Anas platyrhynchos isolate Z2 breed Pekin duck chromosome 12, ZJU1.0, whole genome shotgun sequence.
type: Entry
definition: Anas platyrhynchos isolate Z2 breed Pekin duck chromosome 12, ZJU1.0, whole genome shotgun sequence.
sequence version: NC_051783.1
sequence date: 2020-12-15
sequence: sequence
division: CON
label: NC_051783.1
type: RefSeq
SIO_000068: refseq
dblink: PRJNA681492
dblink: SAMN15588841
keyword: WGS
keyword: RefSeq
source: Anas platyrhynchos (mallard)
organism: Anas platyrhynchos
taxonomy: Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Galloanserae; Anseriformes; Anatidae; Anatinae; Anas.
comment: REFSEQ INFORMATION: The reference sequence is identical to\nCM027254.1.\nAssembly name: ZJU1.0\nThe genomic sequence for this RefSeq record is from the\nwhole-genome assembly released by the Zhejiang University on\n2020/11/23. The original whole-genome shotgun project has the\naccession JACGAL000000000.1.\n\n##Genome-Assembly-Data-START##\nAssembly Provider :: Zhejiang University\nAssembly Method :: FALCON-Unzip v. git 12072017\nAssembly Name :: ZJU1.0\nGenome Representation :: Full\nExpected Final Version :: No\nGenome Coverage :: 143.0x\nSequencing Technology :: PacBio RSII; PacBio Sequel\n##Genome-Assembly-Data-END##\n\n##Genome-Annotation-Data-START##\nAnnotation Provider :: NCBI\nAnnotation Status :: Full annotation\nAnnotation Name :: Anas platyrhynchos Annotation\n Release 104\nAnnotation Version :: 104\nAnnotation Pipeline :: NCBI eukaryotic genome annotation\n pipeline\nAnnotation Software Version :: 8.5\nAnnotation Method :: Best-placed RefSeq; Gnomon\nFeatures Annotated :: Gene; mRNA; CDS; ncRNA\n##Genome-Annotation-Data-END##

sequence
subclass of: SO_0000340
sequence length: 21610006
topology: linear
so has quality: SO_0000987
location: 1..21610006
location: region:1-21610006:1
RO_0002162: 8839

NC_051783
type: RefSeq
SIO_000068: refseq

PRJNA681492
type: BioProject
SIO_000068: bioproject

SAMN15588841
type: BioSample
SIO_000068: biosample

position:1:1
position: 1
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:21610006:1
position: 21610006
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

feature:1-21610006:1:source
so part of: sequence
organism: Anas platyrhynchos
mol type: genomic DNA
isolate: Z2
chromosome: 12
sex: pooled male and female
tissue type: multiple
dev stage: adult
breed: Pekin duck

8839
type: Taxonomy
SIO_000068: taxonomy

LOC119718175
type: Gene
subclass of: SO_0000704
RO_0002162: 8839
gene: LOC119718175
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 3337..4562
location: region:3337-4562:1
so has part: feature:3337-4562:1:exon
subclass of: SO_0000011

119718175
type: Gene
SIO_000068: ncbigene

position:3337:1
position: 3337
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4562:1
position: 4562
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3337-4562:1:exon

LOC119718175
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 8839
nc RNA class: lncRNA
gene: LOC119718175
product: uncharacterized LOC119718175
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
transcript id: XR_005268944.1
SIO_010081: LOC119718175
subclass of: SO_0000673
so part of: LOC119718175
location: join(3337..3549,3993..4130,4214..4303,4395..4562)
location: region:3337-4562:1
so has part: feature:3337-3549:1:exon
so has part: feature:3993-4130:1:exon
so has part: feature:4214-4303:1:exon
so has part: feature:4395-4562:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3337-3549:1:exon

position:3549:1
position: 3549
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:3993-4130:1:exon

position:3993:1
position: 3993
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4130:1
position: 4130
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:4214-4303:1:exon

position:4214:1
position: 4214
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4303:1
position: 4303
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:4395-4562:1:exon

position:4395:1
position: 4395
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC119718176
type: Gene
subclass of: SO_0000704
RO_0002162: 8839
gene: LOC119718176
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 4720..7232
location: region:4720-7232:1
so has part: feature:4720-7232:1:exon
subclass of: SO_0000011

119718176
type: Gene
SIO_000068: ncbigene

position:4720:1
position: 4720
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7232:1
position: 7232
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4720-7232:1:exon

LOC119718176
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 8839
nc RNA class: lncRNA
gene: LOC119718176
product: uncharacterized LOC119718176, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 27 samples with support for all annotated introns
transcript id: XR_005268946.1
SIO_010081: LOC119718176
subclass of: SO_0000673
so part of: LOC119718176
location: join(4720..5135,6466..7232)
location: region:4720-7232:1
so has part: feature:4720-5135:1:exon
so has part: feature:6466-7232:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:4720-5135:1:exon

position:5135:1
position: 5135
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:6466-7232:1:exon

position:6466:1
position: 6466
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC119718176
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 8839
nc RNA class: lncRNA
gene: LOC119718176
product: uncharacterized LOC119718176, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 70 samples with support for all annotated introns
transcript id: XR_005268945.1
SIO_010081: LOC119718176
subclass of: SO_0000673
so part of: LOC119718176
location: join(4720..5086,6466..7232)
location: region:4720-7232:1
so has part: feature:4720-5086:1:exon
so has part: feature:6466-7232:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:4720-5086:1:exon

position:5086:1
position: 5086
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:6466-7232:1:exon

LOC119718166
type: Gene
subclass of: SO_0000704
RO_0002162: 8839
gene: LOC119718166
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(20591..24025)
location: region:20591-24025:-1
so has part: feature:20591-24025:-1:exon
subclass of: SO_0000011

119718166
type: Gene
SIO_000068: ncbigene

position:20591:-1
position: 20591
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:24025:-1
position: 24025
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:20591-24025:-1:exon

LOC119718166
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 8839
nc RNA class: lncRNA
gene: LOC119718166
product: uncharacterized LOC119718166, transcript variant X5
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 16 samples with support for all annotated introns
transcript id: XR_005268918.1
SIO_010081: LOC119718166
subclass of: SO_0000673
so part of: LOC119718166
location: complement(join(20591..21357,22674..22776,23197..23814,23965..24025))
location: region:20591-24025:-1
so has part: feature:23965-24025:-1:exon
so has part: feature:23197-23814:-1:exon
so has part: feature:22674-22776:-1:exon
so has part: feature:20591-21357:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:23965-24025:-1:exon

position:23965:-1
position: 23965
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:23197-23814:-1:exon

position:23197:-1
position: 23197
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:23814:-1
position: 23814
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:22674-22776:-1:exon

position:22674:-1
position: 22674
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:22776:-1
position: 22776
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:20591-21357:-1:exon

position:21357:-1
position: 21357
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC119718166
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 8839
nc RNA class: lncRNA
gene: LOC119718166
product: uncharacterized LOC119718166, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 10 samples with support for all annotated introns
transcript id: XR_005268915.1
SIO_010081: LOC119718166
subclass of: SO_0000673
so part of: LOC119718166
location: complement(join(20591..21357,22513..22622,22711..22776,23738..23814,23965..24016))
location: region:20591-24016:-1
so has part: feature:23965-24016:-1:exon
so has part: feature:23738-23814:-1:exon
so has part: feature:22711-22776:-1:exon
so has part: feature:22513-22622:-1:exon
so has part: feature:20591-21357:-1:exon

position:24016:-1
position: 24016
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:23965-24016:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:23738-23814:-1:exon

position:23738:-1
position: 23738
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:22711-22776:-1:exon

position:22711:-1
position: 22711
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:22513-22622:-1:exon

position:22513:-1
position: 22513
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:22622:-1
position: 22622
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:20591-21357:-1:exon

LOC119718166
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 8839
nc RNA class: lncRNA
gene: LOC119718166
product: uncharacterized LOC119718166, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 47 samples with support for all annotated introns
transcript id: XR_005268914.1
SIO_010081: LOC119718166
subclass of: SO_0000673
so part of: LOC119718166
location: complement(join(20591..21357,22674..22776,23738..23814,23965..24016))
location: region:20591-24016:-1
so has part: feature:23965-24016:-1:exon
so has part: feature:23738-23814:-1:exon
so has part: feature:22674-22776:-1:exon
so has part: feature:20591-21357:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:23965-24016:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:23738-23814:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:22674-22776:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:20591-21357:-1:exon

LOC119718166
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 8839
nc RNA class: lncRNA
gene: LOC119718166
product: uncharacterized LOC119718166, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 6 samples with support for all annotated introns
transcript id: XR_005268917.1
SIO_010081: LOC119718166
subclass of: SO_0000673
so part of: LOC119718166
location: complement(join(20591..21357,22513..22622,22711..22776,23197..23928))
location: region:20591-23928:-1
so has part: feature:23197-23928:-1:exon
so has part: feature:22711-22776:-1:exon
so has part: feature:22513-22622:-1:exon
so has part: feature:20591-21357:-1:exon

position:23928:-1
position: 23928
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:23197-23928:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:22711-22776:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:22513-22622:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:20591-21357:-1:exon

LOC119718166
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 8839
nc RNA class: lncRNA
gene: LOC119718166
product: uncharacterized LOC119718166, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 18 samples with support for all annotated introns
transcript id: XR_005268916.1
SIO_010081: LOC119718166
subclass of: SO_0000673
so part of: LOC119718166
location: complement(join(20591..21357,22674..22776,23197..23928))
location: region:20591-23928:-1
so has part: feature:23197-23928:-1:exon
so has part: feature:22674-22776:-1:exon
so has part: feature:20591-21357:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:23197-23928:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:22674-22776:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:20591-21357:-1:exon

LOC119718167
type: Gene
subclass of: SO_0000704
RO_0002162: 8839
gene: LOC119718167
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(26693..35539)
location: region:26693-35539:-1
so has part: feature:26693-35539:-1:exon
subclass of: SO_0000011

119718167
type: Gene
SIO_000068: ncbigene

position:26693:-1
position: 26693
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:35539:-1
position: 35539
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:26693-35539:-1:exon

LOC119718167
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 8839
nc RNA class: lncRNA
gene: LOC119718167
product: uncharacterized LOC119718167, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 10 samples with support for all annotated introns
transcript id: XR_005268920.1
SIO_010081: LOC119718167
subclass of: SO_0000673
so part of: LOC119718167
location: complement(join(26693..26946,27402..27511,34706..34797,35231..35368,35479..35539))
location: region:26693-35539:-1
so has part: feature:35479-35539:-1:exon
so has part: feature:35231-35368:-1:exon
so has part: feature:34706-34797:-1:exon
so has part: feature:27402-27511:-1:exon
so has part: feature:26693-26946:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:35479-35539:-1:exon

position:35479:-1
position: 35479
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:35231-35368:-1:exon

position:35231:-1
position: 35231
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:35368:-1
position: 35368
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:34706-34797:-1:exon

position:34706:-1
position: 34706
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:34797:-1
position: 34797
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:27402-27511:-1:exon

position:27402:-1
position: 27402
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:27511:-1
position: 27511
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:26693-26946:-1:exon

position:26946:-1
position: 26946
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC119718168
type: Gene
subclass of: SO_0000704
RO_0002162: 8839
gene: LOC119718168
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(29136..30257)
location: region:29136-30257:-1
so has part: feature:29136-30257:-1:exon
subclass of: SO_0000011

119718168
type: Gene
SIO_000068: ncbigene

position:29136:-1
position: 29136
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:30257:-1
position: 30257
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:29136-30257:-1:exon

LOC119718168
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 8839
nc RNA class: lncRNA
gene: LOC119718168
product: uncharacterized LOC119718168
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 30 samples with support for all annotated introns
transcript id: XR_005268921.1
SIO_010081: LOC119718168
subclass of: SO_0000673
so part of: LOC119718168
location: complement(join(29136..29939,30035..30103,30203..30257))
location: region:29136-30257:-1
so has part: feature:30203-30257:-1:exon
so has part: feature:30035-30103:-1:exon
so has part: feature:29136-29939:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:30203-30257:-1:exon

position:30203:-1
position: 30203
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:30035-30103:-1:exon

position:30035:-1
position: 30035
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:30103:-1
position: 30103
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:29136-29939:-1:exon

position:29939:-1
position: 29939
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC119718167
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 8839
nc RNA class: lncRNA
gene: LOC119718167
product: uncharacterized LOC119718167, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 43 samples with support for all annotated introns
transcript id: XR_005268919.1
SIO_010081: LOC119718167
subclass of: SO_0000673
so part of: LOC119718167
location: complement(join(33728..33787,34706..34797,35231..35368,35479..35539))
location: region:33728-35539:-1
so has part: feature:35479-35539:-1:exon
so has part: feature:35231-35368:-1:exon
so has part: feature:34706-34797:-1:exon
so has part: feature:33728-33787:-1:exon

position:33728:-1
position: 33728
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:35479-35539:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:35231-35368:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:34706-34797:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:33728-33787:-1:exon

position:33787:-1
position: 33787
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC119718169
type: Gene
subclass of: SO_0000704
RO_0002162: 8839
gene: LOC119718169
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(38354..39310)
location: region:38354-39310:-1
so has part: feature:38354-39310:-1:exon
subclass of: SO_0000011

119718169
type: Gene
SIO_000068: ncbigene

position:38354:-1
position: 38354
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:39310:-1
position: 39310
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:38354-39310:-1:exon

LOC119718169
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 8839
nc RNA class: lncRNA
gene: LOC119718169
product: uncharacterized LOC119718169
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 7 samples with support for all annotated introns
transcript id: XR_005268922.1
SIO_010081: LOC119718169
subclass of: SO_0000673
so part of: LOC119718169
location: complement(join(38354..38380,38540..38602,39057..39310))
location: region:38354-39310:-1
so has part: feature:39057-39310:-1:exon
so has part: feature:38540-38602:-1:exon
so has part: feature:38354-38380:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:39057-39310:-1:exon

position:39057:-1
position: 39057
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:38540-38602:-1:exon

position:38540:-1
position: 38540
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:38602:-1
position: 38602
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:38354-38380:-1:exon

position:38380:-1
position: 38380
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC119718183
type: Gene
subclass of: SO_0000704
RO_0002162: 8839
gene: LOC119718183
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(41722..46524)
location: region:41722-46524:-1
so has part: feature:41722-46524:-1:exon
subclass of: SO_0000011

119718183
type: Gene
SIO_000068: ncbigene

position:41722:-1
position: 41722
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:46524:-1
position: 46524
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:41722-46524:-1:exon

LOC119718183
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 8839
nc RNA class: lncRNA
gene: LOC119718183
product: uncharacterized LOC119718183, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XR_005268959.1
SIO_010081: LOC119718183
subclass of: SO_0000673
so part of: LOC119718183
location: complement(join(41722..41799,41966..42031,44854..44994,46476..46524))
location: region:41722-46524:-1
so has part: feature:46476-46524:-1:exon
so has part: feature:44854-44994:-1:exon
so has part: feature:41966-42031:-1:exon
so has part: feature:41722-41799:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:46476-46524:-1:exon

position:46476:-1
position: 46476
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:44854-44994:-1:exon

position:44854:-1
position: 44854
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:44994:-1
position: 44994
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:41966-42031:-1:exon

position:41966:-1
position: 41966
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:42031:-1
position: 42031
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:41722-41799:-1:exon

position:41799:-1
position: 41799
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC119718183
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 8839
nc RNA class: lncRNA
gene: LOC119718183
product: uncharacterized LOC119718183, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XR_005268961.1
SIO_010081: LOC119718183
subclass of: SO_0000673
so part of: LOC119718183
location: complement(join(41722..41799,41966..42031,44854..44994,46349..46373))
location: region:41722-46373:-1
so has part: feature:46349-46373:-1:exon
so has part: feature:44854-44994:-1:exon
so has part: feature:41966-42031:-1:exon
so has part: feature:41722-41799:-1:exon

position:46373:-1
position: 46373
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:46349-46373:-1:exon

position:46349:-1
position: 46349
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:44854-44994:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:41966-42031:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:41722-41799:-1:exon

LOC119718183
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 8839
nc RNA class: lncRNA
gene: LOC119718183
product: uncharacterized LOC119718183, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XR_005268960.1
SIO_010081: LOC119718183
subclass of: SO_0000673
so part of: LOC119718183
location: complement(join(41722..41799,41966..42031,44854..44994,45182..45235))
location: region:41722-45235:-1
so has part: feature:45182-45235:-1:exon
so has part: feature:44854-44994:-1:exon
so has part: feature:41966-42031:-1:exon
so has part: feature:41722-41799:-1:exon

position:45235:-1
position: 45235
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:45182-45235:-1:exon

position:45182:-1
position: 45182
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:44854-44994:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:41966-42031:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:41722-41799:-1:exon

LOC119718173
type: Gene
subclass of: SO_0000704
RO_0002162: 8839
gene: LOC119718173
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(117895..118505)
location: region:117895-118505:-1
so has part: feature:117895-118505:-1:exon
subclass of: SO_0000011

119718173
type: Gene
SIO_000068: ncbigene

position:117895:-1
position: 117895
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:118505:-1
position: 118505
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:117895-118505:-1:exon

LOC119718173
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 8839
nc RNA class: lncRNA
gene: LOC119718173
product: uncharacterized LOC119718173, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 77 samples with support for all annotated introns
transcript id: XR_005268939.1
SIO_010081: LOC119718173
subclass of: SO_0000673
so part of: LOC119718173
location: complement(join(117895..118037,118138..118505))
location: region:117895-118505:-1
so has part: feature:118138-118505:-1:exon
so has part: feature:117895-118037:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:118138-118505:-1:exon

position:118138:-1
position: 118138
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:117895-118037:-1:exon

position:118037:-1
position: 118037
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC119718173
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 8839
nc RNA class: lncRNA
gene: LOC119718173
product: uncharacterized LOC119718173, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 48 samples with support for all annotated introns
transcript id: XR_005268940.1
SIO_010081: LOC119718173
subclass of: SO_0000673
so part of: LOC119718173
location: complement(join(117895..118063,118138..118505))
location: region:117895-118505:-1
so has part: feature:118138-118505:-1:exon
so has part: feature:117895-118063:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:118138-118505:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:117895-118063:-1:exon

position:118063:-1
position: 118063
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC113845196
type: Gene
subclass of: SO_0000704
RO_0002162: 8839
gene: LOC113845196
note: Derived by automated computational analysis using gene prediction method: Gnomon.
pseudo: true
so part of: sequence
location: complement(123363..131792)
location: region:123363-131792:-1
so has part: feature:123363-131792:-1:exon

113845196
type: Gene
SIO_000068: ncbigene

position:123363:-1
position: 123363
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:131792:-1
position: 131792
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:123363-131792:-1:exon

LOC113845196
type: Exon
subclass of: SO_0000147
RO_0002162: 8839
gene: LOC113845196
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 93% coverage of the annotated genomic feature by RNAseq alignments, including 44 samples with support for all annotated introns
pseudo: true
SIO_010081: LOC113845196
subclass of: SO_0000673
so part of: LOC113845196
location: complement(123363..124492)
location: region:123363-124492:-1
so has part: feature:123363-124492:-1:exon

position:124492:-1
position: 124492
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:123363-124492:-1:exon

LOC113845196
type: Exon
subclass of: SO_0000147
RO_0002162: 8839
gene: LOC113845196
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 93% coverage of the annotated genomic feature by RNAseq alignments, including 44 samples with support for all annotated introns
pseudo: true
SIO_010081: LOC113845196
subclass of: SO_0000673
so part of: LOC113845196
location: complement(124897..124994)
location: region:124897-124994:-1
so has part: feature:124897-124994:-1:exon

position:124897:-1
position: 124897
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:124994:-1
position: 124994
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:124897-124994:-1:exon

LOC113845196
type: Exon
subclass of: SO_0000147
RO_0002162: 8839
gene: LOC113845196
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 93% coverage of the annotated genomic feature by RNAseq alignments, including 44 samples with support for all annotated introns
pseudo: true
SIO_010081: LOC113845196
subclass of: SO_0000673
so part of: LOC113845196
location: complement(125668..126082)
location: region:125668-126082:-1
so has part: feature:125668-126082:-1:exon

position:125668:-1
position: 125668
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:126082:-1
position: 126082
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:125668-126082:-1:exon

LOC113845196
type: Exon
subclass of: SO_0000147
RO_0002162: 8839
gene: LOC113845196
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 93% coverage of the annotated genomic feature by RNAseq alignments, including 44 samples with support for all annotated introns
pseudo: true
SIO_010081: LOC113845196
subclass of: SO_0000673
so part of: LOC113845196
location: complement(126765..126992)
location: region:126765-126992:-1
so has part: feature:126765-126992:-1:exon

position:126765:-1
position: 126765
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:126992:-1
position: 126992
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:126765-126992:-1:exon

LOC113845196
type: Exon
subclass of: SO_0000147
RO_0002162: 8839
gene: LOC113845196
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 93% coverage of the annotated genomic feature by RNAseq alignments, including 44 samples with support for all annotated introns
pseudo: true
SIO_010081: LOC113845196
subclass of: SO_0000673
so part of: LOC113845196
location: complement(127125..127267)
location: region:127125-127267:-1
so has part: feature:127125-127267:-1:exon

position:127125:-1
position: 127125
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:127267:-1
position: 127267
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:127125-127267:-1:exon

LOC113845196
type: Exon
subclass of: SO_0000147
RO_0002162: 8839
gene: LOC113845196
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 93% coverage of the annotated genomic feature by RNAseq alignments, including 44 samples with support for all annotated introns
pseudo: true
SIO_010081: LOC113845196
subclass of: SO_0000673
so part of: LOC113845196
location: complement(127693..127816)
location: region:127693-127816:-1
so has part: feature:127693-127816:-1:exon

position:127693:-1
position: 127693
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:127816:-1
position: 127816
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:127693-127816:-1:exon

LOC113845196
type: Exon
subclass of: SO_0000147
RO_0002162: 8839
gene: LOC113845196
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 93% coverage of the annotated genomic feature by RNAseq alignments, including 44 samples with support for all annotated introns
pseudo: true
SIO_010081: LOC113845196
subclass of: SO_0000673
so part of: LOC113845196
location: complement(130789..130939)
location: region:130789-130939:-1
so has part: feature:130789-130939:-1:exon

position:130789:-1
position: 130789
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:130939:-1
position: 130939
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:130789-130939:-1:exon

LOC113845196
type: Exon
subclass of: SO_0000147
RO_0002162: 8839
gene: LOC113845196
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 93% coverage of the annotated genomic feature by RNAseq alignments, including 44 samples with support for all annotated introns
pseudo: true
SIO_010081: LOC113845196
subclass of: SO_0000673
so part of: LOC113845196
location: complement(131566..131792)
location: region:131566-131792:-1
so has part: feature:131566-131792:-1:exon

position:131566:-1
position: 131566
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:131566-131792:-1:exon

LOC101804775
type: Gene
subclass of: SO_0000704
RO_0002162: 8839
gene: LOC101804775
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(134083..141887)
location: region:134083-141887:-1
so has part: feature:134083-141887:-1:exon
subclass of: SO_0000010

101804775
type: Gene
SIO_000068: ncbigene

position:134083:-1
position: 134083
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:141887:-1
position: 141887
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:134083-141887:-1:exon

LOC101804775
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8839
gene: LOC101804775
product: carbohydrate sulfotransferase 5, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 103 samples with support for all annotated introns
transcript id: XM_038185445.1
SIO_010081: LOC101804775
subclass of: SO_0000673
so part of: LOC101804775
location: complement(join(134083..135618,141750..141887))
location: region:134083-141887:-1
so has part: feature:141750-141887:-1:exon
so has part: feature:134083-135618:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:141750-141887:-1:exon

position:141750:-1
position: 141750
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:134083-135618:-1:exon

position:135618:-1
position: 135618
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC101804775
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8839
gene: LOC101804775
product: carbohydrate sulfotransferase 5, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 17 samples with support for all annotated introns
transcript id: XM_038185441.1
SIO_010081: LOC101804775
subclass of: SO_0000673
so part of: LOC101804775
location: complement(join(134083..135618,140262..140394,140700..141765))
location: region:134083-141765:-1
so has part: feature:140700-141765:-1:exon
so has part: feature:140262-140394:-1:exon
so has part: feature:134083-135618:-1:exon

position:141765:-1
position: 141765
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:140700-141765:-1:exon

position:140700:-1
position: 140700
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:140262-140394:-1:exon

position:140262:-1
position: 140262
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:140394:-1
position: 140394
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:134083-135618:-1:exon

LOC101804775
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8839
gene: LOC101804775
product: carbohydrate sulfotransferase 5, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 125 samples with support for all annotated introns
transcript id: XM_038185443.1
SIO_010081: LOC101804775
subclass of: SO_0000673
so part of: LOC101804775
location: complement(join(134083..135618,140700..141263))
location: region:134083-141263:-1
so has part: feature:140700-141263:-1:exon
so has part: feature:134083-135618:-1:exon

position:141263:-1
position: 141263
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:140700-141263:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:134083-135618:-1:exon

LOC101804775
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8839
gene: LOC101804775
product: carbohydrate sulfotransferase 5, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 17 samples with support for all annotated introns
transcript id: XM_038185444.1
SIO_010081: LOC101804775
subclass of: SO_0000673
so part of: LOC101804775
location: complement(join(134083..135618,137902..137979,140700..141263))
location: region:134083-141263:-1
so has part: feature:140700-141263:-1:exon
so has part: feature:137902-137979:-1:exon
so has part: feature:134083-135618:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:140700-141263:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:137902-137979:-1:exon

position:137902:-1
position: 137902
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:137979:-1
position: 137979
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:134083-135618:-1:exon

LOC101804775
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8839
gene: LOC101804775
product: carbohydrate sulfotransferase 5, transcript variant X5
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 11 samples with support for all annotated introns
transcript id: XM_038185446.1
SIO_010081: LOC101804775
subclass of: SO_0000673
so part of: LOC101804775
location: complement(join(134083..135618,135734..137881))
location: region:134083-137881:-1
so has part: feature:135734-137881:-1:exon
so has part: feature:134083-135618:-1:exon

position:137881:-1
position: 137881
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:135734-137881:-1:exon

position:135734:-1
position: 135734
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:134083-135618:-1:exon

LOC101804775
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8839
gene: LOC101804775
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: carbohydrate sulfotransferase 5 isoform X1
translation: MADPSQGVFAGIRLLNQVLWRAFPAVPGKSLPTSLKCPASVCSFFNCFSSVRMARIRISSTIVILFVMVQTGFLVFMYARYSSFMLQSEEKPSQVHILILSSWRSGSSFVGQLFSQHPSVFYLMEPAWHVWVTMYQNSAKVLHMAVRDLVRSVFLCDMSVFDAYMPWKRNLSDLFQWAVSRALCSAPACDSFQRTDITSEMACKTLCGRYPFTKVEEACKTYSHVVIKEVRFFDLKVLYPLLTDPSLNLKIIHLVRDPRAVVKSREQSVKALARDNGIVLSTNGTKVEDSKYKVMQEICRSHVQIYETATLKPPSFLKDRYLMIRFEDLVRDPLSEISEMYKFADLSLTPTLKSWVYNITHGQGPGKKKEAFKITSRDAVNVSQAWRNVLSFQKIKKIQEVCKGAINMLGYQLVDSEKEQRDLSLDLVLPRRQNQFSWSSFNPKN
SIO_010081: LOC101804775
subclass of: SO_0000673
so part of: LOC101804775
location: complement(join(134409..135618,140262..140389))
location: region:134409-140389:-1
so has part: feature:140262-140389:-1:exon
so has part: feature:134409-135618:-1:exon

XP_038041369.1
type: Protein
SIO_000068: ncbiprotein

position:134409:-1
position: 134409
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:140389:-1
position: 140389
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:140262-140389:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:134409-135618:-1:exon

LOC101804775
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8839
gene: LOC101804775
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: carbohydrate sulfotransferase 5 isoform X2
translation: MARIRISSTIVILFVMVQTGFLVFMYARYSSFMLQSEEKPSQVHILILSSWRSGSSFVGQLFSQHPSVFYLMEPAWHVWVTMYQNSAKVLHMAVRDLVRSVFLCDMSVFDAYMPWKRNLSDLFQWAVSRALCSAPACDSFQRTDITSEMACKTLCGRYPFTKVEEACKTYSHVVIKEVRFFDLKVLYPLLTDPSLNLKIIHLVRDPRAVVKSREQSVKALARDNGIVLSTNGTKVEDSKYKVMQEICRSHVQIYETATLKPPSFLKDRYLMIRFEDLVRDPLSEISEMYKFADLSLTPTLKSWVYNITHGQGPGKKKEAFKITSRDAVNVSQAWRNVLSFQKIKKIQEVCKGAINMLGYQLVDSEKEQRDLSLDLVLPRRQNQFSWSSFNPKN
SIO_010081: LOC101804775
subclass of: SO_0000673
so part of: LOC101804775
location: complement(134409..135590)
location: region:134409-135590:-1
so has part: feature:134409-135590:-1:exon

XP_038041371.1
type: Protein
SIO_000068: ncbiprotein

position:135590:-1
position: 135590
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:134409-135590:-1:exon

LOC101804775
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8839
gene: LOC101804775
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: carbohydrate sulfotransferase 5 isoform X2
translation: MARIRISSTIVILFVMVQTGFLVFMYARYSSFMLQSEEKPSQVHILILSSWRSGSSFVGQLFSQHPSVFYLMEPAWHVWVTMYQNSAKVLHMAVRDLVRSVFLCDMSVFDAYMPWKRNLSDLFQWAVSRALCSAPACDSFQRTDITSEMACKTLCGRYPFTKVEEACKTYSHVVIKEVRFFDLKVLYPLLTDPSLNLKIIHLVRDPRAVVKSREQSVKALARDNGIVLSTNGTKVEDSKYKVMQEICRSHVQIYETATLKPPSFLKDRYLMIRFEDLVRDPLSEISEMYKFADLSLTPTLKSWVYNITHGQGPGKKKEAFKITSRDAVNVSQAWRNVLSFQKIKKIQEVCKGAINMLGYQLVDSEKEQRDLSLDLVLPRRQNQFSWSSFNPKN
SIO_010081: LOC101804775
subclass of: SO_0000673
so part of: LOC101804775
location: complement(134409..135590)
location: region:134409-135590:-1
so has part: feature:134409-135590:-1:exon

XP_038041372.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:134409-135590:-1:exon

LOC101804775
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8839
gene: LOC101804775
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: carbohydrate sulfotransferase 5 isoform X2
translation: MARIRISSTIVILFVMVQTGFLVFMYARYSSFMLQSEEKPSQVHILILSSWRSGSSFVGQLFSQHPSVFYLMEPAWHVWVTMYQNSAKVLHMAVRDLVRSVFLCDMSVFDAYMPWKRNLSDLFQWAVSRALCSAPACDSFQRTDITSEMACKTLCGRYPFTKVEEACKTYSHVVIKEVRFFDLKVLYPLLTDPSLNLKIIHLVRDPRAVVKSREQSVKALARDNGIVLSTNGTKVEDSKYKVMQEICRSHVQIYETATLKPPSFLKDRYLMIRFEDLVRDPLSEISEMYKFADLSLTPTLKSWVYNITHGQGPGKKKEAFKITSRDAVNVSQAWRNVLSFQKIKKIQEVCKGAINMLGYQLVDSEKEQRDLSLDLVLPRRQNQFSWSSFNPKN
SIO_010081: LOC101804775
subclass of: SO_0000673
so part of: LOC101804775
location: complement(134409..135590)
location: region:134409-135590:-1
so has part: feature:134409-135590:-1:exon

XP_038041373.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:134409-135590:-1:exon

LOC101804775
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8839
gene: LOC101804775
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: carbohydrate sulfotransferase 5 isoform X2
translation: MARIRISSTIVILFVMVQTGFLVFMYARYSSFMLQSEEKPSQVHILILSSWRSGSSFVGQLFSQHPSVFYLMEPAWHVWVTMYQNSAKVLHMAVRDLVRSVFLCDMSVFDAYMPWKRNLSDLFQWAVSRALCSAPACDSFQRTDITSEMACKTLCGRYPFTKVEEACKTYSHVVIKEVRFFDLKVLYPLLTDPSLNLKIIHLVRDPRAVVKSREQSVKALARDNGIVLSTNGTKVEDSKYKVMQEICRSHVQIYETATLKPPSFLKDRYLMIRFEDLVRDPLSEISEMYKFADLSLTPTLKSWVYNITHGQGPGKKKEAFKITSRDAVNVSQAWRNVLSFQKIKKIQEVCKGAINMLGYQLVDSEKEQRDLSLDLVLPRRQNQFSWSSFNPKN
SIO_010081: LOC101804775
subclass of: SO_0000673
so part of: LOC101804775
location: complement(134409..135590)
location: region:134409-135590:-1
so has part: feature:134409-135590:-1:exon

XP_038041374.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:134409-135590:-1:exon

TMEM231
type: Gene
subclass of: SO_0000704
RO_0002162: 8839
gene: TMEM231
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(141661..146903)
location: region:141661-146903:-1
so has part: feature:141661-146903:-1:exon
subclass of: SO_0000010

101793050
type: Gene
SIO_000068: ncbigene

position:141661:-1
position: 141661
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:146903:-1
position: 146903
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:141661-146903:-1:exon

TMEM231
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8839
gene: TMEM231
product: transmembrane protein 231, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 118 samples with support for all annotated introns
transcript id: XM_027466166.2
SIO_010081: TMEM231
subclass of: SO_0000673
so part of: TMEM231
location: complement(join(141661..142034,142924..143029,143163..143244,143834..143977,146376..146545,146617..146903))
location: region:141661-146903:-1
so has part: feature:146617-146903:-1:exon
so has part: feature:146376-146545:-1:exon
so has part: feature:143834-143977:-1:exon
so has part: feature:143163-143244:-1:exon
so has part: feature:142924-143029:-1:exon
so has part: feature:141661-142034:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:146617-146903:-1:exon

position:146617:-1
position: 146617
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:146376-146545:-1:exon

position:146376:-1
position: 146376
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:146545:-1
position: 146545
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:143834-143977:-1:exon

position:143834:-1
position: 143834
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:143977:-1
position: 143977
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:143163-143244:-1:exon

position:143163:-1
position: 143163
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:143244:-1
position: 143244
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:142924-143029:-1:exon

position:142924:-1
position: 142924
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:143029:-1
position: 143029
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:141661-142034:-1:exon

position:142034:-1
position: 142034
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

TMEM231
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8839
gene: TMEM231
product: transmembrane protein 231, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 126 samples with support for all annotated introns
transcript id: XM_027466165.2
SIO_010081: TMEM231
subclass of: SO_0000673
so part of: TMEM231
location: complement(join(141661..142035,142924..143029,143163..143244,143834..143977,145248..145376,146376..146545,146617..146903))
location: region:141661-146903:-1
so has part: feature:146617-146903:-1:exon
so has part: feature:146376-146545:-1:exon
so has part: feature:145248-145376:-1:exon
so has part: feature:143834-143977:-1:exon
so has part: feature:143163-143244:-1:exon
so has part: feature:142924-143029:-1:exon
so has part: feature:141661-142035:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:146617-146903:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:146376-146545:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:145248-145376:-1:exon

position:145248:-1
position: 145248
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:145376:-1
position: 145376
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:143834-143977:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:143163-143244:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:142924-143029:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:141661-142035:-1:exon

position:142035:-1
position: 142035
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

TMEM231
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8839
gene: TMEM231
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: transmembrane protein 231 isoform X2
translation: MAGVELFSHPTFYTRYRAGLCSAAALALLLIAVFTYVPPLLVAYRSHGFWLKQGAYREQPTVRFRYEVLFVATTGPGPGSFLAWSTFPAFNRLQEDRLRVPLLSRMSTLVMQSMAFLQFFSPVPGSQLYMNGDLKLNQRQLLNHCGLDTRYNVSVVNGTSPFAADYDLTNIIAAYRDRNVTTVFSDPNPVWMTGRAADTPFIINATIHYPEEVILISQDFGKSLNLPGSNMSAFSLSFSGSSVGLKCLCSRIRCSLQLQYHQFCRCLQCCPANSISPEEMPEKTLKKPSSKIST
SIO_010081: TMEM231
subclass of: SO_0000673
so part of: TMEM231
location: complement(join(141794..142034,142924..143029,143163..143244,143834..143977,146376..146545,146617..146758))
location: region:141794-146758:-1
so has part: feature:146617-146758:-1:exon
so has part: feature:146376-146545:-1:exon
so has part: feature:143834-143977:-1:exon
so has part: feature:143163-143244:-1:exon
so has part: feature:142924-143029:-1:exon
so has part: feature:141794-142034:-1:exon

XP_027321967.2
type: Protein
SIO_000068: ncbiprotein

position:141794:-1
position: 141794
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:146758:-1
position: 146758
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:146617-146758:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:146376-146545:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:143834-143977:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:143163-143244:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:142924-143029:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:141794-142034:-1:exon

TMEM231
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8839
gene: TMEM231
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: transmembrane protein 231 isoform X1
translation: MAGVELFSHPTFYTRYRAGLCSAAALALLLIAVFTYVPPLLVAYRSHGFWLKQGAYREQPTVRFRYEVLFVATTGPGPGSFLAWSTFPAFNRLQEDRLRVPLLSTREEDKNQDGKMDQLHFKLELPLQSTEHVVGVQLILIFSYQLYRMSTLVMQSMAFLQFFSPVPGSQLYMNGDLKLNQRQLLNHCGLDTRYNVSVVNGTSPFAADYDLTNIIAAYRDRNVTTVFSDPNPVWMTGRAADTPFIINATIHYPEEVILYQPGFWEIIKFAWIQYVSILLIFLWVFGRIKMFVFQNQVFTTTPISSVLPLSPVLSCKQHQS
SIO_010081: TMEM231
subclass of: SO_0000673
so part of: TMEM231
location: complement(join(141846..142035,142924..143029,143163..143244,143834..143977,145248..145376,146376..146545,146617..146758))
location: region:141846-146758:-1
so has part: feature:146617-146758:-1:exon
so has part: feature:146376-146545:-1:exon
so has part: feature:145248-145376:-1:exon
so has part: feature:143834-143977:-1:exon
so has part: feature:143163-143244:-1:exon
so has part: feature:142924-143029:-1:exon
so has part: feature:141846-142035:-1:exon

XP_027321966.2
type: Protein
SIO_000068: ncbiprotein

position:141846:-1
position: 141846
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:146617-146758:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:146376-146545:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:145248-145376:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:143834-143977:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:143163-143244:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:142924-143029:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:141846-142035:-1:exon

GABARAPL2
type: Gene
subclass of: SO_0000704
RO_0002162: 8839
gene: GABARAPL2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 147050..158725
location: region:147050-158725:1
so has part: feature:147050-158725:1:exon
subclass of: SO_0000010

106019872
type: Gene
SIO_000068: ncbigene

position:147050:1
position: 147050
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:158725:1
position: 158725
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:147050-158725:1:exon

GABARAPL2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8839
gene: GABARAPL2
product: GABA type A receptor associated protein like 2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 18 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 114 samples with support for all annotated introns
transcript id: XM_027466169.2
SIO_010081: GABARAPL2
subclass of: SO_0000673
so part of: GABARAPL2
location: join(147050..147301,147639..147694,152874..153046,155067..155160,158450..158725)
location: region:147050-158725:1
so has part: feature:147050-147301:1:exon
so has part: feature:147639-147694:1:exon
so has part: feature:152874-153046:1:exon
so has part: feature:155067-155160:1:exon
so has part: feature:158450-158725:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:147050-147301:1:exon

position:147301:1
position: 147301
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:147639-147694:1:exon

position:147639:1
position: 147639
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:147694:1
position: 147694
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:152874-153046:1:exon

position:152874:1
position: 152874
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:153046:1
position: 153046
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:155067-155160:1:exon

position:155067:1
position: 155067
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:155160:1
position: 155160
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:158450-158725:1:exon

position:158450:1
position: 158450
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

GABARAPL2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8839
gene: GABARAPL2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: gamma-aminobutyric acid receptor-associated protein-like 2
translation: MKWMFKEDHALEHRCVESAKIRAKYPDRVPVIVEKVSGSQIVDIDKRKYLVPSDITVAQFMWIIRKRIQLPSEKAIFLFVDKTVPQSSLTMGQLYEKEKDEDGFLYVAYSGENTFGF
SIO_010081: GABARAPL2
subclass of: SO_0000673
so part of: GABARAPL2
location: join(147268..147301,147639..147694,152874..153046,155067..155157)
location: region:147268-155157:1
so has part: feature:147268-147301:1:exon
so has part: feature:147639-147694:1:exon
so has part: feature:152874-153046:1:exon
so has part: feature:155067-155157:1:exon

XP_027321970.1
type: Protein
SIO_000068: ncbiprotein

position:147268:1
position: 147268
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:155157:1
position: 155157
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:147268-147301:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:147639-147694:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:152874-153046:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:155067-155157:1:exon

ADAT1
type: Gene
subclass of: SO_0000704
RO_0002162: 8839
gene: ADAT1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(160409..179817)
location: region:160409-179817:-1
so has part: feature:160409-179817:-1:exon
subclass of: SO_0000010

101805235
type: Gene
SIO_000068: ncbigene

position:160409:-1
position: 160409
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:179817:-1
position: 179817
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:160409-179817:-1:exon

ADAT1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8839
gene: ADAT1
product: adenosine deaminase tRNA specific 1, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 110 samples with support for all annotated introns
transcript id: XM_027466161.2
SIO_010081: ADAT1
subclass of: SO_0000673
so part of: ADAT1
location: complement(join(160409..161814,167986..168072,169598..169697,171409..171554,173912..174527,175188..175318,176109..176163,178337..178405,179153..179344,179695..179817))
location: region:160409-179817:-1
so has part: feature:179695-179817:-1:exon
so has part: feature:179153-179344:-1:exon
so has part: feature:178337-178405:-1:exon
so has part: feature:176109-176163:-1:exon
so has part: feature:175188-175318:-1:exon
so has part: feature:173912-174527:-1:exon
so has part: feature:171409-171554:-1:exon
so has part: feature:169598-169697:-1:exon
so has part: feature:167986-168072:-1:exon
so has part: feature:160409-161814:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:179695-179817:-1:exon

position:179695:-1
position: 179695
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:179153-179344:-1:exon

position:179153:-1
position: 179153
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:179344:-1
position: 179344
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:178337-178405:-1:exon

position:178337:-1
position: 178337
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:178405:-1
position: 178405
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:176109-176163:-1:exon

position:176109:-1
position: 176109
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:176163:-1
position: 176163
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:175188-175318:-1:exon

position:175188:-1
position: 175188
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:175318:-1
position: 175318
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:173912-174527:-1:exon

position:173912:-1
position: 173912
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:174527:-1
position: 174527
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:171409-171554:-1:exon

position:171409:-1
position: 171409
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:171554:-1
position: 171554
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:169598-169697:-1:exon

position:169598:-1
position: 169598
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:169697:-1
position: 169697
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:167986-168072:-1:exon

position:167986:-1
position: 167986
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:168072:-1
position: 168072
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:160409-161814:-1:exon

position:161814:-1
position: 161814
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

ADAT1
type: Miscellaneous RNA
subclass of: SO_0000673
RO_0002162: 8839
gene: ADAT1
product: adenosine deaminase tRNA specific 1, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 102 samples with support for all annotated introns
transcript id: XR_001195058.4
SIO_010081: ADAT1
so part of: ADAT1
location: complement(join(160409..160982,161223..161814,167986..168072,169598..169697,171409..171554,173912..174527,175188..175318,176109..176163,178337..178405,179153..179811))
location: region:160409-179811:-1
so has part: feature:179153-179811:-1:exon
so has part: feature:178337-178405:-1:exon
so has part: feature:176109-176163:-1:exon
so has part: feature:175188-175318:-1:exon
so has part: feature:173912-174527:-1:exon
so has part: feature:171409-171554:-1:exon
so has part: feature:169598-169697:-1:exon
so has part: feature:167986-168072:-1:exon
so has part: feature:161223-161814:-1:exon
so has part: feature:160409-160982:-1:exon

position:179811:-1
position: 179811
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:179153-179811:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:178337-178405:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:176109-176163:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:175188-175318:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:173912-174527:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:171409-171554:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:169598-169697:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:167986-168072:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:161223-161814:-1:exon

position:161223:-1
position: 161223
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:160409-160982:-1:exon

position:160982:-1
position: 160982
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

ADAT1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8839
gene: ADAT1
product: adenosine deaminase tRNA specific 1, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 123 samples with support for all annotated introns
transcript id: XM_005028788.5
SIO_010081: ADAT1
subclass of: SO_0000673
so part of: ADAT1
location: complement(join(161679..161814,167986..168072,169598..169697,171409..171511,173912..174527,175188..175318,176109..176163,178337..178405,179153..179815))
location: region:161679-179815:-1
so has part: feature:179153-179815:-1:exon
so has part: feature:178337-178405:-1:exon
so has part: feature:176109-176163:-1:exon
so has part: feature:175188-175318:-1:exon
so has part: feature:173912-174527:-1:exon
so has part: feature:171409-171511:-1:exon
so has part: feature:169598-169697:-1:exon
so has part: feature:167986-168072:-1:exon
so has part: feature:161679-161814:-1:exon

position:161679:-1
position: 161679
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:179815:-1
position: 179815
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:179153-179815:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:178337-178405:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:176109-176163:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:175188-175318:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:173912-174527:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:171409-171511:-1:exon

position:171511:-1
position: 171511
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:169598-169697:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:167986-168072:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:161679-161814:-1:exon

ADAT1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8839
gene: ADAT1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: tRNA-specific adenosine deaminase 1 isoform X1
translation: MWSADEIAELCYEHYRTRLPKQGKPDPNREWTSLAAVVKVESAARREVAARPGNLQVTKEVVAMGTGTKCIGQNKMRKTGDILNDSHAETVAKRSFQRYLLHQMCLAVSYQQCSIFIPGTETGKWKLKPNIIFVFFSSHTPCGDASIIPISEPENQLSKSMNGADAAGQSAQCSSNHDHLGFEDKKKLEKMSSNHIIKRMKNNDGGWFSMITEDLPVQQVFVKPEGNANPKSCECSAQMQAANETGLSRLKAVDVYRTGAKCVPGELDDARVPGIGYHRVGLLRVKPGRGVRTCSMSCSDKLARWNVLGCQGALLMHFLQYPVYLSAIIVGKCPYSQEAMRRAIIERCQHVSFLPDGFLTQEVKLLQSELRFEHSRQAVQEVQTNSKTKLVPCSAAISWSAVPEQPLDVTSDGFRQGTTKKGIGSHQSRSKICKVELFHAFQKLVTSISQENLPDTLRMKTLRTYWDYKEAASSYQEAWKVLRSQALLGWVKNAQEYLEFT
SIO_010081: ADAT1
subclass of: SO_0000673
so part of: ADAT1
location: complement(join(161682..161814,167986..168072,169598..169697,171409..171554,173912..174527,175188..175318,176109..176163,178337..178405,179153..179321))
location: region:161682-179321:-1
so has part: feature:179153-179321:-1:exon
so has part: feature:178337-178405:-1:exon
so has part: feature:176109-176163:-1:exon
so has part: feature:175188-175318:-1:exon
so has part: feature:173912-174527:-1:exon
so has part: feature:171409-171554:-1:exon
so has part: feature:169598-169697:-1:exon
so has part: feature:167986-168072:-1:exon
so has part: feature:161682-161814:-1:exon

XP_027321962.2
type: Protein
SIO_000068: ncbiprotein

position:161682:-1
position: 161682
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:179321:-1
position: 179321
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:179153-179321:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:178337-178405:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:176109-176163:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:175188-175318:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:173912-174527:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:171409-171554:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:169598-169697:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:167986-168072:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:161682-161814:-1:exon

ADAT1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8839
gene: ADAT1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: tRNA-specific adenosine deaminase 1 isoform X2
translation: MWSADEIAELCYEHYRTRLPKQGKPDPNREWTSLAAVVKVESAARREVAARPGNLQVTKEVVAMGTGTKCIGQNKMRKTGDILNDSHAETVAKRSFQRYLLHQMCLAVSYQQCSIFIPGTETGKWKLKPNIIFVFFSSHTPCGDASIIPISEPENQLSKSMNGADAAGQSAQCSSNHDHLGFEDKKKLEKMSSNHIIKRMKNNDGGWFSMITEDLPVQQVFVKPEGNANPKSCECSAQMQAANETGLSRLKAVDVYRTGAKCVPGELDDARVPGIGYHRVGLLRVKPGRGVRTCSMSCSDKLARWNVLGCQGALLMHFLQYPVYLSAIIVGKCPYSQEAMRRAIIERRLNCCNQNFDLNIAVRQSRKFKLTAKQNLFPVARLSVGVQFLNNLWMSPQMVSGREQQRRGLGAIRADPRSVKWNSSMHFKSW
SIO_010081: ADAT1
subclass of: SO_0000673
so part of: ADAT1
location: complement(join(168023..168072,169598..169697,171409..171511,173912..174527,175188..175318,176109..176163,178337..178405,179153..179321))
location: region:168023-179321:-1
so has part: feature:179153-179321:-1:exon
so has part: feature:178337-178405:-1:exon
so has part: feature:176109-176163:-1:exon
so has part: feature:175188-175318:-1:exon
so has part: feature:173912-174527:-1:exon
so has part: feature:171409-171511:-1:exon
so has part: feature:169598-169697:-1:exon
so has part: feature:168023-168072:-1:exon

XP_005028845.2
type: Protein
SIO_000068: ncbiprotein

position:168023:-1
position: 168023
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:179153-179321:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:178337-178405:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:176109-176163:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:175188-175318:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:173912-174527:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:171409-171511:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:169598-169697:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:168023-168072:-1:exon

ADAT1
type: Miscellaneous RNA
subclass of: SO_0000673
RO_0002162: 8839
gene: ADAT1
product: adenosine deaminase tRNA specific 1, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 54 samples with support for all annotated introns
transcript id: XR_005268847.1
SIO_010081: ADAT1
so part of: ADAT1
location: complement(join(168051..168072,169598..169697,169781..169882,171409..171554,173912..174527,175188..175318,176109..176163,178337..178405,179153..179816))
location: region:168051-179816:-1
so has part: feature:179153-179816:-1:exon
so has part: feature:178337-178405:-1:exon
so has part: feature:176109-176163:-1:exon
so has part: feature:175188-175318:-1:exon
so has part: feature:173912-174527:-1:exon
so has part: feature:171409-171554:-1:exon
so has part: feature:169781-169882:-1:exon
so has part: feature:169598-169697:-1:exon
so has part: feature:168051-168072:-1:exon

position:168051:-1
position: 168051
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:179816:-1
position: 179816
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:179153-179816:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:178337-178405:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:176109-176163:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:175188-175318:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:173912-174527:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:171409-171554:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:169781-169882:-1:exon

position:169781:-1
position: 169781
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:169882:-1
position: 169882
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:169598-169697:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:168051-168072:-1:exon

KARS1
type: Gene
subclass of: SO_0000704
RO_0002162: 8839
gene: KARS1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(179932..189949)
location: region:179932-189949:-1
so has part: feature:179932-189949:-1:exon
subclass of: SO_0000010

101793429
type: Gene
SIO_000068: ncbigene

position:179932:-1
position: 179932
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:189949:-1
position: 189949
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:179932-189949:-1:exon

KARS1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8839
gene: KARS1
product: lysyl-tRNA synthetase 1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 126 samples with support for all annotated introns
transcript id: XM_027466159.2
SIO_010081: KARS1
subclass of: SO_0000673
so part of: KARS1
location: complement(join(179932..180062,180298..180441,182075..182201,182444..182529,183214..183299,184075..184248,184338..184500,185374..185493,187275..187400,187581..187767,188070..188163,188578..188743,188954..189104,189821..189949))
location: region:179932-189949:-1
so has part: feature:189821-189949:-1:exon
so has part: feature:188954-189104:-1:exon
so has part: feature:188578-188743:-1:exon
so has part: feature:188070-188163:-1:exon
so has part: feature:187581-187767:-1:exon
so has part: feature:187275-187400:-1:exon
so has part: feature:185374-185493:-1:exon
so has part: feature:184338-184500:-1:exon
so has part: feature:184075-184248:-1:exon
so has part: feature:183214-183299:-1:exon
so has part: feature:182444-182529:-1:exon
so has part: feature:182075-182201:-1:exon
so has part: feature:180298-180441:-1:exon
so has part: feature:179932-180062:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:189821-189949:-1:exon

position:189821:-1
position: 189821
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:188954-189104:-1:exon

position:188954:-1
position: 188954
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:189104:-1
position: 189104
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:188578-188743:-1:exon

position:188578:-1
position: 188578
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:188743:-1
position: 188743
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:188070-188163:-1:exon

position:188070:-1
position: 188070
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:188163:-1
position: 188163
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:187581-187767:-1:exon

position:187581:-1
position: 187581
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:187767:-1
position: 187767
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:187275-187400:-1:exon

position:187275:-1
position: 187275
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:187400:-1
position: 187400
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:185374-185493:-1:exon

position:185374:-1
position: 185374
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:185493:-1
position: 185493
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:184338-184500:-1:exon

position:184338:-1
position: 184338
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:184500:-1
position: 184500
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:184075-184248:-1:exon

position:184075:-1
position: 184075
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:184248:-1
position: 184248
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:183214-183299:-1:exon

position:183214:-1
position: 183214
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:183299:-1
position: 183299
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:182444-182529:-1:exon

position:182444:-1
position: 182444
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:182529:-1
position: 182529
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:182075-182201:-1:exon

position:182075:-1
position: 182075
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:182201:-1
position: 182201
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:180298-180441:-1:exon

position:180298:-1
position: 180298
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:180441:-1
position: 180441
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:179932-180062:-1:exon

position:180062:-1
position: 180062
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

KARS1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8839
gene: KARS1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: lysine--tRNA ligase
translation: MAAAAERGCDVGDVEPRLSKNELKRRLKAERKIAEKEAKQKEQSEKHSNKPSLTSDSENNIGADEENLDPNQYYKIRSHAIQQLQGTNEDPYPHKFHVDLSLSDFIEKYSHLQPGDHLTDITVRVAGRIHAKRASGGKLIFYDLRGEGVKLQVMANSRLYKSEEEYFCINNKLRRGDIIGVEGNPGKTKKGELSIIPYEITLLSPCLHMLPHLHFGLKDKETRYRQRYLDLILNDYVRQKFITRAKIVTYIRSFLDELGFLEIETPMMNIIPGGAMARPFITYHNELDMNLYMRIAPELYHKMVVVGGLDRVYEIGRQFRNEGIDLTHNPEFTTCEFYMAYADYHDLMEITEKLLSGMVKHITGSYKITYHPDGQDGQAYEIDFTLPFRRISMVDELEKVLGVKFPSAESFETEETRRFFDDLCVARNVECPPPRTTARLLDRLVGEFLEVTCINPTFICDHPQIMSPLAKWHRTHRGLTERFELFVMKKEVCNAYTELNDPFRQRQLFEDQAKAKAAGDDEAMFIDENFCTALEYGLPPTAGWGMGIDRFAMFLTDSSNIKEVLLFPAMKPEDKRKEAQPEQPAEGTSV
SIO_010081: KARS1
subclass of: SO_0000673
so part of: KARS1
location: complement(join(179976..180062,180298..180441,182075..182201,182444..182529,183214..183299,184075..184248,184338..184500,185374..185493,187275..187400,187581..187767,188070..188163,188578..188743,188954..189104,189821..189882))
location: region:179976-189882:-1
so has part: feature:189821-189882:-1:exon
so has part: feature:188954-189104:-1:exon
so has part: feature:188578-188743:-1:exon
so has part: feature:188070-188163:-1:exon
so has part: feature:187581-187767:-1:exon
so has part: feature:187275-187400:-1:exon
so has part: feature:185374-185493:-1:exon
so has part: feature:184338-184500:-1:exon
so has part: feature:184075-184248:-1:exon
so has part: feature:183214-183299:-1:exon
so has part: feature:182444-182529:-1:exon
so has part: feature:182075-182201:-1:exon
so has part: feature:180298-180441:-1:exon
so has part: feature:179976-180062:-1:exon

XP_027321960.1
type: Protein
SIO_000068: ncbiprotein

position:179976:-1
position: 179976
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:189882:-1
position: 189882
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:189821-189882:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:188954-189104:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:188578-188743:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:188070-188163:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:187581-187767:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:187275-187400:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:185374-185493:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:184338-184500:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:184075-184248:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:183214-183299:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:182444-182529:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:182075-182201:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:180298-180441:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:179976-180062:-1:exon

LOC113844833
type: Gene
subclass of: SO_0000704
RO_0002162: 8839
gene: LOC113844833
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 189903..193344
location: region:189903-193344:1
so has part: feature:189903-193344:1:exon
subclass of: SO_0000010

113844833
type: Gene
SIO_000068: ncbigene

position:189903:1
position: 189903
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:193344:1
position: 193344
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:189903-193344:1:exon

LOC113844833
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8839
gene: LOC113844833
product: TERF2 interacting protein, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 126 samples with support for all annotated introns
transcript id: XM_038185448.1
SIO_010081: LOC113844833
subclass of: SO_0000673
so part of: LOC113844833
location: join(189903..190605,191466..193344)
location: region:189903-193344:1
so has part: feature:189903-190605:1:exon
so has part: feature:191466-193344:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:189903-190605:1:exon

position:190605:1
position: 190605
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:191466-193344:1:exon

position:191466:1
position: 191466
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC113844833
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8839
gene: LOC113844833
product: TERF2 interacting protein, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 126 samples with support for all annotated introns
transcript id: XM_027466164.2
SIO_010081: LOC113844833
subclass of: SO_0000673
so part of: LOC113844833
location: join(189903..190438,190526..190605,191466..193344)
location: region:189903-193344:1
so has part: feature:189903-190438:1:exon
so has part: feature:190526-190605:1:exon
so has part: feature:191466-193344:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:189903-190438:1:exon

position:190438:1
position: 190438
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:190526-190605:1:exon

position:190526:1
position: 190526
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:191466-193344:1:exon

LOC113844833
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8839
gene: LOC113844833
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: telomeric repeat-binding factor 2-interacting protein 1 isoform X1
translation: MAARGKAEAGRSRQLFLWDDGRPMRFYVRPGLTKLRLAPLLLAGGGRLCRIQEPDAVLLAQAGEQAPGGAVSAEYVTECIKRNQRLPLEPFRLPAAPPPPPAASPRGRLAFTEAEDAALLQAVRGRGGRRVGGRALWKELERAGLTRHSWQAMRDRYLRHLRPLRGGEQGAADGARGERRRRRPGPGSHRPSLPAEPKQAEEERARGMGIFEAANREFESDESESDTSDALEELPTQVGGGKPPGETASGLETGMEDCAFPGTQLQREDRPRSTCSSSSVVGEVVKTMRHFMERFNVDLFTVTQAFLKNTGEVETTSYFLQTGQRLDGYPVWSREDDLELQKDDEHVRSKLIAKFGAENVAKRVAFRKS
SIO_010081: LOC113844833
subclass of: SO_0000673
so part of: LOC113844833
location: join(189940..190605,191466..191909)
location: region:189940-191909:1
so has part: feature:189940-190605:1:exon
so has part: feature:191466-191909:1:exon

XP_038041376.1
type: Protein
SIO_000068: ncbiprotein

position:189940:1
position: 189940
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:191909:1
position: 191909
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:189940-190605:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:191466-191909:1:exon

LOC113844833
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8839
gene: LOC113844833
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: telomeric repeat-binding factor 2-interacting protein 1 isoform X2
translation: MAARGKAEAGRSRQLFLWDDGRPMRFYVRPGLTKLRLAPLLLAGGGRLCRIQEPDAVLLAQAGEQAPGGAVSAEYVTECIKRNQRLPLEPFRLPAAPPPPPAASPRGRLAFTEAEDAALLQAVRGRGGRRVGGRALWKELERAGLTRHSWQAMRDRYLRHLRPLRGEPKQAEEERARGMGIFEAANREFESDESESDTSDALEELPTQVGGGKPPGETASGLETGMEDCAFPGTQLQREDRPRSTCSSSSVVGEVVKTMRHFMERFNVDLFTVTQAFLKNTGEVETTSYFLQTGQRLDGYPVWSREDDLELQKDDEHVRSKLIAKFGAENVAKRVAFRKS
SIO_010081: LOC113844833
subclass of: SO_0000673
so part of: LOC113844833
location: join(189940..190438,190526..190605,191466..191909)
location: region:189940-191909:1
so has part: feature:189940-190438:1:exon
so has part: feature:190526-190605:1:exon
so has part: feature:191466-191909:1:exon

XP_027321965.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:189940-190438:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:190526-190605:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:191466-191909:1:exon

LOC101789562
type: Gene
subclass of: SO_0000704
RO_0002162: 8839
gene: LOC101789562
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(195984..208813)
location: region:195984-208813:-1
so has part: feature:195984-208813:-1:exon
subclass of: SO_0000010

101789562
type: Gene
SIO_000068: ncbigene

position:195984:-1
position: 195984
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:208813:-1
position: 208813
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:195984-208813:-1:exon

LOC101789562
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8839
gene: LOC101789562
product: carbohydrate sulfotransferase 4, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 30 samples with support for all annotated introns
transcript id: XM_038185447.1
SIO_010081: LOC101789562
subclass of: SO_0000673
so part of: LOC101789562
location: complement(join(195984..198095,206865..208813))
location: region:195984-208813:-1
so has part: feature:206865-208813:-1:exon
so has part: feature:195984-198095:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:206865-208813:-1:exon

position:206865:-1
position: 206865
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:195984-198095:-1:exon

position:198095:-1
position: 198095
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC101789562
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8839
gene: LOC101789562
product: carbohydrate sulfotransferase 4, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 27 samples with support for all annotated introns
transcript id: XM_013107973.4
SIO_010081: LOC101789562
subclass of: SO_0000673
so part of: LOC101789562
location: complement(join(195984..198095,201104..201291))
location: region:195984-201291:-1
so has part: feature:201104-201291:-1:exon
so has part: feature:195984-198095:-1:exon

position:201291:-1
position: 201291
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:201104-201291:-1:exon

position:201104:-1
position: 201104
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:195984-198095:-1:exon

LOC101789562
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8839
gene: LOC101789562
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: carbohydrate sulfotransferase 4 isoform X1
translation: MCRREALLEAGLVVLQEDMLRSLATMMKSRWVQVLLILAVLSFMIHFDFLTCSNAPMEEKPSPVHILILSSWRSGSSFTGQIFSQHPSVFYLMEPAWHVWVAMYQNSAKVLQMAVRDLVRSVFLCDMSVFDAYMSSQKKKSDLFQWETSRALCSPPACDSFSRNDIITARNCRTVCGKYPFSKVEEACKTYSHVAIKEVRFFDLKVLYSLFTDPSLNLKVIHLVRDPRAVFRSRENTVIGLKRDNDIVLGSQKMKEEMGPYNAMQEICKSHVEIYKAGRQAIPSFLKDRYLLVRYEDIVRDPLAKAAQMYRFAELHFTPELQKWVHNITHGKGQGGQAFEIGSRDALSVSEAWRKTLPFQKIEKVQNVCKDAMDLLGYRLVHSEEEQKNLLLDLLFGQNSSK
SIO_010081: LOC101789562
subclass of: SO_0000673
so part of: LOC101789562
location: complement(join(196949..198095,201104..201165))
location: region:196949-201165:-1
so has part: feature:201104-201165:-1:exon
so has part: feature:196949-198095:-1:exon

XP_012963427.3
type: Protein
SIO_000068: ncbiprotein

position:196949:-1
position: 196949
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:201165:-1
position: 201165
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:201104-201165:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:196949-198095:-1:exon

LOC101789562
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8839
gene: LOC101789562
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: carbohydrate sulfotransferase 4 isoform X2
translation: MMKSRWVQVLLILAVLSFMIHFDFLTCSNAPMEEKPSPVHILILSSWRSGSSFTGQIFSQHPSVFYLMEPAWHVWVAMYQNSAKVLQMAVRDLVRSVFLCDMSVFDAYMSSQKKKSDLFQWETSRALCSPPACDSFSRNDIITARNCRTVCGKYPFSKVEEACKTYSHVAIKEVRFFDLKVLYSLFTDPSLNLKVIHLVRDPRAVFRSRENTVIGLKRDNDIVLGSQKMKEEMGPYNAMQEICKSHVEIYKAGRQAIPSFLKDRYLLVRYEDIVRDPLAKAAQMYRFAELHFTPELQKWVHNITHGKGQGGQAFEIGSRDALSVSEAWRKTLPFQKIEKVQNVCKDAMDLLGYRLVHSEEEQKNLLLDLLFGQNSSK
SIO_010081: LOC101789562
subclass of: SO_0000673
so part of: LOC101789562
location: complement(196949..198082)
location: region:196949-198082:-1
so has part: feature:196949-198082:-1:exon

XP_038041375.1
type: Protein
SIO_000068: ncbiprotein

position:198082:-1
position: 198082
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:196949-198082:-1:exon

TAT
type: Gene
subclass of: SO_0000704
RO_0002162: 8839
gene: TAT
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(208964..218726)
location: region:208964-218726:-1
so has part: feature:208964-218726:-1:exon
subclass of: SO_0000010

101789874
type: Gene
SIO_000068: ncbigene

position:208964:-1
position: 208964
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:218726:-1
position: 218726
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:208964-218726:-1:exon

TAT
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8839
gene: TAT
product: tyrosine aminotransferase, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 11 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 28 samples with support for all annotated introns
transcript id: XM_005028790.5
SIO_010081: TAT
subclass of: SO_0000673
so part of: TAT
location: complement(join(208964..209675,210454..210552,212061..212144,212494..212622,213453..213605,213982..214034,214609..214747,214944..215102,215464..215531,216369..216473,216687..216929,218569..218726))
location: region:208964-218726:-1
so has part: feature:218569-218726:-1:exon
so has part: feature:216687-216929:-1:exon
so has part: feature:216369-216473:-1:exon
so has part: feature:215464-215531:-1:exon
so has part: feature:214944-215102:-1:exon
so has part: feature:214609-214747:-1:exon
so has part: feature:213982-214034:-1:exon
so has part: feature:213453-213605:-1:exon
so has part: feature:212494-212622:-1:exon
so has part: feature:212061-212144:-1:exon
so has part: feature:210454-210552:-1:exon
so has part: feature:208964-209675:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:218569-218726:-1:exon

position:218569:-1
position: 218569
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:216687-216929:-1:exon

position:216687:-1
position: 216687
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:216929:-1
position: 216929
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:216369-216473:-1:exon

position:216369:-1
position: 216369
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:216473:-1
position: 216473
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:215464-215531:-1:exon

position:215464:-1
position: 215464
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:215531:-1
position: 215531
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:214944-215102:-1:exon

position:214944:-1
position: 214944
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:215102:-1
position: 215102
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:214609-214747:-1:exon

position:214609:-1
position: 214609
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:214747:-1
position: 214747
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:213982-214034:-1:exon

position:213982:-1
position: 213982
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:214034:-1
position: 214034
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:213453-213605:-1:exon

position:213453:-1
position: 213453
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:213605:-1
position: 213605
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:212494-212622:-1:exon

position:212494:-1
position: 212494
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:212622:-1
position: 212622
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:212061-212144:-1:exon

position:212061:-1
position: 212061
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:212144:-1
position: 212144
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:210454-210552:-1:exon

position:210454:-1
position: 210454
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:210552:-1
position: 210552
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:208964-209675:-1:exon

position:209675:-1
position: 209675
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

TAT
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8839
gene: TAT
product: tyrosine aminotransferase, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 15 samples with support for all annotated introns
transcript id: XM_027466162.2
SIO_010081: TAT
subclass of: SO_0000673
so part of: TAT
location: complement(join(208964..209675,210454..210552,212061..212144,212344..212421,212494..212622,213453..213605,213982..214034,214609..214747,214944..215102,215464..215531,216369..216473,216687..216929,218569..218726))
location: region:208964-218726:-1
so has part: feature:218569-218726:-1:exon
so has part: feature:216687-216929:-1:exon
so has part: feature:216369-216473:-1:exon
so has part: feature:215464-215531:-1:exon
so has part: feature:214944-215102:-1:exon
so has part: feature:214609-214747:-1:exon
so has part: feature:213982-214034:-1:exon
so has part: feature:213453-213605:-1:exon
so has part: feature:212494-212622:-1:exon
so has part: feature:212344-212421:-1:exon
so has part: feature:212061-212144:-1:exon
so has part: feature:210454-210552:-1:exon
so has part: feature:208964-209675:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:218569-218726:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:216687-216929:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:216369-216473:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:215464-215531:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:214944-215102:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:214609-214747:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:213982-214034:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:213453-213605:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:212494-212622:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:212344-212421:-1:exon

position:212344:-1
position: 212344
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:212421:-1
position: 212421
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:212061-212144:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:210454-210552:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:208964-209675:-1:exon

TAT
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8839
gene: TAT
product: tyrosine aminotransferase, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 15 samples with support for all annotated introns
transcript id: XM_038185440.1
SIO_010081: TAT
subclass of: SO_0000673
so part of: TAT
location: complement(join(208964..209675,210454..210552,212061..212144,212344..212421,212494..212622,213453..213605,213982..214034,214609..214747,214944..215102,215464..215531,216369..216473,216687..216922,218569..218707))
location: region:208964-218707:-1
so has part: feature:218569-218707:-1:exon
so has part: feature:216687-216922:-1:exon
so has part: feature:216369-216473:-1:exon
so has part: feature:215464-215531:-1:exon
so has part: feature:214944-215102:-1:exon
so has part: feature:214609-214747:-1:exon
so has part: feature:213982-214034:-1:exon
so has part: feature:213453-213605:-1:exon
so has part: feature:212494-212622:-1:exon
so has part: feature:212344-212421:-1:exon
so has part: feature:212061-212144:-1:exon
so has part: feature:210454-210552:-1:exon
so has part: feature:208964-209675:-1:exon

position:218707:-1
position: 218707
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:218569-218707:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:216687-216922:-1:exon

position:216922:-1
position: 216922
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:216369-216473:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:215464-215531:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:214944-215102:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:214609-214747:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:213982-214034:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:213453-213605:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:212494-212622:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:212344-212421:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:212061-212144:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:210454-210552:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:208964-209675:-1:exon

TAT
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8839
gene: TAT
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: tyrosine aminotransferase isoform X2
translation: MDSYLIQVNGPGDHAPLLDVHLKTNGNSMSLGKVKGRKPRWAVRASEMSKKTFNPVRAIVDSMKVEPNPKKAMISLSLGDPTVFGNLPTNDEVTRAVKEVLDSGRYNGYAPSVGYQSCREAVAAYYNCPEAPLEAQDVILTSGCSQAIELALAVLANPGQNILVPRPGFSLYKTLALSMGIEVKLYNLLPEKSWEIDLKHLESLVDEKTACLIVNNPSNPCGSVFSKSHLQKILAVASRQCVPILADEIYGDMVFADCKYEPIATLSTNVPILSCGGLAKRWLVPGWRMGWILIHDRRDIFGNEIRDGLLRLSQRILGPCTIVQGALERILHQTPPEFYHNTLSILKSNADLCYAALSAIPGLQPVRPAGAMYLMVEIEMEHFPEFENDVEFTERLISEQSVFCLPATCFEYPNFFRVVITVPEEMILEACSRIQEFCEMHYQGAEGAQDLECDK
SIO_010081: TAT
subclass of: SO_0000673
so part of: TAT
location: complement(join(209532..209675,210454..210552,212061..212144,212494..212622,213453..213605,213982..214034,214609..214747,214944..215102,215464..215531,216369..216473,216687..216921))
location: region:209532-216921:-1
so has part: feature:216687-216921:-1:exon
so has part: feature:216369-216473:-1:exon
so has part: feature:215464-215531:-1:exon
so has part: feature:214944-215102:-1:exon
so has part: feature:214609-214747:-1:exon
so has part: feature:213982-214034:-1:exon
so has part: feature:213453-213605:-1:exon
so has part: feature:212494-212622:-1:exon
so has part: feature:212061-212144:-1:exon
so has part: feature:210454-210552:-1:exon
so has part: feature:209532-209675:-1:exon

XP_005028847.1
type: Protein
SIO_000068: ncbiprotein

position:209532:-1
position: 209532
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:216921:-1
position: 216921
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:216687-216921:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:216369-216473:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:215464-215531:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:214944-215102:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:214609-214747:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:213982-214034:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:213453-213605:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:212494-212622:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:212061-212144:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:210454-210552:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:209532-209675:-1:exon

TAT
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8839
gene: TAT
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: tyrosine aminotransferase isoform X1
translation: MDSYLIQVNGPGDHAPLLDVHLKTNGNSMSLGKVKGRKPRWAVRASEMSKKTFNPVRAIVDSMKVEPNPKKAMISLSLGDPTVFGNLPTNDEVTRAVKEVLDSGRYNGYAPSVGYQSCREAVAAYYNCPEAPLEAQDVILTSGCSQAIELALAVLANPGQNILVPRPGFSLYKTLALSMGIEVKLYNLLPEKSWEIDLKHLESLVDEKTACLIVNNPSNPCGSVFSKSHLQKILAVASRQCVPILADEIYGDMVFADCKYEPIATLSTNVPILSCGGLAKRWLVPGWRMGWILIHDRRDIFGNEIRDGLLRLSQRILGPCTIVQGALERILHQTPPEFYHNTLSILKPILMAGILAMTSFRKPSPAAKAVTQASNADLCYAALSAIPGLQPVRPAGAMYLMVEIEMEHFPEFENDVEFTERLISEQSVFCLPATCFEYPNFFRVVITVPEEMILEACSRIQEFCEMHYQGAEGAQDLECDK
SIO_010081: TAT
subclass of: SO_0000673
so part of: TAT
location: complement(join(209532..209675,210454..210552,212061..212144,212344..212421,212494..212622,213453..213605,213982..214034,214609..214747,214944..215102,215464..215531,216369..216473,216687..216921))
location: region:209532-216921:-1
so has part: feature:216687-216921:-1:exon
so has part: feature:216369-216473:-1:exon
so has part: feature:215464-215531:-1:exon
so has part: feature:214944-215102:-1:exon
so has part: feature:214609-214747:-1:exon
so has part: feature:213982-214034:-1:exon
so has part: feature:213453-213605:-1:exon
so has part: feature:212494-212622:-1:exon
so has part: feature:212344-212421:-1:exon
so has part: feature:212061-212144:-1:exon
so has part: feature:210454-210552:-1:exon
so has part: feature:209532-209675:-1:exon

XP_027321963.2
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:216687-216921:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:216369-216473:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:215464-215531:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:214944-215102:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:214609-214747:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:213982-214034:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:213453-213605:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:212494-212622:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:212344-212421:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:212061-212144:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:210454-210552:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:209532-209675:-1:exon

TAT
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8839
gene: TAT
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: tyrosine aminotransferase isoform X1
translation: MDSYLIQVNGPGDHAPLLDVHLKTNGNSMSLGKVKGRKPRWAVRASEMSKKTFNPVRAIVDSMKVEPNPKKAMISLSLGDPTVFGNLPTNDEVTRAVKEVLDSGRYNGYAPSVGYQSCREAVAAYYNCPEAPLEAQDVILTSGCSQAIELALAVLANPGQNILVPRPGFSLYKTLALSMGIEVKLYNLLPEKSWEIDLKHLESLVDEKTACLIVNNPSNPCGSVFSKSHLQKILAVASRQCVPILADEIYGDMVFADCKYEPIATLSTNVPILSCGGLAKRWLVPGWRMGWILIHDRRDIFGNEIRDGLLRLSQRILGPCTIVQGALERILHQTPPEFYHNTLSILKPILMAGILAMTSFRKPSPAAKAVTQASNADLCYAALSAIPGLQPVRPAGAMYLMVEIEMEHFPEFENDVEFTERLISEQSVFCLPATCFEYPNFFRVVITVPEEMILEACSRIQEFCEMHYQGAEGAQDLECDK
SIO_010081: TAT
subclass of: SO_0000673
so part of: TAT
location: complement(join(209532..209675,210454..210552,212061..212144,212344..212421,212494..212622,213453..213605,213982..214034,214609..214747,214944..215102,215464..215531,216369..216473,216687..216921))
location: region:209532-216921:-1
so has part: feature:216687-216921:-1:exon
so has part: feature:216369-216473:-1:exon
so has part: feature:215464-215531:-1:exon
so has part: feature:214944-215102:-1:exon
so has part: feature:214609-214747:-1:exon
so has part: feature:213982-214034:-1:exon
so has part: feature:213453-213605:-1:exon
so has part: feature:212494-212622:-1:exon
so has part: feature:212344-212421:-1:exon
so has part: feature:212061-212144:-1:exon
so has part: feature:210454-210552:-1:exon
so has part: feature:209532-209675:-1:exon

XP_038041368.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:216687-216921:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:216369-216473:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:215464-215531:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:214944-215102:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:214609-214747:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:213982-214034:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:213453-213605:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:212494-212622:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:212344-212421:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:212061-212144:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:210454-210552:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:209532-209675:-1:exon

MARVELD3
type: Gene
subclass of: SO_0000704
RO_0002162: 8839
gene: MARVELD3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 226087..227978
location: region:226087-227978:1
so has part: feature:226087-227978:1:exon
subclass of: SO_0000010

101793796
type: Gene
SIO_000068: ncbigene

position:226087:1
position: 226087
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:227978:1
position: 227978
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:226087-227978:1:exon

MARVELD3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8839
gene: MARVELD3
product: MARVEL domain containing 3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 57 samples with support for all annotated introns
transcript id: XM_038185650.1
SIO_010081: MARVELD3
subclass of: SO_0000673
so part of: MARVELD3
location: join(226087..226160,226252..226352,226492..227978)
location: region:226087-227978:1
so has part: feature:226087-226160:1:exon
so has part: feature:226252-226352:1:exon
so has part: feature:226492-227978:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:226087-226160:1:exon

position:226160:1
position: 226160
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:226252-226352:1:exon

position:226252:1
position: 226252
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:226352:1
position: 226352
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:226492-227978:1:exon

position:226492:1
position: 226492
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

MARVELD3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8839
gene: MARVELD3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: MARVEL domain-containing protein 3
translation: MAERSGARVPRAGGTGAGGRAVPGAGPQGPPGSRAAAPGPLECRRCRYLCTARACCQVVGALLAALLLVCGSVSYGSTGGYTGVASLGGIHYYQYGGAYSGFGGADGEKARQLDQRFHLLKLPIARAAMAVGGSLTVFSCLLILFGVLRVPWHFPAWLLLECTLDAVVGIGLVPALYYFFHHLLEVYNSSVCKEREQLYQSKGYQGFRCSLHGAEIAAGLLGCTAVMAYLLSAGLAVKGYRTVRKLKQKPVQVYEL
SIO_010081: MARVELD3
subclass of: SO_0000673
so part of: MARVELD3
location: join(226102..226160,226252..226352,226492..227102)
location: region:226102-227102:1
so has part: feature:226102-226160:1:exon
so has part: feature:226252-226352:1:exon
so has part: feature:226492-227102:1:exon

XP_038041578.1
type: Protein
SIO_000068: ncbiprotein

position:226102:1
position: 226102
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:227102:1
position: 227102
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:226102-226160:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:226252-226352:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:226492-227102:1:exon

PHLPP2
type: Gene
subclass of: SO_0000704
RO_0002162: 8839
gene: PHLPP2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(229585..264788)
location: region:229585-264788:-1
so has part: feature:229585-264788:-1:exon
subclass of: SO_0000010

101793975
type: Gene
SIO_000068: ncbigene

position:229585:-1
position: 229585
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:264788:-1
position: 264788
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:229585-264788:-1:exon

PHLPP2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8839
gene: PHLPP2
product: PH domain and leucine rich repeat protein phosphatase 2
exception: unclassified transcription discrepancy
note: The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: deleted 2 bases in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 98% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_038185433.1
SIO_010081: PHLPP2
subclass of: SO_0000673
so part of: PHLPP2
location: complement(join(229585..234348,235596..235827,235961..236149,236607..236717,237095..237225,237752..237914,239451..239651,240405..240560,241940..242035,242761..242821,243300..243502,244351..244581,246954..247100,248114..248268,249451..249576,249996..250186,252771..252904,261427..261671,262051..262726,264770..264788))
location: region:229585-264788:-1
so has part: feature:264770-264788:-1:exon
so has part: feature:262051-262726:-1:exon
so has part: feature:261427-261671:-1:exon
so has part: feature:252771-252904:-1:exon
so has part: feature:249996-250186:-1:exon
so has part: feature:249451-249576:-1:exon
so has part: feature:248114-248268:-1:exon
so has part: feature:246954-247100:-1:exon
so has part: feature:244351-244581:-1:exon
so has part: feature:243300-243502:-1:exon
so has part: feature:242761-242821:-1:exon
so has part: feature:241940-242035:-1:exon
so has part: feature:240405-240560:-1:exon
so has part: feature:239451-239651:-1:exon
so has part: feature:237752-237914:-1:exon
so has part: feature:237095-237225:-1:exon
so has part: feature:236607-236717:-1:exon
so has part: feature:235961-236149:-1:exon
so has part: feature:235596-235827:-1:exon
so has part: feature:229585-234348:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:264770-264788:-1:exon

position:264770:-1
position: 264770
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:262051-262726:-1:exon

position:262051:-1
position: 262051
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:262726:-1
position: 262726
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:261427-261671:-1:exon

position:261427:-1
position: 261427
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:261671:-1
position: 261671
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:252771-252904:-1:exon

position:252771:-1
position: 252771
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:252904:-1
position: 252904
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:249996-250186:-1:exon

position:249996:-1
position: 249996
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:250186:-1
position: 250186
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:249451-249576:-1:exon

position:249451:-1
position: 249451
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:249576:-1
position: 249576
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:248114-248268:-1:exon

position:248114:-1
position: 248114
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:248268:-1
position: 248268
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:246954-247100:-1:exon

position:246954:-1
position: 246954
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:247100:-1
position: 247100
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:244351-244581:-1:exon

position:244351:-1
position: 244351
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:244581:-1
position: 244581
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:243300-243502:-1:exon

position:243300:-1
position: 243300
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:243502:-1
position: 243502
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:242761-242821:-1:exon

position:242761:-1
position: 242761
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:242821:-1
position: 242821
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:241940-242035:-1:exon

position:241940:-1
position: 241940
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:242035:-1
position: 242035
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:240405-240560:-1:exon

position:240405:-1
position: 240405
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:240560:-1
position: 240560
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:239451-239651:-1:exon

position:239451:-1
position: 239451
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:239651:-1
position: 239651
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:237752-237914:-1:exon

position:237752:-1
position: 237752
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:237914:-1
position: 237914
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:237095-237225:-1:exon

position:237095:-1
position: 237095
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:237225:-1
position: 237225
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:236607-236717:-1:exon

position:236607:-1
position: 236607
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:236717:-1
position: 236717
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:235961-236149:-1:exon

position:235961:-1
position: 235961
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:236149:-1
position: 236149
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:235596-235827:-1:exon

position:235596:-1
position: 235596
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:235827:-1
position: 235827
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:229585-234348:-1:exon

position:234348:-1
position: 234348
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

PHLPP2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8839
gene: PHLPP2
exception: unclassified translation discrepancy
note: The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: deleted 2 bases in 1 codon; substituted 1 base at 1 genomic stop codon; Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
transl except: (pos:complement(262231..262233),aa:OTHER)
product: LOW QUALITY PROTEIN: PH domain leucine-rich repeat-containing protein phosphatase 2
translation: MVTCTERELSGSRRAPRPGSGGGRAAGGRDASRSSRRQRGLVNAPEGAASRGWAGGELEGSATRCSVPGASSGIAAGTGTAPSRCRGQQRAGARHRRRSPGGPRAAPRGAGPRAERLRGAAAAGGATRGAWPGPLRCGPAPPPRPRPPAAEGRALPGRGLRSGAGAAAAVXGLGVRRAMGEAGTGPGPREGPEPEPEEDEAAAAAAGGGGGGGGGARGGRAGPRGGIRVLKRNVKRNGSRSCLNRTRFGSRERDWLREDAGRGCVYVYGRDSASCASSDLRLVLCTVDTPASEICDGEERKNLFLQLHGDLVRRLEPTEKPLQIVYDYLAGLGFDDPVRMQEEAANSDLSCMIRFYSEKPSQVEQLDRILLSGIYNVRKGKTQLHKWAERLVILCGTCLIVSSVKDSHTGKMHILPLVGGKVEEMKRRQYTLAFTSAGAQAQTYHVSFETLAECQRWHRQASTVVSMRLSMVDLSCYSLEEVPEYLFYSQDIIYLNLRHNFMRSRGAGSLDSLCRFSQLKSLNLSHNRLGEFPLSLCEISTLTELNVSCNGLHCLPTQIGKLLNLQSFWLDGNFLTSLPEELGSLQQLSCLGLSFNNFRELPAIFEKLTFLDKLALAGNLLETLDLAVLNRMSHIKSVDLRLNNLKRAVDDTPEGNKSVTYMDLRDNRLTDLDLSSLGSLEQLHCERNKLKELTLSGFSLRALYANNNCLTSVNVYPVPGQLTCLELVHNQLQCVPDWACEAKKLEVLDMSYNLLVELPSRILSSLSLRKLMVGHNNLQSLPPLLEHIPLEVLDLQHNLLTELPEMLFVKALNLRYLNVSANNLESLPSACTGEESLSMLQLLYLTSNNLTDQCIPVLAGHTSLRILHLANNNLQAFPASKLSKLEHLEELNLSGNKLKTIPTTVANCKLLHTLIAHSNEISIFPEILHLPHIQIVDLSCNELTEILIPEALPATLQELDLTGNTNLVLEHKTLDIFSHITTLKIDAKPSLTTDSALTSTFWSHGIAEMAGQRNKLCVSTLAMGSFAEGVEAVYGMFDGDKNEELPRLLQCTMADVLLEEVQQSDTMFMSNTFLVSHRKLGMAGQKLGSSAVLCYIRHDMSDPASNFSLTVANVGTCQAILCRSGKPLLLSKVFSLEQCSEDAKRIKEQKAIITEDNKVNGVTCCTRMLGCTYLHPWILPKPHVSSIPLTVQDELLLLGNKALWEYLSYTEAVSAVRHLHDPLAAAKKLCTLAQSYGCQDNVGAMVVCLNISEDSCTCEMHGISLPGPGGFSSTTTKPATPSSSSGIASEFSSELSASEVSSEVGSTASDEHNAVGLDGSLLPRQERRCSLHPLPPLSIFQRQPSSATFSSNQSDNGLDSDDEQPVEGVMTNGSKVEVEVDIHCCKGKGLEFDPPALEYSSSAPGPEDDSGLVLLIQRQNSINSGTAQGAIKEKCELQKSPSTCCLYGKKLSNGSIVPLEESLNLIEVATEAPKKKTGYFAAPSQMEPEDQFVVPPDLEEEVKEQMKQHQENGADQERKEESAVALPDEFDTAL
SIO_010081: PHLPP2
subclass of: SO_0000673
so part of: PHLPP2
location: complement(join(233209..234348,235596..235827,235961..236149,236607..236717,237095..237225,237752..237914,239451..239651,240405..240560,241940..242035,242761..242821,243300..243502,244351..244581,246954..247100,248114..248268,249451..249576,249996..250186,252771..252904,261427..261671,262051..262726,264770..264788))
location: region:233209-264788:-1
so has part: feature:264770-264788:-1:exon
so has part: feature:262051-262726:-1:exon
so has part: feature:261427-261671:-1:exon
so has part: feature:252771-252904:-1:exon
so has part: feature:249996-250186:-1:exon
so has part: feature:249451-249576:-1:exon
so has part: feature:248114-248268:-1:exon
so has part: feature:246954-247100:-1:exon
so has part: feature:244351-244581:-1:exon
so has part: feature:243300-243502:-1:exon
so has part: feature:242761-242821:-1:exon
so has part: feature:241940-242035:-1:exon
so has part: feature:240405-240560:-1:exon
so has part: feature:239451-239651:-1:exon
so has part: feature:237752-237914:-1:exon
so has part: feature:237095-237225:-1:exon
so has part: feature:236607-236717:-1:exon
so has part: feature:235961-236149:-1:exon
so has part: feature:235596-235827:-1:exon
so has part: feature:233209-234348:-1:exon

XP_038041361.1
type: Protein
SIO_000068: ncbiprotein

position:233209:-1
position: 233209
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:264770-264788:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:262051-262726:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:261427-261671:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:252771-252904:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:249996-250186:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:249451-249576:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:248114-248268:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:246954-247100:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:244351-244581:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:243300-243502:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:242761-242821:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:241940-242035:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:240405-240560:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:239451-239651:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:237752-237914:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:237095-237225:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:236607-236717:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:235961-236149:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:235596-235827:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:233209-234348:-1:exon

AP1G1
type: Gene
subclass of: SO_0000704
RO_0002162: 8839
gene: AP1G1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(263278..308988)
location: region:263278-308988:-1
so has part: feature:263278-308988:-1:exon
subclass of: SO_0000010

101790053
type: Gene
SIO_000068: ncbigene

position:263278:-1
position: 263278
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:308988:-1
position: 308988
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:263278-308988:-1:exon

AP1G1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8839
gene: AP1G1
product: adaptor related protein complex 1 subunit gamma 1, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 125 samples with support for all annotated introns
transcript id: XM_027466676.2
SIO_010081: AP1G1
subclass of: SO_0000673
so part of: AP1G1
location: complement(join(263278..267231,269561..269659,270615..270775,271002..271097,271588..271714,272178..272319,274518..274622,275250..275377,275889..275978,276291..276413,278006..278060,278681..278821,282269..282382,283234..283289,283693..283791,284039..284119,284614..284709,287355..287363,288536..288612,289416..289512,290535..290676,293517..293641,298643..298846,308718..308988))
location: region:263278-308988:-1
so has part: feature:308718-308988:-1:exon
so has part: feature:298643-298846:-1:exon
so has part: feature:293517-293641:-1:exon
so has part: feature:290535-290676:-1:exon
so has part: feature:289416-289512:-1:exon
so has part: feature:288536-288612:-1:exon
so has part: feature:287355-287363:-1:exon
so has part: feature:284614-284709:-1:exon
so has part: feature:284039-284119:-1:exon
so has part: feature:283693-283791:-1:exon
so has part: feature:283234-283289:-1:exon
so has part: feature:282269-282382:-1:exon
so has part: feature:278681-278821:-1:exon
so has part: feature:278006-278060:-1:exon
so has part: feature:276291-276413:-1:exon
so has part: feature:275889-275978:-1:exon
so has part: feature:275250-275377:-1:exon
so has part: feature:274518-274622:-1:exon
so has part: feature:272178-272319:-1:exon
so has part: feature:271588-271714:-1:exon
so has part: feature:271002-271097:-1:exon
so has part: feature:270615-270775:-1:exon
so has part: feature:269561-269659:-1:exon
so has part: feature:263278-267231:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:308718-308988:-1:exon

position:308718:-1
position: 308718
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:298643-298846:-1:exon

position:298643:-1
position: 298643
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:298846:-1
position: 298846
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:293517-293641:-1:exon

position:293517:-1
position: 293517
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:293641:-1
position: 293641
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:290535-290676:-1:exon

position:290535:-1
position: 290535
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:290676:-1
position: 290676
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:289416-289512:-1:exon

position:289416:-1
position: 289416
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:289512:-1
position: 289512
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:288536-288612:-1:exon

position:288536:-1
position: 288536
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:288612:-1
position: 288612
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:287355-287363:-1:exon

position:287355:-1
position: 287355
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:287363:-1
position: 287363
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:284614-284709:-1:exon

position:284614:-1
position: 284614
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:284709:-1
position: 284709
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:284039-284119:-1:exon

position:284039:-1
position: 284039
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:284119:-1
position: 284119
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:283693-283791:-1:exon

position:283693:-1
position: 283693
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:283791:-1
position: 283791
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:283234-283289:-1:exon

position:283234:-1
position: 283234
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:283289:-1
position: 283289
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:282269-282382:-1:exon

position:282269:-1
position: 282269
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:282382:-1
position: 282382
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:278681-278821:-1:exon

position:278681:-1
position: 278681
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:278821:-1
position: 278821
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:278006-278060:-1:exon

position:278006:-1
position: 278006
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:278060:-1
position: 278060
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:276291-276413:-1:exon

position:276291:-1
position: 276291
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:276413:-1
position: 276413
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:275889-275978:-1:exon

position:275889:-1
position: 275889
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:275978:-1
position: 275978
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:275250-275377:-1:exon

position:275250:-1
position: 275250
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:275377:-1
position: 275377
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:274518-274622:-1:exon

position:274518:-1
position: 274518
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:274622:-1
position: 274622
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:272178-272319:-1:exon

position:272178:-1
position: 272178
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:272319:-1
position: 272319
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:271588-271714:-1:exon

position:271588:-1
position: 271588
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:271714:-1
position: 271714
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:271002-271097:-1:exon

position:271002:-1
position: 271002
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:271097:-1
position: 271097
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 22
SIO_000628: feature:270615-270775:-1:exon

position:270615:-1
position: 270615
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:270775:-1
position: 270775
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 23
SIO_000628: feature:269561-269659:-1:exon

position:269561:-1
position: 269561
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:269659:-1
position: 269659
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 24
SIO_000628: feature:263278-267231:-1:exon

position:267231:-1
position: 267231
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

AP1G1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8839
gene: AP1G1
product: adaptor related protein complex 1 subunit gamma 1, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 99 samples with support for all annotated introns
transcript id: XM_005028793.5
SIO_010081: AP1G1
subclass of: SO_0000673
so part of: AP1G1
location: complement(join(263278..267231,269561..269659,270615..270775,271002..271097,271588..271714,272178..272319,274518..274622,275250..275377,275889..275978,276291..276413,278006..278060,278681..278821,282269..282382,283234..283289,283693..283791,284039..284119,284614..284709,287355..287363,288536..288612,289416..289512,290535..290676,293517..293641,298643..298846,308168..308318))
location: region:263278-308318:-1
so has part: feature:308168-308318:-1:exon
so has part: feature:298643-298846:-1:exon
so has part: feature:293517-293641:-1:exon
so has part: feature:290535-290676:-1:exon
so has part: feature:289416-289512:-1:exon
so has part: feature:288536-288612:-1:exon
so has part: feature:287355-287363:-1:exon
so has part: feature:284614-284709:-1:exon
so has part: feature:284039-284119:-1:exon
so has part: feature:283693-283791:-1:exon
so has part: feature:283234-283289:-1:exon
so has part: feature:282269-282382:-1:exon
so has part: feature:278681-278821:-1:exon
so has part: feature:278006-278060:-1:exon
so has part: feature:276291-276413:-1:exon
so has part: feature:275889-275978:-1:exon
so has part: feature:275250-275377:-1:exon
so has part: feature:274518-274622:-1:exon
so has part: feature:272178-272319:-1:exon
so has part: feature:271588-271714:-1:exon
so has part: feature:271002-271097:-1:exon
so has part: feature:270615-270775:-1:exon
so has part: feature:269561-269659:-1:exon
so has part: feature:263278-267231:-1:exon

position:308318:-1
position: 308318
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:308168-308318:-1:exon

position:308168:-1
position: 308168
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:298643-298846:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:293517-293641:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:290535-290676:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:289416-289512:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:288536-288612:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:287355-287363:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:284614-284709:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:284039-284119:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:283693-283791:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:283234-283289:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:282269-282382:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:278681-278821:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:278006-278060:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:276291-276413:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:275889-275978:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:275250-275377:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:274518-274622:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:272178-272319:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:271588-271714:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:271002-271097:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:270615-270775:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:269561-269659:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:263278-267231:-1:exon

AP1G1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8839
gene: AP1G1
product: adaptor related protein complex 1 subunit gamma 1, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 124 samples with support for all annotated introns
transcript id: XM_038185651.1
SIO_010081: AP1G1
subclass of: SO_0000673
so part of: AP1G1
location: complement(join(263278..267231,269561..269659,270615..270775,271002..271097,271588..271714,272178..272319,274518..274622,275250..275377,275889..275978,276291..276413,278006..278060,278681..278821,282269..282382,283234..283289,283693..283791,284039..284119,284614..284709,288536..288612,289416..289512,290535..290676,293517..293641,298643..298846))
location: region:263278-298846:-1
so has part: feature:298643-298846:-1:exon
so has part: feature:293517-293641:-1:exon
so has part: feature:290535-290676:-1:exon
so has part: feature:289416-289512:-1:exon
so has part: feature:288536-288612:-1:exon
so has part: feature:284614-284709:-1:exon
so has part: feature:284039-284119:-1:exon
so has part: feature:283693-283791:-1:exon
so has part: feature:283234-283289:-1:exon
so has part: feature:282269-282382:-1:exon
so has part: feature:278681-278821:-1:exon
so has part: feature:278006-278060:-1:exon
so has part: feature:276291-276413:-1:exon
so has part: feature:275889-275978:-1:exon
so has part: feature:275250-275377:-1:exon
so has part: feature:274518-274622:-1:exon
so has part: feature:272178-272319:-1:exon
so has part: feature:271588-271714:-1:exon
so has part: feature:271002-271097:-1:exon
so has part: feature:270615-270775:-1:exon
so has part: feature:269561-269659:-1:exon
so has part: feature:263278-267231:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:298643-298846:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:293517-293641:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:290535-290676:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:289416-289512:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:288536-288612:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:284614-284709:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:284039-284119:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:283693-283791:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:283234-283289:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:282269-282382:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:278681-278821:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:278006-278060:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:276291-276413:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:275889-275978:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:275250-275377:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:274518-274622:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:272178-272319:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:271588-271714:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:271002-271097:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:270615-270775:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:269561-269659:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:263278-267231:-1:exon

AP1G1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8839
gene: AP1G1
product: adaptor related protein complex 1 subunit gamma 1, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 112 samples with support for all annotated introns
transcript id: XM_027466677.2
SIO_010081: AP1G1
subclass of: SO_0000673
so part of: AP1G1
location: complement(join(263278..267231,269561..269659,270615..270775,271002..271097,271588..271714,272178..272319,274518..274622,275250..275377,275889..275975,276291..276413,278006..278060,278681..278821,282269..282382,283234..283289,283693..283791,284039..284119,284614..284709,287355..287363,288536..288612,289416..289512,290535..290676,293517..293641,298643..298846))
location: region:263278-298846:-1
so has part: feature:298643-298846:-1:exon
so has part: feature:293517-293641:-1:exon
so has part: feature:290535-290676:-1:exon
so has part: feature:289416-289512:-1:exon
so has part: feature:288536-288612:-1:exon
so has part: feature:287355-287363:-1:exon
so has part: feature:284614-284709:-1:exon
so has part: feature:284039-284119:-1:exon
so has part: feature:283693-283791:-1:exon
so has part: feature:283234-283289:-1:exon
so has part: feature:282269-282382:-1:exon
so has part: feature:278681-278821:-1:exon
so has part: feature:278006-278060:-1:exon
so has part: feature:276291-276413:-1:exon
so has part: feature:275889-275975:-1:exon
so has part: feature:275250-275377:-1:exon
so has part: feature:274518-274622:-1:exon
so has part: feature:272178-272319:-1:exon
so has part: feature:271588-271714:-1:exon
so has part: feature:271002-271097:-1:exon
so has part: feature:270615-270775:-1:exon
so has part: feature:269561-269659:-1:exon
so has part: feature:263278-267231:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:298643-298846:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:293517-293641:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:290535-290676:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:289416-289512:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:288536-288612:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:287355-287363:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:284614-284709:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:284039-284119:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:283693-283791:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:283234-283289:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:282269-282382:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:278681-278821:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:278006-278060:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:276291-276413:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:275889-275975:-1:exon

position:275975:-1
position: 275975
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:275250-275377:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:274518-274622:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:272178-272319:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:271588-271714:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:271002-271097:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:270615-270775:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:269561-269659:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:263278-267231:-1:exon

AP1G1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8839
gene: AP1G1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: AP-1 complex subunit gamma-1 isoform X2
translation: MPAPIRLRELIRTIRTARTQAEEREMIQKECAAIRSSFREEDNTYRCRNVAKLLYMHMLGYPAHFGQLECLKLIASQKFTDKRIGYLGAMLLLDERQDVHLLMTNCIKNDLNHSTQYVQGLALCTLGCMGSSEMCRDLAGEVEKLLKTSNSYLRKKAALCAVHVIRKVPELMEMFLPATKNLLNEKNHGVLHTSVVLLTEMCERSPDMLAHFRKLVPQLVRILKNLIMSGYSPEHDVSGISDPFLQVRILRLLRILGRNDDDSSEAMNDILAQVATNTETSKNVGNAILYETVLTIMDIKSESGLRVLAINILGRFLLNNDKNIRYVALTSLLKTVQTDHNAVQRHRSTIVDCLKDLDVSIKRRAMELSFALVNGNNVRGMMKELLYFLDSCEPEFKADCASGIFLAAEKYAPSKRWHIDTIMRVLTTAGSYVRDDAVPNLIQLITNSVEMHAYTVQRLYKAILGDYSQQPLVQVASWCIGEYGDLLVSGQCEEEEPIQVTEDEVLDILESILISNMSASVTRGYALTAIMKLSTRFTCTVNRIKKVVSIYGSSIDVELQQRAVEYNALFKKYDHMRPALLERMPVMEKVTTNGPTEIVQTNGETEPAVLETKPPPSGLQPGSQANDLLDLLGGSDITPVIPTVPTSKPASAGGELLDLLGDLNLTGSPVPAPAPQISQPPFLLDGLPSQPLFNDIAAGIPSITAYNKNGLKIDFTFERSNTNPSVTVITIQASNSTELDMTDFVFQAAVPKTFQLQLLSPSSSVIPAFNSGTITQVIKVLNPQKQQLRMRIKLTYNHKGSAMQDLAEVNNFPPQSWQ
SIO_010081: AP1G1
subclass of: SO_0000673
so part of: AP1G1
location: complement(join(267130..267231,269561..269659,270615..270775,271002..271097,271588..271714,272178..272319,274518..274622,275250..275377,275889..275978,276291..276413,278006..278060,278681..278821,282269..282382,283234..283289,283693..283791,284039..284119,284614..284709,288536..288612,289416..289512,290535..290676,293517..293641,298643..298843))
location: region:267130-298843:-1
so has part: feature:298643-298843:-1:exon
so has part: feature:293517-293641:-1:exon
so has part: feature:290535-290676:-1:exon
so has part: feature:289416-289512:-1:exon
so has part: feature:288536-288612:-1:exon
so has part: feature:284614-284709:-1:exon
so has part: feature:284039-284119:-1:exon
so has part: feature:283693-283791:-1:exon
so has part: feature:283234-283289:-1:exon
so has part: feature:282269-282382:-1:exon
so has part: feature:278681-278821:-1:exon
so has part: feature:278006-278060:-1:exon
so has part: feature:276291-276413:-1:exon
so has part: feature:275889-275978:-1:exon
so has part: feature:275250-275377:-1:exon
so has part: feature:274518-274622:-1:exon
so has part: feature:272178-272319:-1:exon
so has part: feature:271588-271714:-1:exon
so has part: feature:271002-271097:-1:exon
so has part: feature:270615-270775:-1:exon
so has part: feature:269561-269659:-1:exon
so has part: feature:267130-267231:-1:exon

XP_038041579.1
type: Protein
SIO_000068: ncbiprotein

position:267130:-1
position: 267130
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:298843:-1
position: 298843
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:298643-298843:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:293517-293641:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:290535-290676:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:289416-289512:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:288536-288612:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:284614-284709:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:284039-284119:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:283693-283791:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:283234-283289:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:282269-282382:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:278681-278821:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:278006-278060:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:276291-276413:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:275889-275978:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:275250-275377:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:274518-274622:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:272178-272319:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:271588-271714:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:271002-271097:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:270615-270775:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:269561-269659:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:267130-267231:-1:exon

AP1G1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8839
gene: AP1G1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: AP-1 complex subunit gamma-1 isoform X1
translation: MPAPIRLRELIRTIRTARTQAEEREMIQKECAAIRSSFREEDNTYRCRNVAKLLYMHMLGYPAHFGQLECLKLIASQKFTDKRIGYLGAMLLLDERQDVHLLMTNCIKNDLNHSTQYVQGLALCTLGCMGSSEMCRDLAGEVEKLLKTSNSYLRKKAALCAVHVIRKVPELMEMFLPATKNLLNEKNHGVLHTSVVLLTEMCERSPDMLAHFRKNEKLVPQLVRILKNLIMSGYSPEHDVSGISDPFLQVRILRLLRILGRNDDDSSEAMNDILAQVATNTETSKNVGNAILYETVLTIMDIKSESGLRVLAINILGRFLLNNDKNIRYVALTSLLKTVQTDHNAVQRHRSTIVDCLKDLDVSIKRRAMELSFALVNGNNVRGMMKELLYFLDSCEPEFKADCASGIFLAAEKYAPSKRWHIDTIMRVLTTAGSYVRDDAVPNLIQLITNSVEMHAYTVQRLYKAILGDYSQPLVQVASWCIGEYGDLLVSGQCEEEEPIQVTEDEVLDILESILISNMSASVTRGYALTAIMKLSTRFTCTVNRIKKVVSIYGSSIDVELQQRAVEYNALFKKYDHMRPALLERMPVMEKVTTNGPTEIVQTNGETEPAVLETKPPPSGLQPGSQANDLLDLLGGSDITPVIPTVPTSKPASAGGELLDLLGDLNLTGSPVPAPAPQISQPPFLLDGLPSQPLFNDIAAGIPSITAYNKNGLKIDFTFERSNTNPSVTVITIQASNSTELDMTDFVFQAAVPKTFQLQLLSPSSSVIPAFNSGTITQVIKVLNPQKQQLRMRIKLTYNHKGSAMQDLAEVNNFPPQSWQ
SIO_010081: AP1G1
subclass of: SO_0000673
so part of: AP1G1
location: complement(join(267130..267231,269561..269659,270615..270775,271002..271097,271588..271714,272178..272319,274518..274622,275250..275377,275889..275975,276291..276413,278006..278060,278681..278821,282269..282382,283234..283289,283693..283791,284039..284119,284614..284709,287355..287363,288536..288612,289416..289512,290535..290676,293517..293641,298643..298843))
location: region:267130-298843:-1
so has part: feature:298643-298843:-1:exon
so has part: feature:293517-293641:-1:exon
so has part: feature:290535-290676:-1:exon
so has part: feature:289416-289512:-1:exon
so has part: feature:288536-288612:-1:exon
so has part: feature:287355-287363:-1:exon
so has part: feature:284614-284709:-1:exon
so has part: feature:284039-284119:-1:exon
so has part: feature:283693-283791:-1:exon
so has part: feature:283234-283289:-1:exon
so has part: feature:282269-282382:-1:exon
so has part: feature:278681-278821:-1:exon
so has part: feature:278006-278060:-1:exon
so has part: feature:276291-276413:-1:exon
so has part: feature:275889-275975:-1:exon
so has part: feature:275250-275377:-1:exon
so has part: feature:274518-274622:-1:exon
so has part: feature:272178-272319:-1:exon
so has part: feature:271588-271714:-1:exon
so has part: feature:271002-271097:-1:exon
so has part: feature:270615-270775:-1:exon
so has part: feature:269561-269659:-1:exon
so has part: feature:267130-267231:-1:exon

XP_027322478.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:298643-298843:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:293517-293641:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:290535-290676:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:289416-289512:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:288536-288612:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:287355-287363:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:284614-284709:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:284039-284119:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:283693-283791:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:283234-283289:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:282269-282382:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:278681-278821:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:278006-278060:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:276291-276413:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:275889-275975:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:275250-275377:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:274518-274622:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:272178-272319:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:271588-271714:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:271002-271097:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:270615-270775:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:269561-269659:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:267130-267231:-1:exon

AP1G1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8839
gene: AP1G1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: AP-1 complex subunit gamma-1 isoform X3
translation: MPAPIRLRELIRTIRTARTQAEEREMIQKECAAIRSSFREEDNTYRCRNVAKLLYMHMLGYPAHFGQLECLKLIASQKFTDKRIGYLGAMLLLDERQDVHLLMTNCIKNDLNHSTQYVQGLALCTLGCMGSSEMCRDLAGEVEKLLKTSNSYLRKKAALCAVHVIRKVPELMEMFLPATKNLLNEKNHGVLHTSVVLLTEMCERSPDMLAHFRKNEKLVPQLVRILKNLIMSGYSPEHDVSGISDPFLQVRILRLLRILGRNDDDSSEAMNDILAQVATNTETSKNVGNAILYETVLTIMDIKSESGLRVLAINILGRFLLNNDKNIRYVALTSLLKTVQTDHNAVQRHRSTIVDCLKDLDVSIKRRAMELSFALVNGNNVRGMMKELLYFLDSCEPEFKADCASGIFLAAEKYAPSKRWHIDTIMRVLTTAGSYVRDDAVPNLIQLITNSVEMHAYTVQRLYKAILGDYSQQPLVQVASWCIGEYGDLLVSGQCEEEEPIQVTEDEVLDILESILISNMSASVTRGYALTAIMKLSTRFTCTVNRIKKVVSIYGSSIDVELQQRAVEYNALFKKYDHMRPALLERMPVMEKVTTNGPTEIVQTNGETEPAVLETKPPPSGLQPGSQANDLLDLLGGSDITPVIPTVPTSKPASAGGELLDLLGDLNLTGSPVPAPAPQISQPPFLLDGLPSQPLFNDIAAGIPSITAYNKNGLKIDFTFERSNTNPSVTVITIQASNSTELDMTDFVFQAAVPKTFQLQLLSPSSSVIPAFNSGTITQVIKVLNPQKQQLRMRIKLTYNHKGSAMQDLAEVNNFPPQSWQ
SIO_010081: AP1G1
subclass of: SO_0000673
so part of: AP1G1
location: complement(join(267130..267231,269561..269659,270615..270775,271002..271097,271588..271714,272178..272319,274518..274622,275250..275377,275889..275978,276291..276413,278006..278060,278681..278821,282269..282382,283234..283289,283693..283791,284039..284119,284614..284709,287355..287363,288536..288612,289416..289512,290535..290676,293517..293641,298643..298843))
location: region:267130-298843:-1
so has part: feature:298643-298843:-1:exon
so has part: feature:293517-293641:-1:exon
so has part: feature:290535-290676:-1:exon
so has part: feature:289416-289512:-1:exon
so has part: feature:288536-288612:-1:exon
so has part: feature:287355-287363:-1:exon
so has part: feature:284614-284709:-1:exon
so has part: feature:284039-284119:-1:exon
so has part: feature:283693-283791:-1:exon
so has part: feature:283234-283289:-1:exon
so has part: feature:282269-282382:-1:exon
so has part: feature:278681-278821:-1:exon
so has part: feature:278006-278060:-1:exon
so has part: feature:276291-276413:-1:exon
so has part: feature:275889-275978:-1:exon
so has part: feature:275250-275377:-1:exon
so has part: feature:274518-274622:-1:exon
so has part: feature:272178-272319:-1:exon
so has part: feature:271588-271714:-1:exon
so has part: feature:271002-271097:-1:exon
so has part: feature:270615-270775:-1:exon
so has part: feature:269561-269659:-1:exon
so has part: feature:267130-267231:-1:exon

XP_027322477.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:298643-298843:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:293517-293641:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:290535-290676:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:289416-289512:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:288536-288612:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:287355-287363:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:284614-284709:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:284039-284119:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:283693-283791:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:283234-283289:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:282269-282382:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:278681-278821:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:278006-278060:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:276291-276413:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:275889-275978:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:275250-275377:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:274518-274622:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:272178-272319:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:271588-271714:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:271002-271097:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:270615-270775:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:269561-269659:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:267130-267231:-1:exon

AP1G1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8839
gene: AP1G1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: AP-1 complex subunit gamma-1 isoform X3
translation: MPAPIRLRELIRTIRTARTQAEEREMIQKECAAIRSSFREEDNTYRCRNVAKLLYMHMLGYPAHFGQLECLKLIASQKFTDKRIGYLGAMLLLDERQDVHLLMTNCIKNDLNHSTQYVQGLALCTLGCMGSSEMCRDLAGEVEKLLKTSNSYLRKKAALCAVHVIRKVPELMEMFLPATKNLLNEKNHGVLHTSVVLLTEMCERSPDMLAHFRKNEKLVPQLVRILKNLIMSGYSPEHDVSGISDPFLQVRILRLLRILGRNDDDSSEAMNDILAQVATNTETSKNVGNAILYETVLTIMDIKSESGLRVLAINILGRFLLNNDKNIRYVALTSLLKTVQTDHNAVQRHRSTIVDCLKDLDVSIKRRAMELSFALVNGNNVRGMMKELLYFLDSCEPEFKADCASGIFLAAEKYAPSKRWHIDTIMRVLTTAGSYVRDDAVPNLIQLITNSVEMHAYTVQRLYKAILGDYSQQPLVQVASWCIGEYGDLLVSGQCEEEEPIQVTEDEVLDILESILISNMSASVTRGYALTAIMKLSTRFTCTVNRIKKVVSIYGSSIDVELQQRAVEYNALFKKYDHMRPALLERMPVMEKVTTNGPTEIVQTNGETEPAVLETKPPPSGLQPGSQANDLLDLLGGSDITPVIPTVPTSKPASAGGELLDLLGDLNLTGSPVPAPAPQISQPPFLLDGLPSQPLFNDIAAGIPSITAYNKNGLKIDFTFERSNTNPSVTVITIQASNSTELDMTDFVFQAAVPKTFQLQLLSPSSSVIPAFNSGTITQVIKVLNPQKQQLRMRIKLTYNHKGSAMQDLAEVNNFPPQSWQ
SIO_010081: AP1G1
subclass of: SO_0000673
so part of: AP1G1
location: complement(join(267130..267231,269561..269659,270615..270775,271002..271097,271588..271714,272178..272319,274518..274622,275250..275377,275889..275978,276291..276413,278006..278060,278681..278821,282269..282382,283234..283289,283693..283791,284039..284119,284614..284709,287355..287363,288536..288612,289416..289512,290535..290676,293517..293641,298643..298843))
location: region:267130-298843:-1
so has part: feature:298643-298843:-1:exon
so has part: feature:293517-293641:-1:exon
so has part: feature:290535-290676:-1:exon
so has part: feature:289416-289512:-1:exon
so has part: feature:288536-288612:-1:exon
so has part: feature:287355-287363:-1:exon
so has part: feature:284614-284709:-1:exon
so has part: feature:284039-284119:-1:exon
so has part: feature:283693-283791:-1:exon
so has part: feature:283234-283289:-1:exon
so has part: feature:282269-282382:-1:exon
so has part: feature:278681-278821:-1:exon
so has part: feature:278006-278060:-1:exon
so has part: feature:276291-276413:-1:exon
so has part: feature:275889-275978:-1:exon
so has part: feature:275250-275377:-1:exon
so has part: feature:274518-274622:-1:exon
so has part: feature:272178-272319:-1:exon
so has part: feature:271588-271714:-1:exon
so has part: feature:271002-271097:-1:exon
so has part: feature:270615-270775:-1:exon
so has part: feature:269561-269659:-1:exon
so has part: feature:267130-267231:-1:exon

XP_005028850.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:298643-298843:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:293517-293641:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:290535-290676:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:289416-289512:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:288536-288612:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:287355-287363:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:284614-284709:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:284039-284119:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:283693-283791:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:283234-283289:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:282269-282382:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:278681-278821:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:278006-278060:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:276291-276413:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:275889-275978:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:275250-275377:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:274518-274622:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:272178-272319:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:271588-271714:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:271002-271097:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:270615-270775:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:269561-269659:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:267130-267231:-1:exon

LOC113844920
type: Gene
subclass of: SO_0000704
RO_0002162: 8839
gene: LOC113844920
note: Derived by automated computational analysis using gene prediction method: cmsearch.
so part of: sequence
location: complement(280831..280917)
location: region:280831-280917:-1
so has part: feature:280831-280917:-1:exon
subclass of: SO_0000578

113844920
type: Gene
SIO_000068: ncbigene

position:280831:-1
position: 280831
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:280917:-1
position: 280917
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:280831-280917:-1:exon

LOC113844920
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 8839
nc RNA class: snoRNA
gene: LOC113844920
product: small nucleolar RNA SNORD71
inference: COORDINATES: nucleotide motif:Rfam:12.0:RF00576
inference: COORDINATES: profile:INFERNAL:1.1.1
note: Derived by automated computational analysis using gene prediction method: cmsearch.
transcript id: XR_003499949.1
SIO_010081: LOC113844920
subclass of: SO_0000673
so part of: LOC113844920
location: complement(280831..280917)
location: region:280831-280917:-1
so has part: feature:280831-280917:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:280831-280917:-1:exon

ATXN1L
type: Gene
subclass of: SO_0000704
RO_0002162: 8839
gene: ATXN1L
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 309571..325271
location: region:309571-325271:1
so has part: feature:309571-325271:1:exon
subclass of: SO_0000010

101794164
type: Gene
SIO_000068: ncbigene

position:309571:1
position: 309571
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:325271:1
position: 325271
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:309571-325271:1:exon

ATXN1L
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8839
gene: ATXN1L
product: ataxin 1 like, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 6 samples with support for all annotated introns
transcript id: XM_038185652.1
SIO_010081: ATXN1L
subclass of: SO_0000673
so part of: ATXN1L
location: join(309571..309688,309920..311520,321310..321419,323142..325271)
location: region:309571-325271:1
so has part: feature:309571-309688:1:exon
so has part: feature:309920-311520:1:exon
so has part: feature:321310-321419:1:exon
so has part: feature:323142-325271:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:309571-309688:1:exon

position:309688:1
position: 309688
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:309920-311520:1:exon

position:309920:1
position: 309920
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:311520:1
position: 311520
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:321310-321419:1:exon

position:321310:1
position: 321310
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:321419:1
position: 321419
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:323142-325271:1:exon

position:323142:1
position: 323142
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

ATXN1L
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8839
gene: ATXN1L
product: ataxin 1 like, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 81 samples with support for all annotated introns
transcript id: XM_027466679.2
SIO_010081: ATXN1L
subclass of: SO_0000673
so part of: ATXN1L
location: join(309571..309688,309920..316646)
location: region:309571-316646:1
so has part: feature:309571-309688:1:exon
so has part: feature:309920-316646:1:exon

position:316646:1
position: 316646
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:309571-309688:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:309920-316646:1:exon

ATXN1L
type: Miscellaneous RNA
subclass of: SO_0000673
RO_0002162: 8839
gene: ATXN1L
product: ataxin 1 like, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 80 samples with support for all annotated introns
transcript id: XR_003499933.2
SIO_010081: ATXN1L
so part of: ATXN1L
location: join(309571..309688,309920..315673,315898..316646)
location: region:309571-316646:1
so has part: feature:309571-309688:1:exon
so has part: feature:309920-315673:1:exon
so has part: feature:315898-316646:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:309571-309688:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:309920-315673:1:exon

position:315673:1
position: 315673
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:315898-316646:1:exon

position:315898:1
position: 315898
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

ATXN1L
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8839
gene: ATXN1L
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: ataxin-1-like isoform X2
translation: MRAGHERSQERLPPKKRELPAASSGAEAARAGGAQASGEGPEWARTAGPGPAALRYGPGEAAEAVAGLTVDQYGMLYKVAVPPATFSPTALHPVVNVSPLTPAFNVTSPIIQHPGVPYPPIHYAQIPPTSLQLIGSHYTVPYAVPPGFLPSPLLSPSTNLAASHVPHFVPYASLFTEEAAPSPPTTSPTHTFNKSASAVSPSGQMQHHAGTQPLDTTLGRIPVYYQMSRLPPGYSAYETPTAGGSPDSSQQDSQLSSEVAAANGGQRHLEHNVVRRTSEAVDSGSSKAEDCLPGAAVGCVVDGQFLSGYQTLRTEVSVPAHRNTPDTDLEVQRVVGVLASQDYHVLAAQRKDDPSPLNLCHSISDQQGESKDILRNTVERAAAGKSQSRSPYVVSPEEMVRQRQLTKGMVIANGKPVLVPVGSEPIRSSASETLVRQSPDVQARGSVLEKDLAQLQPPSSSHLPSHFMKGAIIQLATGELKRVEDLQTQDFVRSAEPGDTVWRKREWGQGKKSPRGEKMCFHPAPSLLPGNLRYLERANRWGERRGKDH
SIO_010081: ATXN1L
subclass of: SO_0000673
so part of: ATXN1L
location: join(310033..311520,321310..321419,323142..323193)
location: region:310033-323193:1
so has part: feature:310033-311520:1:exon
so has part: feature:321310-321419:1:exon
so has part: feature:323142-323193:1:exon

XP_038041580.1
type: Protein
SIO_000068: ncbiprotein

position:310033:1
position: 310033
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:323193:1
position: 323193
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:310033-311520:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:321310-321419:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:323142-323193:1:exon

ATXN1L
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8839
gene: ATXN1L
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: ataxin-1-like isoform X1
translation: MRAGHERSQERLPPKKRELPAASSGAEAARAGGAQASGEGPEWARTAGPGPAALRYGPGEAAEAVAGLTVDQYGMLYKVAVPPATFSPTALHPVVNVSPLTPAFNVTSPIIQHPGVPYPPIHYAQIPPTSLQLIGSHYTVPYAVPPGFLPSPLLSPSTNLAASHVPHFVPYASLFTEEAAPSPPTTSPTHTFNKSASAVSPSGQMQHHAGTQPLDTTLGRIPVYYQMSRLPPGYSAYETPTAGGSPDSSQQDSQLSSEVAAANGGQRHLEHNVVRRTSEAVDSGSSKAEDCLPGAAVGCVVDGQFLSGYQTLRTEVSVPAHRNTPDTDLEVQRVVGVLASQDYHVLAAQRKDDPSPLNLCHSISDQQGESKDILRNTVERAAAGKSQSRSPYVVSPEEMVRQRQLTKGMVIANGKPVLVPVGSEPIRSSASETLVRQSPDVQARGSVLEKDLAQLQPPSSSHLPSHFMKGAIIQLATGELKRVEDLQTQDFVRSAEVSGGLKIDSSTVVDIQESQWPGLVMLHFVVGEQQSKVSIDVPPEHPFFVYGQGWSSCSPGRTAQLFALPCHRLQVGDVCISISLQSMNGNSASQANYPLTDQLISTRERSERTAQGSREPSDRAAERKSQPERESAAQSSHAEPSQPETVTQHSWAAPGFQRYSTQAEEPRPSLLRPSFIPQEVKLSIEGRSNAGK
SIO_010081: ATXN1L
subclass of: SO_0000673
so part of: ATXN1L
location: 310033..312111
location: region:310033-312111:1
so has part: feature:310033-312111:1:exon

XP_027322480.2
type: Protein
SIO_000068: ncbiprotein

position:312111:1
position: 312111
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:310033-312111:1:exon

ZNF821
type: Gene
subclass of: SO_0000704
RO_0002162: 8839
gene: ZNF821
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(318051..331317)
location: region:318051-331317:-1
so has part: feature:318051-331317:-1:exon
subclass of: SO_0000010

101790760
type: Gene
SIO_000068: ncbigene

position:318051:-1
position: 318051
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:331317:-1
position: 331317
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:318051-331317:-1:exon

ZNF821
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8839
gene: ZNF821
product: zinc finger protein 821, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 7 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 112 samples with support for all annotated introns
transcript id: XM_027466685.2
SIO_010081: ZNF821
subclass of: SO_0000673
so part of: ZNF821
location: complement(join(318051..318966,319674..319840,320766..320870,321447..321589,322085..322210,329722..329813,330928..331317))
location: region:318051-331317:-1
so has part: feature:330928-331317:-1:exon
so has part: feature:329722-329813:-1:exon
so has part: feature:322085-322210:-1:exon
so has part: feature:321447-321589:-1:exon
so has part: feature:320766-320870:-1:exon
so has part: feature:319674-319840:-1:exon
so has part: feature:318051-318966:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:330928-331317:-1:exon

position:330928:-1
position: 330928
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:329722-329813:-1:exon

position:329722:-1
position: 329722
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:329813:-1
position: 329813
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:322085-322210:-1:exon

position:322085:-1
position: 322085
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:322210:-1
position: 322210
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:321447-321589:-1:exon

position:321447:-1
position: 321447
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:321589:-1
position: 321589
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:320766-320870:-1:exon

position:320766:-1
position: 320766
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:320870:-1
position: 320870
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:319674-319840:-1:exon

position:319674:-1
position: 319674
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:319840:-1
position: 319840
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:318051-318966:-1:exon

position:318966:-1
position: 318966
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

ZNF821
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8839
gene: ZNF821
product: zinc finger protein 821, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 7 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 55 samples with support for all annotated introns
transcript id: XM_027466686.2
SIO_010081: ZNF821
subclass of: SO_0000673
so part of: ZNF821
location: complement(join(318051..318966,319674..319840,320766..320870,321447..321589,322085..322210,329722..329813,330745..330763))
location: region:318051-330763:-1
so has part: feature:330745-330763:-1:exon
so has part: feature:329722-329813:-1:exon
so has part: feature:322085-322210:-1:exon
so has part: feature:321447-321589:-1:exon
so has part: feature:320766-320870:-1:exon
so has part: feature:319674-319840:-1:exon
so has part: feature:318051-318966:-1:exon

position:330763:-1
position: 330763
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:330745-330763:-1:exon

position:330745:-1
position: 330745
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:329722-329813:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:322085-322210:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:321447-321589:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:320766-320870:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:319674-319840:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:318051-318966:-1:exon

ZNF821
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8839
gene: ZNF821
product: zinc finger protein 821, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 113 samples with support for all annotated introns
transcript id: XM_027466688.2
SIO_010081: ZNF821
subclass of: SO_0000673
so part of: ZNF821
location: complement(join(318051..318966,319674..319840,320766..320870,321447..321589,322055..322191))
location: region:318051-322191:-1
so has part: feature:322055-322191:-1:exon
so has part: feature:321447-321589:-1:exon
so has part: feature:320766-320870:-1:exon
so has part: feature:319674-319840:-1:exon
so has part: feature:318051-318966:-1:exon

position:322191:-1
position: 322191
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:322055-322191:-1:exon

position:322055:-1
position: 322055
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:321447-321589:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:320766-320870:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:319674-319840:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:318051-318966:-1:exon

ZNF821
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8839
gene: ZNF821
product: zinc finger protein 821, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 61 samples with support for all annotated introns
transcript id: XM_005028806.5
SIO_010081: ZNF821
subclass of: SO_0000673
so part of: ZNF821
location: complement(join(318051..318966,319674..319840,320766..320870,321447..321589,322021..322039))
location: region:318051-322039:-1
so has part: feature:322021-322039:-1:exon
so has part: feature:321447-321589:-1:exon
so has part: feature:320766-320870:-1:exon
so has part: feature:319674-319840:-1:exon
so has part: feature:318051-318966:-1:exon

position:322039:-1
position: 322039
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:322021-322039:-1:exon

position:322021:-1
position: 322021
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:321447-321589:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:320766-320870:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:319674-319840:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:318051-318966:-1:exon

ZNF821
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8839
gene: ZNF821
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: zinc finger protein 821 isoform X1
translation: MSRRKQTTPNKVHWEQVFAGLEEQARQAMMKNSFPGPLGDQRPAIHPLQDHDSSSSGSDDDETTQDEVSSHTSEEDGSMIKVKKELENVEKPAAGTPLMRENEVTESLNADPMLGLSQCPLCQLECGSREQLIAHVYQHTAAVVSAKSYMCPVCGRALSSPGSLGRHLLIHSEDQLSNCAVCGARFTSHATFNSEKLPEVLSADRLPAPQSEGPSSVEGKDVAFHTPVYPASILLVCNNCAAYRKLLEAQTPGMRKWALRRQNEPLEVRLQRLERERTAKKSRRDNETPEEREVRRMRDREAKRLQRMQETDEQRARRLQRDREAMRLKRANETPEKRQARLIREREAKRLKRRLEKMDMMLRAQFGQDPSAMAALAAEMNFFQLPVSNVELESQLLGKMTFEEQSNSTLH
SIO_010081: ZNF821
subclass of: SO_0000673
so part of: ZNF821
location: complement(join(318312..318966,319674..319840,320766..320870,321447..321589,322085..322210,329722..329761))
location: region:318312-329761:-1
so has part: feature:329722-329761:-1:exon
so has part: feature:322085-322210:-1:exon
so has part: feature:321447-321589:-1:exon
so has part: feature:320766-320870:-1:exon
so has part: feature:319674-319840:-1:exon
so has part: feature:318312-318966:-1:exon

XP_027322486.1
type: Protein
SIO_000068: ncbiprotein

position:318312:-1
position: 318312
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:329761:-1
position: 329761
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:329722-329761:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:322085-322210:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:321447-321589:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:320766-320870:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:319674-319840:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:318312-318966:-1:exon

ZNF821
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8839
gene: ZNF821
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: zinc finger protein 821 isoform X1
translation: MSRRKQTTPNKVHWEQVFAGLEEQARQAMMKNSFPGPLGDQRPAIHPLQDHDSSSSGSDDDETTQDEVSSHTSEEDGSMIKVKKELENVEKPAAGTPLMRENEVTESLNADPMLGLSQCPLCQLECGSREQLIAHVYQHTAAVVSAKSYMCPVCGRALSSPGSLGRHLLIHSEDQLSNCAVCGARFTSHATFNSEKLPEVLSADRLPAPQSEGPSSVEGKDVAFHTPVYPASILLVCNNCAAYRKLLEAQTPGMRKWALRRQNEPLEVRLQRLERERTAKKSRRDNETPEEREVRRMRDREAKRLQRMQETDEQRARRLQRDREAMRLKRANETPEKRQARLIREREAKRLKRRLEKMDMMLRAQFGQDPSAMAALAAEMNFFQLPVSNVELESQLLGKMTFEEQSNSTLH
SIO_010081: ZNF821
subclass of: SO_0000673
so part of: ZNF821
location: complement(join(318312..318966,319674..319840,320766..320870,321447..321589,322085..322210,329722..329761))
location: region:318312-329761:-1
so has part: feature:329722-329761:-1:exon
so has part: feature:322085-322210:-1:exon
so has part: feature:321447-321589:-1:exon
so has part: feature:320766-320870:-1:exon
so has part: feature:319674-319840:-1:exon
so has part: feature:318312-318966:-1:exon

XP_027322487.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:329722-329761:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:322085-322210:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:321447-321589:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:320766-320870:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:319674-319840:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:318312-318966:-1:exon

ZNF821
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8839
gene: ZNF821
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: zinc finger protein 821 isoform X2
translation: MIKVKKELENVEKPAAGTPLMRENEVTESLNADPMLGLSQCPLCQLECGSREQLIAHVYQHTAAVVSAKSYMCPVCGRALSSPGSLGRHLLIHSEDQLSNCAVCGARFTSHATFNSEKLPEVLSADRLPAPQSEGPSSVEGKDVAFHTPVYPASILLVCNNCAAYRKLLEAQTPGMRKWALRRQNEPLEVRLQRLERERTAKKSRRDNETPEEREVRRMRDREAKRLQRMQETDEQRARRLQRDREAMRLKRANETPEKRQARLIREREAKRLKRRLEKMDMMLRAQFGQDPSAMAALAAEMNFFQLPVSNVELESQLLGKMTFEEQSNSTLH
SIO_010081: ZNF821
subclass of: SO_0000673
so part of: ZNF821
location: complement(join(318312..318966,319674..319840,320766..320870,321447..321521))
location: region:318312-321521:-1
so has part: feature:321447-321521:-1:exon
so has part: feature:320766-320870:-1:exon
so has part: feature:319674-319840:-1:exon
so has part: feature:318312-318966:-1:exon

XP_027322489.1
type: Protein
SIO_000068: ncbiprotein

position:321521:-1
position: 321521
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:321447-321521:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:320766-320870:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:319674-319840:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:318312-318966:-1:exon

ZNF821
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8839
gene: ZNF821
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: zinc finger protein 821 isoform X2
translation: MIKVKKELENVEKPAAGTPLMRENEVTESLNADPMLGLSQCPLCQLECGSREQLIAHVYQHTAAVVSAKSYMCPVCGRALSSPGSLGRHLLIHSEDQLSNCAVCGARFTSHATFNSEKLPEVLSADRLPAPQSEGPSSVEGKDVAFHTPVYPASILLVCNNCAAYRKLLEAQTPGMRKWALRRQNEPLEVRLQRLERERTAKKSRRDNETPEEREVRRMRDREAKRLQRMQETDEQRARRLQRDREAMRLKRANETPEKRQARLIREREAKRLKRRLEKMDMMLRAQFGQDPSAMAALAAEMNFFQLPVSNVELESQLLGKMTFEEQSNSTLH
SIO_010081: ZNF821
subclass of: SO_0000673
so part of: ZNF821
location: complement(join(318312..318966,319674..319840,320766..320870,321447..321521))
location: region:318312-321521:-1
so has part: feature:321447-321521:-1:exon
so has part: feature:320766-320870:-1:exon
so has part: feature:319674-319840:-1:exon
so has part: feature:318312-318966:-1:exon

XP_005028863.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:321447-321521:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:320766-320870:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:319674-319840:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:318312-318966:-1:exon

ZNF821
type: Miscellaneous RNA
subclass of: SO_0000673
RO_0002162: 8839
gene: ZNF821
product: zinc finger protein 821, transcript variant X5
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 126 samples with support for all annotated introns
transcript id: XR_005268956.1
SIO_010081: ZNF821
so part of: ZNF821
location: complement(join(325594..326219,327487..327680,329722..329813,330928..331295))
location: region:325594-331295:-1
so has part: feature:330928-331295:-1:exon
so has part: feature:329722-329813:-1:exon
so has part: feature:327487-327680:-1:exon
so has part: feature:325594-326219:-1:exon

position:325594:-1
position: 325594
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:331295:-1
position: 331295
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:330928-331295:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:329722-329813:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:327487-327680:-1:exon

position:327487:-1
position: 327487
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:327680:-1
position: 327680
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:325594-326219:-1:exon

position:326219:-1
position: 326219
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

IST1
type: Gene
subclass of: SO_0000704
RO_0002162: 8839
gene: IST1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 331536..340439
location: region:331536-340439:1
so has part: feature:331536-340439:1:exon
subclass of: SO_0000010

101792210
type: Gene
SIO_000068: ncbigene

position:331536:1
position: 331536
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:340439:1
position: 340439
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:331536-340439:1:exon

IST1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8839
gene: IST1
product: IST1 factor associated with ESCRT-III, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 7 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 126 samples with support for all annotated introns
transcript id: XM_027466690.2
SIO_010081: IST1
subclass of: SO_0000673
so part of: IST1
location: join(331536..331786,333747..333846,334485..334665,334903..334990,335312..335395,335810..335920,336284..336490,337574..337666,338819..338867,339898..340439)
location: region:331536-340439:1
so has part: feature:331536-331786:1:exon
so has part: feature:333747-333846:1:exon
so has part: feature:334485-334665:1:exon
so has part: feature:334903-334990:1:exon
so has part: feature:335312-335395:1:exon
so has part: feature:335810-335920:1:exon
so has part: feature:336284-336490:1:exon
so has part: feature:337574-337666:1:exon
so has part: feature:338819-338867:1:exon
so has part: feature:339898-340439:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:331536-331786:1:exon

position:331786:1
position: 331786
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:333747-333846:1:exon

position:333747:1
position: 333747
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:333846:1
position: 333846
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:334485-334665:1:exon

position:334485:1
position: 334485
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:334665:1
position: 334665
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:334903-334990:1:exon

position:334903:1
position: 334903
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:334990:1
position: 334990
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:335312-335395:1:exon

position:335312:1
position: 335312
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:335395:1
position: 335395
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:335810-335920:1:exon

position:335810:1
position: 335810
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:335920:1
position: 335920
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:336284-336490:1:exon

position:336284:1
position: 336284
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:336490:1
position: 336490
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:337574-337666:1:exon

position:337574:1
position: 337574
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:337666:1
position: 337666
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:338819-338867:1:exon

position:338819:1
position: 338819
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:338867:1
position: 338867
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:339898-340439:1:exon

position:339898:1
position: 339898
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

IST1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8839
gene: IST1
product: IST1 factor associated with ESCRT-III, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 7 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 124 samples with support for all annotated introns
transcript id: XM_027466692.2
SIO_010081: IST1
subclass of: SO_0000673
so part of: IST1
location: join(331536..331757,333747..333846,334485..334665,334903..334990,335312..335395,335810..335920,336284..336490,337574..337666,338819..338867,339898..340439)
location: region:331536-340439:1
so has part: feature:331536-331757:1:exon
so has part: feature:333747-333846:1:exon
so has part: feature:334485-334665:1:exon
so has part: feature:334903-334990:1:exon
so has part: feature:335312-335395:1:exon
so has part: feature:335810-335920:1:exon
so has part: feature:336284-336490:1:exon
so has part: feature:337574-337666:1:exon
so has part: feature:338819-338867:1:exon
so has part: feature:339898-340439:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:331536-331757:1:exon

position:331757:1
position: 331757
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:333747-333846:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:334485-334665:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:334903-334990:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:335312-335395:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:335810-335920:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:336284-336490:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:337574-337666:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:338819-338867:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:339898-340439:1:exon

IST1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8839
gene: IST1
product: IST1 factor associated with ESCRT-III, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 7 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 106 samples with support for all annotated introns
transcript id: XM_027466693.2
SIO_010081: IST1
subclass of: SO_0000673
so part of: IST1
location: join(331536..331723,333747..333846,334485..334665,334903..334990,335312..335395,335810..335920,336284..336490,337574..337666,338819..338867,339898..340439)
location: region:331536-340439:1
so has part: feature:331536-331723:1:exon
so has part: feature:333747-333846:1:exon
so has part: feature:334485-334665:1:exon
so has part: feature:334903-334990:1:exon
so has part: feature:335312-335395:1:exon
so has part: feature:335810-335920:1:exon
so has part: feature:336284-336490:1:exon
so has part: feature:337574-337666:1:exon
so has part: feature:338819-338867:1:exon
so has part: feature:339898-340439:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:331536-331723:1:exon

position:331723:1
position: 331723
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:333747-333846:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:334485-334665:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:334903-334990:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:335312-335395:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:335810-335920:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:336284-336490:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:337574-337666:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:338819-338867:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:339898-340439:1:exon

IST1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8839
gene: IST1
product: IST1 factor associated with ESCRT-III, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 111 samples with support for all annotated introns
transcript id: XM_013107978.4
SIO_010081: IST1
subclass of: SO_0000673
so part of: IST1
location: join(333747..333862,334485..334665,334903..334990,335312..335395,335810..335920,336284..336490,337574..337666,338819..338867,339898..340439)
location: region:333747-340439:1
so has part: feature:333747-333862:1:exon
so has part: feature:334485-334665:1:exon
so has part: feature:334903-334990:1:exon
so has part: feature:335312-335395:1:exon
so has part: feature:335810-335920:1:exon
so has part: feature:336284-336490:1:exon
so has part: feature:337574-337666:1:exon
so has part: feature:338819-338867:1:exon
so has part: feature:339898-340439:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:333747-333862:1:exon

position:333862:1
position: 333862
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:334485-334665:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:334903-334990:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:335312-335395:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:335810-335920:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:336284-336490:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:337574-337666:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:338819-338867:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:339898-340439:1:exon

IST1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8839
gene: IST1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: IST1 homolog isoform X1
translation: MLGSGFKAERLRVNLRLVINRLKLLEKKKTELAQKARKEIADYLAAGKDERARIRVEHIIREDYLVEAMEILELYCDLLLARFGLIQSMKELDSGLAEAVSTLIWAAPRLQSEVAELKIVADQLCAKYSKEYGKLCRTNQIGTVNDRLMHKLSVEAPPKILVERYLIEIAKNYNVPYEPDSVVMAEAPTGVEADLIDVGFTDDVKKGGHGGGGGGGFTAPLVGLDGLVPVPVPMPMPMPSPNPPFSYPPPKGPDNFSGLPVGTYQPFTNIHPPPIPANPPTYESIDEPNADKDASSAPVAGPGPKSEPSPKPRAGPPNTIDNFVLPELPSVPDTLPTASAGTNSSASEDIDFDDLSRRFEELKKKT
SIO_010081: IST1
subclass of: SO_0000673
so part of: IST1
location: join(333759..333846,334485..334665,334903..334990,335312..335395,335810..335920,336284..336490,337574..337666,338819..338867,339898..340097)
location: region:333759-340097:1
so has part: feature:333759-333846:1:exon
so has part: feature:334485-334665:1:exon
so has part: feature:334903-334990:1:exon
so has part: feature:335312-335395:1:exon
so has part: feature:335810-335920:1:exon
so has part: feature:336284-336490:1:exon
so has part: feature:337574-337666:1:exon
so has part: feature:338819-338867:1:exon
so has part: feature:339898-340097:1:exon

XP_027322491.1
type: Protein
SIO_000068: ncbiprotein

position:333759:1
position: 333759
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:340097:1
position: 340097
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:333759-333846:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:334485-334665:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:334903-334990:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:335312-335395:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:335810-335920:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:336284-336490:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:337574-337666:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:338819-338867:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:339898-340097:1:exon

IST1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8839
gene: IST1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: IST1 homolog isoform X1
translation: MLGSGFKAERLRVNLRLVINRLKLLEKKKTELAQKARKEIADYLAAGKDERARIRVEHIIREDYLVEAMEILELYCDLLLARFGLIQSMKELDSGLAEAVSTLIWAAPRLQSEVAELKIVADQLCAKYSKEYGKLCRTNQIGTVNDRLMHKLSVEAPPKILVERYLIEIAKNYNVPYEPDSVVMAEAPTGVEADLIDVGFTDDVKKGGHGGGGGGGFTAPLVGLDGLVPVPVPMPMPMPSPNPPFSYPPPKGPDNFSGLPVGTYQPFTNIHPPPIPANPPTYESIDEPNADKDASSAPVAGPGPKSEPSPKPRAGPPNTIDNFVLPELPSVPDTLPTASAGTNSSASEDIDFDDLSRRFEELKKKT
SIO_010081: IST1
subclass of: SO_0000673
so part of: IST1
location: join(333759..333846,334485..334665,334903..334990,335312..335395,335810..335920,336284..336490,337574..337666,338819..338867,339898..340097)
location: region:333759-340097:1
so has part: feature:333759-333846:1:exon
so has part: feature:334485-334665:1:exon
so has part: feature:334903-334990:1:exon
so has part: feature:335312-335395:1:exon
so has part: feature:335810-335920:1:exon
so has part: feature:336284-336490:1:exon
so has part: feature:337574-337666:1:exon
so has part: feature:338819-338867:1:exon
so has part: feature:339898-340097:1:exon

XP_027322493.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:333759-333846:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:334485-334665:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:334903-334990:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:335312-335395:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:335810-335920:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:336284-336490:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:337574-337666:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:338819-338867:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:339898-340097:1:exon

IST1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8839
gene: IST1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: IST1 homolog isoform X1
translation: MLGSGFKAERLRVNLRLVINRLKLLEKKKTELAQKARKEIADYLAAGKDERARIRVEHIIREDYLVEAMEILELYCDLLLARFGLIQSMKELDSGLAEAVSTLIWAAPRLQSEVAELKIVADQLCAKYSKEYGKLCRTNQIGTVNDRLMHKLSVEAPPKILVERYLIEIAKNYNVPYEPDSVVMAEAPTGVEADLIDVGFTDDVKKGGHGGGGGGGFTAPLVGLDGLVPVPVPMPMPMPSPNPPFSYPPPKGPDNFSGLPVGTYQPFTNIHPPPIPANPPTYESIDEPNADKDASSAPVAGPGPKSEPSPKPRAGPPNTIDNFVLPELPSVPDTLPTASAGTNSSASEDIDFDDLSRRFEELKKKT
SIO_010081: IST1
subclass of: SO_0000673
so part of: IST1
location: join(333759..333846,334485..334665,334903..334990,335312..335395,335810..335920,336284..336490,337574..337666,338819..338867,339898..340097)
location: region:333759-340097:1
so has part: feature:333759-333846:1:exon
so has part: feature:334485-334665:1:exon
so has part: feature:334903-334990:1:exon
so has part: feature:335312-335395:1:exon
so has part: feature:335810-335920:1:exon
so has part: feature:336284-336490:1:exon
so has part: feature:337574-337666:1:exon
so has part: feature:338819-338867:1:exon
so has part: feature:339898-340097:1:exon

XP_027322494.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:333759-333846:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:334485-334665:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:334903-334990:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:335312-335395:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:335810-335920:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:336284-336490:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:337574-337666:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:338819-338867:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:339898-340097:1:exon

IST1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8839
gene: IST1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: IST1 homolog isoform X2
translation: MEILELYCDLLLARFGLIQSMKELDSGLAEAVSTLIWAAPRLQSEVAELKIVADQLCAKYSKEYGKLCRTNQIGTVNDRLMHKLSVEAPPKILVERYLIEIAKNYNVPYEPDSVVMAEAPTGVEADLIDVGFTDDVKKGGHGGGGGGGFTAPLVGLDGLVPVPVPMPMPMPSPNPPFSYPPPKGPDNFSGLPVGTYQPFTNIHPPPIPANPPTYESIDEPNADKDASSAPVAGPGPKSEPSPKPRAGPPNTIDNFVLPELPSVPDTLPTASAGTNSSASEDIDFDDLSRRFEELKKKT
SIO_010081: IST1
subclass of: SO_0000673
so part of: IST1
location: join(334601..334665,334903..334990,335312..335395,335810..335920,336284..336490,337574..337666,338819..338867,339898..340097)
location: region:334601-340097:1
so has part: feature:334601-334665:1:exon
so has part: feature:334903-334990:1:exon
so has part: feature:335312-335395:1:exon
so has part: feature:335810-335920:1:exon
so has part: feature:336284-336490:1:exon
so has part: feature:337574-337666:1:exon
so has part: feature:338819-338867:1:exon
so has part: feature:339898-340097:1:exon

XP_012963432.2
type: Protein
SIO_000068: ncbiprotein

position:334601:1
position: 334601
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:334601-334665:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:334903-334990:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:335312-335395:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:335810-335920:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:336284-336490:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:337574-337666:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:338819-338867:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:339898-340097:1:exon

DHODH
type: Gene
subclass of: SO_0000704
RO_0002162: 8839
gene: DHODH
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 340802..344300
location: region:340802-344300:1
so has part: feature:340802-344300:1:exon
subclass of: SO_0000010

101794333
type: Gene
SIO_000068: ncbigene

position:340802:1
position: 340802
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:344300:1
position: 344300
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:340802-344300:1:exon

DHODH
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8839
gene: DHODH
product: dihydroorotate dehydrogenase (quinone)
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 43 samples with support for all annotated introns
transcript id: XM_027466689.2
SIO_010081: DHODH
subclass of: SO_0000673
so part of: DHODH
location: join(340802..340844,340951..341151,341303..341502,341694..341776,342300..342487,342893..343006,343344..343497,343569..343728,343837..344300)
location: region:340802-344300:1
so has part: feature:340802-340844:1:exon
so has part: feature:340951-341151:1:exon
so has part: feature:341303-341502:1:exon
so has part: feature:341694-341776:1:exon
so has part: feature:342300-342487:1:exon
so has part: feature:342893-343006:1:exon
so has part: feature:343344-343497:1:exon
so has part: feature:343569-343728:1:exon
so has part: feature:343837-344300:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:340802-340844:1:exon

position:340844:1
position: 340844
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:340951-341151:1:exon

position:340951:1
position: 340951
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:341151:1
position: 341151
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:341303-341502:1:exon

position:341303:1
position: 341303
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:341502:1
position: 341502
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:341694-341776:1:exon

position:341694:1
position: 341694
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:341776:1
position: 341776
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:342300-342487:1:exon

position:342300:1
position: 342300
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:342487:1
position: 342487
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:342893-343006:1:exon

position:342893:1
position: 342893
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:343006:1
position: 343006
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:343344-343497:1:exon

position:343344:1
position: 343344
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:343497:1
position: 343497
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:343569-343728:1:exon

position:343569:1
position: 343569
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:343728:1
position: 343728
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:343837-344300:1:exon

position:343837:1
position: 343837
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

DHODH
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8839
gene: DHODH
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: dihydroorotate dehydrogenase (quinone), mitochondrial
translation: MAAPLRRRLRALAAALGGCGLLLGSALAAGDERLQAAALPALRCLPPETAHGLALRAAACGLLPAARPDGPALEVRVLGRRFRNPLGLAAGFDKHGEAVDGLYKVGFGFVEVGTVTPEPQEGNPKPRVFRLLEDEAVINRYGFNSHGHAAVERRLRARQETQRKLTGAGMPLGVNLGKNKSSTDAAADYVAGVRVLGPLADYLVVNVSSPNTPGLRDLQGKAELRDLLTKVLAERDTLPCKHKPAVLVKIAPDLTLQDKQDIASVVCELGVDGLIVTNTTVSRPQGLQSMQRLEPGGLSGKPLRELSTQTVREMYALTQGQVPIIGVGGVSSGRDALEKIRAGASLVQLYTALVYQGPLVVGAVKRELEELLREQGFKSVMEAVGADHRR
SIO_010081: DHODH
subclass of: SO_0000673
so part of: DHODH
location: join(340827..340844,340951..341151,341303..341502,341694..341776,342300..342487,342893..343006,343344..343497,343569..343728,343837..343891)
location: region:340827-343891:1
so has part: feature:340827-340844:1:exon
so has part: feature:340951-341151:1:exon
so has part: feature:341303-341502:1:exon
so has part: feature:341694-341776:1:exon
so has part: feature:342300-342487:1:exon
so has part: feature:342893-343006:1:exon
so has part: feature:343344-343497:1:exon
so has part: feature:343569-343728:1:exon
so has part: feature:343837-343891:1:exon

XP_027322490.1
type: Protein
SIO_000068: ncbiprotein

position:340827:1
position: 340827
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:343891:1
position: 343891
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:340827-340844:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:340951-341151:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:341303-341502:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:341694-341776:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:342300-342487:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:342893-343006:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:343344-343497:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:343569-343728:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:343837-343891:1:exon

DHX38
type: Gene
subclass of: SO_0000704
RO_0002162: 8839
gene: DHX38
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 344741..354821
location: region:344741-354821:1
so has part: feature:344741-354821:1:exon
subclass of: SO_0000010

101792737
type: Gene
SIO_000068: ncbigene

position:344741:1
position: 344741
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:354821:1
position: 354821
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:344741-354821:1:exon

DHX38
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8839
gene: DHX38
product: DEAH-box helicase 38
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 16 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 126 samples with support for all annotated introns
transcript id: XM_027466675.2
SIO_010081: DHX38
subclass of: SO_0000673
so part of: DHX38
location: join(344741..345235,345714..345901,346060..346164,346583..346748,346867..346985,347132..347208,347406..347561,348086..348247,348333..348440,349364..349476,349578..349715,349977..350163,350253..350438,350898..351038,351212..351322,351402..351518,351758..351865,351984..352096,352464..352672,352759..352913,352991..353146,353222..353356,353436..353561,353950..354045,354277..354398,354561..354821)
location: region:344741-354821:1
so has part: feature:344741-345235:1:exon
so has part: feature:345714-345901:1:exon
so has part: feature:346060-346164:1:exon
so has part: feature:346583-346748:1:exon
so has part: feature:346867-346985:1:exon
so has part: feature:347132-347208:1:exon
so has part: feature:347406-347561:1:exon
so has part: feature:348086-348247:1:exon
so has part: feature:348333-348440:1:exon
so has part: feature:349364-349476:1:exon
so has part: feature:349578-349715:1:exon
so has part: feature:349977-350163:1:exon
so has part: feature:350253-350438:1:exon
so has part: feature:350898-351038:1:exon
so has part: feature:351212-351322:1:exon
so has part: feature:351402-351518:1:exon
so has part: feature:351758-351865:1:exon
so has part: feature:351984-352096:1:exon
so has part: feature:352464-352672:1:exon
so has part: feature:352759-352913:1:exon
so has part: feature:352991-353146:1:exon
so has part: feature:353222-353356:1:exon
so has part: feature:353436-353561:1:exon
so has part: feature:353950-354045:1:exon
so has part: feature:354277-354398:1:exon
so has part: feature:354561-354821:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:344741-345235:1:exon

position:345235:1
position: 345235
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:345714-345901:1:exon

position:345714:1
position: 345714
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:345901:1
position: 345901
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:346060-346164:1:exon

position:346060:1
position: 346060
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:346164:1
position: 346164
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:346583-346748:1:exon

position:346583:1
position: 346583
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:346748:1
position: 346748
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:346867-346985:1:exon

position:346867:1
position: 346867
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:346985:1
position: 346985
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:347132-347208:1:exon

position:347132:1
position: 347132
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:347208:1
position: 347208
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:347406-347561:1:exon

position:347406:1
position: 347406
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:347561:1
position: 347561
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:348086-348247:1:exon

position:348086:1
position: 348086
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:348247:1
position: 348247
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:348333-348440:1:exon

position:348333:1
position: 348333
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:348440:1
position: 348440
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:349364-349476:1:exon

position:349364:1
position: 349364
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:349476:1
position: 349476
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:349578-349715:1:exon

position:349578:1
position: 349578
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:349715:1
position: 349715
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:349977-350163:1:exon

position:349977:1
position: 349977
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:350163:1
position: 350163
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:350253-350438:1:exon

position:350253:1
position: 350253
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:350438:1
position: 350438
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:350898-351038:1:exon

position:350898:1
position: 350898
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:351038:1
position: 351038
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:351212-351322:1:exon

position:351212:1
position: 351212
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:351322:1
position: 351322
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:351402-351518:1:exon

position:351402:1
position: 351402
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:351518:1
position: 351518
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:351758-351865:1:exon

position:351758:1
position: 351758
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:351865:1
position: 351865
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:351984-352096:1:exon

position:351984:1
position: 351984
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:352096:1
position: 352096
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:352464-352672:1:exon

position:352464:1
position: 352464
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:352672:1
position: 352672
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:352759-352913:1:exon

position:352759:1
position: 352759
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:352913:1
position: 352913
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:352991-353146:1:exon

position:352991:1
position: 352991
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:353146:1
position: 353146
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 22
SIO_000628: feature:353222-353356:1:exon

position:353222:1
position: 353222
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:353356:1
position: 353356
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 23
SIO_000628: feature:353436-353561:1:exon

position:353436:1
position: 353436
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:353561:1
position: 353561
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 24
SIO_000628: feature:353950-354045:1:exon

position:353950:1
position: 353950
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:354045:1
position: 354045
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 25
SIO_000628: feature:354277-354398:1:exon

position:354277:1
position: 354277
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:354398:1
position: 354398
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 26
SIO_000628: feature:354561-354821:1:exon

position:354561:1
position: 354561
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

DHX38
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8839
gene: DHX38
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: pre-mRNA-splicing factor ATP-dependent RNA helicase PRP16
translation: MAEAEAGERSLHRLAGTGPEAGPGGLVLRGRSAAAEQHVFKAPAPRASLLGLDVLAAQKRREREEEAAAGGKRSRVCSYRDWEDGRDEAGSPEEDEEEEEGGRSARSGRKDRHYRSVHVETPSYTGGVSEEFWERSRQRERDRREHGVFASSKEEKERKKERSRDRNHDRKRDREERDRSHHSSRSERDGSSERSSRRSEPESPRHRPKDAATPSRSSWEEDDSGYSSSRRSQWESPSPTPSYRDSERSHRASSLRDTDRRDRDRSVRSRCSDKTPLPTPSYKYNEWADDRRHLGATPRLSRGRGRREDGEEGIAFETEEERQQWEDDQRQADRDWYMMDEGYDEFHNPLAYSSEEYVKKREQHLHKQKQKRISAQRRQINEDNERWETNRMLTSGVVHRIEVDEDFEEDNSAKVHLLVHNLVPPFLDGRIVFTKQPEPVIPVKDATSDLAIIARKGSQLVRKHREQKERKRAQHKHWELAGTKLGDIMGIKKEEEKDEMVTEDGKVDYKTEQKFAEHMKEKSEARSEFAKKKSILEQRQYLPIFAVQQELLSILRDNSIVIVVGETGSGKTTQLTQYLHEDGYTDYGMIGCTQPRRVAAMSVAKRVSEEMGVRLGEEVGYAIRFEDCTSENTIIKYMTDGILLRESLREADLDNYSAIIMDEAHERSLNTDVLFGLLREVVARRSDLKLVVTSATMDADKFASFFGNVPIFHIPGRTFPVDILFSKTPQEDYVEAAVKQALQVHLSGAPGDILVFMPGQEDIEVTSEQIVEHLEELEKAPALAVLPIYSQLPSDLQAKIFQKAPDGVRKCIVATNIAETSLTVDGIMFVIDSGYCKLKVFNPRIGMDALQIYPISQANANQRAGRAGRTGPGHCFRLYTQSAYKNELLTTTVPEIQRTNLANVVLLLKSLGVQDLLQFHFMDPPPEDNMLNSMYQLWILGALDNTGGLTSTGRLMVEFPLDPALSKMLIVSCDMGCSSEILLIVSMLSVPAIFYRPKGREEESDQVREKFAVPESDHLTYLNVYLQWKNNNYSTLWCNQHFIHAKAMRKVREVRAQLKDIMVQQRMSLASCGTDWDVVRKCICAAYFHQAAKLKGIGEYVNIRTGMPCHLHPTSSLFGMGYTPDYIVYHELVMTTKEYMQCVTAVDGEWLAELGPMFYSIKHAGKSRQENRRRAKEEVSAMEEEMALAEEQLRARREEQERRNPLGSARSTKIYTPGRKEQGEPLTPRRTPARFGL
SIO_010081: DHX38
subclass of: SO_0000673
so part of: DHX38
location: join(344901..345235,345714..345901,346060..346164,346583..346748,346867..346985,347132..347208,347406..347561,348086..348247,348333..348440,349364..349476,349578..349715,349977..350163,350253..350438,350898..351038,351212..351322,351402..351518,351758..351865,351984..352096,352464..352672,352759..352913,352991..353146,353222..353356,353436..353561,353950..354045,354277..354398,354561..354645)
location: region:344901-354645:1
so has part: feature:344901-345235:1:exon
so has part: feature:345714-345901:1:exon
so has part: feature:346060-346164:1:exon
so has part: feature:346583-346748:1:exon
so has part: feature:346867-346985:1:exon
so has part: feature:347132-347208:1:exon
so has part: feature:347406-347561:1:exon
so has part: feature:348086-348247:1:exon
so has part: feature:348333-348440:1:exon
so has part: feature:349364-349476:1:exon
so has part: feature:349578-349715:1:exon
so has part: feature:349977-350163:1:exon
so has part: feature:350253-350438:1:exon
so has part: feature:350898-351038:1:exon
so has part: feature:351212-351322:1:exon
so has part: feature:351402-351518:1:exon
so has part: feature:351758-351865:1:exon
so has part: feature:351984-352096:1:exon
so has part: feature:352464-352672:1:exon
so has part: feature:352759-352913:1:exon
so has part: feature:352991-353146:1:exon
so has part: feature:353222-353356:1:exon
so has part: feature:353436-353561:1:exon
so has part: feature:353950-354045:1:exon
so has part: feature:354277-354398:1:exon
so has part: feature:354561-354645:1:exon

XP_027322476.2
type: Protein
SIO_000068: ncbiprotein

position:344901:1
position: 344901
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:354645:1
position: 354645
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:344901-345235:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:345714-345901:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:346060-346164:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:346583-346748:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:346867-346985:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:347132-347208:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:347406-347561:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:348086-348247:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:348333-348440:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:349364-349476:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:349578-349715:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:349977-350163:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:350253-350438:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:350898-351038:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:351212-351322:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:351402-351518:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:351758-351865:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:351984-352096:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:352464-352672:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:352759-352913:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:352991-353146:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:353222-353356:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:353436-353561:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:353950-354045:1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:354277-354398:1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:354561-354645:1:exon

PMFBP1
type: Gene
subclass of: SO_0000704
RO_0002162: 8839
gene: PMFBP1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(354802..359828)
location: region:354802-359828:-1
so has part: feature:354802-359828:-1:exon
subclass of: SO_0000010

101792541
type: Gene
SIO_000068: ncbigene

position:354802:-1
position: 354802
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:359828:-1
position: 359828
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:354802-359828:-1:exon

PMFBP1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8839
gene: PMFBP1
product: polyamine modulated factor 1 binding protein 1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 68% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_027466683.2
SIO_010081: PMFBP1
subclass of: SO_0000673
so part of: PMFBP1
location: complement(join(354802..354940,355141..355234,355349..355423,355508..355617,355926..356264,356343..356498,356662..356850,358335..358442,359038..359286,359766..359828))
location: region:354802-359828:-1
so has part: feature:359766-359828:-1:exon
so has part: feature:359038-359286:-1:exon
so has part: feature:358335-358442:-1:exon
so has part: feature:356662-356850:-1:exon
so has part: feature:356343-356498:-1:exon
so has part: feature:355926-356264:-1:exon
so has part: feature:355508-355617:-1:exon
so has part: feature:355349-355423:-1:exon
so has part: feature:355141-355234:-1:exon
so has part: feature:354802-354940:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:359766-359828:-1:exon

position:359766:-1
position: 359766
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:359038-359286:-1:exon

position:359038:-1
position: 359038
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:359286:-1
position: 359286
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:358335-358442:-1:exon

position:358335:-1
position: 358335
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:358442:-1
position: 358442
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:356662-356850:-1:exon

position:356662:-1
position: 356662
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:356850:-1
position: 356850
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:356343-356498:-1:exon

position:356343:-1
position: 356343
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:356498:-1
position: 356498
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:355926-356264:-1:exon

position:355926:-1
position: 355926
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:356264:-1
position: 356264
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:355508-355617:-1:exon

position:355508:-1
position: 355508
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:355617:-1
position: 355617
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:355349-355423:-1:exon

position:355349:-1
position: 355349
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:355423:-1
position: 355423
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:355141-355234:-1:exon

position:355141:-1
position: 355141
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:355234:-1
position: 355234
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:354802-354940:-1:exon

position:354940:-1
position: 354940
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

PMFBP1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8839
gene: PMFBP1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: polyamine-modulated factor 1-binding protein 1
translation: MAELSSSTRQRQQEMERCQAQGQRQAEVPEPRQGEPQACQDTEQQELEPAHVLASLQALQLDLDFCRGRNCKRLVQLQQQECVVEQKHQDLVFLMQHYQEVIGKGQKDEAVQTEVTYAGSHDNADTSRGLPKGHAELLEQLRVQEDQSQGLQRSLAQLQEELGATRAREQQGLQQLSGAKETIQDLQQEVASSRKHEAELLRQVQDVATLQAELAQAQQKKAKQEEKIAAYKEQMQQLHLELRKLQEAQEQSKQQAHSLQQRLQELSSQAQHWQQLHQDSQQALALREEELVVYKVEMAFLKEELSKAMEQLQDRTAQHHSSRTAGVQAEPLTPENRPWPTGTAEVERTCQGMAHCRAQANAGGSCGSVVTLRTSHTLGWSNSSRPHQERELLLVNISQRAKEQMQSSEKRGQKTQQQINHAAELTGNKEHLQDTLGSLQVENKYLRVRTHEQHHKGEQMKGSNLTTGATHNSAGLPLPRTQLQDEK
SIO_010081: PMFBP1
subclass of: SO_0000673
so part of: PMFBP1
location: complement(join(354860..354940,355141..355234,355349..355423,355508..355617,355926..356264,356343..356498,356662..356850,358335..358442,359038..359286,359766..359828))
location: region:354860-359828:-1
so has part: feature:359766-359828:-1:exon
so has part: feature:359038-359286:-1:exon
so has part: feature:358335-358442:-1:exon
so has part: feature:356662-356850:-1:exon
so has part: feature:356343-356498:-1:exon
so has part: feature:355926-356264:-1:exon
so has part: feature:355508-355617:-1:exon
so has part: feature:355349-355423:-1:exon
so has part: feature:355141-355234:-1:exon
so has part: feature:354860-354940:-1:exon

XP_027322484.2
type: Protein
SIO_000068: ncbiprotein

position:354860:-1
position: 354860
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:359766-359828:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:359038-359286:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:358335-358442:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:356662-356850:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:356343-356498:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:355926-356264:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:355508-355617:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:355349-355423:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:355141-355234:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:354860-354940:-1:exon

ZFHX3
type: Gene
subclass of: SO_0000704
RO_0002162: 8839
gene: ZFHX3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(488436..654394)
location: region:488436-654394:-1
so has part: feature:488436-654394:-1:exon
subclass of: SO_0000010

101794515
type: Gene
SIO_000068: ncbigene

position:488436:-1
position: 488436
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:654394:-1
position: 654394
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:488436-654394:-1:exon

ZFHX3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8839
gene: ZFHX3
product: zinc finger homeobox 3, transcript variant X5
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 120 samples with support for all annotated introns
transcript id: XM_038185564.1
SIO_010081: ZFHX3
subclass of: SO_0000673
so part of: ZFHX3
location: complement(join(488436..493927,498365..503845,505178..505280,514334..514534,514736..514869,526950..527057,565731..565962,594503..594999,598506..601215))
location: region:488436-601215:-1
so has part: feature:598506-601215:-1:exon
so has part: feature:594503-594999:-1:exon
so has part: feature:565731-565962:-1:exon
so has part: feature:526950-527057:-1:exon
so has part: feature:514736-514869:-1:exon
so has part: feature:514334-514534:-1:exon
so has part: feature:505178-505280:-1:exon
so has part: feature:498365-503845:-1:exon
so has part: feature:488436-493927:-1:exon

position:601215:-1
position: 601215
reference: sequence
type: ReverseStrandPosition
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urn:…
SIO_000300: 1
SIO_000628: feature:598506-601215:-1:exon

position:598506:-1
position: 598506
reference: sequence
type: ReverseStrandPosition
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urn:…
SIO_000300: 2
SIO_000628: feature:594503-594999:-1:exon

position:594503:-1
position: 594503
reference: sequence
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position:594999:-1
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reference: sequence
type: ReverseStrandPosition
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urn:…
SIO_000300: 3
SIO_000628: feature:565731-565962:-1:exon

position:565731:-1
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reference: sequence
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position:565962:-1
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reference: sequence
type: ReverseStrandPosition
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urn:…
SIO_000300: 4
SIO_000628: feature:526950-527057:-1:exon

position:526950:-1
position: 526950
reference: sequence
type: ReverseStrandPosition
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position:527057:-1
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reference: sequence
type: ReverseStrandPosition
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urn:…
SIO_000300: 5
SIO_000628: feature:514736-514869:-1:exon

position:514736:-1
position: 514736
reference: sequence
type: ReverseStrandPosition
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position:514869:-1
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reference: sequence
type: ReverseStrandPosition
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urn:…
SIO_000300: 6
SIO_000628: feature:514334-514534:-1:exon

position:514334:-1
position: 514334
reference: sequence
type: ReverseStrandPosition
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position:514534:-1
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reference: sequence
type: ReverseStrandPosition
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urn:…
SIO_000300: 7
SIO_000628: feature:505178-505280:-1:exon

position:505178:-1
position: 505178
reference: sequence
type: ReverseStrandPosition
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position:505280:-1
position: 505280
reference: sequence
type: ReverseStrandPosition
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urn:…
SIO_000300: 8
SIO_000628: feature:498365-503845:-1:exon

position:498365:-1
position: 498365
reference: sequence
type: ReverseStrandPosition
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position:503845:-1
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reference: sequence
type: ReverseStrandPosition
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urn:…
SIO_000300: 9
SIO_000628: feature:488436-493927:-1:exon

position:493927:-1
position: 493927
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

ZFHX3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8839
gene: ZFHX3
product: zinc finger homeobox 3, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 74 samples with support for all annotated introns
transcript id: XM_038185561.1
SIO_010081: ZFHX3
subclass of: SO_0000673
so part of: ZFHX3
location: complement(join(492330..493927,498365..503845,505178..505280,514334..514534,514736..514869,526950..527057,565731..565962,594503..594999,598506..601261,654267..654394))
location: region:492330-654394:-1
so has part: feature:654267-654394:-1:exon
so has part: feature:598506-601261:-1:exon
so has part: feature:594503-594999:-1:exon
so has part: feature:565731-565962:-1:exon
so has part: feature:526950-527057:-1:exon
so has part: feature:514736-514869:-1:exon
so has part: feature:514334-514534:-1:exon
so has part: feature:505178-505280:-1:exon
so has part: feature:498365-503845:-1:exon
so has part: feature:492330-493927:-1:exon

position:492330:-1
position: 492330
reference: sequence
type: ReverseStrandPosition
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urn:…
SIO_000300: 1
SIO_000628: feature:654267-654394:-1:exon

position:654267:-1
position: 654267
reference: sequence
type: ReverseStrandPosition
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urn:…
SIO_000300: 2
SIO_000628: feature:598506-601261:-1:exon

position:601261:-1
position: 601261
reference: sequence
type: ReverseStrandPosition
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urn:…
SIO_000300: 3
SIO_000628: feature:594503-594999:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:565731-565962:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:526950-527057:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:514736-514869:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:514334-514534:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:505178-505280:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:498365-503845:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:492330-493927:-1:exon

ZFHX3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8839
gene: ZFHX3
product: zinc finger homeobox 3, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 65 samples with support for all annotated introns
transcript id: XM_027466394.2
SIO_010081: ZFHX3
subclass of: SO_0000673
so part of: ZFHX3
location: complement(join(492330..493927,498365..503845,505178..505280,514334..514534,514736..514869,526950..527057,565731..565962,594503..594999,598506..601261,653581..653755))
location: region:492330-653755:-1
so has part: feature:653581-653755:-1:exon
so has part: feature:598506-601261:-1:exon
so has part: feature:594503-594999:-1:exon
so has part: feature:565731-565962:-1:exon
so has part: feature:526950-527057:-1:exon
so has part: feature:514736-514869:-1:exon
so has part: feature:514334-514534:-1:exon
so has part: feature:505178-505280:-1:exon
so has part: feature:498365-503845:-1:exon
so has part: feature:492330-493927:-1:exon

position:653755:-1
position: 653755
reference: sequence
type: ReverseStrandPosition
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urn:…
SIO_000300: 1
SIO_000628: feature:653581-653755:-1:exon

position:653581:-1
position: 653581
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:598506-601261:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:594503-594999:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:565731-565962:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:526950-527057:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:514736-514869:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:514334-514534:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:505178-505280:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:498365-503845:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:492330-493927:-1:exon

ZFHX3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8839
gene: ZFHX3
product: zinc finger homeobox 3, transcript variant X6
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 9 samples with support for all annotated introns
transcript id: XM_038185565.1
SIO_010081: ZFHX3
subclass of: SO_0000673
so part of: ZFHX3
location: complement(join(492330..493927,498365..503845,505178..505280,514334..514534,514736..514869,526950..527057,565731..565962,594503..594999,598506..601261,648492..648606,648716..649262))
location: region:492330-649262:-1
so has part: feature:648716-649262:-1:exon
so has part: feature:648492-648606:-1:exon
so has part: feature:598506-601261:-1:exon
so has part: feature:594503-594999:-1:exon
so has part: feature:565731-565962:-1:exon
so has part: feature:526950-527057:-1:exon
so has part: feature:514736-514869:-1:exon
so has part: feature:514334-514534:-1:exon
so has part: feature:505178-505280:-1:exon
so has part: feature:498365-503845:-1:exon
so has part: feature:492330-493927:-1:exon

position:649262:-1
position: 649262
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:648716-649262:-1:exon

position:648716:-1
position: 648716
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:648492-648606:-1:exon

position:648492:-1
position: 648492
reference: sequence
type: ReverseStrandPosition
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position:648606:-1
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reference: sequence
type: ReverseStrandPosition
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urn:…
SIO_000300: 3
SIO_000628: feature:598506-601261:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:594503-594999:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:565731-565962:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:526950-527057:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:514736-514869:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:514334-514534:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:505178-505280:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:498365-503845:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:492330-493927:-1:exon

ZFHX3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8839
gene: ZFHX3
product: zinc finger homeobox 3, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 11 samples with support for all annotated introns
transcript id: XM_038185560.1
SIO_010081: ZFHX3
subclass of: SO_0000673
so part of: ZFHX3
location: complement(join(492330..493927,498365..503845,505178..505280,514334..514534,514736..514869,526950..527057,565731..565962,594503..594999,598506..601261,648492..649262))
location: region:492330-649262:-1
so has part: feature:648492-649262:-1:exon
so has part: feature:598506-601261:-1:exon
so has part: feature:594503-594999:-1:exon
so has part: feature:565731-565962:-1:exon
so has part: feature:526950-527057:-1:exon
so has part: feature:514736-514869:-1:exon
so has part: feature:514334-514534:-1:exon
so has part: feature:505178-505280:-1:exon
so has part: feature:498365-503845:-1:exon
so has part: feature:492330-493927:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:648492-649262:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:598506-601261:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:594503-594999:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:565731-565962:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:526950-527057:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:514736-514869:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:514334-514534:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:505178-505280:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:498365-503845:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:492330-493927:-1:exon

ZFHX3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8839
gene: ZFHX3
product: zinc finger homeobox 3, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 15 samples with support for all annotated introns
transcript id: XM_038185563.1
SIO_010081: ZFHX3
subclass of: SO_0000673
so part of: ZFHX3
location: complement(join(492330..493927,498365..503845,505178..505280,514334..514534,514736..514869,526950..527057,565731..565962,594503..594999,598506..601261,626142..626306))
location: region:492330-626306:-1
so has part: feature:626142-626306:-1:exon
so has part: feature:598506-601261:-1:exon
so has part: feature:594503-594999:-1:exon
so has part: feature:565731-565962:-1:exon
so has part: feature:526950-527057:-1:exon
so has part: feature:514736-514869:-1:exon
so has part: feature:514334-514534:-1:exon
so has part: feature:505178-505280:-1:exon
so has part: feature:498365-503845:-1:exon
so has part: feature:492330-493927:-1:exon

position:626306:-1
position: 626306
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:626142-626306:-1:exon

position:626142:-1
position: 626142
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:598506-601261:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:594503-594999:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:565731-565962:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:526950-527057:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:514736-514869:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:514334-514534:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:505178-505280:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:498365-503845:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:492330-493927:-1:exon

ZFHX3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8839
gene: ZFHX3
product: zinc finger homeobox 3, transcript variant X7
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 11 samples with support for all annotated introns
transcript id: XM_038185566.1
SIO_010081: ZFHX3
subclass of: SO_0000673
so part of: ZFHX3
location: complement(join(492330..493927,498365..503845,505178..505280,514334..514534,514736..514869,526950..527057,565731..565962,594503..594999,598506..601261,616862..617470,626142..626306))
location: region:492330-626306:-1
so has part: feature:626142-626306:-1:exon
so has part: feature:616862-617470:-1:exon
so has part: feature:598506-601261:-1:exon
so has part: feature:594503-594999:-1:exon
so has part: feature:565731-565962:-1:exon
so has part: feature:526950-527057:-1:exon
so has part: feature:514736-514869:-1:exon
so has part: feature:514334-514534:-1:exon
so has part: feature:505178-505280:-1:exon
so has part: feature:498365-503845:-1:exon
so has part: feature:492330-493927:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:626142-626306:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:616862-617470:-1:exon

position:616862:-1
position: 616862
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:617470:-1
position: 617470
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:598506-601261:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:594503-594999:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:565731-565962:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:526950-527057:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:514736-514869:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:514334-514534:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:505178-505280:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:498365-503845:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:492330-493927:-1:exon

ZFHX3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8839
gene: ZFHX3
product: zinc finger homeobox 3, transcript variant X8
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 12 samples with support for all annotated introns
transcript id: XM_038185567.1
SIO_010081: ZFHX3
subclass of: SO_0000673
so part of: ZFHX3
location: complement(join(492330..493927,498365..503845,505178..505280,514334..514534,514736..514869,526950..527057,565731..565962,594503..594999,598506..601261,614901..615035))
location: region:492330-615035:-1
so has part: feature:614901-615035:-1:exon
so has part: feature:598506-601261:-1:exon
so has part: feature:594503-594999:-1:exon
so has part: feature:565731-565962:-1:exon
so has part: feature:526950-527057:-1:exon
so has part: feature:514736-514869:-1:exon
so has part: feature:514334-514534:-1:exon
so has part: feature:505178-505280:-1:exon
so has part: feature:498365-503845:-1:exon
so has part: feature:492330-493927:-1:exon

position:615035:-1
position: 615035
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:614901-615035:-1:exon

position:614901:-1
position: 614901
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:598506-601261:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:594503-594999:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:565731-565962:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:526950-527057:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:514736-514869:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:514334-514534:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:505178-505280:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:498365-503845:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:492330-493927:-1:exon

ZFHX3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8839
gene: ZFHX3
product: zinc finger homeobox 3, transcript variant X9
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 78 samples with support for all annotated introns
transcript id: XM_038185568.1
SIO_010081: ZFHX3
subclass of: SO_0000673
so part of: ZFHX3
location: complement(join(492330..493927,498365..503845,505178..505280,514334..514534,514736..514869,526950..527054,565731..565962,594503..594999,598506..601261))
location: region:492330-601261:-1
so has part: feature:598506-601261:-1:exon
so has part: feature:594503-594999:-1:exon
so has part: feature:565731-565962:-1:exon
so has part: feature:526950-527054:-1:exon
so has part: feature:514736-514869:-1:exon
so has part: feature:514334-514534:-1:exon
so has part: feature:505178-505280:-1:exon
so has part: feature:498365-503845:-1:exon
so has part: feature:492330-493927:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:598506-601261:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:594503-594999:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:565731-565962:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:526950-527054:-1:exon

position:527054:-1
position: 527054
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:514736-514869:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:514334-514534:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:505178-505280:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:498365-503845:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:492330-493927:-1:exon

ZFHX3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8839
gene: ZFHX3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: zinc finger homeobox protein 3 isoform X2
translation: MEGCDSPVIPGKDNGCGIPQHQQWTDLNSTHLPDTAGSMEQPAAESRGPLDSLRVPFPERVPESSAAAGPGTEPAGKEVSCGQCAASFAGLQSYMEHRCAGARPPPPLRGESGSESSEDGDEESDVENLAGEIVYQPDGSAYIVESLSQLVQSGGACGSGSGALPSLLPNSLSKQGEPSAAAPVYPQIINTFHIASSFGKWFEGSDQAFPNTSALAGISPVLHSFRVFDVRHKSNKDYLNSDGSAKSSCVSKDVPNNVDLSKFDGFVLYGKRKPILMCFLCKLSFGYVRSFVTHAVHDHRMTLSEEERKILSNKNISAIIQGIGKDKEPLVSFLEPKNKTFQHPLVSTANLIGPGHSFYGKFSGIRMEGEQALQAGPAGGAEPPPSGVLAPGTLLNLGGLTSSALKTPITSVPLGPLASSPTKSSEGKDPGVAEGEKQEGGDQDSLSEKAEPVEEVEEEEEEEVEEEEEEEEEEEEEEDEDDEGCKGLFPSELEDELEDRPQEDSGAVAGGSSSSSKKDLALSNQSISNSPLMPNVLQTLSRGTASTSSNSASSFVFDGANRRNHLSFNNEGGGANVAEGSRRLDFIDESANKDNATAPEPNESTEGEDGSYISHHQHAGPLCELGGGECPSGSGVECPKCDTVLGSSRSLGGHMTMMHSRNSCKTLKCPKCNWHYKYQQTLEAHMKEKHPEPGGSCVYCKSGQPHPRLARGESYTCGYKPFRCEVCNYSTTTKGNLSIHMQSDKHLNNMQNLQNGGGEQVFSHTAGAAAAAAAAAAAAAANIGSTCGAPSPTKPKTKPTWRCEVCDYETNVARNLRIHMTSEKHMHNMMLLQQNMSQIQHNRHLGLGSLPSPAEAELYQYYLAQNMNLPNLKMDSTSSDAQFMMGGFQLDPTNPMATMTPSLVGGEIPLDMRLGGGQLVSEELMNLGESFTQTNDPSLKLFQCAVCNKFTTDNLDMLGLHMNVERSLPEDEWKAVMGDSYQCKLCRYNTQLKANFQLHCKTDKHVQKYQLVAHIKEGGKANEWRLKCVAIGNPVHLKCNACDYYTNSLEKLRLHTVNSRHEASLKLYKHLQHHESGVEGESCYYHCVLCNYSTKAKLNLIQHVRSMKHQRSESLRKLQRLQKGLPEEEEDLGQIFTIRKCPAADAEAIEDVEGPNETAVDAEEPAKEQESGGDKDQSKWTAPASQAEKELTEPPASSKRISFPSSSESPLSFKWSKTSEETKSEQMYQCPYCKYSNTDVNRLRVHAMTQHSVQPMLRCPLCQDMLNNKIHLQLHLTHLHSVSPDCVEKLIMTVTTPEVMMPSSMFLPAATPEKDGNSTTEELGKQPEISEDSGKSVLPSEGAEHSSDPKPVAADQSSARDDSGFLCWKKGCNQVFKSSAALQTHFNEVHAKRPQLPVSDRHVYKYRCNQCSLAFKTIEKLQLHSQYHVIRAATMCCLCQRSFRTFQALKKHLETSHLELSEADIQQLYGGLLVNGDLLAMGDPSLAEDHTIIVEEDKEEESDLEDKQSPTGSDSGSVQEDSGSEPKRALPFRKGPNFTMEKFLDPSRPYKCTVCKESFTQKNILLVHYNSVSHLHKLKRALQESATGQPEPTSSPDNKPFKCNTCNVAYSQSSTLEIHMRSVLHQTKARAAKLEAAGGSGSSNGAGNSSSSSLSLGSSTPSPVSTNNNNTFTTTNTSNSGTTPIPSLLNQVSSDSLGIAPIGNPVSTSISSPSEPKEVNRKKLADMIASRQQQQQQQQQQQQQQQQQQQQQQQQAQTLAQAQAQVQAHLQQELQQQAALLQSQLFNPALLPHFPMTTETLLQLQQQQHLLFPFYIPSAEFQLNPEVSLPVTSGALTLTGTGPSLLEDLKAQVQLPQQSHPQLLQQQQGQLSLSQPHVLIQQSQHPEKKNKSVVKEKEKETPRERESAERGDNNAASKESLPDNLKPKDKKDFVPGSNSEPSLLPPRIASDARGNATKALLENFGFELVIQYNENKQKVQKKNGKTEQGENLEKLECDTC…
SIO_010081: ZFHX3
subclass of: SO_0000673
so part of: ZFHX3
location: complement(join(492330..493927,498365..503845,505178..505280,514334..514534,514736..514869,526950..527054,565731..565962,594503..594999,598506..601215))
location: region:492330-601215:-1
so has part: feature:598506-601215:-1:exon
so has part: feature:594503-594999:-1:exon
so has part: feature:565731-565962:-1:exon
so has part: feature:526950-527054:-1:exon
so has part: feature:514736-514869:-1:exon
so has part: feature:514334-514534:-1:exon
so has part: feature:505178-505280:-1:exon
so has part: feature:498365-503845:-1:exon
so has part: feature:492330-493927:-1:exon

XP_038041496.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:598506-601215:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:594503-594999:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:565731-565962:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:526950-527054:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:514736-514869:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:514334-514534:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:505178-505280:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:498365-503845:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:492330-493927:-1:exon

ZFHX3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8839
gene: ZFHX3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: zinc finger homeobox protein 3 isoform X1
translation: MEGCDSPVIPGKDNGCGIPQHQQWTDLNSTHLPDTAGSMEQPAAESRGPLDSLRVPFPERVPESSAAAGPGTEPAGKEVSCGQCAASFAGLQSYMEHRCAGARPPPPLRGESGSESSEDGDEESDVENLAGEIVYQPDGSAYIVESLSQLVQSGGACGSGSGALPSLLPNSLSKQGEPSAAAPVYPQIINTFHIASSFGKWFEGSDQAFPNTSALAGISPVLHSFRVFDVRHKSNKDYLNSDGSAKSSCVSKDVPNNVDLSKFDGFVLYGKRKPILMCFLCKLSFGYVRSFVTHAVHDHRMTLSEEERKILSNKNISAIIQGIGKDKEPLVSFLEPKNKTFQHPLVSTANLIGPGHSFYGKFSGIRMEGEQALQAGPAGGAEPPPSGVLAPGTLLNLGGLTSSALKTPITSVPLGPLASSPTKSSEGKDPGVAEGEKQEGGDQDSLSEKAEPVEEVEEEEEEEVEEEEEEEEEEEEEEDEDDEGCKGLFPSELEDELEDRPQEDSGAVAGGSSSSSKKDLALSNQSISNSPLMPNVLQTLSRGTASTSSNSASSFVFDGANRRNHLSFNNEGGGANVAEGSRRLDFIDESANKDNATAPEPNESTEGEDGSYISHHQHAGPLCELGGGECPSGSGVECPKCDTVLGSSRSLGGHMTMMHSRNSCKTLKCPKCNWHYKYQQTLEAHMKEKHPEPGGSCVYCKSGQPHPRLARGESYTCGYKPFRCEVCNYSTTTKGNLSIHMQSDKHLNNMQNLQNGGGEQVFSHTAGAAAAAAAAAAAAAANIGSTCGAPSPTKPKTKPTWRCEVCDYETNVARNLRIHMTSEKHMHNMMLLQQNMSQIQHNRHLGLGSLPSPAEAELYQYYLAQNMNLPNLKMDSTSSDAQFMMGGFQLDPTNPMATMTPSLVGGEIPLDMRLGGGQLVSEELMNLGESFTQTNDPSLKLFQCAVCNKFTTDNLDMLGLHMNVERSLPEDEWKAVMGDSYQCKLCRYNTQLKANFQLHCKTDKHVQKYQLVAHIKEGGKANEWRLKCVAIGNPVHLKCNACDYYTNSLEKLRLHTVNSRHEASLKLYKHLQHHESGVEGESCYYHCVLCNYSTKAKLNLIQHVRSMKHQRSESLRKLQRLQKGLPEEEEDLGQIFTIRKCPAADAEEAIEDVEGPNETAVDAEEPAKEQESGGDKDQSKWTAPASQAEKELTEPPASSKRISFPSSSESPLSFKWSKTSEETKSEQMYQCPYCKYSNTDVNRLRVHAMTQHSVQPMLRCPLCQDMLNNKIHLQLHLTHLHSVSPDCVEKLIMTVTTPEVMMPSSMFLPAATPEKDGNSTTEELGKQPEISEDSGKSVLPSEGAEHSSDPKPVAADQSSARDDSGFLCWKKGCNQVFKSSAALQTHFNEVHAKRPQLPVSDRHVYKYRCNQCSLAFKTIEKLQLHSQYHVIRAATMCCLCQRSFRTFQALKKHLETSHLELSEADIQQLYGGLLVNGDLLAMGDPSLAEDHTIIVEEDKEEESDLEDKQSPTGSDSGSVQEDSGSEPKRALPFRKGPNFTMEKFLDPSRPYKCTVCKESFTQKNILLVHYNSVSHLHKLKRALQESATGQPEPTSSPDNKPFKCNTCNVAYSQSSTLEIHMRSVLHQTKARAAKLEAAGGSGSSNGAGNSSSSSLSLGSSTPSPVSTNNNNTFTTTNTSNSGTTPIPSLLNQVSSDSLGIAPIGNPVSTSISSPSEPKEVNRKKLADMIASRQQQQQQQQQQQQQQQQQQQQQQQQAQTLAQAQAQVQAHLQQELQQQAALLQSQLFNPALLPHFPMTTETLLQLQQQQHLLFPFYIPSAEFQLNPEVSLPVTSGALTLTGTGPSLLEDLKAQVQLPQQSHPQLLQQQQGQLSLSQPHVLIQQSQHPEKKNKSVVKEKEKETPRERESAERGDNNAASKESLPDNLKPKDKKDFVPGSNSEPSLLPPRIASDARGNATKALLENFGFELVIQYNENKQKVQKKNGKTEQGENLEKLECDT…
SIO_010081: ZFHX3
subclass of: SO_0000673
so part of: ZFHX3
location: complement(join(492330..493927,498365..503845,505178..505280,514334..514534,514736..514869,526950..527057,565731..565962,594503..594999,598506..601215))
location: region:492330-601215:-1
so has part: feature:598506-601215:-1:exon
so has part: feature:594503-594999:-1:exon
so has part: feature:565731-565962:-1:exon
so has part: feature:526950-527057:-1:exon
so has part: feature:514736-514869:-1:exon
so has part: feature:514334-514534:-1:exon
so has part: feature:505178-505280:-1:exon
so has part: feature:498365-503845:-1:exon
so has part: feature:492330-493927:-1:exon

XP_027322195.2
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:598506-601215:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:594503-594999:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:565731-565962:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:526950-527057:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:514736-514869:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:514334-514534:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:505178-505280:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:498365-503845:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:492330-493927:-1:exon

ZFHX3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8839
gene: ZFHX3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: zinc finger homeobox protein 3 isoform X1
translation: MEGCDSPVIPGKDNGCGIPQHQQWTDLNSTHLPDTAGSMEQPAAESRGPLDSLRVPFPERVPESSAAAGPGTEPAGKEVSCGQCAASFAGLQSYMEHRCAGARPPPPLRGESGSESSEDGDEESDVENLAGEIVYQPDGSAYIVESLSQLVQSGGACGSGSGALPSLLPNSLSKQGEPSAAAPVYPQIINTFHIASSFGKWFEGSDQAFPNTSALAGISPVLHSFRVFDVRHKSNKDYLNSDGSAKSSCVSKDVPNNVDLSKFDGFVLYGKRKPILMCFLCKLSFGYVRSFVTHAVHDHRMTLSEEERKILSNKNISAIIQGIGKDKEPLVSFLEPKNKTFQHPLVSTANLIGPGHSFYGKFSGIRMEGEQALQAGPAGGAEPPPSGVLAPGTLLNLGGLTSSALKTPITSVPLGPLASSPTKSSEGKDPGVAEGEKQEGGDQDSLSEKAEPVEEVEEEEEEEVEEEEEEEEEEEEEEDEDDEGCKGLFPSELEDELEDRPQEDSGAVAGGSSSSSKKDLALSNQSISNSPLMPNVLQTLSRGTASTSSNSASSFVFDGANRRNHLSFNNEGGGANVAEGSRRLDFIDESANKDNATAPEPNESTEGEDGSYISHHQHAGPLCELGGGECPSGSGVECPKCDTVLGSSRSLGGHMTMMHSRNSCKTLKCPKCNWHYKYQQTLEAHMKEKHPEPGGSCVYCKSGQPHPRLARGESYTCGYKPFRCEVCNYSTTTKGNLSIHMQSDKHLNNMQNLQNGGGEQVFSHTAGAAAAAAAAAAAAAANIGSTCGAPSPTKPKTKPTWRCEVCDYETNVARNLRIHMTSEKHMHNMMLLQQNMSQIQHNRHLGLGSLPSPAEAELYQYYLAQNMNLPNLKMDSTSSDAQFMMGGFQLDPTNPMATMTPSLVGGEIPLDMRLGGGQLVSEELMNLGESFTQTNDPSLKLFQCAVCNKFTTDNLDMLGLHMNVERSLPEDEWKAVMGDSYQCKLCRYNTQLKANFQLHCKTDKHVQKYQLVAHIKEGGKANEWRLKCVAIGNPVHLKCNACDYYTNSLEKLRLHTVNSRHEASLKLYKHLQHHESGVEGESCYYHCVLCNYSTKAKLNLIQHVRSMKHQRSESLRKLQRLQKGLPEEEEDLGQIFTIRKCPAADAEEAIEDVEGPNETAVDAEEPAKEQESGGDKDQSKWTAPASQAEKELTEPPASSKRISFPSSSESPLSFKWSKTSEETKSEQMYQCPYCKYSNTDVNRLRVHAMTQHSVQPMLRCPLCQDMLNNKIHLQLHLTHLHSVSPDCVEKLIMTVTTPEVMMPSSMFLPAATPEKDGNSTTEELGKQPEISEDSGKSVLPSEGAEHSSDPKPVAADQSSARDDSGFLCWKKGCNQVFKSSAALQTHFNEVHAKRPQLPVSDRHVYKYRCNQCSLAFKTIEKLQLHSQYHVIRAATMCCLCQRSFRTFQALKKHLETSHLELSEADIQQLYGGLLVNGDLLAMGDPSLAEDHTIIVEEDKEEESDLEDKQSPTGSDSGSVQEDSGSEPKRALPFRKGPNFTMEKFLDPSRPYKCTVCKESFTQKNILLVHYNSVSHLHKLKRALQESATGQPEPTSSPDNKPFKCNTCNVAYSQSSTLEIHMRSVLHQTKARAAKLEAAGGSGSSNGAGNSSSSSLSLGSSTPSPVSTNNNNTFTTTNTSNSGTTPIPSLLNQVSSDSLGIAPIGNPVSTSISSPSEPKEVNRKKLADMIASRQQQQQQQQQQQQQQQQQQQQQQQQAQTLAQAQAQVQAHLQQELQQQAALLQSQLFNPALLPHFPMTTETLLQLQQQQHLLFPFYIPSAEFQLNPEVSLPVTSGALTLTGTGPSLLEDLKAQVQLPQQSHPQLLQQQQGQLSLSQPHVLIQQSQHPEKKNKSVVKEKEKETPRERESAERGDNNAASKESLPDNLKPKDKKDFVPGSNSEPSLLPPRIASDARGNATKALLENFGFELVIQYNENKQKVQKKNGKTEQGENLEKLECDT…
SIO_010081: ZFHX3
subclass of: SO_0000673
so part of: ZFHX3
location: complement(join(492330..493927,498365..503845,505178..505280,514334..514534,514736..514869,526950..527057,565731..565962,594503..594999,598506..601215))
location: region:492330-601215:-1
so has part: feature:598506-601215:-1:exon
so has part: feature:594503-594999:-1:exon
so has part: feature:565731-565962:-1:exon
so has part: feature:526950-527057:-1:exon
so has part: feature:514736-514869:-1:exon
so has part: feature:514334-514534:-1:exon
so has part: feature:505178-505280:-1:exon
so has part: feature:498365-503845:-1:exon
so has part: feature:492330-493927:-1:exon

XP_038041488.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:598506-601215:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:594503-594999:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:565731-565962:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:526950-527057:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:514736-514869:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:514334-514534:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:505178-505280:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:498365-503845:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:492330-493927:-1:exon

ZFHX3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8839
gene: ZFHX3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: zinc finger homeobox protein 3 isoform X1
translation: MEGCDSPVIPGKDNGCGIPQHQQWTDLNSTHLPDTAGSMEQPAAESRGPLDSLRVPFPERVPESSAAAGPGTEPAGKEVSCGQCAASFAGLQSYMEHRCAGARPPPPLRGESGSESSEDGDEESDVENLAGEIVYQPDGSAYIVESLSQLVQSGGACGSGSGALPSLLPNSLSKQGEPSAAAPVYPQIINTFHIASSFGKWFEGSDQAFPNTSALAGISPVLHSFRVFDVRHKSNKDYLNSDGSAKSSCVSKDVPNNVDLSKFDGFVLYGKRKPILMCFLCKLSFGYVRSFVTHAVHDHRMTLSEEERKILSNKNISAIIQGIGKDKEPLVSFLEPKNKTFQHPLVSTANLIGPGHSFYGKFSGIRMEGEQALQAGPAGGAEPPPSGVLAPGTLLNLGGLTSSALKTPITSVPLGPLASSPTKSSEGKDPGVAEGEKQEGGDQDSLSEKAEPVEEVEEEEEEEVEEEEEEEEEEEEEEDEDDEGCKGLFPSELEDELEDRPQEDSGAVAGGSSSSSKKDLALSNQSISNSPLMPNVLQTLSRGTASTSSNSASSFVFDGANRRNHLSFNNEGGGANVAEGSRRLDFIDESANKDNATAPEPNESTEGEDGSYISHHQHAGPLCELGGGECPSGSGVECPKCDTVLGSSRSLGGHMTMMHSRNSCKTLKCPKCNWHYKYQQTLEAHMKEKHPEPGGSCVYCKSGQPHPRLARGESYTCGYKPFRCEVCNYSTTTKGNLSIHMQSDKHLNNMQNLQNGGGEQVFSHTAGAAAAAAAAAAAAAANIGSTCGAPSPTKPKTKPTWRCEVCDYETNVARNLRIHMTSEKHMHNMMLLQQNMSQIQHNRHLGLGSLPSPAEAELYQYYLAQNMNLPNLKMDSTSSDAQFMMGGFQLDPTNPMATMTPSLVGGEIPLDMRLGGGQLVSEELMNLGESFTQTNDPSLKLFQCAVCNKFTTDNLDMLGLHMNVERSLPEDEWKAVMGDSYQCKLCRYNTQLKANFQLHCKTDKHVQKYQLVAHIKEGGKANEWRLKCVAIGNPVHLKCNACDYYTNSLEKLRLHTVNSRHEASLKLYKHLQHHESGVEGESCYYHCVLCNYSTKAKLNLIQHVRSMKHQRSESLRKLQRLQKGLPEEEEDLGQIFTIRKCPAADAEEAIEDVEGPNETAVDAEEPAKEQESGGDKDQSKWTAPASQAEKELTEPPASSKRISFPSSSESPLSFKWSKTSEETKSEQMYQCPYCKYSNTDVNRLRVHAMTQHSVQPMLRCPLCQDMLNNKIHLQLHLTHLHSVSPDCVEKLIMTVTTPEVMMPSSMFLPAATPEKDGNSTTEELGKQPEISEDSGKSVLPSEGAEHSSDPKPVAADQSSARDDSGFLCWKKGCNQVFKSSAALQTHFNEVHAKRPQLPVSDRHVYKYRCNQCSLAFKTIEKLQLHSQYHVIRAATMCCLCQRSFRTFQALKKHLETSHLELSEADIQQLYGGLLVNGDLLAMGDPSLAEDHTIIVEEDKEEESDLEDKQSPTGSDSGSVQEDSGSEPKRALPFRKGPNFTMEKFLDPSRPYKCTVCKESFTQKNILLVHYNSVSHLHKLKRALQESATGQPEPTSSPDNKPFKCNTCNVAYSQSSTLEIHMRSVLHQTKARAAKLEAAGGSGSSNGAGNSSSSSLSLGSSTPSPVSTNNNNTFTTTNTSNSGTTPIPSLLNQVSSDSLGIAPIGNPVSTSISSPSEPKEVNRKKLADMIASRQQQQQQQQQQQQQQQQQQQQQQQQAQTLAQAQAQVQAHLQQELQQQAALLQSQLFNPALLPHFPMTTETLLQLQQQQHLLFPFYIPSAEFQLNPEVSLPVTSGALTLTGTGPSLLEDLKAQVQLPQQSHPQLLQQQQGQLSLSQPHVLIQQSQHPEKKNKSVVKEKEKETPRERESAERGDNNAASKESLPDNLKPKDKKDFVPGSNSEPSLLPPRIASDARGNATKALLENFGFELVIQYNENKQKVQKKNGKTEQGENLEKLECDT…
SIO_010081: ZFHX3
subclass of: SO_0000673
so part of: ZFHX3
location: complement(join(492330..493927,498365..503845,505178..505280,514334..514534,514736..514869,526950..527057,565731..565962,594503..594999,598506..601215))
location: region:492330-601215:-1
so has part: feature:598506-601215:-1:exon
so has part: feature:594503-594999:-1:exon
so has part: feature:565731-565962:-1:exon
so has part: feature:526950-527057:-1:exon
so has part: feature:514736-514869:-1:exon
so has part: feature:514334-514534:-1:exon
so has part: feature:505178-505280:-1:exon
so has part: feature:498365-503845:-1:exon
so has part: feature:492330-493927:-1:exon

XP_038041489.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:598506-601215:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:594503-594999:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:565731-565962:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:526950-527057:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:514736-514869:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:514334-514534:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:505178-505280:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:498365-503845:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:492330-493927:-1:exon

ZFHX3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8839
gene: ZFHX3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: zinc finger homeobox protein 3 isoform X1
translation: MEGCDSPVIPGKDNGCGIPQHQQWTDLNSTHLPDTAGSMEQPAAESRGPLDSLRVPFPERVPESSAAAGPGTEPAGKEVSCGQCAASFAGLQSYMEHRCAGARPPPPLRGESGSESSEDGDEESDVENLAGEIVYQPDGSAYIVESLSQLVQSGGACGSGSGALPSLLPNSLSKQGEPSAAAPVYPQIINTFHIASSFGKWFEGSDQAFPNTSALAGISPVLHSFRVFDVRHKSNKDYLNSDGSAKSSCVSKDVPNNVDLSKFDGFVLYGKRKPILMCFLCKLSFGYVRSFVTHAVHDHRMTLSEEERKILSNKNISAIIQGIGKDKEPLVSFLEPKNKTFQHPLVSTANLIGPGHSFYGKFSGIRMEGEQALQAGPAGGAEPPPSGVLAPGTLLNLGGLTSSALKTPITSVPLGPLASSPTKSSEGKDPGVAEGEKQEGGDQDSLSEKAEPVEEVEEEEEEEVEEEEEEEEEEEEEEDEDDEGCKGLFPSELEDELEDRPQEDSGAVAGGSSSSSKKDLALSNQSISNSPLMPNVLQTLSRGTASTSSNSASSFVFDGANRRNHLSFNNEGGGANVAEGSRRLDFIDESANKDNATAPEPNESTEGEDGSYISHHQHAGPLCELGGGECPSGSGVECPKCDTVLGSSRSLGGHMTMMHSRNSCKTLKCPKCNWHYKYQQTLEAHMKEKHPEPGGSCVYCKSGQPHPRLARGESYTCGYKPFRCEVCNYSTTTKGNLSIHMQSDKHLNNMQNLQNGGGEQVFSHTAGAAAAAAAAAAAAAANIGSTCGAPSPTKPKTKPTWRCEVCDYETNVARNLRIHMTSEKHMHNMMLLQQNMSQIQHNRHLGLGSLPSPAEAELYQYYLAQNMNLPNLKMDSTSSDAQFMMGGFQLDPTNPMATMTPSLVGGEIPLDMRLGGGQLVSEELMNLGESFTQTNDPSLKLFQCAVCNKFTTDNLDMLGLHMNVERSLPEDEWKAVMGDSYQCKLCRYNTQLKANFQLHCKTDKHVQKYQLVAHIKEGGKANEWRLKCVAIGNPVHLKCNACDYYTNSLEKLRLHTVNSRHEASLKLYKHLQHHESGVEGESCYYHCVLCNYSTKAKLNLIQHVRSMKHQRSESLRKLQRLQKGLPEEEEDLGQIFTIRKCPAADAEEAIEDVEGPNETAVDAEEPAKEQESGGDKDQSKWTAPASQAEKELTEPPASSKRISFPSSSESPLSFKWSKTSEETKSEQMYQCPYCKYSNTDVNRLRVHAMTQHSVQPMLRCPLCQDMLNNKIHLQLHLTHLHSVSPDCVEKLIMTVTTPEVMMPSSMFLPAATPEKDGNSTTEELGKQPEISEDSGKSVLPSEGAEHSSDPKPVAADQSSARDDSGFLCWKKGCNQVFKSSAALQTHFNEVHAKRPQLPVSDRHVYKYRCNQCSLAFKTIEKLQLHSQYHVIRAATMCCLCQRSFRTFQALKKHLETSHLELSEADIQQLYGGLLVNGDLLAMGDPSLAEDHTIIVEEDKEEESDLEDKQSPTGSDSGSVQEDSGSEPKRALPFRKGPNFTMEKFLDPSRPYKCTVCKESFTQKNILLVHYNSVSHLHKLKRALQESATGQPEPTSSPDNKPFKCNTCNVAYSQSSTLEIHMRSVLHQTKARAAKLEAAGGSGSSNGAGNSSSSSLSLGSSTPSPVSTNNNNTFTTTNTSNSGTTPIPSLLNQVSSDSLGIAPIGNPVSTSISSPSEPKEVNRKKLADMIASRQQQQQQQQQQQQQQQQQQQQQQQQAQTLAQAQAQVQAHLQQELQQQAALLQSQLFNPALLPHFPMTTETLLQLQQQQHLLFPFYIPSAEFQLNPEVSLPVTSGALTLTGTGPSLLEDLKAQVQLPQQSHPQLLQQQQGQLSLSQPHVLIQQSQHPEKKNKSVVKEKEKETPRERESAERGDNNAASKESLPDNLKPKDKKDFVPGSNSEPSLLPPRIASDARGNATKALLENFGFELVIQYNENKQKVQKKNGKTEQGENLEKLECDT…
SIO_010081: ZFHX3
subclass of: SO_0000673
so part of: ZFHX3
location: complement(join(492330..493927,498365..503845,505178..505280,514334..514534,514736..514869,526950..527057,565731..565962,594503..594999,598506..601215))
location: region:492330-601215:-1
so has part: feature:598506-601215:-1:exon
so has part: feature:594503-594999:-1:exon
so has part: feature:565731-565962:-1:exon
so has part: feature:526950-527057:-1:exon
so has part: feature:514736-514869:-1:exon
so has part: feature:514334-514534:-1:exon
so has part: feature:505178-505280:-1:exon
so has part: feature:498365-503845:-1:exon
so has part: feature:492330-493927:-1:exon

XP_038041491.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:598506-601215:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:594503-594999:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:565731-565962:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:526950-527057:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:514736-514869:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:514334-514534:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:505178-505280:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:498365-503845:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:492330-493927:-1:exon

ZFHX3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8839
gene: ZFHX3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: zinc finger homeobox protein 3 isoform X1
translation: MEGCDSPVIPGKDNGCGIPQHQQWTDLNSTHLPDTAGSMEQPAAESRGPLDSLRVPFPERVPESSAAAGPGTEPAGKEVSCGQCAASFAGLQSYMEHRCAGARPPPPLRGESGSESSEDGDEESDVENLAGEIVYQPDGSAYIVESLSQLVQSGGACGSGSGALPSLLPNSLSKQGEPSAAAPVYPQIINTFHIASSFGKWFEGSDQAFPNTSALAGISPVLHSFRVFDVRHKSNKDYLNSDGSAKSSCVSKDVPNNVDLSKFDGFVLYGKRKPILMCFLCKLSFGYVRSFVTHAVHDHRMTLSEEERKILSNKNISAIIQGIGKDKEPLVSFLEPKNKTFQHPLVSTANLIGPGHSFYGKFSGIRMEGEQALQAGPAGGAEPPPSGVLAPGTLLNLGGLTSSALKTPITSVPLGPLASSPTKSSEGKDPGVAEGEKQEGGDQDSLSEKAEPVEEVEEEEEEEVEEEEEEEEEEEEEEDEDDEGCKGLFPSELEDELEDRPQEDSGAVAGGSSSSSKKDLALSNQSISNSPLMPNVLQTLSRGTASTSSNSASSFVFDGANRRNHLSFNNEGGGANVAEGSRRLDFIDESANKDNATAPEPNESTEGEDGSYISHHQHAGPLCELGGGECPSGSGVECPKCDTVLGSSRSLGGHMTMMHSRNSCKTLKCPKCNWHYKYQQTLEAHMKEKHPEPGGSCVYCKSGQPHPRLARGESYTCGYKPFRCEVCNYSTTTKGNLSIHMQSDKHLNNMQNLQNGGGEQVFSHTAGAAAAAAAAAAAAAANIGSTCGAPSPTKPKTKPTWRCEVCDYETNVARNLRIHMTSEKHMHNMMLLQQNMSQIQHNRHLGLGSLPSPAEAELYQYYLAQNMNLPNLKMDSTSSDAQFMMGGFQLDPTNPMATMTPSLVGGEIPLDMRLGGGQLVSEELMNLGESFTQTNDPSLKLFQCAVCNKFTTDNLDMLGLHMNVERSLPEDEWKAVMGDSYQCKLCRYNTQLKANFQLHCKTDKHVQKYQLVAHIKEGGKANEWRLKCVAIGNPVHLKCNACDYYTNSLEKLRLHTVNSRHEASLKLYKHLQHHESGVEGESCYYHCVLCNYSTKAKLNLIQHVRSMKHQRSESLRKLQRLQKGLPEEEEDLGQIFTIRKCPAADAEEAIEDVEGPNETAVDAEEPAKEQESGGDKDQSKWTAPASQAEKELTEPPASSKRISFPSSSESPLSFKWSKTSEETKSEQMYQCPYCKYSNTDVNRLRVHAMTQHSVQPMLRCPLCQDMLNNKIHLQLHLTHLHSVSPDCVEKLIMTVTTPEVMMPSSMFLPAATPEKDGNSTTEELGKQPEISEDSGKSVLPSEGAEHSSDPKPVAADQSSARDDSGFLCWKKGCNQVFKSSAALQTHFNEVHAKRPQLPVSDRHVYKYRCNQCSLAFKTIEKLQLHSQYHVIRAATMCCLCQRSFRTFQALKKHLETSHLELSEADIQQLYGGLLVNGDLLAMGDPSLAEDHTIIVEEDKEEESDLEDKQSPTGSDSGSVQEDSGSEPKRALPFRKGPNFTMEKFLDPSRPYKCTVCKESFTQKNILLVHYNSVSHLHKLKRALQESATGQPEPTSSPDNKPFKCNTCNVAYSQSSTLEIHMRSVLHQTKARAAKLEAAGGSGSSNGAGNSSSSSLSLGSSTPSPVSTNNNNTFTTTNTSNSGTTPIPSLLNQVSSDSLGIAPIGNPVSTSISSPSEPKEVNRKKLADMIASRQQQQQQQQQQQQQQQQQQQQQQQQAQTLAQAQAQVQAHLQQELQQQAALLQSQLFNPALLPHFPMTTETLLQLQQQQHLLFPFYIPSAEFQLNPEVSLPVTSGALTLTGTGPSLLEDLKAQVQLPQQSHPQLLQQQQGQLSLSQPHVLIQQSQHPEKKNKSVVKEKEKETPRERESAERGDNNAASKESLPDNLKPKDKKDFVPGSNSEPSLLPPRIASDARGNATKALLENFGFELVIQYNENKQKVQKKNGKTEQGENLEKLECDT…
SIO_010081: ZFHX3
subclass of: SO_0000673
so part of: ZFHX3
location: complement(join(492330..493927,498365..503845,505178..505280,514334..514534,514736..514869,526950..527057,565731..565962,594503..594999,598506..601215))
location: region:492330-601215:-1
so has part: feature:598506-601215:-1:exon
so has part: feature:594503-594999:-1:exon
so has part: feature:565731-565962:-1:exon
so has part: feature:526950-527057:-1:exon
so has part: feature:514736-514869:-1:exon
so has part: feature:514334-514534:-1:exon
so has part: feature:505178-505280:-1:exon
so has part: feature:498365-503845:-1:exon
so has part: feature:492330-493927:-1:exon

XP_038041492.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:598506-601215:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:594503-594999:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:565731-565962:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:526950-527057:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:514736-514869:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:514334-514534:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:505178-505280:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:498365-503845:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:492330-493927:-1:exon

ZFHX3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8839
gene: ZFHX3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: zinc finger homeobox protein 3 isoform X1
translation: MEGCDSPVIPGKDNGCGIPQHQQWTDLNSTHLPDTAGSMEQPAAESRGPLDSLRVPFPERVPESSAAAGPGTEPAGKEVSCGQCAASFAGLQSYMEHRCAGARPPPPLRGESGSESSEDGDEESDVENLAGEIVYQPDGSAYIVESLSQLVQSGGACGSGSGALPSLLPNSLSKQGEPSAAAPVYPQIINTFHIASSFGKWFEGSDQAFPNTSALAGISPVLHSFRVFDVRHKSNKDYLNSDGSAKSSCVSKDVPNNVDLSKFDGFVLYGKRKPILMCFLCKLSFGYVRSFVTHAVHDHRMTLSEEERKILSNKNISAIIQGIGKDKEPLVSFLEPKNKTFQHPLVSTANLIGPGHSFYGKFSGIRMEGEQALQAGPAGGAEPPPSGVLAPGTLLNLGGLTSSALKTPITSVPLGPLASSPTKSSEGKDPGVAEGEKQEGGDQDSLSEKAEPVEEVEEEEEEEVEEEEEEEEEEEEEEDEDDEGCKGLFPSELEDELEDRPQEDSGAVAGGSSSSSKKDLALSNQSISNSPLMPNVLQTLSRGTASTSSNSASSFVFDGANRRNHLSFNNEGGGANVAEGSRRLDFIDESANKDNATAPEPNESTEGEDGSYISHHQHAGPLCELGGGECPSGSGVECPKCDTVLGSSRSLGGHMTMMHSRNSCKTLKCPKCNWHYKYQQTLEAHMKEKHPEPGGSCVYCKSGQPHPRLARGESYTCGYKPFRCEVCNYSTTTKGNLSIHMQSDKHLNNMQNLQNGGGEQVFSHTAGAAAAAAAAAAAAAANIGSTCGAPSPTKPKTKPTWRCEVCDYETNVARNLRIHMTSEKHMHNMMLLQQNMSQIQHNRHLGLGSLPSPAEAELYQYYLAQNMNLPNLKMDSTSSDAQFMMGGFQLDPTNPMATMTPSLVGGEIPLDMRLGGGQLVSEELMNLGESFTQTNDPSLKLFQCAVCNKFTTDNLDMLGLHMNVERSLPEDEWKAVMGDSYQCKLCRYNTQLKANFQLHCKTDKHVQKYQLVAHIKEGGKANEWRLKCVAIGNPVHLKCNACDYYTNSLEKLRLHTVNSRHEASLKLYKHLQHHESGVEGESCYYHCVLCNYSTKAKLNLIQHVRSMKHQRSESLRKLQRLQKGLPEEEEDLGQIFTIRKCPAADAEEAIEDVEGPNETAVDAEEPAKEQESGGDKDQSKWTAPASQAEKELTEPPASSKRISFPSSSESPLSFKWSKTSEETKSEQMYQCPYCKYSNTDVNRLRVHAMTQHSVQPMLRCPLCQDMLNNKIHLQLHLTHLHSVSPDCVEKLIMTVTTPEVMMPSSMFLPAATPEKDGNSTTEELGKQPEISEDSGKSVLPSEGAEHSSDPKPVAADQSSARDDSGFLCWKKGCNQVFKSSAALQTHFNEVHAKRPQLPVSDRHVYKYRCNQCSLAFKTIEKLQLHSQYHVIRAATMCCLCQRSFRTFQALKKHLETSHLELSEADIQQLYGGLLVNGDLLAMGDPSLAEDHTIIVEEDKEEESDLEDKQSPTGSDSGSVQEDSGSEPKRALPFRKGPNFTMEKFLDPSRPYKCTVCKESFTQKNILLVHYNSVSHLHKLKRALQESATGQPEPTSSPDNKPFKCNTCNVAYSQSSTLEIHMRSVLHQTKARAAKLEAAGGSGSSNGAGNSSSSSLSLGSSTPSPVSTNNNNTFTTTNTSNSGTTPIPSLLNQVSSDSLGIAPIGNPVSTSISSPSEPKEVNRKKLADMIASRQQQQQQQQQQQQQQQQQQQQQQQQAQTLAQAQAQVQAHLQQELQQQAALLQSQLFNPALLPHFPMTTETLLQLQQQQHLLFPFYIPSAEFQLNPEVSLPVTSGALTLTGTGPSLLEDLKAQVQLPQQSHPQLLQQQQGQLSLSQPHVLIQQSQHPEKKNKSVVKEKEKETPRERESAERGDNNAASKESLPDNLKPKDKKDFVPGSNSEPSLLPPRIASDARGNATKALLENFGFELVIQYNENKQKVQKKNGKTEQGENLEKLECDT…
SIO_010081: ZFHX3
subclass of: SO_0000673
so part of: ZFHX3
location: complement(join(492330..493927,498365..503845,505178..505280,514334..514534,514736..514869,526950..527057,565731..565962,594503..594999,598506..601215))
location: region:492330-601215:-1
so has part: feature:598506-601215:-1:exon
so has part: feature:594503-594999:-1:exon
so has part: feature:565731-565962:-1:exon
so has part: feature:526950-527057:-1:exon
so has part: feature:514736-514869:-1:exon
so has part: feature:514334-514534:-1:exon
so has part: feature:505178-505280:-1:exon
so has part: feature:498365-503845:-1:exon
so has part: feature:492330-493927:-1:exon

XP_038041493.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:598506-601215:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:594503-594999:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:565731-565962:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:526950-527057:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:514736-514869:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:514334-514534:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:505178-505280:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:498365-503845:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:492330-493927:-1:exon

ZFHX3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8839
gene: ZFHX3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: zinc finger homeobox protein 3 isoform X1
translation: MEGCDSPVIPGKDNGCGIPQHQQWTDLNSTHLPDTAGSMEQPAAESRGPLDSLRVPFPERVPESSAAAGPGTEPAGKEVSCGQCAASFAGLQSYMEHRCAGARPPPPLRGESGSESSEDGDEESDVENLAGEIVYQPDGSAYIVESLSQLVQSGGACGSGSGALPSLLPNSLSKQGEPSAAAPVYPQIINTFHIASSFGKWFEGSDQAFPNTSALAGISPVLHSFRVFDVRHKSNKDYLNSDGSAKSSCVSKDVPNNVDLSKFDGFVLYGKRKPILMCFLCKLSFGYVRSFVTHAVHDHRMTLSEEERKILSNKNISAIIQGIGKDKEPLVSFLEPKNKTFQHPLVSTANLIGPGHSFYGKFSGIRMEGEQALQAGPAGGAEPPPSGVLAPGTLLNLGGLTSSALKTPITSVPLGPLASSPTKSSEGKDPGVAEGEKQEGGDQDSLSEKAEPVEEVEEEEEEEVEEEEEEEEEEEEEEDEDDEGCKGLFPSELEDELEDRPQEDSGAVAGGSSSSSKKDLALSNQSISNSPLMPNVLQTLSRGTASTSSNSASSFVFDGANRRNHLSFNNEGGGANVAEGSRRLDFIDESANKDNATAPEPNESTEGEDGSYISHHQHAGPLCELGGGECPSGSGVECPKCDTVLGSSRSLGGHMTMMHSRNSCKTLKCPKCNWHYKYQQTLEAHMKEKHPEPGGSCVYCKSGQPHPRLARGESYTCGYKPFRCEVCNYSTTTKGNLSIHMQSDKHLNNMQNLQNGGGEQVFSHTAGAAAAAAAAAAAAAANIGSTCGAPSPTKPKTKPTWRCEVCDYETNVARNLRIHMTSEKHMHNMMLLQQNMSQIQHNRHLGLGSLPSPAEAELYQYYLAQNMNLPNLKMDSTSSDAQFMMGGFQLDPTNPMATMTPSLVGGEIPLDMRLGGGQLVSEELMNLGESFTQTNDPSLKLFQCAVCNKFTTDNLDMLGLHMNVERSLPEDEWKAVMGDSYQCKLCRYNTQLKANFQLHCKTDKHVQKYQLVAHIKEGGKANEWRLKCVAIGNPVHLKCNACDYYTNSLEKLRLHTVNSRHEASLKLYKHLQHHESGVEGESCYYHCVLCNYSTKAKLNLIQHVRSMKHQRSESLRKLQRLQKGLPEEEEDLGQIFTIRKCPAADAEEAIEDVEGPNETAVDAEEPAKEQESGGDKDQSKWTAPASQAEKELTEPPASSKRISFPSSSESPLSFKWSKTSEETKSEQMYQCPYCKYSNTDVNRLRVHAMTQHSVQPMLRCPLCQDMLNNKIHLQLHLTHLHSVSPDCVEKLIMTVTTPEVMMPSSMFLPAATPEKDGNSTTEELGKQPEISEDSGKSVLPSEGAEHSSDPKPVAADQSSARDDSGFLCWKKGCNQVFKSSAALQTHFNEVHAKRPQLPVSDRHVYKYRCNQCSLAFKTIEKLQLHSQYHVIRAATMCCLCQRSFRTFQALKKHLETSHLELSEADIQQLYGGLLVNGDLLAMGDPSLAEDHTIIVEEDKEEESDLEDKQSPTGSDSGSVQEDSGSEPKRALPFRKGPNFTMEKFLDPSRPYKCTVCKESFTQKNILLVHYNSVSHLHKLKRALQESATGQPEPTSSPDNKPFKCNTCNVAYSQSSTLEIHMRSVLHQTKARAAKLEAAGGSGSSNGAGNSSSSSLSLGSSTPSPVSTNNNNTFTTTNTSNSGTTPIPSLLNQVSSDSLGIAPIGNPVSTSISSPSEPKEVNRKKLADMIASRQQQQQQQQQQQQQQQQQQQQQQQQAQTLAQAQAQVQAHLQQELQQQAALLQSQLFNPALLPHFPMTTETLLQLQQQQHLLFPFYIPSAEFQLNPEVSLPVTSGALTLTGTGPSLLEDLKAQVQLPQQSHPQLLQQQQGQLSLSQPHVLIQQSQHPEKKNKSVVKEKEKETPRERESAERGDNNAASKESLPDNLKPKDKKDFVPGSNSEPSLLPPRIASDARGNATKALLENFGFELVIQYNENKQKVQKKNGKTEQGENLEKLECDT…
SIO_010081: ZFHX3
subclass of: SO_0000673
so part of: ZFHX3
location: complement(join(492330..493927,498365..503845,505178..505280,514334..514534,514736..514869,526950..527057,565731..565962,594503..594999,598506..601215))
location: region:492330-601215:-1
so has part: feature:598506-601215:-1:exon
so has part: feature:594503-594999:-1:exon
so has part: feature:565731-565962:-1:exon
so has part: feature:526950-527057:-1:exon
so has part: feature:514736-514869:-1:exon
so has part: feature:514334-514534:-1:exon
so has part: feature:505178-505280:-1:exon
so has part: feature:498365-503845:-1:exon
so has part: feature:492330-493927:-1:exon

XP_038041494.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:598506-601215:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:594503-594999:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:565731-565962:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:526950-527057:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:514736-514869:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:514334-514534:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:505178-505280:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:498365-503845:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:492330-493927:-1:exon

ZFHX3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8839
gene: ZFHX3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: zinc finger homeobox protein 3 isoform X1
translation: MEGCDSPVIPGKDNGCGIPQHQQWTDLNSTHLPDTAGSMEQPAAESRGPLDSLRVPFPERVPESSAAAGPGTEPAGKEVSCGQCAASFAGLQSYMEHRCAGARPPPPLRGESGSESSEDGDEESDVENLAGEIVYQPDGSAYIVESLSQLVQSGGACGSGSGALPSLLPNSLSKQGEPSAAAPVYPQIINTFHIASSFGKWFEGSDQAFPNTSALAGISPVLHSFRVFDVRHKSNKDYLNSDGSAKSSCVSKDVPNNVDLSKFDGFVLYGKRKPILMCFLCKLSFGYVRSFVTHAVHDHRMTLSEEERKILSNKNISAIIQGIGKDKEPLVSFLEPKNKTFQHPLVSTANLIGPGHSFYGKFSGIRMEGEQALQAGPAGGAEPPPSGVLAPGTLLNLGGLTSSALKTPITSVPLGPLASSPTKSSEGKDPGVAEGEKQEGGDQDSLSEKAEPVEEVEEEEEEEVEEEEEEEEEEEEEEDEDDEGCKGLFPSELEDELEDRPQEDSGAVAGGSSSSSKKDLALSNQSISNSPLMPNVLQTLSRGTASTSSNSASSFVFDGANRRNHLSFNNEGGGANVAEGSRRLDFIDESANKDNATAPEPNESTEGEDGSYISHHQHAGPLCELGGGECPSGSGVECPKCDTVLGSSRSLGGHMTMMHSRNSCKTLKCPKCNWHYKYQQTLEAHMKEKHPEPGGSCVYCKSGQPHPRLARGESYTCGYKPFRCEVCNYSTTTKGNLSIHMQSDKHLNNMQNLQNGGGEQVFSHTAGAAAAAAAAAAAAAANIGSTCGAPSPTKPKTKPTWRCEVCDYETNVARNLRIHMTSEKHMHNMMLLQQNMSQIQHNRHLGLGSLPSPAEAELYQYYLAQNMNLPNLKMDSTSSDAQFMMGGFQLDPTNPMATMTPSLVGGEIPLDMRLGGGQLVSEELMNLGESFTQTNDPSLKLFQCAVCNKFTTDNLDMLGLHMNVERSLPEDEWKAVMGDSYQCKLCRYNTQLKANFQLHCKTDKHVQKYQLVAHIKEGGKANEWRLKCVAIGNPVHLKCNACDYYTNSLEKLRLHTVNSRHEASLKLYKHLQHHESGVEGESCYYHCVLCNYSTKAKLNLIQHVRSMKHQRSESLRKLQRLQKGLPEEEEDLGQIFTIRKCPAADAEEAIEDVEGPNETAVDAEEPAKEQESGGDKDQSKWTAPASQAEKELTEPPASSKRISFPSSSESPLSFKWSKTSEETKSEQMYQCPYCKYSNTDVNRLRVHAMTQHSVQPMLRCPLCQDMLNNKIHLQLHLTHLHSVSPDCVEKLIMTVTTPEVMMPSSMFLPAATPEKDGNSTTEELGKQPEISEDSGKSVLPSEGAEHSSDPKPVAADQSSARDDSGFLCWKKGCNQVFKSSAALQTHFNEVHAKRPQLPVSDRHVYKYRCNQCSLAFKTIEKLQLHSQYHVIRAATMCCLCQRSFRTFQALKKHLETSHLELSEADIQQLYGGLLVNGDLLAMGDPSLAEDHTIIVEEDKEEESDLEDKQSPTGSDSGSVQEDSGSEPKRALPFRKGPNFTMEKFLDPSRPYKCTVCKESFTQKNILLVHYNSVSHLHKLKRALQESATGQPEPTSSPDNKPFKCNTCNVAYSQSSTLEIHMRSVLHQTKARAAKLEAAGGSGSSNGAGNSSSSSLSLGSSTPSPVSTNNNNTFTTTNTSNSGTTPIPSLLNQVSSDSLGIAPIGNPVSTSISSPSEPKEVNRKKLADMIASRQQQQQQQQQQQQQQQQQQQQQQQQAQTLAQAQAQVQAHLQQELQQQAALLQSQLFNPALLPHFPMTTETLLQLQQQQHLLFPFYIPSAEFQLNPEVSLPVTSGALTLTGTGPSLLEDLKAQVQLPQQSHPQLLQQQQGQLSLSQPHVLIQQSQHPEKKNKSVVKEKEKETPRERESAERGDNNAASKESLPDNLKPKDKKDFVPGSNSEPSLLPPRIASDARGNATKALLENFGFELVIQYNENKQKVQKKNGKTEQGENLEKLECDT…
SIO_010081: ZFHX3
subclass of: SO_0000673
so part of: ZFHX3
location: complement(join(492330..493927,498365..503845,505178..505280,514334..514534,514736..514869,526950..527057,565731..565962,594503..594999,598506..601215))
location: region:492330-601215:-1
so has part: feature:598506-601215:-1:exon
so has part: feature:594503-594999:-1:exon
so has part: feature:565731-565962:-1:exon
so has part: feature:526950-527057:-1:exon
so has part: feature:514736-514869:-1:exon
so has part: feature:514334-514534:-1:exon
so has part: feature:505178-505280:-1:exon
so has part: feature:498365-503845:-1:exon
so has part: feature:492330-493927:-1:exon

XP_038041495.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:598506-601215:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:594503-594999:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:565731-565962:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:526950-527057:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:514736-514869:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:514334-514534:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:505178-505280:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:498365-503845:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:492330-493927:-1:exon

LOC106019041
type: Gene
subclass of: SO_0000704
RO_0002162: 8839
gene: LOC106019041
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(654517..957336)
location: region:654517-957336:-1
so has part: feature:654517-957336:-1:exon
subclass of: SO_0000011

106019041
type: Gene
SIO_000068: ncbigene

position:654517:-1
position: 654517
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:957336:-1
position: 957336
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:654517-957336:-1:exon

LOC106019041
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 8839
nc RNA class: lncRNA
gene: LOC106019041
product: uncharacterized LOC106019041, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 7 samples with support for all annotated introns
transcript id: XR_005268885.1
SIO_010081: LOC106019041
subclass of: SO_0000673
so part of: LOC106019041
location: complement(join(654517..654635,661999..662185,739023..739136,896553..896658,957266..957336))
location: region:654517-957336:-1
so has part: feature:957266-957336:-1:exon
so has part: feature:896553-896658:-1:exon
so has part: feature:739023-739136:-1:exon
so has part: feature:661999-662185:-1:exon
so has part: feature:654517-654635:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:957266-957336:-1:exon

position:957266:-1
position: 957266
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:896553-896658:-1:exon

position:896553:-1
position: 896553
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:896658:-1
position: 896658
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:739023-739136:-1:exon

position:739023:-1
position: 739023
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:739136:-1
position: 739136
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:661999-662185:-1:exon

position:661999:-1
position: 661999
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:662185:-1
position: 662185
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:654517-654635:-1:exon

position:654635:-1
position: 654635
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC106019041
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 8839
nc RNA class: lncRNA
gene: LOC106019041
product: uncharacterized LOC106019041, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 11 samples with support for all annotated introns
transcript id: XR_003499803.2
SIO_010081: LOC106019041
subclass of: SO_0000673
so part of: LOC106019041
location: complement(join(655622..657459,661999..662185,739023..739136,896553..896658,957266..957336))
location: region:655622-957336:-1
so has part: feature:957266-957336:-1:exon
so has part: feature:896553-896658:-1:exon
so has part: feature:739023-739136:-1:exon
so has part: feature:661999-662185:-1:exon
so has part: feature:655622-657459:-1:exon

position:655622:-1
position: 655622
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:957266-957336:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:896553-896658:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:739023-739136:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:661999-662185:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:655622-657459:-1:exon

position:657459:-1
position: 657459
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC106019041
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 8839
nc RNA class: lncRNA
gene: LOC106019041
product: uncharacterized LOC106019041, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 6 samples with support for all annotated introns
transcript id: XR_005268886.1
SIO_010081: LOC106019041
subclass of: SO_0000673
so part of: LOC106019041
location: complement(join(659819..661866,661999..662185,739023..739136,896553..896658,957266..957336))
location: region:659819-957336:-1
so has part: feature:957266-957336:-1:exon
so has part: feature:896553-896658:-1:exon
so has part: feature:739023-739136:-1:exon
so has part: feature:661999-662185:-1:exon
so has part: feature:659819-661866:-1:exon

position:659819:-1
position: 659819
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:957266-957336:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:896553-896658:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:739023-739136:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:661999-662185:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:659819-661866:-1:exon

position:661866:-1
position: 661866
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC106019041
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 8839
nc RNA class: lncRNA
gene: LOC106019041
product: uncharacterized LOC106019041, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 11 samples with support for all annotated introns
transcript id: XR_001193558.4
SIO_010081: LOC106019041
subclass of: SO_0000673
so part of: LOC106019041
location: complement(join(883794..884821,896553..896658,957266..957336))
location: region:883794-957336:-1
so has part: feature:957266-957336:-1:exon
so has part: feature:896553-896658:-1:exon
so has part: feature:883794-884821:-1:exon

position:883794:-1
position: 883794
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:957266-957336:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:896553-896658:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:883794-884821:-1:exon

position:884821:-1
position: 884821
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC106019041
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 8839
nc RNA class: lncRNA
gene: LOC106019041
product: uncharacterized LOC106019041, transcript variant X5
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 11 samples with support for all annotated introns
transcript id: XR_001193557.4
SIO_010081: LOC106019041
subclass of: SO_0000673
so part of: LOC106019041
location: complement(join(883794..884821,896553..896658,897336..897465,957266..957332))
location: region:883794-957332:-1
so has part: feature:957266-957332:-1:exon
so has part: feature:897336-897465:-1:exon
so has part: feature:896553-896658:-1:exon
so has part: feature:883794-884821:-1:exon

position:957332:-1
position: 957332
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:957266-957332:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:897336-897465:-1:exon

position:897336:-1
position: 897336
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:897465:-1
position: 897465
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:896553-896658:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:883794-884821:-1:exon

LOC113844801
type: Gene
subclass of: SO_0000704
RO_0002162: 8839
gene: LOC113844801
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1105832..1110932)
location: region:1105832-1110932:-1
so has part: feature:1105832-1110932:-1:exon
subclass of: SO_0000011

113844801
type: Gene
SIO_000068: ncbigene

position:1105832:-1
position: 1105832
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1110932:-1
position: 1110932
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1105832-1110932:-1:exon

LOC113844801
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 8839
nc RNA class: lncRNA
gene: LOC113844801
product: uncharacterized LOC113844801
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 11 samples with support for all annotated introns
transcript id: XR_005268806.1
SIO_010081: LOC113844801
subclass of: SO_0000673
so part of: LOC113844801
location: complement(join(1105832..1106496,1110509..1110932))
location: region:1105832-1110932:-1
so has part: feature:1110509-1110932:-1:exon
so has part: feature:1105832-1106496:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1110509-1110932:-1:exon

position:1110509:-1
position: 1110509
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1105832-1106496:-1:exon

position:1106496:-1
position: 1106496
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

PSMD7
type: Gene
subclass of: SO_0000704
RO_0002162: 8839
gene: PSMD7
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1109743..1115988
location: region:1109743-1115988:1
so has part: feature:1109743-1115988:1:exon
subclass of: SO_0000010

101801540
type: Gene
SIO_000068: ncbigene

position:1109743:1
position: 1109743
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1115988:1
position: 1115988
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1109743-1115988:1:exon

PSMD7
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8839
gene: PSMD7
product: proteasome 26S subunit, non-ATPase 7
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 13 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 126 samples with support for all annotated introns
transcript id: XM_027465851.2
SIO_010081: PSMD7
subclass of: SO_0000673
so part of: PSMD7
location: join(1109743..1109906,1110558..1110649,1111982..1112074,1112838..1112935,1113208..1113288,1114669..1114760,1115463..1115988)
location: region:1109743-1115988:1
so has part: feature:1109743-1109906:1:exon
so has part: feature:1110558-1110649:1:exon
so has part: feature:1111982-1112074:1:exon
so has part: feature:1112838-1112935:1:exon
so has part: feature:1113208-1113288:1:exon
so has part: feature:1114669-1114760:1:exon
so has part: feature:1115463-1115988:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1109743-1109906:1:exon

position:1109906:1
position: 1109906
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1110558-1110649:1:exon

position:1110558:1
position: 1110558
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1110649:1
position: 1110649
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1111982-1112074:1:exon

position:1111982:1
position: 1111982
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1112074:1
position: 1112074
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1112838-1112935:1:exon

position:1112838:1
position: 1112838
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1112935:1
position: 1112935
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1113208-1113288:1:exon

position:1113208:1
position: 1113208
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1113288:1
position: 1113288
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1114669-1114760:1:exon

position:1114669:1
position: 1114669
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1114760:1
position: 1114760
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1115463-1115988:1:exon

position:1115463:1
position: 1115463
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

PSMD7
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8839
gene: PSMD7
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: 26S proteasome non-ATPase regulatory subunit 7
translation: MPELAVERVVVHPLVLLSVVDHFNRIGKVGNQKRVVGVLLGSWQKKILDVSNSFAVPFDEDDKDDTVWFLDHDYLENMYGMFKKVNARERIVGWYHTGPKLHKNDIAINELMKRYCPNSVLVIIDVKPKDLGLPTEAYISVEEVHDDGTPTSKTFEHVTSEIGAEEAEEVGVEHLLRDIKDTTVGTLSQRITNQVHGLKGLNSKLLDIRSYLEKVAMGKLPINHQIIYHLQDVFNLLPDVNLQEFVKAFYLKTNDQMVVVYLASLIRSVVALHNLINNKIANRDAEKKEGQEKEESKKERKDEKEKDKEKSDVKKEEKKDKK
SIO_010081: PSMD7
subclass of: SO_0000673
so part of: PSMD7
location: join(1109833..1109906,1110558..1110649,1111982..1112074,1112838..1112935,1113208..1113288,1114669..1114760,1115463..1115901)
location: region:1109833-1115901:1
so has part: feature:1109833-1109906:1:exon
so has part: feature:1110558-1110649:1:exon
so has part: feature:1111982-1112074:1:exon
so has part: feature:1112838-1112935:1:exon
so has part: feature:1113208-1113288:1:exon
so has part: feature:1114669-1114760:1:exon
so has part: feature:1115463-1115901:1:exon

XP_027321652.1
type: Protein
SIO_000068: ncbiprotein

position:1109833:1
position: 1109833
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1115901:1
position: 1115901
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1109833-1109906:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1110558-1110649:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1111982-1112074:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1112838-1112935:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1113208-1113288:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1114669-1114760:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1115463-1115901:1:exon

WWP2
type: Gene
subclass of: SO_0000704
RO_0002162: 8839
gene: WWP2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1117358..1148933)
location: region:1117358-1148933:-1
so has part: feature:1117358-1148933:-1:exon
subclass of: SO_0000010

101801353
type: Gene
SIO_000068: ncbigene

position:1117358:-1
position: 1117358
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1148933:-1
position: 1148933
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1117358-1148933:-1:exon

WWP2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8839
gene: WWP2
product: WW domain containing E3 ubiquitin protein ligase 2, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 33 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 126 samples with support for all annotated introns
transcript id: XM_038185368.1
SIO_010081: WWP2
subclass of: SO_0000673
so part of: WWP2
location: complement(join(1117358..1118883,1119087..1119159,1120021..1120117,1120277..1120381,1120713..1120833,1121344..1121484,1121600..1121733,1122601..1122760,1123888..1123976,1124057..1124128,1124242..1124320,1124659..1124787,1125237..1125318,1127087..1127141,1129467..1129641,1131072..1131161,1135403..1135610,1137729..1137868,1141311..1141407,1142356..1142493,1146308..1146426,1146661..1146808,1147365..1147449,1148820..1148933))
location: region:1117358-1148933:-1
so has part: feature:1148820-1148933:-1:exon
so has part: feature:1147365-1147449:-1:exon
so has part: feature:1146661-1146808:-1:exon
so has part: feature:1146308-1146426:-1:exon
so has part: feature:1142356-1142493:-1:exon
so has part: feature:1141311-1141407:-1:exon
so has part: feature:1137729-1137868:-1:exon
so has part: feature:1135403-1135610:-1:exon
so has part: feature:1131072-1131161:-1:exon
so has part: feature:1129467-1129641:-1:exon
so has part: feature:1127087-1127141:-1:exon
so has part: feature:1125237-1125318:-1:exon
so has part: feature:1124659-1124787:-1:exon
so has part: feature:1124242-1124320:-1:exon
so has part: feature:1124057-1124128:-1:exon
so has part: feature:1123888-1123976:-1:exon
so has part: feature:1122601-1122760:-1:exon
so has part: feature:1121600-1121733:-1:exon
so has part: feature:1121344-1121484:-1:exon
so has part: feature:1120713-1120833:-1:exon
so has part: feature:1120277-1120381:-1:exon
so has part: feature:1120021-1120117:-1:exon
so has part: feature:1119087-1119159:-1:exon
so has part: feature:1117358-1118883:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1148820-1148933:-1:exon

position:1148820:-1
position: 1148820
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1147365-1147449:-1:exon

position:1147365:-1
position: 1147365
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1147449:-1
position: 1147449
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1146661-1146808:-1:exon

position:1146661:-1
position: 1146661
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1146808:-1
position: 1146808
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1146308-1146426:-1:exon

position:1146308:-1
position: 1146308
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1146426:-1
position: 1146426
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1142356-1142493:-1:exon

position:1142356:-1
position: 1142356
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1142493:-1
position: 1142493
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1141311-1141407:-1:exon

position:1141311:-1
position: 1141311
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1141407:-1
position: 1141407
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1137729-1137868:-1:exon

position:1137729:-1
position: 1137729
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1137868:-1
position: 1137868
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1135403-1135610:-1:exon

position:1135403:-1
position: 1135403
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1135610:-1
position: 1135610
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:1131072-1131161:-1:exon

position:1131072:-1
position: 1131072
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1131161:-1
position: 1131161
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:1129467-1129641:-1:exon

position:1129467:-1
position: 1129467
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1129641:-1
position: 1129641
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:1127087-1127141:-1:exon

position:1127087:-1
position: 1127087
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1127141:-1
position: 1127141
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:1125237-1125318:-1:exon

position:1125237:-1
position: 1125237
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1125318:-1
position: 1125318
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:1124659-1124787:-1:exon

position:1124659:-1
position: 1124659
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1124787:-1
position: 1124787
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:1124242-1124320:-1:exon

position:1124242:-1
position: 1124242
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1124320:-1
position: 1124320
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:1124057-1124128:-1:exon

position:1124057:-1
position: 1124057
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1124128:-1
position: 1124128
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:1123888-1123976:-1:exon

position:1123888:-1
position: 1123888
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1123976:-1
position: 1123976
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:1122601-1122760:-1:exon

position:1122601:-1
position: 1122601
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1122760:-1
position: 1122760
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:1121600-1121733:-1:exon

position:1121600:-1
position: 1121600
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1121733:-1
position: 1121733
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:1121344-1121484:-1:exon

position:1121344:-1
position: 1121344
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1121484:-1
position: 1121484
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:1120713-1120833:-1:exon

position:1120713:-1
position: 1120713
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1120833:-1
position: 1120833
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:1120277-1120381:-1:exon

position:1120277:-1
position: 1120277
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1120381:-1
position: 1120381
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 22
SIO_000628: feature:1120021-1120117:-1:exon

position:1120021:-1
position: 1120021
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1120117:-1
position: 1120117
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 23
SIO_000628: feature:1119087-1119159:-1:exon

position:1119087:-1
position: 1119087
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1119159:-1
position: 1119159
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 24
SIO_000628: feature:1117358-1118883:-1:exon

position:1118883:-1
position: 1118883
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

WWP2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8839
gene: WWP2
product: WW domain containing E3 ubiquitin protein ligase 2, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 17 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 46 samples with support for all annotated introns
transcript id: XM_038185369.1
SIO_010081: WWP2
subclass of: SO_0000673
so part of: WWP2
location: complement(join(1117358..1118883,1119087..1119159,1120021..1120117,1120277..1120381,1120713..1120833,1121344..1121484,1121600..1121733,1122601..1122760,1123888..1123976,1124057..1124128,1124242..1124320,1124659..1124787,1125237..1125318,1127087..1127141,1129467..1129641,1135403..1135610,1137729..1137868,1141311..1141407,1142356..1142493,1146308..1146426,1146661..1146808,1147365..1147449))
location: region:1117358-1147449:-1
so has part: feature:1147365-1147449:-1:exon
so has part: feature:1146661-1146808:-1:exon
so has part: feature:1146308-1146426:-1:exon
so has part: feature:1142356-1142493:-1:exon
so has part: feature:1141311-1141407:-1:exon
so has part: feature:1137729-1137868:-1:exon
so has part: feature:1135403-1135610:-1:exon
so has part: feature:1129467-1129641:-1:exon
so has part: feature:1127087-1127141:-1:exon
so has part: feature:1125237-1125318:-1:exon
so has part: feature:1124659-1124787:-1:exon
so has part: feature:1124242-1124320:-1:exon
so has part: feature:1124057-1124128:-1:exon
so has part: feature:1123888-1123976:-1:exon
so has part: feature:1122601-1122760:-1:exon
so has part: feature:1121600-1121733:-1:exon
so has part: feature:1121344-1121484:-1:exon
so has part: feature:1120713-1120833:-1:exon
so has part: feature:1120277-1120381:-1:exon
so has part: feature:1120021-1120117:-1:exon
so has part: feature:1119087-1119159:-1:exon
so has part: feature:1117358-1118883:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1147365-1147449:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1146661-1146808:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1146308-1146426:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1142356-1142493:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1141311-1141407:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1137729-1137868:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1135403-1135610:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1129467-1129641:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1127087-1127141:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1125237-1125318:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1124659-1124787:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1124242-1124320:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1124057-1124128:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1123888-1123976:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1122601-1122760:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1121600-1121733:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1121344-1121484:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:1120713-1120833:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:1120277-1120381:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:1120021-1120117:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:1119087-1119159:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:1117358-1118883:-1:exon

WWP2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8839
gene: WWP2
product: WW domain containing E3 ubiquitin protein ligase 2, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 14 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 83 samples with support for all annotated introns
transcript id: XM_038185370.1
SIO_010081: WWP2
subclass of: SO_0000673
so part of: WWP2
location: complement(join(1117358..1118883,1119087..1119159,1120021..1120117,1120277..1120381,1120713..1120833,1121344..1121484,1121600..1121733,1122601..1122760,1123888..1123976,1124057..1124128,1124242..1124320,1124659..1124787,1125237..1125318,1127087..1127141,1127356..1127533))
location: region:1117358-1127533:-1
so has part: feature:1127356-1127533:-1:exon
so has part: feature:1127087-1127141:-1:exon
so has part: feature:1125237-1125318:-1:exon
so has part: feature:1124659-1124787:-1:exon
so has part: feature:1124242-1124320:-1:exon
so has part: feature:1124057-1124128:-1:exon
so has part: feature:1123888-1123976:-1:exon
so has part: feature:1122601-1122760:-1:exon
so has part: feature:1121600-1121733:-1:exon
so has part: feature:1121344-1121484:-1:exon
so has part: feature:1120713-1120833:-1:exon
so has part: feature:1120277-1120381:-1:exon
so has part: feature:1120021-1120117:-1:exon
so has part: feature:1119087-1119159:-1:exon
so has part: feature:1117358-1118883:-1:exon

position:1127533:-1
position: 1127533
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1127356-1127533:-1:exon

position:1127356:-1
position: 1127356
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1127087-1127141:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1125237-1125318:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1124659-1124787:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1124242-1124320:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1124057-1124128:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1123888-1123976:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1122601-1122760:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1121600-1121733:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1121344-1121484:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1120713-1120833:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1120277-1120381:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1120021-1120117:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1119087-1119159:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1117358-1118883:-1:exon

WWP2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8839
gene: WWP2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: NEDD4-like E3 ubiquitin-protein ligase WWP2 isoform X2
translation: MASASSSRARAGPPCEKSQLSVKVVSVKPKAQSRQPRLSCYVEVAGDGLPSETKKTGKQMGSSELLWNEILVLNVTAQSHLDLKVWSCHTLRNELLGTASVSLWNLLKSGGKLENRQLTLNLQTENKGSVVSGGELTIFLDGPAVDLGSLPNGSAVTEGSQVPGRDPSSMAAATESRQQPPATNCFGSRSRTHRHAAAAARQGAGSGEQSPSTRSRHRQPAKSQAPGSTMNGTANGTVNGDVTGAADMEEERPAAGATMTTPMAPSTADGPAAPALSSSGEPEEAAPGSSTPQARAAVLALDALPPGWEKRVDPRGRYYYVDHNTRTTTWQRPTAEYVRNYEQWQSQRNQLQGAMQQFSQRFLYQSSGAPSDNDPLGPLPPGWEKRQDNGRVYYVNHNTRTTQWEDPRTQGMIQEPPLPPGWEMKYTNEGVRYFVDHNTRTTTFKDPRPGFESGSKQGGSPGAYDRSFRWKYHQFRFLCHSNALPSHVKISVSRQTLFEDSFQQIMNMKPYDLRRRLYIIMRGEEGLDYGGIAREWFFLLSHEVLNPMYCLFEYAGKNNYCLQINPASSINPDHLTYFRFIGRFIAMALYHGKFIDTGFTLPFYKRMLNKRPTLKDLESIDPEFYNSIVWTKENSLEECGLELYFIQDMEILGKVTTHELKEGGESIRVTEENKEEYIMLLTDWRFTRGVEEQTKAFLDGFNEVVPLEWLRYFDEKELELMLCGMQEIDMNDWQKNTIYRHYTKNSKQIQWFWQVVKEMDNEKRIRLLQFVTGTCRLPVGGFAELIGSNGPQKFCIDKVGKETWLPRSHTCFNRLDLPPYKSYEQLKEKLLYAIEETEGFGQE
SIO_010081: WWP2
subclass of: SO_0000673
so part of: WWP2
location: complement(join(1118784..1118883,1119087..1119159,1120021..1120117,1120277..1120381,1120713..1120833,1121344..1121484,1121600..1121733,1122601..1122760,1123888..1123976,1124057..1124128,1124242..1124320,1124659..1124787,1125237..1125318,1127087..1127141,1129467..1129641,1135403..1135610,1137729..1137868,1141311..1141407,1142356..1142493,1146308..1146426,1146661..1146808,1147365..1147434))
location: region:1118784-1147434:-1
so has part: feature:1147365-1147434:-1:exon
so has part: feature:1146661-1146808:-1:exon
so has part: feature:1146308-1146426:-1:exon
so has part: feature:1142356-1142493:-1:exon
so has part: feature:1141311-1141407:-1:exon
so has part: feature:1137729-1137868:-1:exon
so has part: feature:1135403-1135610:-1:exon
so has part: feature:1129467-1129641:-1:exon
so has part: feature:1127087-1127141:-1:exon
so has part: feature:1125237-1125318:-1:exon
so has part: feature:1124659-1124787:-1:exon
so has part: feature:1124242-1124320:-1:exon
so has part: feature:1124057-1124128:-1:exon
so has part: feature:1123888-1123976:-1:exon
so has part: feature:1122601-1122760:-1:exon
so has part: feature:1121600-1121733:-1:exon
so has part: feature:1121344-1121484:-1:exon
so has part: feature:1120713-1120833:-1:exon
so has part: feature:1120277-1120381:-1:exon
so has part: feature:1120021-1120117:-1:exon
so has part: feature:1119087-1119159:-1:exon
so has part: feature:1118784-1118883:-1:exon

XP_038041297.1
type: Protein
SIO_000068: ncbiprotein

position:1118784:-1
position: 1118784
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1147434:-1
position: 1147434
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1147365-1147434:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1146661-1146808:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1146308-1146426:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1142356-1142493:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1141311-1141407:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1137729-1137868:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1135403-1135610:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1129467-1129641:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1127087-1127141:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1125237-1125318:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1124659-1124787:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1124242-1124320:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1124057-1124128:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1123888-1123976:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1122601-1122760:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1121600-1121733:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1121344-1121484:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:1120713-1120833:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:1120277-1120381:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:1120021-1120117:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:1119087-1119159:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:1118784-1118883:-1:exon

WWP2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8839
gene: WWP2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: NEDD4-like E3 ubiquitin-protein ligase WWP2 isoform X1
translation: MASASSSRARAGPPCEKSQLSVKVVSVKPKAQSRQPRLSCYVEVAGDGLPSETKKTGKQMGSSELLWNEILVLNVTAQSHLDLKVWSCHTLRNELLGTASVSLWNLLKSGGKLENRQLTLNLQTENKGSVVSGGELTIFLDGPAVDLGSLPNGSAVTEGSQVPGRDPSSMAAATESRQQPPATNCFGSRSRTHRHAAAAARQGAGSGEQSPSTRSRHRQPAKSQAPGSTMNGTANGTVNGDVTGAADMEEERPAAGATMTTPMAPSTADGPAAPALSSSGEPEEAAPGSSTPQARAAVLALDALPPGWEQRELPNGRVYYVDHNNKTTTWERPLPPGWEKRVDPRGRYYYVDHNTRTTTWQRPTAEYVRNYEQWQSQRNQLQGAMQQFSQRFLYQSSGAPSDNDPLGPLPPGWEKRQDNGRVYYVNHNTRTTQWEDPRTQGMIQEPPLPPGWEMKYTNEGVRYFVDHNTRTTTFKDPRPGFESGSKQGGSPGAYDRSFRWKYHQFRFLCHSNALPSHVKISVSRQTLFEDSFQQIMNMKPYDLRRRLYIIMRGEEGLDYGGIAREWFFLLSHEVLNPMYCLFEYAGKNNYCLQINPASSINPDHLTYFRFIGRFIAMALYHGKFIDTGFTLPFYKRMLNKRPTLKDLESIDPEFYNSIVWTKENSLEECGLELYFIQDMEILGKVTTHELKEGGESIRVTEENKEEYIMLLTDWRFTRGVEEQTKAFLDGFNEVVPLEWLRYFDEKELELMLCGMQEIDMNDWQKNTIYRHYTKNSKQIQWFWQVVKEMDNEKRIRLLQFVTGTCRLPVGGFAELIGSNGPQKFCIDKVGKETWLPRSHTCFNRLDLPPYKSYEQLKEKLLYAIEETEGFGQE
SIO_010081: WWP2
subclass of: SO_0000673
so part of: WWP2
location: complement(join(1118784..1118883,1119087..1119159,1120021..1120117,1120277..1120381,1120713..1120833,1121344..1121484,1121600..1121733,1122601..1122760,1123888..1123976,1124057..1124128,1124242..1124320,1124659..1124787,1125237..1125318,1127087..1127141,1129467..1129641,1131072..1131161,1135403..1135610,1137729..1137868,1141311..1141407,1142356..1142493,1146308..1146426,1146661..1146808,1147365..1147434))
location: region:1118784-1147434:-1
so has part: feature:1147365-1147434:-1:exon
so has part: feature:1146661-1146808:-1:exon
so has part: feature:1146308-1146426:-1:exon
so has part: feature:1142356-1142493:-1:exon
so has part: feature:1141311-1141407:-1:exon
so has part: feature:1137729-1137868:-1:exon
so has part: feature:1135403-1135610:-1:exon
so has part: feature:1131072-1131161:-1:exon
so has part: feature:1129467-1129641:-1:exon
so has part: feature:1127087-1127141:-1:exon
so has part: feature:1125237-1125318:-1:exon
so has part: feature:1124659-1124787:-1:exon
so has part: feature:1124242-1124320:-1:exon
so has part: feature:1124057-1124128:-1:exon
so has part: feature:1123888-1123976:-1:exon
so has part: feature:1122601-1122760:-1:exon
so has part: feature:1121600-1121733:-1:exon
so has part: feature:1121344-1121484:-1:exon
so has part: feature:1120713-1120833:-1:exon
so has part: feature:1120277-1120381:-1:exon
so has part: feature:1120021-1120117:-1:exon
so has part: feature:1119087-1119159:-1:exon
so has part: feature:1118784-1118883:-1:exon

XP_038041296.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1147365-1147434:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1146661-1146808:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1146308-1146426:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1142356-1142493:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1141311-1141407:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1137729-1137868:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1135403-1135610:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1131072-1131161:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1129467-1129641:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1127087-1127141:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1125237-1125318:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1124659-1124787:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1124242-1124320:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1124057-1124128:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1123888-1123976:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1122601-1122760:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1121600-1121733:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:1121344-1121484:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:1120713-1120833:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:1120277-1120381:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:1120021-1120117:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:1119087-1119159:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:1118784-1118883:-1:exon

WWP2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8839
gene: WWP2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: NEDD4-like E3 ubiquitin-protein ligase WWP2 isoform X3
translation: MIQEPPLPPGWEMKYTNEGVRYFVDHNTRTTTFKDPRPGFESGSKQGGSPGAYDRSFRWKYHQFRFLCHSNALPSHVKISVSRQTLFEDSFQQIMNMKPYDLRRRLYIIMRGEEGLDYGGIAREWFFLLSHEVLNPMYCLFEYAGKNNYCLQINPASSINPDHLTYFRFIGRFIAMALYHGKFIDTGFTLPFYKRMLNKRPTLKDLESIDPEFYNSIVWTKENSLEECGLELYFIQDMEILGKVTTHELKEGGESIRVTEENKEEYIMLLTDWRFTRGVEEQTKAFLDGFNEVVPLEWLRYFDEKELELMLCGMQEIDMNDWQKNTIYRHYTKNSKQIQWFWQVVKEMDNEKRIRLLQFVTGTCRLPVGGFAELIGSNGPQKFCIDKVGKETWLPRSHTCFNRLDLPPYKSYEQLKEKLLYAIEETEGFGQE
SIO_010081: WWP2
subclass of: SO_0000673
so part of: WWP2
location: complement(join(1118784..1118883,1119087..1119159,1120021..1120117,1120277..1120381,1120713..1120833,1121344..1121484,1121600..1121733,1122601..1122760,1123888..1123976,1124057..1124128,1124242..1124320,1124659..1124786))
location: region:1118784-1124786:-1
so has part: feature:1124659-1124786:-1:exon
so has part: feature:1124242-1124320:-1:exon
so has part: feature:1124057-1124128:-1:exon
so has part: feature:1123888-1123976:-1:exon
so has part: feature:1122601-1122760:-1:exon
so has part: feature:1121600-1121733:-1:exon
so has part: feature:1121344-1121484:-1:exon
so has part: feature:1120713-1120833:-1:exon
so has part: feature:1120277-1120381:-1:exon
so has part: feature:1120021-1120117:-1:exon
so has part: feature:1119087-1119159:-1:exon
so has part: feature:1118784-1118883:-1:exon

XP_038041298.1
type: Protein
SIO_000068: ncbiprotein

position:1124786:-1
position: 1124786
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1124659-1124786:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1124242-1124320:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1124057-1124128:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1123888-1123976:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1122601-1122760:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1121600-1121733:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1121344-1121484:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1120713-1120833:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1120277-1120381:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1120021-1120117:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1119087-1119159:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1118784-1118883:-1:exon

NOB1
type: Gene
subclass of: SO_0000704
RO_0002162: 8839
gene: NOB1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1148998..1151749
location: region:1148998-1151749:1
so has part: feature:1148998-1151749:1:exon
subclass of: SO_0000010

101802692
type: Gene
SIO_000068: ncbigene

position:1148998:1
position: 1148998
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1151749:1
position: 1151749
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1148998-1151749:1:exon

NOB1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8839
gene: NOB1
product: NIN1 (RPN12) binding protein 1 homolog
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 112 samples with support for all annotated introns
transcript id: XM_038185597.1
SIO_010081: NOB1
subclass of: SO_0000673
so part of: NOB1
location: join(1148998..1149133,1149216..1149348,1149438..1149571,1149668..1149739,1149853..1149990,1150102..1150335,1150556..1150653,1150803..1150947,1151176..1151749)
location: region:1148998-1151749:1
so has part: feature:1148998-1149133:1:exon
so has part: feature:1149216-1149348:1:exon
so has part: feature:1149438-1149571:1:exon
so has part: feature:1149668-1149739:1:exon
so has part: feature:1149853-1149990:1:exon
so has part: feature:1150102-1150335:1:exon
so has part: feature:1150556-1150653:1:exon
so has part: feature:1150803-1150947:1:exon
so has part: feature:1151176-1151749:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1148998-1149133:1:exon

position:1149133:1
position: 1149133
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1149216-1149348:1:exon

position:1149216:1
position: 1149216
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1149348:1
position: 1149348
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1149438-1149571:1:exon

position:1149438:1
position: 1149438
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1149571:1
position: 1149571
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1149668-1149739:1:exon

position:1149668:1
position: 1149668
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1149739:1
position: 1149739
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1149853-1149990:1:exon

position:1149853:1
position: 1149853
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1149990:1
position: 1149990
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1150102-1150335:1:exon

position:1150102:1
position: 1150102
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1150335:1
position: 1150335
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1150556-1150653:1:exon

position:1150556:1
position: 1150556
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1150653:1
position: 1150653
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1150803-1150947:1:exon

position:1150803:1
position: 1150803
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1150947:1
position: 1150947
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:1151176-1151749:1:exon

position:1151176:1
position: 1151176
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

NOB1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8839
gene: NOB1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: RNA-binding protein NOB1
translation: MGRAEMARVPHVVADTGAFVCGAALQDVALSVYTVPEVLAEIRDRPTRRRLAALPYELRLRRPRAEFVRLVSDFAKRTGDFPSLSAADLQVLALTCQLHAECSGPAGLRLQPPDKVRLSSSLRHPEAPLHLAGFHLPSKHKCPGKGRRQHSPERSQDPTESNEFGSFLYWRPPLPSIEDELQELLEAHAVSVSPETTEEHRSPEDGDSAKEEEDEEDEDEEESDDEGWITPSNLKQVQQDLGHCDTAPADIQVGCVTTDFAMQNVLLQMGLHVLAVNGMLIRQARSHILRCHGCFKTTSDMTKVFCPHCGNKTLKKVAVSVSEDGSLHMHFSRNPKVLNPRGLRYPLPAPQGGKHANNPHLVEDQPFPQQRLSRKARQKTNVFDPDYIAGVSPFAENDIYSRAANLHIRDAALGAGRRRLNPNAVTKKFVKRR
SIO_010081: NOB1
subclass of: SO_0000673
so part of: NOB1
location: join(1149056..1149133,1149216..1149348,1149438..1149571,1149668..1149739,1149853..1149990,1150102..1150335,1150556..1150653,1150803..1150947,1151176..1151445)
location: region:1149056-1151445:1
so has part: feature:1149056-1149133:1:exon
so has part: feature:1149216-1149348:1:exon
so has part: feature:1149438-1149571:1:exon
so has part: feature:1149668-1149739:1:exon
so has part: feature:1149853-1149990:1:exon
so has part: feature:1150102-1150335:1:exon
so has part: feature:1150556-1150653:1:exon
so has part: feature:1150803-1150947:1:exon
so has part: feature:1151176-1151445:1:exon

XP_038041525.1
type: Protein
SIO_000068: ncbiprotein

position:1149056:1
position: 1149056
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1151445:1
position: 1151445
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1149056-1149133:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1149216-1149348:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1149438-1149571:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1149668-1149739:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1149853-1149990:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1150102-1150335:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1150556-1150653:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1150803-1150947:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1151176-1151445:1:exon

NQO1
type: Gene
subclass of: SO_0000704
RO_0002162: 8839
gene: NQO1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1152493..1154709
location: region:1152493-1154709:1
so has part: feature:1152493-1154709:1:exon
subclass of: SO_0000010

101802502
type: Gene
SIO_000068: ncbigene

position:1152493:1
position: 1152493
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1154709:1
position: 1154709
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1152493-1154709:1:exon

NQO1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8839
gene: NQO1
product: NAD(P)H quinone dehydrogenase 1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 48 samples with support for all annotated introns
transcript id: XM_027466610.2
SIO_010081: NQO1
subclass of: SO_0000673
so part of: NQO1
location: join(1152493..1152648,1153122..1153286,1153361..1153491,1153637..1153750,1153855..1153956,1154044..1154709)
location: region:1152493-1154709:1
so has part: feature:1152493-1152648:1:exon
so has part: feature:1153122-1153286:1:exon
so has part: feature:1153361-1153491:1:exon
so has part: feature:1153637-1153750:1:exon
so has part: feature:1153855-1153956:1:exon
so has part: feature:1154044-1154709:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1152493-1152648:1:exon

position:1152648:1
position: 1152648
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1153122-1153286:1:exon

position:1153122:1
position: 1153122
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1153286:1
position: 1153286
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1153361-1153491:1:exon

position:1153361:1
position: 1153361
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1153491:1
position: 1153491
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1153637-1153750:1:exon

position:1153637:1
position: 1153637
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1153750:1
position: 1153750
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1153855-1153956:1:exon

position:1153855:1
position: 1153855
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1153956:1
position: 1153956
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1154044-1154709:1:exon

position:1154044:1
position: 1154044
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

NQO1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8839
gene: NQO1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: NAD(P)H dehydrogenase [quinone] 1
translation: MAGRKALIVLAHSEKTSFNHAMAEAAASTLRAKGWDVTISDLYAMGFNPVLSRHDITGPPKNPEHFVYETEMGEAWKEGRLSSDIVAEQKKIEAADLIIFQFPLQWLGMPAILKGWFDRVIIQGFAYSVATIYEQGPFQKKKAMLSFTTSGMESTYSPKGINGDMNVFLWPMQRGMLQFCGFQVLAPQICYSVRYVTPEARAQMLSAWQKRLATIWEEKPLSIVPNSCFEMSMERGFVLKQEVLAQQEGKKQGLTVGQHLGKAFPPNQQLKAP
SIO_010081: NQO1
subclass of: SO_0000673
so part of: NQO1
location: join(1152642..1152648,1153122..1153286,1153361..1153491,1153637..1153750,1153855..1153956,1154044..1154346)
location: region:1152642-1154346:1
so has part: feature:1152642-1152648:1:exon
so has part: feature:1153122-1153286:1:exon
so has part: feature:1153361-1153491:1:exon
so has part: feature:1153637-1153750:1:exon
so has part: feature:1153855-1153956:1:exon
so has part: feature:1154044-1154346:1:exon

XP_027322411.2
type: Protein
SIO_000068: ncbiprotein

position:1152642:1
position: 1152642
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1154346:1
position: 1154346
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1152642-1152648:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1153122-1153286:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1153361-1153491:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1153637-1153750:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1153855-1153956:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1154044-1154346:1:exon

NFAT5
type: Gene
subclass of: SO_0000704
RO_0002162: 8839
gene: NFAT5
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1156225..1211658)
location: region:1156225-1211658:-1
so has part: feature:1156225-1211658:-1:exon
subclass of: SO_0000010

101800130
type: Gene
SIO_000068: ncbigene

position:1156225:-1
position: 1156225
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1211658:-1
position: 1211658
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1156225-1211658:-1:exon

NFAT5
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8839
gene: NFAT5
product: nuclear factor of activated T cells 5, transcript variant X5
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 107 samples with support for all annotated introns
transcript id: XM_038185656.1
SIO_010081: NFAT5
subclass of: SO_0000673
so part of: NFAT5
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urn:…
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NFAT5
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8839
gene: NFAT5
product: nuclear factor of activated T cells 5, transcript variant X6
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 30 samples with support for all annotated introns
transcript id: XM_038185657.1
SIO_010081: NFAT5
subclass of: SO_0000673
so part of: NFAT5
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location: region:1156225-1211658:-1
so has part: feature:1211520-1211658:-1:exon
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urn:…
SIO_000300: 1
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urn:…
SIO_000300: 2
SIO_000628: feature:1196187-1196312:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1189733-1189845:-1:exon

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reference: sequence
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reference: sequence
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urn:…
SIO_000300: 4
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SIO_000300: 5
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SIO_000628: feature:1164122-1164364:-1:exon

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SIO_000300: 16
SIO_000628: feature:1156225-1163271:-1:exon

NFAT5
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8839
gene: NFAT5
product: nuclear factor of activated T cells 5, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 104 samples with support for all annotated introns
transcript id: XM_038185655.1
SIO_010081: NFAT5
subclass of: SO_0000673
so part of: NFAT5
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location: region:1156225-1211652:-1
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so has part: feature:1156225-1163271:-1:exon

position:1211652:-1
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reference: sequence
type: ReverseStrandPosition
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urn:…
SIO_000300: 1
SIO_000628: feature:1211520-1211652:-1:exon

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SIO_000300: 2
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SIO_000300: 3
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SIO_000300: 10
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SIO_000300: 11
SIO_000628: feature:1168316-1168464:-1:exon

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SIO_000300: 12
SIO_000628: feature:1165367-1167791:-1:exon

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SIO_000300: 14
SIO_000628: feature:1156225-1163271:-1:exon

NFAT5
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8839
gene: NFAT5
product: nuclear factor of activated T cells 5, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 47 samples with support for all annotated introns
transcript id: XM_038185654.1
SIO_010081: NFAT5
subclass of: SO_0000673
so part of: NFAT5
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location: region:1156225-1199478:-1
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position:1199478:-1
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urn:…
SIO_000300: 1
SIO_000628: feature:1199397-1199478:-1:exon

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reference: sequence
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urn:…
SIO_000300: 2
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SIO_000300: 10
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urn:…
SIO_000300: 11
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NFAT5
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8839
gene: NFAT5
product: nuclear factor of activated T cells 5, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 55 samples with support for all annotated introns
transcript id: XM_013105349.4
SIO_010081: NFAT5
subclass of: SO_0000673
so part of: NFAT5
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location: region:1156225-1199478:-1
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urn:…
SIO_000300: 1
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SIO_000300: 13
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position:1164127:-1
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urn:…
SIO_000300: 14
SIO_000628: feature:1156225-1163271:-1:exon

NFAT5
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8839
gene: NFAT5
product: nuclear factor of activated T cells 5, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 47 samples with support for all annotated introns
transcript id: XM_038185653.1
SIO_010081: NFAT5
subclass of: SO_0000673
so part of: NFAT5
location: complement(join(1156225..1163271,1164122..1164364,1165367..1167791,1168316..1168464,1171352..1171432,1172040..1172172,1174170..1174222,1174393..1174527,1175822..1175994,1177203..1177393,1178968..1179160,1183664..1184222,1196187..1196312,1199397..1199478))
location: region:1156225-1199478:-1
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urn:…
SIO_000300: 1
SIO_000628: feature:1199397-1199478:-1:exon

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SIO_000300: 2
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SIO_000300: 3
SIO_000628: feature:1183664-1184222:-1:exon

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SIO_000300: 4
SIO_000628: feature:1178968-1179160:-1:exon

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SIO_000300: 5
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urn:…
SIO_000300: 6
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urn:…
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SIO_000628: feature:1171352-1171432:-1:exon

urn:…
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SIO_000628: feature:1168316-1168464:-1:exon

urn:…
SIO_000300: 12
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urn:…
SIO_000300: 13
SIO_000628: feature:1164122-1164364:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1156225-1163271:-1:exon

NFAT5
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8839
gene: NFAT5
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: nuclear factor of activated T-cells 5 isoform X2
translation: MAPESVYDLLPKELQLPPSRETSVASMSQTSGGEAGSPPPAVVAADASSAPSSSSMGGACSSFTTSSSPTIYSTSVTDSKAMQVESCSSAVGVSNRGVSEKQLTSNTVQQQQSTPKRHTVLYISPPPEDLLDNSRMSCQDEGCGLESEQSCSMWMEDSPSNFSNMSTSSYNDNTEVPRKSRKRNPKQRPGIKRRDCEESNMDIFDADSAKAPHYVLSQLSTDSKGNSKAGNGAPESQKGAGGKKTPMLCGQYPTKSEGKELKIVVQPETQHRARYLTEGSRGSVKDRTQQGFPTVKLEGHNEPVVLQVFVGNDSGRVKPHGFYQACRVTGRNTTPCKEVDIEGTTVIEVGLDPSNNMTLAVDCVGILKLRNADVEARIGIAGSKKKSTRARLVFRVNITRKDGSTLTLQTPSSPILCTQPAGVPEILKKSLHSCSVKGEEEVFLIGKNFLKGTKVIFQENVSDENSWKAEAEIDMELFHQNHLIVKVPPYHDQQITSAVSVGIYVVTNAGRSHDVQPFTYTPDTSAGTLNVKVKKEISSPAQHCSFEEAIKAVNATSCNPENVNILPSALITPLIPSSMIKNEDVAPMEVSAEKRSPPVFKASKVVGPTQQTLESSMSGIPTSASHLPSESEKQQQIQPKVYNPETLTTIQTQDISQPGSFSAVSTPGQLQNSDTLLQQAAQFQTRDSQTREVLQSDGTVVTLSQLTDGSQTQQSTLSEPAQALQQQISSSIFSSASGVSQLQNTIQQLQAGNFPTNTATGSNRNVDLVQQVLEAQQQLSSVLFSGSESNEDVQDQLNADIFQQVSQIQNPGIFSSSETAVHSRPENLLPGRGENVHSQPENALSNQQQQQQQQQQAMETSAAMVIGIQQNICQAATQMQSDLFSSTTSGNGALQQSPVYQQASHIMSGLSTSEDMQMQCELFSSSPGVSGSETTPTAQQQVSNNGPNMFQASSSADGEEASGQSKQIQNSVFQTMVQMQHSGESQPQVNLFSSTKNMMSVQASGAQQQGGGLFQQGGEIMSIQPANFMQQSAHSQAQLFHSQNPIGDTQNMPQETQGSIFHSPNSIVHNQTSTNSSDQLQPPMFHSQSTMGVLQSSSVPQDQQSANMFLSQSSISNPASQEEQMSFFTSPNSISPLQAATNTEQPTSFQQQTQISHIQSSMLPQEQPQTQPAQQGLFQPQVSMGSIQSSSIPQNQQGAIFQPQHSIVAIQSSPPSQEQPQQQQQNMMFSNQSAMSTIASQKQNMIFNPNQNPVTNQEQQGQSIFHPQTNMAPMNQEQQPMQFQSQTTVSSLQNPGSNQAEAQQPAIFHNSPQIQLVQGSPSSQEQQVTLFISSASMSALQNSMSQQELQQSPMFSSQNSMAGMQGTASPPQQQASLFHNAAGGAINQLQNSPASSQQTSGIFLFGIQNNCGQLLPSGPAALPDELMAISQPGQPQGEGQAAVPTLLSQQLPETSPLPSAMAPNQNIEKIDDLLVSLQNQGNNMAGSF
SIO_010081: NFAT5
subclass of: SO_0000673
so part of: NFAT5
location: complement(join(1163271,1164127..1164364,1165367..1167791,1168316..1168464,1171352..1171432,1172040..1172172,1174170..1174222,1174393..1174527,1175822..1175994,1177203..1177393,1178968..1179160,1183664..1184222,1196187..1196312,1199397..1199406))
location: region:1163271-1199406:-1
so has part: feature:1199397-1199406:-1:exon
so has part: feature:1196187-1196312:-1:exon
so has part: feature:1183664-1184222:-1:exon
so has part: feature:1178968-1179160:-1:exon
so has part: feature:1177203-1177393:-1:exon
so has part: feature:1175822-1175994:-1:exon
so has part: feature:1174393-1174527:-1:exon
so has part: feature:1174170-1174222:-1:exon
so has part: feature:1172040-1172172:-1:exon
so has part: feature:1171352-1171432:-1:exon
so has part: feature:1168316-1168464:-1:exon
so has part: feature:1165367-1167791:-1:exon
so has part: feature:1164127-1164364:-1:exon
so has part: feature:1163271-1163271:-1:exon

XP_012960803.3
type: Protein
SIO_000068: ncbiprotein

position:1199406:-1
position: 1199406
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1199397-1199406:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1196187-1196312:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1183664-1184222:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1178968-1179160:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1177203-1177393:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1175822-1175994:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1174393-1174527:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1174170-1174222:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1172040-1172172:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1171352-1171432:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1168316-1168464:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1165367-1167791:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1164127-1164364:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1163271-1163271:-1:exon

NFAT5
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8839
gene: NFAT5
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: nuclear factor of activated T-cells 5 isoform X4
translation: MPSDFISLLSADLDLESPKSLYSKESVYDLLPKELQLPPSRETSVASMSQTSGGEAGSPPPAVVAADASSAPSSSSMGGACSSFTTSSSPTIYSTSVTDSKAMQVESCSSAVGVSNRGVSEKQLTSNTVQQQQSTPKRHTVLYISPPPEDLLDNSRMSCQDEGCGLESEQSCSMWMEDSPSNFSNMSTSSYNDNTEVPRKSRKRNPKQRPGIKRRDCEESNMDIFDADSAKAPHYVLSQLSTDSKGNSKAGNGAPESQKGAGGKKTPMLCGQYPTKSEGKELKIVVQPETQHRARYLTEGSRGSVKDRTQQGFPTVKLEGHNEPVVLQVFVGNDSGRVKPHGFYQACRVTGRNTTPCKEVDIEGTTVIEVGLDPSNNMTLAVDCVGILKLRNADVEARIGIAGSKKKSTRARLVFRVNITRKDGSTLTLQTPSSPILCTQPAGVPEILKKSLHSCSVKGEEEVFLIGKNFLKGTKVIFQENVSDENSWKAEAEIDMELFHQNHLIVKVPPYHDQQITSAVSVGIYVVTNAGRSHDVQPFTYTPDTSAGTLNVKVKKEISSPAQHCSFEEAIKAVNATSCNPENVNILPSALITPLIPSSMIKNEDVAPMEVSAEKRSPPVFKASKVVGPTQQTLESSMSGIPTSASHLPSESEKQQQIQPKVYNPETLTTIQTQDISQPGSFSAVSTPGQLQNSDTLLQQAAQFQTRDSQTREVLQSDGTVVTLSQLTDGSQTQQSTLSEPAQALQQQISSSIFSSASGVSQLQNTIQQLQAGNFPTNTATGSNRNVDLVQQVLEAQQQLSSVLFSGSESNEDVQDQLNADIFQQVSQIQNPGIFSSSETAVHSRPENLLPGRGENVHSQPENALSNQQQQQQQQQQAMETSAAMVIGIQQNICQAATQMQSDLFSSTTSGNGALQQSPVYQQASHIMSGLSTSEDMQMQCELFSSSPGVSGSETTPTAQQQVSNNGPNMFQASSSADGEEASGQSKQIQNSVFQTMVQMQHSGESQPQVNLFSSTKNMMSVQASGAQQQGGGLFQQGGEIMSIQPANFMQQSAHSQAQLFHSQNPIGDTQNMPQETQGSIFHSPNSIVHNQTSTNSSDQLQPPMFHSQSTMGVLQSSSVPQDQQSANMFLSQSSISNPASQEEQMSFFTSPNSISPLQAATNTEQPTSFQQQTQISHIQSSMLPQEQPQTQPAQQGLFQPQVSMGSIQSSSIPQNQQGAIFQPQHSIVAIQSSPPSQEQPQQQQQNMMFSNQSAMSTIASQKQNMIFNPNQNPVTNQEQQGQSIFHPQTNMAPMNQEQQPMQFQSQTTVSSLQNPGSNQAEAQQPAIFHNSPQIQLVQGSPSSQEQQVTLFISSASMSALQNSMSQQELQQSPMFSSQNSMAGMQGTASPPQQQASLFHNAAGGAINQLQNSPASSQQTSGIFLFGIQNNCGQLLPSGPAALPDELMAISQPGQPQGEGQAAVPTLLSQQLPETSPLPSAMAPNQNIEKIDDLLVSLQNQGNNMAGSF
SIO_010081: NFAT5
subclass of: SO_0000673
so part of: NFAT5
location: complement(join(1164126..1164364,1165367..1167791,1168316..1168464,1171352..1171432,1172040..1172172,1174170..1174222,1174393..1174527,1175822..1175994,1177203..1177393,1178968..1179160,1183664..1184222,1196187..1196312,1211520..1211592))
location: region:1164126-1211592:-1
so has part: feature:1211520-1211592:-1:exon
so has part: feature:1196187-1196312:-1:exon
so has part: feature:1183664-1184222:-1:exon
so has part: feature:1178968-1179160:-1:exon
so has part: feature:1177203-1177393:-1:exon
so has part: feature:1175822-1175994:-1:exon
so has part: feature:1174393-1174527:-1:exon
so has part: feature:1174170-1174222:-1:exon
so has part: feature:1172040-1172172:-1:exon
so has part: feature:1171352-1171432:-1:exon
so has part: feature:1168316-1168464:-1:exon
so has part: feature:1165367-1167791:-1:exon
so has part: feature:1164126-1164364:-1:exon

XP_038041583.1
type: Protein
SIO_000068: ncbiprotein

position:1164126:-1
position: 1164126
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1211592:-1
position: 1211592
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1211520-1211592:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1196187-1196312:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1183664-1184222:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1178968-1179160:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1177203-1177393:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1175822-1175994:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1174393-1174527:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1174170-1174222:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1172040-1172172:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1171352-1171432:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1168316-1168464:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1165367-1167791:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1164126-1164364:-1:exon

NFAT5
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8839
gene: NFAT5
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: nuclear factor of activated T-cells 5 isoform X3
translation: MAPESVYDLLPKELQLPPSRETSVASMSQTSGGEAGSPPPAVVAADASSAPSSSSMGGACSSFTTSSSPTIYSTSVTDSKAMQVESCSSAVGVSNRGVSEKQLTSNTVQQQQSTPKRHTVLYISPPPEDLLDNSRMSCQDEGCGLESEQSCSMWMEDSPSNFSNMSTSSYNDNTEVPRKSRKRNPKQRPGIKRRDCEESNMDIFDADSAKAPHYVLSQLSTDSKGNSKAGNGAPESQKGAGGKKTPMLCGQYPTKSEGKELKIVVQPETQHRARYLTEGSRGSVKDRTQQGFPTVKLEGHNEPVVLQVFVGNDSGRVKPHGFYQACRVTGRNTTPCKEVDIEGTTVIEVGLDPSNNMTLAVDCVGILKLRNADVEARIGIAGSKKKSTRARLVFRVNITRKDGSTLTLQTPSSPILCTQPAGVPEILKKSLHSCSVKGEEEVFLIGKNFLKGTKVIFQENVSDENSWKAEAEIDMELFHQNHLIVKVPPYHDQQITSAVSVGIYVVTNAGRSHDVQPFTYTPDTSGTLNVKVKKEISSPAQHCSFEEAIKAVNATSCNPENVNILPSALITPLIPSSMIKNEDVAPMEVSAEKRSPPVFKASKVVGPTQQTLESSMSGIPTSASHLPSESEKQQQIQPKVYNPETLTTIQTQDISQPGSFSAVSTPGQLQNSDTLLQQAAQFQTRDSQTREVLQSDGTVVTLSQLTDGSQTQQSTLSEPAQALQQQISSSIFSSASGVSQLQNTIQQLQAGNFPTNTATGSNRNVDLVQQVLEAQQQLSSVLFSGSESNEDVQDQLNADIFQQVSQIQNPGIFSSSETAVHSRPENLLPGRGENVHSQPENALSNQQQQQQQQQQAMETSAAMVIGIQQNICQAATQMQSDLFSSTTSGNGALQQSPVYQQASHIMSGLSTSEDMQMQCELFSSSPGVSGSETTPTAQQQVSNNGPNMFQASSSADGEEASGQSKQIQNSVFQTMVQMQHSGESQPQVNLFSSTKNMMSVQASGAQQQGGGLFQQGGEIMSIQPANFMQQSAHSQAQLFHSQNPIGDTQNMPQETQGSIFHSPNSIVHNQTSTNSSDQLQPPMFHSQSTMGVLQSSSVPQDQQSANMFLSQSSISNPASQEEQMSFFTSPNSISPLQAATNTEQPTSFQQQTQISHIQSSMLPQEQPQTQPAQQGLFQPQVSMGSIQSSSIPQNQQGAIFQPQHSIVAIQSSPPSQEQPQQQQQNMMFSNQSAMSTIASQKQNMIFNPNQNPVTNQEQQGQSIFHPQTNMAPMNQEQQPMQFQSQTTVSSLQNPGSNQAEAQQPAIFHNSPQIQLVQGSPSSQEQQVTLFISSASMSALQNSMSQQELQQSPMFSSQNSMAGMQGTASPPQQQASLFHNAAGGAINQLQNSPASSQQTSGIFLFGIQNNCGQLLPSGPAALPDELMAISQPGQPQGEGQAAVPTLLSQQLPETSPLPSAMAPNQNIEKIDDLLVSLQNQGNNMAGSF
SIO_010081: NFAT5
subclass of: SO_0000673
so part of: NFAT5
location: complement(join(1164126..1164364,1165367..1167791,1168316..1168464,1171352..1171429,1172040..1172172,1174170..1174222,1174393..1174527,1175822..1175994,1177203..1177393,1178968..1179160,1183664..1184222,1196187..1196312,1199397..1199406))
location: region:1164126-1199406:-1
so has part: feature:1199397-1199406:-1:exon
so has part: feature:1196187-1196312:-1:exon
so has part: feature:1183664-1184222:-1:exon
so has part: feature:1178968-1179160:-1:exon
so has part: feature:1177203-1177393:-1:exon
so has part: feature:1175822-1175994:-1:exon
so has part: feature:1174393-1174527:-1:exon
so has part: feature:1174170-1174222:-1:exon
so has part: feature:1172040-1172172:-1:exon
so has part: feature:1171352-1171429:-1:exon
so has part: feature:1168316-1168464:-1:exon
so has part: feature:1165367-1167791:-1:exon
so has part: feature:1164126-1164364:-1:exon

XP_038041582.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1199397-1199406:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1196187-1196312:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1183664-1184222:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1178968-1179160:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1177203-1177393:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1175822-1175994:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1174393-1174527:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1174170-1174222:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1172040-1172172:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1171352-1171429:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1168316-1168464:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1165367-1167791:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1164126-1164364:-1:exon

NFAT5
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8839
gene: NFAT5
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: nuclear factor of activated T-cells 5 isoform X1
translation: MAPESVYDLLPKELQLPPSRETSVASMSQTSGGEAGSPPPAVVAADASSAPSSSSMGGACSSFTTSSSPTIYSTSVTDSKAMQVESCSSAVGVSNRGVSEKQLTSNTVQQQQSTPKRHTVLYISPPPEDLLDNSRMSCQDEGCGLESEQSCSMWMEDSPSNFSNMSTSSYNDNTEVPRKSRKRNPKQRPGIKRRDCEESNMDIFDADSAKAPHYVLSQLSTDSKGNSKAGNGAPESQKGAGGKKTPMLCGQYPTKSEGKELKIVVQPETQHRARYLTEGSRGSVKDRTQQGFPTVKLEGHNEPVVLQVFVGNDSGRVKPHGFYQACRVTGRNTTPCKEVDIEGTTVIEVGLDPSNNMTLAVDCVGILKLRNADVEARIGIAGSKKKSTRARLVFRVNITRKDGSTLTLQTPSSPILCTQPAGVPEILKKSLHSCSVKGEEEVFLIGKNFLKGTKVIFQENVSDENSWKAEAEIDMELFHQNHLIVKVPPYHDQQITSAVSVGIYVVTNAGRSHDVQPFTYTPDTSAGTLNVKVKKEISSPAQHCSFEEAIKAVNATSCNPENVNILPSALITPLIPSSMIKNEDVAPMEVSAEKRSPPVFKASKVVGPTQQTLESSMSGIPTSASHLPSESEKQQQIQPKVYNPETLTTIQTQDISQPGSFSAVSTPGQLQNSDTLLQQAAQFQTRDSQTREVLQSDGTVVTLSQLTDGSQTQQSTLSEPAQALQQQISSSIFSSASGVSQLQNTIQQLQAGNFPTNTATGSNRNVDLVQQVLEAQQQLSSVLFSGSESNEDVQDQLNADIFQQVSQIQNPGIFSSSETAVHSRPENLLPGRGENVHSQPENALSNQQQQQQQQQQAMETSAAMVIGIQQNICQAATQMQSDLFSSTTSGNGALQQSPVYQQASHIMSGLSTSEDMQMQCELFSSSPGVSGSETTPTAQQQVSNNGPNMFQASSSADGEEASGQSKQIQNSVFQTMVQMQHSGESQPQVNLFSSTKNMMSVQASGAQQQGGGLFQQGGEIMSIQPANFMQQSAHSQAQLFHSQNPIGDTQNMPQETQGSIFHSPNSIVHNQTSTNSSDQLQPPMFHSQSTMGVLQSSSVPQDQQSANMFLSQSSISNPASQEEQMSFFTSPNSISPLQAATNTEQPTSFQQQTQISHIQSSMLPQEQPQTQPAQQGLFQPQVSMGSIQSSSIPQNQQGAIFQPQHSIVAIQSSPPSQEQPQQQQQNMMFSNQSAMSTIASQKQNMIFNPNQNPVTNQEQQGQSIFHPQTNMAPMNQEQQPMQFQSQTTVSSLQNPGSNQAEAQQPAIFHNSPQIQLVQGSPSSQEQQVTLFISSASMSALQNSMSQQELQQSPMFSSQNSMAGMQGTASPPQQQASLFHNAAGGAINQLQNSPASSQQTSGIFLFGIQNNCGQLLPSGPAALPDELMAISQPGQPQGEGQAAVPTLLSQQLPETSPLPSAMAPNQNIEKIDDLLVSLQNQGNNMAGSF
SIO_010081: NFAT5
subclass of: SO_0000673
so part of: NFAT5
location: complement(join(1164126..1164364,1165367..1167791,1168316..1168464,1171352..1171432,1172040..1172172,1174170..1174222,1174393..1174527,1175822..1175994,1177203..1177393,1178968..1179160,1183664..1184222,1196187..1196312,1199397..1199406))
location: region:1164126-1199406:-1
so has part: feature:1199397-1199406:-1:exon
so has part: feature:1196187-1196312:-1:exon
so has part: feature:1183664-1184222:-1:exon
so has part: feature:1178968-1179160:-1:exon
so has part: feature:1177203-1177393:-1:exon
so has part: feature:1175822-1175994:-1:exon
so has part: feature:1174393-1174527:-1:exon
so has part: feature:1174170-1174222:-1:exon
so has part: feature:1172040-1172172:-1:exon
so has part: feature:1171352-1171432:-1:exon
so has part: feature:1168316-1168464:-1:exon
so has part: feature:1165367-1167791:-1:exon
so has part: feature:1164126-1164364:-1:exon

XP_038041581.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1199397-1199406:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1196187-1196312:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1183664-1184222:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1178968-1179160:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1177203-1177393:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1175822-1175994:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1174393-1174527:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1174170-1174222:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1172040-1172172:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1171352-1171432:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1168316-1168464:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1165367-1167791:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1164126-1164364:-1:exon

NFAT5
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8839
gene: NFAT5
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: nuclear factor of activated T-cells 5 isoform X5
translation: MGGACSSFTTSSSPTIYSTSVTDSKAMQVESCSSAVGVSNRGVSEKQLTSNTVQQQQSTPKRHTVLYISPPPEDLLDNSRMSCQDEGCGLESEQSCSMWMEDSPSNFSNMSTSSYNDNTEVPRKSRKRNPKQRPGIKRRDCEESNMDIFDADSAKAPHYVLSQLSTDSKGNSKAGNGAPESQKGAGGKKTPMLCGQYPTKSEGKELKIVVQPETQHRARYLTEGSRGSVKDRTQQGFPTVKLEGHNEPVVLQVFVGNDSGRVKPHGFYQACRVTGRNTTPCKEVDIEGTTVIEVGLDPSNNMTLAVDCVGILKLRNADVEARIGIAGSKKKSTRARLVFRVNITRKDGSTLTLQTPSSPILCTQPAGVPEILKKSLHSCSVKGEEEVFLIGKNFLKGTKVIFQENVSDENSWKAEAEIDMELFHQNHLIVKVPPYHDQQITSAVSVGIYVVTNAGRSHDVQPFTYTPDTSAGTLNVKVKKEISSPAQHCSFEEAIKAVNATSCNPENVNILPSALITPLIPSSMIKNEDVAPMEVSAEKRSPPVFKASKVVGPTQQTLESSMSGIPTSASHLPSESEKQQQIQPKVYNPETLTTIQTQDISQPGSFSAVSTPGQLQNSDTLLQQAAQFQTRDSQTREVLQSDGTVVTLSQLTDGSQTQQSTLSEPAQALQQQISSSIFSSASGVSQLQNTIQQLQAGNFPTNTATGSNRNVDLVQQVLEAQQQLSSVLFSGSESNEDVQDQLNADIFQQVSQIQNPGIFSSSETAVHSRPENLLPGRGENVHSQPENALSNQQQQQQQQQQAMETSAAMVIGIQQNICQAATQMQSDLFSSTTSGNGALQQSPVYQQASHIMSGLSTSEDMQMQCELFSSSPGVSGSETTPTAQQQVSNNGPNMFQASSSADGEEASGQSKQIQNSVFQTMVQMQHSGESQPQVNLFSSTKNMMSVQASGAQQQGGGLFQQGGEIMSIQPANFMQQSAHSQAQLFHSQNPIGDTQNMPQETQGSIFHSPNSIVHNQTSTNSSDQLQPPMFHSQSTMGVLQSSSVPQDQQSANMFLSQSSISNPASQEEQMSFFTSPNSISPLQAATNTEQPTSFQQQTQISHIQSSMLPQEQPQTQPAQQGLFQPQVSMGSIQSSSIPQNQQGAIFQPQHSIVAIQSSPPSQEQPQQQQQNMMFSNQSAMSTIASQKQNMIFNPNQNPVTNQEQQGQSIFHPQTNMAPMNQEQQPMQFQSQTTVSSLQNPGSNQAEAQQPAIFHNSPQIQLVQGSPSSQEQQVTLFISSASMSALQNSMSQQELQQSPMFSSQNSMAGMQGTASPPQQQASLFHNAAGGAINQLQNSPASSQQTSGIFLFGIQNNCGQLLPSGPAALPDELMAISQPGQPQGEGQAAVPTLLSQQLPETSPLPSAMAPNQNIEKIDDLLVSLQNQGNNMAGSF
SIO_010081: NFAT5
subclass of: SO_0000673
so part of: NFAT5
location: complement(join(1164126..1164364,1165367..1167791,1168316..1168464,1171352..1171432,1172040..1172172,1174170..1174222,1174393..1174527,1175822..1175994,1177203..1177393,1178968..1179160,1183664..1184193))
location: region:1164126-1184193:-1
so has part: feature:1183664-1184193:-1:exon
so has part: feature:1178968-1179160:-1:exon
so has part: feature:1177203-1177393:-1:exon
so has part: feature:1175822-1175994:-1:exon
so has part: feature:1174393-1174527:-1:exon
so has part: feature:1174170-1174222:-1:exon
so has part: feature:1172040-1172172:-1:exon
so has part: feature:1171352-1171432:-1:exon
so has part: feature:1168316-1168464:-1:exon
so has part: feature:1165367-1167791:-1:exon
so has part: feature:1164126-1164364:-1:exon

XP_038041584.1
type: Protein
SIO_000068: ncbiprotein

position:1184193:-1
position: 1184193
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1183664-1184193:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1178968-1179160:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1177203-1177393:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1175822-1175994:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1174393-1174527:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1174170-1174222:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1172040-1172172:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1171352-1171432:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1168316-1168464:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1165367-1167791:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1164126-1164364:-1:exon

NFAT5
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8839
gene: NFAT5
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: nuclear factor of activated T-cells 5 isoform X5
translation: MGGACSSFTTSSSPTIYSTSVTDSKAMQVESCSSAVGVSNRGVSEKQLTSNTVQQQQSTPKRHTVLYISPPPEDLLDNSRMSCQDEGCGLESEQSCSMWMEDSPSNFSNMSTSSYNDNTEVPRKSRKRNPKQRPGIKRRDCEESNMDIFDADSAKAPHYVLSQLSTDSKGNSKAGNGAPESQKGAGGKKTPMLCGQYPTKSEGKELKIVVQPETQHRARYLTEGSRGSVKDRTQQGFPTVKLEGHNEPVVLQVFVGNDSGRVKPHGFYQACRVTGRNTTPCKEVDIEGTTVIEVGLDPSNNMTLAVDCVGILKLRNADVEARIGIAGSKKKSTRARLVFRVNITRKDGSTLTLQTPSSPILCTQPAGVPEILKKSLHSCSVKGEEEVFLIGKNFLKGTKVIFQENVSDENSWKAEAEIDMELFHQNHLIVKVPPYHDQQITSAVSVGIYVVTNAGRSHDVQPFTYTPDTSAGTLNVKVKKEISSPAQHCSFEEAIKAVNATSCNPENVNILPSALITPLIPSSMIKNEDVAPMEVSAEKRSPPVFKASKVVGPTQQTLESSMSGIPTSASHLPSESEKQQQIQPKVYNPETLTTIQTQDISQPGSFSAVSTPGQLQNSDTLLQQAAQFQTRDSQTREVLQSDGTVVTLSQLTDGSQTQQSTLSEPAQALQQQISSSIFSSASGVSQLQNTIQQLQAGNFPTNTATGSNRNVDLVQQVLEAQQQLSSVLFSGSESNEDVQDQLNADIFQQVSQIQNPGIFSSSETAVHSRPENLLPGRGENVHSQPENALSNQQQQQQQQQQAMETSAAMVIGIQQNICQAATQMQSDLFSSTTSGNGALQQSPVYQQASHIMSGLSTSEDMQMQCELFSSSPGVSGSETTPTAQQQVSNNGPNMFQASSSADGEEASGQSKQIQNSVFQTMVQMQHSGESQPQVNLFSSTKNMMSVQASGAQQQGGGLFQQGGEIMSIQPANFMQQSAHSQAQLFHSQNPIGDTQNMPQETQGSIFHSPNSIVHNQTSTNSSDQLQPPMFHSQSTMGVLQSSSVPQDQQSANMFLSQSSISNPASQEEQMSFFTSPNSISPLQAATNTEQPTSFQQQTQISHIQSSMLPQEQPQTQPAQQGLFQPQVSMGSIQSSSIPQNQQGAIFQPQHSIVAIQSSPPSQEQPQQQQQNMMFSNQSAMSTIASQKQNMIFNPNQNPVTNQEQQGQSIFHPQTNMAPMNQEQQPMQFQSQTTVSSLQNPGSNQAEAQQPAIFHNSPQIQLVQGSPSSQEQQVTLFISSASMSALQNSMSQQELQQSPMFSSQNSMAGMQGTASPPQQQASLFHNAAGGAINQLQNSPASSQQTSGIFLFGIQNNCGQLLPSGPAALPDELMAISQPGQPQGEGQAAVPTLLSQQLPETSPLPSAMAPNQNIEKIDDLLVSLQNQGNNMAGSF
SIO_010081: NFAT5
subclass of: SO_0000673
so part of: NFAT5
location: complement(join(1164126..1164364,1165367..1167791,1168316..1168464,1171352..1171432,1172040..1172172,1174170..1174222,1174393..1174527,1175822..1175994,1177203..1177393,1178968..1179160,1183664..1184193))
location: region:1164126-1184193:-1
so has part: feature:1183664-1184193:-1:exon
so has part: feature:1178968-1179160:-1:exon
so has part: feature:1177203-1177393:-1:exon
so has part: feature:1175822-1175994:-1:exon
so has part: feature:1174393-1174527:-1:exon
so has part: feature:1174170-1174222:-1:exon
so has part: feature:1172040-1172172:-1:exon
so has part: feature:1171352-1171432:-1:exon
so has part: feature:1168316-1168464:-1:exon
so has part: feature:1165367-1167791:-1:exon
so has part: feature:1164126-1164364:-1:exon

XP_038041585.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1183664-1184193:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1178968-1179160:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1177203-1177393:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1175822-1175994:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1174393-1174527:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1174170-1174222:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1172040-1172172:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1171352-1171432:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1168316-1168464:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1165367-1167791:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1164126-1164364:-1:exon

LOC101802322
type: Gene
subclass of: SO_0000704
RO_0002162: 8839
gene: LOC101802322
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1219416..1229256)
location: region:1219416-1229256:-1
so has part: feature:1219416-1229256:-1:exon
subclass of: SO_0000010

101802322
type: Gene
SIO_000068: ncbigene

position:1219416:-1
position: 1219416
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1229256:-1
position: 1229256
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1219416-1229256:-1:exon

LOC101802322
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8839
gene: LOC101802322
product: cytochrome b5
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 14 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 126 samples with support for all annotated introns
transcript id: XM_027466392.2
SIO_010081: LOC101802322
subclass of: SO_0000673
so part of: LOC101802322
location: complement(join(1219416..1220423,1221403..1221434,1223213..1223239,1223769..1223897,1229044..1229256))
location: region:1219416-1229256:-1
so has part: feature:1229044-1229256:-1:exon
so has part: feature:1223769-1223897:-1:exon
so has part: feature:1223213-1223239:-1:exon
so has part: feature:1221403-1221434:-1:exon
so has part: feature:1219416-1220423:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1229044-1229256:-1:exon

position:1229044:-1
position: 1229044
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1223769-1223897:-1:exon

position:1223769:-1
position: 1223769
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1223897:-1
position: 1223897
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1223213-1223239:-1:exon

position:1223213:-1
position: 1223213
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1223239:-1
position: 1223239
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1221403-1221434:-1:exon

position:1221403:-1
position: 1221403
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1221434:-1
position: 1221434
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1219416-1220423:-1:exon

position:1220423:-1
position: 1220423
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC101802322
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8839
gene: LOC101802322
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: cytochrome b5
translation: MEAGKRAEGGSGEAAAGPAGPVFTLQEVARRNCSREAWLVIHGRVYDVTRFLEEHPGGEEVLLEQAGKDATESFEDVGHSTDAREMLKQYYIGEVHPHDRKKEGSKDQNVTSSGQASFWSTWLIPIFGALVIGLMYRYYMLEGRSS
SIO_010081: LOC101802322
subclass of: SO_0000673
so part of: LOC101802322
location: complement(join(1220333..1220423,1221403..1221434,1223213..1223239,1223769..1223897,1229044..1229205))
location: region:1220333-1229205:-1
so has part: feature:1229044-1229205:-1:exon
so has part: feature:1223769-1223897:-1:exon
so has part: feature:1223213-1223239:-1:exon
so has part: feature:1221403-1221434:-1:exon
so has part: feature:1220333-1220423:-1:exon

XP_027322193.2
type: Protein
SIO_000068: ncbiprotein

position:1220333:-1
position: 1220333
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1229205:-1
position: 1229205
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1229044-1229205:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1223769-1223897:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1223213-1223239:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1221403-1221434:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1220333-1220423:-1:exon

TERF2
type: Gene
subclass of: SO_0000704
RO_0002162: 8839
gene: TERF2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1230664..1238248
location: region:1230664-1238248:1
so has part: feature:1230664-1238248:1:exon
subclass of: SO_0000010

101799940
type: Gene
SIO_000068: ncbigene

position:1230664:1
position: 1230664
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1238248:1
position: 1238248
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1230664-1238248:1:exon

TERF2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8839
gene: TERF2
product: telomeric repeat binding factor 2, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 126 samples with support for all annotated introns
transcript id: XM_038185321.1
SIO_010081: TERF2
subclass of: SO_0000673
so part of: TERF2
location: join(1230664..1230853,1231583..1231678,1231828..1231958,1232239..1232325,1232667..1232813,1233188..1233561,1233748..1234131,1235561..1235646,1236332..1236384,1237271..1238248)
location: region:1230664-1238248:1
so has part: feature:1230664-1230853:1:exon
so has part: feature:1231583-1231678:1:exon
so has part: feature:1231828-1231958:1:exon
so has part: feature:1232239-1232325:1:exon
so has part: feature:1232667-1232813:1:exon
so has part: feature:1233188-1233561:1:exon
so has part: feature:1233748-1234131:1:exon
so has part: feature:1235561-1235646:1:exon
so has part: feature:1236332-1236384:1:exon
so has part: feature:1237271-1238248:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1230664-1230853:1:exon

position:1230853:1
position: 1230853
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1231583-1231678:1:exon

position:1231583:1
position: 1231583
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1231678:1
position: 1231678
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1231828-1231958:1:exon

position:1231828:1
position: 1231828
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1231958:1
position: 1231958
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1232239-1232325:1:exon

position:1232239:1
position: 1232239
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1232325:1
position: 1232325
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1232667-1232813:1:exon

position:1232667:1
position: 1232667
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1232813:1
position: 1232813
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1233188-1233561:1:exon

position:1233188:1
position: 1233188
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1233561:1
position: 1233561
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1233748-1234131:1:exon

position:1233748:1
position: 1233748
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1234131:1
position: 1234131
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1235561-1235646:1:exon

position:1235561:1
position: 1235561
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1235646:1
position: 1235646
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:1236332-1236384:1:exon

position:1236332:1
position: 1236332
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1236384:1
position: 1236384
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:1237271-1238248:1:exon

position:1237271:1
position: 1237271
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

TERF2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8839
gene: TERF2
product: telomeric repeat binding factor 2, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 126 samples with support for all annotated introns
transcript id: XM_038185323.1
SIO_010081: TERF2
subclass of: SO_0000673
so part of: TERF2
location: join(1230664..1230853,1231583..1231678,1231828..1231958,1232239..1232325,1232667..1232813,1233188..1233561,1233904..1234131,1235561..1235646,1236332..1236384,1237271..1238248)
location: region:1230664-1238248:1
so has part: feature:1230664-1230853:1:exon
so has part: feature:1231583-1231678:1:exon
so has part: feature:1231828-1231958:1:exon
so has part: feature:1232239-1232325:1:exon
so has part: feature:1232667-1232813:1:exon
so has part: feature:1233188-1233561:1:exon
so has part: feature:1233904-1234131:1:exon
so has part: feature:1235561-1235646:1:exon
so has part: feature:1236332-1236384:1:exon
so has part: feature:1237271-1238248:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1230664-1230853:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1231583-1231678:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1231828-1231958:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1232239-1232325:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1232667-1232813:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1233188-1233561:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1233904-1234131:1:exon

position:1233904:1
position: 1233904
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1235561-1235646:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1236332-1236384:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1237271-1238248:1:exon

TERF2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8839
gene: TERF2
product: telomeric repeat binding factor 2, transcript variant X6
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 28 samples with support for all annotated introns
transcript id: XM_038185327.1
SIO_010081: TERF2
subclass of: SO_0000673
so part of: TERF2
location: join(1230664..1230853,1231583..1231678,1231828..1231958,1232239..1232325,1232667..1232813,1233188..1233561,1235561..1235646,1236332..1236384,1237271..1238248)
location: region:1230664-1238248:1
so has part: feature:1230664-1230853:1:exon
so has part: feature:1231583-1231678:1:exon
so has part: feature:1231828-1231958:1:exon
so has part: feature:1232239-1232325:1:exon
so has part: feature:1232667-1232813:1:exon
so has part: feature:1233188-1233561:1:exon
so has part: feature:1235561-1235646:1:exon
so has part: feature:1236332-1236384:1:exon
so has part: feature:1237271-1238248:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1230664-1230853:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1231583-1231678:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1231828-1231958:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1232239-1232325:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1232667-1232813:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1233188-1233561:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1235561-1235646:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1236332-1236384:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1237271-1238248:1:exon

TERF2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8839
gene: TERF2
product: telomeric repeat binding factor 2, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 120 samples with support for all annotated introns
transcript id: XM_038185322.1
SIO_010081: TERF2
subclass of: SO_0000673
so part of: TERF2
location: join(1230664..1230853,1231828..1231958,1232239..1232325,1232667..1232813,1233188..1233561,1233748..1234131,1235561..1235646,1236332..1236384,1237271..1238248)
location: region:1230664-1238248:1
so has part: feature:1230664-1230853:1:exon
so has part: feature:1231828-1231958:1:exon
so has part: feature:1232239-1232325:1:exon
so has part: feature:1232667-1232813:1:exon
so has part: feature:1233188-1233561:1:exon
so has part: feature:1233748-1234131:1:exon
so has part: feature:1235561-1235646:1:exon
so has part: feature:1236332-1236384:1:exon
so has part: feature:1237271-1238248:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1230664-1230853:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1231828-1231958:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1232239-1232325:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1232667-1232813:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1233188-1233561:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1233748-1234131:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1235561-1235646:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1236332-1236384:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1237271-1238248:1:exon

TERF2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8839
gene: TERF2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: telomeric repeat-binding factor 2 isoform X1
translation: MAGERARGAGGRREKAAAAARGEEAMNRWVLQFYFHQAVEAYRAGRNRDFRQLRDVMQALLVRPLDKPPPVVQLLRVMQFLTRIEEGENLECSFDREMDLTPLESAMGILQLFQKEFSVPEKKVEPVRRMLKEAAVIVCIRNREFDKASLILKRHMGKDPRIQKKKAELQAIIREKNHAHPMIRTFSYKDFQQDMFQFMKTYVDSSEPVLVTMMKTLNSERAEEPKRLSAAPRSASRAKDKAAAPEPVGMEQEPAGAPKPAETAKDTVVPPSPAERAEGPAGVPEPMEASRCPAAAPEHVIAAVKNLQDVSERMEITEQPAAAAPELAEMPSRDSERQPPGTVTTYGISVLREAFKILSDSPDADALFTKLDETDFSLPKQLSPSVSHRNKRRKEEENQDSEISDPPEIPHKVKRLTISELVMEHDSQSNESSESPDSSQEPVVSSASKSVQKLPNQQESTENAKSREGKWSSLYTEEQKDSWSDEEELFSDAAQLEQNGHNSAVIGSKKQRWTAQESQWIKDGVRKYGEGRWKSICQRYPFQNRTAVMIKDRWRTMKRLGML
SIO_010081: TERF2
subclass of: SO_0000673
so part of: TERF2
location: join(1230679..1230853,1231583..1231678,1231828..1231958,1232239..1232325,1232667..1232813,1233188..1233561,1233748..1234131,1235561..1235646,1236332..1236384,1237271..1237429)
location: region:1230679-1237429:1
so has part: feature:1230679-1230853:1:exon
so has part: feature:1231583-1231678:1:exon
so has part: feature:1231828-1231958:1:exon
so has part: feature:1232239-1232325:1:exon
so has part: feature:1232667-1232813:1:exon
so has part: feature:1233188-1233561:1:exon
so has part: feature:1233748-1234131:1:exon
so has part: feature:1235561-1235646:1:exon
so has part: feature:1236332-1236384:1:exon
so has part: feature:1237271-1237429:1:exon

XP_038041249.1
type: Protein
SIO_000068: ncbiprotein

position:1230679:1
position: 1230679
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1237429:1
position: 1237429
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1230679-1230853:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1231583-1231678:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1231828-1231958:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1232239-1232325:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1232667-1232813:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1233188-1233561:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1233748-1234131:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1235561-1235646:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1236332-1236384:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1237271-1237429:1:exon

TERF2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8839
gene: TERF2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: telomeric repeat-binding factor 2 isoform X3
translation: MAGERARGAGGRREKAAAAARGEEAMNRWVLQFYFHQAVEAYRAGRNRDFRQLRDVMQALLVRPLDKPPPVVQLLRVMQFLTRIEEGENLECSFDREMDLTPLESAMGILQLFQKEFSVPEKKVEPVRRMLKEAAVIVCIRNREFDKASLILKRHMGKDPRIQKKKAELQAIIREKNHAHPMIRTFSYKDFQQDMFQFMKTYVDSSEPVLVTMMKTLNSERAEEPKRLSAAPRSASRAKDKAAAPEPVGMEQEPAGAPKPAETAKDTVVPPSPAERAEGPAGVPEPMEASRCPAAAPEHVIAAVKNLQDVSERMEITEQPAAAAPELAEMPSRDSERNKRRKEEENQDSEISDPPEIPHKVKRLTISELVMEHDSQSNESSESPDSSQEPVVSSASKSVQKLPNQQESTENAKSREGKWSSLYTEEQKDSWSDEEELFSDAAQLEQNGHNSAVIGSKKQRWTAQESQWIKDGVRKYGEGRWKSICQRYPFQNRTAVMIKDRWRTMKRLGML
SIO_010081: TERF2
subclass of: SO_0000673
so part of: TERF2
location: join(1230679..1230853,1231583..1231678,1231828..1231958,1232239..1232325,1232667..1232813,1233188..1233561,1233904..1234131,1235561..1235646,1236332..1236384,1237271..1237429)
location: region:1230679-1237429:1
so has part: feature:1230679-1230853:1:exon
so has part: feature:1231583-1231678:1:exon
so has part: feature:1231828-1231958:1:exon
so has part: feature:1232239-1232325:1:exon
so has part: feature:1232667-1232813:1:exon
so has part: feature:1233188-1233561:1:exon
so has part: feature:1233904-1234131:1:exon
so has part: feature:1235561-1235646:1:exon
so has part: feature:1236332-1236384:1:exon
so has part: feature:1237271-1237429:1:exon

XP_038041251.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1230679-1230853:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1231583-1231678:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1231828-1231958:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1232239-1232325:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1232667-1232813:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1233188-1233561:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1233904-1234131:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1235561-1235646:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1236332-1236384:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1237271-1237429:1:exon

TERF2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8839
gene: TERF2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: telomeric repeat-binding factor 2 isoform X5
translation: MAGERARGAGGRREKAAAAARGEEAMNRWVLQFYFHQAVEAYRAGRNRDFRQLRDVMQALLVRPLDKPPPVVQLLRVMQFLTRIEEGENLECSFDREMDLTPLESAMGILQLFQKEFSVPEKKVEPVRRMLKEAAVIVCIRNREFDKASLILKRHMGKDPRIQKKKAELQAIIREKNHAHPMIRTFSYKDFQQDMFQFMKTYVDSSEPVLVTMMKTLNSERAEEPKRLSAAPRSASRAKDKAAAPEPVGMEQEPAGAPKPAETAKDTVVPPSPAERAEGPAGVPEPMEASRCPAAAPEHVIAAVKNLQDVSERMEITEQPAAAAPELAEMPSRDSERSREGKWSSLYTEEQKDSWSDEEELFSDAAQLEQNGHNSAVIGSKKQRWTAQESQWIKDGVRKYGEGRWKSICQRYPFQNRTAVMIKDRWRTMKRLGML
SIO_010081: TERF2
subclass of: SO_0000673
so part of: TERF2
location: join(1230679..1230853,1231583..1231678,1231828..1231958,1232239..1232325,1232667..1232813,1233188..1233561,1235561..1235646,1236332..1236384,1237271..1237429)
location: region:1230679-1237429:1
so has part: feature:1230679-1230853:1:exon
so has part: feature:1231583-1231678:1:exon
so has part: feature:1231828-1231958:1:exon
so has part: feature:1232239-1232325:1:exon
so has part: feature:1232667-1232813:1:exon
so has part: feature:1233188-1233561:1:exon
so has part: feature:1235561-1235646:1:exon
so has part: feature:1236332-1236384:1:exon
so has part: feature:1237271-1237429:1:exon

XP_038041255.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1230679-1230853:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1231583-1231678:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1231828-1231958:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1232239-1232325:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1232667-1232813:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1233188-1233561:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1235561-1235646:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1236332-1236384:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1237271-1237429:1:exon

TERF2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8839
gene: TERF2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: telomeric repeat-binding factor 2 isoform X2
translation: MAGERARGAGGRREKAAAAARGEEAMNRWVLQFYFHQAVEAYRAGRNRDFRQLRDVMQECSFDREMDLTPLESAMGILQLFQKEFSVPEKKVEPVRRMLKEAAVIVCIRNREFDKASLILKRHMGKDPRIQKKKAELQAIIREKNHAHPMIRTFSYKDFQQDMFQFMKTYVDSSEPVLVTMMKTLNSERAEEPKRLSAAPRSASRAKDKAAAPEPVGMEQEPAGAPKPAETAKDTVVPPSPAERAEGPAGVPEPMEASRCPAAAPEHVIAAVKNLQDVSERMEITEQPAAAAPELAEMPSRDSERQPPGTVTTYGISVLREAFKILSDSPDADALFTKLDETDFSLPKQLSPSVSHRNKRRKEEENQDSEISDPPEIPHKVKRLTISELVMEHDSQSNESSESPDSSQEPVVSSASKSVQKLPNQQESTENAKSREGKWSSLYTEEQKDSWSDEEELFSDAAQLEQNGHNSAVIGSKKQRWTAQESQWIKDGVRKYGEGRWKSICQRYPFQNRTAVMIKDRWRTMKRLGML
SIO_010081: TERF2
subclass of: SO_0000673
so part of: TERF2
location: join(1230679..1230853,1231828..1231958,1232239..1232325,1232667..1232813,1233188..1233561,1233748..1234131,1235561..1235646,1236332..1236384,1237271..1237429)
location: region:1230679-1237429:1
so has part: feature:1230679-1230853:1:exon
so has part: feature:1231828-1231958:1:exon
so has part: feature:1232239-1232325:1:exon
so has part: feature:1232667-1232813:1:exon
so has part: feature:1233188-1233561:1:exon
so has part: feature:1233748-1234131:1:exon
so has part: feature:1235561-1235646:1:exon
so has part: feature:1236332-1236384:1:exon
so has part: feature:1237271-1237429:1:exon

XP_038041250.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1230679-1230853:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1231828-1231958:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1232239-1232325:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1232667-1232813:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1233188-1233561:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1233748-1234131:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1235561-1235646:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1236332-1236384:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1237271-1237429:1:exon

TERF2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8839
gene: TERF2
product: telomeric repeat binding factor 2, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 105 samples with support for all annotated introns
transcript id: XM_038185324.1
SIO_010081: TERF2
subclass of: SO_0000673
so part of: TERF2
location: join(1230849..1230986,1231583..1231678,1231828..1231958,1232239..1232325,1232667..1232813,1233188..1233561,1233748..1234131,1235561..1235646,1236332..1236384,1237271..1238248)
location: region:1230849-1238248:1
so has part: feature:1230849-1230986:1:exon
so has part: feature:1231583-1231678:1:exon
so has part: feature:1231828-1231958:1:exon
so has part: feature:1232239-1232325:1:exon
so has part: feature:1232667-1232813:1:exon
so has part: feature:1233188-1233561:1:exon
so has part: feature:1233748-1234131:1:exon
so has part: feature:1235561-1235646:1:exon
so has part: feature:1236332-1236384:1:exon
so has part: feature:1237271-1238248:1:exon

position:1230849:1
position: 1230849
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1230849-1230986:1:exon

position:1230986:1
position: 1230986
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1231583-1231678:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1231828-1231958:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1232239-1232325:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1232667-1232813:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1233188-1233561:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1233748-1234131:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1235561-1235646:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1236332-1236384:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1237271-1238248:1:exon

TERF2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8839
gene: TERF2
product: telomeric repeat binding factor 2, transcript variant X5
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 37 samples with support for all annotated introns
transcript id: XM_038185325.1
SIO_010081: TERF2
subclass of: SO_0000673
so part of: TERF2
location: join(1230853..1230974,1231583..1231678,1231828..1231958,1232239..1232325,1232667..1232813,1233188..1233561,1233748..1234131,1235561..1235646,1236332..1236384,1237271..1238248)
location: region:1230853-1238248:1
so has part: feature:1230853-1230974:1:exon
so has part: feature:1231583-1231678:1:exon
so has part: feature:1231828-1231958:1:exon
so has part: feature:1232239-1232325:1:exon
so has part: feature:1232667-1232813:1:exon
so has part: feature:1233188-1233561:1:exon
so has part: feature:1233748-1234131:1:exon
so has part: feature:1235561-1235646:1:exon
so has part: feature:1236332-1236384:1:exon
so has part: feature:1237271-1238248:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1230853-1230974:1:exon

position:1230974:1
position: 1230974
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1231583-1231678:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1231828-1231958:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1232239-1232325:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1232667-1232813:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1233188-1233561:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1233748-1234131:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1235561-1235646:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1236332-1236384:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1237271-1238248:1:exon

TERF2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8839
gene: TERF2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: telomeric repeat-binding factor 2 isoform X4
translation: MQFLTRIEEGENLECSFDREMDLTPLESAMGILQLFQKEFSVPEKKVEPVRRMLKEAAVIVCIRNREFDKASLILKRHMGKDPRIQKKKAELQAIIREKNHAHPMIRTFSYKDFQQDMFQFMKTYVDSSEPVLVTMMKTLNSERAEEPKRLSAAPRSASRAKDKAAAPEPVGMEQEPAGAPKPAETAKDTVVPPSPAERAEGPAGVPEPMEASRCPAAAPEHVIAAVKNLQDVSERMEITEQPAAAAPELAEMPSRDSERQPPGTVTTYGISVLREAFKILSDSPDADALFTKLDETDFSLPKQLSPSVSHRNKRRKEEENQDSEISDPPEIPHKVKRLTISELVMEHDSQSNESSESPDSSQEPVVSSASKSVQKLPNQQESTENAKSREGKWSSLYTEEQKDSWSDEEELFSDAAQLEQNGHNSAVIGSKKQRWTAQESQWIKDGVRKYGEGRWKSICQRYPFQNRTAVMIKDRWRTMKRLGML
SIO_010081: TERF2
subclass of: SO_0000673
so part of: TERF2
location: join(1231639..1231678,1231828..1231958,1232239..1232325,1232667..1232813,1233188..1233561,1233748..1234131,1235561..1235646,1236332..1236384,1237271..1237429)
location: region:1231639-1237429:1
so has part: feature:1231639-1231678:1:exon
so has part: feature:1231828-1231958:1:exon
so has part: feature:1232239-1232325:1:exon
so has part: feature:1232667-1232813:1:exon
so has part: feature:1233188-1233561:1:exon
so has part: feature:1233748-1234131:1:exon
so has part: feature:1235561-1235646:1:exon
so has part: feature:1236332-1236384:1:exon
so has part: feature:1237271-1237429:1:exon

XP_038041252.1
type: Protein
SIO_000068: ncbiprotein

position:1231639:1
position: 1231639
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1231639-1231678:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1231828-1231958:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1232239-1232325:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1232667-1232813:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1233188-1233561:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1233748-1234131:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1235561-1235646:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1236332-1236384:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1237271-1237429:1:exon

TERF2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8839
gene: TERF2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: telomeric repeat-binding factor 2 isoform X4
translation: MQFLTRIEEGENLECSFDREMDLTPLESAMGILQLFQKEFSVPEKKVEPVRRMLKEAAVIVCIRNREFDKASLILKRHMGKDPRIQKKKAELQAIIREKNHAHPMIRTFSYKDFQQDMFQFMKTYVDSSEPVLVTMMKTLNSERAEEPKRLSAAPRSASRAKDKAAAPEPVGMEQEPAGAPKPAETAKDTVVPPSPAERAEGPAGVPEPMEASRCPAAAPEHVIAAVKNLQDVSERMEITEQPAAAAPELAEMPSRDSERQPPGTVTTYGISVLREAFKILSDSPDADALFTKLDETDFSLPKQLSPSVSHRNKRRKEEENQDSEISDPPEIPHKVKRLTISELVMEHDSQSNESSESPDSSQEPVVSSASKSVQKLPNQQESTENAKSREGKWSSLYTEEQKDSWSDEEELFSDAAQLEQNGHNSAVIGSKKQRWTAQESQWIKDGVRKYGEGRWKSICQRYPFQNRTAVMIKDRWRTMKRLGML
SIO_010081: TERF2
subclass of: SO_0000673
so part of: TERF2
location: join(1231639..1231678,1231828..1231958,1232239..1232325,1232667..1232813,1233188..1233561,1233748..1234131,1235561..1235646,1236332..1236384,1237271..1237429)
location: region:1231639-1237429:1
so has part: feature:1231639-1231678:1:exon
so has part: feature:1231828-1231958:1:exon
so has part: feature:1232239-1232325:1:exon
so has part: feature:1232667-1232813:1:exon
so has part: feature:1233188-1233561:1:exon
so has part: feature:1233748-1234131:1:exon
so has part: feature:1235561-1235646:1:exon
so has part: feature:1236332-1236384:1:exon
so has part: feature:1237271-1237429:1:exon

XP_038041253.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1231639-1231678:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1231828-1231958:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1232239-1232325:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1232667-1232813:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1233188-1233561:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1233748-1234131:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1235561-1235646:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1236332-1236384:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1237271-1237429:1:exon

TMED6
type: Gene
subclass of: SO_0000704
RO_0002162: 8839
gene: TMED6
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1238396..1241813
location: region:1238396-1241813:1
so has part: feature:1238396-1241813:1:exon
subclass of: SO_0000010

119718131
type: Gene
SIO_000068: ncbigene

position:1238396:1
position: 1238396
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1241813:1
position: 1241813
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1238396-1241813:1:exon

TMED6
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8839
gene: TMED6
product: transmembrane p24 trafficking protein 6, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 53 samples with support for all annotated introns
transcript id: XM_038185329.1
SIO_010081: TMED6
subclass of: SO_0000673
so part of: TMED6
location: join(1238396..1239786,1240889..1241314,1241452..1241813)
location: region:1238396-1241813:1
so has part: feature:1238396-1239786:1:exon
so has part: feature:1240889-1241314:1:exon
so has part: feature:1241452-1241813:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1238396-1239786:1:exon

position:1239786:1
position: 1239786
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1240889-1241314:1:exon

position:1240889:1
position: 1240889
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1241314:1
position: 1241314
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1241452-1241813:1:exon

position:1241452:1
position: 1241452
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

TMED6
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8839
gene: TMED6
product: transmembrane p24 trafficking protein 6, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 48 samples with support for all annotated introns
transcript id: XM_038185330.1
SIO_010081: TMED6
subclass of: SO_0000673
so part of: TMED6
location: join(1238396..1239786,1240889..1241015,1241163..1241314,1241452..1241813)
location: region:1238396-1241813:1
so has part: feature:1238396-1239786:1:exon
so has part: feature:1240889-1241015:1:exon
so has part: feature:1241163-1241314:1:exon
so has part: feature:1241452-1241813:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1238396-1239786:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1240889-1241015:1:exon

position:1241015:1
position: 1241015
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1241163-1241314:1:exon

position:1241163:1
position: 1241163
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1241452-1241813:1:exon

TMED6
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8839
gene: TMED6
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: transmembrane emp24 domain-containing protein 6 isoform X1
translation: MLLLLALLLLLLGPAGCPRTEPLSSSSDEPLFRGADRYDFAVIVPAGTSECFWQFAHQSGNFFFSYEVQRATGFANSRIILATASDPNGFQIGASQDARGQINFPTRETGPHCPGPPPRGRGLLPGGCELPEHPPCSVGLKPLQLFPPREQKPPLLPAGFYQLCLDNQHNHFGFMQVYLNFGVYYDNFNTEKEQPEERRQLNDTLEAIGVSIRKLQLHIFHMWRFYNFARMRKGADSFLLESNYHYVNCWSMAQSCVIVLSGVLQLYFLKRLFNVQGSSKPRC
SIO_010081: TMED6
subclass of: SO_0000673
so part of: TMED6
location: join(1239586..1239786,1240889..1241314,1241452..1241676)
location: region:1239586-1241676:1
so has part: feature:1239586-1239786:1:exon
so has part: feature:1240889-1241314:1:exon
so has part: feature:1241452-1241676:1:exon

XP_038041257.1
type: Protein
SIO_000068: ncbiprotein

position:1239586:1
position: 1239586
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1241676:1
position: 1241676
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1239586-1239786:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1240889-1241314:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1241452-1241676:1:exon

TMED6
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8839
gene: TMED6
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: transmembrane emp24 domain-containing protein 6 isoform X2
translation: MLLLLALLLLLLGPAGCPRTEPLSSSSDEPLFRGADRYDFAVIVPAGTSECFWQFAHQSGNFFFSYEVQRATGFANSRIILATASDPNGFQIGASQDARGQINFPTRETGFYQLCLDNQHNHFGFMQVYLNFGVYYDNFNTEKEQPEERRQLNDTLEAIGVSIRKLQLHIFHMWRFYNFARMRKGADSFLLESNYHYVNCWSMAQSCVIVLSGVLQLYFLKRLFNVQGSSKPRC
SIO_010081: TMED6
subclass of: SO_0000673
so part of: TMED6
location: join(1239586..1239786,1240889..1241015,1241163..1241314,1241452..1241676)
location: region:1239586-1241676:1
so has part: feature:1239586-1239786:1:exon
so has part: feature:1240889-1241015:1:exon
so has part: feature:1241163-1241314:1:exon
so has part: feature:1241452-1241676:1:exon

XP_038041258.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1239586-1239786:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1240889-1241015:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1241163-1241314:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1241452-1241676:1:exon

NIP7
type: Gene
subclass of: SO_0000704
RO_0002162: 8839
gene: NIP7
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1242161..1243904)
location: region:1242161-1243904:-1
so has part: feature:1242161-1243904:-1:exon
subclass of: SO_0000010

119718133
type: Gene
SIO_000068: ncbigene

position:1242161:-1
position: 1242161
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1243904:-1
position: 1243904
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1242161-1243904:-1:exon

NIP7
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8839
gene: NIP7
product: nucleolar pre-rRNA processing protein NIP7
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 96% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_038185332.1
SIO_010081: NIP7
subclass of: SO_0000673
so part of: NIP7
location: complement(join(1242161..1242467,1242553..1242693,1242771..1242918,1243006..1243092,1243772..1243904))
location: region:1242161-1243904:-1
so has part: feature:1243772-1243904:-1:exon
so has part: feature:1243006-1243092:-1:exon
so has part: feature:1242771-1242918:-1:exon
so has part: feature:1242553-1242693:-1:exon
so has part: feature:1242161-1242467:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1243772-1243904:-1:exon

position:1243772:-1
position: 1243772
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1243006-1243092:-1:exon

position:1243006:-1
position: 1243006
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1243092:-1
position: 1243092
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1242771-1242918:-1:exon

position:1242771:-1
position: 1242771
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1242918:-1
position: 1242918
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1242553-1242693:-1:exon

position:1242553:-1
position: 1242553
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1242693:-1
position: 1242693
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1242161-1242467:-1:exon

position:1242467:-1
position: 1242467
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

NIP7
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8839
gene: NIP7
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: 60S ribosome subunit biogenesis protein NIP7 homolog
translation: MRPLTEAETRAVFEKLGRYIGENIQLLVERPDGTYCFRLHRDRVYYVSEKLLKGAASIPRGSLVALGTCFGKFTKTQKFRLNVTALDFLAPYCQGRGYKVWVKPGSEQSFLYGNHVLKSGLGRITENTAQYQGVVVYSMADVPLGFGVAAKSTQDCRKVDPMAIVVFHQADVGEYVRSEDTLT
SIO_010081: NIP7
subclass of: SO_0000673
so part of: NIP7
location: complement(join(1242348..1242467,1242553..1242693,1242771..1242918,1243006..1243092,1243772..1243827))
location: region:1242348-1243827:-1
so has part: feature:1243772-1243827:-1:exon
so has part: feature:1243006-1243092:-1:exon
so has part: feature:1242771-1242918:-1:exon
so has part: feature:1242553-1242693:-1:exon
so has part: feature:1242348-1242467:-1:exon

XP_038041260.1
type: Protein
SIO_000068: ncbiprotein

position:1242348:-1
position: 1242348
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1243827:-1
position: 1243827
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1243772-1243827:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1243006-1243092:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1242771-1242918:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1242553-1242693:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1242348-1242467:-1:exon

COG8
type: Gene
subclass of: SO_0000704
RO_0002162: 8839
gene: COG8
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1243877..1246505
location: region:1243877-1246505:1
so has part: feature:1243877-1246505:1:exon
subclass of: SO_0000010

119718129
type: Gene
SIO_000068: ncbigene

position:1243877:1
position: 1243877
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1246505:1
position: 1246505
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1243877-1246505:1:exon

COG8
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8839
gene: COG8
product: component of oligomeric golgi complex 8
exception: unclassified transcription discrepancy
note: The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: deleted 4 bases in 3 codons; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 Proteins, and 97% coverage of the annotated genomic feature by RNAseq alignments, including 123 samples with support for all annotated introns
transcript id: XM_038185320.1
SIO_010081: COG8
subclass of: SO_0000673
so part of: COG8
location: join(1243877..1244250,1244353..1244563,1244714..1245533,1245747..1245915,1246003..1246505)
location: region:1243877-1246505:1
so has part: feature:1243877-1244250:1:exon
so has part: feature:1244353-1244563:1:exon
so has part: feature:1244714-1245533:1:exon
so has part: feature:1245747-1245915:1:exon
so has part: feature:1246003-1246505:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1243877-1244250:1:exon

position:1244250:1
position: 1244250
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1244353-1244563:1:exon

position:1244353:1
position: 1244353
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1244563:1
position: 1244563
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1244714-1245533:1:exon

position:1244714:1
position: 1244714
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1245533:1
position: 1245533
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1245747-1245915:1:exon

position:1245747:1
position: 1245747
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1245915:1
position: 1245915
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1246003-1246505:1:exon

position:1246003:1
position: 1246003
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

COG8
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8839
gene: COG8
exception: unclassified translation discrepancy
note: The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: deleted 4 bases in 3 codons; Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: LOW QUALITY PROTEIN: conserved oligomeric Golgi complex subunit 8
translation: MAAAAEEARLLAWLRGPAAAGPGGAELSAYVAELAALGLAELGREPARLAAERARVGAETRRLAFEHYRAFIRSAECTGRAGRGFGGIESRLGSLLERLPALQDACRNFVRDCRPIACSRRMNSLTLNRHTEILEILEIPQLMDTCVRNRYYEEALELAAYVRRLEKKHSSIPVIQGIVAEVRQSTQLMLTELIQQLRTNIPLPACLRVIGYLRRMDVFTEAELRIKFLQARDAWLRSIQASIPEDDPYFHLTKTVEACRVHLFDIVTQYRAIFSDEEPLLAPEQPALNEGAIFHGWVLQKVSEFLQVLERDLQRGVGGRLDSLLGQCMYFGLSFSRVGADFRGQLAPIFQRVAAATFSKAVEEAVEKFQEEMNSYTLISAPAVLGSAAAVPVPTAQPGTLQPPMVLLDFPPLACFLNSLLVAFNDLRLCCPIALAQDVASCLQDALGKVTKVILAFHRAEEAAFSGREQELFVQFCTAFLEDLLPYLNRCLQLLFPPAQIAQALGVPPAQLQRFGRLGCIDVAAIRELLDPVLPAREAEPLPGEEEPVLQSPVPTAAPCPPQEEEKEKKKEEEEEGAVPGEPPAAQGQEDPTDPIVGALLPDAPPAVS
SIO_010081: COG8
subclass of: SO_0000673
so part of: COG8
location: join(1243931..1244250,1244353..1244563,1244714..1245533,1245747..1245915,1246003..1246316)
location: region:1243931-1246316:1
so has part: feature:1243931-1244250:1:exon
so has part: feature:1244353-1244563:1:exon
so has part: feature:1244714-1245533:1:exon
so has part: feature:1245747-1245915:1:exon
so has part: feature:1246003-1246316:1:exon

XP_038041248.1
type: Protein
SIO_000068: ncbiprotein

position:1243931:1
position: 1243931
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1246316:1
position: 1246316
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1243931-1244250:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1244353-1244563:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1244714-1245533:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1245747-1245915:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1246003-1246316:1:exon

PDF
type: Gene
subclass of: SO_0000704
RO_0002162: 8839
gene: PDF
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1246572..1247622
location: region:1246572-1247622:1
so has part: feature:1246572-1247622:1:exon
subclass of: SO_0000010

119718132
type: Gene
SIO_000068: ncbigene

position:1246572:1
position: 1246572
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1247622:1
position: 1247622
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1246572-1247622:1:exon

PDF
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8839
gene: PDF
product: peptide deformylase, mitochondrial
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 124 samples with support for all annotated introns
transcript id: XM_038185331.1
SIO_010081: PDF
subclass of: SO_0000673
so part of: PDF
location: join(1246572..1247135,1247211..1247622)
location: region:1246572-1247622:1
so has part: feature:1246572-1247135:1:exon
so has part: feature:1247211-1247622:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1246572-1247135:1:exon

position:1247135:1
position: 1247135
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1247211-1247622:1:exon

position:1247211:1
position: 1247211
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

PDF
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8839
gene: PDF
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: peptide deformylase, mitochondrial
translation: MAVALRRLLPGPAPGGSRCCGATAWGARERSYWRALRRRLLGPPVPPFSEPCQVGTPVLRSPAAAVPAESLGSPELRALAAALAAGLRRGPCLGLSAPQLGVPLRVFAAELPPARCSHYPAALRGAQRIEPFPLRVLVNPVLRVLDARLVTAPEGCASLRGFSACVPRHWAVHVSGVDESGQPVSWEAWGWAARVIQHELDHLDGVLFIDRMDSRTFTNTAWSQLLD
SIO_010081: PDF
subclass of: SO_0000673
so part of: PDF
location: join(1246610..1247135,1247211..1247368)
location: region:1246610-1247368:1
so has part: feature:1246610-1247135:1:exon
so has part: feature:1247211-1247368:1:exon

XP_038041259.1
type: Protein
SIO_000068: ncbiprotein

position:1246610:1
position: 1246610
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1247368:1
position: 1247368
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1246610-1247135:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1247211-1247368:1:exon

VPS4A
type: Gene
subclass of: SO_0000704
RO_0002162: 8839
gene: VPS4A
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1247573..1250710)
location: region:1247573-1250710:-1
so has part: feature:1247573-1250710:-1:exon
subclass of: SO_0000010

119718130
type: Gene
SIO_000068: ncbigene

position:1247573:-1
position: 1247573
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1250710:-1
position: 1250710
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1247573-1250710:-1:exon

VPS4A
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8839
gene: VPS4A
product: vacuolar protein sorting 4 homolog A
exception: unclassified transcription discrepancy
note: The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: inserted 2 bases in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 98% coverage of the annotated genomic feature by RNAseq alignments, including 126 samples with support for all annotated introns
transcript id: XM_038185328.1
SIO_010081: VPS4A
subclass of: SO_0000673
so part of: VPS4A
location: complement(join(1247573..1247997,1248280..1248420,1248503..1248722,1248847..1248928,1249052..1249200,1249338..1249494,1249659..1249778,1249959..1250020,1250101..1250249,1250336..1250447,1250528..1250710))
location: region:1247573-1250710:-1
so has part: feature:1250528-1250710:-1:exon
so has part: feature:1250336-1250447:-1:exon
so has part: feature:1250101-1250249:-1:exon
so has part: feature:1249959-1250020:-1:exon
so has part: feature:1249659-1249778:-1:exon
so has part: feature:1249338-1249494:-1:exon
so has part: feature:1249052-1249200:-1:exon
so has part: feature:1248847-1248928:-1:exon
so has part: feature:1248503-1248722:-1:exon
so has part: feature:1248280-1248420:-1:exon
so has part: feature:1247573-1247997:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1250528-1250710:-1:exon

position:1250528:-1
position: 1250528
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1250336-1250447:-1:exon

position:1250336:-1
position: 1250336
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1250447:-1
position: 1250447
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1250101-1250249:-1:exon

position:1250101:-1
position: 1250101
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1250249:-1
position: 1250249
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1249959-1250020:-1:exon

position:1249959:-1
position: 1249959
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1250020:-1
position: 1250020
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1249659-1249778:-1:exon

position:1249659:-1
position: 1249659
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1249778:-1
position: 1249778
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1249338-1249494:-1:exon

position:1249338:-1
position: 1249338
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1249494:-1
position: 1249494
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1249052-1249200:-1:exon

position:1249052:-1
position: 1249052
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1249200:-1
position: 1249200
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1248847-1248928:-1:exon

position:1248847:-1
position: 1248847
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1248928:-1
position: 1248928
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:1248503-1248722:-1:exon

position:1248503:-1
position: 1248503
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1248722:-1
position: 1248722
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:1248280-1248420:-1:exon

position:1248280:-1
position: 1248280
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1248420:-1
position: 1248420
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:1247573-1247997:-1:exon

position:1247997:-1
position: 1247997
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

VPS4A
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8839
gene: VPS4A
exception: unclassified translation discrepancy
note: The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: inserted 2 bases in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: LOW QUALITY PROTEIN: vacuolar protein sorting-associated protein 4A
translation: MTTSTLQKAIDLVTKATEEDKAKNYEEALRLYQHAVEYFLHAIKYEAQSDKAKESIRAKCVQYLDRAEKLKDYLRSKERQGRKPVKEAQXTDNKGSDSDSEGENPEKKKLQEQLMGAIMMEKPNVRWSDVAGLEGAKEALKEAVILPIKFPHLFTGKRTPWRGILLFGPPGTGKSYLAKAVATEANNSTFFSVSSSDLMSKWLGESEKLVKNLFELARQHKPSIIFIDEVDSLCGSRNENESEAARRIKTEFLVQMQGVGNSSDGILVLGATNIPWVLDSAIRRRFEKRIYIPLPEEAARAQMFKLHLGNTPHSLTDANIHELARKTEGYSGADISIIVRDALMQPVRKVQSAMHFKKVRGPSRTNPNLIVDDLLTPCSPGDPGAIEMTWMEVPSDKLMEPIVCMSDMLRSLATTRPTVNAEDLLKVKKFTEDFGQEG
SIO_010081: VPS4A
subclass of: SO_0000673
so part of: VPS4A
location: complement(join(1247896..1247997,1248280..1248420,1248503..1248722,1248847..1248928,1249052..1249200,1249338..1249494,1249659..1249778,1249959..1250020,1250101..1250249,1250336..1250447,1250528..1250548))
location: region:1247896-1250548:-1
so has part: feature:1250528-1250548:-1:exon
so has part: feature:1250336-1250447:-1:exon
so has part: feature:1250101-1250249:-1:exon
so has part: feature:1249959-1250020:-1:exon
so has part: feature:1249659-1249778:-1:exon
so has part: feature:1249338-1249494:-1:exon
so has part: feature:1249052-1249200:-1:exon
so has part: feature:1248847-1248928:-1:exon
so has part: feature:1248503-1248722:-1:exon
so has part: feature:1248280-1248420:-1:exon
so has part: feature:1247896-1247997:-1:exon

XP_038041256.1
type: Protein
SIO_000068: ncbiprotein

position:1247896:-1
position: 1247896
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1250548:-1
position: 1250548
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1250528-1250548:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1250336-1250447:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1250101-1250249:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1249959-1250020:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1249659-1249778:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1249338-1249494:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1249052-1249200:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1248847-1248928:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1248503-1248722:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1248280-1248420:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1247896-1247997:-1:exon

SNTB2
type: Gene
subclass of: SO_0000704
RO_0002162: 8839
gene: SNTB2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1252280..1258241)
location: region:1252280-1258241:-1
so has part: feature:1252280-1258241:-1:exon
subclass of: SO_0000010

119718164
type: Gene
SIO_000068: ncbigene

position:1252280:-1
position: 1252280
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1258241:-1
position: 1258241
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1252280-1258241:-1:exon

SNTB2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8839
gene: SNTB2
product: syntrophin beta 2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 123 samples with support for all annotated introns
transcript id: XM_038185584.1
SIO_010081: SNTB2
subclass of: SO_0000673
so part of: SNTB2
location: complement(join(1252280..1253084,1253177..1253358,1253476..1253672,1253761..1253903,1254021..1254222,1254486..1254696,1257692..1258241))
location: region:1252280-1258241:-1
so has part: feature:1257692-1258241:-1:exon
so has part: feature:1254486-1254696:-1:exon
so has part: feature:1254021-1254222:-1:exon
so has part: feature:1253761-1253903:-1:exon
so has part: feature:1253476-1253672:-1:exon
so has part: feature:1253177-1253358:-1:exon
so has part: feature:1252280-1253084:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1257692-1258241:-1:exon

position:1257692:-1
position: 1257692
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1254486-1254696:-1:exon

position:1254486:-1
position: 1254486
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1254696:-1
position: 1254696
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1254021-1254222:-1:exon

position:1254021:-1
position: 1254021
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1254222:-1
position: 1254222
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1253761-1253903:-1:exon

position:1253761:-1
position: 1253761
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1253903:-1
position: 1253903
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1253476-1253672:-1:exon

position:1253476:-1
position: 1253476
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1253672:-1
position: 1253672
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1253177-1253358:-1:exon

position:1253177:-1
position: 1253177
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1253358:-1
position: 1253358
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1252280-1253084:-1:exon

position:1253084:-1
position: 1253084
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

SNTB2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8839
gene: SNTB2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: beta-2-syntrophin
translation: MAWRHAGGGRVPVLAGPAPPCPPPCPAPGGMAVWTRAAKAGLLELLLRERWVRVAAELSGEALSLTAEPPEPPAEHGLNGLPNGGGAAEPAGGTGGGVRRVRVVKAEAGGLGISIKGGRENRMPVLISRIFPGLAAERSGELRLGDAILAVNGVDLRDATHDQAVQALKRAGREVVLEVKFMREVTPYIKKPSLVSDLPWEGAAPQSPSLSGSEDSGSPKHHGARDRKVIPLKMCFAARNLSMPDLENRLIELHSPDSRNTLILRCKDTATAHSWFTALHANITALLPQVLAELNATLGGGAGGREVKHIAWLAEQARLDGGRQQWRPVLMAVTEKDLLLYDAMPWTRDAWASPCHSYPLVATRLVHSGSGRRSPSLGSDLTFATRTGSRQGIEMHVFRVETHRDLSCWTRVLVQGCHAAAELIKEVSVGCTLGGQEVKLCIHYEGGFTVCREEGGGSVLFRYPYEKLKMSADDGIRTLYLDFGGPEGELALDLHSCPKPIVFILHTFLSAKVTRMGLLV
SIO_010081: SNTB2
subclass of: SO_0000673
so part of: SNTB2
location: complement(join(1252992..1253084,1253177..1253358,1253476..1253672,1253761..1253903,1254021..1254222,1254486..1254696,1257692..1258226))
location: region:1252992-1258226:-1
so has part: feature:1257692-1258226:-1:exon
so has part: feature:1254486-1254696:-1:exon
so has part: feature:1254021-1254222:-1:exon
so has part: feature:1253761-1253903:-1:exon
so has part: feature:1253476-1253672:-1:exon
so has part: feature:1253177-1253358:-1:exon
so has part: feature:1252992-1253084:-1:exon

XP_038041512.1
type: Protein
SIO_000068: ncbiprotein

position:1252992:-1
position: 1252992
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1258226:-1
position: 1258226
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1257692-1258226:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1254486-1254696:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1254021-1254222:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1253761-1253903:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1253476-1253672:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1253177-1253358:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1252992-1253084:-1:exon

UTP4
type: Gene
subclass of: SO_0000704
RO_0002162: 8839
gene: UTP4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1258895..1263648)
location: region:1258895-1263648:-1
so has part: feature:1258895-1263648:-1:exon
subclass of: SO_0000010

119718159
type: Gene
SIO_000068: ncbigene

position:1258895:-1
position: 1258895
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1263648:-1
position: 1263648
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1258895-1263648:-1:exon

UTP4
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8839
gene: UTP4
product: UTP4 small subunit processome component
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 126 samples with support for all annotated introns
transcript id: XM_038185575.1
SIO_010081: UTP4
subclass of: SO_0000673
so part of: UTP4
location: complement(join(1258895..1259040,1259133..1259243,1259393..1259578,1259694..1259789,1259896..1260002,1260193..1260352,1260435..1260557,1260649..1260713,1260991..1261087,1261347..1261438,1261531..1261702,1261782..1261993,1262104..1262193,1262306..1262390,1262484..1262675,1263385..1263648))
location: region:1258895-1263648:-1
so has part: feature:1263385-1263648:-1:exon
so has part: feature:1262484-1262675:-1:exon
so has part: feature:1262306-1262390:-1:exon
so has part: feature:1262104-1262193:-1:exon
so has part: feature:1261782-1261993:-1:exon
so has part: feature:1261531-1261702:-1:exon
so has part: feature:1261347-1261438:-1:exon
so has part: feature:1260991-1261087:-1:exon
so has part: feature:1260649-1260713:-1:exon
so has part: feature:1260435-1260557:-1:exon
so has part: feature:1260193-1260352:-1:exon
so has part: feature:1259896-1260002:-1:exon
so has part: feature:1259694-1259789:-1:exon
so has part: feature:1259393-1259578:-1:exon
so has part: feature:1259133-1259243:-1:exon
so has part: feature:1258895-1259040:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1263385-1263648:-1:exon

position:1263385:-1
position: 1263385
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1262484-1262675:-1:exon

position:1262484:-1
position: 1262484
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1262675:-1
position: 1262675
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1262306-1262390:-1:exon

position:1262306:-1
position: 1262306
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1262390:-1
position: 1262390
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1262104-1262193:-1:exon

position:1262104:-1
position: 1262104
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1262193:-1
position: 1262193
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1261782-1261993:-1:exon

position:1261782:-1
position: 1261782
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1261993:-1
position: 1261993
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1261531-1261702:-1:exon

position:1261531:-1
position: 1261531
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1261702:-1
position: 1261702
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1261347-1261438:-1:exon

position:1261347:-1
position: 1261347
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1261438:-1
position: 1261438
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1260991-1261087:-1:exon

position:1260991:-1
position: 1260991
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1261087:-1
position: 1261087
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:1260649-1260713:-1:exon

position:1260649:-1
position: 1260649
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1260713:-1
position: 1260713
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:1260435-1260557:-1:exon

position:1260435:-1
position: 1260435
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1260557:-1
position: 1260557
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:1260193-1260352:-1:exon

position:1260193:-1
position: 1260193
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1260352:-1
position: 1260352
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:1259896-1260002:-1:exon

position:1259896:-1
position: 1259896
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1260002:-1
position: 1260002
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:1259694-1259789:-1:exon

position:1259694:-1
position: 1259694
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1259789:-1
position: 1259789
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:1259393-1259578:-1:exon

position:1259393:-1
position: 1259393
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1259578:-1
position: 1259578
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:1259133-1259243:-1:exon

position:1259133:-1
position: 1259133
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1259243:-1
position: 1259243
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:1258895-1259040:-1:exon

position:1259040:-1
position: 1259040
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

UTP4
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8839
gene: UTP4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: U3 small nucleolar RNA-associated protein 4 homolog
translation: MGPLEVHRVRFFGLVPAGVRCLAYLPRRRRLALARTDGAVEVYGLAEGCFQEKAIPGHQARSVEALCWAAGERLFGAGLSGDITEYDLQRLRPARTIDGFGGPIWSMVANGGGTRLAIGCEDGSVKLFQVVPGGVQFEKNLDRQKGRVLCLSWHPSGTHLAAGSIDFIRVLDVRSGRTVQRIMVNYHVPKPKKRECVVWGIAFLSDGTVVSSDSFGRVQFWDWERGTLLESHTVSTSAVLSLAVSEQEDSIVVGTSTGATYQLQLLPVKAGGQEKRWVRTKPFQFHTHDVRAVAHSPTALISGGLDAQLVIRPLMEKVQRKGYEAVLRKFTFPHRRLVSCARKARLLLFQFSQHLELWRLGSTNETGKDGEVLPVCRMPEHLLQLNSKGPEHIYCSCVSPCGSWVAYCTASRFHLYRVQHEGDGVSVKKVPGVPKLLLPAYQLQCASDAGRLFVGSERGSVHVLQLLEPGGCKHLHTLRPPTGTAEAVYLLASSADGNWLAAVSGDWEIHVYSLKHFKHHCTVPTYSCAVTALAIHPATNNLVIAYADQQLFEFSIPQKQYTAWSRTVQNCGLHKAWLERDSPITHIAFNPQNPAHILLHDVYMFCVLDKSLPLPDASTPLLNQSTLKQLPEHARQRQLHAFKICKKFQPLLFAELLEENRLVLVERPLADIRAQLPPPVQQQPFGT
SIO_010081: UTP4
subclass of: SO_0000673
so part of: UTP4
location: complement(join(1258924..1259040,1259133..1259243,1259393..1259578,1259694..1259789,1259896..1260002,1260193..1260352,1260435..1260557,1260649..1260713,1260991..1261087,1261347..1261438,1261531..1261702,1261782..1261993,1262104..1262193,1262306..1262390,1262484..1262675,1263385..1263543))
location: region:1258924-1263543:-1
so has part: feature:1263385-1263543:-1:exon
so has part: feature:1262484-1262675:-1:exon
so has part: feature:1262306-1262390:-1:exon
so has part: feature:1262104-1262193:-1:exon
so has part: feature:1261782-1261993:-1:exon
so has part: feature:1261531-1261702:-1:exon
so has part: feature:1261347-1261438:-1:exon
so has part: feature:1260991-1261087:-1:exon
so has part: feature:1260649-1260713:-1:exon
so has part: feature:1260435-1260557:-1:exon
so has part: feature:1260193-1260352:-1:exon
so has part: feature:1259896-1260002:-1:exon
so has part: feature:1259694-1259789:-1:exon
so has part: feature:1259393-1259578:-1:exon
so has part: feature:1259133-1259243:-1:exon
so has part: feature:1258924-1259040:-1:exon

XP_038041503.1
type: Protein
SIO_000068: ncbiprotein

position:1258924:-1
position: 1258924
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1263543:-1
position: 1263543
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1263385-1263543:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1262484-1262675:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1262306-1262390:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1262104-1262193:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1261782-1261993:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1261531-1261702:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1261347-1261438:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1260991-1261087:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1260649-1260713:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1260435-1260557:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1260193-1260352:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1259896-1260002:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1259694-1259789:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1259393-1259578:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1259133-1259243:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1258924-1259040:-1:exon

CHTF8
type: Gene
subclass of: SO_0000704
RO_0002162: 8839
gene: CHTF8
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1263991..1265407
location: region:1263991-1265407:1
so has part: feature:1263991-1265407:1:exon
subclass of: SO_0000010

119718160
type: Gene
SIO_000068: ncbigene

position:1263991:1
position: 1263991
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1265407:1
position: 1265407
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1263991-1265407:1:exon

CHTF8
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8839
gene: CHTF8
product: chromosome transmission fidelity factor 8
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 126 samples with support for all annotated introns
transcript id: XM_038185576.1
SIO_010081: CHTF8
subclass of: SO_0000673
so part of: CHTF8
location: join(1263991..1264290,1264388..1264499,1264591..1265407)
location: region:1263991-1265407:1
so has part: feature:1263991-1264290:1:exon
so has part: feature:1264388-1264499:1:exon
so has part: feature:1264591-1265407:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1263991-1264290:1:exon

position:1264290:1
position: 1264290
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1264388-1264499:1:exon

position:1264388:1
position: 1264388
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1264499:1
position: 1264499
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1264591-1265407:1:exon

position:1264591:1
position: 1264591
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

CHTF8
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8839
gene: CHTF8
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: chromosome transmission fidelity protein 8 homolog
translation: MVQLIVSSGGSLPRWVLLELQGEVEARSGGALPGSLLGDLHYTRQGVPVLVVGHHVLYGKVVPLEKPFAVLVKEAAGPAEPHARYAVTALIKTKLLFKTRPKPIITNVPRKV
SIO_010081: CHTF8
subclass of: SO_0000673
so part of: CHTF8
location: join(1264268..1264290,1264388..1264499,1264591..1264794)
location: region:1264268-1264794:1
so has part: feature:1264268-1264290:1:exon
so has part: feature:1264388-1264499:1:exon
so has part: feature:1264591-1264794:1:exon

XP_038041504.1
type: Protein
SIO_000068: ncbiprotein

position:1264268:1
position: 1264268
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1264794:1
position: 1264794
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1264268-1264290:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1264388-1264499:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1264591-1264794:1:exon

HAS3
type: Gene
subclass of: SO_0000704
RO_0002162: 8839
gene: HAS3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1265391..1269500)
location: region:1265391-1269500:-1
so has part: feature:1265391-1269500:-1:exon
subclass of: SO_0000010

101794398
type: Gene
SIO_000068: ncbigene

position:1265391:-1
position: 1265391
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1269500:-1
position: 1269500
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1265391-1269500:-1:exon

HAS3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8839
gene: HAS3
product: hyaluronan synthase 3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 17 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 13 samples with support for all annotated introns
transcript id: XM_027466434.2
SIO_010081: HAS3
subclass of: SO_0000673
so part of: HAS3
location: complement(join(1265391..1267543,1267652..1267753,1268193..1268813,1269450..1269500))
location: region:1265391-1269500:-1
so has part: feature:1269450-1269500:-1:exon
so has part: feature:1268193-1268813:-1:exon
so has part: feature:1267652-1267753:-1:exon
so has part: feature:1265391-1267543:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1269450-1269500:-1:exon

position:1269450:-1
position: 1269450
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1268193-1268813:-1:exon

position:1268193:-1
position: 1268193
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1268813:-1
position: 1268813
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1267652-1267753:-1:exon

position:1267652:-1
position: 1267652
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1267753:-1
position: 1267753
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1265391-1267543:-1:exon

position:1267543:-1
position: 1267543
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

HAS3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8839
gene: HAS3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: hyaluronan synthase 3
translation: MPVSLSTALRVVGTSLFALAVLGGILAAYVTGYQFIHTEKHYLSFGLYGAILGLHLFIQSLFAFLEHRRMRGEGRPVRLGRSVALCIAAYQEDPDYLKKCLRSVKRIAFPDLKVVMVVDGNGPDDTYMLDIFHDVMGSERAGSYVWRSNFHAWGEGETEAGLREGLARVQALVRGTTYSCILQKWGGKREVMYTAFRALGDSVDYIQVCDSDTVLDPACTAEMLRILEADPRVGGVGGDVQILNKYDSWISFLSSVRYWMAFNVERACQSYFGCVQCISGPLGMYRNALLQQFLEDWYHQTFLGSKCSFGDDRHLTNRVLSLGYQTKYTARSKCLTETPTRYLRWLNQQTRWSKSYFREWLYNALWFHKHHLWMTYESVVTGFFPFFLIATVIQLFYRGRIWNILLFLLTVQLVGIIKATYACFLRGSAEMIFVSLYSLLYMSSLLPAKMFAIATINKSGWGTSGRRTIVVNFVGLLPVSVWVAVLLGGLAYTAYSQDLLSDTEVAFLVSGAILYACYWVALLTLYLAIVARRCGKRQEQCGLAFAEV
SIO_010081: HAS3
subclass of: SO_0000673
so part of: HAS3
location: complement(join(1266620..1267543,1267652..1267753,1268193..1268813))
location: region:1266620-1268813:-1
so has part: feature:1268193-1268813:-1:exon
so has part: feature:1267652-1267753:-1:exon
so has part: feature:1266620-1267543:-1:exon

XP_027322235.1
type: Protein
SIO_000068: ncbiprotein

position:1266620:-1
position: 1266620
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1268193-1268813:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1267652-1267753:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1266620-1267543:-1:exon

TANGO6
type: Gene
subclass of: SO_0000704
RO_0002162: 8839
gene: TANGO6
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1271654..1301998)
location: region:1271654-1301998:-1
so has part: feature:1271654-1301998:-1:exon
subclass of: SO_0000010

101794905
type: Gene
SIO_000068: ncbigene

position:1271654:-1
position: 1271654
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1301998:-1
position: 1301998
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1271654-1301998:-1:exon

TANGO6
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8839
gene: TANGO6
product: transport and golgi organization 6 homolog
exception: unclassified transcription discrepancy
note: The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: deleted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 99% coverage of the annotated genomic feature by RNAseq alignments, including 122 samples with support for all annotated introns
transcript id: XM_027465867.2
SIO_010081: TANGO6
subclass of: SO_0000673
so part of: TANGO6
location: complement(join(1271654..1272052,1274746..1274859,1276931..1277082,1280914..1281066,1284101..1284158,1284250..1284777,1287370..1287504,1290400..1290579,1290876..1291002,1292596..1292772,1294004..1294116,1297276..1297358,1297913..1298075,1298569..1298693,1299446..1299596,1300591..1300707,1301008..1301998))
location: region:1271654-1301998:-1
so has part: feature:1301008-1301998:-1:exon
so has part: feature:1300591-1300707:-1:exon
so has part: feature:1299446-1299596:-1:exon
so has part: feature:1298569-1298693:-1:exon
so has part: feature:1297913-1298075:-1:exon
so has part: feature:1297276-1297358:-1:exon
so has part: feature:1294004-1294116:-1:exon
so has part: feature:1292596-1292772:-1:exon
so has part: feature:1290876-1291002:-1:exon
so has part: feature:1290400-1290579:-1:exon
so has part: feature:1287370-1287504:-1:exon
so has part: feature:1284250-1284777:-1:exon
so has part: feature:1284101-1284158:-1:exon
so has part: feature:1280914-1281066:-1:exon
so has part: feature:1276931-1277082:-1:exon
so has part: feature:1274746-1274859:-1:exon
so has part: feature:1271654-1272052:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1301008-1301998:-1:exon

position:1301008:-1
position: 1301008
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1300591-1300707:-1:exon

position:1300591:-1
position: 1300591
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1300707:-1
position: 1300707
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1299446-1299596:-1:exon

position:1299446:-1
position: 1299446
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1299596:-1
position: 1299596
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1298569-1298693:-1:exon

position:1298569:-1
position: 1298569
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1298693:-1
position: 1298693
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1297913-1298075:-1:exon

position:1297913:-1
position: 1297913
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1298075:-1
position: 1298075
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1297276-1297358:-1:exon

position:1297276:-1
position: 1297276
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1297358:-1
position: 1297358
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1294004-1294116:-1:exon

position:1294004:-1
position: 1294004
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1294116:-1
position: 1294116
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1292596-1292772:-1:exon

position:1292596:-1
position: 1292596
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1292772:-1
position: 1292772
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:1290876-1291002:-1:exon

position:1290876:-1
position: 1290876
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1291002:-1
position: 1291002
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:1290400-1290579:-1:exon

position:1290400:-1
position: 1290400
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1290579:-1
position: 1290579
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:1287370-1287504:-1:exon

position:1287370:-1
position: 1287370
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1287504:-1
position: 1287504
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:1284250-1284777:-1:exon

position:1284250:-1
position: 1284250
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1284777:-1
position: 1284777
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:1284101-1284158:-1:exon

position:1284101:-1
position: 1284101
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1284158:-1
position: 1284158
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:1280914-1281066:-1:exon

position:1280914:-1
position: 1280914
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1281066:-1
position: 1281066
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:1276931-1277082:-1:exon

position:1276931:-1
position: 1276931
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1277082:-1
position: 1277082
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:1274746-1274859:-1:exon

position:1274746:-1
position: 1274746
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1274859:-1
position: 1274859
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:1271654-1272052:-1:exon

position:1272052:-1
position: 1272052
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

TANGO6
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8839
gene: TANGO6
exception: unclassified translation discrepancy
note: The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: deleted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: LOW QUALITY PROTEIN: transport and Golgi organization protein 6 homolog
translation: MRWHTGRQVSSTTCPTGTPGGRGGHTEPRYRPGTAPPGRALHGAATCPRWRRAGPPSIPPPSPQDGGGRQRPSPSPDLPKMAAGAARSSSPRHGGPKMAGGGEPAPGRVLEALELLLGQPAGPGERGGEAGPGPEGALRLETVLSNAAELNERLRREPGWAALRGLRSAVLARAPELAAGAEEGEGEPGWAAACAVLALLLCLKERLLALAALPAAPAAVPGAPPPPAADTLSAAQGRALRRALGAAVGLGVAPYLPPGVGQRPGPPLPPPPPGVTRGARLRAATGALVELCQHPALGGPLLAHHLGLLLAGLCLLGHGPAAHNEGLSEAERAQSREALQHILDRVYQPLAVRELLVLQGGPKQSRPSPGEETKPALVRAPAWLRRLCGQLLSERLMRPSGVQAVVRGIMEGTGGGTDAEAAAVDWRKCDAVAKILASCPQQCLSLEDYYKRVCPQILGLLHIQDKLTARQFQRVATTTLLTMAKEHPQLAEKYLLQPLLAPLLRCSDAAEIAAEDLSAGTVLVTEAELSSCVEDVLKVYVVGNDSSSLLLGSLQSVLGVVFCLYSFAKQNVSYLRSLCQEVLLWFLEKSERETSLSVLEGCAGLEGSVRRLHPRCCFRVGSEGGAVVAVEEPISDEDEALYQKVSSEQCYVESLVELLSHCQKSGLAGDFFIRCLKALTQVAAEDEAEVSPAAAAGGSLLELEQHHARQRRKLLVLQLVATLCESVSDTVFTDIAQVEEFVAATLQRACVSLARGRGVDVEAQTLSMAMGLVAAALGGAVQLKSSDFAILKCLLPLLEEVSRTHPDPVIQELAADLRIAICTHGAFSAQTVGTAAETLLGKKLGPSRTGGESPTGPPVTAPCQSPGAGGAPTQRGRGCGRPSAPKEGEEQSVHKEPGATGPAAAPSTESPAPAQLQELLLSAYDPQVPVRAAAVRALSSLISQRDPEALQMQEKILQVFLENVQHEDSFVYLSAIQGVALLSSEYPEQILPTLLARYGHPTQGTEDAPAAVSRMKLGEVLMRVTRALGDMVVKHREPLIHAFLRGSRDPDSVLRASSLSNLGELCQRLGFQLGSVIHEVTSCVTAIAKTDPEAEVRRAAVHVVVLLLRGLSEKATEVLRDVLRDLYRLLKHVVVAEPDGAAVLHAQLALEELGQAVRGGLFPPQVLEKKIVVLP
SIO_010081: TANGO6
subclass of: SO_0000673
so part of: TANGO6
location: complement(join(1271876..1272052,1274746..1274859,1276931..1277082,1280914..1281066,1284101..1284158,1284250..1284777,1287370..1287504,1290400..1290579,1290876..1291002,1292596..1292772,1294004..1294116,1297276..1297358,1297913..1298075,1298569..1298693,1299446..1299596,1300591..1300707,1301008..1301983))
location: region:1271876-1301983:-1
so has part: feature:1301008-1301983:-1:exon
so has part: feature:1300591-1300707:-1:exon
so has part: feature:1299446-1299596:-1:exon
so has part: feature:1298569-1298693:-1:exon
so has part: feature:1297913-1298075:-1:exon
so has part: feature:1297276-1297358:-1:exon
so has part: feature:1294004-1294116:-1:exon
so has part: feature:1292596-1292772:-1:exon
so has part: feature:1290876-1291002:-1:exon
so has part: feature:1290400-1290579:-1:exon
so has part: feature:1287370-1287504:-1:exon
so has part: feature:1284250-1284777:-1:exon
so has part: feature:1284101-1284158:-1:exon
so has part: feature:1280914-1281066:-1:exon
so has part: feature:1276931-1277082:-1:exon
so has part: feature:1274746-1274859:-1:exon
so has part: feature:1271876-1272052:-1:exon

XP_027321668.2
type: Protein
SIO_000068: ncbiprotein

position:1271876:-1
position: 1271876
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1301983:-1
position: 1301983
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1301008-1301983:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1300591-1300707:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1299446-1299596:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1298569-1298693:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1297913-1298075:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1297276-1297358:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1294004-1294116:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1292596-1292772:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1290876-1291002:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1290400-1290579:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1287370-1287504:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1284250-1284777:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1284101-1284158:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1280914-1281066:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1276931-1277082:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1274746-1274859:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1271876-1272052:-1:exon

CDH1
type: Gene
subclass of: SO_0000704
RO_0002162: 8839
gene: CDH1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1302729..1311581)
location: region:1302729-1311581:-1
so has part: feature:1302729-1311581:-1:exon
subclass of: SO_0000010

101794572
type: Gene
SIO_000068: ncbigene

position:1302729:-1
position: 1302729
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1311581:-1
position: 1311581
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1302729-1311581:-1:exon

CDH1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8839
gene: CDH1
product: cadherin 1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 20 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 54 samples with support for all annotated introns
transcript id: XM_027465868.2
SIO_010081: CDH1
subclass of: SO_0000673
so part of: CDH1
location: complement(join(1302729..1303872,1303950..1304093,1304275..1304405,1304482..1304703,1304940..1305164,1305266..1305408,1305514..1305758,1305847..1306032,1306128..1306256,1306339..1306514,1306639..1306783,1306855..1307010,1307148..1307279,1307395..1307618,1311197..1311311,1311407..1311581))
location: region:1302729-1311581:-1
so has part: feature:1311407-1311581:-1:exon
so has part: feature:1311197-1311311:-1:exon
so has part: feature:1307395-1307618:-1:exon
so has part: feature:1307148-1307279:-1:exon
so has part: feature:1306855-1307010:-1:exon
so has part: feature:1306639-1306783:-1:exon
so has part: feature:1306339-1306514:-1:exon
so has part: feature:1306128-1306256:-1:exon
so has part: feature:1305847-1306032:-1:exon
so has part: feature:1305514-1305758:-1:exon
so has part: feature:1305266-1305408:-1:exon
so has part: feature:1304940-1305164:-1:exon
so has part: feature:1304482-1304703:-1:exon
so has part: feature:1304275-1304405:-1:exon
so has part: feature:1303950-1304093:-1:exon
so has part: feature:1302729-1303872:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1311407-1311581:-1:exon

position:1311407:-1
position: 1311407
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1311197-1311311:-1:exon

position:1311197:-1
position: 1311197
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1311311:-1
position: 1311311
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1307395-1307618:-1:exon

position:1307395:-1
position: 1307395
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1307618:-1
position: 1307618
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1307148-1307279:-1:exon

position:1307148:-1
position: 1307148
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1307279:-1
position: 1307279
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1306855-1307010:-1:exon

position:1306855:-1
position: 1306855
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1307010:-1
position: 1307010
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1306639-1306783:-1:exon

position:1306639:-1
position: 1306639
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1306783:-1
position: 1306783
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1306339-1306514:-1:exon

position:1306339:-1
position: 1306339
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1306514:-1
position: 1306514
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1306128-1306256:-1:exon

position:1306128:-1
position: 1306128
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1306256:-1
position: 1306256
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:1305847-1306032:-1:exon

position:1305847:-1
position: 1305847
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1306032:-1
position: 1306032
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:1305514-1305758:-1:exon

position:1305514:-1
position: 1305514
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1305758:-1
position: 1305758
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:1305266-1305408:-1:exon

position:1305266:-1
position: 1305266
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1305408:-1
position: 1305408
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:1304940-1305164:-1:exon

position:1304940:-1
position: 1304940
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1305164:-1
position: 1305164
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:1304482-1304703:-1:exon

position:1304482:-1
position: 1304482
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1304703:-1
position: 1304703
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:1304275-1304405:-1:exon

position:1304275:-1
position: 1304275
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1304405:-1
position: 1304405
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:1303950-1304093:-1:exon

position:1303950:-1
position: 1303950
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1304093:-1
position: 1304093
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:1302729-1303872:-1:exon

position:1303872:-1
position: 1303872
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

CDH1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8839
gene: CDH1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: cadherin-1
translation: MGRQRGSMGPLCFPLLLLLLQVGGRRCDEAAPCQPGFTAETFTFTVPRDSVAAGEVLGRVLFSGCAGQPQAVHVPTDPRFEVDKDGILQTKQPLQLRGQKIRFNISALDATGKRHSAWVTVERRRSRQHRRSNQEDEPYMLSFPESGPSLRRQKRDWVIPPISCPENHRGPFPKQLVQIKSNKDKETKVFYSITGQGADSPPVGVFTIERETGWLEVTKPLDREEIEKYVLFSHAVSANGQPVEDPMEIIITVMDQNDNKPVFTKQLFVGYIEENAKPGTSVMTVNATDADDAVTVNNGIVSYSIVSQEPPKPHPQMFTIDPQKGVISVLGTGLDRETTPNYTLIVQATDQEGTGLSTTATAVIEVTDANDNIPIFDPTMYEGTVPENEVGLEVARLHVTDQDMPGSPAWQAVYRIKSGDQDGAFSITTDPNTNDGILRTAKGLDYETRNRYDLVVTVENKVPLSVSLGLSSASVLVLVRDVNEPPVFVPPVKRVEVPEDLPVGHEVASYTAQDPDKDQRNRITYRMGSDPAGWLAIDPENGIVTAAQPLDRESVHAINSTYKAIVLAVDNGVPDATGTGTLLLLLQDVNDNGPTPEPRIFDICSRQPEDQTLTIVDKDLPPNTYPFQAALEHGSGTNWTVEIFGQDSLVLKLKKELEPGEYSIFLKLTDSQGKAQMTEVKAQVCDCEGATKNCERRAFIATGLGVPAILGILGGILALLILLLLLLLFVRRRKVVKEPLLPPEDDMRDNVYHYDEEGGGEEDQDYDLSQLHRGLDARPEVIRNDVAPPLMAAPQYRPRPANPDEIGNFIDENLKAADTDPTAPPYDSLLVFDYEGSGSEAASLSSLNSSDSDQDQDYDYLNEWGNRFKKLAELYGGGEEDD
SIO_010081: CDH1
subclass of: SO_0000673
so part of: CDH1
location: complement(join(1303660..1303872,1303950..1304093,1304275..1304405,1304482..1304703,1304940..1305164,1305266..1305408,1305514..1305758,1305847..1306032,1306128..1306256,1306339..1306514,1306639..1306783,1306855..1307010,1307148..1307279,1307395..1307618,1311197..1311311,1311407..1311469))
location: region:1303660-1311469:-1
so has part: feature:1311407-1311469:-1:exon
so has part: feature:1311197-1311311:-1:exon
so has part: feature:1307395-1307618:-1:exon
so has part: feature:1307148-1307279:-1:exon
so has part: feature:1306855-1307010:-1:exon
so has part: feature:1306639-1306783:-1:exon
so has part: feature:1306339-1306514:-1:exon
so has part: feature:1306128-1306256:-1:exon
so has part: feature:1305847-1306032:-1:exon
so has part: feature:1305514-1305758:-1:exon
so has part: feature:1305266-1305408:-1:exon
so has part: feature:1304940-1305164:-1:exon
so has part: feature:1304482-1304703:-1:exon
so has part: feature:1304275-1304405:-1:exon
so has part: feature:1303950-1304093:-1:exon
so has part: feature:1303660-1303872:-1:exon

XP_027321669.2
type: Protein
SIO_000068: ncbiprotein

position:1303660:-1
position: 1303660
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1311469:-1
position: 1311469
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1311407-1311469:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1311197-1311311:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1307395-1307618:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1307148-1307279:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1306855-1307010:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1306639-1306783:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1306339-1306514:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1306128-1306256:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1305847-1306032:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1305514-1305758:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1305266-1305408:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1304940-1305164:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1304482-1304703:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1304275-1304405:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1303950-1304093:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1303660-1303872:-1:exon

CDH3
type: Gene
subclass of: SO_0000704
RO_0002162: 8839
gene: CDH3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1312294..1318209)
location: region:1312294-1318209:-1
so has part: feature:1312294-1318209:-1:exon
subclass of: SO_0000010

106020454
type: Gene
SIO_000068: ncbigene

position:1312294:-1
position: 1312294
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1318209:-1
position: 1318209
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1312294-1318209:-1:exon

CDH3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8839
gene: CDH3
product: cadherin 3, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 10 Proteins, and 97% coverage of the annotated genomic feature by RNAseq alignments, including 53 samples with support for all annotated introns
transcript id: XM_038185335.1
SIO_010081: CDH3
subclass of: SO_0000673
so part of: CDH3
location: complement(join(1312294..1312759,1312837..1312980,1313051..1313181,1313260..1313478,1313564..1313788,1313992..1314134,1314217..1314728,1314801..1314929,1315024..1315199,1315351..1315495,1315580..1315735,1315962..1316072,1316167..1316303,1318007..1318209))
location: region:1312294-1318209:-1
so has part: feature:1318007-1318209:-1:exon
so has part: feature:1316167-1316303:-1:exon
so has part: feature:1315962-1316072:-1:exon
so has part: feature:1315580-1315735:-1:exon
so has part: feature:1315351-1315495:-1:exon
so has part: feature:1315024-1315199:-1:exon
so has part: feature:1314801-1314929:-1:exon
so has part: feature:1314217-1314728:-1:exon
so has part: feature:1313992-1314134:-1:exon
so has part: feature:1313564-1313788:-1:exon
so has part: feature:1313260-1313478:-1:exon
so has part: feature:1313051-1313181:-1:exon
so has part: feature:1312837-1312980:-1:exon
so has part: feature:1312294-1312759:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1318007-1318209:-1:exon

position:1318007:-1
position: 1318007
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1316167-1316303:-1:exon

position:1316167:-1
position: 1316167
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1316303:-1
position: 1316303
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1315962-1316072:-1:exon

position:1315962:-1
position: 1315962
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1316072:-1
position: 1316072
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1315580-1315735:-1:exon

position:1315580:-1
position: 1315580
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1315735:-1
position: 1315735
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1315351-1315495:-1:exon

position:1315351:-1
position: 1315351
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1315495:-1
position: 1315495
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1315024-1315199:-1:exon

position:1315024:-1
position: 1315024
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1315199:-1
position: 1315199
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1314801-1314929:-1:exon

position:1314801:-1
position: 1314801
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1314929:-1
position: 1314929
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1314217-1314728:-1:exon

position:1314217:-1
position: 1314217
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1314728:-1
position: 1314728
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:1313992-1314134:-1:exon

position:1313992:-1
position: 1313992
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1314134:-1
position: 1314134
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:1313564-1313788:-1:exon

position:1313564:-1
position: 1313564
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1313788:-1
position: 1313788
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:1313260-1313478:-1:exon

position:1313260:-1
position: 1313260
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1313478:-1
position: 1313478
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:1313051-1313181:-1:exon

position:1313051:-1
position: 1313051
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1313181:-1
position: 1313181
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:1312837-1312980:-1:exon

position:1312837:-1
position: 1312837
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1312980:-1
position: 1312980
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:1312294-1312759:-1:exon

position:1312759:-1
position: 1312759
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

CDH3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8839
gene: CDH3
product: cadherin 3, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 10 Proteins, and 97% coverage of the annotated genomic feature by RNAseq alignments, including 72 samples with support for all annotated introns
transcript id: XM_038185334.1
SIO_010081: CDH3
subclass of: SO_0000673
so part of: CDH3
location: complement(join(1312294..1312759,1312837..1312980,1313051..1313181,1313260..1313478,1313564..1313788,1313992..1314134,1314217..1314728,1314801..1314929,1315024..1315199,1315351..1315495,1315580..1315735,1315962..1316072,1316167..1316306,1318007..1318209))
location: region:1312294-1318209:-1
so has part: feature:1318007-1318209:-1:exon
so has part: feature:1316167-1316306:-1:exon
so has part: feature:1315962-1316072:-1:exon
so has part: feature:1315580-1315735:-1:exon
so has part: feature:1315351-1315495:-1:exon
so has part: feature:1315024-1315199:-1:exon
so has part: feature:1314801-1314929:-1:exon
so has part: feature:1314217-1314728:-1:exon
so has part: feature:1313992-1314134:-1:exon
so has part: feature:1313564-1313788:-1:exon
so has part: feature:1313260-1313478:-1:exon
so has part: feature:1313051-1313181:-1:exon
so has part: feature:1312837-1312980:-1:exon
so has part: feature:1312294-1312759:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1318007-1318209:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1316167-1316306:-1:exon

position:1316306:-1
position: 1316306
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1315962-1316072:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1315580-1315735:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1315351-1315495:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1315024-1315199:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1314801-1314929:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1314217-1314728:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1313992-1314134:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1313564-1313788:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1313260-1313478:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1313051-1313181:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1312837-1312980:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1312294-1312759:-1:exon

CDH3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8839
gene: CDH3
product: cadherin 3, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 22 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 72 samples with support for all annotated introns
transcript id: XM_027465871.2
SIO_010081: CDH3
subclass of: SO_0000673
so part of: CDH3
location: complement(join(1312294..1312759,1312837..1312980,1313051..1313181,1313260..1313478,1313564..1313788,1313992..1314134,1314217..1314461,1314543..1314728,1314801..1314929,1315024..1315199,1315351..1315495,1315580..1315735,1315962..1316072,1316167..1316306,1318007..1318208))
location: region:1312294-1318208:-1
so has part: feature:1318007-1318208:-1:exon
so has part: feature:1316167-1316306:-1:exon
so has part: feature:1315962-1316072:-1:exon
so has part: feature:1315580-1315735:-1:exon
so has part: feature:1315351-1315495:-1:exon
so has part: feature:1315024-1315199:-1:exon
so has part: feature:1314801-1314929:-1:exon
so has part: feature:1314543-1314728:-1:exon
so has part: feature:1314217-1314461:-1:exon
so has part: feature:1313992-1314134:-1:exon
so has part: feature:1313564-1313788:-1:exon
so has part: feature:1313260-1313478:-1:exon
so has part: feature:1313051-1313181:-1:exon
so has part: feature:1312837-1312980:-1:exon
so has part: feature:1312294-1312759:-1:exon

position:1318208:-1
position: 1318208
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1318007-1318208:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1316167-1316306:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1315962-1316072:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1315580-1315735:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1315351-1315495:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1315024-1315199:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1314801-1314929:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1314543-1314728:-1:exon

position:1314543:-1
position: 1314543
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:1314217-1314461:-1:exon

position:1314461:-1
position: 1314461
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:1313992-1314134:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1313564-1313788:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1313260-1313478:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1313051-1313181:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1312837-1312980:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1312294-1312759:-1:exon

CDH3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8839
gene: CDH3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: cadherin-3 isoform X2
translation: MRGSRSGLCPLLLLLLLPPAAAPARPCAPPGPGDGTVQYEDEEPHMGAVAPRPPGWLPVTPQDATILPGPVRSRRSLQEVPDVPRALRRRKRDWVIPPIKVPENERGPFPKKLVQIKSNRDREAKIFYSITGQGADTPPEGIFTIEKETGWMKVTQPLDREHMDKYHLFSHAVSENGKPVEEPMEIIVTVTDQNDNKPQFTQEVFRGSVPEGALPGTSVMQVNATDADDAVETYNGVLAYSILSQEPREPHPHMFTVNRATGTLSVIASGLDRERVREYTLTVQAADLDGEGLTTTALAVIEITDVNDNAPEFDPKTYEAAVPENEAGLEVTRLHTTDLDEPQTPAWRAVYSIVRGNEGGAFTITTDPASNEGVLRTAKVRVPCPSPRCGHPPCVVLPVPSCALLQALDYEAKRQFVLHVAVANEAPFAVKLPTATATVTVSVEDVNEAPVFDPPVRLAQVAEDASLGQLLASYTAQDPDRAQRQRIKYVVGSDPAGWLDVHPENGLITARDHLDRESPFAKNSTYVAVLLAVDDGSPPATGTGTLLLTLLDVNDHGPEPEPRNIVVCNRSPVPQVLTVIDRDLPPNTGPFRAELSHGSGDSWAVEVGDTGDTVTLRLTEPLEQEEYSVYLRLFDRQGKDQVTVIKAQVCDCQGRVESCAYEPQVATGVPIILAVLGALLAFLIILLLLLLFVRRRKVVKEPLLLPEDDTRDNVFYYGEEGGGEEDQDYDLSQLHRGLDARPEVIRNDVAPPLMAAPQYRPRPANPEDIGTFIDENLKAADTDPTAPPYDSLLVFDYEGSGSEAASLSSLNSSDSDQDQDYDYLNEWGNRFKKLAELYGGGEDDE
SIO_010081: CDH3
subclass of: SO_0000673
so part of: CDH3
location: complement(join(1312547..1312759,1312837..1312980,1313051..1313181,1313260..1313478,1313564..1313788,1313992..1314134,1314217..1314728,1314801..1314929,1315024..1315199,1315351..1315495,1315580..1315735,1315962..1316072,1316167..1316303,1318007..1318103))
location: region:1312547-1318103:-1
so has part: feature:1318007-1318103:-1:exon
so has part: feature:1316167-1316303:-1:exon
so has part: feature:1315962-1316072:-1:exon
so has part: feature:1315580-1315735:-1:exon
so has part: feature:1315351-1315495:-1:exon
so has part: feature:1315024-1315199:-1:exon
so has part: feature:1314801-1314929:-1:exon
so has part: feature:1314217-1314728:-1:exon
so has part: feature:1313992-1314134:-1:exon
so has part: feature:1313564-1313788:-1:exon
so has part: feature:1313260-1313478:-1:exon
so has part: feature:1313051-1313181:-1:exon
so has part: feature:1312837-1312980:-1:exon
so has part: feature:1312547-1312759:-1:exon

XP_038041263.1
type: Protein
SIO_000068: ncbiprotein

position:1312547:-1
position: 1312547
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1318103:-1
position: 1318103
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1318007-1318103:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1316167-1316303:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1315962-1316072:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1315580-1315735:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1315351-1315495:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1315024-1315199:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1314801-1314929:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1314217-1314728:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1313992-1314134:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1313564-1313788:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1313260-1313478:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1313051-1313181:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1312837-1312980:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1312547-1312759:-1:exon

CDH3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8839
gene: CDH3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: cadherin-3 isoform X3
translation: MRGSRSGLCPLLLLLLLPPAAAPARPCAPPGPAGDGTVQYEDEEPHMGAVAPRPPGWLPVTPQDATILPGPVRSRRSLQEVPDVPRALRRRKRDWVIPPIKVPENERGPFPKKLVQIKSNRDREAKIFYSITGQGADTPPEGIFTIEKETGWMKVTQPLDREHMDKYHLFSHAVSENGKPVEEPMEIIVTVTDQNDNKPQFTQEVFRGSVPEGALPGTSVMQVNATDADDAVETYNGVLAYSILSQEPREPHPHMFTVNRATGTLSVIASGLDRERVREYTLTVQAADLDGEGLTTTALAVIEITDVNDNAPEFDPKTYEAAVPENEAGLEVTRLHTTDLDEPQTPAWRAVYSIVRGNEGGAFTITTDPASNEGVLRTAKALDYEAKRQFVLHVAVANEAPFAVKLPTATATVTVSVEDVNEAPVFDPPVRLAQVAEDASLGQLLASYTAQDPDRAQRQRIKYVVGSDPAGWLDVHPENGLITARDHLDRESPFAKNSTYVAVLLAVDDGSPPATGTGTLLLTLLDVNDHGPEPEPRNIVVCNRSPVPQVLTVIDRDLPPNTGPFRAELSHGSGDSWAVEVGDTGDTVTLRLTEPLEQEEYSVYLRLFDRQGKDQVTVIKAQVCDCQGRVESCAYEPQVATGVPIILAVLGALLAFLIILLLLLLFVRRRKVVKEPLLLPEDDTRDNVFYYGEEGGGEEDQDYDLSQLHRGLDARPEVIRNDVAPPLMAAPQYRPRPANPEDIGTFIDENLKAADTDPTAPPYDSLLVFDYEGSGSEAASLSSLNSSDSDQDQDYDYLNEWGNRFKKLAELYGGGEDDE
SIO_010081: CDH3
subclass of: SO_0000673
so part of: CDH3
location: complement(join(1312547..1312759,1312837..1312980,1313051..1313181,1313260..1313478,1313564..1313788,1313992..1314134,1314217..1314461,1314543..1314728,1314801..1314929,1315024..1315199,1315351..1315495,1315580..1315735,1315962..1316072,1316167..1316306,1318007..1318103))
location: region:1312547-1318103:-1
so has part: feature:1318007-1318103:-1:exon
so has part: feature:1316167-1316306:-1:exon
so has part: feature:1315962-1316072:-1:exon
so has part: feature:1315580-1315735:-1:exon
so has part: feature:1315351-1315495:-1:exon
so has part: feature:1315024-1315199:-1:exon
so has part: feature:1314801-1314929:-1:exon
so has part: feature:1314543-1314728:-1:exon
so has part: feature:1314217-1314461:-1:exon
so has part: feature:1313992-1314134:-1:exon
so has part: feature:1313564-1313788:-1:exon
so has part: feature:1313260-1313478:-1:exon
so has part: feature:1313051-1313181:-1:exon
so has part: feature:1312837-1312980:-1:exon
so has part: feature:1312547-1312759:-1:exon

XP_027321672.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1318007-1318103:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1316167-1316306:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1315962-1316072:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1315580-1315735:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1315351-1315495:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1315024-1315199:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1314801-1314929:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1314543-1314728:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1314217-1314461:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1313992-1314134:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1313564-1313788:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1313260-1313478:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1313051-1313181:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1312837-1312980:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1312547-1312759:-1:exon

CDH3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8839
gene: CDH3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: cadherin-3 isoform X1
translation: MRGSRSGLCPLLLLLLLPPAAAPARPCAPPGPAGDGTVQYEDEEPHMGAVAPRPPGWLPVTPQDATILPGPVRSRRSLQEVPDVPRALRRRKRDWVIPPIKVPENERGPFPKKLVQIKSNRDREAKIFYSITGQGADTPPEGIFTIEKETGWMKVTQPLDREHMDKYHLFSHAVSENGKPVEEPMEIIVTVTDQNDNKPQFTQEVFRGSVPEGALPGTSVMQVNATDADDAVETYNGVLAYSILSQEPREPHPHMFTVNRATGTLSVIASGLDRERVREYTLTVQAADLDGEGLTTTALAVIEITDVNDNAPEFDPKTYEAAVPENEAGLEVTRLHTTDLDEPQTPAWRAVYSIVRGNEGGAFTITTDPASNEGVLRTAKVRVPCPSPRCGHPPCVVLPVPSCALLQALDYEAKRQFVLHVAVANEAPFAVKLPTATATVTVSVEDVNEAPVFDPPVRLAQVAEDASLGQLLASYTAQDPDRAQRQRIKYVVGSDPAGWLDVHPENGLITARDHLDRESPFAKNSTYVAVLLAVDDGSPPATGTGTLLLTLLDVNDHGPEPEPRNIVVCNRSPVPQVLTVIDRDLPPNTGPFRAELSHGSGDSWAVEVGDTGDTVTLRLTEPLEQEEYSVYLRLFDRQGKDQVTVIKAQVCDCQGRVESCAYEPQVATGVPIILAVLGALLAFLIILLLLLLFVRRRKVVKEPLLLPEDDTRDNVFYYGEEGGGEEDQDYDLSQLHRGLDARPEVIRNDVAPPLMAAPQYRPRPANPEDIGTFIDENLKAADTDPTAPPYDSLLVFDYEGSGSEAASLSSLNSSDSDQDQDYDYLNEWGNRFKKLAELYGGGEDDE
SIO_010081: CDH3
subclass of: SO_0000673
so part of: CDH3
location: complement(join(1312547..1312759,1312837..1312980,1313051..1313181,1313260..1313478,1313564..1313788,1313992..1314134,1314217..1314728,1314801..1314929,1315024..1315199,1315351..1315495,1315580..1315735,1315962..1316072,1316167..1316306,1318007..1318103))
location: region:1312547-1318103:-1
so has part: feature:1318007-1318103:-1:exon
so has part: feature:1316167-1316306:-1:exon
so has part: feature:1315962-1316072:-1:exon
so has part: feature:1315580-1315735:-1:exon
so has part: feature:1315351-1315495:-1:exon
so has part: feature:1315024-1315199:-1:exon
so has part: feature:1314801-1314929:-1:exon
so has part: feature:1314217-1314728:-1:exon
so has part: feature:1313992-1314134:-1:exon
so has part: feature:1313564-1313788:-1:exon
so has part: feature:1313260-1313478:-1:exon
so has part: feature:1313051-1313181:-1:exon
so has part: feature:1312837-1312980:-1:exon
so has part: feature:1312547-1312759:-1:exon

XP_038041262.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1318007-1318103:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1316167-1316306:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1315962-1316072:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1315580-1315735:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1315351-1315495:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1315024-1315199:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1314801-1314929:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1314217-1314728:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1313992-1314134:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1313564-1313788:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1313260-1313478:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1313051-1313181:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1312837-1312980:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1312547-1312759:-1:exon

LOC106020320
type: Gene
subclass of: SO_0000704
RO_0002162: 8839
gene: LOC106020320
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1318313..1323975
location: region:1318313-1323975:1
so has part: feature:1318313-1323975:1:exon
subclass of: SO_0000010

106020320
type: Gene
SIO_000068: ncbigene

position:1318313:1
position: 1318313
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1323975:1
position: 1323975
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1318313-1323975:1:exon

LOC106020320
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8839
gene: LOC106020320
product: cadherin-1
exception: unclassified transcription discrepancy
note: The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: deleted 2 bases in 2 codons; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 12 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments, including 31 samples with support for all annotated introns
transcript id: XM_038185336.1
SIO_010081: LOC106020320
subclass of: SO_0000673
so part of: LOC106020320
location: join(1318313..1318810,1318918..1319061,1319199..1319354,1319426..1319570,1319695..1319871,1319954..1320082,1320178..1320363,1320453..1320697,1320804..1320946,1321048..1321272,1321509..1321732,1323203..1323342,1323451..1323586,1323817..1323975)
location: region:1318313-1323975:1
so has part: feature:1318313-1318810:1:exon
so has part: feature:1318918-1319061:1:exon
so has part: feature:1319199-1319354:1:exon
so has part: feature:1319426-1319570:1:exon
so has part: feature:1319695-1319871:1:exon
so has part: feature:1319954-1320082:1:exon
so has part: feature:1320178-1320363:1:exon
so has part: feature:1320453-1320697:1:exon
so has part: feature:1320804-1320946:1:exon
so has part: feature:1321048-1321272:1:exon
so has part: feature:1321509-1321732:1:exon
so has part: feature:1323203-1323342:1:exon
so has part: feature:1323451-1323586:1:exon
so has part: feature:1323817-1323975:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1318313-1318810:1:exon

position:1318810:1
position: 1318810
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1318918-1319061:1:exon

position:1318918:1
position: 1318918
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1319061:1
position: 1319061
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1319199-1319354:1:exon

position:1319199:1
position: 1319199
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1319354:1
position: 1319354
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1319426-1319570:1:exon

position:1319426:1
position: 1319426
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1319570:1
position: 1319570
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1319695-1319871:1:exon

position:1319695:1
position: 1319695
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1319871:1
position: 1319871
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1319954-1320082:1:exon

position:1319954:1
position: 1319954
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1320082:1
position: 1320082
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1320178-1320363:1:exon

position:1320178:1
position: 1320178
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1320363:1
position: 1320363
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1320453-1320697:1:exon

position:1320453:1
position: 1320453
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1320697:1
position: 1320697
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:1320804-1320946:1:exon

position:1320804:1
position: 1320804
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1320946:1
position: 1320946
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:1321048-1321272:1:exon

position:1321048:1
position: 1321048
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1321272:1
position: 1321272
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:1321509-1321732:1:exon

position:1321509:1
position: 1321509
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1321732:1
position: 1321732
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:1323203-1323342:1:exon

position:1323203:1
position: 1323203
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1323342:1
position: 1323342
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:1323451-1323586:1:exon

position:1323451:1
position: 1323451
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1323586:1
position: 1323586
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:1323817-1323975:1:exon

position:1323817:1
position: 1323817
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC106020320
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8839
gene: LOC106020320
exception: unclassified translation discrepancy
note: The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: deleted 2 bases in 2 codons; Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: LOW QUALITY PROTEIN: cadherin-1
translation: MAPCTFLLLLLLLLLQVTVLSTHVDDVAFSKSGRSLRRQKRDWVIPPISCPENHRGPFPKQLVQIKSNKDKEIKVFYSITGQGVDSPPVGVFTIERETGWLEVTKPLDREEIEKYVIFSHAVSANGQPVEDPMEIIITVRDQNDNKPVFTKQLFVGYIEENAKPGTSVMTVNATDADDAVTVNNGIVSYSIVSQEPPKPHPQMFTIDPQKGVISVLGTGLDRETTPNYTLIVQATDQEGTGLSTTATAVIEVTDANDNIPIFDPTMYEGTVPENEVGLEVARLHVTDQDMPGSPAWQAVYRIKSGDQDGTFSITTDPNTNDGILRTAKGLDYETRNRYDLVVTVENKVPLSVSLGLSSASVLVLVRDVNEPPVFVPPVKRVEVPEDLPVGHEVASYTAQDPDKDQRNRITYRMGSDPAGWLAIDPENGIVTAAQPLDRESVHAINSTYKAIVLAVDNGVPDATGTGTLLLLLQDVNDNGPTPEPRIFDICSRQPEDQTLTIVDKDLPPNTYPFQAALEHGSGTNWTVEIFGQDSLVLKLKKELEPGEYSIFLKLTDSQGKAQMTEVKAQVCDCEGAAENCEQRAFTATAIVNIRDAISNVPIFSFTMVGGTERPQGSLTTHVLNTATGLPAARLALRLAQLQEPGAQWRELAQRWTDEDGRCLPLLPPGQAKAGTYKLHFETAAYWESLGYSSFYPFVEVVFTITDPTQKLHVPLLISPYSYTTYRGS
SIO_010081: LOC106020320
subclass of: SO_0000673
so part of: LOC106020320
location: join(1318763..1318810,1318918..1319061,1319199..1319354,1319426..1319570,1319695..1319871,1319954..1320082,1320178..1320363,1320453..1320697,1320804..1320946,1321048..1321272,1321509..1321732,1323203..1323342,1323451..1323586,1323817..1323907)
location: region:1318763-1323907:1
so has part: feature:1318763-1318810:1:exon
so has part: feature:1318918-1319061:1:exon
so has part: feature:1319199-1319354:1:exon
so has part: feature:1319426-1319570:1:exon
so has part: feature:1319695-1319871:1:exon
so has part: feature:1319954-1320082:1:exon
so has part: feature:1320178-1320363:1:exon
so has part: feature:1320453-1320697:1:exon
so has part: feature:1320804-1320946:1:exon
so has part: feature:1321048-1321272:1:exon
so has part: feature:1321509-1321732:1:exon
so has part: feature:1323203-1323342:1:exon
so has part: feature:1323451-1323586:1:exon
so has part: feature:1323817-1323907:1:exon

XP_038041264.1
type: Protein
SIO_000068: ncbiprotein

position:1318763:1
position: 1318763
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1323907:1
position: 1323907
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1318763-1318810:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1318918-1319061:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1319199-1319354:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1319426-1319570:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1319695-1319871:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1319954-1320082:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1320178-1320363:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1320453-1320697:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1320804-1320946:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1321048-1321272:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1321509-1321732:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1323203-1323342:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1323451-1323586:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1323817-1323907:1:exon

GAS8
type: Gene
subclass of: SO_0000704
RO_0002162: 8839
gene: GAS8
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1323988..1331686)
location: region:1323988-1331686:-1
so has part: feature:1323988-1331686:-1:exon
subclass of: SO_0000010

101803735
type: Gene
SIO_000068: ncbigene

position:1323988:-1
position: 1323988
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1331686:-1
position: 1331686
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1323988-1331686:-1:exon

GAS8
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8839
gene: GAS8
product: growth arrest specific 8, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 30 samples with support for all annotated introns
transcript id: XM_038185339.1
SIO_010081: GAS8
subclass of: SO_0000673
so part of: GAS8
location: complement(join(1323988..1324256,1324520..1324585,1327443..1327529,1327892..1328059,1328318..1328523,1329054..1329108,1329646..1329852,1330022..1330219,1331043..1331132,1331457..1331686))
location: region:1323988-1331686:-1
so has part: feature:1331457-1331686:-1:exon
so has part: feature:1331043-1331132:-1:exon
so has part: feature:1330022-1330219:-1:exon
so has part: feature:1329646-1329852:-1:exon
so has part: feature:1329054-1329108:-1:exon
so has part: feature:1328318-1328523:-1:exon
so has part: feature:1327892-1328059:-1:exon
so has part: feature:1327443-1327529:-1:exon
so has part: feature:1324520-1324585:-1:exon
so has part: feature:1323988-1324256:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1331457-1331686:-1:exon

position:1331457:-1
position: 1331457
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1331043-1331132:-1:exon

position:1331043:-1
position: 1331043
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1331132:-1
position: 1331132
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1330022-1330219:-1:exon

position:1330022:-1
position: 1330022
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1330219:-1
position: 1330219
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1329646-1329852:-1:exon

position:1329646:-1
position: 1329646
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1329852:-1
position: 1329852
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1329054-1329108:-1:exon

position:1329054:-1
position: 1329054
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1329108:-1
position: 1329108
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1328318-1328523:-1:exon

position:1328318:-1
position: 1328318
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1328523:-1
position: 1328523
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1327892-1328059:-1:exon

position:1327892:-1
position: 1327892
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1328059:-1
position: 1328059
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1327443-1327529:-1:exon

position:1327443:-1
position: 1327443
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1327529:-1
position: 1327529
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:1324520-1324585:-1:exon

position:1324520:-1
position: 1324520
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1324585:-1
position: 1324585
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:1323988-1324256:-1:exon

position:1324256:-1
position: 1324256
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

GAS8
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8839
gene: GAS8
product: growth arrest specific 8, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 124 samples with support for all annotated introns
transcript id: XM_038185338.1
SIO_010081: GAS8
subclass of: SO_0000673
so part of: GAS8
location: complement(join(1323988..1324256,1324520..1324585,1326043..1326252,1327443..1327529,1327892..1328059,1328318..1328523,1329054..1329108,1329646..1329852,1330022..1330219,1331043..1331132,1331457..1331684))
location: region:1323988-1331684:-1
so has part: feature:1331457-1331684:-1:exon
so has part: feature:1331043-1331132:-1:exon
so has part: feature:1330022-1330219:-1:exon
so has part: feature:1329646-1329852:-1:exon
so has part: feature:1329054-1329108:-1:exon
so has part: feature:1328318-1328523:-1:exon
so has part: feature:1327892-1328059:-1:exon
so has part: feature:1327443-1327529:-1:exon
so has part: feature:1326043-1326252:-1:exon
so has part: feature:1324520-1324585:-1:exon
so has part: feature:1323988-1324256:-1:exon

position:1331684:-1
position: 1331684
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1331457-1331684:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1331043-1331132:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1330022-1330219:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1329646-1329852:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1329054-1329108:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1328318-1328523:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1327892-1328059:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1327443-1327529:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1326043-1326252:-1:exon

position:1326043:-1
position: 1326043
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1326252:-1
position: 1326252
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:1324520-1324585:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1323988-1324256:-1:exon

GAS8
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8839
gene: GAS8
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: dynein regulatory complex subunit 4 isoform X2
translation: MAPKKAVKKGKGGKAPAVVDASAPEEMSREQLGQHVVRLREELDREREERNYFQLERDKIHTFWEITRRQLEEKKAELRNKDREMEEAEERHQVEIKVYKQKVKHLLYEHQENLTELKAEGTVSMRRAQKDHWAQEMELRKDMRSLKVELKEQELANEVVVKNMRLKQEEEITRLCNDFERQVKEIEAKYNKKMQMLRDELDLRRKTEIHEVEERKNNQISELMKNHEKAFSEIKNYYNDITLKNLALINLLKEQMEERKKRENQLEKEKADLLLHKKQQQETLQQTQEQVFEMQKKLAHYDMDKEALTNTKARLKVIQKELKDLQWEHEVLEQRFSKDVLGSKNTTIEDLQFQLARVCKAHNDMLQTLEAKLTAFGIPLDNLGFKPLESPVLGQALGQGPAGLVAVPT
SIO_010081: GAS8
subclass of: SO_0000673
so part of: GAS8
location: complement(join(1324107..1324256,1324520..1324585,1327443..1327529,1327892..1328059,1328318..1328523,1329054..1329108,1329646..1329852,1330022..1330219,1331043..1331132,1331457..1331459))
location: region:1324107-1331459:-1
so has part: feature:1331457-1331459:-1:exon
so has part: feature:1331043-1331132:-1:exon
so has part: feature:1330022-1330219:-1:exon
so has part: feature:1329646-1329852:-1:exon
so has part: feature:1329054-1329108:-1:exon
so has part: feature:1328318-1328523:-1:exon
so has part: feature:1327892-1328059:-1:exon
so has part: feature:1327443-1327529:-1:exon
so has part: feature:1324520-1324585:-1:exon
so has part: feature:1324107-1324256:-1:exon

XP_038041267.1
type: Protein
SIO_000068: ncbiprotein

position:1324107:-1
position: 1324107
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1331459:-1
position: 1331459
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1331457-1331459:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1331043-1331132:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1330022-1330219:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1329646-1329852:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1329054-1329108:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1328318-1328523:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1327892-1328059:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1327443-1327529:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1324520-1324585:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1324107-1324256:-1:exon

GAS8
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8839
gene: GAS8
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: dynein regulatory complex subunit 4 isoform X1
translation: MAPKKAVKKGKGGKAPAVVDASAPEEMSREQLGQHVVRLREELDREREERNYFQLERDKIHTFWEITRRQLEEKKAELRNKDREMEEAEERHQVEIKVYKQKVKHLLYEHQENLTELKAEGTVSMRRAQKDHWAQEMELRKDMRSLKVELKEQELANEVVVKNMRLKQEEEITRLCNDFERQVKEIEAKYNKKMQMLRDELDLRRKTEIHEVEERKNNQISELMKNHEKAFSEIKNYYNDITLKNLALINLLKEQMEERKKRENQLEKEKADLLLHKKQQQETLQQTQEQVFEMQKKLAHYDMDKEALTNTKARLKVIQKELKDLQWEHEVLEQRFSKVQAERDELYQKFTKAINEVQQKTGFKNLLLERKLKGLLDVLEKKEVELSEVFAASNLDPGALSLVSQKLEDVLGSKNTTIEDLQFQLARVCKAHNDMLQTLEAKLTAFGIPLDNLGFKPLESPVLGQALGQGPAGLVAVPT
SIO_010081: GAS8
subclass of: SO_0000673
so part of: GAS8
location: complement(join(1324107..1324256,1324520..1324585,1326043..1326252,1327443..1327529,1327892..1328059,1328318..1328523,1329054..1329108,1329646..1329852,1330022..1330219,1331043..1331132,1331457..1331459))
location: region:1324107-1331459:-1
so has part: feature:1331457-1331459:-1:exon
so has part: feature:1331043-1331132:-1:exon
so has part: feature:1330022-1330219:-1:exon
so has part: feature:1329646-1329852:-1:exon
so has part: feature:1329054-1329108:-1:exon
so has part: feature:1328318-1328523:-1:exon
so has part: feature:1327892-1328059:-1:exon
so has part: feature:1327443-1327529:-1:exon
so has part: feature:1326043-1326252:-1:exon
so has part: feature:1324520-1324585:-1:exon
so has part: feature:1324107-1324256:-1:exon

XP_038041266.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1331457-1331459:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1331043-1331132:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1330022-1330219:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1329646-1329852:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1329054-1329108:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1328318-1328523:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1327892-1328059:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1327443-1327529:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1326043-1326252:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1324520-1324585:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1324107-1324256:-1:exon

DBNDD1
type: Gene
subclass of: SO_0000704
RO_0002162: 8839
gene: DBNDD1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1331975..1334811
location: region:1331975-1334811:1
so has part: feature:1331975-1334811:1:exon
subclass of: SO_0000010

113844874
type: Gene
SIO_000068: ncbigene

position:1331975:1
position: 1331975
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1334811:1
position: 1334811
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1331975-1334811:1:exon

DBNDD1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8839
gene: DBNDD1
product: dysbindin domain containing 1, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 106 samples with support for all annotated introns
transcript id: XM_038185341.1
SIO_010081: DBNDD1
subclass of: SO_0000673
so part of: DBNDD1
location: join(1331975..1332135,1333735..1333881,1334012..1334811)
location: region:1331975-1334811:1
so has part: feature:1331975-1332135:1:exon
so has part: feature:1333735-1333881:1:exon
so has part: feature:1334012-1334811:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1331975-1332135:1:exon

position:1332135:1
position: 1332135
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1333735-1333881:1:exon

position:1333735:1
position: 1333735
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1333881:1
position: 1333881
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1334012-1334811:1:exon

position:1334012:1
position: 1334012
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

DBNDD1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8839
gene: DBNDD1
product: dysbindin domain containing 1, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 93 samples with support for all annotated introns
transcript id: XM_038185342.1
SIO_010081: DBNDD1
subclass of: SO_0000673
so part of: DBNDD1
location: join(1331975..1332135,1333735..1333881,1334012..1334152,1334225..1334811)
location: region:1331975-1334811:1
so has part: feature:1331975-1332135:1:exon
so has part: feature:1333735-1333881:1:exon
so has part: feature:1334012-1334152:1:exon
so has part: feature:1334225-1334811:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1331975-1332135:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1333735-1333881:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1334012-1334152:1:exon

position:1334152:1
position: 1334152
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1334225-1334811:1:exon

position:1334225:1
position: 1334225
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

DBNDD1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8839
gene: DBNDD1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: dysbindin domain-containing protein 1 isoform X1
translation: MEAPGAGGTAELGKETLAPERTAGTPIPGTAEETPDIPVEEQGGIPIPTASLLQVTERRQPLSSVSSLEVHFDLLDLTELTDMSDQELAEVFADSDEENAAGESPSGDFEPPPSRCRPHGGARAEPAVPAGLHPQAMPRAGYLRSPSWTRAREQGRDKKHLSDSELQPGAVDAFLAVERPQQE
SIO_010081: DBNDD1
subclass of: SO_0000673
so part of: DBNDD1
location: join(1332105..1332135,1333735..1333881,1334012..1334385)
location: region:1332105-1334385:1
so has part: feature:1332105-1332135:1:exon
so has part: feature:1333735-1333881:1:exon
so has part: feature:1334012-1334385:1:exon

XP_038041269.1
type: Protein
SIO_000068: ncbiprotein

position:1332105:1
position: 1332105
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1334385:1
position: 1334385
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1332105-1332135:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1333735-1333881:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1334012-1334385:1:exon

DBNDD1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8839
gene: DBNDD1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: dysbindin domain-containing protein 1 isoform X2
translation: MEAPGAGGTAELGKETLAPERTAGTPIPGTAEETPDIPVEEQGGIPIPTASLLQVTERRQPLSSVSSLEVHFDLLDLTELTDMSDQELAEVFADSDEENAAGESPSGLHPQAMPRAGYLRSPSWTRAREQGRDKKHLSDSELQPGAVDAFLAVERPQQE
SIO_010081: DBNDD1
subclass of: SO_0000673
so part of: DBNDD1
location: join(1332105..1332135,1333735..1333881,1334012..1334152,1334225..1334385)
location: region:1332105-1334385:1
so has part: feature:1332105-1332135:1:exon
so has part: feature:1333735-1333881:1:exon
so has part: feature:1334012-1334152:1:exon
so has part: feature:1334225-1334385:1:exon

XP_038041270.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1332105-1332135:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1333735-1333881:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1334012-1334152:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1334225-1334385:1:exon

DEF8
type: Gene
subclass of: SO_0000704
RO_0002162: 8839
gene: DEF8
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1335071..1339221)
location: region:1335071-1339221:-1
so has part: feature:1335071-1339221:-1:exon
subclass of: SO_0000010

101804126
type: Gene
SIO_000068: ncbigene

position:1335071:-1
position: 1335071
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1339221:-1
position: 1339221
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1335071-1339221:-1:exon

DEF8
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8839
gene: DEF8
product: differentially expressed in FDCP 8 homolog
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 9 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 122 samples with support for all annotated introns
transcript id: XM_038185340.1
SIO_010081: DEF8
subclass of: SO_0000673
so part of: DEF8
location: complement(join(1335071..1335723,1335845..1335954,1336095..1336235,1336336..1336416,1336756..1336869,1337057..1337184,1337270..1337434,1337507..1337648,1338681..1338830,1338911..1339221))
location: region:1335071-1339221:-1
so has part: feature:1338911-1339221:-1:exon
so has part: feature:1338681-1338830:-1:exon
so has part: feature:1337507-1337648:-1:exon
so has part: feature:1337270-1337434:-1:exon
so has part: feature:1337057-1337184:-1:exon
so has part: feature:1336756-1336869:-1:exon
so has part: feature:1336336-1336416:-1:exon
so has part: feature:1336095-1336235:-1:exon
so has part: feature:1335845-1335954:-1:exon
so has part: feature:1335071-1335723:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1338911-1339221:-1:exon

position:1338911:-1
position: 1338911
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1338681-1338830:-1:exon

position:1338681:-1
position: 1338681
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1338830:-1
position: 1338830
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1337507-1337648:-1:exon

position:1337507:-1
position: 1337507
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1337648:-1
position: 1337648
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1337270-1337434:-1:exon

position:1337270:-1
position: 1337270
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1337434:-1
position: 1337434
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1337057-1337184:-1:exon

position:1337057:-1
position: 1337057
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1337184:-1
position: 1337184
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1336756-1336869:-1:exon

position:1336756:-1
position: 1336756
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1336869:-1
position: 1336869
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1336336-1336416:-1:exon

position:1336336:-1
position: 1336336
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1336416:-1
position: 1336416
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1336095-1336235:-1:exon

position:1336095:-1
position: 1336095
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1336235:-1
position: 1336235
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:1335845-1335954:-1:exon

position:1335845:-1
position: 1335845
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1335954:-1
position: 1335954
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:1335071-1335723:-1:exon

position:1335723:-1
position: 1335723
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

DEF8
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8839
gene: DEF8
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: differentially expressed in FDCP 8 homolog
translation: MAYDEKLARFRQAHLNPFNKGPENPTGGGGAEEPPPGAPPSVARRPEPCPGDAESPEPPMDLGLAEDHFSRPVGLILAPDVRQLRRAIEECKRAILALPEHSERQKDAVVRLIHLRLKLQELQDPDEEEPNIRVVLEHRFYKEKSKSVKQTCDKCSTIIWGLIQTWYTCTGCYYRCHSKCLPLVTKPCVRSKVSHQAEYQLSICPESGLDSQDYRCAECRAPIALRGVPSEARQCDYTGLYYCSSCHWNDLAVVPARAIHNWDFEPRKVSRCSMRYLALMVSRPVLKLREINPLLFNYVEELVEIRKLRQDILLMKPYFITCKEAMEARLLLQLQDRQHFVENDEMYSLQDLIDIEAGRLSCSLTEIHTLFAKHIKLDCERCQAKGFVCELCKEGDVLFPFDSHTSVCTDCSAVFHRDCYYDNSTTCPKCARLSLRKQSLFQDSVAEAEP
SIO_010081: DEF8
subclass of: SO_0000673
so part of: DEF8
location: complement(join(1335621..1335723,1335845..1335954,1336095..1336235,1336336..1336416,1336756..1336869,1337057..1337184,1337270..1337434,1337507..1337648,1338681..1338830,1338911..1339129))
location: region:1335621-1339129:-1
so has part: feature:1338911-1339129:-1:exon
so has part: feature:1338681-1338830:-1:exon
so has part: feature:1337507-1337648:-1:exon
so has part: feature:1337270-1337434:-1:exon
so has part: feature:1337057-1337184:-1:exon
so has part: feature:1336756-1336869:-1:exon
so has part: feature:1336336-1336416:-1:exon
so has part: feature:1336095-1336235:-1:exon
so has part: feature:1335845-1335954:-1:exon
so has part: feature:1335621-1335723:-1:exon

XP_038041268.1
type: Protein
SIO_000068: ncbiprotein

position:1335621:-1
position: 1335621
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1339129:-1
position: 1339129
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1338911-1339129:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1338681-1338830:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1337507-1337648:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1337270-1337434:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1337057-1337184:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1336756-1336869:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1336336-1336416:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1336095-1336235:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1335845-1335954:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1335621-1335723:-1:exon

TUBB3
type: Gene
subclass of: SO_0000704
RO_0002162: 8839
gene: TUBB3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1339666..1342518)
location: region:1339666-1342518:-1
so has part: feature:1339666-1342518:-1:exon
subclass of: SO_0000010

113844802
type: Gene
SIO_000068: ncbigene

position:1339666:-1
position: 1339666
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1342518:-1
position: 1342518
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1339666-1342518:-1:exon

TUBB3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8839
gene: TUBB3
product: tubulin beta 3 class III
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 38 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 81 samples with support for all annotated introns
transcript id: XM_027465875.2
SIO_010081: TUBB3
subclass of: SO_0000673
so part of: TUBB3
location: complement(join(1339666..1340978,1341215..1341325,1341775..1341883,1342361..1342518))
location: region:1339666-1342518:-1
so has part: feature:1342361-1342518:-1:exon
so has part: feature:1341775-1341883:-1:exon
so has part: feature:1341215-1341325:-1:exon
so has part: feature:1339666-1340978:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1342361-1342518:-1:exon

position:1342361:-1
position: 1342361
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1341775-1341883:-1:exon

position:1341775:-1
position: 1341775
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1341883:-1
position: 1341883
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1341215-1341325:-1:exon

position:1341215:-1
position: 1341215
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1341325:-1
position: 1341325
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1339666-1340978:-1:exon

position:1340978:-1
position: 1340978
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

TUBB3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8839
gene: TUBB3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: tubulin beta-3 chain
translation: MREIVHIQAGQCGNQIGAKFWEVISDEHGIDPSGNYVGDSDLQLERISVYYNEASSHKYVPRAILVDLEPGTMDSVRSGAFGHLFRPDNFIFGQSGAGNNWAKGHYTEGAELVDSVLDVVRKECENCDCLQGFQLTHSLGGGTGSGMGTLLISKVREEYPDRIMNTFSVVPSPKVSDTVVEPYNATLSIHQLVENTDETYCIDNEALYDICFRTLKLATPTYGDLNHLVSATMSGVTTSLRFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTARGSQQYRALTVPELTQQMFDAKNMMAACDPRHGRYLTVATVFRGRMSMKEVDEQMLAIQSKNSSYFVEWIPNNVKVAVCDIPPRGLKMSSTFIGNSTAIQELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQDATAEEEGEMYEDDEEESEAQGAK
SIO_010081: TUBB3
subclass of: SO_0000673
so part of: TUBB3
location: complement(join(1339903..1340978,1341215..1341325,1341775..1341883,1342361..1342417))
location: region:1339903-1342417:-1
so has part: feature:1342361-1342417:-1:exon
so has part: feature:1341775-1341883:-1:exon
so has part: feature:1341215-1341325:-1:exon
so has part: feature:1339903-1340978:-1:exon

XP_027321676.1
type: Protein
SIO_000068: ncbiprotein

position:1339903:-1
position: 1339903
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1342417:-1
position: 1342417
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1342361-1342417:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1341775-1341883:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1341215-1341325:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1339903-1340978:-1:exon

MC1R
type: Gene
subclass of: SO_0000704
RO_0002162: 8839
gene: MC1R
note: melanocortin 1 receptor; Derived by automated computational analysis using gene prediction method: BestRefSeq.
so part of: sequence
location: complement(1343350..1344482)
location: region:1343350-1344482:-1
so has part: feature:1343350-1344482:-1:exon
subclass of: SO_0000010

101796989
type: Gene
SIO_000068: ncbigene

position:1343350:-1
position: 1343350
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1344482:-1
position: 1344482
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1343350-1344482:-1:exon

MC1R
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8839
gene: MC1R
product: melanocortin 1 receptor
inference: similar to RNA sequence, mRNA (same species):RefSeq:NM_001310805.1
exception: annotated by transcript or proteomic data
note: The RefSeq transcript has 2 substitutions, 3 non-frameshifting indels compared to this genomic sequence; Derived by automated computational analysis using gene prediction method: BestRefSeq.
transcript id: NM_001310805.1
SIO_010081: MC1R
subclass of: SO_0000673
so part of: MC1R
location: complement(1343350..1344482)
location: region:1343350-1344482:-1
so has part: feature:1343350-1344482:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1343350-1344482:-1:exon

MC1R
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8839
gene: MC1R
note: Derived by automated computational analysis using gene prediction method: BestRefSeq.
codon start: 1
product: melanocyte-stimulating hormone receptor
translation: MSTLAPLRLLREPWNASKGNQSNATAGAGGAWCQGLDVPNELFLTLGLVSLVENLLVVAAILKNRNLHSPMYYFICCLAVSDMLVSVSNLAETLFMLLMEHGVLVIHASIIRHMDNIIDMLICSSIVSSLSFLGVIAVDRYITIFYALRYHSIMTLQRAVVTMASVWLASTVSSTVFITYYRNNAILLCLIGFFLFMLILMLVLYIHMFALARHHLRSISSQQKHPAVYRTSSLKGAVTLTILLGVFFICWGPFFFHLILIVTCPTNPFCTCFFGYFNLFLILIICNSVVDPLIYAFRSQELRRTLREVVLCSW
SIO_010081: MC1R
subclass of: SO_0000673
so part of: MC1R
location: complement(1343480..1344424)
location: region:1343480-1344424:-1
so has part: feature:1343480-1344424:-1:exon

NP_001297734.1
type: Protein
SIO_000068: ncbiprotein

position:1343480:-1
position: 1343480
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1344424:-1
position: 1344424
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1343480-1344424:-1:exon

TCF25
type: Gene
subclass of: SO_0000704
RO_0002162: 8839
gene: TCF25
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1346692..1363958)
location: region:1346692-1363958:-1
so has part: feature:1346692-1363958:-1:exon
subclass of: SO_0000010

101798802
type: Gene
SIO_000068: ncbigene

position:1346692:-1
position: 1346692
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1363958:-1
position: 1363958
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1346692-1363958:-1:exon

TCF25
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8839
gene: TCF25
product: transcription factor 25
exception: unclassified transcription discrepancy
note: The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: deleted 2 bases in 2 codons; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 96% coverage of the annotated genomic feature by RNAseq alignments, including 126 samples with support for all annotated introns
transcript id: XM_038185337.1
SIO_010081: TCF25
subclass of: SO_0000673
so part of: TCF25
location: complement(join(1346692..1346937,1347174..1347246,1347857..1347936,1348264..1348354,1348810..1348968,1349527..1349614,1350689..1350848,1351265..1351370,1352014..1352106,1353172..1353266,1353946..1354045,1355817..1355947,1356040..1356122,1357213..1357278,1358792..1358916,1360820..1360895,1362734..1362901,1363761..1363958))
location: region:1346692-1363958:-1
so has part: feature:1363761-1363958:-1:exon
so has part: feature:1362734-1362901:-1:exon
so has part: feature:1360820-1360895:-1:exon
so has part: feature:1358792-1358916:-1:exon
so has part: feature:1357213-1357278:-1:exon
so has part: feature:1356040-1356122:-1:exon
so has part: feature:1355817-1355947:-1:exon
so has part: feature:1353946-1354045:-1:exon
so has part: feature:1353172-1353266:-1:exon
so has part: feature:1352014-1352106:-1:exon
so has part: feature:1351265-1351370:-1:exon
so has part: feature:1350689-1350848:-1:exon
so has part: feature:1349527-1349614:-1:exon
so has part: feature:1348810-1348968:-1:exon
so has part: feature:1348264-1348354:-1:exon
so has part: feature:1347857-1347936:-1:exon
so has part: feature:1347174-1347246:-1:exon
so has part: feature:1346692-1346937:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1363761-1363958:-1:exon

position:1363761:-1
position: 1363761
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1362734-1362901:-1:exon

position:1362734:-1
position: 1362734
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1362901:-1
position: 1362901
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1360820-1360895:-1:exon

position:1360820:-1
position: 1360820
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1360895:-1
position: 1360895
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1358792-1358916:-1:exon

position:1358792:-1
position: 1358792
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1358916:-1
position: 1358916
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1357213-1357278:-1:exon

position:1357213:-1
position: 1357213
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1357278:-1
position: 1357278
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1356040-1356122:-1:exon

position:1356040:-1
position: 1356040
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1356122:-1
position: 1356122
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1355817-1355947:-1:exon

position:1355817:-1
position: 1355817
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1355947:-1
position: 1355947
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1353946-1354045:-1:exon

position:1353946:-1
position: 1353946
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1354045:-1
position: 1354045
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:1353172-1353266:-1:exon

position:1353172:-1
position: 1353172
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1353266:-1
position: 1353266
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:1352014-1352106:-1:exon

position:1352014:-1
position: 1352014
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1352106:-1
position: 1352106
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:1351265-1351370:-1:exon

position:1351265:-1
position: 1351265
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1351370:-1
position: 1351370
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:1350689-1350848:-1:exon

position:1350689:-1
position: 1350689
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1350848:-1
position: 1350848
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:1349527-1349614:-1:exon

position:1349527:-1
position: 1349527
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1349614:-1
position: 1349614
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:1348810-1348968:-1:exon

position:1348810:-1
position: 1348810
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1348968:-1
position: 1348968
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:1348264-1348354:-1:exon

position:1348264:-1
position: 1348264
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1348354:-1
position: 1348354
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:1347857-1347936:-1:exon

position:1347857:-1
position: 1347857
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1347936:-1
position: 1347936
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:1347174-1347246:-1:exon

position:1347174:-1
position: 1347174
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1347246:-1
position: 1347246
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:1346692-1346937:-1:exon

position:1346937:-1
position: 1346937
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

TCF25
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8839
gene: TCF25
exception: unclassified translation discrepancy
note: The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: deleted 2 bases in 2 codons; Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: LOW QUALITY PROTEIN: transcription factor 25
translation: MSRRALRRLRGEQRGQQEPGLGELGPADGPENGQQRQEGVVRGRRGVSNRFELITSEELEDDLPSKEERADTRLKEHGVAERNDEESVPEEREGDGQRNGEEAERPDQTPVLSNKPRKKKKKRKSKKASAGEALEDNDLEDIDSLLEKIEDTNGILQETQSGVIVDSRPLLYVEHRNLNPENELKRYFGARAVLGDQRPRQRQRQYVRSTWLTVPKNTWPRYSKTGIAMQLVETRRGVQYFTFEHHREYQQVQFKFLDAVESMDPNNIVLLLQMNPYHVDSLLQLSDVCRMQEDQEMARDLIERVLYSLECAFHPVFSLTSGSCRLDYRRPENRAFFLALFKHLMFLEKRGCPRTALEFCKLILSLDPENDPLCVLLMIDFLSLRAREYTFLTRMFEEWESHRNLSQLPNFAFSVPLAYFFLSQQEEHSEMESSQTRERAARLIQLALIMFPSVLMPLLDHCSVQPDARVASHSFFGLNAQISQPPALNQLTSLYVGRTHSLWKDPAVMAWLETNVHEVLHLVDIRDPLVEECELKRKMRYQSAPRNIYRHVILSEMKEATAALPLEVTSQPVMGFDPLPPLDSIISYTRPERTNHPSNESTLSLFFRSLLPNFNLQGDIRHDGDDEAGAGQDLNQGVNRLMAAMRDMLANIQFQEPPRDDNPEGDGDWD
SIO_010081: TCF25
subclass of: SO_0000673
so part of: TCF25
location: complement(join(1346776..1346937,1347174..1347246,1347857..1347936,1348264..1348354,1348810..1348968,1349527..1349614,1350689..1350848,1351265..1351370,1352014..1352106,1353172..1353266,1353946..1354045,1355817..1355947,1356040..1356122,1357213..1357278,1358792..1358916,1360820..1360895,1362734..1362901,1363761..1363919))
location: region:1346776-1363919:-1
so has part: feature:1363761-1363919:-1:exon
so has part: feature:1362734-1362901:-1:exon
so has part: feature:1360820-1360895:-1:exon
so has part: feature:1358792-1358916:-1:exon
so has part: feature:1357213-1357278:-1:exon
so has part: feature:1356040-1356122:-1:exon
so has part: feature:1355817-1355947:-1:exon
so has part: feature:1353946-1354045:-1:exon
so has part: feature:1353172-1353266:-1:exon
so has part: feature:1352014-1352106:-1:exon
so has part: feature:1351265-1351370:-1:exon
so has part: feature:1350689-1350848:-1:exon
so has part: feature:1349527-1349614:-1:exon
so has part: feature:1348810-1348968:-1:exon
so has part: feature:1348264-1348354:-1:exon
so has part: feature:1347857-1347936:-1:exon
so has part: feature:1347174-1347246:-1:exon
so has part: feature:1346776-1346937:-1:exon

XP_038041265.1
type: Protein
SIO_000068: ncbiprotein

position:1346776:-1
position: 1346776
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1363919:-1
position: 1363919
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1363761-1363919:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1362734-1362901:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1360820-1360895:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1358792-1358916:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1357213-1357278:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1356040-1356122:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1355817-1355947:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1353946-1354045:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1353172-1353266:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1352014-1352106:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1351265-1351370:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1350689-1350848:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1349527-1349614:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1348810-1348968:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1348264-1348354:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1347857-1347936:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1347174-1347246:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:1346776-1346937:-1:exon

SPIRE2
type: Gene
subclass of: SO_0000704
RO_0002162: 8839
gene: SPIRE2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1365492..1372984)
location: region:1365492-1372984:-1
so has part: feature:1365492-1372984:-1:exon
subclass of: SO_0000010

113844880
type: Gene
SIO_000068: ncbigene

position:1365492:-1
position: 1365492
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1372984:-1
position: 1372984
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1365492-1372984:-1:exon

SPIRE2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8839
gene: SPIRE2
product: spire type actin nucleation factor 2, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 7 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 31 samples with support for all annotated introns
transcript id: XM_027466399.2
SIO_010081: SPIRE2
subclass of: SO_0000673
so part of: SPIRE2
location: complement(join(1365492..1366045,1366148..1366263,1366434..1366461,1366588..1366655,1366731..1366865,1366989..1367122,1367364..1367526,1367630..1367799,1367911..1368034,1368156..1368242,1368340..1368504,1368583..1368663,1368842..1369201,1369404..1369441,1371981..1372984))
location: region:1365492-1372984:-1
so has part: feature:1371981-1372984:-1:exon
so has part: feature:1369404-1369441:-1:exon
so has part: feature:1368842-1369201:-1:exon
so has part: feature:1368583-1368663:-1:exon
so has part: feature:1368340-1368504:-1:exon
so has part: feature:1368156-1368242:-1:exon
so has part: feature:1367911-1368034:-1:exon
so has part: feature:1367630-1367799:-1:exon
so has part: feature:1367364-1367526:-1:exon
so has part: feature:1366989-1367122:-1:exon
so has part: feature:1366731-1366865:-1:exon
so has part: feature:1366588-1366655:-1:exon
so has part: feature:1366434-1366461:-1:exon
so has part: feature:1366148-1366263:-1:exon
so has part: feature:1365492-1366045:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1371981-1372984:-1:exon

position:1371981:-1
position: 1371981
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1369404-1369441:-1:exon

position:1369404:-1
position: 1369404
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1369441:-1
position: 1369441
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1368842-1369201:-1:exon

position:1368842:-1
position: 1368842
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1369201:-1
position: 1369201
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1368583-1368663:-1:exon

position:1368583:-1
position: 1368583
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1368663:-1
position: 1368663
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1368340-1368504:-1:exon

position:1368340:-1
position: 1368340
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1368504:-1
position: 1368504
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1368156-1368242:-1:exon

position:1368156:-1
position: 1368156
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1368242:-1
position: 1368242
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1367911-1368034:-1:exon

position:1367911:-1
position: 1367911
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1368034:-1
position: 1368034
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1367630-1367799:-1:exon

position:1367630:-1
position: 1367630
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1367799:-1
position: 1367799
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:1367364-1367526:-1:exon

position:1367364:-1
position: 1367364
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1367526:-1
position: 1367526
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:1366989-1367122:-1:exon

position:1366989:-1
position: 1366989
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1367122:-1
position: 1367122
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:1366731-1366865:-1:exon

position:1366731:-1
position: 1366731
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1366865:-1
position: 1366865
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:1366588-1366655:-1:exon

position:1366588:-1
position: 1366588
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1366655:-1
position: 1366655
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:1366434-1366461:-1:exon

position:1366434:-1
position: 1366434
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1366461:-1
position: 1366461
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:1366148-1366263:-1:exon

position:1366148:-1
position: 1366148
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1366263:-1
position: 1366263
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:1365492-1366045:-1:exon

position:1366045:-1
position: 1366045
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

SPIRE2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8839
gene: SPIRE2
product: spire type actin nucleation factor 2, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 20 samples with support for all annotated introns
transcript id: XM_027466398.2
SIO_010081: SPIRE2
subclass of: SO_0000673
so part of: SPIRE2
location: complement(join(1365492..1366045,1366148..1366263,1366434..1366461,1366588..1366655,1366731..1366865,1366989..1367122,1367301..1367526,1367630..1367799,1367911..1368034,1368156..1368242,1368340..1368504,1368583..1368663,1368842..1369201,1369404..1369441,1371981..1372984))
location: region:1365492-1372984:-1
so has part: feature:1371981-1372984:-1:exon
so has part: feature:1369404-1369441:-1:exon
so has part: feature:1368842-1369201:-1:exon
so has part: feature:1368583-1368663:-1:exon
so has part: feature:1368340-1368504:-1:exon
so has part: feature:1368156-1368242:-1:exon
so has part: feature:1367911-1368034:-1:exon
so has part: feature:1367630-1367799:-1:exon
so has part: feature:1367301-1367526:-1:exon
so has part: feature:1366989-1367122:-1:exon
so has part: feature:1366731-1366865:-1:exon
so has part: feature:1366588-1366655:-1:exon
so has part: feature:1366434-1366461:-1:exon
so has part: feature:1366148-1366263:-1:exon
so has part: feature:1365492-1366045:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1371981-1372984:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1369404-1369441:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1368842-1369201:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1368583-1368663:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1368340-1368504:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1368156-1368242:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1367911-1368034:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1367630-1367799:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1367301-1367526:-1:exon

position:1367301:-1
position: 1367301
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:1366989-1367122:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1366731-1366865:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1366588-1366655:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1366434-1366461:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1366148-1366263:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1365492-1366045:-1:exon

SPIRE2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8839
gene: SPIRE2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protein spire homolog 2 isoform X2
translation: MHPTCTHAPCTLHPTVSCTLYAAVPCTLHPAAPCTLHAAASSALFCAPCAPHPPRTPHAAHPACALRPAPPALSAPRTLRPCTLHAPCAQPRLSPPILAPRQLAGPYRAVLNRAVLNRATPNRTAPHRTEPPQHRAPRAVATREEPATGAAQLRAERGRAEPLPPQTPPPLPPRPCGGGRRRRRRRRRRRGRGDGAMARAGGGAPRELSLEEVLKCYEQPLNEEQAWALCFQGCRAAAAAPAAPPRTADILLRADGTVGLPAPPPELPLLLTPAAEAQMVQSLGFAIYRALDWGLDENEERELSPQLEQLIDLMTNSDSEDSGCGTADEGYGGQEEEEEGGEGPPRAVRTFGQAMRCCAARLADPAEAQAHYQAVCRALFAETVELKAFLAKIRDAKEMLQKLNEDEEAKERPSAELGSLRNTDWARLWVQLMRELRHGVKLKKVQEKQFNPLPTEYQLTPFEMLMQDIRARNYKLRKVMVDGDIPPRVKKDAHELILDFIRSRPPLKQASERRLRPLPQKQRTLHEKILEEIKQERKLRPVETQYRGQKGYSSLPCIPHACSSHLTSSSCIDLSAPEASTVPPRPRPRVLLKAPTLAEMEEMNISEEEDSPGTEPGLGLPMKRDRSFSEQDLAQFQSELSSSQAAPEVLGPLEPEPRPRSGSVPASYHPVPYGSAPPRAALGSVEERPEDGPSAAPSSSSKHLWLEFSHPVESLALTVEEMINVRRVLVKAEMEKFQQSKELYNSLKKGKVCCCCRTKFPLFSWPSACLFCKRSVCTSCSLKMKMPSKKLAHIPVYALGFESLPGSLLAKALPLRRRETFHSLQGPGWRRVEEEFPHIYAQGSVLRDVCSDCSGFVTDVVCSSRRSVAVLNAAPRRAARCESWYK
SIO_010081: SPIRE2
subclass of: SO_0000673
so part of: SPIRE2
location: complement(join(1365850..1366045,1366148..1366263,1366434..1366461,1366588..1366655,1366731..1366865,1366989..1367122,1367364..1367526,1367630..1367799,1367911..1368034,1368156..1368242,1368340..1368504,1368583..1368663,1368842..1369201,1369404..1369441,1371981..1372776))
location: region:1365850-1372776:-1
so has part: feature:1371981-1372776:-1:exon
so has part: feature:1369404-1369441:-1:exon
so has part: feature:1368842-1369201:-1:exon
so has part: feature:1368583-1368663:-1:exon
so has part: feature:1368340-1368504:-1:exon
so has part: feature:1368156-1368242:-1:exon
so has part: feature:1367911-1368034:-1:exon
so has part: feature:1367630-1367799:-1:exon
so has part: feature:1367364-1367526:-1:exon
so has part: feature:1366989-1367122:-1:exon
so has part: feature:1366731-1366865:-1:exon
so has part: feature:1366588-1366655:-1:exon
so has part: feature:1366434-1366461:-1:exon
so has part: feature:1366148-1366263:-1:exon
so has part: feature:1365850-1366045:-1:exon

XP_027322200.1
type: Protein
SIO_000068: ncbiprotein

position:1365850:-1
position: 1365850
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1372776:-1
position: 1372776
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1371981-1372776:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1369404-1369441:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1368842-1369201:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1368583-1368663:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1368340-1368504:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1368156-1368242:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1367911-1368034:-1:exon