDYNTFDQNGVLGRHPQLQNVFVVGGFSGHGLQQAPAAGRAAAELLLHGRCSTMDVGRLAPGRLLHGEPLREAAIV
SIO_010081: FOXRED1
subclass of: SO_0000673
so part of: FOXRED1
location: complement(join(546388..546642,546732..546836,546914..547043,547145..547296,547388..547452,547580..547681,547779..547873,547955..548073,548161..548271,548374..548600,548977..549109))
location: region:546388-549109:-1
so has part: feature:548977-549109:-1:exon
so has part: feature:548374-548600:-1:exon
so has part: feature:548161-548271:-1:exon
so has part: feature:547955-548073:-1:exon
so has part: feature:547779-547873:-1:exon
so has part: feature:547580-547681:-1:exon
so has part: feature:547388-547452:-1:exon
so has part: feature:547145-547296:-1:exon
so has part: feature:546914-547043:-1:exon
so has part: feature:546732-546836:-1:exon
so has part: feature:546388-546642:-1:exon

XP_038023471.1
type: Protein
SIO_000068: ncbiprotein

position:546388:-1
position: 546388
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:549109:-1
position: 549109
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:548977-549109:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:548374-548600:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:548161-548271:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:547955-548073:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:547779-547873:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:547580-547681:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:547388-547452:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:547145-547296:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:546914-547043:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:546732-546836:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:546388-546642:-1:exon

SRPRA
type: Gene
subclass of: SO_0000704
RO_0002162: 8839
gene: SRPRA
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 549398..558441
location: region:549398-558441:1
so has part: feature:549398-558441:1:exon
subclass of: SO_0000010

101798995
type: Gene
SIO_000068: ncbigene

position:549398:1
position: 549398
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:558441:1
position: 558441
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:549398-558441:1:exon

SRPRA
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8839
gene: SRPRA
product: SRP receptor subunit alpha
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 126 samples with support for all annotated introns
transcript id: XM_027444421.2
SIO_010081: SRPRA
subclass of: SO_0000673
so part of: SRPRA
location: join(549398..549598,550040..550123,551430..551593,551914..552074,552971..553124,553591..553744,554098..554204,554394..554512,554847..554933,555288..555460,555549..555762,555845..556008,556136..556234,557116..558441)
location: region:549398-558441:1
so has part: feature:549398-549598:1:exon
so has part: feature:550040-550123:1:exon
so has part: feature:551430-551593:1:exon
so has part: feature:551914-552074:1:exon
so has part: feature:552971-553124:1:exon
so has part: feature:553591-553744:1:exon
so has part: feature:554098-554204:1:exon
so has part: feature:554394-554512:1:exon
so has part: feature:554847-554933:1:exon
so has part: feature:555288-555460:1:exon
so has part: feature:555549-555762:1:exon
so has part: feature:555845-556008:1:exon
so has part: feature:556136-556234:1:exon
so has part: feature:557116-558441:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:549398-549598:1:exon

position:549598:1
position: 549598
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:550040-550123:1:exon

position:550040:1
position: 550040
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:550123:1
position: 550123
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:551430-551593:1:exon

position:551430:1
position: 551430
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:551593:1
position: 551593
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:551914-552074:1:exon

position:551914:1
position: 551914
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:552074:1
position: 552074
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:552971-553124:1:exon

position:552971:1
position: 552971
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:553124:1
position: 553124
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:553591-553744:1:exon

position:553591:1
position: 553591
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:553744:1
position: 553744
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:554098-554204:1:exon

position:554098:1
position: 554098
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:554204:1
position: 554204
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:554394-554512:1:exon

position:554394:1
position: 554394
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:554512:1
position: 554512
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:554847-554933:1:exon

position:554847:1
position: 554847
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:554933:1
position: 554933
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:555288-555460:1:exon

position:555288:1
position: 555288
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:555460:1
position: 555460
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:555549-555762:1:exon

position:555549:1
position: 555549
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:555762:1
position: 555762
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:555845-556008:1:exon

position:555845:1
position: 555845
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:556008:1
position: 556008
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:556136-556234:1:exon

position:556136:1
position: 556136
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:556234:1
position: 556234
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:557116-558441:1:exon

position:557116:1
position: 557116
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

SRPRA
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8839
gene: SRPRA
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: signal recognition particle receptor subunit alpha
translation: MLDFFTIFSKGGLVLWCFQGVRGPAAAATAPVNALIRSVLLQERGGNNSFTHEALTLKYKLDNQFELVFVVGFQKILTLTYVDKLIDDVHKEFRDKYRNEFQQKGTLGLLNGTFDFKDDFLRLLREAEESSKVRAPTVMKTFEQSVKSQKTVKCMIETRGEKPKEKVKTKKNKGSKKEGVETVTASNKAAPGEKQPSSAGDKEELTKDEILQKNREEFFKRHMKAGEKSSKSPKPDTQKEKGKKPRVWDLGNSNAKVLDYSDSTTNGNSEACPVEEFDPDVALGDRNREPGRLYDLEYESDEEAEEEKVIQNTSKPSTKKGGLGGMFGMLKGLVGSKSLTREDMDPVLEKMKDHLIAKNVAAEIAVQLCESVAKKLEGKVMGTFTTVTSTVKQALQEALVQILQPQRRVDVLRDVMDAQRHRRPYVVTFCGVNGVGKSTNLAKISFWLIENGFSVLIAACDTFRAGAVEQLRTHTRRLNALHPPESHGGRTMVQLYEKGYGKDAAGIAMEAISYARNQGFDVVLVDTAGRMQDNAPLMTALAKLIAVNAPDLVLFVGEALVGNEAVDQLVKFNKALADHSMAQTPRLIDGIVLTKFDTIDDKVGAAISMTYITSKPIVFVGTGQTYCDLRSLNAKAVVAALMKA
SIO_010081: SRPRA
subclass of: SO_0000673
so part of: SRPRA
location: join(549473..549598,550040..550123,551430..551593,551914..552074,552971..553124,553591..553744,554098..554204,554394..554512,554847..554933,555288..555460,555549..555762,555845..556008,556136..556234,557116..557244)
location: region:549473-557244:1
so has part: feature:549473-549598:1:exon
so has part: feature:550040-550123:1:exon
so has part: feature:551430-551593:1:exon
so has part: feature:551914-552074:1:exon
so has part: feature:552971-553124:1:exon
so has part: feature:553591-553744:1:exon
so has part: feature:554098-554204:1:exon
so has part: feature:554394-554512:1:exon
so has part: feature:554847-554933:1:exon
so has part: feature:555288-555460:1:exon
so has part: feature:555549-555762:1:exon
so has part: feature:555845-556008:1:exon
so has part: feature:556136-556234:1:exon
so has part: feature:557116-557244:1:exon

XP_027300222.1
type: Protein
SIO_000068: ncbiprotein

position:549473:1
position: 549473
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:557244:1
position: 557244
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:549473-549598:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:550040-550123:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:551430-551593:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:551914-552074:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:552971-553124:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:553591-553744:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:554098-554204:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:554394-554512:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:554847-554933:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:555288-555460:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:555549-555762:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:555845-556008:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:556136-556234:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:557116-557244:1:exon

FAM118B
type: Gene
subclass of: SO_0000704
RO_0002162: 8839
gene: FAM118B
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(558584..571213)
location: region:558584-571213:-1
so has part: feature:558584-571213:-1:exon
subclass of: SO_0000010

101792121
type: Gene
SIO_000068: ncbigene

position:558584:-1
position: 558584
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:571213:-1
position: 571213
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:558584-571213:-1:exon

FAM118B
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8839
gene: FAM118B
product: family with sequence similarity 118 member B, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 7 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 104 samples with support for all annotated introns
transcript id: XM_038167546.1
SIO_010081: FAM118B
subclass of: SO_0000673
so part of: FAM118B
location: complement(join(558584..559120,559432..559491,560108..560393,560971..561099,562505..562732,563391..563643,565827..565904,570594..570642,571150..571213))
location: region:558584-571213:-1
so has part: feature:571150-571213:-1:exon
so has part: feature:570594-570642:-1:exon
so has part: feature:565827-565904:-1:exon
so has part: feature:563391-563643:-1:exon
so has part: feature:562505-562732:-1:exon
so has part: feature:560971-561099:-1:exon
so has part: feature:560108-560393:-1:exon
so has part: feature:559432-559491:-1:exon
so has part: feature:558584-559120:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:571150-571213:-1:exon

position:571150:-1
position: 571150
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:570594-570642:-1:exon

position:570594:-1
position: 570594
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:570642:-1
position: 570642
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:565827-565904:-1:exon

position:565827:-1
position: 565827
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:565904:-1
position: 565904
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:563391-563643:-1:exon

position:563391:-1
position: 563391
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:563643:-1
position: 563643
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:562505-562732:-1:exon

position:562505:-1
position: 562505
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:562732:-1
position: 562732
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:560971-561099:-1:exon

position:560971:-1
position: 560971
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:561099:-1
position: 561099
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:560108-560393:-1:exon

position:560108:-1
position: 560108
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:560393:-1
position: 560393
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:559432-559491:-1:exon

position:559432:-1
position: 559432
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:559491:-1
position: 559491
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:558584-559120:-1:exon

position:559120:-1
position: 559120
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

FAM118B
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8839
gene: FAM118B
product: family with sequence similarity 118 member B, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 7 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 126 samples with support for all annotated introns
transcript id: XM_038167545.1
SIO_010081: FAM118B
subclass of: SO_0000673
so part of: FAM118B
location: complement(join(558584..559120,559432..559491,560108..560393,560971..561099,562505..562732,563391..563643,565827..565904,570594..570904))
location: region:558584-570904:-1
so has part: feature:570594-570904:-1:exon
so has part: feature:565827-565904:-1:exon
so has part: feature:563391-563643:-1:exon
so has part: feature:562505-562732:-1:exon
so has part: feature:560971-561099:-1:exon
so has part: feature:560108-560393:-1:exon
so has part: feature:559432-559491:-1:exon
so has part: feature:558584-559120:-1:exon

position:570904:-1
position: 570904
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:570594-570904:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:565827-565904:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:563391-563643:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:562505-562732:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:560971-561099:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:560108-560393:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:559432-559491:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:558584-559120:-1:exon

FAM118B
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8839
gene: FAM118B
product: family with sequence similarity 118 member B, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 7 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 75 samples with support for all annotated introns
transcript id: XM_038167547.1
SIO_010081: FAM118B
subclass of: SO_0000673
so part of: FAM118B
location: complement(join(558584..559120,559432..559491,560108..560393,560971..561099,562505..562732,563391..563643,565827..565904,570544..570567))
location: region:558584-570567:-1
so has part: feature:570544-570567:-1:exon
so has part: feature:565827-565904:-1:exon
so has part: feature:563391-563643:-1:exon
so has part: feature:562505-562732:-1:exon
so has part: feature:560971-561099:-1:exon
so has part: feature:560108-560393:-1:exon
so has part: feature:559432-559491:-1:exon
so has part: feature:558584-559120:-1:exon

position:570567:-1
position: 570567
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:570544-570567:-1:exon

position:570544:-1
position: 570544
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:565827-565904:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:563391-563643:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:562505-562732:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:560971-561099:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:560108-560393:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:559432-559491:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:558584-559120:-1:exon

FAM118B
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8839
gene: FAM118B
product: family with sequence similarity 118 member B, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 7 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 105 samples with support for all annotated introns
transcript id: XM_013099615.4
SIO_010081: FAM118B
subclass of: SO_0000673
so part of: FAM118B
location: complement(join(558584..559120,559432..559491,560108..560393,560971..561099,562505..562732,563391..563643,565827..565904,568835..568897))
location: region:558584-568897:-1
so has part: feature:568835-568897:-1:exon
so has part: feature:565827-565904:-1:exon
so has part: feature:563391-563643:-1:exon
so has part: feature:562505-562732:-1:exon
so has part: feature:560971-561099:-1:exon
so has part: feature:560108-560393:-1:exon
so has part: feature:559432-559491:-1:exon
so has part: feature:558584-559120:-1:exon

position:568897:-1
position: 568897
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:568835-568897:-1:exon

position:568835:-1
position: 568835
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:565827-565904:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:563391-563643:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:562505-562732:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:560971-561099:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:560108-560393:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:559432-559491:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:558584-559120:-1:exon

FAM118B
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8839
gene: FAM118B
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protein FAM118B
translation: MASTVSLGKDTLLEDGMPPAKKPRKLLPSLKTKKPRELVLVIGTGISAAVAPQVPALKSWKGLIQALLDAAIDFDLLEDEESKRFQKCLHEDKNLVHVAHDLIQKLSPRTSNVRSTFFKDCLYEVFDDLESKMEDSGKQLLQSVLHLMENGALVLTTNFDNLLELYAVHQGKHLESLDLTDEKKVLEWAQEKRKLSVLHIHGVYTNPSGIVLHPAGYQNVLRNTEVMQEIQKLYENKSFLFLGCGWTVDDTTFQALFLEAVKHKSDLEHFMLVRRGDVDEFKKLRENMLDKGIKVISYGDEYADLPEYFERLTTEIAMRGRTGVLKEGQQLNGSAAAHDEIKGCST
SIO_010081: FAM118B
subclass of: SO_0000673
so part of: FAM118B
location: complement(join(559107..559120,559432..559491,560108..560393,560971..561099,562505..562732,563391..563643,565827..565897))
location: region:559107-565897:-1
so has part: feature:565827-565897:-1:exon
so has part: feature:563391-563643:-1:exon
so has part: feature:562505-562732:-1:exon
so has part: feature:560971-561099:-1:exon
so has part: feature:560108-560393:-1:exon
so has part: feature:559432-559491:-1:exon
so has part: feature:559107-559120:-1:exon

XP_038023473.1
type: Protein
SIO_000068: ncbiprotein

position:559107:-1
position: 559107
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:565897:-1
position: 565897
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:565827-565897:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:563391-563643:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:562505-562732:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:560971-561099:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:560108-560393:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:559432-559491:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:559107-559120:-1:exon

FAM118B
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8839
gene: FAM118B
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protein FAM118B
translation: MASTVSLGKDTLLEDGMPPAKKPRKLLPSLKTKKPRELVLVIGTGISAAVAPQVPALKSWKGLIQALLDAAIDFDLLEDEESKRFQKCLHEDKNLVHVAHDLIQKLSPRTSNVRSTFFKDCLYEVFDDLESKMEDSGKQLLQSVLHLMENGALVLTTNFDNLLELYAVHQGKHLESLDLTDEKKVLEWAQEKRKLSVLHIHGVYTNPSGIVLHPAGYQNVLRNTEVMQEIQKLYENKSFLFLGCGWTVDDTTFQALFLEAVKHKSDLEHFMLVRRGDVDEFKKLRENMLDKGIKVISYGDEYADLPEYFERLTTEIAMRGRTGVLKEGQQLNGSAAAHDEIKGCST
SIO_010081: FAM118B
subclass of: SO_0000673
so part of: FAM118B
location: complement(join(559107..559120,559432..559491,560108..560393,560971..561099,562505..562732,563391..563643,565827..565897))
location: region:559107-565897:-1
so has part: feature:565827-565897:-1:exon
so has part: feature:563391-563643:-1:exon
so has part: feature:562505-562732:-1:exon
so has part: feature:560971-561099:-1:exon
so has part: feature:560108-560393:-1:exon
so has part: feature:559432-559491:-1:exon
so has part: feature:559107-559120:-1:exon

XP_038023474.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:565827-565897:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:563391-563643:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:562505-562732:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:560971-561099:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:560108-560393:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:559432-559491:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:559107-559120:-1:exon

FAM118B
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8839
gene: FAM118B
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protein FAM118B
translation: MASTVSLGKDTLLEDGMPPAKKPRKLLPSLKTKKPRELVLVIGTGISAAVAPQVPALKSWKGLIQALLDAAIDFDLLEDEESKRFQKCLHEDKNLVHVAHDLIQKLSPRTSNVRSTFFKDCLYEVFDDLESKMEDSGKQLLQSVLHLMENGALVLTTNFDNLLELYAVHQGKHLESLDLTDEKKVLEWAQEKRKLSVLHIHGVYTNPSGIVLHPAGYQNVLRNTEVMQEIQKLYENKSFLFLGCGWTVDDTTFQALFLEAVKHKSDLEHFMLVRRGDVDEFKKLRENMLDKGIKVISYGDEYADLPEYFERLTTEIAMRGRTGVLKEGQQLNGSAAAHDEIKGCST
SIO_010081: FAM118B
subclass of: SO_0000673
so part of: FAM118B
location: complement(join(559107..559120,559432..559491,560108..560393,560971..561099,562505..562732,563391..563643,565827..565897))
location: region:559107-565897:-1
so has part: feature:565827-565897:-1:exon
so has part: feature:563391-563643:-1:exon
so has part: feature:562505-562732:-1:exon
so has part: feature:560971-561099:-1:exon
so has part: feature:560108-560393:-1:exon
so has part: feature:559432-559491:-1:exon
so has part: feature:559107-559120:-1:exon

XP_038023475.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:565827-565897:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:563391-563643:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:562505-562732:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:560971-561099:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:560108-560393:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:559432-559491:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:559107-559120:-1:exon

FAM118B
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8839
gene: FAM118B
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protein FAM118B
translation: MASTVSLGKDTLLEDGMPPAKKPRKLLPSLKTKKPRELVLVIGTGISAAVAPQVPALKSWKGLIQALLDAAIDFDLLEDEESKRFQKCLHEDKNLVHVAHDLIQKLSPRTSNVRSTFFKDCLYEVFDDLESKMEDSGKQLLQSVLHLMENGALVLTTNFDNLLELYAVHQGKHLESLDLTDEKKVLEWAQEKRKLSVLHIHGVYTNPSGIVLHPAGYQNVLRNTEVMQEIQKLYENKSFLFLGCGWTVDDTTFQALFLEAVKHKSDLEHFMLVRRGDVDEFKKLRENMLDKGIKVISYGDEYADLPEYFERLTTEIAMRGRTGVLKEGQQLNGSAAAHDEIKGCST
SIO_010081: FAM118B
subclass of: SO_0000673
so part of: FAM118B
location: complement(join(559107..559120,559432..559491,560108..560393,560971..561099,562505..562732,563391..563643,565827..565897))
location: region:559107-565897:-1
so has part: feature:565827-565897:-1:exon
so has part: feature:563391-563643:-1:exon
so has part: feature:562505-562732:-1:exon
so has part: feature:560971-561099:-1:exon
so has part: feature:560108-560393:-1:exon
so has part: feature:559432-559491:-1:exon
so has part: feature:559107-559120:-1:exon

XP_012955069.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:565827-565897:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:563391-563643:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:562505-562732:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:560971-561099:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:560108-560393:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:559432-559491:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:559107-559120:-1:exon

LOC106017129
type: Gene
subclass of: SO_0000704
RO_0002162: 8839
gene: LOC106017129
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 573017..576569
location: region:573017-576569:1
so has part: feature:573017-576569:1:exon
subclass of: SO_0000010

106017129
type: Gene
SIO_000068: ncbigene

position:573017:1
position: 573017
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:576569:1
position: 576569
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:573017-576569:1:exon

LOC106017129
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8839
gene: LOC106017129
product: TIR domain containing adaptor protein, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 78 samples with support for all annotated introns
transcript id: XM_013099618.4
SIO_010081: LOC106017129
subclass of: SO_0000673
so part of: LOC106017129
location: join(573017..573395,574009..574097,574815..574869,575346..575837,576023..576569)
location: region:573017-576569:1
so has part: feature:573017-573395:1:exon
so has part: feature:574009-574097:1:exon
so has part: feature:574815-574869:1:exon
so has part: feature:575346-575837:1:exon
so has part: feature:576023-576569:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:573017-573395:1:exon

position:573395:1
position: 573395
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:574009-574097:1:exon

position:574009:1
position: 574009
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:574097:1
position: 574097
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:574815-574869:1:exon

position:574815:1
position: 574815
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:574869:1
position: 574869
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:575346-575837:1:exon

position:575346:1
position: 575346
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:575837:1
position: 575837
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:576023-576569:1:exon

position:576023:1
position: 576023
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC106017129
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8839
gene: LOC106017129
product: TIR domain containing adaptor protein, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 112 samples with support for all annotated introns
transcript id: XM_013099617.4
SIO_010081: LOC106017129
subclass of: SO_0000673
so part of: LOC106017129
location: join(573020..573395,574009..574097,574815..574869,575232..575837,576023..576569)
location: region:573020-576569:1
so has part: feature:573020-573395:1:exon
so has part: feature:574009-574097:1:exon
so has part: feature:574815-574869:1:exon
so has part: feature:575232-575837:1:exon
so has part: feature:576023-576569:1:exon

position:573020:1
position: 573020
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:573020-573395:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:574009-574097:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:574815-574869:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:575232-575837:1:exon

position:575232:1
position: 575232
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:576023-576569:1:exon

LOC106017129
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8839
gene: LOC106017129
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: toll/interleukin-1 receptor domain-containing adapter protein isoform X1
translation: MAGWFRRLLQKPRQSSSCTGSSQNASTGCSASSSPSSSSSARSSSSSAGTAMPRAGRPAAVDISSSGSARWAKSYDVCICHSEVDLEFVEELVSYLESQPQSFRCFLQLRDAVAGSAIMTELCDAVQNSHCWVMLITPSFLQDPWCKYQMHQALAEAPMANGRTIPVLKDIDRKDYPRELRNLYYISTVLKENSFRQIRDTVLHYLEELCRSSASGTEQ
SIO_010081: LOC106017129
subclass of: SO_0000673
so part of: LOC106017129
location: join(574863..574869,575232..575837,576023..576069)
location: region:574863-576069:1
so has part: feature:574863-574869:1:exon
so has part: feature:575232-575837:1:exon
so has part: feature:576023-576069:1:exon

XP_012955071.3
type: Protein
SIO_000068: ncbiprotein

position:574863:1
position: 574863
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:576069:1
position: 576069
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:574863-574869:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:575232-575837:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:576023-576069:1:exon

LOC106017129
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8839
gene: LOC106017129
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: toll/interleukin-1 receptor domain-containing adapter protein isoform X2
translation: MAARSSSSSAGTAMPRAGRPAAVDISSSGSARWAKSYDVCICHSEVDLEFVEELVSYLESQPQSFRCFLQLRDAVAGSAIMTELCDAVQNSHCWVMLITPSFLQDPWCKYQMHQALAEAPMANGRTIPVLKDIDRKDYPRELRNLYYISTVLKENSFRQIRDTVLHYLEELCRSSASGTEQ
SIO_010081: LOC106017129
subclass of: SO_0000673
so part of: LOC106017129
location: join(574863..574869,575346..575837,576023..576069)
location: region:574863-576069:1
so has part: feature:574863-574869:1:exon
so has part: feature:575346-575837:1:exon
so has part: feature:576023-576069:1:exon

XP_012955072.3
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:574863-574869:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:575346-575837:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:576023-576069:1:exon

DCPS
type: Gene
subclass of: SO_0000704
RO_0002162: 8839
gene: DCPS
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 577337..601934
location: region:577337-601934:1
so has part: feature:577337-601934:1:exon
subclass of: SO_0000010

101792448
type: Gene
SIO_000068: ncbigene

position:577337:1
position: 577337
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:601934:1
position: 601934
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:577337-601934:1:exon

DCPS
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8839
gene: DCPS
product: decapping enzyme, scavenger
exception: unclassified transcription discrepancy
note: The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: deleted 2 bases in 2 codons; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 94% coverage of the annotated genomic feature by RNAseq alignments, including 126 samples with support for all annotated introns
transcript id: XM_027444267.2
SIO_010081: DCPS
subclass of: SO_0000673
so part of: DCPS
location: join(577337..577571,577719..577888,587537..587683,594325..594438,599345..599455,601482..601934)
location: region:577337-601934:1
so has part: feature:577337-577571:1:exon
so has part: feature:577719-577888:1:exon
so has part: feature:587537-587683:1:exon
so has part: feature:594325-594438:1:exon
so has part: feature:599345-599455:1:exon
so has part: feature:601482-601934:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:577337-577571:1:exon

position:577571:1
position: 577571
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:577719-577888:1:exon

position:577719:1
position: 577719
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:577888:1
position: 577888
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:587537-587683:1:exon

position:587537:1
position: 587537
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:587683:1
position: 587683
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:594325-594438:1:exon

position:594325:1
position: 594325
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:594438:1
position: 594438
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:599345-599455:1:exon

position:599345:1
position: 599345
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:599455:1
position: 599455
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:601482-601934:1:exon

position:601482:1
position: 601482
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

DCPS
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8839
gene: DCPS
exception: unclassified translation discrepancy
note: The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: deleted 2 bases in 2 codons; Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: LOW QUALITY PROTEIN: m7GpppX diphosphatase
translation: MAEGPEPKRRRAEAGDGDGVAAGNGAEAEAGAGAGAGAEPGPGAPFPLSSVRLRRLLRDSAREKAAFVHGQVTGPSGEDTDAVLILEKTPFQEEKIEELLRKHTKLELQMANDIYSTYRLYPPPELSEIKTTVVYPATEKHLQKYLRQEVHLIRESWEDYKNITLPFIQSQSFSIQWVYNILEKKAEADRIIHENQDPSNGFVLVPDFKWNQNQLYDLYLIALVQRRDVKSLRDLTAEHLPLLKNILQEGKEAIAKRFGVPGSQLRIYLHYQPSYYHLHVHFTALGYDAPGTSVERAHLLADVIDNLVLDSSYYQKRALTFALRADEPLLKKFQEAGRV
SIO_010081: DCPS
subclass of: SO_0000673
so part of: DCPS
location: join(577359..577571,577719..577888,587537..587683,594325..594438,599345..599455,601482..601748)
location: region:577359-601748:1
so has part: feature:577359-577571:1:exon
so has part: feature:577719-577888:1:exon
so has part: feature:587537-587683:1:exon
so has part: feature:594325-594438:1:exon
so has part: feature:599345-599455:1:exon
so has part: feature:601482-601748:1:exon

XP_027300068.2
type: Protein
SIO_000068: ncbiprotein

position:577359:1
position: 577359
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:601748:1
position: 601748
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:577359-577571:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:577719-577888:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:587537-587683:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:594325-594438:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:599345-599455:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:601482-601748:1:exon

ST3GAL4
type: Gene
subclass of: SO_0000704
RO_0002162: 8839
gene: ST3GAL4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 607100..631639
location: region:607100-631639:1
so has part: feature:607100-631639:1:exon
subclass of: SO_0000010

101792642
type: Gene
SIO_000068: ncbigene

position:607100:1
position: 607100
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:631639:1
position: 631639
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:607100-631639:1:exon

ST3GAL4
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8839
gene: ST3GAL4
product: ST3 beta-galactoside alpha-2,3-sialyltransferase 4, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 81 samples with support for all annotated introns
transcript id: XM_027444100.2
SIO_010081: ST3GAL4
subclass of: SO_0000673
so part of: ST3GAL4
location: join(607100..607159,614847..614987,618578..618653,625582..625660,627680..627761,628147..628227,628310..628407,628793..628853,629190..629285,629406..629595,629726..629869,630220..630363,630563..631639)
location: region:607100-631639:1
so has part: feature:607100-607159:1:exon
so has part: feature:614847-614987:1:exon
so has part: feature:618578-618653:1:exon
so has part: feature:625582-625660:1:exon
so has part: feature:627680-627761:1:exon
so has part: feature:628147-628227:1:exon
so has part: feature:628310-628407:1:exon
so has part: feature:628793-628853:1:exon
so has part: feature:629190-629285:1:exon
so has part: feature:629406-629595:1:exon
so has part: feature:629726-629869:1:exon
so has part: feature:630220-630363:1:exon
so has part: feature:630563-631639:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:607100-607159:1:exon

position:607159:1
position: 607159
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:614847-614987:1:exon

position:614847:1
position: 614847
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:614987:1
position: 614987
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:618578-618653:1:exon

position:618578:1
position: 618578
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:618653:1
position: 618653
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:625582-625660:1:exon

position:625582:1
position: 625582
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:625660:1
position: 625660
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:627680-627761:1:exon

position:627680:1
position: 627680
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:627761:1
position: 627761
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:628147-628227:1:exon

position:628147:1
position: 628147
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:628227:1
position: 628227
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:628310-628407:1:exon

position:628310:1
position: 628310
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:628407:1
position: 628407
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:628793-628853:1:exon

position:628793:1
position: 628793
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:628853:1
position: 628853
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:629190-629285:1:exon

position:629190:1
position: 629190
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:629285:1
position: 629285
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:629406-629595:1:exon

position:629406:1
position: 629406
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:629595:1
position: 629595
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:629726-629869:1:exon

position:629726:1
position: 629726
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:629869:1
position: 629869
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:630220-630363:1:exon

position:630220:1
position: 630220
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:630363:1
position: 630363
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:630563-631639:1:exon

position:630563:1
position: 630563
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

ST3GAL4
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8839
gene: ST3GAL4
product: ST3 beta-galactoside alpha-2,3-sialyltransferase 4, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 66 samples with support for all annotated introns
transcript id: XM_027444098.2
SIO_010081: ST3GAL4
subclass of: SO_0000673
so part of: ST3GAL4
location: join(607106..607159,618578..618653,625582..625660,627680..627761,628147..628227,628310..628407,628793..628853,629190..629285,629406..629595,629726..629869,630220..630363,630563..631639)
location: region:607106-631639:1
so has part: feature:607106-607159:1:exon
so has part: feature:618578-618653:1:exon
so has part: feature:625582-625660:1:exon
so has part: feature:627680-627761:1:exon
so has part: feature:628147-628227:1:exon
so has part: feature:628310-628407:1:exon
so has part: feature:628793-628853:1:exon
so has part: feature:629190-629285:1:exon
so has part: feature:629406-629595:1:exon
so has part: feature:629726-629869:1:exon
so has part: feature:630220-630363:1:exon
so has part: feature:630563-631639:1:exon

position:607106:1
position: 607106
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:607106-607159:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:618578-618653:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:625582-625660:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:627680-627761:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:628147-628227:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:628310-628407:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:628793-628853:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:629190-629285:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:629406-629595:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:629726-629869:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:630220-630363:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:630563-631639:1:exon

ST3GAL4
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8839
gene: ST3GAL4
product: ST3 beta-galactoside alpha-2,3-sialyltransferase 4, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 81 samples with support for all annotated introns
transcript id: XM_027444099.2
SIO_010081: ST3GAL4
subclass of: SO_0000673
so part of: ST3GAL4
location: join(607108..607159,618578..618653,625582..625660,627680..627749,628147..628227,628310..628407,628793..628853,629190..629285,629406..629595,629726..629869,630220..630363,630563..631639)
location: region:607108-631639:1
so has part: feature:607108-607159:1:exon
so has part: feature:618578-618653:1:exon
so has part: feature:625582-625660:1:exon
so has part: feature:627680-627749:1:exon
so has part: feature:628147-628227:1:exon
so has part: feature:628310-628407:1:exon
so has part: feature:628793-628853:1:exon
so has part: feature:629190-629285:1:exon
so has part: feature:629406-629595:1:exon
so has part: feature:629726-629869:1:exon
so has part: feature:630220-630363:1:exon
so has part: feature:630563-631639:1:exon

position:607108:1
position: 607108
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:607108-607159:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:618578-618653:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:625582-625660:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:627680-627749:1:exon

position:627749:1
position: 627749
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:628147-628227:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:628310-628407:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:628793-628853:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:629190-629285:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:629406-629595:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:629726-629869:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:630220-630363:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:630563-631639:1:exon

ST3GAL4
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8839
gene: ST3GAL4
product: ST3 beta-galactoside alpha-2,3-sialyltransferase 4, transcript variant X9
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 66 samples with support for all annotated introns
transcript id: XM_027444102.2
SIO_010081: ST3GAL4
subclass of: SO_0000673
so part of: ST3GAL4
location: join(607115..607159,618578..618653,624828..624960,625582..625660,627680..627761,628147..628227,628310..628407,628793..628853,629190..629285,629406..629595,629726..629869,630220..630363,630563..631639)
location: region:607115-631639:1
so has part: feature:607115-607159:1:exon
so has part: feature:618578-618653:1:exon
so has part: feature:624828-624960:1:exon
so has part: feature:625582-625660:1:exon
so has part: feature:627680-627761:1:exon
so has part: feature:628147-628227:1:exon
so has part: feature:628310-628407:1:exon
so has part: feature:628793-628853:1:exon
so has part: feature:629190-629285:1:exon
so has part: feature:629406-629595:1:exon
so has part: feature:629726-629869:1:exon
so has part: feature:630220-630363:1:exon
so has part: feature:630563-631639:1:exon

position:607115:1
position: 607115
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:607115-607159:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:618578-618653:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:624828-624960:1:exon

position:624828:1
position: 624828
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:624960:1
position: 624960
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:625582-625660:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:627680-627761:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:628147-628227:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:628310-628407:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:628793-628853:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:629190-629285:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:629406-629595:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:629726-629869:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:630220-630363:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:630563-631639:1:exon

ST3GAL4
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8839
gene: ST3GAL4
product: ST3 beta-galactoside alpha-2,3-sialyltransferase 4, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 42 samples with support for all annotated introns
transcript id: XM_027444101.2
SIO_010081: ST3GAL4
subclass of: SO_0000673
so part of: ST3GAL4
location: join(607217..607349,614847..614987,618578..618653,625582..625660,627680..627761,628147..628227,628310..628407,628793..628853,629190..629285,629406..629595,629726..629869,630220..630363,630563..631639)
location: region:607217-631639:1
so has part: feature:607217-607349:1:exon
so has part: feature:614847-614987:1:exon
so has part: feature:618578-618653:1:exon
so has part: feature:625582-625660:1:exon
so has part: feature:627680-627761:1:exon
so has part: feature:628147-628227:1:exon
so has part: feature:628310-628407:1:exon
so has part: feature:628793-628853:1:exon
so has part: feature:629190-629285:1:exon
so has part: feature:629406-629595:1:exon
so has part: feature:629726-629869:1:exon
so has part: feature:630220-630363:1:exon
so has part: feature:630563-631639:1:exon

position:607217:1
position: 607217
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:607217-607349:1:exon

position:607349:1
position: 607349
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:614847-614987:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:618578-618653:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:625582-625660:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:627680-627761:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:628147-628227:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:628310-628407:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:628793-628853:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:629190-629285:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:629406-629595:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:629726-629869:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:630220-630363:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:630563-631639:1:exon

ST3GAL4
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8839
gene: ST3GAL4
product: ST3 beta-galactoside alpha-2,3-sialyltransferase 4, transcript variant X7
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
transcript id: XM_038167537.1
SIO_010081: ST3GAL4
subclass of: SO_0000673
so part of: ST3GAL4
location: join(614340..614358,614847..614987,618578..618653,625582..625660,627680..627761,628147..628227,628310..628407,628793..628853,629190..629285,629406..629595,629726..629869,630220..630363,630563..631639)
location: region:614340-631639:1
so has part: feature:614340-614358:1:exon
so has part: feature:614847-614987:1:exon
so has part: feature:618578-618653:1:exon
so has part: feature:625582-625660:1:exon
so has part: feature:627680-627761:1:exon
so has part: feature:628147-628227:1:exon
so has part: feature:628310-628407:1:exon
so has part: feature:628793-628853:1:exon
so has part: feature:629190-629285:1:exon
so has part: feature:629406-629595:1:exon
so has part: feature:629726-629869:1:exon
so has part: feature:630220-630363:1:exon
so has part: feature:630563-631639:1:exon

position:614340:1
position: 614340
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:614340-614358:1:exon

position:614358:1
position: 614358
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:614847-614987:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:618578-618653:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:625582-625660:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:627680-627761:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:628147-628227:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:628310-628407:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:628793-628853:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:629190-629285:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:629406-629595:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:629726-629869:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:630220-630363:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:630563-631639:1:exon

ST3GAL4
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8839
gene: ST3GAL4
product: ST3 beta-galactoside alpha-2,3-sialyltransferase 4, transcript variant X6
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 9 samples with support for all annotated introns
transcript id: XM_038167536.1
SIO_010081: ST3GAL4
subclass of: SO_0000673
so part of: ST3GAL4
location: join(614482..614500,614847..614987,618578..618653,625582..625660,627680..627761,628147..628227,628310..628407,628793..628853,629190..629285,629406..629595,629726..629869,630220..630363,630563..631639)
location: region:614482-631639:1
so has part: feature:614482-614500:1:exon
so has part: feature:614847-614987:1:exon
so has part: feature:618578-618653:1:exon
so has part: feature:625582-625660:1:exon
so has part: feature:627680-627761:1:exon
so has part: feature:628147-628227:1:exon
so has part: feature:628310-628407:1:exon
so has part: feature:628793-628853:1:exon
so has part: feature:629190-629285:1:exon
so has part: feature:629406-629595:1:exon
so has part: feature:629726-629869:1:exon
so has part: feature:630220-630363:1:exon
so has part: feature:630563-631639:1:exon

position:614482:1
position: 614482
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:614482-614500:1:exon

position:614500:1
position: 614500
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:614847-614987:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:618578-618653:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:625582-625660:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:627680-627761:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:628147-628227:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:628310-628407:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:628793-628853:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:629190-629285:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:629406-629595:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:629726-629869:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:630220-630363:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:630563-631639:1:exon

ST3GAL4
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8839
gene: ST3GAL4
product: ST3 beta-galactoside alpha-2,3-sialyltransferase 4, transcript variant X5
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 15 samples with support for all annotated introns
transcript id: XM_038167535.1
SIO_010081: ST3GAL4
subclass of: SO_0000673
so part of: ST3GAL4
location: join(614491..614511,614847..614987,618578..618653,625582..625660,627680..627761,628147..628227,628310..628407,628793..628853,629190..629285,629406..629595,629726..629869,630220..630363,630563..631639)
location: region:614491-631639:1
so has part: feature:614491-614511:1:exon
so has part: feature:614847-614987:1:exon
so has part: feature:618578-618653:1:exon
so has part: feature:625582-625660:1:exon
so has part: feature:627680-627761:1:exon
so has part: feature:628147-628227:1:exon
so has part: feature:628310-628407:1:exon
so has part: feature:628793-628853:1:exon
so has part: feature:629190-629285:1:exon
so has part: feature:629406-629595:1:exon
so has part: feature:629726-629869:1:exon
so has part: feature:630220-630363:1:exon
so has part: feature:630563-631639:1:exon

position:614491:1
position: 614491
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:614491-614511:1:exon

position:614511:1
position: 614511
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:614847-614987:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:618578-618653:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:625582-625660:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:627680-627761:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:628147-628227:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:628310-628407:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:628793-628853:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:629190-629285:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:629406-629595:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:629726-629869:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:630220-630363:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:630563-631639:1:exon

ST3GAL4
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8839
gene: ST3GAL4
product: ST3 beta-galactoside alpha-2,3-sialyltransferase 4, transcript variant X8
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 83 samples with support for all annotated introns
transcript id: XM_021272486.3
SIO_010081: ST3GAL4
subclass of: SO_0000673
so part of: ST3GAL4
location: join(614921..614987,618578..618653,624828..624960,625582..625660,627680..627761,628147..628227,628310..628407,628793..628853,629190..629285,629406..629595,629726..629869,630220..630363,630563..631639)
location: region:614921-631639:1
so has part: feature:614921-614987:1:exon
so has part: feature:618578-618653:1:exon
so has part: feature:624828-624960:1:exon
so has part: feature:625582-625660:1:exon
so has part: feature:627680-627761:1:exon
so has part: feature:628147-628227:1:exon
so has part: feature:628310-628407:1:exon
so has part: feature:628793-628853:1:exon
so has part: feature:629190-629285:1:exon
so has part: feature:629406-629595:1:exon
so has part: feature:629726-629869:1:exon
so has part: feature:630220-630363:1:exon
so has part: feature:630563-631639:1:exon

position:614921:1
position: 614921
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:614921-614987:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:618578-618653:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:624828-624960:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:625582-625660:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:627680-627761:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:628147-628227:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:628310-628407:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:628793-628853:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:629190-629285:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:629406-629595:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:629726-629869:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:630220-630363:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:630563-631639:1:exon

ST3GAL4
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8839
gene: ST3GAL4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: CMP-N-acetylneuraminate-beta-galactosamide- alpha-2,3-sialyltransferase 4 isoform X3
translation: MNKGKCNHQLDGGREDGPVDPQPLETLSPLLASQGRTVTGGSRDESSGPRLMPALAIKMINKSRGKILGVLALFLVMVWYSIYREDRYIQLFYFPMQENKTVCPVGEVERKAAQLIGNYTRDHPLFLQLKDYFWVKTPSLYELPYGTKGSEDVLLRLLSVTSYSLPESIQSLKCRRCAVVGNGHRLRNSSMGETINTYDVVIRLNNAPVHGYEQDVGSKTTMRLFYPESAHFNPRTENNPDTLLVLVPFKPMDFQWMEAILNDKKRVRKGFWKQPPLIWDANPEQVRILNPYYMEVTAAKLLNLPMKQPRKVKQKPTTGLLAITLALHFCDLVHIAGFGYPDSANKKQTIHYYEQITLKSMAASEHNVSHEAVAIKRMLELGLVKNLTYF
SIO_010081: ST3GAL4
subclass of: SO_0000673
so part of: ST3GAL4
location: join(614953..614987,618578..618653,625582..625660,627680..627761,628147..628227,628310..628407,628793..628853,629190..629285,629406..629595,629726..629869,630220..630363,630563..630649)
location: region:614953-630649:1
so has part: feature:614953-614987:1:exon
so has part: feature:618578-618653:1:exon
so has part: feature:625582-625660:1:exon
so has part: feature:627680-627761:1:exon
so has part: feature:628147-628227:1:exon
so has part: feature:628310-628407:1:exon
so has part: feature:628793-628853:1:exon
so has part: feature:629190-629285:1:exon
so has part: feature:629406-629595:1:exon
so has part: feature:629726-629869:1:exon
so has part: feature:630220-630363:1:exon
so has part: feature:630563-630649:1:exon

XP_027299901.1
type: Protein
SIO_000068: ncbiprotein

position:614953:1
position: 614953
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:630649:1
position: 630649
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:614953-614987:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:618578-618653:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:625582-625660:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:627680-627761:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:628147-628227:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:628310-628407:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:628793-628853:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:629190-629285:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:629406-629595:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:629726-629869:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:630220-630363:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:630563-630649:1:exon

ST3GAL4
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8839
gene: ST3GAL4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: CMP-N-acetylneuraminate-beta-galactosamide- alpha-2,3-sialyltransferase 4 isoform X3
translation: MNKGKCNHQLDGGREDGPVDPQPLETLSPLLASQGRTVTGGSRDESSGPRLMPALAIKMINKSRGKILGVLALFLVMVWYSIYREDRYIQLFYFPMQENKTVCPVGEVERKAAQLIGNYTRDHPLFLQLKDYFWVKTPSLYELPYGTKGSEDVLLRLLSVTSYSLPESIQSLKCRRCAVVGNGHRLRNSSMGETINTYDVVIRLNNAPVHGYEQDVGSKTTMRLFYPESAHFNPRTENNPDTLLVLVPFKPMDFQWMEAILNDKKRVRKGFWKQPPLIWDANPEQVRILNPYYMEVTAAKLLNLPMKQPRKVKQKPTTGLLAITLALHFCDLVHIAGFGYPDSANKKQTIHYYEQITLKSMAASEHNVSHEAVAIKRMLELGLVKNLTYF
SIO_010081: ST3GAL4
subclass of: SO_0000673
so part of: ST3GAL4
location: join(614953..614987,618578..618653,625582..625660,627680..627761,628147..628227,628310..628407,628793..628853,629190..629285,629406..629595,629726..629869,630220..630363,630563..630649)
location: region:614953-630649:1
so has part: feature:614953-614987:1:exon
so has part: feature:618578-618653:1:exon
so has part: feature:625582-625660:1:exon
so has part: feature:627680-627761:1:exon
so has part: feature:628147-628227:1:exon
so has part: feature:628310-628407:1:exon
so has part: feature:628793-628853:1:exon
so has part: feature:629190-629285:1:exon
so has part: feature:629406-629595:1:exon
so has part: feature:629726-629869:1:exon
so has part: feature:630220-630363:1:exon
so has part: feature:630563-630649:1:exon

XP_027299902.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:614953-614987:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:618578-618653:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:625582-625660:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:627680-627761:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:628147-628227:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:628310-628407:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:628793-628853:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:629190-629285:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:629406-629595:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:629726-629869:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:630220-630363:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:630563-630649:1:exon

ST3GAL4
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8839
gene: ST3GAL4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: CMP-N-acetylneuraminate-beta-galactosamide- alpha-2,3-sialyltransferase 4 isoform X3
translation: MNKGKCNHQLDGGREDGPVDPQPLETLSPLLASQGRTVTGGSRDESSGPRLMPALAIKMINKSRGKILGVLALFLVMVWYSIYREDRYIQLFYFPMQENKTVCPVGEVERKAAQLIGNYTRDHPLFLQLKDYFWVKTPSLYELPYGTKGSEDVLLRLLSVTSYSLPESIQSLKCRRCAVVGNGHRLRNSSMGETINTYDVVIRLNNAPVHGYEQDVGSKTTMRLFYPESAHFNPRTENNPDTLLVLVPFKPMDFQWMEAILNDKKRVRKGFWKQPPLIWDANPEQVRILNPYYMEVTAAKLLNLPMKQPRKVKQKPTTGLLAITLALHFCDLVHIAGFGYPDSANKKQTIHYYEQITLKSMAASEHNVSHEAVAIKRMLELGLVKNLTYF
SIO_010081: ST3GAL4
subclass of: SO_0000673
so part of: ST3GAL4
location: join(614953..614987,618578..618653,625582..625660,627680..627761,628147..628227,628310..628407,628793..628853,629190..629285,629406..629595,629726..629869,630220..630363,630563..630649)
location: region:614953-630649:1
so has part: feature:614953-614987:1:exon
so has part: feature:618578-618653:1:exon
so has part: feature:625582-625660:1:exon
so has part: feature:627680-627761:1:exon
so has part: feature:628147-628227:1:exon
so has part: feature:628310-628407:1:exon
so has part: feature:628793-628853:1:exon
so has part: feature:629190-629285:1:exon
so has part: feature:629406-629595:1:exon
so has part: feature:629726-629869:1:exon
so has part: feature:630220-630363:1:exon
so has part: feature:630563-630649:1:exon

XP_038023463.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:614953-614987:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:618578-618653:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:625582-625660:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:627680-627761:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:628147-628227:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:628310-628407:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:628793-628853:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:629190-629285:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:629406-629595:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:629726-629869:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:630220-630363:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:630563-630649:1:exon

ST3GAL4
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8839
gene: ST3GAL4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: CMP-N-acetylneuraminate-beta-galactosamide- alpha-2,3-sialyltransferase 4 isoform X3
translation: MNKGKCNHQLDGGREDGPVDPQPLETLSPLLASQGRTVTGGSRDESSGPRLMPALAIKMINKSRGKILGVLALFLVMVWYSIYREDRYIQLFYFPMQENKTVCPVGEVERKAAQLIGNYTRDHPLFLQLKDYFWVKTPSLYELPYGTKGSEDVLLRLLSVTSYSLPESIQSLKCRRCAVVGNGHRLRNSSMGETINTYDVVIRLNNAPVHGYEQDVGSKTTMRLFYPESAHFNPRTENNPDTLLVLVPFKPMDFQWMEAILNDKKRVRKGFWKQPPLIWDANPEQVRILNPYYMEVTAAKLLNLPMKQPRKVKQKPTTGLLAITLALHFCDLVHIAGFGYPDSANKKQTIHYYEQITLKSMAASEHNVSHEAVAIKRMLELGLVKNLTYF
SIO_010081: ST3GAL4
subclass of: SO_0000673
so part of: ST3GAL4
location: join(614953..614987,618578..618653,625582..625660,627680..627761,628147..628227,628310..628407,628793..628853,629190..629285,629406..629595,629726..629869,630220..630363,630563..630649)
location: region:614953-630649:1
so has part: feature:614953-614987:1:exon
so has part: feature:618578-618653:1:exon
so has part: feature:625582-625660:1:exon
so has part: feature:627680-627761:1:exon
so has part: feature:628147-628227:1:exon
so has part: feature:628310-628407:1:exon
so has part: feature:628793-628853:1:exon
so has part: feature:629190-629285:1:exon
so has part: feature:629406-629595:1:exon
so has part: feature:629726-629869:1:exon
so has part: feature:630220-630363:1:exon
so has part: feature:630563-630649:1:exon

XP_038023464.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:614953-614987:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:618578-618653:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:625582-625660:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:627680-627761:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:628147-628227:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:628310-628407:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:628793-628853:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:629190-629285:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:629406-629595:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:629726-629869:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:630220-630363:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:630563-630649:1:exon

ST3GAL4
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8839
gene: ST3GAL4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: CMP-N-acetylneuraminate-beta-galactosamide- alpha-2,3-sialyltransferase 4 isoform X3
translation: MNKGKCNHQLDGGREDGPVDPQPLETLSPLLASQGRTVTGGSRDESSGPRLMPALAIKMINKSRGKILGVLALFLVMVWYSIYREDRYIQLFYFPMQENKTVCPVGEVERKAAQLIGNYTRDHPLFLQLKDYFWVKTPSLYELPYGTKGSEDVLLRLLSVTSYSLPESIQSLKCRRCAVVGNGHRLRNSSMGETINTYDVVIRLNNAPVHGYEQDVGSKTTMRLFYPESAHFNPRTENNPDTLLVLVPFKPMDFQWMEAILNDKKRVRKGFWKQPPLIWDANPEQVRILNPYYMEVTAAKLLNLPMKQPRKVKQKPTTGLLAITLALHFCDLVHIAGFGYPDSANKKQTIHYYEQITLKSMAASEHNVSHEAVAIKRMLELGLVKNLTYF
SIO_010081: ST3GAL4
subclass of: SO_0000673
so part of: ST3GAL4
location: join(614953..614987,618578..618653,625582..625660,627680..627761,628147..628227,628310..628407,628793..628853,629190..629285,629406..629595,629726..629869,630220..630363,630563..630649)
location: region:614953-630649:1
so has part: feature:614953-614987:1:exon
so has part: feature:618578-618653:1:exon
so has part: feature:625582-625660:1:exon
so has part: feature:627680-627761:1:exon
so has part: feature:628147-628227:1:exon
so has part: feature:628310-628407:1:exon
so has part: feature:628793-628853:1:exon
so has part: feature:629190-629285:1:exon
so has part: feature:629406-629595:1:exon
so has part: feature:629726-629869:1:exon
so has part: feature:630220-630363:1:exon
so has part: feature:630563-630649:1:exon

XP_038023465.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:614953-614987:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:618578-618653:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:625582-625660:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:627680-627761:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:628147-628227:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:628310-628407:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:628793-628853:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:629190-629285:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:629406-629595:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:629726-629869:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:630220-630363:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:630563-630649:1:exon

ST3GAL4
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8839
gene: ST3GAL4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: CMP-N-acetylneuraminate-beta-galactosamide- alpha-2,3-sialyltransferase 4 isoform X4
translation: MLESKALEVSQVTGGSRDESSGPRLMPALAIKMINKSRGKILGVLALFLVMVWYSIYREDRYIQLFYFPMQENKTVCPVGEVERKAAQLIGNYTRDHPLFLQLKDYFWVKTPSLYELPYGTKGSEDVLLRLLSVTSYSLPESIQSLKCRRCAVVGNGHRLRNSSMGETINTYDVVIRLNNAPVHGYEQDVGSKTTMRLFYPESAHFNPRTENNPDTLLVLVPFKPMDFQWMEAILNDKKRVRKGFWKQPPLIWDANPEQVRILNPYYMEVTAAKLLNLPMKQPRKVKQKPTTGLLAITLALHFCDLVHIAGFGYPDSANKKQTIHYYEQITLKSMAASEHNVSHEAVAIKRMLELGLVKNLTYF
SIO_010081: ST3GAL4
subclass of: SO_0000673
so part of: ST3GAL4
location: join(624928..624960,625582..625660,627680..627761,628147..628227,628310..628407,628793..628853,629190..629285,629406..629595,629726..629869,630220..630363,630563..630649)
location: region:624928-630649:1
so has part: feature:624928-624960:1:exon
so has part: feature:625582-625660:1:exon
so has part: feature:627680-627761:1:exon
so has part: feature:628147-628227:1:exon
so has part: feature:628310-628407:1:exon
so has part: feature:628793-628853:1:exon
so has part: feature:629190-629285:1:exon
so has part: feature:629406-629595:1:exon
so has part: feature:629726-629869:1:exon
so has part: feature:630220-630363:1:exon
so has part: feature:630563-630649:1:exon

XP_021128161.1
type: Protein
SIO_000068: ncbiprotein

position:624928:1
position: 624928
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:624928-624960:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:625582-625660:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:627680-627761:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:628147-628227:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:628310-628407:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:628793-628853:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:629190-629285:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:629406-629595:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:629726-629869:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:630220-630363:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:630563-630649:1:exon

ST3GAL4
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8839
gene: ST3GAL4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: CMP-N-acetylneuraminate-beta-galactosamide- alpha-2,3-sialyltransferase 4 isoform X4
translation: MLESKALEVSQVTGGSRDESSGPRLMPALAIKMINKSRGKILGVLALFLVMVWYSIYREDRYIQLFYFPMQENKTVCPVGEVERKAAQLIGNYTRDHPLFLQLKDYFWVKTPSLYELPYGTKGSEDVLLRLLSVTSYSLPESIQSLKCRRCAVVGNGHRLRNSSMGETINTYDVVIRLNNAPVHGYEQDVGSKTTMRLFYPESAHFNPRTENNPDTLLVLVPFKPMDFQWMEAILNDKKRVRKGFWKQPPLIWDANPEQVRILNPYYMEVTAAKLLNLPMKQPRKVKQKPTTGLLAITLALHFCDLVHIAGFGYPDSANKKQTIHYYEQITLKSMAASEHNVSHEAVAIKRMLELGLVKNLTYF
SIO_010081: ST3GAL4
subclass of: SO_0000673
so part of: ST3GAL4
location: join(624928..624960,625582..625660,627680..627761,628147..628227,628310..628407,628793..628853,629190..629285,629406..629595,629726..629869,630220..630363,630563..630649)
location: region:624928-630649:1
so has part: feature:624928-624960:1:exon
so has part: feature:625582-625660:1:exon
so has part: feature:627680-627761:1:exon
so has part: feature:628147-628227:1:exon
so has part: feature:628310-628407:1:exon
so has part: feature:628793-628853:1:exon
so has part: feature:629190-629285:1:exon
so has part: feature:629406-629595:1:exon
so has part: feature:629726-629869:1:exon
so has part: feature:630220-630363:1:exon
so has part: feature:630563-630649:1:exon

XP_027299903.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:624928-624960:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:625582-625660:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:627680-627761:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:628147-628227:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:628310-628407:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:628793-628853:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:629190-629285:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:629406-629595:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:629726-629869:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:630220-630363:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:630563-630649:1:exon

ST3GAL4
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8839
gene: ST3GAL4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: CMP-N-acetylneuraminate-beta-galactosamide- alpha-2,3-sialyltransferase 4 isoform X1
translation: MPALAIKMINKSRGKILGVLALFLVMVWYSIYREDRYIQLFYFPMQENKTVCPVGEVERKAAQLIGNYTRDHPLFLQLKDYFWVKTPSLYELPYGTKGSEDVLLRLLSVTSYSLPESIQSLKCRRCAVVGNGHRLRNSSMGETINTYDVVIRLNNAPVHGYEQDVGSKTTMRLFYPESAHFNPRTENNPDTLLVLVPFKPMDFQWMEAILNDKKRVRKGFWKQPPLIWDANPEQVRILNPYYMEVTAAKLLNLPMKQPRKVKQKPTTGLLAITLALHFCDLVHIAGFGYPDSANKKQTIHYYEQITLKSMAASEHNVSHEAVAIKRMLELGLVKNLTYF
SIO_010081: ST3GAL4
subclass of: SO_0000673
so part of: ST3GAL4
location: join(625624..625660,627680..627761,628147..628227,628310..628407,628793..628853,629190..629285,629406..629595,629726..629869,630220..630363,630563..630649)
location: region:625624-630649:1
so has part: feature:625624-625660:1:exon
so has part: feature:627680-627761:1:exon
so has part: feature:628147-628227:1:exon
so has part: feature:628310-628407:1:exon
so has part: feature:628793-628853:1:exon
so has part: feature:629190-629285:1:exon
so has part: feature:629406-629595:1:exon
so has part: feature:629726-629869:1:exon
so has part: feature:630220-630363:1:exon
so has part: feature:630563-630649:1:exon

XP_027299899.1
type: Protein
SIO_000068: ncbiprotein

position:625624:1
position: 625624
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:625624-625660:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:627680-627761:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:628147-628227:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:628310-628407:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:628793-628853:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:629190-629285:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:629406-629595:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:629726-629869:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:630220-630363:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:630563-630649:1:exon

ST3GAL4
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8839
gene: ST3GAL4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: CMP-N-acetylneuraminate-beta-galactosamide- alpha-2,3-sialyltransferase 4 isoform X2
translation: MPALAIKMINKSRGKILGVLALFLVMVWYSIYREDSFYFPMQENKTVCPVGEVERKAAQLIGNYTRDHPLFLQLKDYFWVKTPSLYELPYGTKGSEDVLLRLLSVTSYSLPESIQSLKCRRCAVVGNGHRLRNSSMGETINTYDVVIRLNNAPVHGYEQDVGSKTTMRLFYPESAHFNPRTENNPDTLLVLVPFKPMDFQWMEAILNDKKRVRKGFWKQPPLIWDANPEQVRILNPYYMEVTAAKLLNLPMKQPRKVKQKPTTGLLAITLALHFCDLVHIAGFGYPDSANKKQTIHYYEQITLKSMAASEHNVSHEAVAIKRMLELGLVKNLTYF
SIO_010081: ST3GAL4
subclass of: SO_0000673
so part of: ST3GAL4
location: join(625624..625660,627680..627749,628147..628227,628310..628407,628793..628853,629190..629285,629406..629595,629726..629869,630220..630363,630563..630649)
location: region:625624-630649:1
so has part: feature:625624-625660:1:exon
so has part: feature:627680-627749:1:exon
so has part: feature:628147-628227:1:exon
so has part: feature:628310-628407:1:exon
so has part: feature:628793-628853:1:exon
so has part: feature:629190-629285:1:exon
so has part: feature:629406-629595:1:exon
so has part: feature:629726-629869:1:exon
so has part: feature:630220-630363:1:exon
so has part: feature:630563-630649:1:exon

XP_027299900.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:625624-625660:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:627680-627749:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:628147-628227:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:628310-628407:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:628793-628853:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:629190-629285:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:629406-629595:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:629726-629869:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:630220-630363:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:630563-630649:1:exon

KIRREL3
type: Gene
subclass of: SO_0000704
RO_0002162: 8839
gene: KIRREL3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(632611..945067)
location: region:632611-945067:-1
so has part: feature:632611-945067:-1:exon
subclass of: SO_0000010

101799183
type: Gene
SIO_000068: ncbigene

position:632611:-1
position: 632611
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:945067:-1
position: 945067
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:632611-945067:-1:exon

KIRREL3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8839
gene: KIRREL3
product: kirre like nephrin family adhesion molecule 3, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 17 samples with support for all annotated introns
transcript id: XM_027444097.2
SIO_010081: KIRREL3
subclass of: SO_0000673
so part of: KIRREL3
location: complement(join(632611..633193,633626..633712,640223..640332,643098..643205,646318..646353,647215..647413,647522..647622,652354..652480,654643..654770,655172..655320,671639..671744,676236..676386,679808..679965,710985..711134,713175..713324,944853..945067))
location: region:632611-945067:-1
so has part: feature:944853-945067:-1:exon
so has part: feature:713175-713324:-1:exon
so has part: feature:710985-711134:-1:exon
so has part: feature:679808-679965:-1:exon
so has part: feature:676236-676386:-1:exon
so has part: feature:671639-671744:-1:exon
so has part: feature:655172-655320:-1:exon
so has part: feature:654643-654770:-1:exon
so has part: feature:652354-652480:-1:exon
so has part: feature:647522-647622:-1:exon
so has part: feature:647215-647413:-1:exon
so has part: feature:646318-646353:-1:exon
so has part: feature:643098-643205:-1:exon
so has part: feature:640223-640332:-1:exon
so has part: feature:633626-633712:-1:exon
so has part: feature:632611-633193:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:944853-945067:-1:exon

position:944853:-1
position: 944853
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:713175-713324:-1:exon

position:713175:-1
position: 713175
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:713324:-1
position: 713324
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:710985-711134:-1:exon

position:710985:-1
position: 710985
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:711134:-1
position: 711134
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:679808-679965:-1:exon

position:679808:-1
position: 679808
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:679965:-1
position: 679965
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:676236-676386:-1:exon

position:676236:-1
position: 676236
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:676386:-1
position: 676386
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:671639-671744:-1:exon

position:671639:-1
position: 671639
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:671744:-1
position: 671744
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:655172-655320:-1:exon

position:655172:-1
position: 655172
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:655320:-1
position: 655320
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:654643-654770:-1:exon

position:654643:-1
position: 654643
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:654770:-1
position: 654770
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:652354-652480:-1:exon

position:652354:-1
position: 652354
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:652480:-1
position: 652480
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:647522-647622:-1:exon

position:647522:-1
position: 647522
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:647622:-1
position: 647622
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:647215-647413:-1:exon

position:647215:-1
position: 647215
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:647413:-1
position: 647413
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:646318-646353:-1:exon

position:646318:-1
position: 646318
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:646353:-1
position: 646353
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:643098-643205:-1:exon

position:643098:-1
position: 643098
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:643205:-1
position: 643205
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:640223-640332:-1:exon

position:640223:-1
position: 640223
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:640332:-1
position: 640332
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:633626-633712:-1:exon

position:633626:-1
position: 633626
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:633712:-1
position: 633712
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:632611-633193:-1:exon

position:633193:-1
position: 633193
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

KIRREL3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8839
gene: KIRREL3
product: kirre like nephrin family adhesion molecule 3, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 28 samples with support for all annotated introns
transcript id: XM_027444096.2
SIO_010081: KIRREL3
subclass of: SO_0000673
so part of: KIRREL3
location: complement(join(632611..633193,633626..633712,640223..640332,643098..643205,647215..647413,647522..647622,652354..652480,654643..654770,655172..655320,671639..671744,676236..676386,679808..679965,710985..711134,713175..713324,736641..736718,944853..945067))
location: region:632611-945067:-1
so has part: feature:944853-945067:-1:exon
so has part: feature:736641-736718:-1:exon
so has part: feature:713175-713324:-1:exon
so has part: feature:710985-711134:-1:exon
so has part: feature:679808-679965:-1:exon
so has part: feature:676236-676386:-1:exon
so has part: feature:671639-671744:-1:exon
so has part: feature:655172-655320:-1:exon
so has part: feature:654643-654770:-1:exon
so has part: feature:652354-652480:-1:exon
so has part: feature:647522-647622:-1:exon
so has part: feature:647215-647413:-1:exon
so has part: feature:643098-643205:-1:exon
so has part: feature:640223-640332:-1:exon
so has part: feature:633626-633712:-1:exon
so has part: feature:632611-633193:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:944853-945067:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:736641-736718:-1:exon

position:736641:-1
position: 736641
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:736718:-1
position: 736718
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:713175-713324:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:710985-711134:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:679808-679965:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:676236-676386:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:671639-671744:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:655172-655320:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:654643-654770:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:652354-652480:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:647522-647622:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:647215-647413:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:643098-643205:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:640223-640332:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:633626-633712:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:632611-633193:-1:exon

KIRREL3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8839
gene: KIRREL3
product: kirre like nephrin family adhesion molecule 3, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 8 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 30 samples with support for all annotated introns
transcript id: XM_027444095.2
SIO_010081: KIRREL3
subclass of: SO_0000673
so part of: KIRREL3
location: complement(join(632611..633193,633626..633712,640223..640332,643098..643205,646318..646353,647215..647413,647522..647622,652354..652480,654643..654770,655172..655320,671639..671744,676236..676386,679808..679965,710985..711134,713175..713324,736641..736718,944853..945067))
location: region:632611-945067:-1
so has part: feature:944853-945067:-1:exon
so has part: feature:736641-736718:-1:exon
so has part: feature:713175-713324:-1:exon
so has part: feature:710985-711134:-1:exon
so has part: feature:679808-679965:-1:exon
so has part: feature:676236-676386:-1:exon
so has part: feature:671639-671744:-1:exon
so has part: feature:655172-655320:-1:exon
so has part: feature:654643-654770:-1:exon
so has part: feature:652354-652480:-1:exon
so has part: feature:647522-647622:-1:exon
so has part: feature:647215-647413:-1:exon
so has part: feature:646318-646353:-1:exon
so has part: feature:643098-643205:-1:exon
so has part: feature:640223-640332:-1:exon
so has part: feature:633626-633712:-1:exon
so has part: feature:632611-633193:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:944853-945067:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:736641-736718:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:713175-713324:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:710985-711134:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:679808-679965:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:676236-676386:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:671639-671744:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:655172-655320:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:654643-654770:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:652354-652480:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:647522-647622:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:647215-647413:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:646318-646353:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:643098-643205:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:640223-640332:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:633626-633712:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:632611-633193:-1:exon

KIRREL3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8839
gene: KIRREL3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: kin of IRRE-like protein 3 isoform X3
translation: MSAFQADLLLLLLACFLLSHGQASSFTQQPQDQVVIAGQPVTLLCAIPEYNGIVLWIKDGLALGVGRDLSSYPRYLVVGDHLSGEHHLKILRADLQDDAVYECQAIQAAIRSRPARLTVLVPPDDPIIMGGPIISLRAGDPLNLTCHADNAKPAASIIWMRKGEVINGATYSKTLLRDGKRESIMSTLFIAPSDIENGESIVCRATNKAIPSGKETSVTIDIQHPPLVNLSVEPQPVLEDNTVKFHCSAKANPAVTQYRWAKKGQVIKEASGDFYETIVDHTFFFEPVSCEVTNALGSTNISRTVDVYFGPRMATEPQSLLVDLGSDAVFNCAWTGNPSLTIVWMKRGSGVVLSNENKLTLKSVRQEDAGKYVCRAVVPRVGAGEREVTLTVNGPPIISSTQTQHALHGQKGQIKCFIRSTPPPDRIAWSWKENVLESGTSGRYTVETVSTDEGVISTLTISNIVRADFQTIYNCTAWNSFGSDTEIIRLKEQGTEMKSGAGIQAESVPMAVIIGVAVGAGVAFLVLMATIVAFCCARSQRNLKGVVSAKNDIRVEIVHKEPASGRETEEHPTIKQLMMDRGEFQQDSVLKQLEVLKEEEKEFQNLKDPTNGYYSVNTFKEHHSTPTISLSGCPADLRPAGKQRVPTGMSFTNIYSTLSGQSRLYDYSQRFVLGMGSSSIELCEREFQRGSMSDSSSFLDTQCDSSISSSGKQDGYVQFDKASKASASSSHHSQSSSQNSDPSRPLQRRMQTHV
SIO_010081: KIRREL3
subclass of: SO_0000673
so part of: KIRREL3
location: complement(join(632750..633193,633626..633712,640223..640332,643098..643205,646318..646353,647215..647413,647522..647622,652354..652480,654643..654770,655172..655320,671639..671744,676236..676386,679808..679965,710985..711134,713175..713324,944853..944913))
location: region:632750-944913:-1
so has part: feature:944853-944913:-1:exon
so has part: feature:713175-713324:-1:exon
so has part: feature:710985-711134:-1:exon
so has part: feature:679808-679965:-1:exon
so has part: feature:676236-676386:-1:exon
so has part: feature:671639-671744:-1:exon
so has part: feature:655172-655320:-1:exon
so has part: feature:654643-654770:-1:exon
so has part: feature:652354-652480:-1:exon
so has part: feature:647522-647622:-1:exon
so has part: feature:647215-647413:-1:exon
so has part: feature:646318-646353:-1:exon
so has part: feature:643098-643205:-1:exon
so has part: feature:640223-640332:-1:exon
so has part: feature:633626-633712:-1:exon
so has part: feature:632750-633193:-1:exon

XP_027299898.1
type: Protein
SIO_000068: ncbiprotein

position:632750:-1
position: 632750
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:944913:-1
position: 944913
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:944853-944913:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:713175-713324:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:710985-711134:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:679808-679965:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:676236-676386:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:671639-671744:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:655172-655320:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:654643-654770:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:652354-652480:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:647522-647622:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:647215-647413:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:646318-646353:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:643098-643205:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:640223-640332:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:633626-633712:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:632750-633193:-1:exon

KIRREL3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8839
gene: KIRREL3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: kin of IRRE-like protein 3 isoform X2
translation: MSAFQADLLLLLLACFLLSHELGLPGRGCCLVLGFMYKEKYRRMTEGQASSFTQQPQDQVVIAGQPVTLLCAIPEYNGIVLWIKDGLALGVGRDLSSYPRYLVVGDHLSGEHHLKILRADLQDDAVYECQAIQAAIRSRPARLTVLVPPDDPIIMGGPIISLRAGDPLNLTCHADNAKPAASIIWMRKGEVINGATYSKTLLRDGKRESIMSTLFIAPSDIENGESIVCRATNKAIPSGKETSVTIDIQHPPLVNLSVEPQPVLEDNTVKFHCSAKANPAVTQYRWAKKGQVIKEASGDFYETIVDHTFFFEPVSCEVTNALGSTNISRTVDVYFGPRMATEPQSLLVDLGSDAVFNCAWTGNPSLTIVWMKRGSGVVLSNENKLTLKSVRQEDAGKYVCRAVVPRVGAGEREVTLTVNGPPIISSTQTQHALHGQKGQIKCFIRSTPPPDRIAWSWKENVLESGTSGRYTVETVSTDEGVISTLTISNIVRADFQTIYNCTAWNSFGSDTEIIRLKEQESVPMAVIIGVAVGAGVAFLVLMATIVAFCCARSQRNLKGVVSAKNDIRVEIVHKEPASGRETEEHPTIKQLMMDRGEFQQDSVLKQLEVLKEEEKEFQNLKDPTNGYYSVNTFKEHHSTPTISLSGCPADLRPAGKQRVPTGMSFTNIYSTLSGQSRLYDYSQRFVLGMGSSSIELCEREFQRGSMSDSSSFLDTQCDSSISSSGKQDGYVQFDKASKASASSSHHSQSSSQNSDPSRPLQRRMQTHV
SIO_010081: KIRREL3
subclass of: SO_0000673
so part of: KIRREL3
location: complement(join(632750..633193,633626..633712,640223..640332,643098..643205,647215..647413,647522..647622,652354..652480,654643..654770,655172..655320,671639..671744,676236..676386,679808..679965,710985..711134,713175..713324,736641..736718,944853..944913))
location: region:632750-944913:-1
so has part: feature:944853-944913:-1:exon
so has part: feature:736641-736718:-1:exon
so has part: feature:713175-713324:-1:exon
so has part: feature:710985-711134:-1:exon
so has part: feature:679808-679965:-1:exon
so has part: feature:676236-676386:-1:exon
so has part: feature:671639-671744:-1:exon
so has part: feature:655172-655320:-1:exon
so has part: feature:654643-654770:-1:exon
so has part: feature:652354-652480:-1:exon
so has part: feature:647522-647622:-1:exon
so has part: feature:647215-647413:-1:exon
so has part: feature:643098-643205:-1:exon
so has part: feature:640223-640332:-1:exon
so has part: feature:633626-633712:-1:exon
so has part: feature:632750-633193:-1:exon

XP_027299897.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:944853-944913:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:736641-736718:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:713175-713324:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:710985-711134:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:679808-679965:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:676236-676386:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:671639-671744:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:655172-655320:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:654643-654770:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:652354-652480:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:647522-647622:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:647215-647413:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:643098-643205:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:640223-640332:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:633626-633712:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:632750-633193:-1:exon

KIRREL3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8839
gene: KIRREL3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: kin of IRRE-like protein 3 isoform X1
translation: MSAFQADLLLLLLACFLLSHELGLPGRGCCLVLGFMYKEKYRRMTEGQASSFTQQPQDQVVIAGQPVTLLCAIPEYNGIVLWIKDGLALGVGRDLSSYPRYLVVGDHLSGEHHLKILRADLQDDAVYECQAIQAAIRSRPARLTVLVPPDDPIIMGGPIISLRAGDPLNLTCHADNAKPAASIIWMRKGEVINGATYSKTLLRDGKRESIMSTLFIAPSDIENGESIVCRATNKAIPSGKETSVTIDIQHPPLVNLSVEPQPVLEDNTVKFHCSAKANPAVTQYRWAKKGQVIKEASGDFYETIVDHTFFFEPVSCEVTNALGSTNISRTVDVYFGPRMATEPQSLLVDLGSDAVFNCAWTGNPSLTIVWMKRGSGVVLSNENKLTLKSVRQEDAGKYVCRAVVPRVGAGEREVTLTVNGPPIISSTQTQHALHGQKGQIKCFIRSTPPPDRIAWSWKENVLESGTSGRYTVETVSTDEGVISTLTISNIVRADFQTIYNCTAWNSFGSDTEIIRLKEQGTEMKSGAGIQAESVPMAVIIGVAVGAGVAFLVLMATIVAFCCARSQRNLKGVVSAKNDIRVEIVHKEPASGRETEEHPTIKQLMMDRGEFQQDSVLKQLEVLKEEEKEFQNLKDPTNGYYSVNTFKEHHSTPTISLSGCPADLRPAGKQRVPTGMSFTNIYSTLSGQSRLYDYSQRFVLGMGSSSIELCEREFQRGSMSDSSSFLDTQCDSSISSSGKQDGYVQFDKASKASASSSHHSQSSSQNSDPSRPLQRRMQTHV
SIO_010081: KIRREL3
subclass of: SO_0000673
so part of: KIRREL3
location: complement(join(632750..633193,633626..633712,640223..640332,643098..643205,646318..646353,647215..647413,647522..647622,652354..652480,654643..654770,655172..655320,671639..671744,676236..676386,679808..679965,710985..711134,713175..713324,736641..736718,944853..944913))
location: region:632750-944913:-1
so has part: feature:944853-944913:-1:exon
so has part: feature:736641-736718:-1:exon
so has part: feature:713175-713324:-1:exon
so has part: feature:710985-711134:-1:exon
so has part: feature:679808-679965:-1:exon
so has part: feature:676236-676386:-1:exon
so has part: feature:671639-671744:-1:exon
so has part: feature:655172-655320:-1:exon
so has part: feature:654643-654770:-1:exon
so has part: feature:652354-652480:-1:exon
so has part: feature:647522-647622:-1:exon
so has part: feature:647215-647413:-1:exon
so has part: feature:646318-646353:-1:exon
so has part: feature:643098-643205:-1:exon
so has part: feature:640223-640332:-1:exon
so has part: feature:633626-633712:-1:exon
so has part: feature:632750-633193:-1:exon

XP_027299896.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:944853-944913:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:736641-736718:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:713175-713324:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:710985-711134:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:679808-679965:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:676236-676386:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:671639-671744:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:655172-655320:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:654643-654770:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:652354-652480:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:647522-647622:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:647215-647413:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:646318-646353:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:643098-643205:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:640223-640332:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:633626-633712:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:632750-633193:-1:exon

LOC106017130
type: Gene
subclass of: SO_0000704
RO_0002162: 8839
gene: LOC106017130
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 662741..666947
location: region:662741-666947:1
so has part: feature:662741-666947:1:exon
subclass of: SO_0000011

106017130
type: Gene
SIO_000068: ncbigene

position:662741:1
position: 662741
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:666947:1
position: 666947
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:662741-666947:1:exon

LOC106017130
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 8839
nc RNA class: lncRNA
gene: LOC106017130
product: uncharacterized LOC106017130
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 10 samples with support for all annotated introns
transcript id: XR_001190376.4
SIO_010081: LOC106017130
subclass of: SO_0000673
so part of: LOC106017130
location: join(662741..663087,663213..663480,663581..666947)
location: region:662741-666947:1
so has part: feature:662741-663087:1:exon
so has part: feature:663213-663480:1:exon
so has part: feature:663581-666947:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:662741-663087:1:exon

position:663087:1
position: 663087
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:663213-663480:1:exon

position:663213:1
position: 663213
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:663480:1
position: 663480
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:663581-666947:1:exon

position:663581:1
position: 663581
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC119713699
type: Gene
subclass of: SO_0000704
RO_0002162: 8839
gene: LOC119713699
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 699201..701883
location: region:699201-701883:1
so has part: feature:699201-701883:1:exon
subclass of: SO_0000011

119713699
type: Gene
SIO_000068: ncbigene

position:699201:1
position: 699201
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:701883:1
position: 701883
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:699201-701883:1:exon

LOC119713699
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 8839
nc RNA class: lncRNA
gene: LOC119713699
product: uncharacterized LOC119713699
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 10 samples with support for all annotated introns
transcript id: XR_005260908.1
SIO_010081: LOC119713699
subclass of: SO_0000673
so part of: LOC119713699
location: join(699201..701528,701623..701883)
location: region:699201-701883:1
so has part: feature:699201-701528:1:exon
so has part: feature:701623-701883:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:699201-701528:1:exon

position:701528:1
position: 701528
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:701623-701883:1:exon

position:701623:1
position: 701623
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC106017131
type: Gene
subclass of: SO_0000704
RO_0002162: 8839
gene: LOC106017131
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1115143..1117030)
location: region:1115143-1117030:-1
so has part: feature:1115143-1117030:-1:exon
subclass of: SO_0000011

106017131
type: Gene
SIO_000068: ncbigene

position:1115143:-1
position: 1115143
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1117030:-1
position: 1117030
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1115143-1117030:-1:exon

LOC106017131
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 8839
nc RNA class: lncRNA
gene: LOC106017131
product: uncharacterized LOC106017131
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 9 samples with support for all annotated introns
transcript id: XR_001190377.4
SIO_010081: LOC106017131
subclass of: SO_0000673
so part of: LOC106017131
location: complement(join(1115143..1115491,1115680..1115779,1116902..1117030))
location: region:1115143-1117030:-1
so has part: feature:1116902-1117030:-1:exon
so has part: feature:1115680-1115779:-1:exon
so has part: feature:1115143-1115491:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1116902-1117030:-1:exon

position:1116902:-1
position: 1116902
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1115680-1115779:-1:exon

position:1115680:-1
position: 1115680
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1115779:-1
position: 1115779
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1115143-1115491:-1:exon

position:1115491:-1
position: 1115491
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC101793096
type: Gene
subclass of: SO_0000704
RO_0002162: 8839
gene: LOC101793096
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1123881..1126463
location: region:1123881-1126463:1
so has part: feature:1123881-1126463:1:exon
subclass of: SO_0000011

101793096
type: Gene
SIO_000068: ncbigene

position:1123881:1
position: 1123881
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1126463:1
position: 1126463
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1123881-1126463:1:exon

LOC101793096
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 8839
nc RNA class: lncRNA
gene: LOC101793096
product: uncharacterized LOC101793096
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 17 samples with support for all annotated introns
transcript id: XR_217272.5
SIO_010081: LOC101793096
subclass of: SO_0000673
so part of: LOC101793096
location: join(1123881..1124002,1125255..1125553,1125670..1126463)
location: region:1123881-1126463:1
so has part: feature:1123881-1124002:1:exon
so has part: feature:1125255-1125553:1:exon
so has part: feature:1125670-1126463:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1123881-1124002:1:exon

position:1124002:1
position: 1124002
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1125255-1125553:1:exon

position:1125255:1
position: 1125255
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1125553:1
position: 1125553
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1125670-1126463:1:exon

position:1125670:1
position: 1125670
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

ETS1
type: Gene
subclass of: SO_0000704
RO_0002162: 8839
gene: ETS1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1174281..1251643)
location: region:1174281-1251643:-1
so has part: feature:1174281-1251643:-1:exon
subclass of: SO_0000010

101793215
type: Gene
SIO_000068: ncbigene

position:1174281:-1
position: 1174281
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1251643:-1
position: 1251643
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1174281-1251643:-1:exon

ETS1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8839
gene: ETS1
product: ETS proto-oncogene 1, transcription factor, transcript variant X6
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 8 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 53 samples with support for all annotated introns
transcript id: XM_027444126.2
SIO_010081: ETS1
subclass of: SO_0000673
so part of: ETS1
location: complement(join(1174281..1179064,1179505..1179623,1189561..1189821,1193360..1193605,1194547..1194624,1198105..1198305,1198957..1199076,1242373..1242514,1244778..1244860,1251496..1251643))
location: region:1174281-1251643:-1
so has part: feature:1251496-1251643:-1:exon
so has part: feature:1244778-1244860:-1:exon
so has part: feature:1242373-1242514:-1:exon
so has part: feature:1198957-1199076:-1:exon
so has part: feature:1198105-1198305:-1:exon
so has part: feature:1194547-1194624:-1:exon
so has part: feature:1193360-1193605:-1:exon
so has part: feature:1189561-1189821:-1:exon
so has part: feature:1179505-1179623:-1:exon
so has part: feature:1174281-1179064:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1251496-1251643:-1:exon

position:1251496:-1
position: 1251496
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1244778-1244860:-1:exon

position:1244778:-1
position: 1244778
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1244860:-1
position: 1244860
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1242373-1242514:-1:exon

position:1242373:-1
position: 1242373
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1242514:-1
position: 1242514
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1198957-1199076:-1:exon

position:1198957:-1
position: 1198957
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1199076:-1
position: 1199076
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1198105-1198305:-1:exon

position:1198105:-1
position: 1198105
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1198305:-1
position: 1198305
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1194547-1194624:-1:exon

position:1194547:-1
position: 1194547
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1194624:-1
position: 1194624
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1193360-1193605:-1:exon

position:1193360:-1
position: 1193360
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1193605:-1
position: 1193605
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1189561-1189821:-1:exon

position:1189561:-1
position: 1189561
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1189821:-1
position: 1189821
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:1179505-1179623:-1:exon

position:1179505:-1
position: 1179505
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1179623:-1
position: 1179623
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:1174281-1179064:-1:exon

position:1179064:-1
position: 1179064
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

ETS1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8839
gene: ETS1
product: ETS proto-oncogene 1, transcription factor, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 7 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 113 samples with support for all annotated introns
transcript id: XM_005019650.5
SIO_010081: ETS1
subclass of: SO_0000673
so part of: ETS1
location: complement(join(1174281..1179064,1179505..1179623,1189561..1189821,1193360..1193605,1194547..1194624,1198105..1198305,1198957..1199076,1242373..1242517,1244778..1244860,1251496..1251643))
location: region:1174281-1251643:-1
so has part: feature:1251496-1251643:-1:exon
so has part: feature:1244778-1244860:-1:exon
so has part: feature:1242373-1242517:-1:exon
so has part: feature:1198957-1199076:-1:exon
so has part: feature:1198105-1198305:-1:exon
so has part: feature:1194547-1194624:-1:exon
so has part: feature:1193360-1193605:-1:exon
so has part: feature:1189561-1189821:-1:exon
so has part: feature:1179505-1179623:-1:exon
so has part: feature:1174281-1179064:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1251496-1251643:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1244778-1244860:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1242373-1242517:-1:exon

position:1242517:-1
position: 1242517
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1198957-1199076:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1198105-1198305:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1194547-1194624:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1193360-1193605:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1189561-1189821:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1179505-1179623:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1174281-1179064:-1:exon

ETS1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8839
gene: ETS1
product: ETS proto-oncogene 1, transcription factor, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 7 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 14 samples with support for all annotated introns
transcript id: XM_027444125.2
SIO_010081: ETS1
subclass of: SO_0000673
so part of: ETS1
location: complement(join(1174281..1179064,1179505..1179623,1189561..1189821,1193360..1193605,1194547..1194624,1198105..1198305,1198957..1199076,1242373..1242517,1244778..1244860,1247100..1247174))
location: region:1174281-1247174:-1
so has part: feature:1247100-1247174:-1:exon
so has part: feature:1244778-1244860:-1:exon
so has part: feature:1242373-1242517:-1:exon
so has part: feature:1198957-1199076:-1:exon
so has part: feature:1198105-1198305:-1:exon
so has part: feature:1194547-1194624:-1:exon
so has part: feature:1193360-1193605:-1:exon
so has part: feature:1189561-1189821:-1:exon
so has part: feature:1179505-1179623:-1:exon
so has part: feature:1174281-1179064:-1:exon

position:1247174:-1
position: 1247174
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1247100-1247174:-1:exon

position:1247100:-1
position: 1247100
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1244778-1244860:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1242373-1242517:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1198957-1199076:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1198105-1198305:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1194547-1194624:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1193360-1193605:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1189561-1189821:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1179505-1179623:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1174281-1179064:-1:exon

ETS1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8839
gene: ETS1
product: ETS proto-oncogene 1, transcription factor, transcript variant X7
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 7 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 12 samples with support for all annotated introns
transcript id: XM_038167551.1
SIO_010081: ETS1
subclass of: SO_0000673
so part of: ETS1
location: complement(join(1174281..1179064,1179505..1179623,1189561..1189821,1193360..1193605,1194547..1194624,1198105..1198305,1198957..1199076,1242373..1242514,1244778..1244860,1247100..1247171))
location: region:1174281-1247171:-1
so has part: feature:1247100-1247171:-1:exon
so has part: feature:1244778-1244860:-1:exon
so has part: feature:1242373-1242514:-1:exon
so has part: feature:1198957-1199076:-1:exon
so has part: feature:1198105-1198305:-1:exon
so has part: feature:1194547-1194624:-1:exon
so has part: feature:1193360-1193605:-1:exon
so has part: feature:1189561-1189821:-1:exon
so has part: feature:1179505-1179623:-1:exon
so has part: feature:1174281-1179064:-1:exon

position:1247171:-1
position: 1247171
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1247100-1247171:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1244778-1244860:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1242373-1242514:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1198957-1199076:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1198105-1198305:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1194547-1194624:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1193360-1193605:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1189561-1189821:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1179505-1179623:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1174281-1179064:-1:exon

ETS1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8839
gene: ETS1
product: ETS proto-oncogene 1, transcription factor, transcript variant X5
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 7 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 15 samples with support for all annotated introns
transcript id: XM_038167549.1
SIO_010081: ETS1
subclass of: SO_0000673
so part of: ETS1
location: complement(join(1174281..1179064,1179505..1179623,1189561..1189821,1193360..1193605,1194547..1194624,1198105..1198305,1198957..1199076,1242373..1242517,1244778..1244860,1245345..1245363))
location: region:1174281-1245363:-1
so has part: feature:1245345-1245363:-1:exon
so has part: feature:1244778-1244860:-1:exon
so has part: feature:1242373-1242517:-1:exon
so has part: feature:1198957-1199076:-1:exon
so has part: feature:1198105-1198305:-1:exon
so has part: feature:1194547-1194624:-1:exon
so has part: feature:1193360-1193605:-1:exon
so has part: feature:1189561-1189821:-1:exon
so has part: feature:1179505-1179623:-1:exon
so has part: feature:1174281-1179064:-1:exon

position:1245363:-1
position: 1245363
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1245345-1245363:-1:exon

position:1245345:-1
position: 1245345
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1244778-1244860:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1242373-1242517:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1198957-1199076:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1198105-1198305:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1194547-1194624:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1193360-1193605:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1189561-1189821:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1179505-1179623:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1174281-1179064:-1:exon

ETS1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8839
gene: ETS1
product: ETS proto-oncogene 1, transcription factor, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 7 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 12 samples with support for all annotated introns
transcript id: XM_038167548.1
SIO_010081: ETS1
subclass of: SO_0000673
so part of: ETS1
location: complement(join(1174281..1179064,1179505..1179623,1189561..1189821,1193360..1193605,1194547..1194624,1198105..1198305,1198957..1199076,1242373..1242517,1244778..1244860,1245143..1245160))
location: region:1174281-1245160:-1
so has part: feature:1245143-1245160:-1:exon
so has part: feature:1244778-1244860:-1:exon
so has part: feature:1242373-1242517:-1:exon
so has part: feature:1198957-1199076:-1:exon
so has part: feature:1198105-1198305:-1:exon
so has part: feature:1194547-1194624:-1:exon
so has part: feature:1193360-1193605:-1:exon
so has part: feature:1189561-1189821:-1:exon
so has part: feature:1179505-1179623:-1:exon
so has part: feature:1174281-1179064:-1:exon

position:1245160:-1
position: 1245160
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1245143-1245160:-1:exon

position:1245143:-1
position: 1245143
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1244778-1244860:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1242373-1242517:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1198957-1199076:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1198105-1198305:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1194547-1194624:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1193360-1193605:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1189561-1189821:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1179505-1179623:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1174281-1179064:-1:exon

ETS1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8839
gene: ETS1
product: ETS proto-oncogene 1, transcription factor, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 16 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 125 samples with support for all annotated introns
transcript id: XM_027444124.2
SIO_010081: ETS1
subclass of: SO_0000673
so part of: ETS1
location: complement(join(1174281..1179064,1179505..1179623,1189561..1189821,1193360..1193605,1194547..1194624,1198105..1198305,1198957..1199076,1222408..1222694))
location: region:1174281-1222694:-1
so has part: feature:1222408-1222694:-1:exon
so has part: feature:1198957-1199076:-1:exon
so has part: feature:1198105-1198305:-1:exon
so has part: feature:1194547-1194624:-1:exon
so has part: feature:1193360-1193605:-1:exon
so has part: feature:1189561-1189821:-1:exon
so has part: feature:1179505-1179623:-1:exon
so has part: feature:1174281-1179064:-1:exon

position:1222694:-1
position: 1222694
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1222408-1222694:-1:exon

position:1222408:-1
position: 1222408
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1198957-1199076:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1198105-1198305:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1194547-1194624:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1193360-1193605:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1189561-1189821:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1179505-1179623:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1174281-1179064:-1:exon

ETS1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8839
gene: ETS1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protein C-ets-1 isoform X3
translation: MMSYYMDTAIGSAGPYPLARPGVMQGAVGSCEDPWMTCGFQSACYQPRACYPLWDESAIQEVPTGLEHYSTDMECADVPLLTPSSKEMMSQALKATFSGFAKEQQRLGIPKDPQQWTETHVRDWVMWAVNEFSLKGVDFQKFCMNGAALCALGKECFLELAPDFVGDILWEHLEILQKEEIKPYPANGVNAAYPESRYTSDYFISYGIEHAQCVPPSEFSEPSFITESYQTLHPISSEELLSLKYENDYSVILRDPVQTDSLQTDYFTIKQEVVTPDNMCMGRASRGKLGGQDSFESIESYDSCDRLTQSWSSQSSFQSLQRVPSYDSFDSEDYPAALPNHKPKGTFKDYVRDRADMNKDKPVIPAAALAGYTGSGPIQLWQFLLELLTDKSCQSFISWTGDGWEFKLSDPDEVARRWGKRKNKPKMNYEKLSRGLRYYYDKNIIHKTAGKRYVYRFVCDLQSLLGYTPEELHAMLDVKPDADE
SIO_010081: ETS1
subclass of: SO_0000673
so part of: ETS1
location: complement(join(1178849..1179064,1179505..1179623,1189561..1189821,1193360..1193605,1194547..1194624,1198105..1198305,1198957..1199076,1242373..1242514,1244778..1244849))
location: region:1178849-1244849:-1
so has part: feature:1244778-1244849:-1:exon
so has part: feature:1242373-1242514:-1:exon
so has part: feature:1198957-1199076:-1:exon
so has part: feature:1198105-1198305:-1:exon
so has part: feature:1194547-1194624:-1:exon
so has part: feature:1193360-1193605:-1:exon
so has part: feature:1189561-1189821:-1:exon
so has part: feature:1179505-1179623:-1:exon
so has part: feature:1178849-1179064:-1:exon

XP_027299927.1
type: Protein
SIO_000068: ncbiprotein

position:1178849:-1
position: 1178849
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1244849:-1
position: 1244849
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1244778-1244849:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1242373-1242514:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1198957-1199076:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1198105-1198305:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1194547-1194624:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1193360-1193605:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1189561-1189821:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1179505-1179623:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1178849-1179064:-1:exon

ETS1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8839
gene: ETS1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protein C-ets-1 isoform X3
translation: MMSYYMDTAIGSAGPYPLARPGVMQGAVGSCEDPWMTCGFQSACYQPRACYPLWDESAIQEVPTGLEHYSTDMECADVPLLTPSSKEMMSQALKATFSGFAKEQQRLGIPKDPQQWTETHVRDWVMWAVNEFSLKGVDFQKFCMNGAALCALGKECFLELAPDFVGDILWEHLEILQKEEIKPYPANGVNAAYPESRYTSDYFISYGIEHAQCVPPSEFSEPSFITESYQTLHPISSEELLSLKYENDYSVILRDPVQTDSLQTDYFTIKQEVVTPDNMCMGRASRGKLGGQDSFESIESYDSCDRLTQSWSSQSSFQSLQRVPSYDSFDSEDYPAALPNHKPKGTFKDYVRDRADMNKDKPVIPAAALAGYTGSGPIQLWQFLLELLTDKSCQSFISWTGDGWEFKLSDPDEVARRWGKRKNKPKMNYEKLSRGLRYYYDKNIIHKTAGKRYVYRFVCDLQSLLGYTPEELHAMLDVKPDADE
SIO_010081: ETS1
subclass of: SO_0000673
so part of: ETS1
location: complement(join(1178849..1179064,1179505..1179623,1189561..1189821,1193360..1193605,1194547..1194624,1198105..1198305,1198957..1199076,1242373..1242514,1244778..1244849))
location: region:1178849-1244849:-1
so has part: feature:1244778-1244849:-1:exon
so has part: feature:1242373-1242514:-1:exon
so has part: feature:1198957-1199076:-1:exon
so has part: feature:1198105-1198305:-1:exon
so has part: feature:1194547-1194624:-1:exon
so has part: feature:1193360-1193605:-1:exon
so has part: feature:1189561-1189821:-1:exon
so has part: feature:1179505-1179623:-1:exon
so has part: feature:1178849-1179064:-1:exon

XP_038023479.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1244778-1244849:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1242373-1242514:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1198957-1199076:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1198105-1198305:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1194547-1194624:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1193360-1193605:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1189561-1189821:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1179505-1179623:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1178849-1179064:-1:exon

ETS1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8839
gene: ETS1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protein C-ets-1 isoform X2
translation: MMSYYMDTAIGSAGPYPLARPGVMKQGAVGSCEDPWMTCGFQSACYQPRACYPLWDESAIQEVPTGLEHYSTDMECADVPLLTPSSKEMMSQALKATFSGFAKEQQRLGIPKDPQQWTETHVRDWVMWAVNEFSLKGVDFQKFCMNGAALCALGKECFLELAPDFVGDILWEHLEILQKEEIKPYPANGVNAAYPESRYTSDYFISYGIEHAQCVPPSEFSEPSFITESYQTLHPISSEELLSLKYENDYSVILRDPVQTDSLQTDYFTIKQEVVTPDNMCMGRASRGKLGGQDSFESIESYDSCDRLTQSWSSQSSFQSLQRVPSYDSFDSEDYPAALPNHKPKGTFKDYVRDRADMNKDKPVIPAAALAGYTGSGPIQLWQFLLELLTDKSCQSFISWTGDGWEFKLSDPDEVARRWGKRKNKPKMNYEKLSRGLRYYYDKNIIHKTAGKRYVYRFVCDLQSLLGYTPEELHAMLDVKPDADE
SIO_010081: ETS1
subclass of: SO_0000673
so part of: ETS1
location: complement(join(1178849..1179064,1179505..1179623,1189561..1189821,1193360..1193605,1194547..1194624,1198105..1198305,1198957..1199076,1242373..1242517,1244778..1244849))
location: region:1178849-1244849:-1
so has part: feature:1244778-1244849:-1:exon
so has part: feature:1242373-1242517:-1:exon
so has part: feature:1198957-1199076:-1:exon
so has part: feature:1198105-1198305:-1:exon
so has part: feature:1194547-1194624:-1:exon
so has part: feature:1193360-1193605:-1:exon
so has part: feature:1189561-1189821:-1:exon
so has part: feature:1179505-1179623:-1:exon
so has part: feature:1178849-1179064:-1:exon

XP_005019707.4
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1244778-1244849:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1242373-1242517:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1198957-1199076:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1198105-1198305:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1194547-1194624:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1193360-1193605:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1189561-1189821:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1179505-1179623:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1178849-1179064:-1:exon

ETS1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8839
gene: ETS1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protein C-ets-1 isoform X2
translation: MMSYYMDTAIGSAGPYPLARPGVMKQGAVGSCEDPWMTCGFQSACYQPRACYPLWDESAIQEVPTGLEHYSTDMECADVPLLTPSSKEMMSQALKATFSGFAKEQQRLGIPKDPQQWTETHVRDWVMWAVNEFSLKGVDFQKFCMNGAALCALGKECFLELAPDFVGDILWEHLEILQKEEIKPYPANGVNAAYPESRYTSDYFISYGIEHAQCVPPSEFSEPSFITESYQTLHPISSEELLSLKYENDYSVILRDPVQTDSLQTDYFTIKQEVVTPDNMCMGRASRGKLGGQDSFESIESYDSCDRLTQSWSSQSSFQSLQRVPSYDSFDSEDYPAALPNHKPKGTFKDYVRDRADMNKDKPVIPAAALAGYTGSGPIQLWQFLLELLTDKSCQSFISWTGDGWEFKLSDPDEVARRWGKRKNKPKMNYEKLSRGLRYYYDKNIIHKTAGKRYVYRFVCDLQSLLGYTPEELHAMLDVKPDADE
SIO_010081: ETS1
subclass of: SO_0000673
so part of: ETS1
location: complement(join(1178849..1179064,1179505..1179623,1189561..1189821,1193360..1193605,1194547..1194624,1198105..1198305,1198957..1199076,1242373..1242517,1244778..1244849))
location: region:1178849-1244849:-1
so has part: feature:1244778-1244849:-1:exon
so has part: feature:1242373-1242517:-1:exon
so has part: feature:1198957-1199076:-1:exon
so has part: feature:1198105-1198305:-1:exon
so has part: feature:1194547-1194624:-1:exon
so has part: feature:1193360-1193605:-1:exon
so has part: feature:1189561-1189821:-1:exon
so has part: feature:1179505-1179623:-1:exon
so has part: feature:1178849-1179064:-1:exon

XP_027299926.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1244778-1244849:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1242373-1242517:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1198957-1199076:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1198105-1198305:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1194547-1194624:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1193360-1193605:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1189561-1189821:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1179505-1179623:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1178849-1179064:-1:exon

ETS1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8839
gene: ETS1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protein C-ets-1 isoform X2
translation: MMSYYMDTAIGSAGPYPLARPGVMKQGAVGSCEDPWMTCGFQSACYQPRACYPLWDESAIQEVPTGLEHYSTDMECADVPLLTPSSKEMMSQALKATFSGFAKEQQRLGIPKDPQQWTETHVRDWVMWAVNEFSLKGVDFQKFCMNGAALCALGKECFLELAPDFVGDILWEHLEILQKEEIKPYPANGVNAAYPESRYTSDYFISYGIEHAQCVPPSEFSEPSFITESYQTLHPISSEELLSLKYENDYSVILRDPVQTDSLQTDYFTIKQEVVTPDNMCMGRASRGKLGGQDSFESIESYDSCDRLTQSWSSQSSFQSLQRVPSYDSFDSEDYPAALPNHKPKGTFKDYVRDRADMNKDKPVIPAAALAGYTGSGPIQLWQFLLELLTDKSCQSFISWTGDGWEFKLSDPDEVARRWGKRKNKPKMNYEKLSRGLRYYYDKNIIHKTAGKRYVYRFVCDLQSLLGYTPEELHAMLDVKPDADE
SIO_010081: ETS1
subclass of: SO_0000673
so part of: ETS1
location: complement(join(1178849..1179064,1179505..1179623,1189561..1189821,1193360..1193605,1194547..1194624,1198105..1198305,1198957..1199076,1242373..1242517,1244778..1244849))
location: region:1178849-1244849:-1
so has part: feature:1244778-1244849:-1:exon
so has part: feature:1242373-1242517:-1:exon
so has part: feature:1198957-1199076:-1:exon
so has part: feature:1198105-1198305:-1:exon
so has part: feature:1194547-1194624:-1:exon
so has part: feature:1193360-1193605:-1:exon
so has part: feature:1189561-1189821:-1:exon
so has part: feature:1179505-1179623:-1:exon
so has part: feature:1178849-1179064:-1:exon

XP_038023476.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1244778-1244849:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1242373-1242517:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1198957-1199076:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1198105-1198305:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1194547-1194624:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1193360-1193605:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1189561-1189821:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1179505-1179623:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1178849-1179064:-1:exon

ETS1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8839
gene: ETS1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protein C-ets-1 isoform X2
translation: MMSYYMDTAIGSAGPYPLARPGVMKQGAVGSCEDPWMTCGFQSACYQPRACYPLWDESAIQEVPTGLEHYSTDMECADVPLLTPSSKEMMSQALKATFSGFAKEQQRLGIPKDPQQWTETHVRDWVMWAVNEFSLKGVDFQKFCMNGAALCALGKECFLELAPDFVGDILWEHLEILQKEEIKPYPANGVNAAYPESRYTSDYFISYGIEHAQCVPPSEFSEPSFITESYQTLHPISSEELLSLKYENDYSVILRDPVQTDSLQTDYFTIKQEVVTPDNMCMGRASRGKLGGQDSFESIESYDSCDRLTQSWSSQSSFQSLQRVPSYDSFDSEDYPAALPNHKPKGTFKDYVRDRADMNKDKPVIPAAALAGYTGSGPIQLWQFLLELLTDKSCQSFISWTGDGWEFKLSDPDEVARRWGKRKNKPKMNYEKLSRGLRYYYDKNIIHKTAGKRYVYRFVCDLQSLLGYTPEELHAMLDVKPDADE
SIO_010081: ETS1
subclass of: SO_0000673
so part of: ETS1
location: complement(join(1178849..1179064,1179505..1179623,1189561..1189821,1193360..1193605,1194547..1194624,1198105..1198305,1198957..1199076,1242373..1242517,1244778..1244849))
location: region:1178849-1244849:-1
so has part: feature:1244778-1244849:-1:exon
so has part: feature:1242373-1242517:-1:exon
so has part: feature:1198957-1199076:-1:exon
so has part: feature:1198105-1198305:-1:exon
so has part: feature:1194547-1194624:-1:exon
so has part: feature:1193360-1193605:-1:exon
so has part: feature:1189561-1189821:-1:exon
so has part: feature:1179505-1179623:-1:exon
so has part: feature:1178849-1179064:-1:exon

XP_038023477.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1244778-1244849:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1242373-1242517:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1198957-1199076:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1198105-1198305:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1194547-1194624:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1193360-1193605:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1189561-1189821:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1179505-1179623:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1178849-1179064:-1:exon

ETS1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8839
gene: ETS1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protein C-ets-1 isoform X1
translation: MKAAVDLKPTLTIIKTEKVDIDLFPSADMECADVPLLTPSSKEMMSQALKATFSGFAKEQQRLGIPKDPQQWTETHVRDWVMWAVNEFSLKGVDFQKFCMNGAALCALGKECFLELAPDFVGDILWEHLEILQKEEIKPYPANGVNAAYPESRYTSDYFISYGIEHAQCVPPSEFSEPSFITESYQTLHPISSEELLSLKYENDYSVILRDPVQTDSLQTDYFTIKQEVVTPDNMCMGRASRGKLGGQDSFESIESYDSCDRLTQSWSSQSSFQSLQRVPSYDSFDSEDYPAALPNHKPKGTFKDYVRDRADMNKDKPVIPAAALAGYTGSGPIQLWQFLLELLTDKSCQSFISWTGDGWEFKLSDPDEVARRWGKRKNKPKMNYEKLSRGLRYYYDKNIIHKTAGKRYVYRFVCDLQSLLGYTPEELHAMLDVKPDADE
SIO_010081: ETS1
subclass of: SO_0000673
so part of: ETS1
location: complement(join(1178849..1179064,1179505..1179623,1189561..1189821,1193360..1193605,1194547..1194624,1198105..1198305,1198957..1199076,1222408..1222489))
location: region:1178849-1222489:-1
so has part: feature:1222408-1222489:-1:exon
so has part: feature:1198957-1199076:-1:exon
so has part: feature:1198105-1198305:-1:exon
so has part: feature:1194547-1194624:-1:exon
so has part: feature:1193360-1193605:-1:exon
so has part: feature:1189561-1189821:-1:exon
so has part: feature:1179505-1179623:-1:exon
so has part: feature:1178849-1179064:-1:exon

XP_027299925.1
type: Protein
SIO_000068: ncbiprotein

position:1222489:-1
position: 1222489
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1222408-1222489:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1198957-1199076:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1198105-1198305:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1194547-1194624:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1193360-1193605:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1189561-1189821:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1179505-1179623:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1178849-1179064:-1:exon

LOC119713700
type: Gene
subclass of: SO_0000704
RO_0002162: 8839
gene: LOC119713700
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1216108..1220908)
location: region:1216108-1220908:-1
so has part: feature:1216108-1220908:-1:exon
subclass of: SO_0000011

119713700
type: Gene
SIO_000068: ncbigene

position:1216108:-1
position: 1216108
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1220908:-1
position: 1220908
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1216108-1220908:-1:exon

LOC119713700
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 8839
nc RNA class: lncRNA
gene: LOC119713700
product: uncharacterized LOC119713700
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 16 samples with support for all annotated introns
transcript id: XR_005260909.1
SIO_010081: LOC119713700
subclass of: SO_0000673
so part of: LOC119713700
location: complement(join(1216108..1219316,1219403..1220908))
location: region:1216108-1220908:-1
so has part: feature:1219403-1220908:-1:exon
so has part: feature:1216108-1219316:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1219403-1220908:-1:exon

position:1219403:-1
position: 1219403
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1216108-1219316:-1:exon

position:1219316:-1
position: 1219316
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

FLI1
type: Gene
subclass of: SO_0000704
RO_0002162: 8839
gene: FLI1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1290305..1379420
location: region:1290305-1379420:1
so has part: feature:1290305-1379420:1:exon
subclass of: SO_0000010

101793892
type: Gene
SIO_000068: ncbigene

position:1290305:1
position: 1290305
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1379420:1
position: 1379420
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1290305-1379420:1:exon

FLI1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8839
gene: FLI1
product: Fli-1 proto-oncogene, ETS transcription factor, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 25 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 103 samples with support for all annotated introns
transcript id: XM_005019654.5
SIO_010081: FLI1
subclass of: SO_0000673
so part of: FLI1
location: join(1290305..1290691,1292542..1292650,1340583..1340794,1349165..1349319,1352609..1352812,1359343..1359411,1373002..1373067,1374366..1374428,1375708..1375755,1376833..1379420)
location: region:1290305-1379420:1
so has part: feature:1290305-1290691:1:exon
so has part: feature:1292542-1292650:1:exon
so has part: feature:1340583-1340794:1:exon
so has part: feature:1349165-1349319:1:exon
so has part: feature:1352609-1352812:1:exon
so has part: feature:1359343-1359411:1:exon
so has part: feature:1373002-1373067:1:exon
so has part: feature:1374366-1374428:1:exon
so has part: feature:1375708-1375755:1:exon
so has part: feature:1376833-1379420:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1290305-1290691:1:exon

position:1290691:1
position: 1290691
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1292542-1292650:1:exon

position:1292542:1
position: 1292542
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1292650:1
position: 1292650
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1340583-1340794:1:exon

position:1340583:1
position: 1340583
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1340794:1
position: 1340794
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1349165-1349319:1:exon

position:1349165:1
position: 1349165
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1349319:1
position: 1349319
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1352609-1352812:1:exon

position:1352609:1
position: 1352609
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1352812:1
position: 1352812
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1359343-1359411:1:exon

position:1359343:1
position: 1359343
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1359411:1
position: 1359411
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1373002-1373067:1:exon

position:1373002:1
position: 1373002
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1373067:1
position: 1373067
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1374366-1374428:1:exon

position:1374366:1
position: 1374366
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1374428:1
position: 1374428
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:1375708-1375755:1:exon

position:1375708:1
position: 1375708
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1375755:1
position: 1375755
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:1376833-1379420:1:exon

position:1376833:1
position: 1376833
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

FLI1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8839
gene: FLI1
product: Fli-1 proto-oncogene, ETS transcription factor, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 25 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 111 samples with support for all annotated introns
transcript id: XM_005019655.5
SIO_010081: FLI1
subclass of: SO_0000673
so part of: FLI1
location: join(1290305..1290691,1292542..1292623,1340583..1340794,1349165..1349319,1352609..1352812,1359343..1359411,1373002..1373067,1374366..1374428,1375708..1375755,1376833..1379420)
location: region:1290305-1379420:1
so has part: feature:1290305-1290691:1:exon
so has part: feature:1292542-1292623:1:exon
so has part: feature:1340583-1340794:1:exon
so has part: feature:1349165-1349319:1:exon
so has part: feature:1352609-1352812:1:exon
so has part: feature:1359343-1359411:1:exon
so has part: feature:1373002-1373067:1:exon
so has part: feature:1374366-1374428:1:exon
so has part: feature:1375708-1375755:1:exon
so has part: feature:1376833-1379420:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1290305-1290691:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1292542-1292623:1:exon

position:1292623:1
position: 1292623
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1340583-1340794:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1349165-1349319:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1352609-1352812:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1359343-1359411:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1373002-1373067:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1374366-1374428:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1375708-1375755:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1376833-1379420:1:exon

FLI1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8839
gene: FLI1
product: Fli-1 proto-oncogene, ETS transcription factor, transcript variant X5
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 19 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 111 samples with support for all annotated introns
transcript id: XM_005019657.5
SIO_010081: FLI1
subclass of: SO_0000673
so part of: FLI1
location: join(1290309..1290691,1292542..1292650,1340583..1340794,1349165..1349319,1352609..1352812,1359343..1359411,1374366..1374428,1375708..1375755,1376833..1379420)
location: region:1290309-1379420:1
so has part: feature:1290309-1290691:1:exon
so has part: feature:1292542-1292650:1:exon
so has part: feature:1340583-1340794:1:exon
so has part: feature:1349165-1349319:1:exon
so has part: feature:1352609-1352812:1:exon
so has part: feature:1359343-1359411:1:exon
so has part: feature:1374366-1374428:1:exon
so has part: feature:1375708-1375755:1:exon
so has part: feature:1376833-1379420:1:exon

position:1290309:1
position: 1290309
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1290309-1290691:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1292542-1292650:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1340583-1340794:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1349165-1349319:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1352609-1352812:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1359343-1359411:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1374366-1374428:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1375708-1375755:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1376833-1379420:1:exon

FLI1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8839
gene: FLI1
product: Fli-1 proto-oncogene, ETS transcription factor, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 25 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 37 samples with support for all annotated introns
transcript id: XM_038167598.1
SIO_010081: FLI1
subclass of: SO_0000673
so part of: FLI1
location: join(1292380..1292397,1292542..1292623,1340583..1340794,1349165..1349319,1352609..1352812,1359343..1359411,1373002..1373067,1374366..1374428,1375708..1375755,1376833..1379420)
location: region:1292380-1379420:1
so has part: feature:1292380-1292397:1:exon
so has part: feature:1292542-1292623:1:exon
so has part: feature:1340583-1340794:1:exon
so has part: feature:1349165-1349319:1:exon
so has part: feature:1352609-1352812:1:exon
so has part: feature:1359343-1359411:1:exon
so has part: feature:1373002-1373067:1:exon
so has part: feature:1374366-1374428:1:exon
so has part: feature:1375708-1375755:1:exon
so has part: feature:1376833-1379420:1:exon

position:1292380:1
position: 1292380
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1292380-1292397:1:exon

position:1292397:1
position: 1292397
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1292542-1292623:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1340583-1340794:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1349165-1349319:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1352609-1352812:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1359343-1359411:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1373002-1373067:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1374366-1374428:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1375708-1375755:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1376833-1379420:1:exon

FLI1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8839
gene: FLI1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: Friend leukemia integration 1 transcription factor isoform X1
translation: MFQTVPDTSSYVKVRHDSIFKQEALSVVSDDQSLFDSTYGAATHLPKADMTASGNPDYGQPHKINPLPPQQEWINQPVRVNVKREYDHMNGSRESPVDCSVNKCSKLVGAGTESNPMSYSTYMDEKNGPPPNMTTNERRVIVPADPTLWTQEHVRQWLEWAIKEYGLMEIDTTLFQNMDGKELCKMNKDDFLRTTSLYNTEVLLSHLSYLRESSSLLVYNTPSHTEASSRLATKEDPSYDAVRRTGWGSNMNSGLTKSPPVAGTQNVNKTTEQQRPQPDPYQILGPTSSRLANPGSGQIQLWQFLLELLSDSSNASCITWEGTNGEFKMTDPDEVARRWGERKSKPNMNYDKLSRALRYYYDKNIMTKVHGKRYAYKFDFHGIAQALQPHPTESSMYKYPSDISYMPSYHAHQQKVNFVPPHPSSMPVTSSSFFGAASPYWTSPTGSIYPNPNVPRHPNAHVSPHLGSYY
SIO_010081: FLI1
subclass of: SO_0000673
so part of: FLI1
location: join(1292585..1292650,1340583..1340794,1349165..1349319,1352609..1352812,1359343..1359411,1373002..1373067,1374366..1374428,1375708..1375755,1376833..1377362)
location: region:1292585-1377362:1
so has part: feature:1292585-1292650:1:exon
so has part: feature:1340583-1340794:1:exon
so has part: feature:1349165-1349319:1:exon
so has part: feature:1352609-1352812:1:exon
so has part: feature:1359343-1359411:1:exon
so has part: feature:1373002-1373067:1:exon
so has part: feature:1374366-1374428:1:exon
so has part: feature:1375708-1375755:1:exon
so has part: feature:1376833-1377362:1:exon

XP_005019711.1
type: Protein
SIO_000068: ncbiprotein

position:1292585:1
position: 1292585
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1377362:1
position: 1377362
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1292585-1292650:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1340583-1340794:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1349165-1349319:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1352609-1352812:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1359343-1359411:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1373002-1373067:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1374366-1374428:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1375708-1375755:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1376833-1377362:1:exon

FLI1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8839
gene: FLI1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: Friend leukemia integration 1 transcription factor isoform X4
translation: MFQTVPDTSSYVKVRHDSIFKQEALSVVSDDQSLFDSTYGAATHLPKADMTASGNPDYGQPHKINPLPPQQEWINQPVRVNVKREYDHMNGSRESPVDCSVNKCSKLVGAGTESNPMSYSTYMDEKNGPPPNMTTNERRVIVPADPTLWTQEHVRQWLEWAIKEYGLMEIDTTLFQNMDGKELCKMNKDDFLRTTSLYNTEVLLSHLSYLRESSSLLVYNTPSHTEASSRLATKEGPPVAGTQNVNKTTEQQRPQPDPYQILGPTSSRLANPGSGQIQLWQFLLELLSDSSNASCITWEGTNGEFKMTDPDEVARRWGERKSKPNMNYDKLSRALRYYYDKNIMTKVHGKRYAYKFDFHGIAQALQPHPTESSMYKYPSDISYMPSYHAHQQKVNFVPPHPSSMPVTSSSFFGAASPYWTSPTGSIYPNPNVPRHPNAHVSPHLGSYY
SIO_010081: FLI1
subclass of: SO_0000673
so part of: FLI1
location: join(1292585..1292650,1340583..1340794,1349165..1349319,1352609..1352812,1359343..1359411,1374366..1374428,1375708..1375755,1376833..1377362)
location: region:1292585-1377362:1
so has part: feature:1292585-1292650:1:exon
so has part: feature:1340583-1340794:1:exon
so has part: feature:1349165-1349319:1:exon
so has part: feature:1352609-1352812:1:exon
so has part: feature:1359343-1359411:1:exon
so has part: feature:1374366-1374428:1:exon
so has part: feature:1375708-1375755:1:exon
so has part: feature:1376833-1377362:1:exon

XP_005019714.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1292585-1292650:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1340583-1340794:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1349165-1349319:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1352609-1352812:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1359343-1359411:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1374366-1374428:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1375708-1375755:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1376833-1377362:1:exon

FLI1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8839
gene: FLI1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: Friend leukemia integration 1 transcription factor isoform X2
translation: MFQTVPDTSSYVKEALSVVSDDQSLFDSTYGAATHLPKADMTASGNPDYGQPHKINPLPPQQEWINQPVRVNVKREYDHMNGSRESPVDCSVNKCSKLVGAGTESNPMSYSTYMDEKNGPPPNMTTNERRVIVPADPTLWTQEHVRQWLEWAIKEYGLMEIDTTLFQNMDGKELCKMNKDDFLRTTSLYNTEVLLSHLSYLRESSSLLVYNTPSHTEASSRLATKEDPSYDAVRRTGWGSNMNSGLTKSPPVAGTQNVNKTTEQQRPQPDPYQILGPTSSRLANPGSGQIQLWQFLLELLSDSSNASCITWEGTNGEFKMTDPDEVARRWGERKSKPNMNYDKLSRALRYYYDKNIMTKVHGKRYAYKFDFHGIAQALQPHPTESSMYKYPSDISYMPSYHAHQQKVNFVPPHPSSMPVTSSSFFGAASPYWTSPTGSIYPNPNVPRHPNAHVSPHLGSYY
SIO_010081: FLI1
subclass of: SO_0000673
so part of: FLI1
location: join(1292585..1292623,1340583..1340794,1349165..1349319,1352609..1352812,1359343..1359411,1373002..1373067,1374366..1374428,1375708..1375755,1376833..1377362)
location: region:1292585-1377362:1
so has part: feature:1292585-1292623:1:exon
so has part: feature:1340583-1340794:1:exon
so has part: feature:1349165-1349319:1:exon
so has part: feature:1352609-1352812:1:exon
so has part: feature:1359343-1359411:1:exon
so has part: feature:1373002-1373067:1:exon
so has part: feature:1374366-1374428:1:exon
so has part: feature:1375708-1375755:1:exon
so has part: feature:1376833-1377362:1:exon

XP_038023526.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1292585-1292623:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1340583-1340794:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1349165-1349319:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1352609-1352812:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1359343-1359411:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1373002-1373067:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1374366-1374428:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1375708-1375755:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1376833-1377362:1:exon

FLI1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8839
gene: FLI1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: Friend leukemia integration 1 transcription factor isoform X2
translation: MFQTVPDTSSYVKEALSVVSDDQSLFDSTYGAATHLPKADMTASGNPDYGQPHKINPLPPQQEWINQPVRVNVKREYDHMNGSRESPVDCSVNKCSKLVGAGTESNPMSYSTYMDEKNGPPPNMTTNERRVIVPADPTLWTQEHVRQWLEWAIKEYGLMEIDTTLFQNMDGKELCKMNKDDFLRTTSLYNTEVLLSHLSYLRESSSLLVYNTPSHTEASSRLATKEDPSYDAVRRTGWGSNMNSGLTKSPPVAGTQNVNKTTEQQRPQPDPYQILGPTSSRLANPGSGQIQLWQFLLELLSDSSNASCITWEGTNGEFKMTDPDEVARRWGERKSKPNMNYDKLSRALRYYYDKNIMTKVHGKRYAYKFDFHGIAQALQPHPTESSMYKYPSDISYMPSYHAHQQKVNFVPPHPSSMPVTSSSFFGAASPYWTSPTGSIYPNPNVPRHPNAHVSPHLGSYY
SIO_010081: FLI1
subclass of: SO_0000673
so part of: FLI1
location: join(1292585..1292623,1340583..1340794,1349165..1349319,1352609..1352812,1359343..1359411,1373002..1373067,1374366..1374428,1375708..1375755,1376833..1377362)
location: region:1292585-1377362:1
so has part: feature:1292585-1292623:1:exon
so has part: feature:1340583-1340794:1:exon
so has part: feature:1349165-1349319:1:exon
so has part: feature:1352609-1352812:1:exon
so has part: feature:1359343-1359411:1:exon
so has part: feature:1373002-1373067:1:exon
so has part: feature:1374366-1374428:1:exon
so has part: feature:1375708-1375755:1:exon
so has part: feature:1376833-1377362:1:exon

XP_005019712.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1292585-1292623:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1340583-1340794:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1349165-1349319:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1352609-1352812:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1359343-1359411:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1373002-1373067:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1374366-1374428:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1375708-1375755:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1376833-1377362:1:exon

LOC119713709
type: Gene
subclass of: SO_0000704
RO_0002162: 8839
gene: LOC119713709
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1294142..1304079)
location: region:1294142-1304079:-1
so has part: feature:1294142-1304079:-1:exon
subclass of: SO_0000011

119713709
type: Gene
SIO_000068: ncbigene

position:1294142:-1
position: 1294142
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1304079:-1
position: 1304079
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1294142-1304079:-1:exon

LOC119713709
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 8839
nc RNA class: lncRNA
gene: LOC119713709
product: uncharacterized LOC119713709
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 13 samples with support for all annotated introns
transcript id: XR_005260924.1
SIO_010081: LOC119713709
subclass of: SO_0000673
so part of: LOC119713709
location: complement(join(1294142..1295556,1303745..1304079))
location: region:1294142-1304079:-1
so has part: feature:1303745-1304079:-1:exon
so has part: feature:1294142-1295556:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1303745-1304079:-1:exon

position:1303745:-1
position: 1303745
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1294142-1295556:-1:exon

position:1295556:-1
position: 1295556
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

FLI1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8839
gene: FLI1
product: Fli-1 proto-oncogene, ETS transcription factor, transcript variant X6
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 25 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 75 samples with support for all annotated introns
transcript id: XM_005019658.5
SIO_010081: FLI1
subclass of: SO_0000673
so part of: FLI1
location: join(1301467..1301596,1340583..1340794,1349165..1349319,1352609..1352812,1359343..1359411,1373002..1373067,1374366..1374428,1375708..1375755,1376833..1379420)
location: region:1301467-1379420:1
so has part: feature:1301467-1301596:1:exon
so has part: feature:1340583-1340794:1:exon
so has part: feature:1349165-1349319:1:exon
so has part: feature:1352609-1352812:1:exon
so has part: feature:1359343-1359411:1:exon
so has part: feature:1373002-1373067:1:exon
so has part: feature:1374366-1374428:1:exon
so has part: feature:1375708-1375755:1:exon
so has part: feature:1376833-1379420:1:exon

position:1301467:1
position: 1301467
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1301467-1301596:1:exon

position:1301596:1
position: 1301596
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1340583-1340794:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1349165-1349319:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1352609-1352812:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1359343-1359411:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1373002-1373067:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1374366-1374428:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1375708-1375755:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1376833-1379420:1:exon

FLI1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8839
gene: FLI1
product: Fli-1 proto-oncogene, ETS transcription factor, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 25 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 114 samples with support for all annotated introns
transcript id: XM_005019656.5
SIO_010081: FLI1
subclass of: SO_0000673
so part of: FLI1
location: join(1302685..1303232,1340583..1340794,1349165..1349319,1352609..1352812,1359343..1359411,1373002..1373067,1374366..1374428,1375708..1375755,1376833..1379420)
location: region:1302685-1379420:1
so has part: feature:1302685-1303232:1:exon
so has part: feature:1340583-1340794:1:exon
so has part: feature:1349165-1349319:1:exon
so has part: feature:1352609-1352812:1:exon
so has part: feature:1359343-1359411:1:exon
so has part: feature:1373002-1373067:1:exon
so has part: feature:1374366-1374428:1:exon
so has part: feature:1375708-1375755:1:exon
so has part: feature:1376833-1379420:1:exon

position:1302685:1
position: 1302685
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1302685-1303232:1:exon

position:1303232:1
position: 1303232
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1340583-1340794:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1349165-1349319:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1352609-1352812:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1359343-1359411:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1373002-1373067:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1374366-1374428:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1375708-1375755:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1376833-1379420:1:exon

FLI1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8839
gene: FLI1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: Friend leukemia integration 1 transcription factor isoform X3
translation: MDGTIKEALSVVSDDQSLFDSTYGAATHLPKADMTASGNPDYGQPHKINPLPPQQEWINQPVRVNVKREYDHMNGSRESPVDCSVNKCSKLVGAGTESNPMSYSTYMDEKNGPPPNMTTNERRVIVPADPTLWTQEHVRQWLEWAIKEYGLMEIDTTLFQNMDGKELCKMNKDDFLRTTSLYNTEVLLSHLSYLRESSSLLVYNTPSHTEASSRLATKEDPSYDAVRRTGWGSNMNSGLTKSPPVAGTQNVNKTTEQQRPQPDPYQILGPTSSRLANPGSGQIQLWQFLLELLSDSSNASCITWEGTNGEFKMTDPDEVARRWGERKSKPNMNYDKLSRALRYYYDKNIMTKVHGKRYAYKFDFHGIAQALQPHPTESSMYKYPSDISYMPSYHAHQQKVNFVPPHPSSMPVTSSSFFGAASPYWTSPTGSIYPNPNVPRHPNAHVSPHLGSYY
SIO_010081: FLI1
subclass of: SO_0000673
so part of: FLI1
location: join(1303215..1303232,1340583..1340794,1349165..1349319,1352609..1352812,1359343..1359411,1373002..1373067,1374366..1374428,1375708..1375755,1376833..1377362)
location: region:1303215-1377362:1
so has part: feature:1303215-1303232:1:exon
so has part: feature:1340583-1340794:1:exon
so has part: feature:1349165-1349319:1:exon
so has part: feature:1352609-1352812:1:exon
so has part: feature:1359343-1359411:1:exon
so has part: feature:1373002-1373067:1:exon
so has part: feature:1374366-1374428:1:exon
so has part: feature:1375708-1375755:1:exon
so has part: feature:1376833-1377362:1:exon

XP_005019713.1
type: Protein
SIO_000068: ncbiprotein

position:1303215:1
position: 1303215
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1303215-1303232:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1340583-1340794:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1349165-1349319:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1352609-1352812:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1359343-1359411:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1373002-1373067:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1374366-1374428:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1375708-1375755:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1376833-1377362:1:exon

FLI1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8839
gene: FLI1
product: Fli-1 proto-oncogene, ETS transcription factor, transcript variant X7
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 16 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 18 samples with support for all annotated introns
transcript id: XM_021272489.3
SIO_010081: FLI1
subclass of: SO_0000673
so part of: FLI1
location: join(1315271..1315293,1340583..1340794,1349165..1349319,1352609..1352812,1359343..1359411,1373002..1373067,1374366..1374428,1375708..1375755,1376833..1379420)
location: region:1315271-1379420:1
so has part: feature:1315271-1315293:1:exon
so has part: feature:1340583-1340794:1:exon
so has part: feature:1349165-1349319:1:exon
so has part: feature:1352609-1352812:1:exon
so has part: feature:1359343-1359411:1:exon
so has part: feature:1373002-1373067:1:exon
so has part: feature:1374366-1374428:1:exon
so has part: feature:1375708-1375755:1:exon
so has part: feature:1376833-1379420:1:exon

position:1315271:1
position: 1315271
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1315271-1315293:1:exon

position:1315293:1
position: 1315293
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1340583-1340794:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1349165-1349319:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1352609-1352812:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1359343-1359411:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1373002-1373067:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1374366-1374428:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1375708-1375755:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1376833-1379420:1:exon

FLI1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8839
gene: FLI1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: Friend leukemia integration 1 transcription factor isoform X5
translation: MTASGNPDYGQPHKINPLPPQQEWINQPVRVNVKREYDHMNGSRESPVDCSVNKCSKLVGAGTESNPMSYSTYMDEKNGPPPNMTTNERRVIVPADPTLWTQEHVRQWLEWAIKEYGLMEIDTTLFQNMDGKELCKMNKDDFLRTTSLYNTEVLLSHLSYLRESSSLLVYNTPSHTEASSRLATKEDPSYDAVRRTGWGSNMNSGLTKSPPVAGTQNVNKTTEQQRPQPDPYQILGPTSSRLANPGSGQIQLWQFLLELLSDSSNASCITWEGTNGEFKMTDPDEVARRWGERKSKPNMNYDKLSRALRYYYDKNIMTKVHGKRYAYKFDFHGIAQALQPHPTESSMYKYPSDISYMPSYHAHQQKVNFVPPHPSSMPVTSSSFFGAASPYWTSPTGSIYPNPNVPRHPNAHVSPHLGSYY
SIO_010081: FLI1
subclass of: SO_0000673
so part of: FLI1
location: join(1340664..1340794,1349165..1349319,1352609..1352812,1359343..1359411,1373002..1373067,1374366..1374428,1375708..1375755,1376833..1377362)
location: region:1340664-1377362:1
so has part: feature:1340664-1340794:1:exon
so has part: feature:1349165-1349319:1:exon
so has part: feature:1352609-1352812:1:exon
so has part: feature:1359343-1359411:1:exon
so has part: feature:1373002-1373067:1:exon
so has part: feature:1374366-1374428:1:exon
so has part: feature:1375708-1375755:1:exon
so has part: feature:1376833-1377362:1:exon

XP_021128164.1
type: Protein
SIO_000068: ncbiprotein

position:1340664:1
position: 1340664
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1340664-1340794:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1349165-1349319:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1352609-1352812:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1359343-1359411:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1373002-1373067:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1374366-1374428:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1375708-1375755:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1376833-1377362:1:exon

FLI1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8839
gene: FLI1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: Friend leukemia integration 1 transcription factor isoform X5
translation: MTASGNPDYGQPHKINPLPPQQEWINQPVRVNVKREYDHMNGSRESPVDCSVNKCSKLVGAGTESNPMSYSTYMDEKNGPPPNMTTNERRVIVPADPTLWTQEHVRQWLEWAIKEYGLMEIDTTLFQNMDGKELCKMNKDDFLRTTSLYNTEVLLSHLSYLRESSSLLVYNTPSHTEASSRLATKEDPSYDAVRRTGWGSNMNSGLTKSPPVAGTQNVNKTTEQQRPQPDPYQILGPTSSRLANPGSGQIQLWQFLLELLSDSSNASCITWEGTNGEFKMTDPDEVARRWGERKSKPNMNYDKLSRALRYYYDKNIMTKVHGKRYAYKFDFHGIAQALQPHPTESSMYKYPSDISYMPSYHAHQQKVNFVPPHPSSMPVTSSSFFGAASPYWTSPTGSIYPNPNVPRHPNAHVSPHLGSYY
SIO_010081: FLI1
subclass of: SO_0000673
so part of: FLI1
location: join(1340664..1340794,1349165..1349319,1352609..1352812,1359343..1359411,1373002..1373067,1374366..1374428,1375708..1375755,1376833..1377362)
location: region:1340664-1377362:1
so has part: feature:1340664-1340794:1:exon
so has part: feature:1349165-1349319:1:exon
so has part: feature:1352609-1352812:1:exon
so has part: feature:1359343-1359411:1:exon
so has part: feature:1373002-1373067:1:exon
so has part: feature:1374366-1374428:1:exon
so has part: feature:1375708-1375755:1:exon
so has part: feature:1376833-1377362:1:exon

XP_005019715.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1340664-1340794:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1349165-1349319:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1352609-1352812:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1359343-1359411:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1373002-1373067:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1374366-1374428:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1375708-1375755:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1376833-1377362:1:exon

KCNJ1
type: Gene
subclass of: SO_0000704
RO_0002162: 8839
gene: KCNJ1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1389438..1407785)
location: region:1389438-1407785:-1
so has part: feature:1389438-1407785:-1:exon
subclass of: SO_0000010

101793713
type: Gene
SIO_000068: ncbigene

position:1389438:-1
position: 1389438
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1407785:-1
position: 1407785
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1389438-1407785:-1:exon

KCNJ1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8839
gene: KCNJ1
product: potassium inwardly rectifying channel subfamily J member 1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 18 Proteins, and 62% coverage of the annotated genomic feature by RNAseq alignments, including 8 samples with support for all annotated introns
transcript id: XM_038167599.1
SIO_010081: KCNJ1
subclass of: SO_0000673
so part of: KCNJ1
location: complement(join(1389438..1391102,1407606..1407785))
location: region:1389438-1407785:-1
so has part: feature:1407606-1407785:-1:exon
so has part: feature:1389438-1391102:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1407606-1407785:-1:exon

position:1407606:-1
position: 1407606
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1389438-1391102:-1:exon

position:1391102:-1
position: 1391102
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

KCNJ1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8839
gene: KCNJ1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: ATP-sensitive inward rectifier potassium channel 1
translation: MFNYLRKRFASHITERSRRRTRLVSKDGRCNIEFGNVEQSRFVFLVDIWTTILDLRWRYKMTIFISAFLGSWFLFGLLWYVVAYIHKDLPEFNPSINHTPCVENINGLTSAFLFSLETQVTIGYGFRCVTEQCVTAIFLLIFQSILGVIINSFMCGAILAKISRSKNRAKTITFSKNAVISKRGGKLCLLIRVANLRKSLLIGSHIYGKLLKTTITPEGETIILDQVNIEFIVDAGNENLFFISPLTIYHIIDKNSPFFHTAAETILQQDFELVVFLDGTVEATSATCQVRTSYIPEEVLWGYRFAPIVSKTKEGKYRVDFQNFSKTVAVETPHCAFCLYNEKEAKAKEKKGYDNPGFVLSESSETSDTKM
SIO_010081: KCNJ1
subclass of: SO_0000673
so part of: KCNJ1
location: complement(1389968..1391083)
location: region:1389968-1391083:-1
so has part: feature:1389968-1391083:-1:exon

XP_038023527.1
type: Protein
SIO_000068: ncbiprotein

position:1389968:-1
position: 1389968
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1391083:-1
position: 1391083
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1389968-1391083:-1:exon

KCNJ5
type: Gene
subclass of: SO_0000704
RO_0002162: 8839
gene: KCNJ5
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1424309..1445358
location: region:1424309-1445358:1
so has part: feature:1424309-1445358:1:exon
subclass of: SO_0000010

101793401
type: Gene
SIO_000068: ncbigene

position:1424309:1
position: 1424309
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1445358:1
position: 1445358
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1424309-1445358:1:exon

KCNJ5
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8839
gene: KCNJ5
product: potassium inwardly rectifying channel subfamily J member 5, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 49 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 31 samples with support for all annotated introns
transcript id: XM_013099629.4
SIO_010081: KCNJ5
subclass of: SO_0000673
so part of: KCNJ5
location: join(1424309..1424406,1424840..1425014,1433085..1434031,1444548..1445358)
location: region:1424309-1445358:1
so has part: feature:1424309-1424406:1:exon
so has part: feature:1424840-1425014:1:exon
so has part: feature:1433085-1434031:1:exon
so has part: feature:1444548-1445358:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1424309-1424406:1:exon

position:1424406:1
position: 1424406
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1424840-1425014:1:exon

position:1424840:1
position: 1424840
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1425014:1
position: 1425014
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1433085-1434031:1:exon

position:1433085:1
position: 1433085
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1434031:1
position: 1434031
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1444548-1445358:1:exon

position:1444548:1
position: 1444548
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

KCNJ5
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8839
gene: KCNJ5
product: potassium inwardly rectifying channel subfamily J member 5, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 16 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 12 samples with support for all annotated introns
transcript id: XM_021272490.3
SIO_010081: KCNJ5
subclass of: SO_0000673
so part of: KCNJ5
location: join(1424497..1425014,1433085..1434031,1437253..1438633)
location: region:1424497-1438633:1
so has part: feature:1424497-1425014:1:exon
so has part: feature:1433085-1434031:1:exon
so has part: feature:1437253-1438633:1:exon

position:1424497:1
position: 1424497
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1438633:1
position: 1438633
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1424497-1425014:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1433085-1434031:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1437253-1438633:1:exon

position:1437253:1
position: 1437253
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

KCNJ5
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8839
gene: KCNJ5
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: G protein-activated inward rectifier potassium channel 4 isoform X1
translation: MAGDSRIFMNQDMDIGVVSREPKKIPKQARDDVPIATDRTRLISAEGKKPRQRYMEKSGKCNVHHGNVQETYRYLSDLFTTLVDLKWRFNLLVFTMVYTITWLFFGFIWWLIAYIRGDLDHLEDENWIPCVENLSGFVSAFLFSIETETTIGYGYRVITEKCPEGIVLLLIQAILGSIVNAFMVGCMFVKISQPKKRAETLMFSNNAVISMRDEKLCLMFRVGDLRNSHIVEASIRAKLIKSKQTKEGEFIPLNQTDINVGFDTGDDRLFLVSPLIISHEINEKSPFWEMSRTQLEKEEFEIVVILEGMVEATGMTCQARSSYMDTEVLWGHRFTPVLTLEKDFYEVDYNSFHSTYETNTPVCCAKELAESRREGQLLSHLSSATLLSGGREAETARGEEEEEEEDREPAGMNGANGTAGEVKENLPV
SIO_010081: KCNJ5
subclass of: SO_0000673
so part of: KCNJ5
location: join(1433092..1434031,1444548..1444894)
location: region:1433092-1444894:1
so has part: feature:1433092-1434031:1:exon
so has part: feature:1444548-1444894:1:exon

XP_012955083.1
type: Protein
SIO_000068: ncbiprotein

position:1433092:1
position: 1433092
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1444894:1
position: 1444894
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1433092-1434031:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1444548-1444894:1:exon

KCNJ5
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8839
gene: KCNJ5
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: G protein-activated inward rectifier potassium channel 4 isoform X2
translation: MAGDSRIFMNQDMDIGVVSREPKKIPKQARDDVPIATDRTRLISAEGKKPRQRYMEKSGKCNVHHGNVQETYRYLSDLFTTLVDLKWRFNLLVFTMVYTITWLFFGFIWWLIAYIRGDLDHLEDENWIPCVENLSGFVSAFLFSIETETTIGYGYRVITEKCPEGIVLLLIQAILGSIVNAFMVGCMFVKISQPKKRAETLMFSNNAVISMRDEKLCLMFRVGDLRNSHIVEASIRAKLIKSKQTKEGEFIPLNQTDINVGFDTGDDRLFLVSPLIISHEINEKSPFWEMSRTQLEKEEFEIVVILEGMVEATDLNFLKG
SIO_010081: KCNJ5
subclass of: SO_0000673
so part of: KCNJ5
location: join(1433092..1434031,1437253..1437275)
location: region:1433092-1437275:1
so has part: feature:1433092-1434031:1:exon
so has part: feature:1437253-1437275:1:exon

XP_021128165.2
type: Protein
SIO_000068: ncbiprotein

position:1437275:1
position: 1437275
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1433092-1434031:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1437253-1437275:1:exon

LOC106017134
type: Gene
subclass of: SO_0000704
RO_0002162: 8839
gene: LOC106017134
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1465481..1507052
location: region:1465481-1507052:1
so has part: feature:1465481-1507052:1:exon
subclass of: SO_0000011

106017134
type: Gene
SIO_000068: ncbigene

position:1465481:1
position: 1465481
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1507052:1
position: 1507052
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1465481-1507052:1:exon

LOC106017134
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 8839
nc RNA class: lncRNA
gene: LOC106017134
product: uncharacterized LOC106017134, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 8 samples with support for all annotated introns
transcript id: XR_002402225.3
SIO_010081: LOC106017134
subclass of: SO_0000673
so part of: LOC106017134
location: join(1465481..1465721,1469506..1469623,1504550..1504790,1504936..1507052)
location: region:1465481-1507052:1
so has part: feature:1465481-1465721:1:exon
so has part: feature:1469506-1469623:1:exon
so has part: feature:1504550-1504790:1:exon
so has part: feature:1504936-1507052:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1465481-1465721:1:exon

position:1465721:1
position: 1465721
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1469506-1469623:1:exon

position:1469506:1
position: 1469506
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1469623:1
position: 1469623
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1504550-1504790:1:exon

position:1504550:1
position: 1504550
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1504790:1
position: 1504790
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1504936-1507052:1:exon

position:1504936:1
position: 1504936
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC106017134
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 8839
nc RNA class: lncRNA
gene: LOC106017134
product: uncharacterized LOC106017134, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 12 samples with support for all annotated introns
transcript id: XR_001190382.4
SIO_010081: LOC106017134
subclass of: SO_0000673
so part of: LOC106017134
location: join(1465481..1465721,1469506..1469623,1479060..1480648)
location: region:1465481-1480648:1
so has part: feature:1465481-1465721:1:exon
so has part: feature:1469506-1469623:1:exon
so has part: feature:1479060-1480648:1:exon

position:1480648:1
position: 1480648
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1465481-1465721:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1469506-1469623:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1479060-1480648:1:exon

position:1479060:1
position: 1479060
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

ARHGAP32
type: Gene
subclass of: SO_0000704
RO_0002162: 8839
gene: ARHGAP32
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1489180..1749559)
location: region:1489180-1749559:-1
so has part: feature:1489180-1749559:-1:exon
subclass of: SO_0000010

101794549
type: Gene
SIO_000068: ncbigene

position:1489180:-1
position: 1489180
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1749559:-1
position: 1749559
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1489180-1749559:-1:exon

ARHGAP32
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8839
gene: ARHGAP32
product: Rho GTPase activating protein 32
exception: unclassified transcription discrepancy
note: The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: inserted 2 bases in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 16 samples with support for all annotated introns
transcript id: XM_038167597.1
SIO_010081: ARHGAP32
subclass of: SO_0000673
so part of: ARHGAP32
location: complement(join(1489180..1496026,1496936..1497858,1498513..1499368,1499985..1500059,1501241..1501386,1502173..1502374,1504577..1504722,1505992..1506099,1508649..1508731,1509413..1509557,1512738..1512840,1528797..1528946,1549657..1549707,1555793..1555874,1565348..1565425,1567610..1567732,1569431..1569523,1571676..1571813,1590062..1590148,1627491..1627575,1627946..1627987,1629023..1629114,1648781..1648889,1749296..1749559))
location: region:1489180-1749559:-1
so has part: feature:1749296-1749559:-1:exon
so has part: feature:1648781-1648889:-1:exon
so has part: feature:1629023-1629114:-1:exon
so has part: feature:1627946-1627987:-1:exon
so has part: feature:1627491-1627575:-1:exon
so has part: feature:1590062-1590148:-1:exon
so has part: feature:1571676-1571813:-1:exon
so has part: feature:1569431-1569523:-1:exon
so has part: feature:1567610-1567732:-1:exon
so has part: feature:1565348-1565425:-1:exon
so has part: feature:1555793-1555874:-1:exon
so has part: feature:1549657-1549707:-1:exon
so has part: feature:1528797-1528946:-1:exon
so has part: feature:1512738-1512840:-1:exon
so has part: feature:1509413-1509557:-1:exon
so has part: feature:1508649-1508731:-1:exon
so has part: feature:1505992-1506099:-1:exon
so has part: feature:1504577-1504722:-1:exon
so has part: feature:1502173-1502374:-1:exon
so has part: feature:1501241-1501386:-1:exon
so has part: feature:1499985-1500059:-1:exon
so has part: feature:1498513-1499368:-1:exon
so has part: feature:1496936-1497858:-1:exon
so has part: feature:1489180-1496026:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1749296-1749559:-1:exon

position:1749296:-1
position: 1749296
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1648781-1648889:-1:exon

position:1648781:-1
position: 1648781
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1648889:-1
position: 1648889
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1629023-1629114:-1:exon

position:1629023:-1
position: 1629023
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1629114:-1
position: 1629114
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1627946-1627987:-1:exon

position:1627946:-1
position: 1627946
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1627987:-1
position: 1627987
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1627491-1627575:-1:exon

position:1627491:-1
position: 1627491
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1627575:-1
position: 1627575
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1590062-1590148:-1:exon

position:1590062:-1
position: 1590062
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1590148:-1
position: 1590148
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1571676-1571813:-1:exon

position:1571676:-1
position: 1571676
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1571813:-1
position: 1571813
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1569431-1569523:-1:exon

position:1569431:-1
position: 1569431
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1569523:-1
position: 1569523
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:1567610-1567732:-1:exon

position:1567610:-1
position: 1567610
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1567732:-1
position: 1567732
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:1565348-1565425:-1:exon

position:1565348:-1
position: 1565348
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1565425:-1
position: 1565425
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:1555793-1555874:-1:exon

position:1555793:-1
position: 1555793
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1555874:-1
position: 1555874
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:1549657-1549707:-1:exon

position:1549657:-1
position: 1549657
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1549707:-1
position: 1549707
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:1528797-1528946:-1:exon

position:1528797:-1
position: 1528797
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1528946:-1
position: 1528946
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:1512738-1512840:-1:exon

position:1512738:-1
position: 1512738
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1512840:-1
position: 1512840
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:1509413-1509557:-1:exon

position:1509413:-1
position: 1509413
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1509557:-1
position: 1509557
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:1508649-1508731:-1:exon

position:1508649:-1
position: 1508649
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1508731:-1
position: 1508731
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:1505992-1506099:-1:exon

position:1505992:-1
position: 1505992
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1506099:-1
position: 1506099
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:1504577-1504722:-1:exon

position:1504577:-1
position: 1504577
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1504722:-1
position: 1504722
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:1502173-1502374:-1:exon

position:1502173:-1
position: 1502173
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1502374:-1
position: 1502374
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:1501241-1501386:-1:exon

position:1501241:-1
position: 1501241
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1501386:-1
position: 1501386
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:1499985-1500059:-1:exon

position:1499985:-1
position: 1499985
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1500059:-1
position: 1500059
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 22
SIO_000628: feature:1498513-1499368:-1:exon

position:1498513:-1
position: 1498513
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1499368:-1
position: 1499368
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 23
SIO_000628: feature:1496936-1497858:-1:exon

position:1496936:-1
position: 1496936
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1497858:-1
position: 1497858
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 24
SIO_000628: feature:1489180-1496026:-1:exon

position:1496026:-1
position: 1496026
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

ARHGAP32
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8839
gene: ARHGAP32
exception: unclassified translation discrepancy
note: The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: inserted 2 bases in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: LOW QUALITY PROTEIN: rho GTPase-activating protein 32
translation: MMKSSVHAEEDDFVPELQRSIHPRERPDWEETLSAMARGADIPDIPGELPLRTCGSTASMKVKNVKKYINPGLMGCDAFHRLSFTKGHFPKMAECAHFHYENVDFGNIQLSLPEEQNEVTRNGCESKELVYLVQISCQGRSWIVKRSYEDFRVLDKHLHLCIYDRRFSQLSELPRSDALKDSPELVSHMLTSYLSRLSAIAGNKINCGPALTWMEIDNKGNHLLVHEESSINVPAIAAAHVIKRYIAQAGDELSFEVGDIVSVIDMPPKELTTWWRGKHGFQVGFFPSECVELINDKVPQSVTNSVPKPVSPAHGARPASWSYFPPLSKKHGKLITFLRTFMKSRPTKQKLKQRGILKERVFGCDLGEHLLNSGHDVPQVLKSCTEFIEKHGIVDGIYRLSGVASNIQKLRHEFDSEQIPDLTKDTYVQDIHSVGSLCKLYFRELPNPLLTYQLYDKFSDAVSAATDEERLVKIHDVIQQLPPPHYRTLEFLMRHLARLADYCSVTNMHAKNLAIVWAPNLLRSKQIESACFSGTAAFMEVRIQSVVVEFILNHVDVLFSSKLSSVIRDGAGHSSLSRPKSLLVSSPSTKLLTLEEAQARTQAQINSPIVADSRYIEVGEGPAALQGKFHTVIDFPSERKRPPNKMKKSPVGSWRSFFNLGKSSSVSKRKLQRNPSEPSEMKAIALAGGRGDSGTLRSAKSEESLTSLHAVDGETKLFRPRRPRSSSDALSASFNGELLGNMNRCNSYDNLPHXTDSDGDEGIIHVPALISPRSSEDVDLSPPDIGVASLDFDPMSFQCSTPQAESECLESSTSPMESVGINKEKPSLFKKDVESGSQSHTPGSATSSEPVSPFQEKMSPFFTMDMSPTEEKACKPHAFSPKTERKPIKSPPLTTSEPVSFALPSRMSEPTGGVPITTRNSSASNWSKGIGLTEMTNRSPTQMSLPLKSNETGAGEGAQQELLHAQLVAAGKPELPEEGERPMSSSQNKTVPTGHTQPGAVALDSPQDPVPVSSVSLIPPPPPKNPARMLALALAESAQQASAQSQKRPGDTHSESTNYGETEAGTALEKLHISAGAPDKLHLYTSLPENRLHFQPGAPVEQDFQGSSTAGEQNHLSGAPGARDPPPLHSGMPGDMPASRDAEQEQSSFHPGKSGDKDHFPSHAGDREHTQHHTPGAPPDWEPPTPDMPVDKPQLRACMPGDKHLAPACTADDKLQTPPVVTAGEKSTLASMPYLTTIQTTATEPSHGPASQHATGPATTQTDSIVTATQRTLAASQPAMSQRQDHQSAMGQVPAASAKATSGSSQVWGATAPEKPPDPAPVFASENSSTTRCSSSVPTGHQSHVEKPRESTRAPPLHLRSESVPTHSSYSFTPPVPPVRTLESKIAAAMHSNNTDAINNSNYHAFLASSMLASSVEEALLPPPPPPPPKHASLQSIYVPHPKPESIPEPSGPDNYLHHKPTSSHTYRPESVPPHISYHSKPDQHQAYPPRSETPTSASTRYNTYTNQGKSTSTVHSKPRSRTEFVSSVSPTGLRNTSYTEDAPPYPTIRRVQSLHVPTPAAAAIRSVPISRTEVPPDDEPVYCPRPLYQYKPYQPHSDYHVTQLQPYFENGRVHYRYSPYSSSSGSSYYTTADGNFYDLDPYSTVRAKPFHPLPSREFASYASRLQSKGLYRYPGLSAYPRGGLISHLAGKEHSFISRDVPPAPDIKHMYMSWDLEDMEKYRMQSIRRESRTRQKVKGPVMSQYDNVAPLLPDDLGGLDVIHLRSKSDPGKTGLLTVAEGKEGRYPAKAATPEGDERYYMQHPEPELDRAHYHGAYGNGPSEKPSLPQKQSSIRSRKLHEPGCSTNEHRTHLQQEGSHRQPSESKNGPPYPDYRPKGGPEPSEPVGYQHSGGKYMPVNQDTLRLNHKEVKLADDRQDLERPRAKPSTSMEKQTRDCYKEEEHAASPMAPPPKPERSHSLRMQHPESMERDSALLYPYQTLGKRQSTMTVMSQYDNLEDY…
SIO_010081: ARHGAP32
subclass of: SO_0000673
so part of: ARHGAP32
location: complement(join(1493774..1496026,1496936..1497858,1498513..1499368,1499985..1500059,1501241..1501386,1502173..1502374,1504577..1504722,1505992..1506099,1508649..1508731,1509413..1509557,1512738..1512840,1528797..1528946,1549657..1549707,1555793..1555874,1565348..1565425,1567610..1567732,1569431..1569523,1571676..1571813,1590062..1590148,1627491..1627575,1627946..1627987,1629023..1629114,1648781..1648888))
location: region:1493774-1648888:-1
so has part: feature:1648781-1648888:-1:exon
so has part: feature:1629023-1629114:-1:exon
so has part: feature:1627946-1627987:-1:exon
so has part: feature:1627491-1627575:-1:exon
so has part: feature:1590062-1590148:-1:exon
so has part: feature:1571676-1571813:-1:exon
so has part: feature:1569431-1569523:-1:exon
so has part: feature:1567610-1567732:-1:exon
so has part: feature:1565348-1565425:-1:exon
so has part: feature:1555793-1555874:-1:exon
so has part: feature:1549657-1549707:-1:exon
so has part: feature:1528797-1528946:-1:exon
so has part: feature:1512738-1512840:-1:exon
so has part: feature:1509413-1509557:-1:exon
so has part: feature:1508649-1508731:-1:exon
so has part: feature:1505992-1506099:-1:exon
so has part: feature:1504577-1504722:-1:exon
so has part: feature:1502173-1502374:-1:exon
so has part: feature:1501241-1501386:-1:exon
so has part: feature:1499985-1500059:-1:exon
so has part: feature:1498513-1499368:-1:exon
so has part: feature:1496936-1497858:-1:exon
so has part: feature:1493774-1496026:-1:exon

XP_038023525.1
type: Protein
SIO_000068: ncbiprotein

position:1493774:-1
position: 1493774
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1648888:-1
position: 1648888
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1648781-1648888:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1629023-1629114:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1627946-1627987:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1627491-1627575:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1590062-1590148:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1571676-1571813:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1569431-1569523:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1567610-1567732:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1565348-1565425:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1555793-1555874:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1549657-1549707:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1528797-1528946:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1512738-1512840:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1509413-1509557:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1508649-1508731:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1505992-1506099:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1504577-1504722:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:1502173-1502374:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:1501241-1501386:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:1499985-1500059:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:1498513-1499368:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:1496936-1497858:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:1493774-1496026:-1:exon

TRNAP-AGG
type: Gene
subclass of: SO_0000704
RO_0002162: 8839
gene: TRNAP-AGG
note: Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
so part of: sequence
location: 1698829..1698900
location: region:1698829-1698900:1
so has part: feature:1698829-1698900:1:exon
subclass of: SO_0000663

110352743
type: Gene
SIO_000068: ncbigene

position:1698829:1
position: 1698829
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1698900:1
position: 1698900
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1698829-1698900:1:exon

TRNAP-AGG
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 8839
gene: TRNAP-AGG
product: tRNA-Pro
inference: COORDINATES: profile:tRNAscan-SE:2.0.4
note: transfer RNA proline (anticodon AGG); Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
anticodon: (pos:1698861..1698863,aa:Pro,seq:agg)
SIO_010081: TRNAP-AGG
subclass of: SO_0000673
so part of: TRNAP-AGG
location: 1698829..1698900
location: region:1698829-1698900:1
so has part: feature:1698829-1698900:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1698829-1698900:1:exon

BARX2
type: Gene
subclass of: SO_0000704
RO_0002162: 8839
gene: BARX2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1791543..1827606
location: region:1791543-1827606:1
so has part: feature:1791543-1827606:1:exon
subclass of: SO_0000010

101799373
type: Gene
SIO_000068: ncbigene

position:1791543:1
position: 1791543
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1827606:1
position: 1827606
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1791543-1827606:1:exon

BARX2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8839
gene: BARX2
product: BARX homeobox 2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 95 samples with support for all annotated introns
transcript id: XM_027444309.2
SIO_010081: BARX2
subclass of: SO_0000673
so part of: BARX2
location: join(1791543..1792060,1821665..1821962,1824937..1825021,1826267..1827606)
location: region:1791543-1827606:1
so has part: feature:1791543-1792060:1:exon
so has part: feature:1821665-1821962:1:exon
so has part: feature:1824937-1825021:1:exon
so has part: feature:1826267-1827606:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1791543-1792060:1:exon

position:1792060:1
position: 1792060
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1821665-1821962:1:exon

position:1821665:1
position: 1821665
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1821962:1
position: 1821962
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1824937-1825021:1:exon

position:1824937:1
position: 1824937
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1825021:1
position: 1825021
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1826267-1827606:1:exon

position:1826267:1
position: 1826267
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

BARX2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8839
gene: BARX2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: homeobox protein BarH-like 2
translation: MHCQPQPRLAAPGRAKAGRRRYKTFMIDEILSKETCDYFEKLSLYSVCPSLLVRPKPLHSCAGSPSLRAYPLISVITRQPSVVPHLVPAATSSRVLPAQASSGTASSETPASETHASSESEAEQPTPRLKKPRRSRTIFTELQLMGLEKKFQKQKYLSTPDRLDLAQSLGLTQLQVKTWYQNRRMKWKKMVLKGGQEAPTKPKGRPKKNSIPTSEEIEAEEKMNSQAQSQELEGSQAPEEPKVTEEKPEGSSETEKSPEHIPAPSSEEATPLS
SIO_010081: BARX2
subclass of: SO_0000673
so part of: BARX2
location: join(1791874..1792060,1821665..1821962,1824937..1825021,1826267..1826518)
location: region:1791874-1826518:1
so has part: feature:1791874-1792060:1:exon
so has part: feature:1821665-1821962:1:exon
so has part: feature:1824937-1825021:1:exon
so has part: feature:1826267-1826518:1:exon

XP_027300110.1
type: Protein
SIO_000068: ncbiprotein

position:1791874:1
position: 1791874
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1826518:1
position: 1826518
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1791874-1792060:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1821665-1821962:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1824937-1825021:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1826267-1826518:1:exon

LOC110352740
type: Gene
subclass of: SO_0000704
RO_0002162: 8839
gene: LOC110352740
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1840387..1876613
location: region:1840387-1876613:1
so has part: feature:1840387-1876613:1:exon
subclass of: SO_0000011

110352740
type: Gene
SIO_000068: ncbigene

position:1840387:1
position: 1840387
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1876613:1
position: 1876613
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1840387-1876613:1:exon

LOC110352740
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 8839
nc RNA class: lncRNA
gene: LOC110352740
product: uncharacterized LOC110352740
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XR_005260942.1
SIO_010081: LOC110352740
subclass of: SO_0000673
so part of: LOC110352740
location: join(1840387..1840556,1843640..1843811,1853870..1853975,1872936..1873146,1873818..1876613)
location: region:1840387-1876613:1
so has part: feature:1840387-1840556:1:exon
so has part: feature:1843640-1843811:1:exon
so has part: feature:1853870-1853975:1:exon
so has part: feature:1872936-1873146:1:exon
so has part: feature:1873818-1876613:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1840387-1840556:1:exon

position:1840556:1
position: 1840556
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1843640-1843811:1:exon

position:1843640:1
position: 1843640
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1843811:1
position: 1843811
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1853870-1853975:1:exon

position:1853870:1
position: 1853870
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1853975:1
position: 1853975
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1872936-1873146:1:exon

position:1872936:1
position: 1872936
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1873146:1
position: 1873146
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1873818-1876613:1:exon

position:1873818:1
position: 1873818
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

TMEM45B
type: Gene
subclass of: SO_0000704
RO_0002162: 8839
gene: TMEM45B
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1884448..1895054
location: region:1884448-1895054:1
so has part: feature:1884448-1895054:1:exon
subclass of: SO_0000010

101794743
type: Gene
SIO_000068: ncbigene

position:1884448:1
position: 1884448
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1895054:1
position: 1895054
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1884448-1895054:1:exon

TMEM45B
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8839
gene: TMEM45B
product: transmembrane protein 45B
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 7 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 33 samples with support for all annotated introns
transcript id: XM_005019660.5
SIO_010081: TMEM45B
subclass of: SO_0000673
so part of: TMEM45B
location: join(1884448..1884571,1890969..1891170,1891537..1891749,1892616..1892800,1893665..1893810,1894354..1895054)
location: region:1884448-1895054:1
so has part: feature:1884448-1884571:1:exon
so has part: feature:1890969-1891170:1:exon
so has part: feature:1891537-1891749:1:exon
so has part: feature:1892616-1892800:1:exon
so has part: feature:1893665-1893810:1:exon
so has part: feature:1894354-1895054:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1884448-1884571:1:exon

position:1884571:1
position: 1884571
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1890969-1891170:1:exon