Anas platyrhynchos isolate Z2 breed Pekin duck chromosome 24, ZJU1.0, whole genome shotgun sequence.
type: Entry
definition: Anas platyrhynchos isolate Z2 breed Pekin duck chromosome 24, ZJU1.0, whole genome shotgun sequence.
sequence version: NC_051795.1
sequence date: 2020-12-15
sequence: sequence
division: CON
label: NC_051795.1
type: RefSeq
SIO_000068: refseq
dblink: PRJNA681492
dblink: SAMN15588841
keyword: WGS
keyword: RefSeq
source: Anas platyrhynchos (mallard)
organism: Anas platyrhynchos
taxonomy: Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Galloanserae; Anseriformes; Anatidae; Anatinae; Anas.
comment: REFSEQ INFORMATION: The reference sequence is identical to\nCM027266.1.\nAssembly name: ZJU1.0\nThe genomic sequence for this RefSeq record is from the\nwhole-genome assembly released by the Zhejiang University on\n2020/11/23. The original whole-genome shotgun project has the\naccession JACGAL000000000.1.\n\n##Genome-Assembly-Data-START##\nAssembly Provider :: Zhejiang University\nAssembly Method :: FALCON-Unzip v. git 12072017\nAssembly Name :: ZJU1.0\nGenome Representation :: Full\nExpected Final Version :: No\nGenome Coverage :: 143.0x\nSequencing Technology :: PacBio RSII; PacBio Sequel\n##Genome-Assembly-Data-END##\n\n##Genome-Annotation-Data-START##\nAnnotation Provider :: NCBI\nAnnotation Status :: Full annotation\nAnnotation Name :: Anas platyrhynchos Annotation\n Release 104\nAnnotation Version :: 104\nAnnotation Pipeline :: NCBI eukaryotic genome annotation\n pipeline\nAnnotation Software Version :: 8.5\nAnnotation Method :: Best-placed RefSeq; Gnomon\nFeatures Annotated :: Gene; mRNA; CDS; ncRNA\n##Genome-Annotation-Data-END##

sequence
subclass of: SO_0000340
sequence length: 7636233
topology: linear
so has quality: SO_0000987
location: 1..7636233
location: region:1-7636233:1
RO_0002162: 8839

NC_051795
type: RefSeq
SIO_000068: refseq

PRJNA681492
type: BioProject
SIO_000068: bioproject

SAMN15588841
type: BioSample
SIO_000068: biosample

position:1:1
position: 1
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7636233:1
position: 7636233
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

feature:1-7636233:1:source
so part of: sequence
organism: Anas platyrhynchos
mol type: genomic DNA
isolate: Z2
chromosome: 24
sex: pooled male and female
tissue type: multiple
dev stage: adult
breed: Pekin duck

8839
type: Taxonomy
SIO_000068: taxonomy

MTFR1L
type: Gene
subclass of: SO_0000704
RO_0002162: 8839
gene: MTFR1L
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(3840..13072)
location: region:3840-13072:-1
so has part: feature:3840-13072:-1:exon
subclass of: SO_0000010

101794267
type: Gene
SIO_000068: ncbigene

position:3840:-1
position: 3840
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:13072:-1
position: 13072
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3840-13072:-1:exon

MTFR1L
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8839
gene: MTFR1L
product: mitochondrial fission regulator 1 like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 124 samples with support for all annotated introns
transcript id: XM_027448660.2
SIO_010081: MTFR1L
subclass of: SO_0000673
so part of: MTFR1L
location: complement(join(3840..4876,6777..7089,8924..9135,10235..10344,11010..11114,12619..12745,12927..13072))
location: region:3840-13072:-1
so has part: feature:12927-13072:-1:exon
so has part: feature:12619-12745:-1:exon
so has part: feature:11010-11114:-1:exon
so has part: feature:10235-10344:-1:exon
so has part: feature:8924-9135:-1:exon
so has part: feature:6777-7089:-1:exon
so has part: feature:3840-4876:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:12927-13072:-1:exon

position:12927:-1
position: 12927
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:12619-12745:-1:exon

position:12619:-1
position: 12619
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:12745:-1
position: 12745
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:11010-11114:-1:exon

position:11010:-1
position: 11010
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:11114:-1
position: 11114
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:10235-10344:-1:exon

position:10235:-1
position: 10235
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:10344:-1
position: 10344
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:8924-9135:-1:exon

position:8924:-1
position: 8924
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:9135:-1
position: 9135
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:6777-7089:-1:exon

position:6777:-1
position: 6777
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7089:-1
position: 7089
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:3840-4876:-1:exon

position:4876:-1
position: 4876
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

MTFR1L
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8839
gene: MTFR1L
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: mitochondrial fission regulator 1-like
translation: MAADSTIPIWQNKPHGSTRSVVRRIGSNLPLKPCPRATFEVLPNVSELYLNDVPPVPTLADIGWIAADDEETYARVRSDTRPLKHKWKPSPFTVIQRNASVPNLRKQGEKLLALKKPGLPALSRTTELQDELSHLRSQIAKIVAAESASPSFTPDVLSPGSSNASSPLPCFGPSFQSTTSFVISDITEEEAELETPELPSVSMLCSATSECCKSEPKDPDEEDSVSLSKASSFADMMGILKDIHRMKQSKDLNRTSVKEEDPAVLIAEVLRRKFALKDEDLTMKEK
SIO_010081: MTFR1L
subclass of: SO_0000673
so part of: MTFR1L
location: complement(join(4771..4876,6777..7089,8924..9135,10235..10344,11010..11114,12619..12633))
location: region:4771-12633:-1
so has part: feature:12619-12633:-1:exon
so has part: feature:11010-11114:-1:exon
so has part: feature:10235-10344:-1:exon
so has part: feature:8924-9135:-1:exon
so has part: feature:6777-7089:-1:exon
so has part: feature:4771-4876:-1:exon

XP_027304461.1
type: Protein
SIO_000068: ncbiprotein

position:4771:-1
position: 4771
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:12633:-1
position: 12633
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:12619-12633:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:11010-11114:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:10235-10344:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:8924-9135:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:6777-7089:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:4771-4876:-1:exon

SELENON
type: Gene
subclass of: SO_0000704
RO_0002162: 8839
gene: SELENON
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(13093..31144)
location: region:13093-31144:-1
so has part: feature:13093-31144:-1:exon
subclass of: SO_0000010

101794449
type: Gene
SIO_000068: ncbigene

position:13093:-1
position: 13093
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:31144:-1
position: 31144
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:13093-31144:-1:exon

SELENON
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8839
gene: SELENON
product: selenoprotein N, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 97 samples with support for all annotated introns
transcript id: XM_038167158.1
SIO_010081: SELENON
subclass of: SO_0000673
so part of: SELENON
location: complement(join(13093..16398,17592..17693,18368..18480,19311..19416,20692..20880,21834..21915,22636..22773,23581..23705,25278..25408,26212..26329,30958..31144))
location: region:13093-31144:-1
so has part: feature:30958-31144:-1:exon
so has part: feature:26212-26329:-1:exon
so has part: feature:25278-25408:-1:exon
so has part: feature:23581-23705:-1:exon
so has part: feature:22636-22773:-1:exon
so has part: feature:21834-21915:-1:exon
so has part: feature:20692-20880:-1:exon
so has part: feature:19311-19416:-1:exon
so has part: feature:18368-18480:-1:exon
so has part: feature:17592-17693:-1:exon
so has part: feature:13093-16398:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:30958-31144:-1:exon

position:30958:-1
position: 30958
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:26212-26329:-1:exon

position:26212:-1
position: 26212
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:26329:-1
position: 26329
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:25278-25408:-1:exon

position:25278:-1
position: 25278
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:25408:-1
position: 25408
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:23581-23705:-1:exon

position:23581:-1
position: 23581
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:23705:-1
position: 23705
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:22636-22773:-1:exon

position:22636:-1
position: 22636
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:22773:-1
position: 22773
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:21834-21915:-1:exon

position:21834:-1
position: 21834
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:21915:-1
position: 21915
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:20692-20880:-1:exon

position:20692:-1
position: 20692
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:20880:-1
position: 20880
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:19311-19416:-1:exon

position:19311:-1
position: 19311
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:19416:-1
position: 19416
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:18368-18480:-1:exon

position:18368:-1
position: 18368
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:18480:-1
position: 18480
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:17592-17693:-1:exon

position:17592:-1
position: 17592
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:17693:-1
position: 17693
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:13093-16398:-1:exon

position:16398:-1
position: 16398
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

SELENON
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8839
gene: SELENON
product: selenoprotein N, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 124 samples with support for all annotated introns
transcript id: XM_038167157.1
SIO_010081: SELENON
subclass of: SO_0000673
so part of: SELENON
location: complement(join(13093..16398,17592..17693,18368..18480,19311..19416,20692..20880,21834..21915,22636..22773,23581..23705,24593..24805,25320..25408,26212..26329,30958..31143))
location: region:13093-31143:-1
so has part: feature:30958-31143:-1:exon
so has part: feature:26212-26329:-1:exon
so has part: feature:25320-25408:-1:exon
so has part: feature:24593-24805:-1:exon
so has part: feature:23581-23705:-1:exon
so has part: feature:22636-22773:-1:exon
so has part: feature:21834-21915:-1:exon
so has part: feature:20692-20880:-1:exon
so has part: feature:19311-19416:-1:exon
so has part: feature:18368-18480:-1:exon
so has part: feature:17592-17693:-1:exon
so has part: feature:13093-16398:-1:exon

position:31143:-1
position: 31143
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:30958-31143:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:26212-26329:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:25320-25408:-1:exon

position:25320:-1
position: 25320
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:24593-24805:-1:exon

position:24593:-1
position: 24593
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:24805:-1
position: 24805
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:23581-23705:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:22636-22773:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:21834-21915:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:20692-20880:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:19311-19416:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:18368-18480:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:17592-17693:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:13093-16398:-1:exon

SELENON
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8839
gene: SELENON
product: selenoprotein N, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 126 samples with support for all annotated introns
transcript id: XM_038167156.1
SIO_010081: SELENON
subclass of: SO_0000673
so part of: SELENON
location: complement(join(13093..16398,17592..17693,18368..18480,19311..19416,20692..20880,21834..21915,22636..22773,23581..23705,24593..24805,25278..25408,26212..26329,30958..31141))
location: region:13093-31141:-1
so has part: feature:30958-31141:-1:exon
so has part: feature:26212-26329:-1:exon
so has part: feature:25278-25408:-1:exon
so has part: feature:24593-24805:-1:exon
so has part: feature:23581-23705:-1:exon
so has part: feature:22636-22773:-1:exon
so has part: feature:21834-21915:-1:exon
so has part: feature:20692-20880:-1:exon
so has part: feature:19311-19416:-1:exon
so has part: feature:18368-18480:-1:exon
so has part: feature:17592-17693:-1:exon
so has part: feature:13093-16398:-1:exon

position:31141:-1
position: 31141
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:30958-31141:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:26212-26329:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:25278-25408:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:24593-24805:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:23581-23705:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:22636-22773:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:21834-21915:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:20692-20880:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:19311-19416:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:18368-18480:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:17592-17693:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:13093-16398:-1:exon

SELENON
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8839
gene: SELENON
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
transl except: (pos:complement(19312..19314),aa:Sec)
product: selenoprotein N isoform X2
translation: MAGPGAVSSRLALALAALAALAAVKYYRDAEAARQQELALKSLGSEGLFLFSSLDTNNDLYLSPEEFKPIAEKLTGVTPVSEFEEEETPDPTGETLSIVAKFQPLISHVALSGLRNWTAPAAHKSVMLAKHFKAFLPPKNKVDLGDPWWIIPSELNIFTGYLSNNRFYPPPPKGKEITIHRLLSMFHPRPFVKTRFAPQGSVACIQAISTFYYAIAFRIHAEFQLNEPPDFPFWFSPGQFTGHIILSKDSSHVREFKLFVPNNRSLNVDMEWLYGASESSNMEVDIGYLPQMELESTGPSVPSVIYDENGNVIDSRDPSGEPIQFVFEEITWQQEIPWEEAAQKLEVAMYPFKKVSYFPFTQAFERAKAEKKLVHSILLWGALDDQSCUGSGRTLRETVLESSPILALLNESFISSWSLVKELEELQTNRENEFYSKLADLHLEKYNFPVEMIICLPNGTVIHHINANYFLDITSMKPEDVESSIFSFSNNFDDPSTATYLQFLKEGLQRAKSYLQT
SIO_010081: SELENON
subclass of: SO_0000673
so part of: SELENON
location: complement(join(16228..16398,17592..17693,18368..18480,19311..19416,20692..20880,21834..21915,22636..22773,23581..23705,24593..24805,25320..25408,26212..26329,30958..31065))
location: region:16228-31065:-1
so has part: feature:30958-31065:-1:exon
so has part: feature:26212-26329:-1:exon
so has part: feature:25320-25408:-1:exon
so has part: feature:24593-24805:-1:exon
so has part: feature:23581-23705:-1:exon
so has part: feature:22636-22773:-1:exon
so has part: feature:21834-21915:-1:exon
so has part: feature:20692-20880:-1:exon
so has part: feature:19311-19416:-1:exon
so has part: feature:18368-18480:-1:exon
so has part: feature:17592-17693:-1:exon
so has part: feature:16228-16398:-1:exon

XP_038023085.1
type: Protein
SIO_000068: ncbiprotein

position:16228:-1
position: 16228
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:31065:-1
position: 31065
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:30958-31065:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:26212-26329:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:25320-25408:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:24593-24805:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:23581-23705:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:22636-22773:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:21834-21915:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:20692-20880:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:19311-19416:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:18368-18480:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:17592-17693:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:16228-16398:-1:exon

SELENON
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8839
gene: SELENON
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
transl except: (pos:complement(19312..19314),aa:Sec)
product: selenoprotein N isoform X3
translation: MAGPGAVSSRLALALAALAALAAVKYYRDAEAARQQELALKSLGSEGLFLFSSLDTNNDLYLSPEEFKPIAEKLTGVTPVSEFEEEETPDPTGETLSIVAKFQPLVMETMTKSKDGFLGITIHRLLSMFHPRPFVKTRFAPQGSVACIQAISTFYYAIAFRIHAEFQLNEPPDFPFWFSPGQFTGHIILSKDSSHVREFKLFVPNNRSLNVDMEWLYGASESSNMEVDIGYLPQMELESTGPSVPSVIYDENGNVIDSRDPSGEPIQFVFEEITWQQEIPWEEAAQKLEVAMYPFKKVSYFPFTQAFERAKAEKKLVHSILLWGALDDQSCUGSGRTLRETVLESSPILALLNESFISSWSLVKELEELQTNRENEFYSKLADLHLEKYNFPVEMIICLPNGTVIHHINANYFLDITSMKPEDVESSIFSFSNNFDDPSTATYLQFLKEGLQRAKSYLQT
SIO_010081: SELENON
subclass of: SO_0000673
so part of: SELENON
location: complement(join(16228..16398,17592..17693,18368..18480,19311..19416,20692..20880,21834..21915,22636..22773,23581..23705,25278..25408,26212..26329,30958..31065))
location: region:16228-31065:-1
so has part: feature:30958-31065:-1:exon
so has part: feature:26212-26329:-1:exon
so has part: feature:25278-25408:-1:exon
so has part: feature:23581-23705:-1:exon
so has part: feature:22636-22773:-1:exon
so has part: feature:21834-21915:-1:exon
so has part: feature:20692-20880:-1:exon
so has part: feature:19311-19416:-1:exon
so has part: feature:18368-18480:-1:exon
so has part: feature:17592-17693:-1:exon
so has part: feature:16228-16398:-1:exon

XP_038023086.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:30958-31065:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:26212-26329:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:25278-25408:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:23581-23705:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:22636-22773:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:21834-21915:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:20692-20880:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:19311-19416:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:18368-18480:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:17592-17693:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:16228-16398:-1:exon

SELENON
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8839
gene: SELENON
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
transl except: (pos:complement(19312..19314),aa:Sec)
product: selenoprotein N isoform X1
translation: MAGPGAVSSRLALALAALAALAAVKYYRDAEAARQQELALKSLGSEGLFLFSSLDTNNDLYLSPEEFKPIAEKLTGVTPVSEFEEEETPDPTGETLSIVAKFQPLVMETMTKSKDGFLGISHVALSGLRNWTAPAAHKSVMLAKHFKAFLPPKNKVDLGDPWWIIPSELNIFTGYLSNNRFYPPPPKGKEITIHRLLSMFHPRPFVKTRFAPQGSVACIQAISTFYYAIAFRIHAEFQLNEPPDFPFWFSPGQFTGHIILSKDSSHVREFKLFVPNNRSLNVDMEWLYGASESSNMEVDIGYLPQMELESTGPSVPSVIYDENGNVIDSRDPSGEPIQFVFEEITWQQEIPWEEAAQKLEVAMYPFKKVSYFPFTQAFERAKAEKKLVHSILLWGALDDQSCUGSGRTLRETVLESSPILALLNESFISSWSLVKELEELQTNRENEFYSKLADLHLEKYNFPVEMIICLPNGTVIHHINANYFLDITSMKPEDVESSIFSFSNNFDDPSTATYLQFLKEGLQRAKSYLQT
SIO_010081: SELENON
subclass of: SO_0000673
so part of: SELENON
location: complement(join(16228..16398,17592..17693,18368..18480,19311..19416,20692..20880,21834..21915,22636..22773,23581..23705,24593..24805,25278..25408,26212..26329,30958..31065))
location: region:16228-31065:-1
so has part: feature:30958-31065:-1:exon
so has part: feature:26212-26329:-1:exon
so has part: feature:25278-25408:-1:exon
so has part: feature:24593-24805:-1:exon
so has part: feature:23581-23705:-1:exon
so has part: feature:22636-22773:-1:exon
so has part: feature:21834-21915:-1:exon
so has part: feature:20692-20880:-1:exon
so has part: feature:19311-19416:-1:exon
so has part: feature:18368-18480:-1:exon
so has part: feature:17592-17693:-1:exon
so has part: feature:16228-16398:-1:exon

XP_038023084.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:30958-31065:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:26212-26329:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:25278-25408:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:24593-24805:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:23581-23705:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:22636-22773:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:21834-21915:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:20692-20880:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:19311-19416:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:18368-18480:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:17592-17693:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:16228-16398:-1:exon

LOC119713580
type: Gene
subclass of: SO_0000704
RO_0002162: 8839
gene: LOC119713580
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 30238..33313
location: region:30238-33313:1
so has part: feature:30238-33313:1:exon
subclass of: SO_0000011

119713580
type: Gene
SIO_000068: ncbigene

position:30238:1
position: 30238
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:33313:1
position: 33313
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:30238-33313:1:exon

LOC119713580
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 8839
nc RNA class: lncRNA
gene: LOC119713580
product: uncharacterized LOC119713580
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 16 samples with support for all annotated introns
transcript id: XR_005260778.1
SIO_010081: LOC119713580
subclass of: SO_0000673
so part of: LOC119713580
location: join(30238..30676,32126..33313)
location: region:30238-33313:1
so has part: feature:30238-30676:1:exon
so has part: feature:32126-33313:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:30238-30676:1:exon

position:30676:1
position: 30676
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:32126-33313:1:exon

position:32126:1
position: 32126
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

MAN1C1
type: Gene
subclass of: SO_0000704
RO_0002162: 8839
gene: MAN1C1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(32814..77085)
location: region:32814-77085:-1
so has part: feature:32814-77085:-1:exon
subclass of: SO_0000010

119713574
type: Gene
SIO_000068: ncbigene

position:32814:-1
position: 32814
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:77085:-1
position: 77085
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:32814-77085:-1:exon

MAN1C1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8839
gene: MAN1C1
product: mannosidase alpha class 1C member 1, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 124 samples with support for all annotated introns
transcript id: XM_038167155.1
SIO_010081: MAN1C1
subclass of: SO_0000673
so part of: MAN1C1
location: complement(join(32814..33621,34260..34375,35202..35374,38207..38426,38574..38689,42277..42370,44815..44938,49212..49306,51524..51604,54058..54173,68190..68286,75033..76039,76770..77085))
location: region:32814-77085:-1
so has part: feature:76770-77085:-1:exon
so has part: feature:75033-76039:-1:exon
so has part: feature:68190-68286:-1:exon
so has part: feature:54058-54173:-1:exon
so has part: feature:51524-51604:-1:exon
so has part: feature:49212-49306:-1:exon
so has part: feature:44815-44938:-1:exon
so has part: feature:42277-42370:-1:exon
so has part: feature:38574-38689:-1:exon
so has part: feature:38207-38426:-1:exon
so has part: feature:35202-35374:-1:exon
so has part: feature:34260-34375:-1:exon
so has part: feature:32814-33621:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:76770-77085:-1:exon

position:76770:-1
position: 76770
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:75033-76039:-1:exon

position:75033:-1
position: 75033
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:76039:-1
position: 76039
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:68190-68286:-1:exon

position:68190:-1
position: 68190
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:68286:-1
position: 68286
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:54058-54173:-1:exon

position:54058:-1
position: 54058
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:54173:-1
position: 54173
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:51524-51604:-1:exon

position:51524:-1
position: 51524
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:51604:-1
position: 51604
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:49212-49306:-1:exon

position:49212:-1
position: 49212
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:49306:-1
position: 49306
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:44815-44938:-1:exon

position:44815:-1
position: 44815
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:44938:-1
position: 44938
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:42277-42370:-1:exon

position:42277:-1
position: 42277
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:42370:-1
position: 42370
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:38574-38689:-1:exon

position:38574:-1
position: 38574
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:38689:-1
position: 38689
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:38207-38426:-1:exon

position:38207:-1
position: 38207
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:38426:-1
position: 38426
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:35202-35374:-1:exon

position:35202:-1
position: 35202
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:35374:-1
position: 35374
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:34260-34375:-1:exon

position:34260:-1
position: 34260
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:34375:-1
position: 34375
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:32814-33621:-1:exon

position:33621:-1
position: 33621
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

MAN1C1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8839
gene: MAN1C1
product: mannosidase alpha class 1C member 1, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 72 samples with support for all annotated introns
transcript id: XM_038167154.1
SIO_010081: MAN1C1
subclass of: SO_0000673
so part of: MAN1C1
location: complement(join(32814..33621,34260..34375,35202..35374,37994..38056,38207..38426,38574..38689,42277..42370,44815..44938,49212..49306,51524..51604,54058..54173,68190..68286,75033..76039,76770..76908))
location: region:32814-76908:-1
so has part: feature:76770-76908:-1:exon
so has part: feature:75033-76039:-1:exon
so has part: feature:68190-68286:-1:exon
so has part: feature:54058-54173:-1:exon
so has part: feature:51524-51604:-1:exon
so has part: feature:49212-49306:-1:exon
so has part: feature:44815-44938:-1:exon
so has part: feature:42277-42370:-1:exon
so has part: feature:38574-38689:-1:exon
so has part: feature:38207-38426:-1:exon
so has part: feature:37994-38056:-1:exon
so has part: feature:35202-35374:-1:exon
so has part: feature:34260-34375:-1:exon
so has part: feature:32814-33621:-1:exon

position:76908:-1
position: 76908
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:76770-76908:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:75033-76039:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:68190-68286:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:54058-54173:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:51524-51604:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:49212-49306:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:44815-44938:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:42277-42370:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:38574-38689:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:38207-38426:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:37994-38056:-1:exon

position:37994:-1
position: 37994
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:38056:-1
position: 38056
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:35202-35374:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:34260-34375:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:32814-33621:-1:exon

MAN1C1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8839
gene: MAN1C1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: mannosyl-oligosaccharide 1,2-alpha-mannosidase IC isoform X2
translation: MVPPRKPPGMPGWPAALGLRLPQKFLFLLFLSGLLTLCFGALFLLPDSSRFKRLFLPRRAAAAAASSSSSSSASSARDAALPRGPPAAAEPRHASPAAPRRLREQLRAAGPPAHTAAAAASRQQVRGDGRRRELDTGAPPAARETRAPSRFDYERFRRSLRHPVRGGRPGEDPDARARRMKIKEMMKFAWDSYKQYAFGKNELRPLTKNGHIGNMFGGLRGATVVDALDTLYIMELEEEFQEAKKWVEKSFDLNVNGEASLFEVNIRYIGGLLAAYYLTGEEVFKSKALELGEKLLPAFNTPTGIPRGVINLGSGMSWSWGWASAGSSILAEFGTLHLEFLHLTELSGNPVFAEKVMNIRKVLNRVEKPQGLYPNFLSPVTGNWVQHHVSIGGLGDSFYEYLIKSWLMSDKKDSEAKKMYDDALEAIEKHLVRRSAGGLTYIAEWRGGILDHKMGHLACFSGGMIALGAEHASEERKQHYMDLAAEITNTCHESYARSDTKLGPEAFRFDTGTEAMATRLSERYYILRPEVVESYMYMWRLTHDLKYRQWGWEVVKALEKHCRVEAGFSGIRDVYTTVPTHDNMQQSFFLAETLKYLYLLFCEDDVLSLDDWVFNTEAHPLPVNHTNFKTKASVQ
SIO_010081: MAN1C1
subclass of: SO_0000673
so part of: MAN1C1
location: complement(join(33498..33621,34260..34375,35202..35374,38207..38426,38574..38689,42277..42370,44815..44938,49212..49306,51524..51604,54058..54173,68190..68286,75033..75584))
location: region:33498-75584:-1
so has part: feature:75033-75584:-1:exon
so has part: feature:68190-68286:-1:exon
so has part: feature:54058-54173:-1:exon
so has part: feature:51524-51604:-1:exon
so has part: feature:49212-49306:-1:exon
so has part: feature:44815-44938:-1:exon
so has part: feature:42277-42370:-1:exon
so has part: feature:38574-38689:-1:exon
so has part: feature:38207-38426:-1:exon
so has part: feature:35202-35374:-1:exon
so has part: feature:34260-34375:-1:exon
so has part: feature:33498-33621:-1:exon

XP_038023083.1
type: Protein
SIO_000068: ncbiprotein

position:33498:-1
position: 33498
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:75584:-1
position: 75584
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:75033-75584:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:68190-68286:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:54058-54173:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:51524-51604:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:49212-49306:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:44815-44938:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:42277-42370:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:38574-38689:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:38207-38426:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:35202-35374:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:34260-34375:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:33498-33621:-1:exon

MAN1C1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8839
gene: MAN1C1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: mannosyl-oligosaccharide 1,2-alpha-mannosidase IC isoform X1
translation: MVPPRKPPGMPGWPAALGLRLPQKFLFLLFLSGLLTLCFGALFLLPDSSRFKRLFLPRRAAAAAASSSSSSSASSARDAALPRGPPAAAEPRHASPAAPRRLREQLRAAGPPAHTAAAAASRQQVRGDGRRRELDTGAPPAARETRAPSRFDYERFRRSLRHPVRGGRPGEDPDARARRMKIKEMMKFAWDSYKQYAFGKNELRPLTKNGHIGNMFGGLRGATVVDALDTLYIMELEEEFQEAKKWVEKSFDLNVNGEASLFEVNIRYIGGLLAAYYLTGEEVFKSKALELGEKLLPAFNTPTGIPRGVINLGSGMSWSWGWASAGSSILAEFGTLHLEFLHLTELSGNPVFAEKVMNIRKVLNRVEKPQGLYPNFLSPVTGNWVQHHVSIGGLGDSFYEYLIKSWLMSDKKDSEAKKMYDDALEAIEKHLVRRSAGGLTYIAEWRGGILDHKMGHLACFSGGMIALGAEHASEERKQHYMDLAAEITNTCHESYARSGYLKEGSMFYMADSWSSGTDRYTKLGPEAFRFDTGTEAMATRLSERYYILRPEVVESYMYMWRLTHDLKYRQWGWEVVKALEKHCRVEAGFSGIRDVYTTVPTHDNMQQSFFLAETLKYLYLLFCEDDVLSLDDWVFNTEAHPLPVNHTNFKTKASVQ
SIO_010081: MAN1C1
subclass of: SO_0000673
so part of: MAN1C1
location: complement(join(33498..33621,34260..34375,35202..35374,37994..38056,38207..38426,38574..38689,42277..42370,44815..44938,49212..49306,51524..51604,54058..54173,68190..68286,75033..75584))
location: region:33498-75584:-1
so has part: feature:75033-75584:-1:exon
so has part: feature:68190-68286:-1:exon
so has part: feature:54058-54173:-1:exon
so has part: feature:51524-51604:-1:exon
so has part: feature:49212-49306:-1:exon
so has part: feature:44815-44938:-1:exon
so has part: feature:42277-42370:-1:exon
so has part: feature:38574-38689:-1:exon
so has part: feature:38207-38426:-1:exon
so has part: feature:37994-38056:-1:exon
so has part: feature:35202-35374:-1:exon
so has part: feature:34260-34375:-1:exon
so has part: feature:33498-33621:-1:exon

XP_038023082.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:75033-75584:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:68190-68286:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:54058-54173:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:51524-51604:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:49212-49306:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:44815-44938:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:42277-42370:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:38574-38689:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:38207-38426:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:37994-38056:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:35202-35374:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:34260-34375:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:33498-33621:-1:exon

LDLRAP1
type: Gene
subclass of: SO_0000704
RO_0002162: 8839
gene: LDLRAP1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(79032..100538)
location: region:79032-100538:-1
so has part: feature:79032-100538:-1:exon
subclass of: SO_0000010

119713577
type: Gene
SIO_000068: ncbigene

position:79032:-1
position: 79032
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:100538:-1
position: 100538
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:79032-100538:-1:exon

LDLRAP1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8839
gene: LDLRAP1
product: low density lipoprotein receptor adaptor protein 1, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 7 samples with support for all annotated introns
transcript id: XM_038167167.1
SIO_010081: LDLRAP1
subclass of: SO_0000673
so part of: LDLRAP1
location: complement(join(79032..81074,84314..84444,85789..85872,86444..86516,89592..89706,92463..92575,93448..93590,98450..98555,100351..100538))
location: region:79032-100538:-1
so has part: feature:100351-100538:-1:exon
so has part: feature:98450-98555:-1:exon
so has part: feature:93448-93590:-1:exon
so has part: feature:92463-92575:-1:exon
so has part: feature:89592-89706:-1:exon
so has part: feature:86444-86516:-1:exon
so has part: feature:85789-85872:-1:exon
so has part: feature:84314-84444:-1:exon
so has part: feature:79032-81074:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:100351-100538:-1:exon

position:100351:-1
position: 100351
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:98450-98555:-1:exon

position:98450:-1
position: 98450
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:98555:-1
position: 98555
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:93448-93590:-1:exon

position:93448:-1
position: 93448
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:93590:-1
position: 93590
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:92463-92575:-1:exon

position:92463:-1
position: 92463
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:92575:-1
position: 92575
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:89592-89706:-1:exon

position:89592:-1
position: 89592
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:89706:-1
position: 89706
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:86444-86516:-1:exon

position:86444:-1
position: 86444
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:86516:-1
position: 86516
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:85789-85872:-1:exon

position:85789:-1
position: 85789
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:85872:-1
position: 85872
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:84314-84444:-1:exon

position:84314:-1
position: 84314
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:84444:-1
position: 84444
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:79032-81074:-1:exon

position:81074:-1
position: 81074
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LDLRAP1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8839
gene: LDLRAP1
product: low density lipoprotein receptor adaptor protein 1, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 7 samples with support for all annotated introns
transcript id: XM_038167165.1
SIO_010081: LDLRAP1
subclass of: SO_0000673
so part of: LDLRAP1
location: complement(join(79032..81074,82892..82926,84314..84444,85789..85872,86444..86516,89592..89706,92463..92575,93448..93590,98450..98555,100351..100437))
location: region:79032-100437:-1
so has part: feature:100351-100437:-1:exon
so has part: feature:98450-98555:-1:exon
so has part: feature:93448-93590:-1:exon
so has part: feature:92463-92575:-1:exon
so has part: feature:89592-89706:-1:exon
so has part: feature:86444-86516:-1:exon
so has part: feature:85789-85872:-1:exon
so has part: feature:84314-84444:-1:exon
so has part: feature:82892-82926:-1:exon
so has part: feature:79032-81074:-1:exon

position:100437:-1
position: 100437
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:100351-100437:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:98450-98555:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:93448-93590:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:92463-92575:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:89592-89706:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:86444-86516:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:85789-85872:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:84314-84444:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:82892-82926:-1:exon

position:82892:-1
position: 82892
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:82926:-1
position: 82926
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:79032-81074:-1:exon

LDLRAP1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8839
gene: LDLRAP1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: low density lipoprotein receptor adapter protein 1 isoform X1
translation: MRSMYRSSGDIQLQGAISARKENLDWRAAVTPLWAFTLWLRWHLEEIPSAAPSRASAAGRATELPENWTDTRETLLEGVLFSLKYLGMTLVEQPKGEELSAAAVKRIVATAKASGKKLQKVTLKVSPRGIVLNDSGTNELIENISIYRISYCTADKIHDKVFAYIAQNQLNENLECHAFLCTKRKMAQAVTLTVAQAFKIAFEFWQASKEEKEKRERSVLEGEGLSSPNLDAHACPDTPAVTANLLDLEDPAKLTLSGSANSAHLDNSMFGPSSSVNNNMMWEMDDGLDEAFSRLAQSRTNPHVLDTGLTAQDIQSAEMLSPVDWDKIDSNTGEKDDVFMF
SIO_010081: LDLRAP1
subclass of: SO_0000673
so part of: LDLRAP1
location: complement(join(80930..81074,82892..82926,84314..84444,85789..85872,86444..86516,89592..89706,92463..92575,93448..93590,98450..98555,100351..100431))
location: region:80930-100431:-1
so has part: feature:100351-100431:-1:exon
so has part: feature:98450-98555:-1:exon
so has part: feature:93448-93590:-1:exon
so has part: feature:92463-92575:-1:exon
so has part: feature:89592-89706:-1:exon
so has part: feature:86444-86516:-1:exon
so has part: feature:85789-85872:-1:exon
so has part: feature:84314-84444:-1:exon
so has part: feature:82892-82926:-1:exon
so has part: feature:80930-81074:-1:exon

XP_038023093.1
type: Protein
SIO_000068: ncbiprotein

position:80930:-1
position: 80930
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:100431:-1
position: 100431
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:100351-100431:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:98450-98555:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:93448-93590:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:92463-92575:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:89592-89706:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:86444-86516:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:85789-85872:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:84314-84444:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:82892-82926:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:80930-81074:-1:exon

LDLRAP1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8839
gene: LDLRAP1
product: low density lipoprotein receptor adaptor protein 1, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 12 Proteins, and 94% coverage of the annotated genomic feature by RNAseq alignments, including 126 samples with support for all annotated introns
transcript id: XM_038167166.1
SIO_010081: LDLRAP1
subclass of: SO_0000673
so part of: LDLRAP1
location: complement(join(80930..81074,82892..82926,84314..84444,85789..85872,86444..86516,89592..89706,92463..92575,93448..93590,97667..97751))
location: region:80930-97751:-1
so has part: feature:97667-97751:-1:exon
so has part: feature:93448-93590:-1:exon
so has part: feature:92463-92575:-1:exon
so has part: feature:89592-89706:-1:exon
so has part: feature:86444-86516:-1:exon
so has part: feature:85789-85872:-1:exon
so has part: feature:84314-84444:-1:exon
so has part: feature:82892-82926:-1:exon
so has part: feature:80930-81074:-1:exon

position:97751:-1
position: 97751
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:97667-97751:-1:exon

position:97667:-1
position: 97667
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:93448-93590:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:92463-92575:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:89592-89706:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:86444-86516:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:85789-85872:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:84314-84444:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:82892-82926:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:80930-81074:-1:exon

LDLRAP1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8839
gene: LDLRAP1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: low density lipoprotein receptor adapter protein 1 isoform X2
translation: MDALRSAGRALLRSPSVAKPAWAGGRHKKLPENWTDTRETLLEGVLFSLKYLGMTLVEQPKGEELSAAAVKRIVATAKASGKKLQKVTLKVSPRGIVLNDSGTNELIENISIYRISYCTADKIHDKVFAYIAQNQLNENLECHAFLCTKRKMAQAVTLTVAQAFKIAFEFWQASKEEKEKRERSVLEGEGLSSPNLDAHACPDTPAVTANLLDLEDPAKLTLSGSANSAHLDNSMFGPSSSVNNNMMWEMDDGLDEAFSRLAQSRTNPHVLDTGLTAQDIQSAEMLSPVDWDKIDSNTGEKDDVFMF
SIO_010081: LDLRAP1
subclass of: SO_0000673
so part of: LDLRAP1
location: complement(join(80930..81074,82892..82926,84314..84444,85789..85872,86444..86516,89592..89706,92463..92575,93448..93590,97667..97751))
location: region:80930-97751:-1
so has part: feature:97667-97751:-1:exon
so has part: feature:93448-93590:-1:exon
so has part: feature:92463-92575:-1:exon
so has part: feature:89592-89706:-1:exon
so has part: feature:86444-86516:-1:exon
so has part: feature:85789-85872:-1:exon
so has part: feature:84314-84444:-1:exon
so has part: feature:82892-82926:-1:exon
so has part: feature:80930-81074:-1:exon

XP_038023094.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:97667-97751:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:93448-93590:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:92463-92575:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:89592-89706:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:86444-86516:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:85789-85872:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:84314-84444:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:82892-82926:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:80930-81074:-1:exon

LDLRAP1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8839
gene: LDLRAP1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: low density lipoprotein receptor adapter protein 1 isoform X3
translation: MRSMYRSSGDIQLQGAISARKENLDWRAAVTPLWAFTLWLRWHLEEIPSAAPSRASAAGRATELPENWTDTRETLLEGVLFSLKYLGMTLVEQPKGEELSAAAVKRIVATAKASGKKLQKVTLKVSPRGIVLNDSGTNELIENISIYRISYCTADKIHDKVFAYIAQNQLNENLECHAFLCTKRKMAQAVTLTVAQAFKIAFEFWQASKEEKEKRERSVLEGEGLSSPNLDAHACPDTPAVTANLLDLEDPAKLTLSGSANSAHLDNSMFGPSSSVNNNMMWTCSVENKPSRS
SIO_010081: LDLRAP1
subclass of: SO_0000673
so part of: LDLRAP1
location: complement(join(81039..81074,84314..84444,85789..85872,86444..86516,89592..89706,92463..92575,93448..93590,98450..98555,100351..100431))
location: region:81039-100431:-1
so has part: feature:100351-100431:-1:exon
so has part: feature:98450-98555:-1:exon
so has part: feature:93448-93590:-1:exon
so has part: feature:92463-92575:-1:exon
so has part: feature:89592-89706:-1:exon
so has part: feature:86444-86516:-1:exon
so has part: feature:85789-85872:-1:exon
so has part: feature:84314-84444:-1:exon
so has part: feature:81039-81074:-1:exon

XP_038023095.1
type: Protein
SIO_000068: ncbiprotein

position:81039:-1
position: 81039
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:100351-100431:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:98450-98555:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:93448-93590:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:92463-92575:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:89592-89706:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:86444-86516:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:85789-85872:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:84314-84444:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:81039-81074:-1:exon

MACO1
type: Gene
subclass of: SO_0000704
RO_0002162: 8839
gene: MACO1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(102210..129602)
location: region:102210-129602:-1
so has part: feature:102210-129602:-1:exon
subclass of: SO_0000010

119713573
type: Gene
SIO_000068: ncbigene

position:102210:-1
position: 102210
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:129602:-1
position: 129602
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:102210-129602:-1:exon

MACO1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8839
gene: MACO1
product: macoilin 1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 7 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 126 samples with support for all annotated introns
transcript id: XM_038167153.1
SIO_010081: MACO1
subclass of: SO_0000673
so part of: MACO1
location: complement(join(102210..103418,104529..104703,105663..105783,106574..106756,106952..107110,114264..114759,115250..115428,117607..117730,119729..119855,120549..120690,129283..129602))
location: region:102210-129602:-1
so has part: feature:129283-129602:-1:exon
so has part: feature:120549-120690:-1:exon
so has part: feature:119729-119855:-1:exon
so has part: feature:117607-117730:-1:exon
so has part: feature:115250-115428:-1:exon
so has part: feature:114264-114759:-1:exon
so has part: feature:106952-107110:-1:exon
so has part: feature:106574-106756:-1:exon
so has part: feature:105663-105783:-1:exon
so has part: feature:104529-104703:-1:exon
so has part: feature:102210-103418:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:129283-129602:-1:exon

position:129283:-1
position: 129283
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:120549-120690:-1:exon

position:120549:-1
position: 120549
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:120690:-1
position: 120690
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:119729-119855:-1:exon

position:119729:-1
position: 119729
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:119855:-1
position: 119855
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:117607-117730:-1:exon

position:117607:-1
position: 117607
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:117730:-1
position: 117730
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:115250-115428:-1:exon

position:115250:-1
position: 115250
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:115428:-1
position: 115428
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:114264-114759:-1:exon

position:114264:-1
position: 114264
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:114759:-1
position: 114759
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:106952-107110:-1:exon

position:106952:-1
position: 106952
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:107110:-1
position: 107110
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:106574-106756:-1:exon

position:106574:-1
position: 106574
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:106756:-1
position: 106756
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:105663-105783:-1:exon

position:105663:-1
position: 105663
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:105783:-1
position: 105783
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:104529-104703:-1:exon

position:104529:-1
position: 104529
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:104703:-1
position: 104703
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:102210-103418:-1:exon

position:103418:-1
position: 103418
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

MACO1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8839
gene: MACO1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: macoilin
translation: MKRRSAECSKLRRPLKRNRIAEGIYGSTFLYLKFLVVWALVLLADFVLEFRFEYLWPFWLFIRSVYDSFRYQGLAFSVFFVCVAFTSNIICLLFIPIQWLFFAASTYVWVQYVWHTERGVCLPTVSLWILFVYIEAAIRFKDLKNFHVDLCRPFAAHCIGYPVVTLGFGFKSYVSYKMRLRKQKEVQKENEFYMQLLQQALPPEQQMLQRQEREAEEAKGLSEMDSSILLQHNGGIPTNKKVSATLPELEYREKGKEKDKDAKKHNLGINNNILQPVDSKIQEIEYMENHINSKRLNNDLVGSTENLLKEDSCTASSKNYKNVSGVVNSSPRSHSATNGSIPSSSTKNEKKQKCPSKSPSAHKDLMENCIPNNQLSKPDALVRLEQDIKKLKADLQASRQIEQELRSQISSLTNTERGIRSEIGQLRQENELLQNKLHNAVQMKQKDKQMISQLEKKLKAEQEARAFVEKQLMEEKKRKKLEEATAARAVAFAAATRGECTETLRNRIRELETECKKLTIDIKLKEDQIRELEMKVQELRKYKENEKDTEVLMSALSAMQDKTQHLENSLSAETRIKLDLFSALGDAKRQLEIAQGQIIQKDQEIKDLKQKIAEVMAVMPSITYTAATSTLSPVSPHYSSKFVETSPSGLDPNASVYQPMKK
SIO_010081: MACO1
subclass of: SO_0000673
so part of: MACO1
location: complement(join(103216..103418,104529..104703,105663..105783,106574..106756,106952..107110,114264..114759,115250..115428,117607..117730,119729..119855,120549..120690,129283..129362))
location: region:103216-129362:-1
so has part: feature:129283-129362:-1:exon
so has part: feature:120549-120690:-1:exon
so has part: feature:119729-119855:-1:exon
so has part: feature:117607-117730:-1:exon
so has part: feature:115250-115428:-1:exon
so has part: feature:114264-114759:-1:exon
so has part: feature:106952-107110:-1:exon
so has part: feature:106574-106756:-1:exon
so has part: feature:105663-105783:-1:exon
so has part: feature:104529-104703:-1:exon
so has part: feature:103216-103418:-1:exon

XP_038023081.1
type: Protein
SIO_000068: ncbiprotein

position:103216:-1
position: 103216
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:129362:-1
position: 129362
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:129283-129362:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:120549-120690:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:119729-119855:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:117607-117730:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:115250-115428:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:114264-114759:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:106952-107110:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:106574-106756:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:105663-105783:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:104529-104703:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:103216-103418:-1:exon

LOC119713575
type: Gene
subclass of: SO_0000704
RO_0002162: 8839
gene: LOC119713575
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 129866..140713
location: region:129866-140713:1
so has part: feature:129866-140713:1:exon
subclass of: SO_0000010

119713575
type: Gene
SIO_000068: ncbigene

position:129866:1
position: 129866
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:140713:1
position: 140713
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:129866-140713:1:exon

LOC119713575
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8839
gene: LOC119713575
product: RH-like protein, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 20 samples with support for all annotated introns
transcript id: XM_038167160.1
SIO_010081: LOC119713575
subclass of: SO_0000673
so part of: LOC119713575
location: join(129866..131588,133089..133269,133487..133637,134306..134447,135825..135985,136303..136440,136672..136802,137600..137679,138783..138856,139357..140713)
location: region:129866-140713:1
so has part: feature:129866-131588:1:exon
so has part: feature:133089-133269:1:exon
so has part: feature:133487-133637:1:exon
so has part: feature:134306-134447:1:exon
so has part: feature:135825-135985:1:exon
so has part: feature:136303-136440:1:exon
so has part: feature:136672-136802:1:exon
so has part: feature:137600-137679:1:exon
so has part: feature:138783-138856:1:exon
so has part: feature:139357-140713:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:129866-131588:1:exon

position:131588:1
position: 131588
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:133089-133269:1:exon

position:133089:1
position: 133089
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:133269:1
position: 133269
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:133487-133637:1:exon

position:133487:1
position: 133487
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:133637:1
position: 133637
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:134306-134447:1:exon

position:134306:1
position: 134306
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:134447:1
position: 134447
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:135825-135985:1:exon

position:135825:1
position: 135825
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:135985:1
position: 135985
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:136303-136440:1:exon

position:136303:1
position: 136303
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:136440:1
position: 136440
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:136672-136802:1:exon

position:136672:1
position: 136672
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:136802:1
position: 136802
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:137600-137679:1:exon

position:137600:1
position: 137600
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:137679:1
position: 137679
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:138783-138856:1:exon

position:138783:1
position: 138783
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:138856:1
position: 138856
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:139357-140713:1:exon

position:139357:1
position: 139357
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC119713575
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8839
gene: LOC119713575
product: RH-like protein, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 22 samples with support for all annotated introns
transcript id: XM_038167159.1
SIO_010081: LOC119713575
subclass of: SO_0000673
so part of: LOC119713575
location: join(129867..131588,131954..132098,133089..133269,133487..133637,134306..134447,135825..135985,136303..136440,136672..136802,137600..137679,138783..138856,139357..140713)
location: region:129867-140713:1
so has part: feature:129867-131588:1:exon
so has part: feature:131954-132098:1:exon
so has part: feature:133089-133269:1:exon
so has part: feature:133487-133637:1:exon
so has part: feature:134306-134447:1:exon
so has part: feature:135825-135985:1:exon
so has part: feature:136303-136440:1:exon
so has part: feature:136672-136802:1:exon
so has part: feature:137600-137679:1:exon
so has part: feature:138783-138856:1:exon
so has part: feature:139357-140713:1:exon

position:129867:1
position: 129867
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:129867-131588:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:131954-132098:1:exon

position:131954:1
position: 131954
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:132098:1
position: 132098
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:133089-133269:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:133487-133637:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:134306-134447:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:135825-135985:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:136303-136440:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:136672-136802:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:137600-137679:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:138783-138856:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:139357-140713:1:exon

LOC119713575
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8839
gene: LOC119713575
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: RH-like protein isoform X2
translation: MEGFGSRTTRYFQDVNIMVIFGFGFFLAFLKRYSFSSTGFNLLIIVLGVQCSILMEGLLFPKETKERDPKIITMAAVSMTAVAISSGAVLGKTNPLQLIVMTVVEIIIFHVSRWINKQFLQIQDNISMKHVHLFGAYFGLAVSSRFSEPSPRSEKNASTPKSDLLSMLGTLFLWVFWPSFNSVLADRDKTKAIYNTYFALAVSAVTAFTLSVLTTKDGKFRMTHVHSAALAGGVTVCYTAESIDYPWIAMILGLLASVITILGSFCLQRCLNPALKIHDASGVHFTFGLPGLLGAVAQVVLSVIKKWTVSPSLGYMVMIYISDFCLTISVALITGFITGLILNFKLLKIIPVSQYFEDQFYWEFPHLAVGF
SIO_010081: LOC119713575
subclass of: SO_0000673
so part of: LOC119713575
location: join(131558..131588,133089..133269,133487..133637,134306..134447,135825..135985,136303..136440,136672..136802,137600..137679,138783..138856,139357..139383)
location: region:131558-139383:1
so has part: feature:131558-131588:1:exon
so has part: feature:133089-133269:1:exon
so has part: feature:133487-133637:1:exon
so has part: feature:134306-134447:1:exon
so has part: feature:135825-135985:1:exon
so has part: feature:136303-136440:1:exon
so has part: feature:136672-136802:1:exon
so has part: feature:137600-137679:1:exon
so has part: feature:138783-138856:1:exon
so has part: feature:139357-139383:1:exon

XP_038023088.1
type: Protein
SIO_000068: ncbiprotein

position:131558:1
position: 131558
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:139383:1
position: 139383
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:131558-131588:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:133089-133269:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:133487-133637:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:134306-134447:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:135825-135985:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:136303-136440:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:136672-136802:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:137600-137679:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:138783-138856:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:139357-139383:1:exon

LOC119713575
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8839
gene: LOC119713575
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: RH-like protein isoform X1
translation: MPSNYRSFRKSVPWLILFLETVFIILFYFLFPHYNDFITNISYTDFQDVNIMVIFGFGFFLAFLKRYSFSSTGFNLLIIVLGVQCSILMEGLLFPKETKERDPKIITMAAVSMTAVAISSGAVLGKTNPLQLIVMTVVEIIIFHVSRWINKQFLQIQDNISMKHVHLFGAYFGLAVSSRFSEPSPRSEKNASTPKSDLLSMLGTLFLWVFWPSFNSVLADRDKTKAIYNTYFALAVSAVTAFTLSVLTTKDGKFRMTHVHSAALAGGVTVCYTAESIDYPWIAMILGLLASVITILGSFCLQRCLNPALKIHDASGVHFTFGLPGLLGAVAQVVLSVIKKWTVSPSLGYMVMIYISDFCLTISVALITGFITGLILNFKLLKIIPVSQYFEDQFYWEFPHLAVGF
SIO_010081: LOC119713575
subclass of: SO_0000673
so part of: LOC119713575
location: join(131966..132098,133089..133269,133487..133637,134306..134447,135825..135985,136303..136440,136672..136802,137600..137679,138783..138856,139357..139383)
location: region:131966-139383:1
so has part: feature:131966-132098:1:exon
so has part: feature:133089-133269:1:exon
so has part: feature:133487-133637:1:exon
so has part: feature:134306-134447:1:exon
so has part: feature:135825-135985:1:exon
so has part: feature:136303-136440:1:exon
so has part: feature:136672-136802:1:exon
so has part: feature:137600-137679:1:exon
so has part: feature:138783-138856:1:exon
so has part: feature:139357-139383:1:exon

XP_038023087.1
type: Protein
SIO_000068: ncbiprotein

position:131966:1
position: 131966
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:131966-132098:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:133089-133269:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:133487-133637:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:134306-134447:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:135825-135985:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:136303-136440:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:136672-136802:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:137600-137679:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:138783-138856:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:139357-139383:1:exon

TMEM50A
type: Gene
subclass of: SO_0000704
RO_0002162: 8839
gene: TMEM50A
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(141609..146389)
location: region:141609-146389:-1
so has part: feature:141609-146389:-1:exon
subclass of: SO_0000010

119713579
type: Gene
SIO_000068: ncbigene

position:141609:-1
position: 141609
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:146389:-1
position: 146389
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:141609-146389:-1:exon

TMEM50A
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8839
gene: TMEM50A
product: transmembrane protein 50A, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 10 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 126 samples with support for all annotated introns
transcript id: XM_038167169.1
SIO_010081: TMEM50A
subclass of: SO_0000673
so part of: TMEM50A
location: complement(join(141609..142050,142335..142395,143387..143479,143686..143753,144781..144893,145242..145353,145654..145808))
location: region:141609-145808:-1
so has part: feature:145654-145808:-1:exon
so has part: feature:145242-145353:-1:exon
so has part: feature:144781-144893:-1:exon
so has part: feature:143686-143753:-1:exon
so has part: feature:143387-143479:-1:exon
so has part: feature:142335-142395:-1:exon
so has part: feature:141609-142050:-1:exon

position:145808:-1
position: 145808
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:145654-145808:-1:exon

position:145654:-1
position: 145654
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:145242-145353:-1:exon

position:145242:-1
position: 145242
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:145353:-1
position: 145353
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:144781-144893:-1:exon

position:144781:-1
position: 144781
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:144893:-1
position: 144893
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:143686-143753:-1:exon

position:143686:-1
position: 143686
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:143753:-1
position: 143753
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:143387-143479:-1:exon

position:143387:-1
position: 143387
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:143479:-1
position: 143479
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:142335-142395:-1:exon

position:142335:-1
position: 142335
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:142395:-1
position: 142395
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:141609-142050:-1:exon

position:142050:-1
position: 142050
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

TMEM50A
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8839
gene: TMEM50A
product: transmembrane protein 50A, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 10 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 112 samples with support for all annotated introns
transcript id: XM_038167170.1
SIO_010081: TMEM50A
subclass of: SO_0000673
so part of: TMEM50A
location: complement(join(141998..142050,142335..142395,143387..143479,143686..143753,144781..144893,145242..145353,146259..146389))
location: region:141998-146389:-1
so has part: feature:146259-146389:-1:exon
so has part: feature:145242-145353:-1:exon
so has part: feature:144781-144893:-1:exon
so has part: feature:143686-143753:-1:exon
so has part: feature:143387-143479:-1:exon
so has part: feature:142335-142395:-1:exon
so has part: feature:141998-142050:-1:exon

position:141998:-1
position: 141998
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:146259-146389:-1:exon

position:146259:-1
position: 146259
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:145242-145353:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:144781-144893:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:143686-143753:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:143387-143479:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:142335-142395:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:141998-142050:-1:exon

TMEM50A
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8839
gene: TMEM50A
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: transmembrane protein 50A
translation: MSGLLESVRCSECVDWGEKRNAIASVAAGVLFFTGWWIIIDAAVKYPKMEDFNHSYHACGVIATIAFLMINAVSNGQVRGDSYSEGCLGQTGARIWLFIGFMMAFGSLIASMWILFGGYVVKEKTVVYPGIAVFFQNAFIFFGGLVFKFGRTEDLWQ
SIO_010081: TMEM50A
subclass of: SO_0000673
so part of: TMEM50A
location: complement(join(142005..142050,142335..142395,143387..143479,143686..143753,144781..144893,145242..145334))
location: region:142005-145334:-1
so has part: feature:145242-145334:-1:exon
so has part: feature:144781-144893:-1:exon
so has part: feature:143686-143753:-1:exon
so has part: feature:143387-143479:-1:exon
so has part: feature:142335-142395:-1:exon
so has part: feature:142005-142050:-1:exon

XP_038023097.1
type: Protein
SIO_000068: ncbiprotein

position:142005:-1
position: 142005
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:145334:-1
position: 145334
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:145242-145334:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:144781-144893:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:143686-143753:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:143387-143479:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:142335-142395:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:142005-142050:-1:exon

TMEM50A
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8839
gene: TMEM50A
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: transmembrane protein 50A
translation: MSGLLESVRCSECVDWGEKRNAIASVAAGVLFFTGWWIIIDAAVKYPKMEDFNHSYHACGVIATIAFLMINAVSNGQVRGDSYSEGCLGQTGARIWLFIGFMMAFGSLIASMWILFGGYVVKEKTVVYPGIAVFFQNAFIFFGGLVFKFGRTEDLWQ
SIO_010081: TMEM50A
subclass of: SO_0000673
so part of: TMEM50A
location: complement(join(142005..142050,142335..142395,143387..143479,143686..143753,144781..144893,145242..145334))
location: region:142005-145334:-1
so has part: feature:145242-145334:-1:exon
so has part: feature:144781-144893:-1:exon
so has part: feature:143686-143753:-1:exon
so has part: feature:143387-143479:-1:exon
so has part: feature:142335-142395:-1:exon
so has part: feature:142005-142050:-1:exon

XP_038023098.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:145242-145334:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:144781-144893:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:143686-143753:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:143387-143479:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:142335-142395:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:142005-142050:-1:exon

RSRP1
type: Gene
subclass of: SO_0000704
RO_0002162: 8839
gene: RSRP1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 145869..150463
location: region:145869-150463:1
so has part: feature:145869-150463:1:exon
subclass of: SO_0000010

119713576
type: Gene
SIO_000068: ncbigene

position:145869:1
position: 145869
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:150463:1
position: 150463
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:145869-150463:1:exon

RSRP1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8839
gene: RSRP1
product: arginine and serine rich protein 1, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 120 samples with support for all annotated introns
transcript id: XM_038167161.1
SIO_010081: RSRP1
subclass of: SO_0000673
so part of: RSRP1
location: join(145869..146259,147019..147639,147987..148141,149367..149450,149941..150463)
location: region:145869-150463:1
so has part: feature:145869-146259:1:exon
so has part: feature:147019-147639:1:exon
so has part: feature:147987-148141:1:exon
so has part: feature:149367-149450:1:exon
so has part: feature:149941-150463:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:145869-146259:1:exon

position:146259:1
position: 146259
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:147019-147639:1:exon

position:147019:1
position: 147019
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:147639:1
position: 147639
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:147987-148141:1:exon

position:147987:1
position: 147987
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:148141:1
position: 148141
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:149367-149450:1:exon

position:149367:1
position: 149367
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:149450:1
position: 149450
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:149941-150463:1:exon

position:149941:1
position: 149941
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

RSRP1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8839
gene: RSRP1
product: arginine and serine rich protein 1, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 79 samples with support for all annotated introns
transcript id: XM_038167164.1
SIO_010081: RSRP1
subclass of: SO_0000673
so part of: RSRP1
location: join(145869..146039,146566..146720,147019..147639,147987..148141,149367..149450,149941..150463)
location: region:145869-150463:1
so has part: feature:145869-146039:1:exon
so has part: feature:146566-146720:1:exon
so has part: feature:147019-147639:1:exon
so has part: feature:147987-148141:1:exon
so has part: feature:149367-149450:1:exon
so has part: feature:149941-150463:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:145869-146039:1:exon

position:146039:1
position: 146039
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:146566-146720:1:exon

position:146566:1
position: 146566
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:146720:1
position: 146720
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:147019-147639:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:147987-148141:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:149367-149450:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:149941-150463:1:exon

RSRP1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8839
gene: RSRP1
product: arginine and serine rich protein 1, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 111 samples with support for all annotated introns
transcript id: XM_038167163.1
SIO_010081: RSRP1
subclass of: SO_0000673
so part of: RSRP1
location: join(145869..146039,147019..147639,147987..148141,149367..149450,149941..150463)
location: region:145869-150463:1
so has part: feature:145869-146039:1:exon
so has part: feature:147019-147639:1:exon
so has part: feature:147987-148141:1:exon
so has part: feature:149367-149450:1:exon
so has part: feature:149941-150463:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:145869-146039:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:147019-147639:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:147987-148141:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:149367-149450:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:149941-150463:1:exon

RSRP1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8839
gene: RSRP1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: arginine/serine-rich protein 1
translation: MEIGYYRTTIKTESDSESICMEEVTVKKTDDMADFMDDLKLSSPKKRYSCLRSERSCDRSSRRSSSRSSCSLQSSSSTSSSASSRSWSRSRSKSRVRQNSSRRYRRYSRSYSRSRSRSRGYMSYRGRYRARHSRRYHRSPRSRSRSRSWSRGRSYYRRSYSRSRSRSRGRRYYGFGRTIYPEVYRNWRSRSQTRSRSRSPLHLSEKEKRELLEIAKANAAKALGTDNIVLPASLKILTPSKETNNIKQEHEDSGESDEQPRRLTEDRTKSGMERATTQRSISFSPNNTMAKPVLQRPASHVVKEPSISPGREDDKKGSPYGQWVPVKKEEKKTFVNFSPKCALFRAR
SIO_010081: RSRP1
subclass of: SO_0000673
so part of: RSRP1
location: join(147021..147639,147987..148141,149367..149450,149941..150126)
location: region:147021-150126:1
so has part: feature:147021-147639:1:exon
so has part: feature:147987-148141:1:exon
so has part: feature:149367-149450:1:exon
so has part: feature:149941-150126:1:exon

XP_038023089.1
type: Protein
SIO_000068: ncbiprotein

position:147021:1
position: 147021
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:150126:1
position: 150126
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:147021-147639:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:147987-148141:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:149367-149450:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:149941-150126:1:exon

RSRP1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8839
gene: RSRP1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: arginine/serine-rich protein 1
translation: MEIGYYRTTIKTESDSESICMEEVTVKKTDDMADFMDDLKLSSPKKRYSCLRSERSCDRSSRRSSSRSSCSLQSSSSTSSSASSRSWSRSRSKSRVRQNSSRRYRRYSRSYSRSRSRSRGYMSYRGRYRARHSRRYHRSPRSRSRSRSWSRGRSYYRRSYSRSRSRSRGRRYYGFGRTIYPEVYRNWRSRSQTRSRSRSPLHLSEKEKRELLEIAKANAAKALGTDNIVLPASLKILTPSKETNNIKQEHEDSGESDEQPRRLTEDRTKSGMERATTQRSISFSPNNTMAKPVLQRPASHVVKEPSISPGREDDKKGSPYGQWVPVKKEEKKTFVNFSPKCALFRAR
SIO_010081: RSRP1
subclass of: SO_0000673
so part of: RSRP1
location: join(147021..147639,147987..148141,149367..149450,149941..150126)
location: region:147021-150126:1
so has part: feature:147021-147639:1:exon
so has part: feature:147987-148141:1:exon
so has part: feature:149367-149450:1:exon
so has part: feature:149941-150126:1:exon

XP_038023091.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:147021-147639:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:147987-148141:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:149367-149450:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:149941-150126:1:exon

RSRP1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8839
gene: RSRP1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: arginine/serine-rich protein 1
translation: MEIGYYRTTIKTESDSESICMEEVTVKKTDDMADFMDDLKLSSPKKRYSCLRSERSCDRSSRRSSSRSSCSLQSSSSTSSSASSRSWSRSRSKSRVRQNSSRRYRRYSRSYSRSRSRSRGYMSYRGRYRARHSRRYHRSPRSRSRSRSWSRGRSYYRRSYSRSRSRSRGRRYYGFGRTIYPEVYRNWRSRSQTRSRSRSPLHLSEKEKRELLEIAKANAAKALGTDNIVLPASLKILTPSKETNNIKQEHEDSGESDEQPRRLTEDRTKSGMERATTQRSISFSPNNTMAKPVLQRPASHVVKEPSISPGREDDKKGSPYGQWVPVKKEEKKTFVNFSPKCALFRAR
SIO_010081: RSRP1
subclass of: SO_0000673
so part of: RSRP1
location: join(147021..147639,147987..148141,149367..149450,149941..150126)
location: region:147021-150126:1
so has part: feature:147021-147639:1:exon
so has part: feature:147987-148141:1:exon
so has part: feature:149367-149450:1:exon
so has part: feature:149941-150126:1:exon

XP_038023092.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:147021-147639:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:147987-148141:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:149367-149450:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:149941-150126:1:exon

SYF2
type: Gene
subclass of: SO_0000704
RO_0002162: 8839
gene: SYF2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(151632..153955)
location: region:151632-153955:-1
so has part: feature:151632-153955:-1:exon
subclass of: SO_0000010

119713578
type: Gene
SIO_000068: ncbigene

position:151632:-1
position: 151632
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:153955:-1
position: 153955
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:151632-153955:-1:exon

SYF2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8839
gene: SYF2
product: SYF2 pre-mRNA splicing factor
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 126 samples with support for all annotated introns
transcript id: XM_038167168.1
SIO_010081: SYF2
subclass of: SO_0000673
so part of: SYF2
location: complement(join(151632..152064,152169..152267,152859..152949,153066..153183,153320..153445,153624..153725,153805..153955))
location: region:151632-153955:-1
so has part: feature:153805-153955:-1:exon
so has part: feature:153624-153725:-1:exon
so has part: feature:153320-153445:-1:exon
so has part: feature:153066-153183:-1:exon
so has part: feature:152859-152949:-1:exon
so has part: feature:152169-152267:-1:exon
so has part: feature:151632-152064:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:153805-153955:-1:exon

position:153805:-1
position: 153805
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:153624-153725:-1:exon

position:153624:-1
position: 153624
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:153725:-1
position: 153725
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:153320-153445:-1:exon

position:153320:-1
position: 153320
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:153445:-1
position: 153445
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:153066-153183:-1:exon

position:153066:-1
position: 153066
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:153183:-1
position: 153183
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:152859-152949:-1:exon

position:152859:-1
position: 152859
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:152949:-1
position: 152949
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:152169-152267:-1:exon

position:152169:-1
position: 152169
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:152267:-1
position: 152267
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:151632-152064:-1:exon

position:152064:-1
position: 152064
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

SYF2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8839
gene: SYF2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: pre-mRNA-splicing factor SYF2
translation: MAEVAAAAEARGCSEAPDGGSSGSEDEARPSPAAAAQKRERWLRKFRELHMKRNEARKLNHQEVVEEDKRLKLPPNWEAKKARLEWELKVEEKKKECAARGEDYERVKLLEISAEDAERWERKKKRKNPDLGFSDYAAAQLRQYQRLTRQIKPDLEQYEKLKEQYGEALYPTSDSLLHGTHVPTKEGIDRMVADLEKQIEKREKYSRRRPYNDDADIDYINERNAKFNKKAERFYGKYTAEIKQNLERGTAV
SIO_010081: SYF2
subclass of: SO_0000673
so part of: SYF2
location: complement(join(151899..152064,152169..152267,152859..152949,153066..153183,153320..153445,153624..153725,153805..153861))
location: region:151899-153861:-1
so has part: feature:153805-153861:-1:exon
so has part: feature:153624-153725:-1:exon
so has part: feature:153320-153445:-1:exon
so has part: feature:153066-153183:-1:exon
so has part: feature:152859-152949:-1:exon
so has part: feature:152169-152267:-1:exon
so has part: feature:151899-152064:-1:exon

XP_038023096.1
type: Protein
SIO_000068: ncbiprotein

position:151899:-1
position: 151899
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:153861:-1
position: 153861
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:153805-153861:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:153624-153725:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:153320-153445:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:153066-153183:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:152859-152949:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:152169-152267:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:151899-152064:-1:exon

RUNX3
type: Gene
subclass of: SO_0000704
RO_0002162: 8839
gene: RUNX3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 196131..255263
location: region:196131-255263:1
so has part: feature:196131-255263:1:exon
subclass of: SO_0000010

119713641
type: Gene
SIO_000068: ncbigene

position:196131:1
position: 196131
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:255263:1
position: 255263
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:196131-255263:1:exon

RUNX3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8839
gene: RUNX3
product: RUNX family transcription factor 3, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 14 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 45 samples with support for all annotated introns
transcript id: XM_038167360.1
SIO_010081: RUNX3
subclass of: SO_0000673
so part of: RUNX3
location: join(196131..196352,216389..216633,217688..217844,222728..222832,240352..240516,251642..255263)
location: region:196131-255263:1
so has part: feature:196131-196352:1:exon
so has part: feature:216389-216633:1:exon
so has part: feature:217688-217844:1:exon
so has part: feature:222728-222832:1:exon
so has part: feature:240352-240516:1:exon
so has part: feature:251642-255263:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:196131-196352:1:exon

position:196352:1
position: 196352
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:216389-216633:1:exon

position:216389:1
position: 216389
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:216633:1
position: 216633
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:217688-217844:1:exon

position:217688:1
position: 217688
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:217844:1
position: 217844
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:222728-222832:1:exon

position:222728:1
position: 222728
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:222832:1
position: 222832
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:240352-240516:1:exon

position:240352:1
position: 240352
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:240516:1
position: 240516
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:251642-255263:1:exon

position:251642:1
position: 251642
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

RUNX3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8839
gene: RUNX3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: runt-related transcription factor 3 isoform X3
translation: MASNSIFDSFTTYSSTFLRDPSTSRRFTPPSTAFPCGKMGENSGALGAAAPGARARPEVRSVVDVLADHAGELVRTDSPNFLCSVLPSHWRCNKTLPVAFKVVALGDVPDGTVVTVMAGNDENYSAELRNASAVMKNQVARFNDLRFVGRSGRGKSFTLTITVFTNPTQVATYHRAIKVTVDGPREPRRHRQKLEDQTKPFADRYGELERLRQSMRVTPTTPSPRGTLSTPSHFGSQAQTPIQGTSDLSPFSDPRQFDRSFPTLPALTETRFSDPRMHYPGAMSAAFPYTATPSATGIGGISMTSMPTTTRFHHTYLPPPYPGSTQNQSGPFQANPSPYHLYYGTSSGSYQFSMVAGGERSPTRMLSSCTSASAGNNLMNPNLGNQNDGVDADGSHSNSPTTMTTTGRMDESVWRPY
SIO_010081: RUNX3
subclass of: SO_0000673
so part of: RUNX3
location: join(196295..196352,216389..216633,217688..217844,222728..222832,240352..240516,251642..252165)
location: region:196295-252165:1
so has part: feature:196295-196352:1:exon
so has part: feature:216389-216633:1:exon
so has part: feature:217688-217844:1:exon
so has part: feature:222728-222832:1:exon
so has part: feature:240352-240516:1:exon
so has part: feature:251642-252165:1:exon

XP_038023288.1
type: Protein
SIO_000068: ncbiprotein

position:196295:1
position: 196295
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:252165:1
position: 252165
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:196295-196352:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:216389-216633:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:217688-217844:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:222728-222832:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:240352-240516:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:251642-252165:1:exon

RUNX3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8839
gene: RUNX3
product: RUNX family transcription factor 3, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 28 samples with support for all annotated introns
transcript id: XM_038167359.1
SIO_010081: RUNX3
subclass of: SO_0000673
so part of: RUNX3
location: join(215958..216633,217688..217844,222728..222832,251642..255263)
location: region:215958-255263:1
so has part: feature:215958-216633:1:exon
so has part: feature:217688-217844:1:exon
so has part: feature:222728-222832:1:exon
so has part: feature:251642-255263:1:exon

position:215958:1
position: 215958
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:215958-216633:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:217688-217844:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:222728-222832:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:251642-255263:1:exon

RUNX3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8839
gene: RUNX3
product: RUNX family transcription factor 3, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 26 samples with support for all annotated introns
transcript id: XM_038167358.1
SIO_010081: RUNX3
subclass of: SO_0000673
so part of: RUNX3
location: join(215959..216633,217688..217844,240352..240516,251642..255263)
location: region:215959-255263:1
so has part: feature:215959-216633:1:exon
so has part: feature:217688-217844:1:exon
so has part: feature:240352-240516:1:exon
so has part: feature:251642-255263:1:exon

position:215959:1
position: 215959
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:215959-216633:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:217688-217844:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:240352-240516:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:251642-255263:1:exon

RUNX3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8839
gene: RUNX3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: runt-related transcription factor 3 isoform X2
translation: MRIPVDPSTSRRFTPPSTAFPCGKMGENSGALGAAAPGARARPEVRSVVDVLADHAGELVRTDSPNFLCSVLPSHWRCNKTLPVAFKVVALGDVPDGTVVTVMAGNDENYSAELRNASAVMKNQVARFNDLRFVGRSGRGKSFTLTITVFTNPTQVATYHRAIKVTVDGPREPRSTSDLSPFSDPRQFDRSFPTLPALTETRFSDPRMHYPGAMSAAFPYTATPSATGIGGISMTSMPTTTRFHHTYLPPPYPGSTQNQSGPFQANPSPYHLYYGTSSGSYQFSMVAGGERSPTRMLSSCTSASAGNNLMNPNLGNQNDGVDADGSHSNSPTTMTTTGRMDESVWRPY
SIO_010081: RUNX3
subclass of: SO_0000673
so part of: RUNX3
location: join(216373..216633,217688..217844,222728..222832,251642..252165)
location: region:216373-252165:1
so has part: feature:216373-216633:1:exon
so has part: feature:217688-217844:1:exon
so has part: feature:222728-222832:1:exon
so has part: feature:251642-252165:1:exon

XP_038023287.1
type: Protein
SIO_000068: ncbiprotein

position:216373:1
position: 216373
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:216373-216633:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:217688-217844:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:222728-222832:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:251642-252165:1:exon

RUNX3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8839
gene: RUNX3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: runt-related transcription factor 3 isoform X1
translation: MRIPVDPSTSRRFTPPSTAFPCGKMGENSGALGAAAPGARARPEVRSVVDVLADHAGELVRTDSPNFLCSVLPSHWRCNKTLPVAFKVVALGDVPDGTVVTVMAGNDENYSAELRNASAVMKNQVARFNDLRFVGRSGRGHRQKLEDQTKPFADRYGELERLRQSMRVTPTTPSPRGTLSTPSHFGSQAQTPIQGTSDLSPFSDPRQFDRSFPTLPALTETRFSDPRMHYPGAMSAAFPYTATPSATGIGGISMTSMPTTTRFHHTYLPPPYPGSTQNQSGPFQANPSPYHLYYGTSSGSYQFSMVAGGERSPTRMLSSCTSASAGNNLMNPNLGNQNDGVDADGSHSNSPTTMTTTGRMDESVWRPY
SIO_010081: RUNX3
subclass of: SO_0000673
so part of: RUNX3
location: join(216373..216633,217688..217844,240352..240516,251642..252165)
location: region:216373-252165:1
so has part: feature:216373-216633:1:exon
so has part: feature:217688-217844:1:exon
so has part: feature:240352-240516:1:exon
so has part: feature:251642-252165:1:exon

XP_038023286.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:216373-216633:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:217688-217844:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:240352-240516:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:251642-252165:1:exon

CLIC4
type: Gene
subclass of: SO_0000704
RO_0002162: 8839
gene: CLIC4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(288305..317667)
location: region:288305-317667:-1
so has part: feature:288305-317667:-1:exon
subclass of: SO_0000010

119713590
type: Gene
SIO_000068: ncbigene

position:288305:-1
position: 288305
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:317667:-1
position: 317667
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:288305-317667:-1:exon

CLIC4
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8839
gene: CLIC4
product: chloride intracellular channel 4, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 ESTs, 16 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 126 samples with support for all annotated introns
transcript id: XM_038167203.1
SIO_010081: CLIC4
subclass of: SO_0000673
so part of: CLIC4
location: complement(join(288305..292580,293389..293570,294918..295024,296340..296465,301930..302039,317506..317667))
location: region:288305-317667:-1
so has part: feature:317506-317667:-1:exon
so has part: feature:301930-302039:-1:exon
so has part: feature:296340-296465:-1:exon
so has part: feature:294918-295024:-1:exon
so has part: feature:293389-293570:-1:exon
so has part: feature:288305-292580:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:317506-317667:-1:exon

position:317506:-1
position: 317506
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:301930-302039:-1:exon

position:301930:-1
position: 301930
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:302039:-1
position: 302039
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:296340-296465:-1:exon

position:296340:-1
position: 296340
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:296465:-1
position: 296465
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:294918-295024:-1:exon

position:294918:-1
position: 294918
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:295024:-1
position: 295024
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:293389-293570:-1:exon

position:293389:-1
position: 293389
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:293570:-1
position: 293570
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:288305-292580:-1:exon

position:292580:-1
position: 292580
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

CLIC4
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8839
gene: CLIC4
product: chloride intracellular channel 4, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 ESTs, 14 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 60 samples with support for all annotated introns
transcript id: XM_038167204.1
SIO_010081: CLIC4
subclass of: SO_0000673
so part of: CLIC4
location: complement(join(288305..292580,293389..293570,294918..295024,296340..296465,301930..302039,304456..304491))
location: region:288305-304491:-1
so has part: feature:304456-304491:-1:exon
so has part: feature:301930-302039:-1:exon
so has part: feature:296340-296465:-1:exon
so has part: feature:294918-295024:-1:exon
so has part: feature:293389-293570:-1:exon
so has part: feature:288305-292580:-1:exon

position:304491:-1
position: 304491
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:304456-304491:-1:exon

position:304456:-1
position: 304456
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:301930-302039:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:296340-296465:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:294918-295024:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:293389-293570:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:288305-292580:-1:exon

CLIC4
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8839
gene: CLIC4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: chloride intracellular channel protein 4 isoform X1
translation: MALSVPVNGLKEGDKEPVIELFVKAGSDGESIGNCPFSQRLFMILWLKGVVFSVTTVDLKRKPADLQNLAPGTHPPFITYNGEVKTDVNKIEEFLEDVLAPPKYLKLSPKHPESNTAGMDIFAKFSAFIKNSRPEANEALERGLLKTLQKLDEYLNSPLPDEIDENSMEDITISTRKFLDGNEMTLADCNLLPKLHIVKVVAKKYRNFEIPKEMTGIWRYLTNAYSRDEFTNTCPGDKEIEIAYSDVAKRLTK
SIO_010081: CLIC4
subclass of: SO_0000673
so part of: CLIC4
location: complement(join(292416..292580,293389..293570,294918..295024,296340..296465,301930..302039,317506..317577))
location: region:292416-317577:-1
so has part: feature:317506-317577:-1:exon
so has part: feature:301930-302039:-1:exon
so has part: feature:296340-296465:-1:exon
so has part: feature:294918-295024:-1:exon
so has part: feature:293389-293570:-1:exon
so has part: feature:292416-292580:-1:exon

XP_038023131.1
type: Protein
SIO_000068: ncbiprotein

position:292416:-1
position: 292416
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:317577:-1
position: 317577
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:317506-317577:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:301930-302039:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:296340-296465:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:294918-295024:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:293389-293570:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:292416-292580:-1:exon

CLIC4
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8839
gene: CLIC4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: chloride intracellular channel protein 4 isoform X2
translation: MPMFSSTAGSDGESIGNCPFSQRLFMILWLKGVVFSVTTVDLKRKPADLQNLAPGTHPPFITYNGEVKTDVNKIEEFLEDVLAPPKYLKLSPKHPESNTAGMDIFAKFSAFIKNSRPEANEALERGLLKTLQKLDEYLNSPLPDEIDENSMEDITISTRKFLDGNEMTLADCNLLPKLHIVKVVAKKYRNFEIPKEMTGIWRYLTNAYSRDEFTNTCPGDKEIEIAYSDVAKRLTK
SIO_010081: CLIC4
subclass of: SO_0000673
so part of: CLIC4
location: complement(join(292416..292580,293389..293570,294918..295024,296340..296465,301930..302039,304456..304476))
location: region:292416-304476:-1
so has part: feature:304456-304476:-1:exon
so has part: feature:301930-302039:-1:exon
so has part: feature:296340-296465:-1:exon
so has part: feature:294918-295024:-1:exon
so has part: feature:293389-293570:-1:exon
so has part: feature:292416-292580:-1:exon

XP_038023132.1
type: Protein
SIO_000068: ncbiprotein

position:304476:-1
position: 304476
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:304456-304476:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:301930-302039:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:296340-296465:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:294918-295024:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:293389-293570:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:292416-292580:-1:exon

SRRM1
type: Gene
subclass of: SO_0000704
RO_0002162: 8839
gene: SRRM1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(333031..350993)
location: region:333031-350993:-1
so has part: feature:333031-350993:-1:exon
subclass of: SO_0000010

119713612
type: Gene
SIO_000068: ncbigene

position:333031:-1
position: 333031
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:350993:-1
position: 350993
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:333031-350993:-1:exon

SRRM1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8839
gene: SRRM1
product: serine and arginine repetitive matrix 1, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 113 samples with support for all annotated introns
transcript id: XM_038167281.1
SIO_010081: SRRM1
subclass of: SO_0000673
so part of: SRRM1
location: complement(join(333031..334016,334234..334428,335192..335378,336327..336785,337124..337228,338690..338731,339298..339442,340045..340131,340472..340552,340699..340970,342483..342584,343155..343358,343851..344051,344481..344593,344808..344978,347050..347172,348657..348746,350864..350993))
location: region:333031-350993:-1
so has part: feature:350864-350993:-1:exon
so has part: feature:348657-348746:-1:exon
so has part: feature:347050-347172:-1:exon
so has part: feature:344808-344978:-1:exon
so has part: feature:344481-344593:-1:exon
so has part: feature:343851-344051:-1:exon
so has part: feature:343155-343358:-1:exon
so has part: feature:342483-342584:-1:exon
so has part: feature:340699-340970:-1:exon
so has part: feature:340472-340552:-1:exon
so has part: feature:340045-340131:-1:exon
so has part: feature:339298-339442:-1:exon
so has part: feature:338690-338731:-1:exon
so has part: feature:337124-337228:-1:exon
so has part: feature:336327-336785:-1:exon
so has part: feature:335192-335378:-1:exon
so has part: feature:334234-334428:-1:exon
so has part: feature:333031-334016:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:350864-350993:-1:exon

position:350864:-1
position: 350864
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:348657-348746:-1:exon

position:348657:-1
position: 348657
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:348746:-1
position: 348746
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:347050-347172:-1:exon

position:347050:-1
position: 347050
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:347172:-1
position: 347172
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:344808-344978:-1:exon

position:344808:-1
position: 344808
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:344978:-1
position: 344978
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:344481-344593:-1:exon

position:344481:-1
position: 344481
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:344593:-1
position: 344593
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:343851-344051:-1:exon

position:343851:-1
position: 343851
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:344051:-1
position: 344051
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:343155-343358:-1:exon

position:343155:-1
position: 343155
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:343358:-1
position: 343358
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:342483-342584:-1:exon

position:342483:-1
position: 342483
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:342584:-1
position: 342584
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:340699-340970:-1:exon

position:340699:-1
position: 340699
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:340970:-1
position: 340970
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
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urn:…
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SRRM1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8839
gene: SRRM1
product: serine and arginine repetitive matrix 1, transcript variant X7
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 126 samples with support for all annotated introns
transcript id: XM_038167285.1
SIO_010081: SRRM1
subclass of: SO_0000673
so part of: SRRM1
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location: region:333031-350993:-1
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reference: sequence
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SRRM1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8839
gene: SRRM1
product: serine and arginine repetitive matrix 1, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 113 samples with support for all annotated introns
transcript id: XM_038167280.1
SIO_010081: SRRM1
subclass of: SO_0000673
so part of: SRRM1
location: complement(join(333031..334016,334234..334428,335192..335378,336327..336785,337124..337228,338690..338731,339298..339442,340045..340131,340472..340552,340699..340970,342483..342587,343155..343358,343851..344051,344481..344593,344808..344978,347050..347172,348657..348746,350864..350993))
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urn:…
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SIO_000628: feature:333031-334016:-1:exon

SRRM1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8839
gene: SRRM1
product: serine and arginine repetitive matrix 1, transcript variant X6
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 124 samples with support for all annotated introns
transcript id: XM_038167283.1
SIO_010081: SRRM1
subclass of: SO_0000673
so part of: SRRM1
location: complement(join(333031..334016,334234..334428,335192..335378,336327..336785,337124..337225,339298..339442,340045..340131,340472..340552,340699..340970,342483..342602,343155..343358,343851..344051,344481..344593,344808..344978,347050..347172,348657..348746,350864..350993))
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SIO_000300: 8
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reference: sequence
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urn:…
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SIO_000300: 17
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SRRM1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8839
gene: SRRM1
product: serine and arginine repetitive matrix 1, transcript variant X5
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 126 samples with support for all annotated introns
transcript id: XM_038167282.1
SIO_010081: SRRM1
subclass of: SO_0000673
so part of: SRRM1
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urn:…
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SRRM1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8839
gene: SRRM1
product: serine and arginine repetitive matrix 1, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 33 samples with support for all annotated introns
transcript id: XM_038167279.1
SIO_010081: SRRM1
subclass of: SO_0000673
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urn:…
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SRRM1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8839
gene: SRRM1
product: serine and arginine repetitive matrix 1, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 113 samples with support for all annotated introns
transcript id: XM_038167278.1
SIO_010081: SRRM1
subclass of: SO_0000673
so part of: SRRM1
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urn:…
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SIO_000628: feature:339298-339442:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:338690-338731:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:337124-337228:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:336327-336785:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:335192-335378:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:334234-334428:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:333031-334016:-1:exon

SRRM1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8839
gene: SRRM1
product: serine and arginine repetitive matrix 1, transcript variant X8
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 106 samples with support for all annotated introns
transcript id: XM_038167286.1
SIO_010081: SRRM1
subclass of: SO_0000673
so part of: SRRM1
location: complement(join(333031..334016,334234..334428,335192..335378,336327..336785,337124..337228,338690..338731,339298..339442,340045..340131,340472..340552,340699..340970,342483..342602,343155..343358,343851..344051,344481..344593,344808..344978,346637..346765))
location: region:333031-346765:-1
so has part: feature:346637-346765:-1:exon
so has part: feature:344808-344978:-1:exon
so has part: feature:344481-344593:-1:exon
so has part: feature:343851-344051:-1:exon
so has part: feature:343155-343358:-1:exon
so has part: feature:342483-342602:-1:exon
so has part: feature:340699-340970:-1:exon
so has part: feature:340472-340552:-1:exon
so has part: feature:340045-340131:-1:exon
so has part: feature:339298-339442:-1:exon
so has part: feature:338690-338731:-1:exon
so has part: feature:337124-337228:-1:exon
so has part: feature:336327-336785:-1:exon
so has part: feature:335192-335378:-1:exon
so has part: feature:334234-334428:-1:exon
so has part: feature:333031-334016:-1:exon

position:346765:-1
position: 346765
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:346637-346765:-1:exon

position:346637:-1
position: 346637
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:344808-344978:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:344481-344593:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:343851-344051:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:343155-343358:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:342483-342602:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:340699-340970:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:340472-340552:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:340045-340131:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:339298-339442:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:338690-338731:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:337124-337228:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:336327-336785:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:335192-335378:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:334234-334428:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:333031-334016:-1:exon

SRRM1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8839
gene: SRRM1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: serine/arginine repetitive matrix protein 1 isoform X4
translation: MDAGFFRGTSAEQDNRFSNKQKKLLKQLKFAECLEKKVDMSKVNLEVIKPWITKRVTEILGFEDDVVIEFIFNQLEVKNPDSKMMQINLTGFLNGKNAREFMGELWPLLLSAQENIAGIPTAFLELKKEEIKQRQIEQEKLASMKKQDEDKEKRDKEDKDNREKRDRSRSPRRRKSRSPSPRRRSSPVRRERKRSHSRSPHHRTKSRSATPAAEKKEATPEPEPSVKPKETVVQEATSNSDIPKAPKSEPPVPETKETSPERNSKKEREKEKEKTRQRSPTRSKSRSRSRSRSPSHSRPRRRHRSRSRRPSPRRRPSPRRRSPPRRLPPPPRHRRSRSPVRRRRRSSASLSGSSSSSSSSRSRSPPKKPPKRTVSSPPRKTRRMSPSASPPRRRHRPSPPASPPPKPRRSPTPQQSNRSRKSRGSVSPGRASAPKHKSTEKRESPSPAPKPRKADLSESEEDKGGKMAAADSVQQRRQYRRQNQQSSSDSGSSSSSEEERPKRSNVKNGEVGRRRRHSHSRSPSPSPRKRQKESSPRMQMEKRWQSPVMKSRRRRSPSPPPARRRRSPSPAPPPRRRRSPSLPRRRSPSPPPRRRSPSPRRYSPPIQRRYSPSPPPKRRTASPPPPKRRASPSPQSKRRVSHSPPPKQRSSPAAKRRSPSISSKHRKGSPPSRSNREARSPPQNKRHSPSPRPRASHTSASPPPLRRGASASPQRRQSPSPSTRPIRRVSRTPEPKKTKASTPSPRSARRVSSSRSASGSPEPAPKKHQGPPSPARSRSPSGNWSPAKKAKSPTQSPSPARNSDQEGGGKKKKKKKDKKHKKDKKHKKHKKHKKEKAAAATAAAAVAAADTTSAQEEQEAETEPKKETESEPEDNLDDLEKHLREKALRSMRKAQVSPPS
SIO_010081: SRRM1
subclass of: SO_0000673
so part of: SRRM1
location: complement(join(333912..334016,334234..334428,335192..335378,336327..336785,337124..337228,338690..338731,339298..339442,340045..340131,340472..340552,340699..340970,342483..342584,343155..343358,343851..344051,344481..344593,344808..344978,347050..347172,348657..348746,350864..350884))
location: region:333912-350884:-1
so has part: feature:350864-350884:-1:exon
so has part: feature:348657-348746:-1:exon
so has part: feature:347050-347172:-1:exon
so has part: feature:344808-344978:-1:exon
so has part: feature:344481-344593:-1:exon
so has part: feature:343851-344051:-1:exon
so has part: feature:343155-343358:-1:exon
so has part: feature:342483-342584:-1:exon
so has part: feature:340699-340970:-1:exon
so has part: feature:340472-340552:-1:exon
so has part: feature:340045-340131:-1:exon
so has part: feature:339298-339442:-1:exon
so has part: feature:338690-338731:-1:exon
so has part: feature:337124-337228:-1:exon
so has part: feature:336327-336785:-1:exon
so has part: feature:335192-335378:-1:exon
so has part: feature:334234-334428:-1:exon
so has part: feature:333912-334016:-1:exon

XP_038023209.1
type: Protein
SIO_000068: ncbiprotein

position:333912:-1
position: 333912
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:350884:-1
position: 350884
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:350864-350884:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:348657-348746:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:347050-347172:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:344808-344978:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:344481-344593:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:343851-344051:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:343155-343358:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:342483-342584:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:340699-340970:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:340472-340552:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:340045-340131:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:339298-339442:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:338690-338731:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:337124-337228:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:336327-336785:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:335192-335378:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:334234-334428:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:333912-334016:-1:exon

SRRM1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8839
gene: SRRM1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: serine/arginine repetitive matrix protein 1 isoform X7
translation: MDAGFFRGTSAEQDNRFSNKQKKLLKQLKFAECLEKKVDMSKVNLEVIKPWITKRVTEILGFEDDVVIEFIFNQLEVKNPDSKMMQINLTGFLNGKNAREFMGELWPLLLSAQENIAGIPTAFLELKKEEIKQRQIEQEKLASMKKQDEDKEKRDKEDKDNREKRDRSRSPRRRKSRSPSPRRRSSPVRRERKRSHSRSPHHRTKSRSATPAAEKKEATPEPEPSVKPKETVVQEATSNSDIPKAPKSEPPVPETKETSPERNSKKEREKEKEKTRQRSPTRSKSRSRSRSRSPSHSRPRRRHRSRSRRRPSPRRRPSPRRRSPPRRLPPPPRHRRSRSPVRRRRRSSASLSGSSSSSSSSRSRSPPKKPPKRTVSSPPRKTRRMSPSASPPRRRHRPSPPASPPPKPRRSPTPQQSNRSRKSRGSVSPGRASAPKHKSTEKRESPSPAPKPRKADLSESEEDKGGKMAAADSVQQRRQYRRQNQQSSSDSGSSSSSEEERPKRSNVKNGEVGRRRRHSHSRSPSPSPRKRQKESSPRRRRRSPSPPPARRRRSPSPAPPPRRRRSPSLPRRRSPSPPPRRRSPSPRRYSPPIQRRYSPSPPPKRRTASPPPPKRRASPSPQSKRRVSHSPPPKQRSSPAAKRRSPSISSKHRKGSPPSRSNREARSPPQNKRHSPSPRPRASHTSASPPPLRRGASASPQRRQSPSPSTRPIRRVSRTPEPKKTKASTPSPRSARRVSSSRSASGSPEPAPKKHQGPPSPARSRSPSGNWSPAKKAKSPTQSPSPARNSDQEGGGKKKKKKKDKKHKKDKKHKKHKKHKKEKAAAATAAAAVAAADTTSAQEEQEAETEPKKETESEPEDNLDDLEKHLREKALRSMRKAQVSPPS
SIO_010081: SRRM1
subclass of: SO_0000673
so part of: SRRM1
location: complement(join(333912..334016,334234..334428,335192..335378,336327..336785,337124..337228,339298..339442,340045..340131,340472..340552,340699..340970,342483..342587,343155..343358,343851..344051,344481..344593,344808..344978,347050..347172,348657..348746,350864..350884))
location: region:333912-350884:-1
so has part: feature:350864-350884:-1:exon
so has part: feature:348657-348746:-1:exon
so has part: feature:347050-347172:-1:exon
so has part: feature:344808-344978:-1:exon
so has part: feature:344481-344593:-1:exon
so has part: feature:343851-344051:-1:exon
so has part: feature:343155-343358:-1:exon
so has part: feature:342483-342587:-1:exon
so has part: feature:340699-340970:-1:exon
so has part: feature:340472-340552:-1:exon
so has part: feature:340045-340131:-1:exon
so has part: feature:339298-339442:-1:exon
so has part: feature:337124-337228:-1:exon
so has part: feature:336327-336785:-1:exon
so has part: feature:335192-335378:-1:exon
so has part: feature:334234-334428:-1:exon
so has part: feature:333912-334016:-1:exon

XP_038023213.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:350864-350884:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:348657-348746:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:347050-347172:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:344808-344978:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:344481-344593:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:343851-344051:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:343155-343358:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:342483-342587:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:340699-340970:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:340472-340552:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:340045-340131:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:339298-339442:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:337124-337228:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:336327-336785:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:335192-335378:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:334234-334428:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:333912-334016:-1:exon

SRRM1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8839
gene: SRRM1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: serine/arginine repetitive matrix protein 1 isoform X3
translation: MDAGFFRGTSAEQDNRFSNKQKKLLKQLKFAECLEKKVDMSKVNLEVIKPWITKRVTEILGFEDDVVIEFIFNQLEVKNPDSKMMQINLTGFLNGKNAREFMGELWPLLLSAQENIAGIPTAFLELKKEEIKQRQIEQEKLASMKKQDEDKEKRDKEDKDNREKRDRSRSPRRRKSRSPSPRRRSSPVRRERKRSHSRSPHHRTKSRSATPAAEKKEATPEPEPSVKPKETVVQEATSNSDIPKAPKSEPPVPETKETSPERNSKKEREKEKEKTRQRSPTRSKSRSRSRSRSPSHSRPRRRHRSRSRRRPSPRRRPSPRRRSPPRRLPPPPRHRRSRSPVRRRRRSSASLSGSSSSSSSSRSRSPPKKPPKRTVSSPPRKTRRMSPSASPPRRRHRPSPPASPPPKPRRSPTPQQSNRSRKSRGSVSPGRASAPKHKSTEKRESPSPAPKPRKADLSESEEDKGGKMAAADSVQQRRQYRRQNQQSSSDSGSSSSSEEERPKRSNVKNGEVGRRRRHSHSRSPSPSPRKRQKESSPRMQMEKRWQSPVMKSRRRRSPSPPPARRRRSPSPAPPPRRRRSPSLPRRRSPSPPPRRRSPSPRRYSPPIQRRYSPSPPPKRRTASPPPPKRRASPSPQSKRRVSHSPPPKQRSSPAAKRRSPSISSKHRKGSPPSRSNREARSPPQNKRHSPSPRPRASHTSASPPPLRRGASASPQRRQSPSPSTRPIRRVSRTPEPKKTKASTPSPRSARRVSSSRSASGSPEPAPKKHQGPPSPARSRSPSGNWSPAKKAKSPTQSPSPARNSDQEGGGKKKKKKKDKKHKKDKKHKKHKKHKKEKAAAATAAAAVAAADTTSAQEEQEAETEPKKETESEPEDNLDDLEKHLREKALRSMRKAQVSPPS
SIO_010081: SRRM1
subclass of: SO_0000673
so part of: SRRM1
location: complement(join(333912..334016,334234..334428,335192..335378,336327..336785,337124..337228,338690..338731,339298..339442,340045..340131,340472..340552,340699..340970,342483..342587,343155..343358,343851..344051,344481..344593,344808..344978,347050..347172,348657..348746,350864..350884))
location: region:333912-350884:-1
so has part: feature:350864-350884:-1:exon
so has part: feature:348657-348746:-1:exon
so has part: feature:347050-347172:-1:exon
so has part: feature:344808-344978:-1:exon
so has part: feature:344481-344593:-1:exon
so has part: feature:343851-344051:-1:exon
so has part: feature:343155-343358:-1:exon
so has part: feature:342483-342587:-1:exon
so has part: feature:340699-340970:-1:exon
so has part: feature:340472-340552:-1:exon
so has part: feature:340045-340131:-1:exon
so has part: feature:339298-339442:-1:exon
so has part: feature:338690-338731:-1:exon
so has part: feature:337124-337228:-1:exon
so has part: feature:336327-336785:-1:exon
so has part: feature:335192-335378:-1:exon
so has part: feature:334234-334428:-1:exon
so has part: feature:333912-334016:-1:exon

XP_038023208.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:350864-350884:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:348657-348746:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:347050-347172:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:344808-344978:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:344481-344593:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:343851-344051:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:343155-343358:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:342483-342587:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:340699-340970:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:340472-340552:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:340045-340131:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:339298-339442:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:338690-338731:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:337124-337228:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:336327-336785:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:335192-335378:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:334234-334428:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:333912-334016:-1:exon

SRRM1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8839
gene: SRRM1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: serine/arginine repetitive matrix protein 1 isoform X6
translation: MDAGFFRGTSAEQDNRFSNKQKKLLKQLKFAECLEKKVDMSKVNLEVIKPWITKRVTEILGFEDDVVIEFIFNQLEVKNPDSKMMQINLTGFLNGKNAREFMGELWPLLLSAQENIAGIPTAFLELKKEEIKQRQIEQEKLASMKKQDEDKEKRDKEDKDNREKRDRSRSPRRRKSRSPSPRRRSSPVRRERKRSHSRSPHHRTKSRSATPAAEKKEATPEPEPSVKPKETVVQEATSNSDIPKAPKSEPPVPETKETSPERNSKKEREKEKEKTRQRSPTRSKSRSRSRSRSPSHSRPRRRHRSRSRSYSPRRRPSPRRRPSPRRRSPPRRLPPPPRHRRSRSPVRRRRRSSASLSGSSSSSSSSRSRSPPKKPPKRTVSSPPRKTRRMSPSASPPRRRHRPSPPASPPPKPRRSPTPQQSNRSRKSRGSVSPGRASAPKHKSTEKRESPSPAPKPRKADLSESEEDKGGKMAAADSVQQRRQYRRQNQQSSSDSGSSSSSEEERPKRSNVKNGEVGRRRRHSHSRSPSPSPRKRQKESSPRRRRSPSPPPARRRRSPSPAPPPRRRRSPSLPRRRSPSPPPRRRSPSPRRYSPPIQRRYSPSPPPKRRTASPPPPKRRASPSPQSKRRVSHSPPPKQRSSPAAKRRSPSISSKHRKGSPPSRSNREARSPPQNKRHSPSPRPRASHTSASPPPLRRGASASPQRRQSPSPSTRPIRRVSRTPEPKKTKASTPSPRSARRVSSSRSASGSPEPAPKKHQGPPSPARSRSPSGNWSPAKKAKSPTQSPSPARNSDQEGGGKKKKKKKDKKHKKDKKHKKHKKHKKEKAAAATAAAAVAAADTTSAQEEQEAETEPKKETESEPEDNLDDLEKHLREKALRSMRKAQVSPPS
SIO_010081: SRRM1
subclass of: SO_0000673
so part of: SRRM1
location: complement(join(333912..334016,334234..334428,335192..335378,336327..336785,337124..337225,339298..339442,340045..340131,340472..340552,340699..340970,342483..342602,343155..343358,343851..344051,344481..344593,344808..344978,347050..347172,348657..348746,350864..350884))
location: region:333912-350884:-1
so has part: feature:350864-350884:-1:exon
so has part: feature:348657-348746:-1:exon
so has part: feature:347050-347172:-1:exon
so has part: feature:344808-344978:-1:exon
so has part: feature:344481-344593:-1:exon
so has part: feature:343851-344051:-1:exon
so has part: feature:343155-343358:-1:exon
so has part: feature:342483-342602:-1:exon
so has part: feature:340699-340970:-1:exon
so has part: feature:340472-340552:-1:exon
so has part: feature:340045-340131:-1:exon
so has part: feature:339298-339442:-1:exon
so has part: feature:337124-337225:-1:exon
so has part: feature:336327-336785:-1:exon
so has part: feature:335192-335378:-1:exon
so has part: feature:334234-334428:-1:exon
so has part: feature:333912-334016:-1:exon

XP_038023211.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:350864-350884:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:348657-348746:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:347050-347172:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:344808-344978:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:344481-344593:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:343851-344051:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:343155-343358:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:342483-342602:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:340699-340970:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:340472-340552:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:340045-340131:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:339298-339442:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:337124-337225:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:336327-336785:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:335192-335378:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:334234-334428:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:333912-334016:-1:exon

SRRM1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8839
gene: SRRM1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: serine/arginine repetitive matrix protein 1 isoform X5
translation: MDAGFFRGTSAEQDNRFSNKQKKLLKQLKFAECLEKKVDMSKVNLEVIKPWITKRVTEILGFEDDVVIEFIFNQLEVKNPDSKMMQINLTGFLNGKNAREFMGELWPLLLSAQENIAGIPTAFLELKKEEIKQRQIEQEKLASMKKQDEDKEKRDKEDKDNREKRDRSRSPRRRKSRSPSPRRRSSPVRRERKRSHSRSPHHRTKSRSATPAAEKKEATPEPEPSVKPKETVVQEATSNSDIPKAPKSEPPVPETKETSPERNSKKEREKEKEKTRQRSPTRSKSRSRSRSRSPSHSRPRRRHRSRSRSYSPRRRPSPRRRPSPRRRSPPRRLPPPPRHRRSRSPVRRRRRSSASLSGSSSSSSSSRSRSPPKKPPKRTVSSPPRKTRRMSPSASPPRRRHRPSPPASPPPKPRRSPTPQQSNRSRKSRGSVSPGRASAPKHKSTEKRESPSPAPKPRKADLSESEEDKGGKMAAADSVQQRRQYRRQNQQSSSDSGSSSSSEEERPKRSNVKNGEVGRRRRHSHSRSPSPSPRKRQKESSPRRRRRSPSPPPARRRRSPSPAPPPRRRRSPSLPRRRSPSPPPRRRSPSPRRYSPPIQRRYSPSPPPKRRTASPPPPKRRASPSPQSKRRVSHSPPPKQRSSPAAKRRSPSISSKHRKGSPPSRSNREARSPPQNKRHSPSPRPRASHTSASPPPLRRGASASPQRRQSPSPSTRPIRRVSRTPEPKKTKASTPSPRSARRVSSSRSASGSPEPAPKKHQGPPSPARSRSPSGNWSPAKKAKSPTQSPSPARNSDQEGGGKKKKKKKDKKHKKDKKHKKHKKHKKEKAAAATAAAAVAAADTTSAQEEQEAETEPKKETESEPEDNLDDLEKHLREKALRSMRKAQVSPPS
SIO_010081: SRRM1
subclass of: SO_0000673
so part of: SRRM1
location: complement(join(333912..334016,334234..334428,335192..335378,336327..336785,337124..337228,339298..339442,340045..340131,340472..340552,340699..340970,342483..342602,343155..343358,343851..344051,344481..344593,344808..344978,347050..347172,348657..348746,350864..350884))
location: region:333912-350884:-1
so has part: feature:350864-350884:-1:exon
so has part: feature:348657-348746:-1:exon
so has part: feature:347050-347172:-1:exon
so has part: feature:344808-344978:-1:exon
so has part: feature:344481-344593:-1:exon
so has part: feature:343851-344051:-1:exon
so has part: feature:343155-343358:-1:exon
so has part: feature:342483-342602:-1:exon
so has part: feature:340699-340970:-1:exon
so has part: feature:340472-340552:-1:exon
so has part: feature:340045-340131:-1:exon
so has part: feature:339298-339442:-1:exon
so has part: feature:337124-337228:-1:exon
so has part: feature:336327-336785:-1:exon
so has part: feature:335192-335378:-1:exon
so has part: feature:334234-334428:-1:exon
so has part: feature:333912-334016:-1:exon

XP_038023210.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:350864-350884:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:348657-348746:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:347050-347172:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:344808-344978:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:344481-344593:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:343851-344051:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:343155-343358:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:342483-342602:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:340699-340970:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:340472-340552:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:340045-340131:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:339298-339442:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:337124-337228:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:336327-336785:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:335192-335378:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:334234-334428:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:333912-334016:-1:exon

SRRM1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8839
gene: SRRM1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: serine/arginine repetitive matrix protein 1 isoform X2
translation: MDAGFFRGTSAEQDNRFSNKQKKLLKQLKFAECLEKKVDMSKVNLEVIKPWITKRVTEILGFEDDVVIEFIFNQLEVKNPDSKMMQINLTGFLNGKNAREFMGELWPLLLSAQENIAGIPTAFLELKKEEIKQRQIEQEKLASMKKQDEDKEKRDKEDKDNREKRDRSRSPRRRKSRSPSPRRRSSPVRRERKRSHSRSPHHRTKSRSATPAAEKKEATPEPEPSVKPKETVVQEATSNSDIPKAPKSEPPVPETKETSPERNSKKEREKEKEKTRQRSPTRSKSRSRSRSRSPSHSRPRRRHRSRSRSYSPRRRPSPRRRPSPRRRSPPRRLPPPPRHRRSRSPVRRRRRSSASLSGSSSSSSSSRSRSPPKKPPKRTVSSPPRKTRRMSPSASPPRRRHRPSPPASPPPKPRRSPTPQQSNRSRKSRGSVSPGRASAPKHKSTEKRESPSPAPKPRKADLSESEEDKGGKMAAADSVQQRRQYRRQNQQSSSDSGSSSSSEEERPKRSNVKNGEVGRRRRHSHSRSPSPSPRKRQKESSPRMQMEKRWQSPVMKRRRRSPSPPPARRRRSPSPAPPPRRRRSPSLPRRRSPSPPPRRRSPSPRRYSPPIQRRYSPSPPPKRRTASPPPPKRRASPSPQSKRRVSHSPPPKQRSSPAAKRRSPSISSKHRKGSPPSRSNREARSPPQNKRHSPSPRPRASHTSASPPPLRRGASASPQRRQSPSPSTRPIRRVSRTPEPKKTKASTPSPRSARRVSSSRSASGSPEPAPKKHQGPPSPARSRSPSGNWSPAKKAKSPTQSPSPARNSDQEGGGKKKKKKKDKKHKKDKKHKKHKKHKKEKAAAATAAAAVAAADTTSAQEEQEAETEPKKETESEPEDNLDDLEKHLREKALRSMRKAQVSPPS
SIO_010081: SRRM1
subclass of: SO_0000673
so part of: SRRM1
location: complement(join(333912..334016,334234..334428,335192..335378,336327..336785,337124..337225,338690..338731,339298..339442,340045..340131,340472..340552,340699..340970,342483..342602,343155..343358,343851..344051,344481..344593,344808..344978,347050..347172,348657..348746,350864..350884))
location: region:333912-350884:-1
so has part: feature:350864-350884:-1:exon
so has part: feature:348657-348746:-1:exon
so has part: feature:347050-347172:-1:exon
so has part: feature:344808-344978:-1:exon
so has part: feature:344481-344593:-1:exon
so has part: feature:343851-344051:-1:exon
so has part: feature:343155-343358:-1:exon
so has part: feature:342483-342602:-1:exon
so has part: feature:340699-340970:-1:exon
so has part: feature:340472-340552:-1:exon
so has part: feature:340045-340131:-1:exon
so has part: feature:339298-339442:-1:exon
so has part: feature:338690-338731:-1:exon
so has part: feature:337124-337225:-1:exon
so has part: feature:336327-336785:-1:exon
so has part: feature:335192-335378:-1:exon
so has part: feature:334234-334428:-1:exon
so has part: feature:333912-334016:-1:exon

XP_038023207.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:350864-350884:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:348657-348746:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:347050-347172:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:344808-344978:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:344481-344593:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:343851-344051:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:343155-343358:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:342483-342602:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:340699-340970:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:340472-340552:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:340045-340131:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:339298-339442:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:338690-338731:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:337124-337225:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:336327-336785:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:335192-335378:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:334234-334428:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:333912-334016:-1:exon

SRRM1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8839
gene: SRRM1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: serine/arginine repetitive matrix protein 1 isoform X1
translation: MDAGFFRGTSAEQDNRFSNKQKKLLKQLKFAECLEKKVDMSKVNLEVIKPWITKRVTEILGFEDDVVIEFIFNQLEVKNPDSKMMQINLTGFLNGKNAREFMGELWPLLLSAQENIAGIPTAFLELKKEEIKQRQIEQEKLASMKKQDEDKEKRDKEDKDNREKRDRSRSPRRRKSRSPSPRRRSSPVRRERKRSHSRSPHHRTKSRSATPAAEKKEATPEPEPSVKPKETVVQEATSNSDIPKAPKSEPPVPETKETSPERNSKKEREKEKEKTRQRSPTRSKSRSRSRSRSPSHSRPRRRHRSRSRSYSPRRRPSPRRRPSPRRRSPPRRLPPPPRHRRSRSPVRRRRRSSASLSGSSSSSSSSRSRSPPKKPPKRTVSSPPRKTRRMSPSASPPRRRHRPSPPASPPPKPRRSPTPQQSNRSRKSRGSVSPGRASAPKHKSTEKRESPSPAPKPRKADLSESEEDKGGKMAAADSVQQRRQYRRQNQQSSSDSGSSSSSEEERPKRSNVKNGEVGRRRRHSHSRSPSPSPRKRQKESSPRMQMEKRWQSPVMKSRRRRSPSPPPARRRRSPSPAPPPRRRRSPSLPRRRSPSPPPRRRSPSPRRYSPPIQRRYSPSPPPKRRTASPPPPKRRASPSPQSKRRVSHSPPPKQRSSPAAKRRSPSISSKHRKGSPPSRSNREARSPPQNKRHSPSPRPRASHTSASPPPLRRGASASPQRRQSPSPSTRPIRRVSRTPEPKKTKASTPSPRSARRVSSSRSASGSPEPAPKKHQGPPSPARSRSPSGNWSPAKKAKSPTQSPSPARNSDQEGGGKKKKKKKDKKHKKDKKHKKHKKHKKEKAAAATAAAAVAAADTTSAQEEQEAETEPKKETESEPEDNLDDLEKHLREKALRSMRKAQVSPPS
SIO_010081: SRRM1
subclass of: SO_0000673
so part of: SRRM1
location: complement(join(333912..334016,334234..334428,335192..335378,336327..336785,337124..337228,338690..338731,339298..339442,340045..340131,340472..340552,340699..340970,342483..342602,343155..343358,343851..344051,344481..344593,344808..344978,347050..347172,348657..348746,350864..350884))
location: region:333912-350884:-1
so has part: feature:350864-350884:-1:exon
so has part: feature:348657-348746:-1:exon
so has part: feature:347050-347172:-1:exon
so has part: feature:344808-344978:-1:exon
so has part: feature:344481-344593:-1:exon
so has part: feature:343851-344051:-1:exon
so has part: feature:343155-343358:-1:exon
so has part: feature:342483-342602:-1:exon
so has part: feature:340699-340970:-1:exon
so has part: feature:340472-340552:-1:exon
so has part: feature:340045-340131:-1:exon
so has part: feature:339298-339442:-1:exon
so has part: feature:338690-338731:-1:exon
so has part: feature:337124-337228:-1:exon
so has part: feature:336327-336785:-1:exon
so has part: feature:335192-335378:-1:exon
so has part: feature:334234-334428:-1:exon
so has part: feature:333912-334016:-1:exon

XP_038023206.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:350864-350884:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:348657-348746:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:347050-347172:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:344808-344978:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:344481-344593:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:343851-344051:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:343155-343358:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:342483-342602:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:340699-340970:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:340472-340552:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:340045-340131:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:339298-339442:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:338690-338731:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:337124-337228:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:336327-336785:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:335192-335378:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:334234-334428:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:333912-334016:-1:exon

SRRM1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8839
gene: SRRM1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: serine/arginine repetitive matrix protein 1 isoform X8
translation: MMQINLTGFLNGKNAREFMGELWPLLLSAQENIAGIPTAFLELKKEEIKQRQIEQEKLASMKKQDEDKEKRDKEDKDNREKRDRSRSPRRRKSRSPSPRRRSSPVRRERKRSHSRSPHHRTKSRSATPAAEKKEATPEPEPSVKPKETVVQEATSNSDIPKAPKSEPPVPETKETSPERNSKKEREKEKEKTRQRSPTRSKSRSRSRSRSPSHSRPRRRHRSRSRSYSPRRRPSPRRRPSPRRRSPPRRLPPPPRHRRSRSPVRRRRRSSASLSGSSSSSSSSRSRSPPKKPPKRTVSSPPRKTRRMSPSASPPRRRHRPSPPASPPPKPRRSPTPQQSNRSRKSRGSVSPGRASAPKHKSTEKRESPSPAPKPRKADLSESEEDKGGKMAAADSVQQRRQYRRQNQQSSSDSGSSSSSEEERPKRSNVKNGEVGRRRRHSHSRSPSPSPRKRQKESSPRMQMEKRWQSPVMKSRRRRSPSPPPARRRRSPSPAPPPRRRRSPSLPRRRSPSPPPRRRSPSPRRYSPPIQRRYSPSPPPKRRTASPPPPKRRASPSPQSKRRVSHSPPPKQRSSPAAKRRSPSISSKHRKGSPPSRSNREARSPPQNKRHSPSPRPRASHTSASPPPLRRGASASPQRRQSPSPSTRPIRRVSRTPEPKKTKASTPSPRSARRVSSSRSASGSPEPAPKKHQGPPSPARSRSPSGNWSPAKKAKSPTQSPSPARNSDQEGGGKKKKKKKDKKHKKDKKHKKHKKHKKEKAAAATAAAAVAAADTTSAQEEQEAETEPKKETESEPEDNLDDLEKHLREKALRSMRKAQVSPPS
SIO_010081: SRRM1
subclass of: SO_0000673
so part of: SRRM1
location: complement(join(333912..334016,334234..334428,335192..335378,336327..336785,337124..337228,338690..338731,339298..339442,340045..340131,340472..340552,340699..340970,342483..342602,343155..343358,343851..344051,344481..344593,344808..344963))
location: region:333912-344963:-1
so has part: feature:344808-344963:-1:exon
so has part: feature:344481-344593:-1:exon
so has part: feature:343851-344051:-1:exon
so has part: feature:343155-343358:-1:exon
so has part: feature:342483-342602:-1:exon
so has part: feature:340699-340970:-1:exon
so has part: feature:340472-340552:-1:exon
so has part: feature:340045-340131:-1:exon
so has part: feature:339298-339442:-1:exon
so has part: feature:338690-338731:-1:exon
so has part: feature:337124-337228:-1:exon
so has part: feature:336327-336785:-1:exon
so has part: feature:335192-335378:-1:exon
so has part: feature:334234-334428:-1:exon
so has part: feature:333912-334016:-1:exon

XP_038023214.1
type: Protein
SIO_000068: ncbiprotein

position:344963:-1
position: 344963
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:344808-344963:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:344481-344593:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:343851-344051:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:343155-343358:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:342483-342602:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:340699-340970:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:340472-340552:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:340045-340131:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:339298-339442:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:338690-338731:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:337124-337228:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:336327-336785:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:335192-335378:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:334234-334428:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:333912-334016:-1:exon

LOC119713613
type: Gene
subclass of: SO_0000704
RO_0002162: 8839
gene: LOC119713613
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(345097..365519)
location: region:345097-365519:-1
so has part: feature:345097-365519:-1:exon
subclass of: SO_0000010

119713613
type: Gene
SIO_000068: ncbigene

position:345097:-1
position: 345097
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:365519:-1
position: 365519
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:345097-365519:-1:exon

LOC119713613
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8839
gene: LOC119713613
product: non-compact myelin associated protein, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
transcript id: XM_038167288.1
SIO_010081: LOC119713613
subclass of: SO_0000673
so part of: LOC119713613
location: complement(join(345097..346180,346637..346765,347050..347172,348657..348746,350864..354275,354421..354505,354916..355010,359723..359792,365141..365519))
location: region:345097-365519:-1
so has part: feature:365141-365519:-1:exon
so has part: feature:359723-359792:-1:exon
so has part: feature:354916-355010:-1:exon
so has part: feature:354421-354505:-1:exon
so has part: feature:350864-354275:-1:exon
so has part: feature:348657-348746:-1:exon
so has part: feature:347050-347172:-1:exon
so has part: feature:346637-346765:-1:exon
so has part: feature:345097-346180:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:365141-365519:-1:exon

position:365141:-1
position: 365141
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:359723-359792:-1:exon

position:359723:-1
position: 359723
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:359792:-1
position: 359792
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:354916-355010:-1:exon

position:354916:-1
position: 354916
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:355010:-1
position: 355010
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:354421-354505:-1:exon

position:354421:-1
position: 354421
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:354505:-1
position: 354505
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:350864-354275:-1:exon

position:354275:-1
position: 354275
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:348657-348746:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:347050-347172:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:346637-346765:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:345097-346180:-1:exon

position:346180:-1
position: 346180
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC119713613
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8839
gene: LOC119713613
product: non-compact myelin associated protein, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 6 samples with support for all annotated introns
transcript id: XM_038167287.1
SIO_010081: LOC119713613
subclass of: SO_0000673
so part of: LOC119713613
location: complement(join(345097..346180,346637..346765,347050..347172,348657..348746,350864..354275,354421..354505,354916..355010,359723..359792,364353..364538,365141..365519))
location: region:345097-365519:-1
so has part: feature:365141-365519:-1:exon
so has part: feature:364353-364538:-1:exon
so has part: feature:359723-359792:-1:exon
so has part: feature:354916-355010:-1:exon
so has part: feature:354421-354505:-1:exon
so has part: feature:350864-354275:-1:exon
so has part: feature:348657-348746:-1:exon
so has part: feature:347050-347172:-1:exon
so has part: feature:346637-346765:-1:exon
so has part: feature:345097-346180:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:365141-365519:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:364353-364538:-1:exon

position:364353:-1
position: 364353
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:364538:-1
position: 364538
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:359723-359792:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:354916-355010:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:354421-354505:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:350864-354275:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:348657-348746:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:347050-347172:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:346637-346765:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:345097-346180:-1:exon

LOC119713613
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8839
gene: LOC119713613
product: non-compact myelin associated protein, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 17 samples with support for all annotated introns
transcript id: XM_038167290.1
SIO_010081: LOC119713613
subclass of: SO_0000673
so part of: LOC119713613
location: complement(join(345097..346180,346637..346765,347050..347172,348657..348746,350864..354275,354421..354505,354916..355010,365141..365516))
location: region:345097-365516:-1
so has part: feature:365141-365516:-1:exon
so has part: feature:354916-355010:-1:exon
so has part: feature:354421-354505:-1:exon
so has part: feature:350864-354275:-1:exon
so has part: feature:348657-348746:-1:exon
so has part: feature:347050-347172:-1:exon
so has part: feature:346637-346765:-1:exon
so has part: feature:345097-346180:-1:exon

position:365516:-1
position: 365516
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:365141-365516:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:354916-355010:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:354421-354505:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:350864-354275:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:348657-348746:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:347050-347172:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:346637-346765:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:345097-346180:-1:exon

LOC119713613
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8839
gene: LOC119713613
product: non-compact myelin associated protein, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 18 samples with support for all annotated introns
transcript id: XM_038167289.1
SIO_010081: LOC119713613
subclass of: SO_0000673
so part of: LOC119713613
location: complement(join(345097..346180,346637..346765,347050..347172,348657..348746,350864..354275,354421..354505,354916..355010,364353..364538,365141..365516))
location: region:345097-365516:-1
so has part: feature:365141-365516:-1:exon
so has part: feature:364353-364538:-1:exon
so has part: feature:354916-355010:-1:exon
so has part: feature:354421-354505:-1:exon
so has part: feature:350864-354275:-1:exon
so has part: feature:348657-348746:-1:exon
so has part: feature:347050-347172:-1:exon
so has part: feature:346637-346765:-1:exon
so has part: feature:345097-346180:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:365141-365516:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:364353-364538:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:354916-355010:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:354421-354505:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:350864-354275:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:348657-348746:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:347050-347172:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:346637-346765:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:345097-346180:-1:exon

LOC119713613
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8839
gene: LOC119713613
product: non-compact myelin associated protein, transcript variant X6
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XM_038167292.1
SIO_010081: LOC119713613
subclass of: SO_0000673
so part of: LOC119713613
location: complement(join(345097..346180,346637..346765,347050..347172,348657..348746,350864..354275,354421..354505,354916..355010,362867..364324))
location: region:345097-364324:-1
so has part: feature:362867-364324:-1:exon
so has part: feature:354916-355010:-1:exon
so has part: feature:354421-354505:-1:exon
so has part: feature:350864-354275:-1:exon
so has part: feature:348657-348746:-1:exon
so has part: feature:347050-347172:-1:exon
so has part: feature:346637-346765:-1:exon
so has part: feature:345097-346180:-1:exon

position:364324:-1
position: 364324
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:362867-364324:-1:exon

position:362867:-1
position: 362867
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:354916-355010:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:354421-354505:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:350864-354275:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:348657-348746:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:347050-347172:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:346637-346765:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:345097-346180:-1:exon

LOC119713613
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8839
gene: LOC119713613
product: non-compact myelin associated protein, transcript variant X5
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XM_038167291.1
SIO_010081: LOC119713613
subclass of: SO_0000673
so part of: LOC119713613
location: complement(join(345097..346180,346637..346765,347050..347172,348657..348746,350864..354275,354421..354505,354916..355010,362271..362801))
location: region:345097-362801:-1
so has part: feature:362271-362801:-1:exon
so has part: feature:354916-355010:-1:exon
so has part: feature:354421-354505:-1:exon
so has part: feature:350864-354275:-1:exon
so has part: feature:348657-348746:-1:exon
so has part: feature:347050-347172:-1:exon
so has part: feature:346637-346765:-1:exon
so has part: feature:345097-346180:-1:exon

position:362801:-1
position: 362801
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:362271-362801:-1:exon

position:362271:-1
position: 362271
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:354916-355010:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:354421-354505:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:350864-354275:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:348657-348746:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:347050-347172:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:346637-346765:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:345097-346180:-1:exon

LOC119713613
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8839
gene: LOC119713613
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: noncompact myelin-associated protein isoform X1
translation: MPLKTSALLPGDLPSAPHFLSASPSKMTTAAPLINNTQFSLNVTTKSQEQSLYQSSGAIVAAIVVGVIIIFTVVLLILKTYNRRMRVKRELEPKSTKTAMPPALGQNSDSVTQHPVVTFIPVDIHMQSRQL
SIO_010081: LOC119713613
subclass of: SO_0000673
so part of: LOC119713613
location: complement(join(354128..354275,354421..354505,354916..355010,359723..359790))
location: region:354128-359790:-1
so has part: feature:359723-359790:-1:exon
so has part: feature:354916-355010:-1:exon
so has part: feature:354421-354505:-1:exon
so has part: feature:354128-354275:-1:exon

XP_038023215.1
type: Protein
SIO_000068: ncbiprotein

position:354128:-1
position: 354128
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:359790:-1
position: 359790
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:359723-359790:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:354916-355010:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:354421-354505:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:354128-354275:-1:exon

LOC119713613
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8839
gene: LOC119713613
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: noncompact myelin-associated protein isoform X1
translation: MPLKTSALLPGDLPSAPHFLSASPSKMTTAAPLINNTQFSLNVTTKSQEQSLYQSSGAIVAAIVVGVIIIFTVVLLILKTYNRRMRVKRELEPKSTKTAMPPALGQNSDSVTQHPVVTFIPVDIHMQSRQL
SIO_010081: LOC119713613
subclass of: SO_0000673
so part of: LOC119713613
location: complement(join(354128..354275,354421..354505,354916..355010,359723..359790))
location: region:354128-359790:-1
so has part: feature:359723-359790:-1:exon
so has part: feature:354916-355010:-1:exon
so has part: feature:354421-354505:-1:exon
so has part: feature:354128-354275:-1:exon

XP_038023216.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:359723-359790:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:354916-355010:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:354421-354505:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:354128-354275:-1:exon

LOC119713613
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8839
gene: LOC119713613
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: noncompact myelin-associated protein isoform X2
translation: MTTAAPLINNTQFSLNVTTKSQEQSLYQSSGAIVAAIVVGVIIIFTVVLLILKTYNRRMRVKRELEPKSTKTAMPPALGQNSDSVTQHPVVTFIPVDIHMQSRQL
SIO_010081: LOC119713613
subclass of: SO_0000673
so part of: LOC119713613
location: complement(join(354128..354275,354421..354505,354916..355000))
location: region:354128-355000:-1
so has part: feature:354916-355000:-1:exon
so has part: feature:354421-354505:-1:exon
so has part: feature:354128-354275:-1:exon

XP_038023217.1
type: Protein
SIO_000068: ncbiprotein

position:355000:-1
position: 355000
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:354916-355000:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:354421-354505:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:354128-354275:-1:exon

LOC119713613
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8839
gene: LOC119713613
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: noncompact myelin-associated protein isoform X2
translation: MTTAAPLINNTQFSLNVTTKSQEQSLYQSSGAIVAAIVVGVIIIFTVVLLILKTYNRRMRVKRELEPKSTKTAMPPALGQNSDSVTQHPVVTFIPVDIHMQSRQL
SIO_010081: LOC119713613
subclass of: SO_0000673
so part of: LOC119713613
location: complement(join(354128..354275,354421..354505,354916..355000))
location: region:354128-355000:-1
so has part: feature:354916-355000:-1:exon
so has part: feature:354421-354505:-1:exon
so has part: feature:354128-354275:-1:exon

XP_038023218.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:354916-355000:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:354421-354505:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:354128-354275:-1:exon

LOC119713613
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8839
gene: LOC119713613
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: noncompact myelin-associated protein isoform X2
translation: MTTAAPLINNTQFSLNVTTKSQEQSLYQSSGAIVAAIVVGVIIIFTVVLLILKTYNRRMRVKRELEPKSTKTAMPPALGQNSDSVTQHPVVTFIPVDIHMQSRQL
SIO_010081: LOC119713613
subclass of: SO_0000673
so part of: LOC119713613
location: complement(join(354128..354275,354421..354505,354916..355000))
location: region:354128-355000:-1
so has part: feature:354916-355000:-1:exon
so has part: feature:354421-354505:-1:exon
so has part: feature:354128-354275:-1:exon

XP_038023219.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:354916-355000:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:354421-354505:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:354128-354275:-1:exon

LOC119713613
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8839
gene: LOC119713613
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: noncompact myelin-associated protein isoform X2
translation: MTTAAPLINNTQFSLNVTTKSQEQSLYQSSGAIVAAIVVGVIIIFTVVLLILKTYNRRMRVKRELEPKSTKTAMPPALGQNSDSVTQHPVVTFIPVDIHMQSRQL
SIO_010081: LOC119713613
subclass of: SO_0000673
so part of: LOC119713613
location: complement(join(354128..354275,354421..354505,354916..355000))
location: region:354128-355000:-1
so has part: feature:354916-355000:-1:exon
so has part: feature:354421-354505:-1:exon
so has part: feature:354128-354275:-1:exon

XP_038023220.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:354916-355000:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:354421-354505:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:354128-354275:-1:exon

RCAN3
type: Gene
subclass of: SO_0000704
RO_0002162: 8839
gene: RCAN3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(367585..378460)
location: region:367585-378460:-1
so has part: feature:367585-378460:-1:exon
subclass of: SO_0000010

119713594
type: Gene
SIO_000068: ncbigene

position:367585:-1
position: 367585
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:378460:-1
position: 378460
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:367585-378460:-1:exon

RCAN3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8839
gene: RCAN3
product: RCAN family member 3, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 7 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 115 samples with support for all annotated introns
transcript id: XM_038167215.1
SIO_010081: RCAN3
subclass of: SO_0000673
so part of: RCAN3
location: complement(join(367585..369701,370420..370591,371153..371326,373875..374117,378314..378460))
location: region:367585-378460:-1
so has part: feature:378314-378460:-1:exon
so has part: feature:373875-374117:-1:exon
so has part: feature:371153-371326:-1:exon
so has part: feature:370420-370591:-1:exon
so has part: feature:367585-369701:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:378314-378460:-1:exon

position:378314:-1
position: 378314
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:373875-374117:-1:exon

position:373875:-1
position: 373875
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:374117:-1
position: 374117
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:371153-371326:-1:exon

position:371153:-1
position: 371153
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:371326:-1
position: 371326
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:370420-370591:-1:exon

position:370420:-1
position: 370420
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:370591:-1
position: 370591
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:367585-369701:-1:exon

position:369701:-1
position: 369701
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

RCAN3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8839
gene: RCAN3
product: RCAN family member 3, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 7 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 121 samples with support for all annotated introns
transcript id: XM_038167214.1
SIO_010081: RCAN3
subclass of: SO_0000673
so part of: RCAN3
location: complement(join(367585..369701,370420..370591,371153..371326,373875..374117,378287..378443))
location: region:367585-378443:-1
so has part: feature:378287-378443:-1:exon
so has part: feature:373875-374117:-1:exon
so has part: feature:371153-371326:-1:exon
so has part: feature:370420-370591:-1:exon
so has part: feature:367585-369701:-1:exon

position:378443:-1
position: 378443
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:378287-378443:-1:exon

position:378287:-1
position: 378287
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:373875-374117:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:371153-371326:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:370420-370591:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:367585-369701:-1:exon

RCAN3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8839
gene: RCAN3
product: RCAN family member 3, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 7 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 92 samples with support for all annotated introns
transcript id: XM_038167216.1
SIO_010081: RCAN3
subclass of: SO_0000673
so part of: RCAN3
location: complement(join(367585..369701,370420..370591,371153..371326,373875..374117,375957..376039))
location: region:367585-376039:-1
so has part: feature:375957-376039:-1:exon
so has part: feature:373875-374117:-1:exon
so has part: feature:371153-371326:-1:exon
so has part: feature:370420-370591:-1:exon
so has part: feature:367585-369701:-1:exon

position:376039:-1
position: 376039
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:375957-376039:-1:exon

position:375957:-1
position: 375957
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:373875-374117:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:371153-371326:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:370420-370591:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:367585-369701:-1:exon

RCAN3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8839
gene: RCAN3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: calcipressin-3
translation: MLRDTMKSWSDSQSDLYSSDQEEEEQMIFGENEDDLEEMMDLSDLPTSLFACSVHEAVFEVQEEKERFEALFTVYDNQVTFQSFKSFRRVRINFSNPEAAARARIELHETDFNGKKLKLYFAQVQVSSEVGDKSYLLPPQPVKQFLISPPASPPVGWKQSEDATPLINYDLLCAVSKLGPGEKYELHAGTESTPSVVVHVCESETEEEDEIKNPKQKIMQTRRPEPPATILNESKAFDCTLEVGGTMHC
SIO_010081: RCAN3
subclass of: SO_0000673
so part of: RCAN3
location: complement(join(369493..369701,370420..370591,371153..371326,373875..374069))
location: region:369493-374069:-1
so has part: feature:373875-374069:-1:exon
so has part: feature:371153-371326:-1:exon
so has part: feature:370420-370591:-1:exon
so has part: feature:369493-369701:-1:exon

XP_038023142.1
type: Protein
SIO_000068: ncbiprotein

position:369493:-1
position: 369493
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:374069:-1
position: 374069
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:373875-374069:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:371153-371326:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:370420-370591:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:369493-369701:-1:exon

RCAN3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8839
gene: RCAN3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: calcipressin-3
translation: MLRDTMKSWSDSQSDLYSSDQEEEEQMIFGENEDDLEEMMDLSDLPTSLFACSVHEAVFEVQEEKERFEALFTVYDNQVTFQSFKSFRRVRINFSNPEAAARARIELHETDFNGKKLKLYFAQVQVSSEVGDKSYLLPPQPVKQFLISPPASPPVGWKQSEDATPLINYDLLCAVSKLGPGEKYELHAGTESTPSVVVHVCESETEEEDEIKNPKQKIMQTRRPEPPATILNESKAFDCTLEVGGTMHC
SIO_010081: RCAN3
subclass of: SO_0000673
so part of: RCAN3
location: complement(join(369493..369701,370420..370591,371153..371326,373875..374069))
location: region:369493-374069:-1
so has part: feature:373875-374069:-1:exon
so has part: feature:371153-371326:-1:exon
so has part: feature:370420-370591:-1:exon
so has part: feature:369493-369701:-1:exon

XP_038023143.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:373875-374069:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:371153-371326:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:370420-370591:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:369493-369701:-1:exon

RCAN3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8839
gene: RCAN3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: calcipressin-3
translation: MLRDTMKSWSDSQSDLYSSDQEEEEQMIFGENEDDLEEMMDLSDLPTSLFACSVHEAVFEVQEEKERFEALFTVYDNQVTFQSFKSFRRVRINFSNPEAAARARIELHETDFNGKKLKLYFAQVQVSSEVGDKSYLLPPQPVKQFLISPPASPPVGWKQSEDATPLINYDLLCAVSKLGPGEKYELHAGTESTPSVVVHVCESETEEEDEIKNPKQKIMQTRRPEPPATILNESKAFDCTLEVGGTMHC
SIO_010081: RCAN3
subclass of: SO_0000673
so part of: RCAN3
location: complement(join(369493..369701,370420..370591,371153..371326,373875..374069))
location: region:369493-374069:-1
so has part: feature:373875-374069:-1:exon
so has part: feature:371153-371326:-1:exon
so has part: feature:370420-370591:-1:exon
so has part: feature:369493-369701:-1:exon

XP_038023144.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:373875-374069:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:371153-371326:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:370420-370591:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:369493-369701:-1:exon

NIPAL3
type: Gene
subclass of: SO_0000704
RO_0002162: 8839
gene: NIPAL3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(379542..392531)
location: region:379542-392531:-1
so has part: feature:379542-392531:-1:exon
subclass of: SO_0000010

119713592
type: Gene
SIO_000068: ncbigene

position:379542:-1
position: 379542
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:392531:-1
position: 392531
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:379542-392531:-1:exon

NIPAL3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8839
gene: NIPAL3
product: NIPA like domain containing 3, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 118 samples with support for all annotated introns
transcript id: XM_038167209.1
SIO_010081: NIPAL3
subclass of: SO_0000673
so part of: NIPAL3
location: complement(join(379542..383132,383793..383887,384960..385023,386239..386327,386985..387120,387356..387452,388204..388325,389046..389105,389214..389385,389484..389552,391454..391859,392371..392531))
location: region:379542-392531:-1
so has part: feature:392371-392531:-1:exon
so has part: feature:391454-391859:-1:exon
so has part: feature:389484-389552:-1:exon
so has part: feature:389214-389385:-1:exon
so has part: feature:389046-389105:-1:exon
so has part: feature:388204-388325:-1:exon
so has part: feature:387356-387452:-1:exon
so has part: feature:386985-387120:-1:exon
so has part: feature:386239-386327:-1:exon
so has part: feature:384960-385023:-1:exon
so has part: feature:383793-383887:-1:exon
so has part: feature:379542-383132:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:392371-392531:-1:exon

position:392371:-1
position: 392371
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:391454-391859:-1:exon

position:391454:-1
position: 391454
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:391859:-1
position: 391859
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:389484-389552:-1:exon

position:389484:-1
position: 389484
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:389552:-1
position: 389552
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:389214-389385:-1:exon

position:389214:-1
position: 389214
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:389385:-1
position: 389385
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:389046-389105:-1:exon

position:389046:-1
position: 389046
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:389105:-1
position: 389105
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:388204-388325:-1:exon

position:388204:-1
position: 388204
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:388325:-1
position: 388325
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:387356-387452:-1:exon

position:387356:-1
position: 387356
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:387452:-1
position: 387452
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:386985-387120:-1:exon

position:386985:-1
position: 386985
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:387120:-1
position: 387120
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:386239-386327:-1:exon

position:386239:-1
position: 386239
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:386327:-1
position: 386327
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:384960-385023:-1:exon

position:384960:-1
position: 384960
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:385023:-1
position: 385023
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:383793-383887:-1:exon

position:383793:-1
position: 383793
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:383887:-1
position: 383887
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:379542-383132:-1:exon

position:383132:-1
position: 383132
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

NIPAL3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8839
gene: NIPAL3
product: NIPA like domain containing 3, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 13 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 124 samples with support for all annotated introns
transcript id: XM_038167207.1
SIO_010081: NIPAL3
subclass of: SO_0000673
so part of: NIPAL3
location: complement(join(379542..383132,383793..383887,384960..385023,386239..386327,386985..387120,387356..387452,388204..388349,389046..389105,389214..389385,389484..389552,391454..391859,392371..392531))
location: region:379542-392531:-1
so has part: feature:392371-392531:-1:exon
so has part: feature:391454-391859:-1:exon
so has part: feature:389484-389552:-1:exon
so has part: feature:389214-389385:-1:exon
so has part: feature:389046-389105:-1:exon
so has part: feature:388204-388349:-1:exon
so has part: feature:387356-387452:-1:exon
so has part: feature:386985-387120:-1:exon
so has part: feature:386239-386327:-1:exon
so has part: feature:384960-385023:-1:exon
so has part: feature:383793-383887:-1:exon
so has part: feature:379542-383132:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:392371-392531:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:391454-391859:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:389484-389552:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:389214-389385:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:389046-389105:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:388204-388349:-1:exon

position:388349:-1
position: 388349
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:387356-387452:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:386985-387120:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:386239-386327:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:384960-385023:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:383793-383887:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:379542-383132:-1:exon

NIPAL3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8839
gene: NIPAL3
product: NIPA like domain containing 3, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 13 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 48 samples with support for all annotated introns
transcript id: XM_038167208.1
SIO_010081: NIPAL3
subclass of: SO_0000673
so part of: NIPAL3
location: complement(join(379542..383132,383793..383887,384960..385023,386239..386327,386985..387120,387356..387452,388204..388349,389046..389105,389214..389385,389484..389552,391454..391859,392110..392250))
location: region:379542-392250:-1
so has part: feature:392110-392250:-1:exon
so has part: feature:391454-391859:-1:exon
so has part: feature:389484-389552:-1:exon
so has part: feature:389214-389385:-1:exon
so has part: feature:389046-389105:-1:exon
so has part: feature:388204-388349:-1:exon
so has part: feature:387356-387452:-1:exon
so has part: feature:386985-387120:-1:exon
so has part: feature:386239-386327:-1:exon
so has part: feature:384960-385023:-1:exon
so has part: feature:383793-383887:-1:exon
so has part: feature:379542-383132:-1:exon

position:392250:-1
position: 392250
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:392110-392250:-1:exon

position:392110:-1
position: 392110
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:391454-391859:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:389484-389552:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:389214-389385:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:389046-389105:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:388204-388349:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:387356-387452:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:386985-387120:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:386239-386327:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:384960-385023:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:383793-383887:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:379542-383132:-1:exon

NIPAL3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8839
gene: NIPAL3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: NIPA-like protein 3 isoform X2
translation: MEGGNSPNLQLQQLPLATAAVSVQPHTDSFSYKENLIGALLAIFGHLVISIALNLQKYSHIRLAGSKDPRAYFKTKTWWCGLFLLVLGELGVFSSYAFAPLSLIVPLSAVSVIASAIIGIIFIKEKWKPKDFLSCGLAIIGTYLLITFGPNSHEKMTGENITRHLVSWPFLLYMLLEIIIFCLLLYFYKEKNANYIVVILLLVALLGSMTVVTVKAVAGMIVVSIQGNLQLDYPIFYIMLVCMIATAVFQATFLAQASQLYDSSQIASIGYILSTTIAITAGATFYLDFTGEDVLHICMFALGCLIAFLGVFLITRNRKKSVPFEPYISMDAMPGMQNVHDKGIAVQPDLKASFSYGALENNDNMPEIYTPATLPIVQEQHGSRGVSAPPYRVLEHSKKE
SIO_010081: NIPAL3
subclass of: SO_0000673
so part of: NIPAL3
location: complement(join(382933..383132,383793..383887,384960..385023,386239..386327,386985..387120,387356..387452,388204..388325,389046..389105,389214..389385,389484..389552,391454..391552))
location: region:382933-391552:-1
so has part: feature:391454-391552:-1:exon
so has part: feature:389484-389552:-1:exon
so has part: feature:389214-389385:-1:exon
so has part: feature:389046-389105:-1:exon
so has part: feature:388204-388325:-1:exon
so has part: feature:387356-387452:-1:exon
so has part: feature:386985-387120:-1:exon
so has part: feature:386239-386327:-1:exon
so has part: feature:384960-385023:-1:exon
so has part: feature:383793-383887:-1:exon
so has part: feature:382933-383132:-1:exon

XP_038023137.1
type: Protein
SIO_000068: ncbiprotein

position:382933:-1
position: 382933
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:391552:-1
position: 391552
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:391454-391552:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:389484-389552:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:389214-389385:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:389046-389105:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:388204-388325:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:387356-387452:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:386985-387120:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:386239-386327:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:384960-385023:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:383793-383887:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:382933-383132:-1:exon

NIPAL3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8839
gene: NIPAL3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: NIPA-like protein 3 isoform X1
translation: MEGGNSPNLQLQQLPLATAAVSVQPHTDSFSYKENLIGALLAIFGHLVISIALNLQKYSHIRLAGSKDPRAYFKTKTWWCGLFLLVLGELGVFSSYAFAPLSLIVPLSAVSVIASAIIGIIFIKEKWKPKDFLRRYVLSFVGCGLAIIGTYLLITFGPNSHEKMTGENITRHLVSWPFLLYMLLEIIIFCLLLYFYKEKNANYIVVILLLVALLGSMTVVTVKAVAGMIVVSIQGNLQLDYPIFYIMLVCMIATAVFQATFLAQASQLYDSSQIASIGYILSTTIAITAGATFYLDFTGEDVLHICMFALGCLIAFLGVFLITRNRKKSVPFEPYISMDAMPGMQNVHDKGIAVQPDLKASFSYGALENNDNMPEIYTPATLPIVQEQHGSRGVSAPPYRVLEHSKKE
SIO_010081: NIPAL3
subclass of: SO_0000673
so part of: NIPAL3
location: complement(join(382933..383132,383793..383887,384960..385023,386239..386327,386985..387120,387356..387452,388204..388349,389046..389105,389214..389385,389484..389552,391454..391552))
location: region:382933-391552:-1
so has part: feature:391454-391552:-1:exon
so has part: feature:389484-389552:-1:exon
so has part: feature:389214-389385:-1:exon
so has part: feature:389046-389105:-1:exon
so has part: feature:388204-388349:-1:exon
so has part: feature:387356-387452:-1:exon
so has part: feature:386985-387120:-1:exon
so has part: feature:386239-386327:-1:exon
so has part: feature:384960-385023:-1:exon
so has part: feature:383793-383887:-1:exon
so has part: feature:382933-383132:-1:exon

XP_038023135.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:391454-391552:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:389484-389552:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:389214-389385:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:389046-389105:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:388204-388349:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:387356-387452:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:386985-387120:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:386239-386327:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:384960-385023:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:383793-383887:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:382933-383132:-1:exon

NIPAL3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8839
gene: NIPAL3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: NIPA-like protein 3 isoform X1
translation: MEGGNSPNLQLQQLPLATAAVSVQPHTDSFSYKENLIGALLAIFGHLVISIALNLQKYSHIRLAGSKDPRAYFKTKTWWCGLFLLVLGELGVFSSYAFAPLSLIVPLSAVSVIASAIIGIIFIKEKWKPKDFLRRYVLSFVGCGLAIIGTYLLITFGPNSHEKMTGENITRHLVSWPFLLYMLLEIIIFCLLLYFYKEKNANYIVVILLLVALLGSMTVVTVKAVAGMIVVSIQGNLQLDYPIFYIMLVCMIATAVFQATFLAQASQLYDSSQIASIGYILSTTIAITAGATFYLDFTGEDVLHICMFALGCLIAFLGVFLITRNRKKSVPFEPYISMDAMPGMQNVHDKGIAVQPDLKASFSYGALENNDNMPEIYTPATLPIVQEQHGSRGVSAPPYRVLEHSKKE
SIO_010081: NIPAL3
subclass of: SO_0000673
so part of: NIPAL3
location: complement(join(382933..383132,383793..383887,384960..385023,386239..386327,386985..387120,387356..387452,388204..388349,389046..389105,389214..389385,389484..389552,391454..391552))
location: region:382933-391552:-1
so has part: feature:391454-391552:-1:exon
so has part: feature:389484-389552:-1:exon
so has part: feature:389214-389385:-1:exon
so has part: feature:389046-389105:-1:exon
so has part: feature:388204-388349:-1:exon
so has part: feature:387356-387452:-1:exon
so has part: feature:386985-387120:-1:exon
so has part: feature:386239-386327:-1:exon
so has part: feature:384960-385023:-1:exon
so has part: feature:383793-383887:-1:exon
so has part: feature:382933-383132:-1:exon

XP_038023136.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:391454-391552:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:389484-389552:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:389214-389385:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:389046-389105:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:388204-388349:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:387356-387452:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:386985-387120:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:386239-386327:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:384960-385023:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:383793-383887:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:382933-383132:-1:exon

STPG1
type: Gene
subclass of: SO_0000704
RO_0002162: 8839
gene: STPG1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 392701..405301
location: region:392701-405301:1
so has part: feature:392701-405301:1:exon
subclass of: SO_0000010

119713593
type: Gene
SIO_000068: ncbigene

position:392701:1
position: 392701
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:405301:1
position: 405301
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:392701-405301:1:exon

STPG1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8839
gene: STPG1
product: sperm tail PG-rich repeat containing 1, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 12 samples with support for all annotated introns
transcript id: XM_038167210.1
SIO_010081: STPG1
subclass of: SO_0000673
so part of: STPG1
location: join(392701..392731,393539..393642,395826..395927,396706..396879,399566..399677,400375..400540,401986..402176,405018..405301)
location: region:392701-405301:1
so has part: feature:392701-392731:1:exon
so has part: feature:393539-393642:1:exon
so has part: feature:395826-395927:1:exon
so has part: feature:396706-396879:1:exon
so has part: feature:399566-399677:1:exon
so has part: feature:400375-400540:1:exon
so has part: feature:401986-402176:1:exon
so has part: feature:405018-405301:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:392701-392731:1:exon

position:392731:1
position: 392731
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:393539-393642:1:exon

position:393539:1
position: 393539
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:393642:1
position: 393642
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:395826-395927:1:exon

position:395826:1
position: 395826
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:395927:1
position: 395927
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:396706-396879:1:exon

position:396706:1
position: 396706
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:396879:1
position: 396879
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:399566-399677:1:exon

position:399566:1
position: 399566
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:399677:1
position: 399677
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:400375-400540:1:exon

position:400375:1
position: 400375
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:400540:1
position: 400540
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:401986-402176:1:exon

position:401986:1
position: 401986
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:402176:1
position: 402176
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:405018-405301:1:exon

position:405018:1
position: 405018
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

STPG1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8839
gene: STPG1
product: sperm tail PG-rich repeat containing 1, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 11 samples with support for all annotated introns
transcript id: XM_038167212.1
SIO_010081: STPG1
subclass of: SO_0000673
so part of: STPG1
location: join(392701..392731,393539..393642,396706..396879,399566..399677,400375..400540,401986..402176,405018..405301)
location: region:392701-405301:1
so has part: feature:392701-392731:1:exon
so has part: feature:393539-393642:1:exon
so has part: feature:396706-396879:1:exon
so has part: feature:399566-399677:1:exon
so has part: feature:400375-400540:1:exon
so has part: feature:401986-402176:1:exon
so has part: feature:405018-405301:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:392701-392731:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:393539-393642:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:396706-396879:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:399566-399677:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:400375-400540:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:401986-402176:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:405018-405301:1:exon

STPG1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8839
gene: STPG1
product: sperm tail PG-rich repeat containing 1, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
transcript id: XM_038167211.1
SIO_010081: STPG1
subclass of: SO_0000673
so part of: STPG1
location: join(392701..392731,393539..393642,395826..395927,396706..396879,399566..399677,400375..400540,401986..402176,402268..403316)
location: region:392701-403316:1
so has part: feature:392701-392731:1:exon
so has part: feature:393539-393642:1:exon
so has part: feature:395826-395927:1:exon
so has part: feature:396706-396879:1:exon
so has part: feature:399566-399677:1:exon
so has part: feature:400375-400540:1:exon
so has part: feature:401986-402176:1:exon
so has part: feature:402268-403316:1:exon

position:403316:1
position: 403316
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:392701-392731:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:393539-393642:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:395826-395927:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:396706-396879:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:399566-399677:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:400375-400540:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:401986-402176:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:402268-403316:1:exon

position:402268:1
position: 402268
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

STPG1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8839
gene: STPG1
product: sperm tail PG-rich repeat containing 1, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
transcript id: XM_038167213.1
SIO_010081: STPG1
subclass of: SO_0000673
so part of: STPG1
location: join(392701..392731,393539..393642,395826..395927,396706..396879,399566..399677,400375..400540,401848..401985)
location: region:392701-401985:1
so has part: feature:392701-392731:1:exon
so has part: feature:393539-393642:1:exon
so has part: feature:395826-395927:1:exon
so has part: feature:396706-396879:1:exon
so has part: feature:399566-399677:1:exon
so has part: feature:400375-400540:1:exon
so has part: feature:401848-401985:1:exon

position:401985:1
position: 401985
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:392701-392731:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:393539-393642:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:395826-395927:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:396706-396879:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:399566-399677:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:400375-400540:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:401848-401985:1:exon

position:401848:1
position: 401848
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

STPG1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8839
gene: STPG1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: O(6)-methylguanine-induced apoptosis 2 isoform X1
translation: MGGARGFQISSSPYKHHGKVISDSEKNGFNSQSKRFQYNQSENPGPGFYNVTHQSPEINSPSLSKKGTGYFPSLVPRTAHKKISSFPAANAYNILSHFQSRRDFSMGNSSVFQQPISRKTEKIPTPAPNQYHTSTDFCKQSNNVSAHAVFVSRTTRGLNLEKIGKWPSPCHYNINDSLTKVSPKGITSCFKSKTSHLTRTDRITAEPTIYQPYKPTRETKKTPFKQKFCLTLCAPAIPPCKDPPFPGPGQYNLVDYGGSLKQNCSSAVFVSNTERWMGGGSQEGFPGPGAYSPRALGKYSFIYNYDQKWVPVL
SIO_010081: STPG1
subclass of: SO_0000673
so part of: STPG1
location: join(392716..392731,393539..393642,395826..395927,396706..396879,399566..399677,400375..400540,401986..402176,405018..405094)
location: region:392716-405094:1
so has part: feature:392716-392731:1:exon
so has part: feature:393539-393642:1:exon
so has part: feature:395826-395927:1:exon
so has part: feature:396706-396879:1:exon
so has part: feature:399566-399677:1:exon
so has part: feature:400375-400540:1:exon
so has part: feature:401986-402176:1:exon
so has part: feature:405018-405094:1:exon

XP_038023138.1
type: Protein
SIO_000068: ncbiprotein

position:392716:1
position: 392716
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:405094:1
position: 405094
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:392716-392731:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:393539-393642:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:395826-395927:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:396706-396879:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:399566-399677:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:400375-400540:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:401986-402176:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:405018-405094:1:exon

STPG1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8839
gene: STPG1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: O(6)-methylguanine-induced apoptosis 2 isoform X3
translation: MGGARGFQISSSPYKHHGKVISDSEKNGFNSQSKRFQYNQVPRTAHKKISSFPAANAYNILSHFQSRRDFSMGNSSVFQQPISRKTEKIPTPAPNQYHTSTDFCKQSNNVSAHAVFVSRTTRGLNLEKIGKWPSPCHYNINDSLTKVSPKGITSCFKSKTSHLTRTDRITAEPTIYQPYKPTRETKKTPFKQKFCLTLCAPAIPPCKDPPFPGPGQYNLVDYGGSLKQNCSSAVFVSNTERWMGGGSQEGFPGPGAYSPRALGKYSFIYNYDQKWVPVL
SIO_010081: STPG1
subclass of: SO_0000673
so part of: STPG1
location: join(392716..392731,393539..393642,396706..396879,399566..399677,400375..400540,401986..402176,405018..405094)
location: region:392716-405094:1
so has part: feature:392716-392731:1:exon
so has part: feature:393539-393642:1:exon
so has part: feature:396706-396879:1:exon
so has part: feature:399566-399677:1:exon
so has part: feature:400375-400540:1:exon
so has part: feature:401986-402176:1:exon
so has part: feature:405018-405094:1:exon

XP_038023140.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:392716-392731:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:393539-393642:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:396706-396879:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:399566-399677:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:400375-400540:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:401986-402176:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:405018-405094:1:exon

STPG1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8839
gene: STPG1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: O(6)-methylguanine-induced apoptosis 2 isoform X2
translation: MGGARGFQISSSPYKHHGKVISDSEKNGFNSQSKRFQYNQSENPGPGFYNVTHQSPEINSPSLSKKGTGYFPSLVPRTAHKKISSFPAANAYNILSHFQSRRDFSMGNSSVFQQPISRKTEKIPTPAPNQYHTSTDFCKQSNNVSAHAVFVSRTTRGLNLEKIGKWPSPCHYNINDSLTKVSPKGITSCFKSKTSHLTRTDRITAEPTIYQPYKPTRETKKTPFKQKFCLTLCAPAIPPCKDPPFPGPGQYNLVDYGGSLKQNCSSAVFVSNTERWMGGGSQEGFPGPGRKQSTEIGEPTFKGM
SIO_010081: STPG1
subclass of: SO_0000673
so part of: STPG1
location: join(392716..392731,393539..393642,395826..395927,396706..396879,399566..399677,400375..400540,401986..402176,402268..402317)
location: region:392716-402317:1
so has part: feature:392716-392731:1:exon
so has part: feature:393539-393642:1:exon
so has part: feature:395826-395927:1:exon
so has part: feature:396706-396879:1:exon
so has part: feature:399566-399677:1:exon
so has part: feature:400375-400540:1:exon
so has part: feature:401986-402176:1:exon
so has part: feature:402268-402317:1:exon

XP_038023139.1
type: Protein
SIO_000068: ncbiprotein

position:402317:1
position: 402317
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:392716-392731:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:393539-393642:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:395826-395927:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:396706-396879:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:399566-399677:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:400375-400540:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:401986-402176:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:402268-402317:1:exon

STPG1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8839
gene: STPG1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: O(6)-methylguanine-induced apoptosis 2 isoform X4
translation: MGGARGFQISSSPYKHHGKVISDSEKNGFNSQSKRFQYNQSENPGPGFYNVTHQSPEINSPSLSKKGTGYFPSLVPRTAHKKISSFPAANAYNILSHFQSRRDFSMGNSSVFQQPISRKTEKIPTPAPNQYHTSTDFCKQSNNVSAHAVFVSRTTRGLNLEKIGKWPSPCHYNINDSLTKVSPKGITSCFKSKTSHLTRTDRITAEPTIYQPYKPTRETKKTPFK
SIO_010081: STPG1
subclass of: SO_0000673
so part of: STPG1
location: join(392716..392731,393539..393642,395826..395927,396706..396879,399566..399677,400375..400540,401848..401851)
location: region:392716-401851:1
so has part: feature:392716-392731:1:exon
so has part: feature:393539-393642:1:exon
so has part: feature:395826-395927:1:exon
so has part: feature:396706-396879:1:exon
so has part: feature:399566-399677:1:exon
so has part: feature:400375-400540:1:exon
so has part: feature:401848-401851:1:exon

XP_038023141.1
type: Protein
SIO_000068: ncbiprotein

position:401851:1
position: 401851
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:392716-392731:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:393539-393642:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:395826-395927:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:396706-396879:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:399566-399677:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:400375-400540:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:401848-401851:1:exon

LOC119713595
type: Gene
subclass of: SO_0000704
RO_0002162: 8839
gene: LOC119713595
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(393747..406914)
location: region:393747-406914:-1
so has part: feature:393747-406914:-1:exon
subclass of: SO_0000011

119713595
type: Gene
SIO_000068: ncbigene

position:393747:-1
position: 393747
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:406914:-1
position: 406914
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:393747-406914:-1:exon

LOC119713595
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 8839
nc RNA class: lncRNA
gene: LOC119713595
product: uncharacterized LOC119713595, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 17 samples with support for all annotated introns
transcript id: XR_005260784.1
SIO_010081: LOC119713595
subclass of: SO_0000673
so part of: LOC119713595
location: complement(join(393747..394514,394591..394656,406739..406914))
location: region:393747-406914:-1
so has part: feature:406739-406914:-1:exon
so has part: feature:394591-394656:-1:exon
so has part: feature:393747-394514:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:406739-406914:-1:exon

position:406739:-1
position: 406739
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:394591-394656:-1:exon

position:394591:-1
position: 394591
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:394656:-1
position: 394656
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:393747-394514:-1:exon

position:394514:-1
position: 394514
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC119713595
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 8839
nc RNA class: lncRNA
gene: LOC119713595
product: uncharacterized LOC119713595, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 57 samples with support for all annotated introns
transcript id: XR_005260783.1
SIO_010081: LOC119713595
subclass of: SO_0000673
so part of: LOC119713595
location: complement(join(393747..394514,394591..396316))
location: region:393747-396316:-1
so has part: feature:394591-396316:-1:exon
so has part: feature:393747-394514:-1:exon

position:396316:-1
position: 396316
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:394591-396316:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:393747-394514:-1:exon

GRHL3
type: Gene
subclass of: SO_0000704
RO_0002162: 8839
gene: GRHL3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(406944..436283)
location: region:406944-436283:-1
so has part: feature:406944-436283:-1:exon
subclass of: SO_0000010

119713591
type: Gene
SIO_000068: ncbigene

position:406944:-1
position: 406944
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:436283:-1
position: 436283
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:406944-436283:-1:exon

GRHL3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8839
gene: GRHL3
product: grainyhead like transcription factor 3, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 7 samples with support for all annotated introns
transcript id: XM_038167205.1
SIO_010081: GRHL3
subclass of: SO_0000673
so part of: GRHL3
location: complement(join(406944..408506,412319..412383,413540..413625,413770..413858,414714..414748,415621..415754,416171..416249,416876..417034,418804..418898,419602..419713,420692..420845,422151..422230,422526..422862,424432..424493,425198..425384,436132..436283))
location: region:406944-436283:-1
so has part: feature:436132-436283:-1:exon
so has part: feature:425198-425384:-1:exon
so has part: feature:424432-424493:-1:exon
so has part: feature:422526-422862:-1:exon
so has part: feature:422151-422230:-1:exon
so has part: feature:420692-420845:-1:exon
so has part: feature:419602-419713:-1:exon
so has part: feature:418804-418898:-1:exon
so has part: feature:416876-417034:-1:exon
so has part: feature:416171-416249:-1:exon
so has part: feature:415621-415754:-1:exon
so has part: feature:414714-414748:-1:exon
so has part: feature:413770-413858:-1:exon
so has part: feature:413540-413625:-1:exon
so has part: feature:412319-412383:-1:exon
so has part: feature:406944-408506:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:436132-436283:-1:exon

position:436132:-1
position: 436132
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:425198-425384:-1:exon

position:425198:-1
position: 425198
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:425384:-1
position: 425384
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:424432-424493:-1:exon

position:424432:-1
position: 424432
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:424493:-1
position: 424493
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:422526-422862:-1:exon

position:422526:-1
position: 422526
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:422862:-1
position: 422862
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:422151-422230:-1:exon

position:422151:-1
position: 422151
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:422230:-1
position: 422230
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:420692-420845:-1:exon

position:420692:-1
position: 420692
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:420845:-1
position: 420845
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:419602-419713:-1:exon

position:419602:-1
position: 419602
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:419713:-1
position: 419713
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:418804-418898:-1:exon

position:418804:-1
position: 418804
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:418898:-1
position: 418898
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:416876-417034:-1:exon

position:416876:-1
position: 416876
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:417034:-1
position: 417034
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:416171-416249:-1:exon

position:416171:-1
position: 416171
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:416249:-1
position: 416249
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:415621-415754:-1:exon

position:415621:-1
position: 415621
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:415754:-1
position: 415754
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:414714-414748:-1:exon

position:414714:-1
position: 414714
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:414748:-1
position: 414748
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:413770-413858:-1:exon

position:413770:-1
position: 413770
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:413858:-1
position: 413858
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:413540-413625:-1:exon

position:413540:-1
position: 413540
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:413625:-1
position: 413625
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:412319-412383:-1:exon

position:412319:-1
position: 412319
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:412383:-1
position: 412383
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:406944-408506:-1:exon

position:408506:-1
position: 408506
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

GRHL3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8839
gene: GRHL3
product: grainyhead like transcription factor 3, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
transcript id: XM_038167206.1
SIO_010081: GRHL3
subclass of: SO_0000673
so part of: GRHL3
location: complement(join(406944..408506,412319..412383,413540..413625,413770..413858,414714..414748,415621..415754,416171..416249,416876..417034,418804..418898,419602..419713,420692..420845,422151..422230,422526..422862,424432..424493,425198..425384,435394..435580))
location: region:406944-435580:-1
so has part: feature:435394-435580:-1:exon
so has part: feature:425198-425384:-1:exon
so has part: feature:424432-424493:-1:exon
so has part: feature:422526-422862:-1:exon
so has part: feature:422151-422230:-1:exon
so has part: feature:420692-420845:-1:exon
so has part: feature:419602-419713:-1:exon
so has part: feature:418804-418898:-1:exon
so has part: feature:416876-417034:-1:exon
so has part: feature:416171-416249:-1:exon
so has part: feature:415621-415754:-1:exon
so has part: feature:414714-414748:-1:exon
so has part: feature:413770-413858:-1:exon
so has part: feature:413540-413625:-1:exon
so has part: feature:412319-412383:-1:exon
so has part: feature:406944-408506:-1:exon

position:435580:-1
position: 435580
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:435394-435580:-1:exon

position:435394:-1
position: 435394
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:425198-425384:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:424432-424493:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:422526-422862:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:422151-422230:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:420692-420845:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:419602-419713:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:418804-418898:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:416876-417034:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:416171-416249:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:415621-415754:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:414714-414748:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:413770-413858:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:413540-413625:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:412319-412383:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:406944-408506:-1:exon

GRHL3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8839
gene: GRHL3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: grainyhead-like protein 3 homolog isoform X1
translation: MACVRAPRCNAPVRAVKAGQRVRVYGEGFSHRPALFRSVRLMKNDTMNFQKFSYTNEDEAWKTYLENPLTAATKAMMRVNGDDDSVAALSLLYDYYMVPKEKRILPSGMMGRNELGKRHCHGMEYDPEIASFDGSAHLMKLLSENTSMTQEYCEPQKKNGLNLEGIPTPHKPAMLPPGVSKLDATPDTYMVPPADVYDNSSLNSLFETIPVAPAQQRWQPDSTFKEDPQESLLFSDILKPQPEPPCPESYATDSVKSDFEYTLGSPKAIHIKSGDSPMAYLNKGQFYPITLRTAGDSKCLHLSSNKVKSVVMIVFDNEKIPTEQLKFWKHWHSRQPTAKQRVIDVADCKENFNTVQNIEELAYNALSFVWNVHEEAKVFIGVNCLSTDFSSQKGVKGVPLNLQIDTYDYGNGTSQLVHRAVCQIKIFCDKGAERKMRDDERKQFRRKGKCLDSNNNGLKGCLLSGFRGNEITFLRPETDLETQPVLFIPNVHFSNQQRCGTVLPPAVPNSSNRLPLKRSGTSFTDEFDPIPPKQTKEEDPQRVLLYVRRESEEVFDALMLKTPDLQGLRTAISEKYGLPEESIYKVYKKCKRGILVNMDNNIIQHYSNHMAFLLDMVEAEDKIQVHPQGAIKSRRQHLLGLLSKTASLTQLELSLGPRFVAFT
SIO_010081: GRHL3
subclass of: SO_0000673
so part of: GRHL3
location: complement(join(408293..408506,412319..412383,413540..413625,413770..413858,414714..414748,415621..415754,416171..416249,416876..417034,418804..418898,419602..419713,420692..420845,422151..422230,422526..422862,424432..424493,425198..425384,436132..436235))
location: region:408293-436235:-1
so has part: feature:436132-436235:-1:exon
so has part: feature:425198-425384:-1:exon
so has part: feature:424432-424493:-1:exon
so has part: feature:422526-422862:-1:exon
so has part: feature:422151-422230:-1:exon
so has part: feature:420692-420845:-1:exon
so has part: feature:419602-419713:-1:exon
so has part: feature:418804-418898:-1:exon
so has part: feature:416876-417034:-1:exon
so has part: feature:416171-416249:-1:exon
so has part: feature:415621-415754:-1:exon
so has part: feature:414714-414748:-1:exon
so has part: feature:413770-413858:-1:exon
so has part: feature:413540-413625:-1:exon
so has part: feature:412319-412383:-1:exon
so has part: feature:408293-408506:-1:exon

XP_038023133.1
type: Protein
SIO_000068: ncbiprotein

position:408293:-1
position: 408293
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:436235:-1
position: 436235
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:436132-436235:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:425198-425384:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:424432-424493:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:422526-422862:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:422151-422230:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:420692-420845:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:419602-419713:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:418804-418898:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:416876-417034:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:416171-416249:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:415621-415754:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:414714-414748:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:413770-413858:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:413540-413625:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:412319-412383:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:408293-408506:-1:exon

GRHL3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8839
gene: GRHL3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: grainyhead-like protein 3 homolog isoform X2
translation: MSNELDFRSVRLMKNDTMNFQKFSYTNEDEAWKTYLENPLTAATKAMMRVNGDDDSVAALSLLYDYYMVPKEKRILPSGMMGRNELGKRHCHGMEYDPEIASFDGSAHLMKLLSENTSMTQEYCEPQKKNGLNLEGIPTPHKPAMLPPGVSKLDATPDTYMVPPADVYDNSSLNSLFETIPVAPAQQRWQPDSTFKEDPQESLLFSDILKPQPEPPCPESYATDSVKSDFEYTLGSPKAIHIKSGDSPMAYLNKGQFYPITLRTAGDSKCLHLSSNKVKSVVMIVFDNEKIPTEQLKFWKHWHSRQPTAKQRVIDVADCKENFNTVQNIEELAYNALSFVWNVHEEAKVFIGVNCLSTDFSSQKGVKGVPLNLQIDTYDYGNGTSQLVHRAVCQIKIFCDKGAERKMRDDERKQFRRKGKCLDSNNNGLKGCLLSGFRGNEITFLRPETDLETQPVLFIPNVHFSNQQRCGTVLPPAVPNSSNRLPLKRSGTSFTDEFDPIPPKQTKEEDPQRVLLYVRRESEEVFDALMLKTPDLQGLRTAISEKYGLPEESIYKVYKKCKRGILVNMDNNIIQHYSNHMAFLLDMVEAEDKIQVHPQGAIKSRRQHLLGLLSKTASLTQLELSLGPRFVAFT
SIO_010081: GRHL3
subclass of: SO_0000673
so part of: GRHL3
location: complement(join(408293..408506,412319..412383,413540..413625,413770..413858,414714..414748,415621..415754,416171..416249,416876..417034,418804..418898,419602..419713,420692..420845,422151..422230,422526..422862,424432..424493,425198..425384,435394..435410))
location: region:408293-435410:-1
so has part: feature:435394-435410:-1:exon
so has part: feature:425198-425384:-1:exon
so has part: feature:424432-424493:-1:exon
so has part: feature:422526-422862:-1:exon
so has part: feature:422151-422230:-1:exon
so has part: feature:420692-420845:-1:exon
so has part: feature:419602-419713:-1:exon
so has part: feature:418804-418898:-1:exon
so has part: feature:416876-417034:-1:exon
so has part: feature:416171-416249:-1:exon
so has part: feature:415621-415754:-1:exon
so has part: feature:414714-414748:-1:exon
so has part: feature:413770-413858:-1:exon
so has part: feature:413540-413625:-1:exon
so has part: feature:412319-412383:-1:exon
so has part: feature:408293-408506:-1:exon

XP_038023134.1
type: Protein
SIO_000068: ncbiprotein

position:435410:-1
position: 435410
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:435394-435410:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:425198-425384:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:424432-424493:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:422526-422862:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:422151-422230:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:420692-420845:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:419602-419713:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:418804-418898:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:416876-417034:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:416171-416249:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:415621-415754:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:414714-414748:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:413770-413858:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:413540-413625:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:412319-412383:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:408293-408506:-1:exon

LOC119713684
type: Gene
subclass of: SO_0000704
RO_0002162: 8839
gene: LOC119713684
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(456778..457607)
location: region:456778-457607:-1
so has part: feature:456778-457607:-1:exon
subclass of: SO_0000011

119713684
type: Gene
SIO_000068: ncbigene

position:456778:-1
position: 456778
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:457607:-1
position: 457607
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:456778-457607:-1:exon

LOC119713684
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 8839
nc RNA class: lncRNA
gene: LOC119713684
product: uncharacterized LOC119713684
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 8 samples with support for all annotated introns
transcript id: XR_005260890.1
SIO_010081: LOC119713684
subclass of: SO_0000673
so part of: LOC119713684
location: complement(join(456778..457067,457436..457607))
location: region:456778-457607:-1
so has part: feature:457436-457607:-1:exon
so has part: feature:456778-457067:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:457436-457607:-1:exon

position:457436:-1
position: 457436
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:456778-457067:-1:exon

position:457067:-1
position: 457067
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

IFNLR1
type: Gene
subclass of: SO_0000704
RO_0002162: 8839
gene: IFNLR1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 464767..470289
location: region:464767-470289:1
so has part: feature:464767-470289:1:exon
subclass of: SO_0000010

119713637
type: Gene
SIO_000068: ncbigene

position:464767:1
position: 464767
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:470289:1
position: 470289
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:464767-470289:1:exon

IFNLR1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8839
gene: IFNLR1
product: interferon lambda receptor 1
exception: unclassified transcription discrepancy
note: The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: deleted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins, and 98% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_038167352.1
SIO_010081: IFNLR1
subclass of: SO_0000673
so part of: IFNLR1
location: join(464767..464979,465647..465770,466024..466203,466635..466779,467317..467473,468213..468340,468564..470289)
location: region:464767-470289:1
so has part: feature:464767-464979:1:exon
so has part: feature:465647-465770:1:exon
so has part: feature:466024-466203:1:exon
so has part: feature:466635-466779:1:exon
so has part: feature:467317-467473:1:exon
so has part: feature:468213-468340:1:exon
so has part: feature:468564-470289:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:464767-464979:1:exon

position:464979:1
position: 464979
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:465647-465770:1:exon

position:465647:1
position: 465647
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:465770:1
position: 465770
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:466024-466203:1:exon

position:466024:1
position: 466024
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:466203:1
position: 466203
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:466635-466779:1:exon

position:466635:1
position: 466635
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:466779:1
position: 466779
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:467317-467473:1:exon

position:467317:1
position: 467317
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:467473:1
position: 467473
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:468213-468340:1:exon

position:468213:1
position: 468213
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:468340:1
position: 468340
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:468564-470289:1:exon

position:468564:1
position: 468564
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

IFNLR1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8839
gene: IFNLR1
exception: unclassified translation discrepancy
note: The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: deleted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: LOW QUALITY PROTEIN: interferon lambda receptor 1
translation: MSAWRIRVLVALCFLRQPRGHIQLPPPQNVTLLSKDFDMILTWTPGEGSPPDVAYTVRYESQERMDKWIKVRHCRNIHSTSCNLTCVLPNFFIKFRARVKAVSGKLQSPWVESQFKEYLFGVELAPPVLNVNVQENVLHVNATFPLATCVESFSWMYDLNLWEAGSEDKKQYESIFRKNTVTIDTTALRGNYCLSARSSFQSIGFKYSKFSQPVCMLLNRKAVEWKLPYSAMIPMFVFAVLLASAFIAWLLKQDAKHKKLPRALDLSNFKVAGPPFHCELREEFLVDSLTCTEQPVSQGKKNRTSPRNNPSCVASLLSSSSSEEEEEDEEDSRTFIPYTEMRHFPKRCLKYQASRTAGPETGTGSTSGGLSVDSGSVLDFTGLGFSFFPVRQNEVDTSGSHGSEQASLPHSSSLGRISLTDVRFPGPEEHEQHDTDPEDCLEMPPLQIPLNRICASLPADEHCLHRKHQHVTTCHQEPLTDLPVHVREKSQLSVDPSMEQLICFQTLQVAEDEGIASDCDSDHFIEGTPPASTVLSDAFGTSNMEGKYNQEFKLKGYQHTHYMGRS
SIO_010081: IFNLR1
subclass of: SO_0000673
so part of: IFNLR1
location: join(464922..464979,465647..465770,466024..466203,466635..466779,467317..467473,468213..468340,468564..469473)
location: region:464922-469473:1
so has part: feature:464922-464979:1:exon
so has part: feature:465647-465770:1:exon
so has part: feature:466024-466203:1:exon
so has part: feature:466635-466779:1:exon
so has part: feature:467317-467473:1:exon
so has part: feature:468213-468340:1:exon
so has part: feature:468564-469473:1:exon

XP_038023280.1
type: Protein
SIO_000068: ncbiprotein

position:464922:1
position: 464922
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:469473:1
position: 469473
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:464922-464979:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:465647-465770:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:466024-466203:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:466635-466779:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:467317-467473:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:468213-468340:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:468564-469473:1:exon

LOC119713638
type: Gene
subclass of: SO_0000704
RO_0002162: 8839
gene: LOC119713638
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(470349..475683)
location: region:470349-475683:-1
so has part: feature:470349-475683:-1:exon
subclass of: SO_0000011

119713638
type: Gene
SIO_000068: ncbigene

position:470349:-1
position: 470349
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:475683:-1
position: 475683
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:470349-475683:-1:exon

LOC119713638
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 8839
nc RNA class: lncRNA
gene: LOC119713638
product: uncharacterized LOC119713638
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 7 samples with support for all annotated introns
transcript id: XR_005260845.1
SIO_010081: LOC119713638
subclass of: SO_0000673
so part of: LOC119713638
location: complement(join(470349..470480,470918..470965,475438..475683))
location: region:470349-475683:-1
so has part: feature:475438-475683:-1:exon
so has part: feature:470918-470965:-1:exon
so has part: feature:470349-470480:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:475438-475683:-1:exon

position:475438:-1
position: 475438
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:470918-470965:-1:exon

position:470918:-1
position: 470918
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:470965:-1
position: 470965
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:470349-470480:-1:exon

position:470480:-1
position: 470480
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

IL22RA1
type: Gene
subclass of: SO_0000704
RO_0002162: 8839
gene: IL22RA1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 471856..479646
location: region:471856-479646:1
so has part: feature:471856-479646:1:exon
subclass of: SO_0000010

119713636
type: Gene
SIO_000068: ncbigene

position:471856:1
position: 471856
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:479646:1
position: 479646
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:471856-479646:1:exon

IL22RA1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8839
gene: IL22RA1
product: interleukin 22 receptor subunit alpha 1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 49 samples with support for all annotated introns
transcript id: XM_038167351.1
SIO_010081: IL22RA1
subclass of: SO_0000673
so part of: IL22RA1
location: join(471856..472255,474430..474562,475248..475429,476640..476824,477293..477428,477663..477784,478150..479646)
location: region:471856-479646:1
so has part: feature:471856-472255:1:exon
so has part: feature:474430-474562:1:exon
so has part: feature:475248-475429:1:exon
so has part: feature:476640-476824:1:exon
so has part: feature:477293-477428:1:exon
so has part: feature:477663-477784:1:exon
so has part: feature:478150-479646:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:471856-472255:1:exon

position:472255:1
position: 472255
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:474430-474562:1:exon

position:474430:1
position: 474430
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:474562:1
position: 474562
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:475248-475429:1:exon

position:475248:1
position: 475248
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:475429:1
position: 475429
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:476640-476824:1:exon

position:476640:1
position: 476640
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:476824:1
position: 476824
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:477293-477428:1:exon

position:477293:1
position: 477293
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:477428:1
position: 477428
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:477663-477784:1:exon

position:477663:1
position: 477663
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:477784:1
position: 477784
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:478150-479646:1:exon

position:478150:1
position: 478150
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

IL22RA1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8839
gene: IL22RA1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: interleukin-22 receptor subunit alpha-1
translation: MKKFLIVLAVCSVVGIATTERSSCLKRAAFSSTNFENILTWETEADIPPGTVYDVQYKQYGEKAWLNKRECQNITQPFCNLTRETENFTEHYYARVRATGQNYCSSSWVRSERFEPRKETVIGAPELEYIPYVRSIKFLIRPPYTPLRGEDGHQLTIEDIYSKFGPVDYHLTLFNQRTHQKWIKNEHNKEFEVINLDPDTEYNGTVYIHLRERSSKSQVFWVKTLPDTTWLLYCFVALGFCAGLVFAAISYVIYKYVKQHSAQPMSLDFRGISSFQPLTLTVEHIIKPINLSKPSLLIPEVQLAQISQHLDRALEPPRPLCPPEATYQQQADVQASQLPAEPPCPASTSPAYAPQRAEQSVSSLPLTYGVCVDGTDHVDKNSLHPKQVLKEVSPDSFAAVKLVNQVLGKSCSHWSYKEQRPNVALWGSSDAGEPALMQQSPGQMQQLLLQTDGTENKVHAPQLALSLVGQGGCYRQQTAELPLLLSSVTVDGDQVSEDESLPSPSAALLLSVSTGNSFPGESNMEWWMSSGSVSHPENKFYFLETQETQKLTAAKDLSCTKLDNVLSQDTISDRGNGFSLTTLFKDLNLKVLWDQEDENAEFY
SIO_010081: IL22RA1
subclass of: SO_0000673
so part of: IL22RA1
location: join(472213..472255,474430..474562,475248..475429,476640..476824,477293..477428,477663..477784,478150..479160)
location: region:472213-479160:1
so has part: feature:472213-472255:1:exon
so has part: feature:474430-474562:1:exon
so has part: feature:475248-475429:1:exon
so has part: feature:476640-476824:1:exon
so has part: feature:477293-477428:1:exon
so has part: feature:477663-477784:1:exon
so has part: feature:478150-479160:1:exon

XP_038023279.1
type: Protein
SIO_000068: ncbiprotein

position:472213:1
position: 472213
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:479160:1
position: 479160
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:472213-472255:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:474430-474562:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:475248-475429:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:476640-476824:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:477293-477428:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:477663-477784:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:478150-479160:1:exon

MYOM3
type: Gene
subclass of: SO_0000704
RO_0002162: 8839
gene: MYOM3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 482196..508959
location: region:482196-508959:1
so has part: feature:482196-508959:1:exon
subclass of: SO_0000010

119713635
type: Gene
SIO_000068: ncbigene

position:482196:1
position: 482196
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:508959:1
position: 508959
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:482196-508959:1:exon

MYOM3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8839
gene: MYOM3
product: myomesin 3, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 7 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 29 samples with support for all annotated introns
transcript id: XM_038167349.1
SIO_010081: MYOM3
subclass of: SO_0000673
so part of: MYOM3
location: join(482196..484229,486307..486433,486595..486669,487367..487527,487769..487926,488728..488823,489249..489337,490520..490564,490765..490905,491469..491630,491915..492056,492149..492348,492680..492733,493062..493189,494058..494241,495126..495300,495940..496061,496731..496918,497094..497220,497715..497893,497970..498084,498302..498458,498809..498918,499416..499460,499590..499726,501362..501506,502724..502783,503469..503536,503825..503935,504563..504650,504981..505019,505442..505547,506438..506601,507219..507255,507381..507403,507494..507549,508243..508959)
location: region:482196-508959:1
so has part: feature:482196-484229:1:exon
so has part: feature:486307-486433:1:exon
so has part: feature:486595-486669:1:exon
so has part: feature:487367-487527:1:exon
so has part: feature:487769-487926:1:exon
so has part: feature:488728-488823:1:exon
so has part: feature:489249-489337:1:exon
so has part: feature:490520-490564:1:exon
so has part: feature:490765-490905:1:exon
so has part: feature:491469-491630:1:exon
so has part: feature:491915-492056:1:exon
so has part: feature:492149-492348:1:exon
so has part: feature:492680-492733:1:exon
so has part: feature:493062-493189:1:exon
so has part: feature:494058-494241:1:exon
so has part: feature:495126-495300:1:exon
so has part: feature:495940-496061:1:exon
so has part: feature:496731-496918:1:exon
so has part: feature:497094-497220:1:exon
so has part: feature:497715-497893:1:exon
so has part: feature:497970-498084:1:exon
so has part: feature:498302-498458:1:exon
so has part: feature:498809-498918:1:exon
so has part: feature:499416-499460:1:exon
so has part: feature:499590-499726:1:exon
so has part: feature:501362-501506:1:exon
so has part: feature:502724-502783:1:exon
so has part: feature:503469-503536:1:exon
so has part: feature:503825-503935:1:exon
so has part: feature:504563-504650:1:exon
so has part: feature:504981-505019:1:exon
so has part: feature:505442-505547:1:exon
so has part: feature:506438-506601:1:exon
so has part: feature:507219-507255:1:exon
so has part: feature:507381-507403:1:exon
so has part: feature:507494-507549:1:exon
so has part: feature:508243-508959:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:482196-484229:1:exon

position:484229:1
position: 484229
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:486307-486433:1:exon

position:486307:1
position: 486307
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:486433:1
position: 486433
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:486595-486669:1:exon

position:486595:1
position: 486595
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:486669:1
position: 486669
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:487367-487527:1:exon

position:487367:1
position: 487367
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:487527:1
position: 487527
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:487769-487926:1:exon

position:487769:1
position: 487769
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:487926:1
position: 487926
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:488728-488823:1:exon

position:488728:1
position: 488728
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:488823:1
position: 488823
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:489249-489337:1:exon

position:489249:1
position: 489249
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:489337:1
position: 489337
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:490520-490564:1:exon

position:490520:1
position: 490520
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:490564:1
position: 490564
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:490765-490905:1:exon

position:490765:1
position: 490765
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:490905:1
position: 490905
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:491469-491630:1:exon

position:491469:1
position: 491469
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:491630:1
position: 491630
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:491915-492056:1:exon

position:491915:1
position: 491915
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:492056:1
position: 492056
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:492149-492348:1:exon

position:492149:1
position: 492149
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:492348:1
position: 492348
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:492680-492733:1:exon

position:492680:1
position: 492680
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:492733:1
position: 492733
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:493062-493189:1:exon

position:493062:1
position: 493062
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:493189:1
position: 493189
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:494058-494241:1:exon

position:494058:1
position: 494058
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:494241:1
position: 494241
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:495126-495300:1:exon

position:495126:1
position: 495126
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:495300:1
position: 495300
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:495940-496061:1:exon

position:495940:1
position: 495940
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:496061:1
position: 496061
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:496731-496918:1:exon

position:496731:1
position: 496731
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:496918:1
position: 496918
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:497094-497220:1:exon

position:497094:1
position: 497094
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:497220:1
position: 497220
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:497715-497893:1:exon

position:497715:1
position: 497715
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:497893:1
position: 497893
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:497970-498084:1:exon

position:497970:1
position: 497970
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:498084:1
position: 498084
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 22
SIO_000628: feature:498302-498458:1:exon

position:498302:1
position: 498302
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:498458:1
position: 498458
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 23
SIO_000628: feature:498809-498918:1:exon

position:498809:1
position: 498809
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:498918:1
position: 498918
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 24
SIO_000628: feature:499416-499460:1:exon

position:499416:1
position: 499416
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:499460:1
position: 499460
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 25
SIO_000628: feature:499590-499726:1:exon

position:499590:1
position: 499590
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:499726:1
position: 499726
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 26
SIO_000628: feature:501362-501506:1:exon

position:501362:1
position: 501362
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:501506:1
position: 501506
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 27
SIO_000628: feature:502724-502783:1:exon

position:502724:1
position: 502724
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:502783:1
position: 502783
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 28
SIO_000628: feature:503469-503536:1:exon

position:503469:1
position: 503469
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:503536:1
position: 503536
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 29
SIO_000628: feature:503825-503935:1:exon

position:503825:1
position: 503825
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:503935:1
position: 503935
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 30
SIO_000628: feature:504563-504650:1:exon

position:504563:1
position: 504563
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:504650:1
position: 504650
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 31
SIO_000628: feature:504981-505019:1:exon

position:504981:1
position: 504981
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:505019:1
position: 505019
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 32
SIO_000628: feature:505442-505547:1:exon

position:505442:1
position: 505442
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:505547:1
position: 505547
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 33
SIO_000628: feature:506438-506601:1:exon

position:506438:1
position: 506438
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:506601:1
position: 506601
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 34
SIO_000628: feature:507219-507255:1:exon

position:507219:1
position: 507219
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:507255:1
position: 507255
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 35
SIO_000628: feature:507381-507403:1:exon

position:507381:1
position: 507381
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:507403:1
position: 507403
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 36
SIO_000628: feature:507494-507549:1:exon

position:507494:1
position: 507494
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:507549:1
position: 507549
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 37
SIO_000628: feature:508243-508959:1:exon

position:508243:1
position: 508243
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

MYOM3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8839
gene: MYOM3
product: myomesin 3, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 7 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 17 samples with support for all annotated introns
transcript id: XM_038167350.1
SIO_010081: MYOM3
subclass of: SO_0000673
so part of: MYOM3
location: join(486074..486185,486307..486433,486595..486669,487367..487527,487769..487926,488728..488823,489249..489337,490520..490564,490765..490905,491469..491630,491915..492056,492149..492348,492680..492733,493062..493189,494058..494241,495126..495300,495940..496061,496731..496918,497094..497220,497715..497893,497970..498084,498302..498458,498809..498918,499416..499460,499590..499726,501362..501506,502724..502783,503469..503536,503825..503935,504563..504650,504981..505019,505442..505547,506438..506601,507219..507255,507381..507403,507494..507549,508243..508959)
location: region:486074-508959:1
so has part: feature:486074-486185:1:exon
so has part: feature:486307-486433:1:exon
so has part: feature:486595-486669:1:exon
so has part: feature:487367-487527:1:exon
so has part: feature:487769-487926:1:exon
so has part: feature:488728-488823:1:exon
so has part: feature:489249-489337:1:exon
so has part: feature:490520-490564:1:exon
so has part: feature:490765-490905:1:exon
so has part: feature:491469-491630:1:exon
so has part: feature:491915-492056:1:exon
so has part: feature:492149-492348:1:exon
so has part: feature:492680-492733:1:exon
so has part: feature:493062-493189:1:exon
so has part: feature:494058-494241:1:exon
so has part: feature:495126-495300:1:exon
so has part: feature:495940-496061:1:exon
so has part: feature:496731-496918:1:exon
so has part: feature:497094-497220:1:exon
so has part: feature:497715-497893:1:exon
so has part: feature:497970-498084:1:exon
so has part: feature:498302-498458:1:exon
so has part: feature:498809-498918:1:exon
so has part: feature:499416-499460:1:exon
so has part: feature:499590-499726:1:exon
so has part: feature:501362-501506:1:exon
so has part: feature:502724-502783:1:exon
so has part: feature:503469-503536:1:exon
so has part: feature:503825-503935:1:exon
so has part: feature:504563-504650:1:exon
so has part: feature:504981-505019:1:exon
so has part: feature:505442-505547:1:exon
so has part: feature:506438-506601:1:exon
so has part: feature:507219-507255:1:exon
so has part: feature:507381-507403:1:exon
so has part: feature:507494-507549:1:exon
so has part: feature:508243-508959:1:exon

position:486074:1
position: 486074
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:486074-486185:1:exon

position:486185:1
position: 486185
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:486307-486433:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:486595-486669:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:487367-487527:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:487769-487926:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:488728-488823:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:489249-489337:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:490520-490564:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:490765-490905:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:491469-491630:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:491915-492056:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:492149-492348:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:492680-492733:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:493062-493189:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:494058-494241:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:495126-495300:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:495940-496061:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:496731-496918:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:497094-497220:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:497715-497893:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:497970-498084:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:498302-498458:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:498809-498918:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:499416-499460:1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:499590-499726:1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:501362-501506:1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:502724-502783:1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:503469-503536:1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:503825-503935:1:exon

urn:…
SIO_000300: 30
SIO_000628: feature:504563-504650:1:exon

urn:…
SIO_000300: 31
SIO_000628: feature:504981-505019:1:exon

urn:…
SIO_000300: 32
SIO_000628: feature:505442-505547:1:exon

urn:…
SIO_000300: 33
SIO_000628: feature:506438-506601:1:exon

urn:…
SIO_000300: 34
SIO_000628: feature:507219-507255:1:exon

urn:…
SIO_000300: 35
SIO_000628: feature:507381-507403:1:exon

urn:…
SIO_000300: 36
SIO_000628: feature:507494-507549:1:exon

urn:…
SIO_000300: 37
SIO_000628: feature:508243-508959:1:exon

MYOM3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8839
gene: MYOM3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: myomesin-3
translation: MEKLEKEVIRNCRLLRVRADRKALRRKAVEKAQMEKDYIELRSGRPPMFWIPLRVHAVWERMEVTLACTVLASPPPQVTWYKNGVPIDLRLAPAGKYKIKNKFGMLTLQISRCSMEDSAEYSVEIKNQYGEAYSFATVLVRKYYGKESGFDSEIYRRSLIAREADFAFSMKPLFSREKEPFTLSCYFSSDLLEHQRDIAWFRDGELLQNSECHKLKYQDREASLTVSCAHKEDEGFYTIRVPSLDGYKEQTTYVFVRDAAAETPGAPGSPLNVKCHDVNKDCLILSWVAPSDNGGSPILGYFIERCVAGSEEWVPCNDRPVKTCRYPVLGLTEGQTYQFRVKAVNKAGISHPSKASAPVTTYDPSKDKRVTVIPYDEGRKIEIFKDDLEGHIKVPLPPTNVHASEVREYYVALAWDEPDPRGREPLNYYVEKSIVGSNSWQMVNLDTPVNSPRFALFDLVKGKSYCFRVRSVNKYGISEPSLPSEPITAGAKLATLPPPSQVLAFRDTKTSVVLQWDKLKDGLEPLGYYIYCRETGTEGWQTVNNKPVTCNEFTVPGLQPGKEYVFCVKSVSEAGLSESSPETDPIVVRPAIARPSAPRGFVLLSCGKSEMTIGWKPPKRRGGTKLLGYFLDQHDTSELDWHEVNIQPIPQRVYTVGNLKEGHLYEFRACAVNMAGVGEVSEPSDAFKCEEWTMPEPGPPYDVKFTEVRDSSLMLHWQAPLYTGAGPVTGYYVDVCEEGSEEWKQINKQPVATTHMKVSDLETGKCFIFRVRALNKAGIGPPSLPSDPVVAKTKPGTNEIELGVDEEGLIYMAFEAPEKNDSSEFIWSKDYEGPPDADRVRTEEKGNKSKLILTNPSEKDLGVYSVEVTDVDEDISASCTLTKEDLDKLLKRSHEIRNPLIKLISGWNVDVLEKGEVRLWLEVEKLSPNAELHLIFNEKELKSTPTHKINFVKGKGLVELIIQNFCDDDKGMYTAQLQDGKAKNQFTLVLLDERFAKVAEEADAKRREWKKKQGPYFIENLRWKVTESCEVLLTCKATNLRKDTSFQWFFNKKARTGGVFDPQTGIGTLCVKKITKADEGQYKALVSDDRGEDYTQLDLTKGSFEDLLKELCRISALSASPLKIQPTEEGIKIYTDVKYYTDYMKTTWYHKEKQVESRDRLKAGSTMNQIWLHILNPTDADKGKYVLELFDGNDTHKLSTDLSGQAFEDALAEHRRLKEAAVAEKCRARVVQGLPDVATIMEDKTLCLTCCVSGDPYPEITWFKNEKVIVFKDRYKMDVKGTVVTITIEKVCNEDTGKYSIYVKNKYGSETGQVTISVYKHGEIPVGTDEKTQVETVMRKPK
SIO_010081: MYOM3
subclass of: SO_0000673
so part of: MYOM3
location: join(487447..487527,487769..487926,488728..488823,489249..489337,490520..490564,490765..490905,491469..491630,491915..492056,492149..492348,492680..492733,493062..493189,494058..494241,495126..495300,495940..496061,496731..496918,497094..497220,497715..497893,497970..498084,498302..498458,498809..498918,499416..499460,499590..499726,501362..501506,502724..502783,503469..503536,503825..503935,504563..504650,504981..505019,505442..505547,506438..506601,507219..507255,507381..507403,507494..507549,508243..508539)
location: region:487447-508539:1
so has part: feature:487447-487527:1:exon
so has part: feature:487769-487926:1:exon
so has part: feature:488728-488823:1:exon
so has part: feature:489249-489337:1:exon
so has part: feature:490520-490564:1:exon
so has part: feature:490765-490905:1:exon
so has part: feature:491469-491630:1:exon
so has part: feature:491915-492056:1:exon
so has part: feature:492149-492348:1:exon
so has part: feature:492680-492733:1:exon
so has part: feature:493062-493189:1:exon
so has part: feature:494058-494241:1:exon
so has part: feature:495126-495300:1:exon
so has part: feature:495940-496061:1:exon
so has part: feature:496731-496918:1:exon
so has part: feature:497094-497220:1:exon
so has part: feature:497715-497893:1:exon
so has part: feature:497970-498084:1:exon
so has part: feature:498302-498458:1:exon
so has part: feature:498809-498918:1:exon
so has part: feature:499416-499460:1:exon
so has part: feature:499590-499726:1:exon
so has part: feature:501362-501506:1:exon
so has part: feature:502724-502783:1:exon
so has part: feature:503469-503536:1:exon
so has part: feature:503825-503935:1:exon
so has part: feature:504563-504650:1:exon
so has part: feature:504981-505019:1:exon
so has part: feature:505442-505547:1:exon
so has part: feature:506438-506601:1:exon
so has part: feature:507219-507255:1:exon
so has part: feature:507381-507403:1:exon
so has part: feature:507494-507549:1:exon
so has part: feature:508243-508539:1:exon

XP_038023277.1
type: Protein
SIO_000068: ncbiprotein

position:487447:1
position: 487447
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:508539:1
position: 508539
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:487447-487527:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:487769-487926:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:488728-488823:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:489249-489337:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:490520-490564:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:490765-490905:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:491469-491630:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:491915-492056:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:492149-492348:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:492680-492733:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:493062-493189:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:494058-494241:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:495126-495300:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:495940-496061:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:496731-496918:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:497094-497220:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:497715-497893:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:497970-498084:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:498302-498458:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:498809-498918:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:499416-499460:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:499590-499726:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:501362-501506:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:502724-502783:1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:503469-503536:1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:503825-503935:1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:504563-504650:1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:504981-505019:1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:505442-505547:1:exon

urn:…
SIO_000300: 30
SIO_000628: feature:506438-506601:1:exon

urn:…
SIO_000300: 31
SIO_000628: feature:507219-507255:1:exon

urn:…
SIO_000300: 32
SIO_000628: feature:507381-507403:1:exon

urn:…
SIO_000300: 33
SIO_000628: feature:507494-507549:1:exon

urn:…
SIO_000300: 34
SIO_000628: feature:508243-508539:1:exon

MYOM3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8839
gene: MYOM3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: myomesin-3
translation: MEKLEKEVIRNCRLLRVRADRKALRRKAVEKAQMEKDYIELRSGRPPMFWIPLRVHAVWERMEVTLACTVLASPPPQVTWYKNGVPIDLRLAPAGKYKIKNKFGMLTLQISRCSMEDSAEYSVEIKNQYGEAYSFATVLVRKYYGKESGFDSEIYRRSLIAREADFAFSMKPLFSREKEPFTLSCYFSSDLLEHQRDIAWFRDGELLQNSECHKLKYQDREASLTVSCAHKEDEGFYTIRVPSLDGYKEQTTYVFVRDAAAETPGAPGSPLNVKCHDVNKDCLILSWVAPSDNGGSPILGYFIERCVAGSEEWVPCNDRPVKTCRYPVLGLTEGQTYQFRVKAVNKAGISHPSKASAPVTTYDPSKDKRVTVIPYDEGRKIEIFKDDLEGHIKVPLPPTNVHASEVREYYVALAWDEPDPRGREPLNYYVEKSIVGSNSWQMVNLDTPVNSPRFALFDLVKGKSYCFRVRSVNKYGISEPSLPSEPITAGAKLATLPPPSQVLAFRDTKTSVVLQWDKLKDGLEPLGYYIYCRETGTEGWQTVNNKPVTCNEFTVPGLQPGKEYVFCVKSVSEAGLSESSPETDPIVVRPAIARPSAPRGFVLLSCGKSEMTIGWKPPKRRGGTKLLGYFLDQHDTSELDWHEVNIQPIPQRVYTVGNLKEGHLYEFRACAVNMAGVGEVSEPSDAFKCEEWTMPEPGPPYDVKFTEVRDSSLMLHWQAPLYTGAGPVTGYYVDVCEEGSEEWKQINKQPVATTHMKVSDLETGKCFIFRVRALNKAGIGPPSLPSDPVVAKTKPGTNEIELGVDEEGLIYMAFEAPEKNDSSEFIWSKDYEGPPDADRVRTEEKGNKSKLILTNPSEKDLGVYSVEVTDVDEDISASCTLTKEDLDKLLKRSHEIRNPLIKLISGWNVDVLEKGEVRLWLEVEKLSPNAELHLIFNEKELKSTPTHKINFVKGKGLVELIIQNFCDDDKGMYTAQLQDGKAKNQFTLVLLDERFAKVAEEADAKRREWKKKQGPYFIENLRWKVTESCEVLLTCKATNLRKDTSFQWFFNKKARTGGVFDPQTGIGTLCVKKITKADEGQYKALVSDDRGEDYTQLDLTKGSFEDLLKELCRISALSASPLKIQPTEEGIKIYTDVKYYTDYMKTTWYHKEKQVESRDRLKAGSTMNQIWLHILNPTDADKGKYVLELFDGNDTHKLSTDLSGQAFEDALAEHRRLKEAAVAEKCRARVVQGLPDVATIMEDKTLCLTCCVSGDPYPEITWFKNEKVIVFKDRYKMDVKGTVVTITIEKVCNEDTGKYSIYVKNKYGSETGQVTISVYKHGEIPVGTDEKTQVETVMRKPK
SIO_010081: MYOM3
subclass of: SO_0000673
so part of: MYOM3
location: join(487447..487527,487769..487926,488728..488823,489249..489337,490520..490564,490765..490905,491469..491630,491915..492056,492149..492348,492680..492733,493062..493189,494058..494241,495126..495300,495940..496061,496731..496918,497094..497220,497715..497893,497970..498084,498302..498458,498809..498918,499416..499460,499590..499726,501362..501506,502724..502783,503469..503536,503825..503935,504563..504650,504981..505019,505442..505547,506438..506601,507219..507255,507381..507403,507494..507549,508243..508539)
location: region:487447-508539:1
so has part: feature:487447-487527:1:exon
so has part: feature:487769-487926:1:exon
so has part: feature:488728-488823:1:exon
so has part: feature:489249-489337:1:exon
so has part: feature:490520-490564:1:exon
so has part: feature:490765-490905:1:exon
so has part: feature:491469-491630:1:exon
so has part: feature:491915-492056:1:exon
so has part: feature:492149-492348:1:exon
so has part: feature:492680-492733:1:exon
so has part: feature:493062-493189:1:exon
so has part: feature:494058-494241:1:exon
so has part: feature:495126-495300:1:exon
so has part: feature:495940-496061:1:exon
so has part: feature:496731-496918:1:exon
so has part: feature:497094-497220:1:exon
so has part: feature:497715-497893:1:exon
so has part: feature:497970-498084:1:exon
so has part: feature:498302-498458:1:exon
so has part: feature:498809-498918:1:exon
so has part: feature:499416-499460:1:exon
so has part: feature:499590-499726:1:exon
so has part: feature:501362-501506:1:exon
so has part: feature:502724-502783:1:exon
so has part: feature:503469-503536:1:exon
so has part: feature:503825-503935:1:exon
so has part: feature:504563-504650:1:exon
so has part: feature:504981-505019:1:exon
so has part: feature:505442-505547:1:exon
so has part: feature:506438-506601:1:exon
so has part: feature:507219-507255:1:exon
so has part: feature:507381-507403:1:exon
so has part: feature:507494-507549:1:exon
so has part: feature:508243-508539:1:exon

XP_038023278.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:487447-487527:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:487769-487926:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:488728-488823:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:489249-489337:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:490520-490564:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:490765-490905:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:491469-491630:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:491915-492056:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:492149-492348:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:492680-492733:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:493062-493189:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:494058-494241:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:495126-495300:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:495940-496061:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:496731-496918:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:497094-497220:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:497715-497893:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:497970-498084:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:498302-498458:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:498809-498918:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:499416-499460:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:499590-499726:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:501362-501506:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:502724-502783:1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:503469-503536:1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:503825-503935:1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:504563-504650:1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:504981-505019:1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:505442-505547:1:exon

urn:…
SIO_000300: 30
SIO_000628: feature:506438-506601:1:exon

urn:…
SIO_000300: 31
SIO_000628: feature:507219-507255:1:exon

urn:…
SIO_000300: 32
SIO_000628: feature:507381-507403:1:exon

urn:…
SIO_000300: 33
SIO_000628: feature:507494-507549:1:exon

urn:…
SIO_000300: 34
SIO_000628: feature:508243-508539:1:exon

LOC101793493
type: Gene
subclass of: SO_0000704
RO_0002162: 8839
gene: LOC101793493
note: fatty acid-binding protein, liver; Derived by automated computational analysis using gene prediction method: BestRefSeq.
so part of: sequence
location: 510446..512968
location: region:510446-512968:1
so has part: feature:510446-512968:1:exon
subclass of: SO_0000010

101793493
type: Gene
SIO_000068: ncbigene

position:510446:1
position: 510446
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:512968:1
position: 512968
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:510446-512968:1:exon

LOC101793493
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8839
gene: LOC101793493
product: fatty acid-binding protein, liver
inference: similar to RNA sequence, mRNA (same species):RefSeq:NM_001310410.1
exception: annotated by transcript or proteomic data
note: The RefSeq transcript has 4 substitutions compared to this genomic sequence; Derived by automated computational analysis using gene prediction method: BestRefSeq.
transcript id: NM_001310410.1
SIO_010081: LOC101793493
subclass of: SO_0000673
so part of: LOC101793493
location: join(510446..510563,511556..511728,512021..512110,512858..512968)
location: region:510446-512968:1
so has part: feature:510446-510563:1:exon
so has part: feature:511556-511728:1:exon
so has part: feature:512021-512110:1:exon
so has part: feature:512858-512968:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:510446-510563:1:exon

position:510563:1
position: 510563
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:511556-511728:1:exon

position:511556:1
position: 511556
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:511728:1
position: 511728
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:512021-512110:1:exon

position:512021:1
position: 512021
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:512110:1
position: 512110
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:512858-512968:1:exon

position:512858:1
position: 512858
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC101793493
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8839
gene: LOC101793493
inference: similar to AA sequence (same species):RefSeq:NP_001297339.1
exception: annotated by transcript or proteomic data
note: The RefSeq protein has 2 substitutions compared to this genomic sequence; Derived by automated computational analysis using gene prediction method: BestRefSeq.
codon start: 1
product: fatty acid-binding protein, liver
translation: MAFSGTWQVYAQENYEEFLKALALSEDIIKVARDIKPVVEIQQKGDDFVVTSKTPKQSVTNSFTLGKEADITTMDGKKLKCTVNLVNGKLVCKSDKFSHEQEVNGNEMVETITFGGVTLVRRSKRV
SIO_010081: LOC101793493
subclass of: SO_0000673
so part of: LOC101793493
location: join(510497..510563,511556..511728,512021..512110,512858..512908)
location: region:510497-512908:1
so has part: feature:510497-510563:1:exon
so has part: feature:511556-511728:1:exon
so has part: feature:512021-512110:1:exon
so has part: feature:512858-512908:1:exon

NP_001297339.1
type: Protein
SIO_000068: ncbiprotein

position:510497:1
position: 510497
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:512908:1
position: 512908
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:510497-510563:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:511556-511728:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:512021-512110:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:512858-512908:1:exon

SRSF10
type: Gene
subclass of: SO_0000704
RO_0002162: 8839
gene: SRSF10
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 513685..524268
location: region:513685-524268:1
so has part: feature:513685-524268:1:exon
subclass of: SO_0000010

119713585
type: Gene
SIO_000068: ncbigene

position:513685:1
position: 513685
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:524268:1
position: 524268
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:513685-524268:1:exon

SRSF10
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8839
gene: SRSF10
product: serine and arginine rich splicing factor 10, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 126 samples with support for all annotated introns
transcript id: XM_038167184.1
SIO_010081: SRSF10
subclass of: SO_0000673
so part of: SRSF10
location: join(513685..513957,515604..515708,517394..517497,519165..519327,519639..519689,519861..522080)
location: region:513685-522080:1
so has part: feature:513685-513957:1:exon
so has part: feature:515604-515708:1:exon
so has part: feature:517394-517497:1:exon
so has part: feature:519165-519327:1:exon
so has part: feature:519639-519689:1:exon
so has part: feature:519861-522080:1:exon

position:522080:1
position: 522080
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:513685-513957:1:exon

position:513957:1
position: 513957
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:515604-515708:1:exon

position:515604:1
position: 515604
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:515708:1
position: 515708
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:517394-517497:1:exon

position:517394:1
position: 517394
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:517497:1
position: 517497
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:519165-519327:1:exon

position:519165:1
position: 519165
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:519327:1
position: 519327
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:519639-519689:1:exon

position:519639:1
position: 519639
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:519689:1
position: 519689
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:519861-522080:1:exon

position:519861:1
position: 519861
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

SRSF10
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8839
gene: SRSF10
product: serine and arginine rich splicing factor 10, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 13 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 126 samples with support for all annotated introns
transcript id: XM_038167183.1
SIO_010081: SRSF10
subclass of: SO_0000673
so part of: SRSF10
location: join(513688..513957,515604..515708,517394..517497,519165..519327,519636..519689,519861..522080)
location: region:513688-522080:1
so has part: feature:513688-513957:1:exon
so has part: feature:515604-515708:1:exon
so has part: feature:517394-517497:1:exon
so has part: feature:519165-519327:1:exon
so has part: feature:519636-519689:1:exon
so has part: feature:519861-522080:1:exon

position:513688:1
position: 513688
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:513688-513957:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:515604-515708:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:517394-517497:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:519165-519327:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:519636-519689:1:exon

position:519636:1
position: 519636
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:519861-522080:1:exon

SRSF10
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8839
gene: SRSF10
product: serine and arginine rich splicing factor 10, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 126 samples with support for all annotated introns
transcript id: XM_038167185.1
SIO_010081: SRSF10
subclass of: SO_0000673
so part of: SRSF10
location: join(513690..513957,515604..515708,517394..517497,519165..519327,519636..519689,519861..519962,523058..524268)
location: region:513690-524268:1
so has part: feature:513690-513957:1:exon
so has part: feature:515604-515708:1:exon
so has part: feature:517394-517497:1:exon
so has part: feature:519165-519327:1:exon
so has part: feature:519636-519689:1:exon
so has part: feature:519861-519962:1:exon
so has part: feature:523058-524268:1:exon

position:513690:1
position: 513690
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:513690-513957:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:515604-515708:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:517394-517497:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:519165-519327:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:519636-519689:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:519861-519962:1:exon

position:519962:1
position: 519962
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:523058-524268:1:exon

position:523058:1
position: 523058
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

SRSF10
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8839
gene: SRSF10
product: serine and arginine rich splicing factor 10, transcript variant X5
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 126 samples with support for all annotated introns
transcript id: XM_038167187.1
SIO_010081: SRSF10
subclass of: SO_0000673
so part of: SRSF10
location: join(513692..513957,515604..515708,517394..517497,519165..519327,519639..519689,523058..524268)
location: region:513692-524268:1
so has part: feature:513692-513957:1:exon
so has part: feature:515604-515708:1:exon
so has part: feature:517394-517497:1:exon
so has part: feature:519165-519327:1:exon
so has part: feature:519639-519689:1:exon
so has part: feature:523058-524268:1:exon

position:513692:1
position: 513692
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:513692-513957:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:515604-515708:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:517394-517497:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:519165-519327:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:519639-519689:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:523058-524268:1:exon

SRSF10
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8839
gene: SRSF10
product: serine and arginine rich splicing factor 10, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 126 samples with support for all annotated introns
transcript id: XM_038167186.1
SIO_010081: SRSF10
subclass of: SO_0000673
so part of: SRSF10
location: join(513696..513957,515604..515708,517394..517497,519165..519327,519636..519689,523058..524268)
location: region:513696-524268:1
so has part: feature:513696-513957:1:exon
so has part: feature:515604-515708:1:exon
so has part: feature:517394-517497:1:exon
so has part: feature:519165-519327:1:exon
so has part: feature:519636-519689:1:exon
so has part: feature:523058-524268:1:exon

position:513696:1
position: 513696
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:513696-513957:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:515604-515708:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:517394-517497:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:519165-519327:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:519636-519689:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:523058-524268:1:exon

SRSF10
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8839
gene: SRSF10
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: serine/arginine-rich splicing factor 10 isoform X3
translation: MSRYLRPPNTSLFVRNVADDTRSEDLRREFGRYGPIVDVYVPLDFYTRRPRGFAYVQFEDVRDAEDALHNLDRKWICGRQIEIQFAQGDRKTPNQMKAKEGRNLYSSSRYDDYDRYRRSRSRSYERRRSRSRSFDYSYRRSYSPRNSRPTGRPRRSRSHSDNDRFKHRNRSFSRSKSNSRSRSKSQPKKEMKAKSRSRGRTKL
SIO_010081: SRSF10
subclass of: SO_0000673
so part of: SRSF10
location: join(513893..513957,515604..515708,517394..517497,519165..519327,519636..519689,519861..519962,523058..523076)
location: region:513893-523076:1
so has part: feature:513893-513957:1:exon
so has part: feature:515604-515708:1:exon
so has part: feature:517394-517497:1:exon
so has part: feature:519165-519327:1:exon
so has part: feature:519636-519689:1:exon
so has part: feature:519861-519962:1:exon
so has part: feature:523058-523076:1:exon

XP_038023113.1
type: Protein
SIO_000068: ncbiprotein

position:513893:1
position: 513893
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:523076:1
position: 523076
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:513893-513957:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:515604-515708:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:517394-517497:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:519165-519327:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:519636-519689:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:519861-519962:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:523058-523076:1:exon

SRSF10
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8839
gene: SRSF10
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: serine/arginine-rich splicing factor 10 isoform X4
translation: MSRYLRPPNTSLFVRNVADDTRSEDLRREFGRYGPIVDVYVPLDFYTRRPRGFAYVQFEDVRDAEDALHNLDRKWICGRQIEIQFAQGDRKTPNQMKAKEGRNLYSSSRYDDYDRYRRSRSRSYERRRSRSRSFDYSYRRSYSPRNSRPTGRPRRSRSHSDNDRGRTKL
SIO_010081: SRSF10
subclass of: SO_0000673
so part of: SRSF10
location: join(513893..513957,515604..515708,517394..517497,519165..519327,519636..519689,523058..523076)
location: region:513893-523076:1
so has part: feature:513893-513957:1:exon
so has part: feature:515604-515708:1:exon
so has part: feature:517394-517497:1:exon
so has part: feature:519165-519327:1:exon
so has part: feature:519636-519689:1:exon
so has part: feature:523058-523076:1:exon

XP_038023114.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:513893-513957:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:515604-515708:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:517394-517497:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:519165-519327:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:519636-519689:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:523058-523076:1:exon

SRSF10
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8839
gene: SRSF10
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: serine/arginine-rich splicing factor 10 isoform X5
translation: MSRYLRPPNTSLFVRNVADDTRSEDLRREFGRYGPIVDVYVPLDFYTRRPRGFAYVQFEDVRDAEDALHNLDRKWICGRQIEIQFAQGDRKTPNQMKAKEGRNLYSSSRYDDYDRYRRSRSRSYERRRSRSRSFDYSYRRSYSPRNRPTGRPRRSRSHSDNDRGRTKL
SIO_010081: SRSF10
subclass of: SO_0000673
so part of: SRSF10
location: join(513893..513957,515604..515708,517394..517497,519165..519327,519639..519689,523058..523076)
location: region:513893-523076:1
so has part: feature:513893-513957:1:exon
so has part: feature:515604-515708:1:exon
so has part: feature:517394-517497:1:exon
so has part: feature:519165-519327:1:exon
so has part: feature:519639-519689:1:exon
so has part: feature:523058-523076:1:exon

XP_038023115.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:513893-513957:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:515604-515708:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:517394-517497:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:519165-519327:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:519639-519689:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:523058-523076:1:exon

SRSF10
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8839
gene: SRSF10
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: serine/arginine-rich splicing factor 10 isoform X1
translation: MSRYLRPPNTSLFVRNVADDTRSEDLRREFGRYGPIVDVYVPLDFYTRRPRGFAYVQFEDVRDAEDALHNLDRKWICGRQIEIQFAQGDRKTPNQMKAKEGRNLYSSSRYDDYDRYRRSRSRSYERRRSRSRSFDYSYRRSYSPRNSRPTGRPRRSRSHSDNDRFKHRNRSFSRSKSNSRSRSKSQPKKEMKAKSRSRSASHTKSRGTSKTDSKTHYKSSSRYEKESRKKEPARSKSQSRSHSRSRSKSRSRSWTSPKSSGH
SIO_010081: SRSF10
subclass of: SO_0000673
so part of: SRSF10
location: join(513893..513957,515604..515708,517394..517497,519165..519327,519636..519689,519861..520158)
location: region:513893-520158:1
so has part: feature:513893-513957:1:exon
so has part: feature:515604-515708:1:exon
so has part: feature:517394-517497:1:exon
so has part: feature:519165-519327:1:exon
so has part: feature:519636-519689:1:exon
so has part: feature:519861-520158:1:exon

XP_038023111.1
type: Protein
SIO_000068: ncbiprotein

position:520158:1
position: 520158
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:513893-513957:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:515604-515708:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:517394-517497:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:519165-519327:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:519636-519689:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:519861-520158:1:exon

SRSF10
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8839
gene: SRSF10
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: serine/arginine-rich splicing factor 10 isoform X2
translation: MSRYLRPPNTSLFVRNVADDTRSEDLRREFGRYGPIVDVYVPLDFYTRRPRGFAYVQFEDVRDAEDALHNLDRKWICGRQIEIQFAQGDRKTPNQMKAKEGRNLYSSSRYDDYDRYRRSRSRSYERRRSRSRSFDYSYRRSYSPRNRPTGRPRRSRSHSDNDRFKHRNRSFSRSKSNSRSRSKSQPKKEMKAKSRSRSASHTKSRGTSKTDSKTHYKSSSRYEKESRKKEPARSKSQSRSHSRSRSKSRSRSWTSPKSSGH
SIO_010081: SRSF10
subclass of: SO_0000673
so part of: SRSF10
location: join(513893..513957,515604..515708,517394..517497,519165..519327,519639..519689,519861..520158)
location: region:513893-520158:1
so has part: feature:513893-513957:1:exon
so has part: feature:515604-515708:1:exon
so has part: feature:517394-517497:1:exon
so has part: feature:519165-519327:1:exon
so has part: feature:519639-519689:1:exon
so has part: feature:519861-520158:1:exon

XP_038023112.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:513893-513957:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:515604-515708:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:517394-517497:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:519165-519327:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:519639-519689:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:519861-520158:1:exon

PNRC2
type: Gene
subclass of: SO_0000704
RO_0002162: 8839
gene: PNRC2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(524804..528855)
location: region:524804-528855:-1
so has part: feature:524804-528855:-1:exon
subclass of: SO_0000010

119713586
type: Gene
SIO_000068: ncbigene

position:524804:-1
position: 524804
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:528855:-1
position: 528855
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:524804-528855:-1:exon

PNRC2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8839
gene: PNRC2
product: proline rich nuclear receptor coactivator 2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 126 samples with support for all annotated introns
transcript id: XM_038167188.1
SIO_010081: PNRC2
subclass of: SO_0000673
so part of: PNRC2
location: complement(join(524804..526954,527734..527939,528693..528855))
location: region:524804-528855:-1
so has part: feature:528693-528855:-1:exon
so has part: feature:527734-527939:-1:exon
so has part: feature:524804-526954:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:528693-528855:-1:exon

position:528693:-1
position: 528693
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:527734-527939:-1:exon

position:527734:-1
position: 527734
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:527939:-1
position: 527939
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:524804-526954:-1:exon

position:526954:-1
position: 526954
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

PNRC2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8839
gene: PNRC2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: proline-rich nuclear receptor coactivator 2
translation: MGGGERFSIPAPQSRNITKNHQQLKNRQKSKDQNSQMKMNHMKKERGHGCNSSSGAWQAMQKGGKNNAHFPKNQNRSPNLSNRNLFFTPQTNQNYAGAKFSEPPSPSVLPKPPSHWVPVSFKPSDKEMMTFQLKTLLKVQA
SIO_010081: PNRC2
subclass of: SO_0000673
so part of: PNRC2
location: complement(526511..526936)
location: region:526511-526936:-1
so has part: feature:526511-526936:-1:exon

XP_038023116.1
type: Protein
SIO_000068: ncbiprotein

position:526511:-1
position: 526511
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:526936:-1
position: 526936
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:526511-526936:-1:exon

CNR2
type: Gene
subclass of: SO_0000704
RO_0002162: 8839
gene: CNR2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 531092..536057
location: region:531092-536057:1
so has part: feature:531092-536057:1:exon
subclass of: SO_0000010

119713619
type: Gene
SIO_000068: ncbigene

position:531092:1
position: 531092
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:536057:1
position: 536057
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:531092-536057:1:exon

CNR2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8839
gene: CNR2
product: cannabinoid receptor 2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 17 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 68 samples with support for all annotated introns
transcript id: XM_038167317.1
SIO_010081: CNR2
subclass of: SO_0000673
so part of: CNR2
location: join(531092..531615,534171..536057)
location: region:531092-536057:1
so has part: feature:531092-531615:1:exon
so has part: feature:534171-536057:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:531092-531615:1:exon

position:531615:1
position: 531615
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:534171-536057:1:exon

position:534171:1
position: 534171
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC119713625
type: Gene
subclass of: SO_0000704
RO_0002162: 8839
gene: LOC119713625
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(531579..543036)
location: region:531579-543036:-1
so has part: feature:531579-543036:-1:exon
subclass of: SO_0000011

119713625
type: Gene
SIO_000068: ncbigene

position:531579:-1
position: 531579
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:543036:-1
position: 543036
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:531579-543036:-1:exon

LOC119713625
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 8839
nc RNA class: lncRNA
gene: LOC119713625
product: uncharacterized LOC119713625
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 24 samples with support for all annotated introns
transcript id: XR_005260837.1
SIO_010081: LOC119713625
subclass of: SO_0000673
so part of: LOC119713625
location: complement(join(531579..531909,542900..543036))
location: region:531579-543036:-1
so has part: feature:542900-543036:-1:exon
so has part: feature:531579-531909:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:542900-543036:-1:exon

position:542900:-1
position: 542900
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:531579-531909:-1:exon

position:531909:-1
position: 531909
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

CNR2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8839
gene: CNR2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: cannabinoid receptor 2
translation: MDICKTFENASKCSVNGTPMECFMVLSTQAQKISIATLCGLFGTLCIFENSVVLYLIFSSPGTRRKPSYIFISSLALADLLASIIFVSSFVNFHVLNGTDSSKELFLLKLGGVNTSFTASLSSLLLTALDRYVSISRPSEYKLLVTRKRAWAALGVLWAMCVTTASLPILGWNCCTLNSTCSELFPFVDDNYLSSWVCLVMALLGCIVYAYAHVLWRAHQHVAYMGKHQAQVGKQNSRMRMDVMLAKTLVMVLTVLVLCWSPVLILMIYSIFTKLTNHLRKVFAFCSTLCLLNSMVNPIIYALRSKELFSSLRAVFFRFKRRLRGTDDSPEGDSGHKSSVAETVCEDDVHVT
SIO_010081: CNR2
subclass of: SO_0000673
so part of: CNR2
location: 534235..535293
location: region:534235-535293:1
so has part: feature:534235-535293:1:exon

XP_038023245.1
type: Protein
SIO_000068: ncbiprotein

position:534235:1
position: 534235
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:535293:1
position: 535293
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:534235-535293:1:exon

FUCA1
type: Gene
subclass of: SO_0000704
RO_0002162: 8839
gene: FUCA1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 536337..541419
location: region:536337-541419:1
so has part: feature:536337-541419:1:exon
subclass of: SO_0000010

119713617
type: Gene
SIO_000068: ncbigene

position:536337:1
position: 536337
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:541419:1
position: 541419
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:536337-541419:1:exon

FUCA1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8839
gene: FUCA1
product: alpha-L-fucosidase 1
exception: unclassified transcription discrepancy
note: The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: deleted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 14 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments, including 125 samples with support for all annotated introns
transcript id: XM_038167315.1
SIO_010081: FUCA1
subclass of: SO_0000673
so part of: FUCA1
location: join(536337..536745,537205..537339,537571..537708,538380..538485,538949..539149,539360..539547,540388..540487,541166..541419)
location: region:536337-541419:1
so has part: feature:536337-536745:1:exon
so has part: feature:537205-537339:1:exon
so has part: feature:537571-537708:1:exon
so has part: feature:538380-538485:1:exon
so has part: feature:538949-539149:1:exon
so has part: feature:539360-539547:1:exon
so has part: feature:540388-540487:1:exon
so has part: feature:541166-541419:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:536337-536745:1:exon

position:536745:1
position: 536745
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:537205-537339:1:exon

position:537205:1
position: 537205
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:537339:1
position: 537339
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:537571-537708:1:exon

position:537571:1
position: 537571
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:537708:1
position: 537708
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:538380-538485:1:exon

position:538380:1
position: 538380
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:538485:1
position: 538485
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:538949-539149:1:exon

position:538949:1
position: 538949
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:539149:1
position: 539149
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:539360-539547:1:exon

position:539360:1
position: 539360
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:539547:1
position: 539547
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:540388-540487:1:exon

position:540388:1
position: 540388
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:540487:1
position: 540487
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:541166-541419:1:exon

position:541166:1
position: 541166
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

FUCA1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8839
gene: FUCA1
exception: unclassified translation discrepancy
note: The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: deleted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: LOW QUALITY PROTEIN: tissue alpha-L-fucosidase
translation: MGMAAGPLLWLAAALGPAAAAGRYSPDWGSLDARPLPAWFDRAKVGVFVHWGVFSVPAWGSEWFWWHWRGEHRADYERFVRQRYPPRTDYADFAPRFTAHDFQPRRWARLFQRAGARYVVLTTKHHEGFTNWGSPVSWNWNSVDTGPHRDLVGELGQALRESNIRYGLYHSLLEWFNPLYLADKESGFKTQNFVLKKTMPELYDLVLKYKPDLIWSDGDWEAPDSYWNSTSFLAWLYNDSPVKDTVVVNDRWCNNCSCHHGGYYNCADKYKPGTLPAHKWEMCSSIDKLSWGYRSNMHIDELMDEASIIEELVKTVSFGGNYLLNVGPTKEGVIAPIFEERLLALGRWLDTNGEAIYESKPWRVQVEDTGTVWYTSKGPVVYAIFLVWPQDNVLQLSSPTPSPATQVSMLGFAGALQWQKAPGKGLLVTLPPLPPSPLSTQPGWALRLQGVQ
SIO_010081: FUCA1
subclass of: SO_0000673
so part of: FUCA1
location: join(536396..536745,537205..537339,537571..537708,538380..538485,538949..539149,539360..539547,540388..540487,541166..541307)
location: region:536396-541307:1
so has part: feature:536396-536745:1:exon
so has part: feature:537205-537339:1:exon
so has part: feature:537571-537708:1:exon
so has part: feature:538380-538485:1:exon
so has part: feature:538949-539149:1:exon
so has part: feature:539360-539547:1:exon
so has part: feature:540388-540487:1:exon
so has part: feature:541166-541307:1:exon

XP_038023243.1
type: Protein
SIO_000068: ncbiprotein

position:536396:1
position: 536396
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:541307:1
position: 541307
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:536396-536745:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:537205-537339:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:537571-537708:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:538380-538485:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:538949-539149:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:539360-539547:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:540388-540487:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:541166-541307:1:exon

HMGCL
type: Gene
subclass of: SO_0000704
RO_0002162: 8839
gene: HMGCL
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 541688..545397
location: region:541688-545397:1
so has part: feature:541688-545397:1:exon
subclass of: SO_0000010

119713620
type: Gene
SIO_000068: ncbigene

position:541688:1
position: 541688
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:545397:1
position: 545397
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:541688-545397:1:exon

HMGCL
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8839
gene: HMGCL
product: 3-hydroxy-3-methylglutaryl-CoA lyase
exception: unclassified transcription discrepancy
note: The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: deleted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 97% coverage of the annotated genomic feature by RNAseq alignments, including 63 samples with support for all annotated introns
transcript id: XM_038167318.1
SIO_010081: HMGCL
subclass of: SO_0000673
so part of: HMGCL
location: join(541688..541932,542296..542379,542460..542568,542962..543057,543449..543597,543722..543785,544114..544302,544440..544565,544881..545397)
location: region:541688-545397:1
so has part: feature:541688-541932:1:exon
so has part: feature:542296-542379:1:exon
so has part: feature:542460-542568:1:exon
so has part: feature:542962-543057:1:exon
so has part: feature:543449-543597:1:exon
so has part: feature:543722-543785:1:exon
so has part: feature:544114-544302:1:exon
so has part: feature:544440-544565:1:exon
so has part: feature:544881-545397:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:541688-541932:1:exon

position:541932:1
position: 541932
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:542296-542379:1:exon

position:542296:1
position: 542296
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:542379:1
position: 542379
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:542460-542568:1:exon

position:542460:1
position: 542460
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:542568:1
position: 542568
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:542962-543057:1:exon

position:542962:1
position: 542962
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:543057:1
position: 543057
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:543449-543597:1:exon

position:543449:1
position: 543449
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:543597:1
position: 543597
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:543722-543785:1:exon

position:543722:1
position: 543722
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:543785:1
position: 543785
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:544114-544302:1:exon

position:544114:1
position: 544114
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:544302:1
position: 544302
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:544440-544565:1:exon

position:544440:1
position: 544440
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:544565:1
position: 544565
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:544881-545397:1:exon

position:544881:1
position: 544881
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

HMGCL
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8839
gene: HMGCL
exception: unclassified translation discrepancy
note: The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: deleted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: LOW QUALITY PROTEIN: hydroxymethylglutaryl-CoA lyase, mitochondrial
translation: MPLCPVPPPPREAARGQISAAAAGALPARVKVVEVGPRDGLQNEQSIVPTQVKIGLIDMLSHTGLPVIEATSFVSPRWVPQMADHTEVMQGIKKLPGVSYPVLTPNLKGFQAAVAAGAKEVSIFGAASELFTKKNINCSIEESLERFSEVMSAARAASIPVRGYVSCVLGCPYEGKISAAKVAEVSKKMYSMGCYEISLGDTIGIGTPGSMREMLTAVMKEVPVGALAVHCHDTYGQALANILVALQMGVSVVDASVAGLGGCPYAKGASGNVATEDLVYMLNGLGIHTGVDLQKLMDTGTFICNALNRRTNSKVSQASCRL
SIO_010081: HMGCL
subclass of: SO_0000673
so part of: HMGCL
location: join(541882..541932,542296..542379,542460..542568,542962..543057,543449..543597,543722..543785,544114..544302,544440..544565,544881..544982)
location: region:541882-544982:1
so has part: feature:541882-541932:1:exon
so has part: feature:542296-542379:1:exon
so has part: feature:542460-542568:1:exon
so has part: feature:542962-543057:1:exon
so has part: feature:543449-543597:1:exon
so has part: feature:543722-543785:1:exon
so has part: feature:544114-544302:1:exon
so has part: feature:544440-544565:1:exon
so has part: feature:544881-544982:1:exon

XP_038023246.1
type: Protein
SIO_000068: ncbiprotein

position:541882:1
position: 541882
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:544982:1
position: 544982
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:541882-541932:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:542296-542379:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:542460-542568:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:542962-543057:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:543449-543597:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:543722-543785:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:544114-544302:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:544440-544565:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:544881-544982:1:exon

GALE
type: Gene
subclass of: SO_0000704
RO_0002162: 8839
gene: GALE
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 545655..548632
location: region:545655-548632:1
so has part: feature:545655-548632:1:exon
subclass of: SO_0000010

119713618
type: Gene
SIO_000068: ncbigene

position:545655:1
position: 545655
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:548632:1
position: 548632
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:545655-548632:1:exon

GALE
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8839
gene: GALE
product: UDP-galactose-4-epimerase
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 13 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 126 samples with support for all annotated introns
transcript id: XM_038167316.1
SIO_010081: GALE
subclass of: SO_0000673
so part of: GALE
location: join(545655..545897,546463..546578,546802..546915,546993..547169,547269..547449,547532..547617,547737..547814,547931..548045,548134..548632)
location: region:545655-548632:1
so has part: feature:545655-545897:1:exon
so has part: feature:546463-546578:1:exon
so has part: feature:546802-546915:1:exon
so has part: feature:546993-547169:1:exon
so has part: feature:547269-547449:1:exon
so has part: feature:547532-547617:1:exon
so has part: feature:547737-547814:1:exon
so has part: feature:547931-548045:1:exon
so has part: feature:548134-548632:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:545655-545897:1:exon

position:545897:1
position: 545897
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:546463-546578:1:exon

position:546463:1
position: 546463
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:546578:1
position: 546578
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:546802-546915:1:exon

position:546802:1
position: 546802
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:546915:1
position: 546915
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:546993-547169:1:exon

position:546993:1
position: 546993
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:547169:1
position: 547169
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:547269-547449:1:exon

position:547269:1
position: 547269
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:547449:1
position: 547449
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:547532-547617:1:exon

position:547532:1
position: 547532
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:547617:1
position: 547617
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:547737-547814:1:exon

position:547737:1
position: 547737
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:547814:1
position: 547814
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:547931-548045:1:exon

position:547931:1
position: 547931
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:548045:1
position: 548045
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:548134-548632:1:exon

position:548134:1
position: 548134
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

GALE
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8839
gene: GALE
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: UDP-glucose 4-epimerase
translation: MAGPVLVTGGAGFIGSHCVLQLAQAGYEPVVVDNLHNAIAGPDGLPESLRRVQVLARRPIAFQQLDVTDGAALQELFSKHRFSAVVHFAGLKAVGESVQQPLEYYRVNLTGTIRLLEAMKAHGVKNIVFSSSATVYGDPKYLPLDENHPVGGCTNPYGKSKYFIEEMIRDLCKADKDWNAVILRYFNPIGAHESGMIGEDPQGIPNNLMPYVAQVAVGRREFLSVFGNDYETIDGTGVRDYIHVVDLAKGHIAALQKLKENCGCKVYNLGTGTGYSVLQMVRAMEKASGREIKYKITARREGDVASCYANPELAERELGWKAAFGLDKMCEDLWRWQLQNPTGFSKN
SIO_010081: GALE
subclass of: SO_0000673
so part of: GALE
location: join(545777..545897,546463..546578,546802..546915,546993..547169,547269..547449,547532..547617,547737..547814,547931..548045,548134..548189)
location: region:545777-548189:1
so has part: feature:545777-545897:1:exon
so has part: feature:546463-546578:1:exon
so has part: feature:546802-546915:1:exon
so has part: feature:546993-547169:1:exon
so has part: feature:547269-547449:1:exon
so has part: feature:547532-547617:1:exon
so has part: feature:547737-547814:1:exon
so has part: feature:547931-548045:1:exon
so has part: feature:548134-548189:1:exon

XP_038023244.1
type: Protein
SIO_000068: ncbiprotein

position:545777:1
position: 545777
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:548189:1
position: 548189
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:545777-545897:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:546463-546578:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:546802-546915:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:546993-547169:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:547269-547449:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:547532-547617:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:547737-547814:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:547931-548045:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:548134-548189:1:exon

LOC119713621
type: Gene
subclass of: SO_0000704
RO_0002162: 8839
gene: LOC119713621
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(548514..550237)
location: region:548514-550237:-1
so has part: feature:548514-550237:-1:exon
subclass of: SO_0000010

119713621
type: Gene
SIO_000068: ncbigene

position:548514:-1
position: 548514
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:550237:-1
position: 550237
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:548514-550237:-1:exon

LOC119713621
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8839
gene: LOC119713621
product: basic proline-rich protein-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_038167319.1
SIO_010081: LOC119713621
subclass of: SO_0000673
so part of: LOC119713621
location: complement(join(548514..549139,549173..550237))
location: region:548514-550237:-1
so has part: feature:549173-550237:-1:exon
so has part: feature:548514-549139:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:549173-550237:-1:exon

position:549173:-1
position: 549173
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:548514-549139:-1:exon

position:549139:-1
position: 549139
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC119713621
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8839
gene: LOC119713621
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: basic proline-rich protein-like
translation: MPGPRPWPRWLPTNNQGLPGAEPLTQLAGSGRPGWGAVAALGGLQGGSRLPPALPLAAEQCCPSPLLSPPLPGLSPRHRWAPRGWSWKCLLTKIKREKSPPGLGAAALLCPPALGAMPGPCQDQAGTSRGGEGCGGAPALPSPPGRCEAIPPPISWVVLGFVSLGKSQTSKAAAGSGGSTAPPRAGAGGWGLAPPQLCVELLQPRGGGSEGLAGTGPQLPPPPQNPPGTWSRAGTTGGGRLLHFSPPLSSPLLPPPPFFFPPSPPCLPCTCLGFLCVFHSVRHGSINQKPLPAPCPLSPAPSRCPSRRSPHAPRH
SIO_010081: LOC119713621
subclass of: SO_0000673
so part of: LOC119713621
location: complement(join(548642..549139,549173..549622))
location: region:548642-549622:-1
so has part: feature:549173-549622:-1:exon
so has part: feature:548642-549139:-1:exon

XP_038023247.1
type: Protein
SIO_000068: ncbiprotein

position:548642:-1
position: 548642
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:549622:-1
position: 549622
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:549173-549622:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:548642-549139:-1:exon

LYPLA2
type: Gene
subclass of: SO_0000704
RO_0002162: 8839
gene: LYPLA2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(550263..553300)
location: region:550263-553300:-1
so has part: feature:550263-553300:-1:exon
subclass of: SO_0000010

119713622
type: Gene
SIO_000068: ncbigene

position:550263:-1
position: 550263
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:553300:-1
position: 553300
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:550263-553300:-1:exon

LYPLA2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8839
gene: LYPLA2
product: lysophospholipase 2
exception: unclassified transcription discrepancy
note: The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: deleted 2 bases in 2 codons; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 Proteins, and 96% coverage of the annotated genomic feature by RNAseq alignments, including 114 samples with support for all annotated introns
transcript id: XM_038167320.1
SIO_010081: LYPLA2
subclass of: SO_0000673
so part of: LYPLA2
location: complement(join(550263..550463,550557..550734,550871..550972,551061..551134,551220..551290,551457..551504,551687..551752,552283..552314,552717..552822,553175..553300))
location: region:550263-553300:-1
so has part: feature:553175-553300:-1:exon
so has part: feature:552717-552822:-1:exon
so has part: feature:552283-552314:-1:exon
so has part: feature:551687-551752:-1:exon
so has part: feature:551457-551504:-1:exon
so has part: feature:551220-551290:-1:exon
so has part: feature:551061-551134:-1:exon
so has part: feature:550871-550972:-1:exon
so has part: feature:550557-550734:-1:exon
so has part: feature:550263-550463:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:553175-553300:-1:exon

position:553175:-1
position: 553175
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:552717-552822:-1:exon

position:552717:-1
position: 552717
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:552822:-1
position: 552822
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:552283-552314:-1:exon

position:552283:-1
position: 552283
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:552314:-1
position: 552314
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:551687-551752:-1:exon

position:551687:-1
position: 551687
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:551752:-1
position: 551752
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:551457-551504:-1:exon

position:551457:-1
position: 551457
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:551504:-1
position: 551504
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:551220-551290:-1:exon

position:551220:-1
position: 551220
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:551290:-1
position: 551290
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:551061-551134:-1:exon

position:551061:-1
position: 551061
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:551134:-1
position: 551134
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:550871-550972:-1:exon

position:550871:-1
position: 550871
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:550972:-1
position: 550972
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:550557-550734:-1:exon

position:550557:-1
position: 550557
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:550734:-1
position: 550734
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:550263-550463:-1:exon

position:550463:-1
position: 550463
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LYPLA2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8839
gene: LYPLA2
exception: unclassified translation discrepancy
note: The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: deleted 2 bases in 2 codons; Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: LOW QUALITY PROTEIN: acyl-protein thioesterase 2
translation: MCGNNMSVPLLADAVTVSGAERETAAVIFLHGLGDTGHSWADALSSIRLPYVKYICPHAPRIPVTLNMKMVMPSWFDLMGLTPDAPEDEAGIKKAAENIKAIIEHEMKNGIPANRIILGGFSQGGALSLYTALTCQHQLAGIVALSCWLPLHKAFPQAASSGVNKDIAILQCHGELDPMIPVRFGALTAEKLKSVVTPAKVQFKTYPGVMHSSCPQEMLAVKEFIEKLLPRI
SIO_010081: LYPLA2
subclass of: SO_0000673
so part of: LYPLA2
location: complement(join(550412..550463,550557..550734,550871..550972,551061..551134,551220..551290,551457..551504,551687..551752,552283..552314,552717..552794))
location: region:550412-552794:-1
so has part: feature:552717-552794:-1:exon
so has part: feature:552283-552314:-1:exon
so has part: feature:551687-551752:-1:exon
so has part: feature:551457-551504:-1:exon
so has part: feature:551220-551290:-1:exon
so has part: feature:551061-551134:-1:exon
so has part: feature:550871-550972:-1:exon
so has part: feature:550557-550734:-1:exon
so has part: feature:550412-550463:-1:exon

XP_038023248.1
type: Protein
SIO_000068: ncbiprotein

position:550412:-1
position: 550412
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:552794:-1
position: 552794
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:552717-552794:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:552283-552314:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:551687-551752:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:551457-551504:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:551220-551290:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:551061-551134:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:550871-550972:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:550557-550734:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:550412-550463:-1:exon

PITHD1
type: Gene
subclass of: SO_0000704
RO_0002162: 8839
gene: PITHD1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(553404..555964)
location: region:553404-555964:-1
so has part: feature:553404-555964:-1:exon
subclass of: SO_0000010

119713623
type: Gene
SIO_000068: ncbigene

position:553404:-1
position: 553404
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:555964:-1
position: 555964
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:553404-555964:-1:exon

PITHD1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8839
gene: PITHD1
product: PITH domain containing 1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 126 samples with support for all annotated introns
transcript id: XM_038167321.1
SIO_010081: PITHD1
subclass of: SO_0000673
so part of: PITHD1
location: complement(join(553404..553592,553925..554033,554395..554499,555428..555505,555598..555641,555746..555964))
location: region:553404-555964:-1
so has part: feature:555746-555964:-1:exon
so has part: feature:555598-555641:-1:exon
so has part: feature:555428-555505:-1:exon
so has part: feature:554395-554499:-1:exon
so has part: feature:553925-554033:-1:exon
so has part: feature:553404-553592:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:555746-555964:-1:exon

position:555746:-1
position: 555746
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:555598-555641:-1:exon

position:555598:-1
position: 555598
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:555641:-1
position: 555641
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:555428-555505:-1:exon

position:555428:-1
position: 555428
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:555505:-1
position: 555505
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:554395-554499:-1:exon

position:554395:-1
position: 554395
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:554499:-1
position: 554499
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:553925-554033:-1:exon

position:553925:-1
position: 553925
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:554033:-1
position: 554033
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:553404-553592:-1:exon

position:553592:-1
position: 553592
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

PITHD1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8839
gene: PITHD1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: PITH domain-containing protein 1
translation: MAQGPAHGPGRCCCCGAGGVGAGGAGWGLHLRIDRQRLHCLNERRDGSGALVFRAWEERGDRDKFVESDEDAELLFNVPFTGSVKLKGVIVMGEDDGSHPAEMRLFKNIPHMSFDDAGREPDQMFSLNRDPTGELEYPTKVARFSSVSHLSIHFPKNFGAETTKIFYIGLKGEWTEAARQEVTICSYEAAPNPADHRLQQVTPQAHLIS
SIO_010081: PITHD1
subclass of: SO_0000673
so part of: PITHD1
location: complement(join(553491..553592,553925..554033,554395..554499,555428..555505,555598..555641,555746..555937))
location: region:553491-555937:-1
so has part: feature:555746-555937:-1:exon
so has part: feature:555598-555641:-1:exon
so has part: feature:555428-555505:-1:exon
so has part: feature:554395-554499:-1:exon
so has part: feature:553925-554033:-1:exon
so has part: feature:553491-553592:-1:exon

XP_038023249.1
type: Protein
SIO_000068: ncbiprotein

position:553491:-1
position: 553491
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:555937:-1
position: 555937
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:555746-555937:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:555598-555641:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:555428-555505:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:554395-554499:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:553925-554033:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:553491-553592:-1:exon

LOC119713624
type: Gene
subclass of: SO_0000704
RO_0002162: 8839
gene: LOC119713624
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 553936..555190
location: region:553936-555190:1
so has part: feature:553936-555190:1:exon
subclass of: SO_0000011

119713624
type: Gene
SIO_000068: ncbigene

position:553936:1
position: 553936
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:555190:1
position: 555190
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:553936-555190:1:exon

LOC119713624
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 8839
nc RNA class: lncRNA
gene: LOC119713624
product: uncharacterized LOC119713624
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 108 samples with support for all annotated introns
transcript id: XR_005260836.1
SIO_010081: LOC119713624
subclass of: SO_0000673
so part of: LOC119713624
location: join(553936..554070,554574..555190)
location: region:553936-555190:1
so has part: feature:553936-554070:1:exon
so has part: feature:554574-555190:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:553936-554070:1:exon

position:554070:1
position: 554070
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:554574-555190:1:exon

position:554574:1
position: 554574
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

ELOA
type: Gene
subclass of: SO_0000704
RO_0002162: 8839
gene: ELOA
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(556200..565313)
location: region:556200-565313:-1
so has part: feature:556200-565313:-1:exon
subclass of: SO_0000010

119713645
type: Gene
SIO_000068: ncbigene

position:556200:-1
position: 556200
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:565313:-1
position: 565313
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:556200-565313:-1:exon

ELOA
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8839
gene: ELOA
product: elongin A
exception: unclassified transcription discrepancy
note: The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: inserted 1 base in 1 codon; deleted 3 bases in 3 codons; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 96% coverage of the annotated genomic feature by RNAseq alignments, including 126 samples with support for all annotated introns
transcript id: XM_038167364.1
SIO_010081: ELOA
subclass of: SO_0000673
so part of: ELOA
location: complement(join(556200..557228,557825..557976,558262..558374,558820..559001,559270..559367,559604..559759,560121..560235,561126..562341,563145..563263,563817..563873,565126..565313))
location: region:556200-565313:-1
so has part: feature:565126-565313:-1:exon
so has part: feature:563817-563873:-1:exon
so has part: feature:563145-563263:-1:exon
so has part: feature:561126-562341:-1:exon
so has part: feature:560121-560235:-1:exon
so has part: feature:559604-559759:-1:exon
so has part: feature:559270-559367:-1:exon
so has part: feature:558820-559001:-1:exon
so has part: feature:558262-558374:-1:exon
so has part: feature:557825-557976:-1:exon
so has part: feature:556200-557228:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:565126-565313:-1:exon

position:565126:-1
position: 565126
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:563817-563873:-1:exon

position:563817:-1
position: 563817
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:563873:-1
position: 563873
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:563145-563263:-1:exon

position:563145:-1
position: 563145
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:563263:-1
position: 563263
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:561126-562341:-1:exon

position:561126:-1
position: 561126
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:562341:-1
position: 562341
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:560121-560235:-1:exon

position:560121:-1
position: 560121
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:560235:-1
position: 560235
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:559604-559759:-1:exon

position:559604:-1
position: 559604
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:559759:-1
position: 559759
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:559270-559367:-1:exon

position:559270:-1
position: 559270
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:559367:-1
position: 559367
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:558820-559001:-1:exon

position:558820:-1
position: 558820
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:559001:-1
position: 559001
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:558262-558374:-1:exon

position:558262:-1
position: 558262
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:558374:-1
position: 558374
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:557825-557976:-1:exon

position:557825:-1
position: 557825
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:557976:-1
position: 557976
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:556200-557228:-1:exon

position:557228:-1
position: 557228
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

ELOA
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8839
gene: ELOA
exception: unclassified translation discrepancy
note: The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: inserted 1 base in 1 codon; deleted 3 bases in 3 codons; Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: LOW QUALITY PROTEIN: elongin-A
translation: MAESVLEVVGRLQSRLAGSSEPKKLLKSLKRLSELPITVDILVETGVGKTVNGLRKHELVGDFAKNLVARWKKLVPVPQEADRNNLDSEDRDYERNSSRKKREPSPREDEEHDQDYSEPFQPSCSQSYSPDHREKKSKRYSGPERAHETYDYSSQEDKGWSRSSPVLSSDQEYSDYGHAVSPAPSESPQDMDTDPYGSEEQEEPAGFHQKAGKGHGFQEKLGGGRERNPGEFHDKGSVSRNKEHKASHKEKQRLDGRLEDRTSAFSPERSHKAAFKEQLRESPVAGCSKEKQRTSDGTRKEKGRESSSSRKEKLHVQPHLEESPDNHVKKRKHQDPEKSKVEKSKPGLETSSREREKRKAESDSSNRVKEKGGSGSLKTSEGKHKASEADKKSVGFSSSFGEGEAEDEFEQPTMSFESYLSYDQPXKKKKKVAKPSVPAGEKDQGHSKQNGSKASTKSSSSSRKSPSHKRTSEKKAEKKQPEAPKPNRILIDVVPTLPDIPLPPIQANYRPLPSIESITCSQTKRKAVSSPVEESEAGFTGRRLNSKMQVYSGSKTAYLPKMMTLHEQCIRVLSNNIDSIYEVGGVPFSVLEPVLERCTPEQLYRIEECNHVLIEDTDQLWHNHCLRDFKNEKPEEFETWREMYLRLHDAREQRLLMLARNIGSAHANKPKGRVAKMAFVNSAVKPPRDVRRRQEKFGTGGALVPEKTKIKPVFYTSGKSHARVSEEQSYDGPSTSSAHSVPSSGSTFSSYDPRKPPVKKIAPMMAKTIKAFKNRFSRR
SIO_010081: ELOA
subclass of: SO_0000673
so part of: ELOA
location: complement(join(557167..557228,557825..557976,558262..558374,558820..559001,559270..559367,559604..559759,560121..560235,561126..562341,563145..563263,563817..563873,565126..565197))
location: region:557167-565197:-1
so has part: feature:565126-565197:-1:exon
so has part: feature:563817-563873:-1:exon
so has part: feature:563145-563263:-1:exon
so has part: feature:561126-562341:-1:exon
so has part: feature:560121-560235:-1:exon
so has part: feature:559604-559759:-1:exon
so has part: feature:559270-559367:-1:exon
so has part: feature:558820-559001:-1:exon
so has part: feature:558262-558374:-1:exon
so has part: feature:557825-557976:-1:exon
so has part: feature:557167-557228:-1:exon

XP_038023292.1
type: Protein
SIO_000068: ncbiprotein

position:557167:-1
position: 557167
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:565197:-1
position: 565197
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:565126-565197:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:563817-563873:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:563145-563263:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:561126-562341:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:560121-560235:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:559604-559759:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:559270-559367:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:558820-559001:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:558262-558374:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:557825-557976:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:557167-557228:-1:exon

RPL11
type: Gene
subclass of: SO_0000704
RO_0002162: 8839
gene: RPL11
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(566017..568647)
location: region:566017-568647:-1
so has part: feature:566017-568647:-1:exon
subclass of: SO_0000010

119713629
type: Gene
SIO_000068: ncbigene

position:566017:-1
position: 566017
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:568647:-1
position: 568647
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:566017-568647:-1:exon

RPL11
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8839
gene: RPL11
product: ribosomal protein L11
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 21 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 126 samples with support for all annotated introns
transcript id: XM_038167326.1
SIO_010081: RPL11
subclass of: SO_0000673
so part of: RPL11
location: complement(join(566017..566092,566709..566819,567209..567340,567734..567840,568118..568268,568530..568647))
location: region:566017-568647:-1
so has part: feature:568530-568647:-1:exon
so has part: feature:568118-568268:-1:exon
so has part: feature:567734-567840:-1:exon
so has part: feature:567209-567340:-1:exon
so has part: feature:566709-566819:-1:exon
so has part: feature:566017-566092:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:568530-568647:-1:exon

position:568530:-1
position: 568530
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:568118-568268:-1:exon

position:568118:-1
position: 568118
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:568268:-1
position: 568268
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:567734-567840:-1:exon

position:567734:-1
position: 567734
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:567840:-1
position: 567840
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:567209-567340:-1:exon

position:567209:-1
position: 567209
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:567340:-1
position: 567340
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:566709-566819:-1:exon

position:566709:-1
position: 566709
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:566819:-1
position: 566819
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:566017-566092:-1:exon

position:566092:-1
position: 566092
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

RPL11
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8839
gene: RPL11
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: 60S ribosomal protein L11
translation: MAQDQGEKENPMRELRIRKLCLNICVGESGDRLTRAAKVLEQLTGQTPVFSKARYTVRSFGIRRNEKIAVHCTVRGAKAEEILEKGLKVREYELRKNNFSDTGNFGFGIQEHIDLGIKYDPSIGIYGLDFYVVLGRPGFSIADKKRRTGNIGAKHRIGKEEAMRWFQQKYDGIILPGK
SIO_010081: RPL11
subclass of: SO_0000673
so part of: RPL11
location: complement(join(566063..566092,566709..566819,567209..567340,567734..567840,568118..568268,568530..568535))
location: region:566063-568535:-1
so has part: feature:568530-568535:-1:exon
so has part: feature:568118-568268:-1:exon
so has part: feature:567734-567840:-1:exon
so has part: feature:567209-567340:-1:exon
so has part: feature:566709-566819:-1:exon
so has part: feature:566063-566092:-1:exon

XP_038023254.1
type: Protein
SIO_000068: ncbiprotein

position:566063:-1
position: 566063
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:568535:-1
position: 568535
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:568530-568535:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:568118-568268:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:567734-567840:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:567209-567340:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:566709-566819:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:566063-566092:-1:exon

LOC119713626
type: Gene
subclass of: SO_0000704
RO_0002162: 8839
gene: LOC119713626
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(568939..572697)
location: region:568939-572697:-1
so has part: feature:568939-572697:-1:exon
subclass of: SO_0000010

119713626
type: Gene
SIO_000068: ncbigene

position:568939:-1
position: 568939
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:572697:-1
position: 572697
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:568939-572697:-1:exon

LOC119713626
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8839
gene: LOC119713626
product: sodium-dependent phosphate transport protein 3-like, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 25 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 88 samples with support for all annotated introns
transcript id: XM_038167323.1
SIO_010081: LOC119713626
subclass of: SO_0000673
so part of: LOC119713626
location: complement(join(568939..569190,569678..569768,570110..570257,570339..570471,570646..570807,570995..571113,571473..571559,571672..571759,571837..572070,572278..572432,572535..572697))
location: region:568939-572697:-1
so has part: feature:572535-572697:-1:exon
so has part: feature:572278-572432:-1:exon
so has part: feature:571837-572070:-1:exon
so has part: feature:571672-571759:-1:exon
so has part: feature:571473-571559:-1:exon
so has part: feature:570995-571113:-1:exon
so has part: feature:570646-570807:-1:exon
so has part: feature:570339-570471:-1:exon
so has part: feature:570110-570257:-1:exon
so has part: feature:569678-569768:-1:exon
so has part: feature:568939-569190:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:572535-572697:-1:exon

position:572535:-1
position: 572535
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:572278-572432:-1:exon

position:572278:-1
position: 572278
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:572432:-1
position: 572432
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:571837-572070:-1:exon

position:571837:-1
position: 571837
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:572070:-1
position: 572070
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:571672-571759:-1:exon

position:571672:-1
position: 571672
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:571759:-1
position: 571759
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:571473-571559:-1:exon

position:571473:-1
position: 571473
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:571559:-1
position: 571559
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:570995-571113:-1:exon

position:570995:-1
position: 570995
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:571113:-1
position: 571113
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:570646-570807:-1:exon

position:570646:-1
position: 570646
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:570807:-1
position: 570807
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:570339-570471:-1:exon

position:570339:-1
position: 570339
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:570471:-1
position: 570471
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:570110-570257:-1:exon

position:570110:-1
position: 570110
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:570257:-1
position: 570257
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:569678-569768:-1:exon

position:569678:-1
position: 569678
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:569768:-1
position: 569768
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:568939-569190:-1:exon

position:569190:-1
position: 569190
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC119713626
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8839
gene: LOC119713626
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: sodium-dependent phosphate transport protein 3-like
translation: MERPGGSAEAPDEAAPLLPRPPPPPSSGLCSARCSLALLAHGSLLVAYALRAALSIAIIAITGGPPSANRSAPGPRLPQAPAYNWSAETQGIVLSSFFYGYGLTQALGGYGAGLLGGKLVLGSGLLLSSALTLLVPRAAELGAGFLVGLQALLGLAQGVIFPAQYTLWAKWAPPLERSRLMNIADAGCTFGTFSALLVAGFICQSLGWPLVFYIFGGVGCAWCLCWFLLVYEDPASHPWISAGEREYIVASLAHQGSSHGLSLPLGAMAKSLPLWAIAIACFCTDWLFYMLLTSMPTFMSSVLHFDLSENGLLSSLPYIGNGLGHILAGLLADFLLARRVLGTAAVRKLFSALGMLLPSIFLVAVPYIGCSSTAAVVLLTLALTIISMTGAGININHIDIAPRYAGFLLGVTNTLGIISGIIAPTAVGLLVSQDPRAGWRNAFIVAAALNVFGLVFYAAFGSGSLQPWAGGEPPEPAGPPAGGLPGGPERGVGGGGGTGRGC
SIO_010081: LOC119713626
subclass of: SO_0000673
so part of: LOC119713626
location: complement(join(568981..569190,569678..569768,570110..570257,570339..570471,570646..570807,570995..571113,571473..571559,571672..571759,571837..572070,572278..572432,572535..572616))
location: region:568981-572616:-1
so has part: feature:572535-572616:-1:exon
so has part: feature:572278-572432:-1:exon
so has part: feature:571837-572070:-1:exon
so has part: feature:571672-571759:-1:exon
so has part: feature:571473-571559:-1:exon
so has part: feature:570995-571113:-1:exon
so has part: feature:570646-570807:-1:exon
so has part: feature:570339-570471:-1:exon
so has part: feature:570110-570257:-1:exon
so has part: feature:569678-569768:-1:exon
so has part: feature:568981-569190:-1:exon

XP_038023251.1
type: Protein
SIO_000068: ncbiprotein

position:568981:-1
position: 568981
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:572616:-1
position: 572616
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:572535-572616:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:572278-572432:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:571837-572070:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:571672-571759:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:571473-571559:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:570995-571113:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:570646-570807:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:570339-570471:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:570110-570257:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:569678-569768:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:568981-569190:-1:exon

LOC119713626
type: Miscellaneous RNA
subclass of: SO_0000673
RO_0002162: 8839
gene: LOC119713626
product: sodium-dependent phosphate transport protein 3-like, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 11 samples with support for all annotated introns
transcript id: XR_005260841.1
SIO_010081: LOC119713626
so part of: LOC119713626
location: complement(join(569132..569190,569678..569956,570110..570257,570339..570471,570646..570719,570995..571235,571473..571559,571672..571759,571837..572070,572278..572432,572535..572697))
location: region:569132-572697:-1
so has part: feature:572535-572697:-1:exon
so has part: feature:572278-572432:-1:exon
so has part: feature:571837-572070:-1:exon
so has part: feature:571672-571759:-1:exon
so has part: feature:571473-571559:-1:exon
so has part: feature:570995-571235:-1:exon
so has part: feature:570646-570719:-1:exon
so has part: feature:570339-570471:-1:exon
so has part: feature:570110-570257:-1:exon
so has part: feature:569678-569956:-1:exon
so has part: feature:569132-569190:-1:exon

position:569132:-1
position: 569132
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:572535-572697:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:572278-572432:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:571837-572070:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:571672-571759:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:571473-571559:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:570995-571235:-1:exon

position:571235:-1
position: 571235
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:570646-570719:-1:exon

position:570719:-1
position: 570719
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:570339-570471:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:570110-570257:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:569678-569956:-1:exon

position:569956:-1
position: 569956
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:569132-569190:-1:exon

LOC119713626
type: Miscellaneous RNA
subclass of: SO_0000673
RO_0002162: 8839
gene: LOC119713626
product: sodium-dependent phosphate transport protein 3-like, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 9 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 54 samples with support for all annotated introns
transcript id: XR_005260839.1
SIO_010081: LOC119713626
so part of: LOC119713626
location: complement(join(569132..569190,569678..569956,570110..570257,570339..570471,570646..570807,570995..571113,571473..571559,571672..571759,571837..572070,572278..572432,572535..572696))
location: region:569132-572696:-1
so has part: feature:572535-572696:-1:exon
so has part: feature:572278-572432:-1:exon
so has part: feature:571837-572070:-1:exon
so has part: feature:571672-571759:-1:exon
so has part: feature:571473-571559:-1:exon
so has part: feature:570995-571113:-1:exon
so has part: feature:570646-570807:-1:exon
so has part: feature:570339-570471:-1:exon
so has part: feature:570110-570257:-1:exon
so has part: feature:569678-569956:-1:exon
so has part: feature:569132-569190:-1:exon

position:572696:-1
position: 572696
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:572535-572696:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:572278-572432:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:571837-572070:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:571672-571759:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:571473-571559:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:570995-571113:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:570646-570807:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:570339-570471:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:570110-570257:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:569678-569956:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:569132-569190:-1:exon

LOC119713626
type: Miscellaneous RNA
subclass of: SO_0000673
RO_0002162: 8839
gene: LOC119713626
product: sodium-dependent phosphate transport protein 3-like, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 13 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 14 samples with support for all annotated introns
transcript id: XR_005260840.1
SIO_010081: LOC119713626
so part of: LOC119713626
location: complement(join(569142..569190,569678..569768,570110..570257,570339..570471,570646..570719,570995..571235,571473..571559,571672..571759,571837..572070,572278..572432,572535..572697))
location: region:569142-572697:-1
so has part: feature:572535-572697:-1:exon
so has part: feature:572278-572432:-1:exon
so has part: feature:571837-572070:-1:exon
so has part: feature:571672-571759:-1:exon
so has part: feature:571473-571559:-1:exon
so has part: feature:570995-571235:-1:exon
so has part: feature:570646-570719:-1:exon
so has part: feature:570339-570471:-1:exon
so has part: feature:570110-570257:-1:exon
so has part: feature:569678-569768:-1:exon
so has part: feature:569142-569190:-1:exon

position:569142:-1
position: 569142
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:572535-572697:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:572278-572432:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:571837-572070:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:571672-571759:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:571473-571559:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:570995-571235:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:570646-570719:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:570339-570471:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:570110-570257:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:569678-569768:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:569142-569190:-1:exon

PPT1
type: Gene
subclass of: SO_0000704
RO_0002162: 8839
gene: PPT1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 572921..577241
location: region:572921-577241:1
so has part: feature:572921-577241:1:exon
subclass of: SO_0000010

119713628
type: Gene
SIO_000068: ncbigene

position:572921:1
position: 572921
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:577241:1
position: 577241
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:572921-577241:1:exon

PPT1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8839
gene: PPT1
product: palmitoyl-protein thioesterase 1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments, including 126 samples with support for all annotated introns
transcript id: XM_038167325.1
SIO_010081: PPT1
subclass of: SO_0000673
so part of: PPT1
location: join(572921..573020,573099..573208,573846..573973,574245..574315,575079..575181,575257..575347,575812..575910,576088..576159,576602..577241)
location: region:572921-577241:1
so has part: feature:572921-573020:1:exon
so has part: feature:573099-573208:1:exon
so has part: feature:573846-573973:1:exon
so has part: feature:574245-574315:1:exon
so has part: feature:575079-575181:1:exon
so has part: feature:575257-575347:1:exon
so has part: feature:575812-575910:1:exon
so has part: feature:576088-576159:1:exon
so has part: feature:576602-577241:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:572921-573020:1:exon

position:573020:1
position: 573020
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:573099-573208:1:exon

position:573099:1
position: 573099
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:573208:1
position: 573208
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:573846-573973:1:exon

position:573846:1
position: 573846
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:573973:1
position: 573973
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:574245-574315:1:exon

position:574245:1
position: 574245
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:574315:1
position: 574315
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:575079-575181:1:exon

position:575079:1
position: 575079
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:575181:1
position: 575181
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:575257-575347:1:exon

position:575257:1
position: 575257
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:575347:1
position: 575347
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:575812-575910:1:exon

position:575812:1
position: 575812
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:575910:1
position: 575910
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:576088-576159:1:exon

position:576088:1
position: 576088
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:576159:1
position: 576159
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:576602-577241:1:exon

position:576602:1
position: 576602
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

PPT1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8839
gene: PPT1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: palmitoyl-protein thioesterase 1
translation: MAALGAAVPLLLGLGLGLGLGHAAPPVVLWHGMGDSCCNPRSMGYIRGLLQRRLPGTYVLSLRIGASVLQDVENSFFMNANDQVREVCGQLAADPHLKGGYNAIGFSQGGQFLRAVAQRCPSPPMLNLISVGGQHQGVFGFPRCPGESSHICDWIRKTLDLGAYTPAVQEHLVQAEYWHDPLREEDYRKSSIFLADINQERGINETYKKNLMALKRFVMVKFLNDTMVDPPISEWFGFYKSGQAKETIPLRETPLYTEDRLGLQEMDKAGKLLFLGVEGEHLQFSEQWFCATILPFLQ
SIO_010081: PPT1
subclass of: SO_0000673
so part of: PPT1
location: join(572921..573020,573099..573208,573846..573973,574245..574315,575079..575181,575257..575347,575812..575910,576088..576159,576602..576724)
location: region:572921-576724:1
so has part: feature:572921-573020:1:exon
so has part: feature:573099-573208:1:exon
so has part: feature:573846-573973:1:exon
so has part: feature:574245-574315:1:exon
so has part: feature:575079-575181:1:exon
so has part: feature:575257-575347:1:exon
so has part: feature:575812-575910:1:exon
so has part: feature:576088-576159:1:exon
so has part: feature:576602-576724:1:exon

XP_038023253.1
type: Protein
SIO_000068: ncbiprotein

position:576724:1
position: 576724
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:572921-573020:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:573099-573208:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:573846-573973:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:574245-574315:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:575079-575181:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:575257-575347:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:575812-575910:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:576088-576159:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:576602-576724:1:exon

CAP1
type: Gene
subclass of: SO_0000704
RO_0002162: 8839
gene: CAP1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(577400..585295)
location: region:577400-585295:-1
so has part: feature:577400-585295:-1:exon
subclass of: SO_0000010

119713627
type: Gene
SIO_000068: ncbigene

position:577400:-1
position: 577400
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:585295:-1
position: 585295
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:577400-585295:-1:exon

CAP1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8839
gene: CAP1
product: cyclase associated actin cytoskeleton regulatory protein 1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 12 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 60 samples with support for all annotated introns
transcript id: XM_038167324.1
SIO_010081: CAP1
subclass of: SO_0000673
so part of: CAP1
location: complement(join(577400..578810,579177..579320,579871..579953,580056..580179,580385..580572,581240..581417,581524..581629,582163..582248,582356..582499,583993..584070,584639..584739,584920..585031,585272..585295))
location: region:577400-585295:-1
so has part: feature:585272-585295:-1:exon
so has part: feature:584920-585031:-1:exon
so has part: feature:584639-584739:-1:exon
so has part: feature:583993-584070:-1:exon
so has part: feature:582356-582499:-1:exon
so has part: feature:582163-582248:-1:exon
so has part: feature:581524-581629:-1:exon
so has part: feature:581240-581417:-1:exon
so has part: feature:580385-580572:-1:exon
so has part: feature:580056-580179:-1:exon
so has part: feature:579871-579953:-1:exon
so has part: feature:579177-579320:-1:exon
so has part: feature:577400-578810:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:585272-585295:-1:exon

position:585272:-1
position: 585272
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:584920-585031:-1:exon

position:584920:-1
position: 584920
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:585031:-1
position: 585031
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:584639-584739:-1:exon

position:584639:-1
position: 584639
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:584739:-1
position: 584739
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:583993-584070:-1:exon

position:583993:-1
position: 583993
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:584070:-1
position: 584070
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:582356-582499:-1:exon

position:582356:-1
position: 582356
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:582499:-1
position: 582499
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:582163-582248:-1:exon

position:582163:-1
position: 582163
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:582248:-1
position: 582248
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:581524-581629:-1:exon

position:581524:-1
position: 581524
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:581629:-1
position: 581629
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:581240-581417:-1:exon

position:581240:-1
position: 581240
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:581417:-1
position: 581417
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:580385-580572:-1:exon

position:580385:-1
position: 580385
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:580572:-1
position: 580572
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:580056-580179:-1:exon

position:580056:-1
position: 580056
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:580179:-1
position: 580179
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:579871-579953:-1:exon

position:579871:-1
position: 579871
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:579953:-1
position: 579953
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:579177-579320:-1:exon

position:579177:-1
position: 579177
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:579320:-1
position: 579320
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:577400-578810:-1:exon

position:578810:-1
position: 578810
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

CAP1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8839
gene: CAP1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: adenylyl cyclase-associated protein 1
translation: MERLVERLEKAVQRLETVCQGPGMCGDGSPQGMAQYVQAFDALLAGPVAEYMKISKEVGGDVQKHAEMVHAGLMSERSVLVTASQHQQPAENVFSTLLKPISEQIQAVQNFREKNRGSKLFNHLSAVSESIPALGWVAMAPKPGPYVKEMTDAAMFYTNRILKEYKDVDKKQVDWVKAYLSIWTELQAYIKEYHTTGLTWSKTGPVATEGAKAPSAPPAGAAPPPPGPPPPPAPAPTGSSSDDSASRSALFAQINRGEGITAGLRHVSDDMKTHKNPALKNQGGPIRSGPKPFTAPKPACSANPSQKASPKQPALLELEGKKWRVENHENATNLVISDTELKQVAYVFKCTNSTLQIKGKINSITLDNCKKLGLVFDDVVGIVEIINSRDVKVQVMGKVPTISINKTDGCHVYLSKNSLDCEIVSAKSSEMNVLIPTEGGDFTEFPVPEQFKTVWNGQKLVTTVTEIAG
SIO_010081: CAP1
subclass of: SO_0000673
so part of: CAP1
location: complement(join(578727..578810,579177..579320,579871..579953,580056..580179,580385..580572,581240..581417,581524..581629,582163..582248,582356..582499,583993..584070,584639..584739,584920..585013))
location: region:578727-585013:-1
so has part: feature:584920-585013:-1:exon
so has part: feature:584639-584739:-1:exon
so has part: feature:583993-584070:-1:exon
so has part: feature:582356-582499:-1:exon
so has part: feature:582163-582248:-1:exon
so has part: feature:581524-581629:-1:exon
so has part: feature:581240-581417:-1:exon
so has part: feature:580385-580572:-1:exon
so has part: feature:580056-580179:-1:exon
so has part: feature:579871-579953:-1:exon
so has part: feature:579177-579320:-1:exon
so has part: feature:578727-578810:-1:exon

XP_038023252.1
type: Protein
SIO_000068: ncbiprotein

position:578727:-1
position: 578727
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:585013:-1
position: 585013
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:584920-585013:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:584639-584739:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:583993-584070:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:582356-582499:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:582163-582248:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:581524-581629:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:581240-581417:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:580385-580572:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:580056-580179:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:579871-579953:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:579177-579320:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:578727-578810:-1:exon

MFSD2A
type: Gene
subclass of: SO_0000704
RO_0002162: 8839
gene: MFSD2A
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(588582..597061)
location: region:588582-597061:-1
so has part: feature:588582-597061:-1:exon
subclass of: SO_0000010

119713663
type: Gene
SIO_000068: ncbigene

position:588582:-1
position: 588582
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:597061:-1
position: 597061
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:588582-597061:-1:exon

MFSD2A
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8839
gene: MFSD2A
product: major facilitator superfamily domain containing 2A
exception: unclassified transcription discrepancy
note: The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: deleted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 15 Proteins, and 94% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_038167395.1
SIO_010081: MFSD2A
subclass of: SO_0000673
so part of: MFSD2A
location: complement(join(588582..589013,589265..589441,589629..589772,589938..590050,590303..590386,591104..591187,591335..591456,592020..592111,592194..592366,592820..592918,593013..593131,596122..596246,596638..596760,596907..597061))
location: region:588582-597061:-1
so has part: feature:596907-597061:-1:exon
so has part: feature:596638-596760:-1:exon
so has part: feature:596122-596246:-1:exon
so has part: feature:593013-593131:-1:exon
so has part: feature:592820-592918:-1:exon
so has part: feature:592194-592366:-1:exon
so has part: feature:592020-592111:-1:exon
so has part: feature:591335-591456:-1:exon
so has part: feature:591104-591187:-1:exon
so has part: feature:590303-590386:-1:exon
so has part: feature:589938-590050:-1:exon
so has part: feature:589629-589772:-1:exon
so has part: feature:589265-589441:-1:exon
so has part: feature:588582-589013:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:596907-597061:-1:exon

position:596907:-1
position: 596907
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:596638-596760:-1:exon

position:596638:-1
position: 596638
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:596760:-1
position: 596760
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:596122-596246:-1:exon

position:596122:-1
position: 596122
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:596246:-1
position: 596246
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:593013-593131:-1:exon

position:593013:-1
position: 593013
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:593131:-1
position: 593131
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:592820-592918:-1:exon

position:592820:-1
position: 592820
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:592918:-1
position: 592918
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:592194-592366:-1:exon

position:592194:-1
position: 592194
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:592366:-1
position: 592366
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:592020-592111:-1:exon

position:592020:-1
position: 592020
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:592111:-1
position: 592111
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:591335-591456:-1:exon

position:591335:-1
position: 591335
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:591456:-1
position: 591456
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:591104-591187:-1:exon

position:591104:-1
position: 591104
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:591187:-1
position: 591187
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:590303-590386:-1:exon

position:590303:-1
position: 590303
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:590386:-1
position: 590386
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:589938-590050:-1:exon

position:589938:-1
position: 589938
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:590050:-1
position: 590050
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:589629-589772:-1:exon

position:589629:-1
position: 589629
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:589772:-1
position: 589772
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:589265-589441:-1:exon

position:589265:-1
position: 589265
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:589441:-1
position: 589441
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:588582-589013:-1:exon

position:589013:-1
position: 589013
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

MFSD2A
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8839
gene: MFSD2A
exception: unclassified translation discrepancy
note: The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: deleted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: LOW QUALITY PROTEIN: sodium-dependent lysophosphatidylcholine symporter 1
translation: MAGGGGAERAGVAVAAAGLLAPARRQPRRRECRERLSVCSKLCYAVGGAPYQTTGCALGFFLQIYLLDVAQLDPFYASIILFVGRAWDAITDPLVGFFISKTPWTRFGRLMPWIIFSTPFAVISYFLIWFVPDISRGQVLWYLVFYCLFQTLAVPVPPQCFHVPYSALTMFISREQSERDSATAYRMTVEVLGTVVGTAIQGQIVGKVVTPCIQSPLFVSESNASASMGDVNMTHYSGSLTDMRNAYMVAAGVIGGLYILCAVILSVGVREKRESSELQSDEPVSFFRGLKLVMNHGAYIKLITGFLFTSLAFMLLEGNFALFCTYTLGFRNEFQNILLVIMLSATLTIPFWQWFLTRYGKKTAVYAGIAPAIPFLILVVTLPRNLVVTYIVAVAAGISVAATFLLPWSMLPDVVDDFKLQHPESRGHEAIFFSFYVFFTKFTSGVSLGISTLSLDFAGYQTRGCSQPNEVNITLKMLVSAAPVGLILLGLLLFSLYPINEEKRMENKKALQDLREESNSSSESDNTELPSVV
SIO_010081: MFSD2A
subclass of: SO_0000673
so part of: MFSD2A
location: complement(join(588956..589013,589265..589441,589629..589772,589938..590050,590303..590386,591104..591187,591335..591456,592020..592111,592194..592366,592820..592918,593013..593131,596122..596246,596638..596760,596907..596996))
location: region:588956-596996:-1
so has part: feature:596907-596996:-1:exon
so has part: feature:596638-596760:-1:exon
so has part: feature:596122-596246:-1:exon
so has part: feature:593013-593131:-1:exon
so has part: feature:592820-592918:-1:exon
so has part: feature:592194-592366:-1:exon
so has part: feature:592020-592111:-1:exon
so has part: feature:591335-591456:-1:exon
so has part: feature:591104-591187:-1:exon
so has part: feature:590303-590386:-1:exon
so has part: feature:589938-590050:-1:exon
so has part: feature:589629-589772:-1:exon
so has part: feature:589265-589441:-1:exon
so has part: feature:588956-589013:-1:exon

XP_038023323.1
type: Protein
SIO_000068: ncbiprotein

position:588956:-1
position: 588956
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:596996:-1
position: 596996
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:596907-596996:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:596638-596760:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:596122-596246:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:593013-593131:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:592820-592918:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:592194-592366:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:592020-592111:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:591335-591456:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:591104-591187:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:590303-590386:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:589938-590050:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:589629-589772:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:589265-589441:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:588956-589013:-1:exon

MYCL
type: Gene
subclass of: SO_0000704
RO_0002162: 8839
gene: MYCL
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 601832..605423
location: region:601832-605423:1
so has part: feature:601832-605423:1:exon
subclass of: SO_0000010

119713673
type: Gene
SIO_000068: ncbigene

position:601832:1
position: 601832
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:605423:1
position: 605423
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:601832-605423:1:exon

MYCL
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8839
gene: MYCL
product: MYCL proto-oncogene, bHLH transcription factor
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 7 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 117 samples with support for all annotated introns
transcript id: XM_038167423.1
SIO_010081: MYCL
subclass of: SO_0000673
so part of: MYCL
location: join(601832..602497,603851..605423)
location: region:601832-605423:1
so has part: feature:601832-602497:1:exon
so has part: feature:603851-605423:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:601832-602497:1:exon

position:602497:1
position: 602497
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:603851-605423:1:exon

position:603851:1
position: 603851
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

MYCL
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8839
gene: MYCL
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protein L-Myc
translation: MERDPSPHYFYDHDAGEDFHRSTAPSEDIWKKFELVPTPPRSPLGSPGDKGWGGGAEERAGGPARHGPAAEEPEYLLGPGPIFGNLSAFILRDCMWSGFSARERLEKAMTEKLAPGPPRAAPHKPSFGQDLGFSSSVSDCVDPAAVFLCPLADSKVPASSGSEGQSDSEGEEIDVVTVEKRQSLSLRQPVTITLRADPLDPCMKRFHISIHQQQHNYAARSPPDACPQPEPPQQDEEEPLSTTEPTPPGTLPEPGLPKAGTSPGSDSEDVAKRKNHNYLERKRRNDLRSRFLALRDQVPGLASCPKTPKVVILSKSSEYLQSLISAERRMAAEKQQLRLQQSQLLRRIAHLKGH
SIO_010081: MYCL
subclass of: SO_0000673
so part of: MYCL
location: join(601993..602497,603851..604410)
location: region:601993-604410:1
so has part: feature:601993-602497:1:exon
so has part: feature:603851-604410:1:exon

XP_038023351.1
type: Protein
SIO_000068: ncbiprotein

position:601993:1
position: 601993
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:604410:1
position: 604410
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:601993-602497:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:603851-604410:1:exon

TRIT1
type: Gene
subclass of: SO_0000704
RO_0002162: 8839
gene: TRIT1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 607396..619495
location: region:607396-619495:1
so has part: feature:607396-619495:1:exon
subclass of: SO_0000010

119713665
type: Gene
SIO_000068: ncbigene

position:607396:1
position: 607396
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:619495:1
position: 619495
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:607396-619495:1:exon

TRIT1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8839
gene: TRIT1
product: tRNA isopentenyltransferase 1
exception: unclassified transcription discrepancy
note: The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: deleted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 97% coverage of the annotated genomic feature by RNAseq alignments, including 126 samples with support for all annotated introns
transcript id: XM_038167399.1
SIO_010081: TRIT1
subclass of: SO_0000673
so part of: TRIT1
location: join(607396..607605,610935..611075,611510..611608,611807..611955,612757..612899,613161..613272,613553..613666,614540..614617,616016..616125,616453..616570,618900..619495)
location: region:607396-619495:1
so has part: feature:607396-607605:1:exon
so has part: feature:610935-611075:1:exon
so has part: feature:611510-611608:1:exon
so has part: feature:611807-611955:1:exon
so has part: feature:612757-612899:1:exon
so has part: feature:613161-613272:1:exon
so has part: feature:613553-613666:1:exon
so has part: feature:614540-614617:1:exon
so has part: feature:616016-616125:1:exon
so has part: feature:616453-616570:1:exon
so has part: feature:618900-619495:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:607396-607605:1:exon

position:607605:1
position: 607605
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:610935-611075:1:exon

position:610935:1
position: 610935
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:611075:1
position: 611075
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:611510-611608:1:exon

position:611510:1
position: 611510
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:611608:1
position: 611608
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:611807-611955:1:exon

position:611807:1
position: 611807
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:611955:1
position: 611955
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:612757-612899:1:exon

position:612757:1
position: 612757
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:612899:1
position: 612899
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:613161-613272:1:exon

position:613161:1
position: 613161
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:613272:1
position: 613272
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:613553-613666:1:exon

position:613553:1
position: 613553
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:613666:1
position: 613666
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:614540-614617:1:exon

position:614540:1
position: 614540
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:614617:1
position: 614617
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:616016-616125:1:exon

position:616016:1
position: 616016
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:616125:1
position: 616125
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:616453-616570:1:exon

position:616453:1
position: 616453
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:616570:1
position: 616570
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:618900-619495:1:exon

position:618900:1
position: 618900
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

TRIT1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8839
gene: TRIT1
exception: unclassified translation discrepancy
note: The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: deleted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: LOW QUALITY PROTEIN: tRNA dimethylallyltransferase
translation: MAARAMAAAAAVLCSGRAPPGPPRPLVVILGATGTGKSALAVQLGLRLGGEIVSADSMQVYKGLDIITNKVSPQEQQLCRHHMISFVDPLVSNYTVVDFRDRAVPLIEDIFARDKIPIVVGGTNYYIEALLWKVLVSTKDKASSAPSPAPDRKEELEQLDVVELHRRLSRVDPEMAARLHPHDKRKVARSLQVFEETGIPHSEILHRQQEEEGGGPLGGPLKYPNSCILWLHADQAALDRRLEQRVDDMLAAGLLEELRDFHRRYNQQKVAENRQDYQHGIFQSIGFKEFHEYLVSEGQCSPETSALLLQRGIQALKQVTKRYARRQNKWVRNRFLRRPGPNVPPVYGLEVSDHLRWEEDVLKPALEIVESFIQGRQPPAEPVRMEFDANEDKRRHRVCELCNRVIIGDREWAAHTRSKSHLHHLKKSRKLEAASRAAGGDAEGTETSGEERSVPVPRAWSRDGEEAPGPGWAQPERAETPRGDEAGV
SIO_010081: TRIT1
subclass of: SO_0000673
so part of: TRIT1
location: join(607429..607605,610935..611075,611510..611608,611807..611955,612757..612899,613161..613272,613553..613666,614540..614617,616016..616125,616453..616570,618900..619126)
location: region:607429-619126:1
so has part: feature:607429-607605:1:exon
so has part: feature:610935-611075:1:exon
so has part: feature:611510-611608:1:exon
so has part: feature:611807-611955:1:exon
so has part: feature:612757-612899:1:exon
so has part: feature:613161-613272:1:exon
so has part: feature:613553-613666:1:exon
so has part: feature:614540-614617:1:exon
so has part: feature:616016-616125:1:exon
so has part: feature:616453-616570:1:exon
so has part: feature:618900-619126:1:exon

XP_038023327.1
type: Protein
SIO_000068: ncbiprotein

position:607429:1
position: 607429
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:619126:1
position: 619126
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:607429-607605:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:610935-611075:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:611510-611608:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:611807-611955:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:612757-612899:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:613161-613272:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:613553-613666:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:614540-614617:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:616016-616125:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:616453-616570:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:618900-619126:1:exon

LOC119713674
type: Gene
subclass of: SO_0000704
RO_0002162: 8839
gene: LOC119713674
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(622025..629392)
location: region:622025-629392:-1
so has part: feature:622025-629392:-1:exon
subclass of: SO_0000010

119713674
type: Gene
SIO_000068: ncbigene

position:622025:-1
position: 622025
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:629392:-1
position: 629392
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:622025-629392:-1:exon

LOC119713674
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8839
gene: LOC119713674
product: CYFIP-related Rac1 interactor A-like
exception: unclassified transcription discrepancy
note: The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: deleted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 8 Proteins, and 97% coverage of the annotated genomic feature by RNAseq alignments, including 34 samples with support for all annotated introns
transcript id: XM_038167425.1
SIO_010081: LOC119713674
subclass of: SO_0000673
so part of: LOC119713674
location: complement(join(622025..622601,622695..622765,622954..623080,623172..623251,623423..623539,623651..623728,623923..624059,624226..624331,624398..624520,626103..626183,626630..626708,629240..629392))
location: region:622025-629392:-1
so has part: feature:629240-629392:-1:exon
so has part: feature:626630-626708:-1:exon
so has part: feature:626103-626183:-1:exon
so has part: feature:624398-624520:-1:exon
so has part: feature:624226-624331:-1:exon
so has part: feature:623923-624059:-1:exon
so has part: feature:623651-623728:-1:exon
so has part: feature:623423-623539:-1:exon
so has part: feature:623172-623251:-1:exon
so has part: feature:622954-623080:-1:exon
so has part: feature:622695-622765:-1:exon
so has part: feature:622025-622601:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:629240-629392:-1:exon

position:629240:-1
position: 629240
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:626630-626708:-1:exon

position:626630:-1
position: 626630
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:626708:-1
position: 626708
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:626103-626183:-1:exon

position:626103:-1
position: 626103
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:626183:-1
position: 626183
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:624398-624520:-1:exon

position:624398:-1
position: 624398
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:624520:-1
position: 624520
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:624226-624331:-1:exon

position:624226:-1
position: 624226
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:624331:-1
position: 624331
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:623923-624059:-1:exon

position:623923:-1
position: 623923
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:624059:-1
position: 624059
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:623651-623728:-1:exon

position:623651:-1
position: 623651
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:623728:-1
position: 623728
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:623423-623539:-1:exon

position:623423:-1
position: 623423
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:623539:-1
position: 623539
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:623172-623251:-1:exon

position:623172:-1
position: 623172
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:623251:-1
position: 623251
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:622954-623080:-1:exon

position:622954:-1
position: 622954
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:623080:-1
position: 623080
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:622695-622765:-1:exon

position:622695:-1
position: 622695
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:622765:-1
position: 622765
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:622025-622601:-1:exon

position:622601:-1
position: 622601
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC119713674
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8839
gene: LOC119713674
exception: unclassified translation discrepancy
note: The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: deleted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: LOW QUALITY PROTEIN: CYFIP-related Rac1 interactor A-like
translation: MGNLIKVLGKDLENCPHFFLDFENAQPTEAETAVWNQVNAVLEEAQGVLAELQSYQGAGQEIREAIQNPGDLRLQERAWSAVCPLVAKLKRFYEFSLRLENALRSLLEALTSPPYAPTQHLEREQALAKQFAEILHFTLSFDELKMTNPAIQNDFSYYRRTISRNRINNLQLDAESEVNNEMANRMSLFYAEATPMLKTLSNATTKFVSENKTLPIEDTTDCLSTMACVCRVMLETPEYRSRFTNTETLLFCMRVMVGVIILYDHVHPVGAFAKTSKIDMKGCIKVLKEQPSTSTEGLLNALRYTTRHLNDDTTSKQVRALLQ
SIO_010081: LOC119713674
subclass of: SO_0000673
so part of: LOC119713674
location: complement(join(622538..622601,622695..622765,622954..623080,623172..623251,623423..623539,623651..623728,623923..624059,624226..624331,624398..624520,626103..626172))
location: region:622538-626172:-1
so has part: feature:626103-626172:-1:exon
so has part: feature:624398-624520:-1:exon
so has part: feature:624226-624331:-1:exon
so has part: feature:623923-624059:-1:exon
so has part: feature:623651-623728:-1:exon
so has part: feature:623423-623539:-1:exon
so has part: feature:623172-623251:-1:exon
so has part: feature:622954-623080:-1:exon
so has part: feature:622695-622765:-1:exon
so has part: feature:622538-622601:-1:exon

XP_038023353.1
type: Protein
SIO_000068: ncbiprotein

position:622538:-1
position: 622538
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:626172:-1
position: 626172
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:626103-626172:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:624398-624520:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:624226-624331:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:623923-624059:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:623651-623728:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:623423-623539:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:623172-623251:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:622954-623080:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:622695-622765:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:622538-622601:-1:exon

HPCAL4
type: Gene
subclass of: SO_0000704
RO_0002162: 8839
gene: HPCAL4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 630560..634621
location: region:630560-634621:1
so has part: feature:630560-634621:1:exon
subclass of: SO_0000010

119713647
type: Gene
SIO_000068: ncbigene

position:630560:1
position: 630560
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:634621:1
position: 634621
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:630560-634621:1:exon

HPCAL4
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8839
gene: HPCAL4
product: hippocalcin like 4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 28 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 56 samples with support for all annotated introns
transcript id: XM_038167371.1
SIO_010081: HPCAL4
subclass of: SO_0000673
so part of: HPCAL4
location: join(630560..630676,632351..632520,632666..632881,633102..634621)
location: region:630560-634621:1
so has part: feature:630560-630676:1:exon
so has part: feature:632351-632520:1:exon
so has part: feature:632666-632881:1:exon
so has part: feature:633102-634621:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:630560-630676:1:exon

position:630676:1
position: 630676
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:632351-632520:1:exon

position:632351:1
position: 632351
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:632520:1
position: 632520
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:632666-632881:1:exon

position:632666:1
position: 632666
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:632881:1
position: 632881
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:633102-634621:1:exon

position:633102:1
position: 633102
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

HPCAL4
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8839
gene: HPCAL4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: hippocalcin-like protein 4
translation: MGKHSSKLAPEMLDDLVRSTEFSEQELKQWYKGFLKDCPTGILNLEEFQQLYIKFFPYGDASKFAQHAFRTFDKNGDGTIDFREFICALSVTSRGTFEQKLNWAFEMYDLDGDGMITRLEMLEIIEAIYKMVGTVIMMRMNQDGLTPQQRVDKIFTKMDKDKDDQISLEEFKEAAKSDPSIVLLLQCDMQK
SIO_010081: HPCAL4
subclass of: SO_0000673
so part of: HPCAL4
location: join(632359..632520,632666..632881,633102..633299)
location: region:632359-633299:1
so has part: feature:632359-632520:1:exon
so has part: feature:632666-632881:1:exon
so has part: feature:633102-633299:1:exon

XP_038023299.1
type: Protein
SIO_000068: ncbiprotein

position:632359:1
position: 632359
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:633299:1
position: 633299
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:632359-632520:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:632666-632881:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:633102-633299:1:exon

NT5C1A
type: Gene
subclass of: SO_0000704
RO_0002162: 8839
gene: NT5C1A
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 635184..646317
location: region:635184-646317:1
so has part: feature:635184-646317:1:exon
subclass of: SO_0000010

101803216
type: Gene
SIO_000068: ncbigene

position:635184:1
position: 635184
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:646317:1
position: 646317
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:635184-646317:1:exon

NT5C1A
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8839
gene: NT5C1A
product: 5'-nucleotidase, cytosolic IA
exception: unclassified transcription discrepancy
note: The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: deleted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 11 Proteins, and 97% coverage of the annotated genomic feature by RNAseq alignments, including 80 samples with support for all annotated introns
transcript id: XM_038167370.1
SIO_010081: NT5C1A
subclass of: SO_0000673
so part of: NT5C1A
location: join(635184..635442,641247..641414,642187..642316,642523..642645,643093..643278,643554..646317)
location: region:635184-646317:1
so has part: feature:635184-635442:1:exon
so has part: feature:641247-641414:1:exon
so has part: feature:642187-642316:1:exon
so has part: feature:642523-642645:1:exon
so has part: feature:643093-643278:1:exon
so has part: feature:643554-646317:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:635184-635442:1:exon

position:635442:1
position: 635442
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:641247-641414:1:exon

position:641247:1
position: 641247
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:641414:1
position: 641414
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:642187-642316:1:exon

position:642187:1
position: 642187
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:642316:1
position: 642316
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:642523-642645:1:exon

position:642523:1
position: 642523
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:642645:1
position: 642645
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:643093-643278:1:exon

position:643093:1
position: 643093
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:643278:1
position: 643278
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:643554-646317:1:exon

position:643554:1
position: 643554
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

NT5C1A
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8839
gene: NT5C1A
exception: unclassified translation discrepancy
note: The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: deleted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: LOW QUALITY PROTEIN: cytosolic 5'-nucleotidase 1A
translation: MEPPGTAGAPGAAGRPWEDAKAFYDNLAPKKKPKSPKPENAITIAVSSRALFRMEEEQKIYNEQGVEAYVKYQLDHENEPFLPGAAFPFVKALEAVNTQLRELYPDSEELFDIVLMTNNHAQVGVRLINSINHYDLFIERFCMTGGNSPICYLKAYHTNLYLSSDAEKVSGAIEEGIAAATIFSPSKDLEVSENQLRVAFDGDAVLFSDESEQIVKAHGLDMFFEHEKAHENKPLAQGPLKGFLEALGKLQKKFYSKGLRMECPIRTYLVTARSAASSGARALKTLRSWGLETDEALFLAGAPKGPLLKKIRPHIFFDDQMFHVEGAKEMGTVAAHVPYGVAQKHKRPAQEKQPQNSK
SIO_010081: NT5C1A
subclass of: SO_0000673
so part of: NT5C1A
location: join(635338..635442,641247..641414,642187..642316,642523..642645,643093..643278,643554..643919)
location: region:635338-643919:1
so has part: feature:635338-635442:1:exon
so has part: feature:641247-641414:1:exon
so has part: feature:642187-642316:1:exon
so has part: feature:642523-642645:1:exon
so has part: feature:643093-643278:1:exon
so has part: feature:643554-643919:1:exon

XP_038023298.1
type: Protein
SIO_000068: ncbiprotein

position:635338:1
position: 635338
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:643919:1
position: 643919
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:635338-635442:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:641247-641414:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:642187-642316:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:642523-642645:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:643093-643278:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:643554-643919:1:exon

HEYL
type: Gene
subclass of: SO_0000704
RO_0002162: 8839
gene: HEYL
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 657400..665657
location: region:657400-665657:1
so has part: feature:657400-665657:1:exon
subclass of: SO_0000010

101804919
type: Gene
SIO_000068: ncbigene

position:657400:1
position: 657400
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:665657:1
position: 665657
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:657400-665657:1:exon

HEYL
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8839
gene: HEYL
product: hes related family bHLH transcription factor with YRPW motif like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 121 samples with support for all annotated introns
transcript id: XM_027443806.2
SIO_010081: HEYL
subclass of: SO_0000673
so part of: HEYL
location: join(657400..657887,660697..660763,661158..661241,661634..661715,663195..665657)
location: region:657400-665657:1
so has part: feature:657400-657887:1:exon
so has part: feature:660697-660763:1:exon
so has part: feature:661158-661241:1:exon
so has part: feature:661634-661715:1:exon
so has part: feature:663195-665657:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:657400-657887:1:exon

position:657887:1
position: 657887
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:660697-660763:1:exon

position:660697:1
position: 660697
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:660763:1
position: 660763
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:661158-661241:1:exon

position:661158:1
position: 661158
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:661241:1
position: 661241
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:661634-661715:1:exon

position:661634:1
position: 661634
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:661715:1
position: 661715
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:663195-665657:1:exon

position:663195:1
position: 663195
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

HEYL
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8839
gene: HEYL
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: hairy/enhancer-of-split related with YRPW motif-like protein
translation: MKRLCEESSSDTESDGTIDVGKEEEYSHVSRSVSPTTTSQIQARKKRRGIIEKRRRDRINSSLSELRRLVPTAFEKQGSSKLEKAEILQMTVDHLKMLHATGGAGFLDARALAVDYRSIGFRECLTEVVRYLGILEGQNTADPIRLRLLSHLNNYVAEMEPSPVATSLLPIQTWPWSFLHGAAGPVQVPRREAAPAPLVVTASSLAYPSPAVRPAPLRRVPGDMLPSRRSLLAGRMASSSRRARGAGSSAAVAAVPRMPSPTGVLREGSSKGSQIATFLFSPASAGVPVPPAYTAPGALGATVQGPGIRVGASRICRSWATEIGAF
SIO_010081: HEYL
subclass of: SO_0000673
so part of: HEYL
location: join(657808..657887,660697..660763,661158..661241,661634..661715,663195..663862)
location: region:657808-663862:1
so has part: feature:657808-657887:1:exon
so has part: feature:660697-660763:1:exon
so has part: feature:661158-661241:1:exon
so has part: feature:661634-661715:1:exon
so has part: feature:663195-663862:1:exon

XP_027299607.1
type: Protein
SIO_000068: ncbiprotein

position:657808:1
position: 657808
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:663862:1
position: 663862
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:657808-657887:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:660697-660763:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:661158-661241:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:661634-661715:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:663195-663862:1:exon

PABPC4
type: Gene
subclass of: SO_0000704
RO_0002162: 8839
gene: PABPC4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 667918..681446
location: region:667918-681446:1
so has part: feature:667918-681446:1:exon
subclass of: SO_0000010

101802732
type: Gene
SIO_000068: ncbigene

position:667918:1
position: 667918
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:681446:1
position: 681446
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:667918-681446:1:exon

PABPC4
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8839
gene: PABPC4
product: poly(A) binding protein cytoplasmic 4, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 11 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 94 samples with support for all annotated introns
transcript id: XM_038167171.1
SIO_010081: PABPC4
subclass of: SO_0000673
so part of: PABPC4
location: join(667918..668046,668475..668720,674036..674229,674525..674640,675128..675267,675542..675636,676198..676335,676914..677009,677500..677772,678034..678121,678296..678415,678969..679096,679727..679820,679918..680048,680131..680190,681096..681446)
location: region:667918-681446:1
so has part: feature:667918-668046:1:exon
so has part: feature:668475-668720:1:exon
so has part: feature:674036-674229:1:exon
so has part: feature:674525-674640:1:exon
so has part: feature:675128-675267:1:exon
so has part: feature:675542-675636:1:exon
so has part: feature:676198-676335:1:exon
so has part: feature:676914-677009:1:exon
so has part: feature:677500-677772:1:exon
so has part: feature:678034-678121:1:exon
so has part: feature:678296-678415:1:exon
so has part: feature:678969-679096:1:exon
so has part: feature:679727-679820:1:exon
so has part: feature:679918-680048:1:exon
so has part: feature:680131-680190:1:exon
so has part: feature:681096-681446:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:667918-668046:1:exon

position:668046:1
position: 668046
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:668475-668720:1:exon

position:668475:1
position: 668475
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:668720:1
position: 668720
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:674036-674229:1:exon

position:674036:1
position: 674036
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:674229:1
position: 674229
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:674525-674640:1:exon

position:674525:1
position: 674525
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:674640:1
position: 674640
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:675128-675267:1:exon

position:675128:1
position: 675128
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:675267:1
position: 675267
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:675542-675636:1:exon

position:675542:1
position: 675542
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:675636:1
position: 675636
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:676198-676335:1:exon

position:676198:1
position: 676198
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:676335:1
position: 676335
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:676914-677009:1:exon

position:676914:1
position: 676914
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:677009:1
position: 677009
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:677500-677772:1:exon

position:677500:1
position: 677500
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:677772:1
position: 677772
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:678034-678121:1:exon

position:678034:1
position: 678034
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:678121:1
position: 678121
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:678296-678415:1:exon

position:678296:1
position: 678296
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:678415:1
position: 678415
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:678969-679096:1:exon

position:678969:1
position: 678969
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:679096:1
position: 679096
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:679727-679820:1:exon

position:679727:1
position: 679727
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:679820:1
position: 679820
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:679918-680048:1:exon

position:679918:1
position: 679918
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:680048:1
position: 680048
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:680131-680190:1:exon

position:680131:1
position: 680131
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:680190:1
position: 680190
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:681096-681446:1:exon

position:681096:1
position: 681096
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

PABPC4
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8839
gene: PABPC4
product: poly(A) binding protein cytoplasmic 4, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 17 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 125 samples with support for all annotated introns
transcript id: XM_027443805.2
SIO_010081: PABPC4
subclass of: SO_0000673
so part of: PABPC4
location: join(667919..668046,668475..668720,674036..674229,674525..674640,675128..675267,675542..675636,676198..676335,676914..677009,677500..677772,678034..678121,678296..678415,678969..679096,679727..679820,679918..680048,680131..680230,681096..681446)
location: region:667919-681446:1
so has part: feature:667919-668046:1:exon
so has part: feature:668475-668720:1:exon
so has part: feature:674036-674229:1:exon
so has part: feature:674525-674640:1:exon
so has part: feature:675128-675267:1:exon
so has part: feature:675542-675636:1:exon
so has part: feature:676198-676335:1:exon
so has part: feature:676914-677009:1:exon
so has part: feature:677500-677772:1:exon
so has part: feature:678034-678121:1:exon
so has part: feature:678296-678415:1:exon
so has part: feature:678969-679096:1:exon
so has part: feature:679727-679820:1:exon
so has part: feature:679918-680048:1:exon
so has part: feature:680131-680230:1:exon
so has part: feature:681096-681446:1:exon

position:667919:1
position: 667919
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:667919-668046:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:668475-668720:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:674036-674229:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:674525-674640:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:675128-675267:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:675542-675636:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:676198-676335:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:676914-677009:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:677500-677772:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:678034-678121:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:678296-678415:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:678969-679096:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:679727-679820:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:679918-680048:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:680131-680230:1:exon

position:680230:1
position: 680230
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:681096-681446:1:exon

PABPC4
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8839
gene: PABPC4
product: poly(A) binding protein cytoplasmic 4, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 11 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 52 samples with support for all annotated introns
transcript id: XM_038167172.1
SIO_010081: PABPC4
subclass of: SO_0000673
so part of: PABPC4
location: join(668163..668181,668475..668720,674036..674229,674525..674640,675128..675267,675542..675636,676198..676335,676914..677009,677500..677772,678034..678121,678296..678415,678969..679096,679727..679820,679918..680048,680131..680190,681096..681446)
location: region:668163-681446:1
so has part: feature:668163-668181:1:exon
so has part: feature:668475-668720:1:exon
so has part: feature:674036-674229:1:exon
so has part: feature:674525-674640:1:exon
so has part: feature:675128-675267:1:exon
so has part: feature:675542-675636:1:exon
so has part: feature:676198-676335:1:exon
so has part: feature:676914-677009:1:exon
so has part: feature:677500-677772:1:exon
so has part: feature:678034-678121:1:exon
so has part: feature:678296-678415:1:exon
so has part: feature:678969-679096:1:exon
so has part: feature:679727-679820:1:exon
so has part: feature:679918-680048:1:exon
so has part: feature:680131-680190:1:exon
so has part: feature:681096-681446:1:exon

position:668163:1
position: 668163
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:668163-668181:1:exon

position:668181:1
position: 668181
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:668475-668720:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:674036-674229:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:674525-674640:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:675128-675267:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:675542-675636:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:676198-676335:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:676914-677009:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:677500-677772:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:678034-678121:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:678296-678415:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:678969-679096:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:679727-679820:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:679918-680048:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:680131-680190:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:681096-681446:1:exon

PABPC4
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8839
gene: PABPC4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: polyadenylate-binding protein 4 isoform X1
translation: MNAAAAASSYPMASLYVGDLHPDVTEAMLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFQQPADAERALDTMNFDVIKGKPIRIMWSQRDPSLRKSGVGNVFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDENGSKGYAFVHFETQDAADRAIEKMNGMLLNDRKVFVGRFKSRKEREAELGAKAKEFTNVYIKNFGDDMDDERLKELFSKYGKTLSVKVMTDPTGKSKGFGFVSFEKHEDANKAVEEMNGKDINGKMVFVGRAQKKVERQAELKRKFEQLKQERISRYQGVNLYIKNLDDTIDDEKLRKEFSPFGSITSAKVMLEDGRSKGFGFVCFSSPEEATKAVTEMNGRIVGSKPLYVALAQRKEERKAHLTNQYMQRIAGMRALPANTIINQFQPAAGGYFMPAVPQAQSRPTYYAPNQMTQMRPNPRWQQGGRPQGFQGMPNAMRQSGPRPALRHLAPAGNAPASRGLPAAAQRVGVATAAQNLAPRPPVAAPTPRAVPPYKYASSVRSPHPAVQPLQAPQPAVHVQGQEPLTASMLAAAPPQEQKQMLGERLFPLIQAMHPSLAGKITGMLLEIDNSELLHMLESPESLRSKVEEAVAVLQAHQAKKEAAQKDARSQIAPS
SIO_010081: PABPC4
subclass of: SO_0000673
so part of: PABPC4
location: join(668522..668720,674036..674229,674525..674640,675128..675267,675542..675636,676198..676335,676914..677009,677500..677772,678034..678121,678296..678415,678969..679096,679727..679820,679918..680048,680131..680190,681096..681125)
location: region:668522-681125:1
so has part: feature:668522-668720:1:exon
so has part: feature:674036-674229:1:exon
so has part: feature:674525-674640:1:exon
so has part: feature:675128-675267:1:exon
so has part: feature:675542-675636:1:exon
so has part: feature:676198-676335:1:exon
so has part: feature:676914-677009:1:exon
so has part: feature:677500-677772:1:exon
so has part: feature:678034-678121:1:exon
so has part: feature:678296-678415:1:exon
so has part: feature:678969-679096:1:exon
so has part: feature:679727-679820:1:exon
so has part: feature:679918-680048:1:exon
so has part: feature:680131-680190:1:exon
so has part: feature:681096-681125:1:exon

XP_038023099.1
type: Protein
SIO_000068: ncbiprotein

position:668522:1
position: 668522
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:681125:1
position: 681125
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:668522-668720:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:674036-674229:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:674525-674640:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:675128-675267:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:675542-675636:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:676198-676335:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:676914-677009:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:677500-677772:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:678034-678121:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:678296-678415:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:678969-679096:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:679727-679820:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:679918-680048:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:680131-680190:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:681096-681125:1:exon

PABPC4
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8839
gene: PABPC4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: polyadenylate-binding protein 4 isoform X1
translation: MNAAAAASSYPMASLYVGDLHPDVTEAMLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFQQPADAERALDTMNFDVIKGKPIRIMWSQRDPSLRKSGVGNVFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDENGSKGYAFVHFETQDAADRAIEKMNGMLLNDRKVFVGRFKSRKEREAELGAKAKEFTNVYIKNFGDDMDDERLKELFSKYGKTLSVKVMTDPTGKSKGFGFVSFEKHEDANKAVEEMNGKDINGKMVFVGRAQKKVERQAELKRKFEQLKQERISRYQGVNLYIKNLDDTIDDEKLRKEFSPFGSITSAKVMLEDGRSKGFGFVCFSSPEEATKAVTEMNGRIVGSKPLYVALAQRKEERKAHLTNQYMQRIAGMRALPANTIINQFQPAAGGYFMPAVPQAQSRPTYYAPNQMTQMRPNPRWQQGGRPQGFQGMPNAMRQSGPRPALRHLAPAGNAPASRGLPAAAQRVGVATAAQNLAPRPPVAAPTPRAVPPYKYASSVRSPHPAVQPLQAPQPAVHVQGQEPLTASMLAAAPPQEQKQMLGERLFPLIQAMHPSLAGKITGMLLEIDNSELLHMLESPESLRSKVEEAVAVLQAHQAKKEAAQKDARSQIAPS
SIO_010081: PABPC4
subclass of: SO_0000673
so part of: PABPC4
location: join(668522..668720,674036..674229,674525..674640,675128..675267,675542..675636,676198..676335,676914..677009,677500..677772,678034..678121,678296..678415,678969..679096,679727..679820,679918..680048,680131..680190,681096..681125)
location: region:668522-681125:1
so has part: feature:668522-668720:1:exon
so has part: feature:674036-674229:1:exon
so has part: feature:674525-674640:1:exon
so has part: feature:675128-675267:1:exon
so has part: feature:675542-675636:1:exon
so has part: feature:676198-676335:1:exon
so has part: feature:676914-677009:1:exon
so has part: feature:677500-677772:1:exon
so has part: feature:678034-678121:1:exon
so has part: feature:678296-678415:1:exon
so has part: feature:678969-679096:1:exon
so has part: feature:679727-679820:1:exon
so has part: feature:679918-680048:1:exon
so has part: feature:680131-680190:1:exon
so has part: feature:681096-681125:1:exon

XP_038023100.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:668522-668720:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:674036-674229:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:674525-674640:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:675128-675267:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:675542-675636:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:676198-676335:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:676914-677009:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:677500-677772:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:678034-678121:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:678296-678415:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:678969-679096:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:679727-679820:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:679918-680048:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:680131-680190:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:681096-681125:1:exon

PABPC4
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8839
gene: PABPC4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: polyadenylate-binding protein 4 isoform X2
translation: MNAAAAASSYPMASLYVGDLHPDVTEAMLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFQQPADAERALDTMNFDVIKGKPIRIMWSQRDPSLRKSGVGNVFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDENGSKGYAFVHFETQDAADRAIEKMNGMLLNDRKVFVGRFKSRKEREAELGAKAKEFTNVYIKNFGDDMDDERLKELFSKYGKTLSVKVMTDPTGKSKGFGFVSFEKHEDANKAVEEMNGKDINGKMVFVGRAQKKVERQAELKRKFEQLKQERISRYQGVNLYIKNLDDTIDDEKLRKEFSPFGSITSAKVMLEDGRSKGFGFVCFSSPEEATKAVTEMNGRIVGSKPLYVALAQRKEERKAHLTNQYMQRIAGMRALPANTIINQFQPAAGGYFMPAVPQAQSRPTYYAPNQMTQMRPNPRWQQGGRPQGFQGMPNAMRQSGPRPALRHLAPAGNAPASRGLPAAAQRVGVATAAQNLAPRPPVAAPTPRAVPPYKYASSVRSPHPAVQPLQAPQPAVHVQGQEPLTASMLAAAPPQEQKQMLGERLFPLIQAMHPSLAGKITGMLLEIDNSELLHMLESPESLRSKVEEAVAVLQAHQAKKEAAQKVGVVAATS
SIO_010081: PABPC4
subclass of: SO_0000673
so part of: PABPC4
location: join(668522..668720,674036..674229,674525..674640,675128..675267,675542..675636,676198..676335,676914..677009,677500..677772,678034..678121,678296..678415,678969..679096,679727..679820,679918..680048,680131..680217)
location: region:668522-680217:1
so has part: feature:668522-668720:1:exon
so has part: feature:674036-674229:1:exon
so has part: feature:674525-674640:1:exon
so has part: feature:675128-675267:1:exon
so has part: feature:675542-675636:1:exon
so has part: feature:676198-676335:1:exon
so has part: feature:676914-677009:1:exon
so has part: feature:677500-677772:1:exon
so has part: feature:678034-678121:1:exon
so has part: feature:678296-678415:1:exon
so has part: feature:678969-679096:1:exon
so has part: feature:679727-679820:1:exon
so has part: feature:679918-680048:1:exon
so has part: feature:680131-680217:1:exon

XP_027299606.2
type: Protein
SIO_000068: ncbiprotein

position:680217:1
position: 680217
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:668522-668720:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:674036-674229:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:674525-674640:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:675128-675267:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:675542-675636:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:676198-676335:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:676914-677009:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:677500-677772:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:678034-678121:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:678296-678415:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:678969-679096:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:679727-679820:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:679918-680048:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:680131-680217:1:exon

LOC113839811
type: Gene
subclass of: SO_0000704
RO_0002162: 8839
gene: LOC113839811
note: Derived by automated computational analysis using gene prediction method: cmsearch.
so part of: sequence
location: 676630..676762
location: region:676630-676762:1
so has part: feature:676630-676762:1:exon
subclass of: SO_0000578

113839811
type: Gene
SIO_000068: ncbigene

position:676630:1
position: 676630
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:676762:1
position: 676762
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:676630-676762:1:exon

LOC113839811
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 8839
nc RNA class: snoRNA
gene: LOC113839811
product: small nucleolar RNA SNORA55
inference: COORDINATES: nucleotide motif:Rfam:12.0:RF00431
inference: COORDINATES: profile:INFERNAL:1.1.1
note: Derived by automated computational analysis using gene prediction method: cmsearch.
transcript id: XR_003492410.2
SIO_010081: LOC113839811
subclass of: SO_0000673
so part of: LOC113839811
location: 676630..676762
location: region:676630-676762:1
so has part: feature:676630-676762:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:676630-676762:1:exon

LOC113839812
type: Gene
subclass of: SO_0000704
RO_0002162: 8839
gene: LOC113839812
note: Derived by automated computational analysis using gene prediction method: cmsearch.
so part of: sequence
location: 677273..677401
location: region:677273-677401:1
so has part: feature:677273-677401:1:exon
subclass of: SO_0000578

113839812
type: Gene
SIO_000068: ncbigene

position:677273:1
position: 677273
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:677401:1
position: 677401
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:677273-677401:1:exon

LOC113839812
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 8839
nc RNA class: snoRNA
gene: LOC113839812
product: small nucleolar RNA SNORA55
inference: COORDINATES: nucleotide motif:Rfam:12.0:RF00431
inference: COORDINATES: profile:INFERNAL:1.1.1
note: Derived by automated computational analysis using gene prediction method: cmsearch.
transcript id: XR_003492411.2
SIO_010081: LOC113839812
subclass of: SO_0000673
so part of: LOC113839812
location: 677273..677401
location: region:677273-677401:1
so has part: feature:677273-677401:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:677273-677401:1:exon

LOC113839810
type: Gene
subclass of: SO_0000704
RO_0002162: 8839
gene: LOC113839810
note: Derived by automated computational analysis using gene prediction method: cmsearch.
so part of: sequence
location: 678543..678676
location: region:678543-678676:1
so has part: feature:678543-678676:1:exon
subclass of: SO_0000578

113839810
type: Gene
SIO_000068: ncbigene

position:678543:1
position: 678543
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:678676:1
position: 678676
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:678543-678676:1:exon

LOC113839810
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 8839
nc RNA class: snoRNA
gene: LOC113839810
product: small nucleolar RNA SNORA55
inference: COORDINATES: nucleotide motif:Rfam:12.0:RF00431
inference: COORDINATES: profile:INFERNAL:1.1.1
note: Derived by automated computational analysis using gene prediction method: cmsearch.
transcript id: XR_003492409.1
SIO_010081: LOC113839810
subclass of: SO_0000673
so part of: LOC113839810
location: 678543..678676
location: region:678543-678676:1
so has part: feature:678543-678676:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:678543-678676:1:exon

PPIE
type: Gene
subclass of: SO_0000704
RO_0002162: 8839
gene: PPIE
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 681847..685578
location: region:681847-685578:1
so has part: feature:681847-685578:1:exon
subclass of: SO_0000010

101802921
type: Gene
SIO_000068: ncbigene

position:681847:1
position: 681847
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:685578:1
position: 685578
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:681847-685578:1:exon

PPIE
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8839
gene: PPIE
product: peptidylprolyl isomerase E
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 35 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 126 samples with support for all annotated introns
transcript id: XM_027443941.2
SIO_010081: PPIE
subclass of: SO_0000673
so part of: PPIE
location: join(681847..681977,682080..682178,682252..682295,682795..682821,683166..683247,683799..683899,684242..684365,684439..684624,685041..685183,685271..685578)
location: region:681847-685578:1
so has part: feature:681847-681977:1:exon
so has part: feature:682080-682178:1:exon
so has part: feature:682252-682295:1:exon
so has part: feature:682795-682821:1:exon
so has part: feature:683166-683247:1:exon
so has part: feature:683799-683899:1:exon
so has part: feature:684242-684365:1:exon
so has part: feature:684439-684624:1:exon
so has part: feature:685041-685183:1:exon
so has part: feature:685271-685578:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:681847-681977:1:exon

position:681977:1
position: 681977
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:682080-682178:1:exon

position:682080:1
position: 682080
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:682178:1
position: 682178
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:682252-682295:1:exon

position:682252:1
position: 682252
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:682295:1
position: 682295
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:682795-682821:1:exon

position:682795:1
position: 682795
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:682821:1
position: 682821
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:683166-683247:1:exon

position:683166:1
position: 683166
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:683247:1
position: 683247
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:683799-683899:1:exon

position:683799:1
position: 683799
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:683899:1
position: 683899
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:684242-684365:1:exon

position:684242:1
position: 684242
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:684365:1
position: 684365
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:684439-684624:1:exon

position:684439:1
position: 684439
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:684624:1
position: 684624
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:685041-685183:1:exon

position:685041:1
position: 685041
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:685183:1
position: 685183
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:685271-685578:1:exon

position:685271:1
position: 685271
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

PPIE
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8839
gene: PPIE
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: peptidyl-prolyl cis-trans isomerase E
translation: MAAAAPRWGGAASGFRGGAGKMAATKRVLYVGGLAEEVDEKVLHAAFIPFGDITDIQIPLDYETEKHRGFAFVEFELAEDAAAAIDNMNESELFGRTIRVNLAKPMRIKEGSSRPVWSDDEWLKKFSGKTLEENAEEGGTEAPKQEAQEGEPPAKKARANPQVYMDIKIGNKPAGRIQILLRSDVVPMTVENFRCLCTHEKGFGFKGSSFHRIIPQFMCQAGDFTNHNGTGGKSIYGKKFDDENFILKHTGPGLLSMANSGPNTNGSQFFITCDKTDWLDGKHVVFGEVTEGMDVVRQIEAQGTKDGKPKQKVIISDCGECV
SIO_010081: PPIE
subclass of: SO_0000673
so part of: PPIE
location: join(681884..681977,682080..682178,682252..682295,682795..682821,683166..683247,683799..683899,684242..684365,684439..684624,685041..685183,685271..685339)
location: region:681884-685339:1
so has part: feature:681884-681977:1:exon
so has part: feature:682080-682178:1:exon
so has part: feature:682252-682295:1:exon
so has part: feature:682795-682821:1:exon
so has part: feature:683166-683247:1:exon
so has part: feature:683799-683899:1:exon
so has part: feature:684242-684365:1:exon
so has part: feature:684439-684624:1:exon
so has part: feature:685041-685183:1:exon
so has part: feature:685271-685339:1:exon

XP_027299742.2
type: Protein
SIO_000068: ncbiprotein

position:681884:1
position: 681884
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:685339:1
position: 685339
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:681884-681977:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:682080-682178:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:682252-682295:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:682795-682821:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:683166-683247:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:683799-683899:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:684242-684365:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:684439-684624:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:685041-685183:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:685271-685339:1:exon

BMP8A
type: Gene
subclass of: SO_0000704
RO_0002162: 8839
gene: BMP8A
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(686283..695626)
location: region:686283-695626:-1
so has part: feature:686283-695626:-1:exon
subclass of: SO_0000010

101804736
type: Gene
SIO_000068: ncbigene

position:686283:-1
position: 686283
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:695626:-1
position: 695626
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:686283-695626:-1:exon

BMP8A
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8839
gene: BMP8A
product: bone morphogenetic protein 8a, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 17 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 69 samples with support for all annotated introns
transcript id: XM_038167175.1
SIO_010081: BMP8A
subclass of: SO_0000673
so part of: BMP8A
location: complement(join(686283..687013,688331..688441,688706..688785,689352..689546,689723..689871,690322..690514,695171..695624))
location: region:686283-695624:-1
so has part: feature:695171-695624:-1:exon
so has part: feature:690322-690514:-1:exon
so has part: feature:689723-689871:-1:exon
so has part: feature:689352-689546:-1:exon
so has part: feature:688706-688785:-1:exon
so has part: feature:688331-688441:-1:exon
so has part: feature:686283-687013:-1:exon

position:695624:-1
position: 695624
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:695171-695624:-1:exon

position:695171:-1
position: 695171
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:690322-690514:-1:exon

position:690322:-1
position: 690322
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:690514:-1
position: 690514
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:689723-689871:-1:exon

position:689723:-1
position: 689723
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:689871:-1
position: 689871
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:689352-689546:-1:exon

position:689352:-1
position: 689352
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:689546:-1
position: 689546
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:688706-688785:-1:exon

position:688706:-1
position: 688706
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:688785:-1
position: 688785
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:688331-688441:-1:exon

position:688331:-1
position: 688331
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:688441:-1
position: 688441
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:686283-687013:-1:exon

position:687013:-1
position: 687013
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

BMP8A
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8839
gene: BMP8A
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: bone morphogenetic protein 8A isoform X1
translation: MGPGRGAAAGRGPLGALALLWAAAVLCQLGSGSVLRRRLHAAGFLQRRLSGGERRDVQREILAVLGLPGRPRPRAPAAARAPAAAAPLFMLDLYHAVAGEEEAEEEEAVSRPVLTGLSTQSPPPGSVVSRADTVVSLVNMVEQDRDTSSPKPYWKEFRFDLTQVPTGESVTAAEFRIYKARGATRHANSTLHISIYEIAAEHSNRESDLFLLDTQDLRAGTEGWLVFDVTAASNHWLVDRKYNLGLRLYVETDDGLSVDPGSAGLLGRRGPRSKQPFMVTFFRASSSPVRVTRAARAPRRRQPKKTNDLPHPNKLPGIFDDVHAADSRQVCRRHELYVSFQDLGWLDWVIAPQGYSAYYCEGECAFPLDSCMNATNHAILQSLVHLMKPEAVPKACCAPTKLSATSVLYYDSNNNVILKKHRNMVVKSCGCH
SIO_010081: BMP8A
subclass of: SO_0000673
so part of: BMP8A
location: complement(join(686864..687013,688331..688441,688706..688785,689352..689546,689723..689871,690322..690514,695171..695591))
location: region:686864-695591:-1
so has part: feature:695171-695591:-1:exon
so has part: feature:690322-690514:-1:exon
so has part: feature:689723-689871:-1:exon
so has part: feature:689352-689546:-1:exon
so has part: feature:688706-688785:-1:exon
so has part: feature:688331-688441:-1:exon
so has part: feature:686864-687013:-1:exon

XP_038023103.1
type: Protein
SIO_000068: ncbiprotein

position:686864:-1
position: 686864
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:695591:-1
position: 695591
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:695171-695591:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:690322-690514:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:689723-689871:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:689352-689546:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:688706-688785:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:688331-688441:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:686864-687013:-1:exon

BMP8A
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8839
gene: BMP8A
product: bone morphogenetic protein 8a, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 27 samples with support for all annotated introns
transcript id: XM_038167176.1
SIO_010081: BMP8A
subclass of: SO_0000673
so part of: BMP8A
location: complement(join(686932..687069,688331..688441,688706..688785,689352..689546,689723..689871,690322..690514,695171..695626))
location: region:686932-695626:-1
so has part: feature:695171-695626:-1:exon
so has part: feature:690322-690514:-1:exon
so has part: feature:689723-689871:-1:exon
so has part: feature:689352-689546:-1:exon
so has part: feature:688706-688785:-1:exon
so has part: feature:688331-688441:-1:exon
so has part: feature:686932-687069:-1:exon

position:686932:-1
position: 686932
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:695171-695626:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:690322-690514:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:689723-689871:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:689352-689546:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:688706-688785:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:688331-688441:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:686932-687069:-1:exon

position:687069:-1
position: 687069
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

BMP8A
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8839
gene: BMP8A
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: bone morphogenetic protein 8A isoform X2
translation: MGPGRGAAAGRGPLGALALLWAAAVLCQLGSGSVLRRRLHAAGFLQRRLSGGERRDVQREILAVLGLPGRPRPRAPAAARAPAAAAPLFMLDLYHAVAGEEEAEEEEAVSRPVLTGLSTQSPPPGSVVSRADTVVSLVNMVEQDRDTSSPKPYWKEFRFDLTQVPTGESVTAAEFRIYKARGATRHANSTLHISIYEIAAEHSNRESDLFLLDTQDLRAGTEGWLVFDVTAASNHWLVDRKYNLGLRLYVETDDGLSVDPGSAGLLGRRGPRSKQPFMVTFFRASSSPVRVTRAARAPRRRQPKKTNDLPHPNKLPGIFDDVHAADSRQVCRRHELYVSFQDLGWLDWVIAPQGYSAYYCEGECAFPLDSCMNATNHAILQSLVRAGAL
SIO_010081: BMP8A
subclass of: SO_0000673
so part of: BMP8A
location: complement(join(687049..687069,688331..688441,688706..688785,689352..689546,689723..689871,690322..690514,695171..695591))
location: region:687049-695591:-1
so has part: feature:695171-695591:-1:exon
so has part: feature:690322-690514:-1:exon
so has part: feature:689723-689871:-1:exon
so has part: feature:689352-689546:-1:exon
so has part: feature:688706-688785:-1:exon
so has part: feature:688331-688441:-1:exon
so has part: feature:687049-687069:-1:exon

XP_038023104.1
type: Protein
SIO_000068: ncbiprotein

position:687049:-1
position: 687049
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:695171-695591:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:690322-690514:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:689723-689871:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:689352-689546:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:688706-688785:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:688331-688441:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:687049-687069:-1:exon

MACF1
type: Gene
subclass of: SO_0000704
RO_0002162: 8839
gene: MACF1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(696374..831195)
location: region:696374-831195:-1
so has part: feature:696374-831195:-1:exon
subclass of: SO_0000010

101802536
type: Gene
SIO_000068: ncbigene

position:696374:-1
position: 696374
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:831195:-1
position: 831195
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:696374-831195:-1:exon

MACF1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8839
gene: MACF1
product: microtubule actin crosslinking factor 1
exception: unclassified transcription discrepancy
note: The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: deleted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 ESTs, 8 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments, including 7 samples with support for all annotated introns
transcript id: XM_038167173.1
SIO_010081: MACF1
subclass of: SO_0000673
so part of: MACF1
location: complement(join(696374..697929,698066..698189,699863..699973,700512..700723,701663..701780,703956..703973,704735..704809,705053..705207,705352..705514,706315..706326,706668..706831,707395..707512,707885..708073,708229..708372,708759..708887,709632..709826,710535..710694,710886..711055,711281..711400,711532..711738,711865..712020,712842..713015,713334..713462,713846..714043,714199..714354,714461..714634,714741..714842,715247..715348,715454..715576,716588..716814,717394..717625,718775..718783,719640..719843,720360..720578,720936..721043,722205..722324,723013..723219,723632..723873,724749..724833,725449..725775,726261..726420,727787..727953,728788..728958,729092..729253,746540..748011,748537..749032,749720..749919,750704..750833,751286..751527,752314..752376,754021..754138,754919..755075,756073..756239,757030..757347,757479..757687,757968..758091,758502..758678,759027..759548,759661..759888,760084..760317,760416..760565,772813..772948,773400..773488,773713..773868,774078..774176,774811..774918,775118..775201,775507..775669,775838..776031,776519..776657,776852..777030,777272..777441,778025..778208,778616..778742,779202..779356,779796..779948,781872..781997,782410..782505,783064..783168,783659..783820,783974..784051,784269..784397,784774..785051,785191..785345,786082..786175,786265..786392,786644..786739,786846..786965,787424..787530,787622..787734,788227..788393,794242..794334,795937..796014,798508..798597,799492..799553,830961..831195))
location: region:696374-831195:-1
so has part: feature:830961-831195:-1:exon
so has part: feature:799492-799553:-1:exon
so has part: feature:798508-798597:-1:exon
so has part: feature:795937-796014:-1:exon
so has part: feature:794242-794334:-1:exon
so has part: feature:788227-788393:-1:exon
so has part: feature:787622-787734:-1:exon
so has part: feature:787424-787530:-1:exon
so has part: feature:786846-786965:-1:exon
so has part: feature:786644-786739:-1:exon
so has part: feature:786265-786392:-1:exon
so has part: feature:786082-786175:-1:exon
so has part: feature:785191-785345:-1:exon
so has part: feature:784774-785051:-1:exon
so has part: feature:784269-784397:-1:exon
so has part: feature:783974-784051:-1:exon
so has part: feature:783659-783820:-1:exon
so has part: feature:783064-783168:-1:exon
so has part: feature:782410-782505:-1:exon
so has part: feature:781872-781997:-1:exon
so has part: feature:779796-779948:-1:exon
so has part: feature:779202-779356:-1:exon
so has part: feature:778616-778742:-1:exon
so has part: feature:778025-778208:-1:exon
so has part: feature:777272-777441:-1:exon
so has part: feature:776852-777030:-1:exon
so has part: feature:776519-776657:-1:exon
so has part: feature:775838-776031:-1:exon
so has part: feature:775507-775669:-1:exon
so has part: feature:775118-775201:-1:exon
so has part: feature:774811-774918:-1:exon
so has part: feature:774078-774176:-1:exon
so has part: feature:773713-773868:-1:exon
so has part: feature:773400-773488:-1:exon
so has part: feature:772813-772948:-1:exon
so has part: feature:760416-760565:-1:exon
so has part: feature:760084-760317:-1:exon
so has part: feature:759661-759888:-1:exon
so has part: feature:759027-759548:-1:exon
so has part: feature:758502-758678:-1:exon
so has part: feature:757968-758091:-1:exon
so has part: feature:757479-757687:-1:exon
so has part: feature:757030-757347:-1:exon
so has part: feature:756073-756239:-1:exon
so has part: feature:754919-755075:-1:exon
so has part: feature:754021-754138:-1:exon
so has part: feature:752314-752376:-1:exon
so has part: feature:751286-751527:-1:exon
so has part: feature:750704-750833:-1:exon
so has part: feature:749720-749919:-1:exon
so has part: feature:748537-749032:-1:exon
so has part: feature:746540-748011:-1:exon
so has part: feature:729092-729253:-1:exon
so has part: feature:728788-728958:-1:exon
so has part: feature:727787-727953:-1:exon
so has part: feature:726261-726420:-1:exon
so has part: feature:725449-725775:-1:exon
so has part: feature:724749-724833:-1:exon
so has part: feature:723632-723873:-1:exon
so has part: feature:723013-723219:-1:exon
so has part: feature:722205-722324:-1:exon
so has part: feature:720936-721043:-1:exon
so has part: feature:720360-720578:-1:exon
so has part: feature:719640-719843:-1:exon
so has part: feature:718775-718783:-1:exon
so has part: feature:717394-717625:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:830961-831195:-1:exon

position:830961:-1
position: 830961
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:799492-799553:-1:exon

position:799492:-1
position: 799492
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:799553:-1
position: 799553
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:798508-798597:-1:exon

position:798508:-1
position: 798508
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:798597:-1
position: 798597
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:795937-796014:-1:exon

position:795937:-1
position: 795937
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:796014:-1
position: 796014
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:794242-794334:-1:exon

position:794242:-1
position: 794242
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:794334:-1
position: 794334
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:788227-788393:-1:exon

position:788227:-1
position: 788227
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:788393:-1
position: 788393
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:787622-787734:-1:exon

position:787622:-1
position: 787622
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:787734:-1
position: 787734
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:787424-787530:-1:exon

position:787424:-1
position: 787424
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:787530:-1
position: 787530
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:786846-786965:-1:exon

position:786846:-1
position: 786846
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:786965:-1
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position: 706831
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 87
SIO_000628: feature:706315-706326:-1:exon

position:706315:-1
position: 706315
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:706326:-1
position: 706326
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 88
SIO_000628: feature:705352-705514:-1:exon

position:705352:-1
position: 705352
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:705514:-1
position: 705514
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 89
SIO_000628: feature:705053-705207:-1:exon

position:705053:-1
position: 705053
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:705207:-1
position: 705207
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 90
SIO_000628: feature:704735-704809:-1:exon

position:704735:-1
position: 704735
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:704809:-1
position: 704809
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 91
SIO_000628: feature:703956-703973:-1:exon

position:703956:-1
position: 703956
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:703973:-1
position: 703973
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 92
SIO_000628: feature:701663-701780:-1:exon

position:701663:-1
position: 701663
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:701780:-1
position: 701780
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 93
SIO_000628: feature:700512-700723:-1:exon

position:700512:-1
position: 700512
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:700723:-1
position: 700723
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 94
SIO_000628: feature:699863-699973:-1:exon

position:699863:-1
position: 699863
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:699973:-1
position: 699973
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 95
SIO_000628: feature:698066-698189:-1:exon

position:698066:-1
position: 698066
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:698189:-1
position: 698189
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 96
SIO_000628: feature:696374-697929:-1:exon

position:697929:-1
position: 697929
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

MACF1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8839
gene: MACF1
exception: unclassified translation discrepancy
note: The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: deleted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: LOW QUALITY PROTEIN: microtubule-actin cross-linking factor 1
translation: MSSSDEETLSERSCRSERSCRSERSYRSERSGSLSPCPPGDTLPWNLPLHEQKKRKSQDSVLDPAERAVVRVADERDRVQKKTFTKWVNKHLMKVRKHINDLYEDLRDGHNLISLLEVLSGVKLPREKGRMRFHRLQNVQIALDFLKQRQVKLVNIRNDDITDGNPKLTLGLIWTIILHFQISDIYISGESGDMSAKEKLLLWTQKVTAGYIGVKCTNFSSCWSDGKMFNALIHRYRPDLVDMERVQIQSNRENLEQAFEIAERLGVTRLLDAEDVDVASPDEKSVITYVSSIYDAFPKVPEGGEGISAIEVDSRWLEYQTRVESLISWIKQHTILMSDKSFPQNPVELKALYNQYIHFKETEIPAREQEKGRIEELYKLLEVWIEFGRIKLPQGYHPNDVEEEWGKLIIEMLEREKLLRPAVERLELLLQIANKIQNGALSCEEKLTLAKNTLQADAAHLESGQPVQYESDVVVYLQECEGLIRQLQVDVQILRDENYYQLEELVFRIMRLQDELVTLRLECTNLYRKGHFSTLELAPASTLSTTQVKGEPLTKGLHTSSASWFRKPMTRTELVAISSSEDEGSLRFVYELLAWVEEMQMRLERAEWGSDLPSVEAQLEAQRHIHASVEDLGSSVKEARVYEGKMSQNFRASYTETLGKLETQYCKLMETSSFRLRHLQSLHGFVSRATAELIWLNEKEEEELAYDWSDNNPNIAAKKNYFSELTMELEEKQDILRSLQDTAELLSLENHPAKQTVEAYSAAVQTQWQWIKQLCLCVEQHVKENAAYFQFFSDARESETYLRNLQDSIKRKYSCDHNTSLTRLEDLLQDSMDEKEQLIQSKSSVASLVGRSKTIVQLRPRNPEHLVKSTIPIKAVCDYRQIEITICRNDECVLEDNSQRTKWKVISPTGNEAMVPSVCFLIPPPNKEAIEVANRVEQLYQKVMALWHQLHMNTKSLISWNYLRKDIALVQSFSMEKLRSLAQGECQQAMRSLQAHYEDFLQDSRDSELFSVSDRLRLEEEVEASKEHIRQLLESMENEDKDETVARTYLSELKNIRLRLEECEQRLVSRIQSPSSTRADGDSIQENTLRIAEQERVQEDLQKLKSDLRYVSERCYSFLDKAPAGSSTPHLRSELDLVVNKMEQMYGLSSIYLDKLKTVDVIIRSTQGAESLVKGYEVKLSQEEAVPADLTAIQSHRTALQQWLGEVKDKSSVFSVLKEEMAKAKAVGEQLYQLRQERSIDLERFQEKESQLWDRWQRVCTQIETRHTELESIQEVLSDYRQCHSALIQWIEEITIQQELMKPGQAEDSRVLSEQLSQQTALAAEIEKNQAKLDQCQKFSQQYSAAVKDYELQLMTYRAFVESQQKSPMKRRRMLSSSDAITQEFMDLRTRYTALVTLTTQHVKYISDALRRLEEEEKVVEEEKQEHVDKVKELLGWASGLRQSVQGRTAAARSSRELGDIEKSISEQQALNEELAAKKEQVSEAIKTSQIFLAKHSHKLSHQEKEQISAQIAALKDTYQALCSDSTEQLQQLQSQLAQEAEHKTLQEQQAARAQNLAELSTWLEAAEDTLAEQQRAASEGDLSTLQQRQSDVKELQRNMHTRAASFASILKTTEEFLEENKTKMEPGELAALQEKLRRAKEQYQSLQERTEMAQKELESAVTAAVQQETEKVKAAKELEENSNKIDSLLSWVASLEQKGELLEYRPHPIEPAPGVRAGQDAWSVPDGHVVEADSTAENLDEQYERLKAQHQELLSQQQDVILATQSAQAFLDKHGHSLPGEERAVLQGRLAELKERYAASLGQSETRLKQVQVLRDELQKFLRDHGEFEAWLKQAEQDLEGMYKGDSDPASLRQLLQRQGSFSEDVISHKGDLRFVTMSGQKVLDAEGAARDAGSQPLASGSVVKSKLEDATQRYTTLHSKCTKLGSHLSTLLEHYQQFQEVAESLRTWLQDSEAAVGKLLSETVSSDPAALQQQLASAGQLQGNLAEHQVPVEKLQKA…
SIO_010081: MACF1
subclass of: SO_0000673
so part of: MACF1
location: complement(join(697673..697929,698066..698189,699863..699973,700512..700723,701663..701780,703956..703973,704735..704809,705053..705207,705352..705514,706315..706326,706668..706831,707395..707512,707885..708073,708229..708372,708759..708887,709632..709826,710535..710694,710886..711055,711281..711400,711532..711738,711865..712020,712842..713015,713334..713462,713846..714043,714199..714354,714461..714634,714741..714842,715247..715348,715454..715576,716588..716814,717394..717625,718775..718783,719640..719843,720360..720578,720936..721043,722205..722324,723013..723219,723632..723873,724749..724833,725449..725775,726261..726420,727787..727953,728788..728958,729092..729253,746540..748011,748537..749032,749720..749919,750704..750833,751286..751527,752314..752376,754021..754138,754919..755075,756073..756239,757030..757347,757479..757687,757968..758091,758502..758678,759027..759548,759661..759888,760084..760317,760416..760565,772813..772948,773400..773488,773713..773868,774078..774176,774811..774918,775118..775201,775507..775669,775838..776031,776519..776657,776852..777030,777272..777441,778025..778208,778616..778742,779202..779356,779796..779948,781872..781997,782410..782505,783064..783168,783659..783820,783974..784051,784269..784397,784774..785051,785191..785345,786082..786175,786265..786392,786644..786739,786846..786965,787424..787530,787622..787734,788227..788393,794242..794334,795937..796014,798508..798597,799492..799553,830961..831180))
location: region:697673-831180:-1
so has part: feature:830961-831180:-1:exon
so has part: feature:799492-799553:-1:exon
so has part: feature:798508-798597:-1:exon
so has part: feature:795937-796014:-1:exon
so has part: feature:794242-794334:-1:exon
so has part: feature:788227-788393:-1:exon
so has part: feature:787622-787734:-1:exon
so has part: feature:787424-787530:-1:exon
so has part: feature:786846-786965:-1:exon
so has part: feature:786644-786739:-1:exon
so has part: feature:786265-786392:-1:exon
so has part: feature:786082-786175:-1:exon
so has part: feature:785191-785345:-1:exon
so has part: feature:784774-785051:-1:exon
so has part: feature:784269-784397:-1:exon
so has part: feature:783974-784051:-1:exon
so has part: feature:783659-783820:-1:exon
so has part: feature:783064-783168:-1:exon
so has part: feature:782410-782505:-1:exon
so has part: feature:781872-781997:-1:exon
so has part: feature:779796-779948:-1:exon
so has part: feature:779202-779356:-1:exon
so has part: feature:778616-778742:-1:exon
so has part: feature:778025-778208:-1:exon
so has part: feature:777272-777441:-1:exon
so has part: feature:776852-777030:-1:exon
so has part: feature:776519-776657:-1:exon
so has part: feature:775838-776031:-1:exon
so has part: feature:775507-775669:-1:exon
so has part: feature:775118-775201:-1:exon
so has part: feature:774811-774918:-1:exon
so has part: feature:774078-774176:-1:exon
so has part: feature:773713-773868:-1:exon
so has part: feature:773400-773488:-1:exon
so has part: feature:772813-772948:-1:exon
so has part: feature:760416-760565:-1:exon
so has part: feature:760084-760317:-1:exon
so has part: feature:759661-759888:-1:exon
so has part: feature:759027-759548:-1:exon
so has part: feature:758502-758678:-1:exon
so has part: feature:757968-758091:-1:exon
so has part: feature:757479-757687:-1:exon
so has part: feature:757030-757347:-1:exon
so has part: feature:756073-756239:-1:exon
so has part: feature:754919-755075:-1:exon
so has part: feature:754021-754138:-1:exon
so has part: feature:752314-752376:-1:exon
so has part: feature:751286-751527:-1:exon
so has part: feature:750704-750833:-1:exon
so has part: feature:749720-749919:-1:exon
so has part: feature:748537-749032:-1:exon
so has part: feature:746540-748011:-1:exon
so has part: feature:729092-729253:-1:exon
so has part: feature:728788-728958:-1:exon
so has part: feature:727787-727953:-1:exon
so has part: feature:726261-726420:-1:exon
so has part: feature:725449-725775:-1:exon
so has part: feature:724749-724833:-1:exon
so has part: feature:723632-723873:-1:exon
so has part: feature:723013-723219:-1:exon
so has part: feature:722205-722324:-1:exon
so has part: feature:720936-721043:-1:exon
so has part: feature:720360-720578:-1:exon
so has part: feature:719640-719843:-1:exon
so has part: feature:718775-718783:-1:exon

XP_038023101.1
type: Protein
SIO_000068: ncbiprotein

position:697673:-1
position: 697673
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:831180:-1
position: 831180
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:830961-831180:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:799492-799553:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:798508-798597:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:795937-796014:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:794242-794334:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:788227-788393:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:787622-787734:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:787424-787530:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:786846-786965:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:786644-786739:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:786265-786392:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:786082-786175:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:785191-785345:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:784774-785051:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:784269-784397:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:783974-784051:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:783659-783820:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:783064-783168:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:782410-782505:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:781872-781997:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:779796-779948:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:779202-779356:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:778616-778742:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:778025-778208:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:777272-777441:-1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:776852-777030:-1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:776519-776657:-1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:775838-776031:-1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:775507-775669:-1:exon

urn:…
SIO_000300: 30
SIO_000628: feature:775118-775201:-1:exon

urn:…
SIO_000300: 31
SIO_000628: feature:774811-774918:-1:exon

urn:…
SIO_000300: 32
SIO_000628: feature:774078-774176:-1:exon

urn:…
SIO_000300: 33
SIO_000628: feature:773713-773868:-1:exon

urn:…
SIO_000300: 34
SIO_000628: feature:773400-773488:-1:exon

urn:…
SIO_000300: 35
SIO_000628: feature:772813-772948:-1:exon

urn:…
SIO_000300: 36
SIO_000628: feature:760416-760565:-1:exon

urn:…
SIO_000300: 37
SIO_000628: feature:760084-760317:-1:exon