Pseudoalteromonas xiamenensis strain STKMTI.2 plasmid unnamed2, complete sequence.
type: Entry
definition: Pseudoalteromonas xiamenensis strain STKMTI.2 plasmid unnamed2, complete sequence.
sequence version: NZ_CP072132.1
sequence date: 2023-04-24
sequence: sequence
division: CON
label: NZ_CP072132.1
type: RefSeq
SIO_000068: refseq
dblink: PRJNA224116
dblink: SAMN18395665
keyword: RefSeq
source: Pseudoalteromonas xiamenensis
organism: Pseudoalteromonas xiamenensis
taxonomy: Bacteria; Pseudomonadota; Gammaproteobacteria; Alteromonadales; Pseudoalteromonadaceae; Pseudoalteromonas.
reference: 1
reference: 2
comment: REFSEQ INFORMATION: The reference sequence is identical to\nCP072132.1.\nBacteria and source DNA available from Laboratory of Fish Health\nand Environmental Management, Fisheries Department, University of\nGadjah Mada, Yogyakarta.\nThe annotation was added by the NCBI Prokaryotic Genome Annotation\nPipeline (PGAP). Information about PGAP can be found here:\nhttps://www.ncbi.nlm.nih.gov/genome/annotation_prok/\n\n##Genome-Assembly-Data-START##\nAssembly Date :: 14-DEC-2020\nAssembly Method :: flye v. 2-sept-2020\nAssembly Name :: Flye software version 2.8.1\nGenome Representation :: Full\nExpected Final Version :: Yes\nGenome Coverage :: 109.0x\nSequencing Technology :: Oxford Nanopore GridION\n##Genome-Assembly-Data-END##\n\n##Genome-Annotation-Data-START##\nAnnotation Provider :: NCBI RefSeq\nAnnotation Date :: 04/24/2023 05:05:36\nAnnotation Pipeline :: NCBI Prokaryotic Genome\n Annotation Pipeline (PGAP)\nAnnotation Method :: Best-placed reference protein\n set; GeneMarkS-2+\nAnnotation Software revision :: 6.5\nFeatures Annotated :: Gene; CDS; rRNA; tRNA; ncRNA\nGenes (total) :: 4,421\nCDSs (total) :: 4,288\nGenes (coding) :: 3,853\nCDSs (with protein) :: 3,853\nGenes (RNA) :: 133\nrRNAs :: 9, 8, 8 (5S, 16S, 23S)\ncomplete rRNAs :: 9, 8, 8 (5S, 16S, 23S)\ntRNAs :: 104\nncRNAs :: 4\nPseudo Genes (total) :: 435\nCDSs (without protein) :: 435\nPseudo Genes (ambiguous residues) :: 0 of 435\nPseudo Genes (frameshifted) :: 402 of 435\nPseudo Genes (incomplete) :: 29 of 435\nPseudo Genes (internal stop) :: 17 of 435\nPseudo Genes (multiple problems) :: 11 of 435\nCRISPR Arrays :: 1\n##Genome-Annotation-Data-END##\nCOMPLETENESS: full length.

sequence
subclass of: SO_0000155
sequence length: 23031
topology: linear
so has quality: SO_0000987
location: 1..23031
location: region:1-23031:1
RO_0002162: 882626

NZ_CP072132
type: RefSeq
SIO_000068: refseq

PRJNA224116
type: BioProject
SIO_000068: bioproject

SAMN18395665
type: BioSample
SIO_000068: biosample

1
title: Complete Genome of Pseudoalteromonas xiamenensis STKMTI.2, a new potential marine bacterium producing anti-Vibrio compounds
author: Handayani, D.P.
author: Isnansetyo, A.
author: Istiqomah, I.
author: Jumina, J.
journal: Unpublished

2
title: Direct Submission
author: Handayani, D.P.
author: Isnansetyo, A.
author: Istiqomah, I.
author: Jumina, J.
journal: Submitted (22-MAR-2021) fisheries, universitas gadjah mada, jalan flora, Sleman, Yogyakarta 55281, Indonesia

position:1:1
position: 1
reference: sequence
type: ForwardStrandPosition
type: ExactPosition
type: FuzzyPosition

position:23031:1
position: 23031
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

feature:1-23031:1:source
so part of: sequence
organism: Pseudoalteromonas xiamenensis
mol type: genomic DNA
strain: STKMTI.2
isolation source: mangrove sediment
plasmid: unnamed2
country: Indonesia: Pulau Setokok
lat lon: 0.941799 N 104.056429 E
collection date: 2019-04-15

882626
type: Taxonomy
SIO_000068: taxonomy

J5O05_RS21545
type: Gene
subclass of: SO_0000704
RO_0002162: 882626
locus tag: J5O05_RS21545
pseudo: true
so part of: sequence
location: <1..445
location: region:1-445:1
so has part: feature:1-445:1:exon
subclass of: SO_0000010

position:445:1
position: 445
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1-445:1:exon

J5O05_RS21545
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 882626
locus tag: J5O05_RS21545
inference: COORDINATES: similar to AA sequence:RefSeq:WP_010382180.1
note: frameshifted; incomplete; missing N-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 2
transl table: 11
product: PD-(D/E)XK nuclease family protein
SIO_010081: J5O05_RS21545
subclass of: SO_0000673
so part of: J5O05_RS21545
location: <1..445
location: region:1-445:1
so has part: feature:1-445:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1-445:1:exon

J5O05_RS22275
type: Gene
subclass of: SO_0000704
RO_0002162: 882626
locus tag: J5O05_RS22275
so part of: sequence
location: 447..1289
location: region:447-1289:1
so has part: feature:447-1289:1:exon
subclass of: SO_0000010

position:447:1
position: 447
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1289:1
position: 1289
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:447-1289:1:exon

J5O05_RS22275
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 882626
locus tag: J5O05_RS22275
inference: COORDINATES: protein motif:HMM:NF024642.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: AAA family ATPase
translation: MSMQVGFDFDARELDVTQITKHLLALGKIRYSDVKLAKMVAFDNDAVYFLVLLLLIAEQQQHTCLELRHLDWMNPFGLRDKEQVIDFPLDVISIKDAVEAIDLLEKHPAVGDNKPLSLFGSKLYLSRHARYEATLSQRFLEMANRQINVDAEQLKWLLAEYFPKQSDEVDWQKVACANAVLNGFSIITGGPGTGKTTTVTKLLAILQSLYQGAPLNIKLVAPTGKAAARLSESIKSAKHKLALPEMLSTLIPEDGQTLHRLLGVIPFQINLDTMNPILCI
SIO_010081: J5O05_RS22275
subclass of: SO_0000673
so part of: J5O05_RS22275
location: 447..1289
location: region:447-1289:1
so has part: feature:447-1289:1:exon

WP_280117623.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:447-1289:1:exon

J5O05_RS00090
type: Gene
subclass of: SO_0000704
RO_0002162: 882626
gene: recD
locus tag: J5O05_RS00090
old locus tag: J5O05_00090
so part of: sequence
location: 1292..2335
location: region:1292-2335:1
so has part: feature:1292-2335:1:exon
subclass of: SO_0000010

position:1292:1
position: 1292
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2335:1
position: 2335
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1292-2335:1:exon

J5O05_RS00090
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 882626
gene: recD
locus tag: J5O05_RS00090
old locus tag: J5O05_00090
EC number: 3.1.11.5
inference: COORDINATES: protein motif:HMM:TIGR01447.1
GO component: GO:0009338 - exodeoxyribonuclease V complex [Evidence IEA]
GO function: GO:0008854 - exodeoxyribonuclease V activity [Evidence IEA]
GO process: GO:0006310 - DNA recombination [Evidence IEA]; GO:0006281 - DNA repair [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: exodeoxyribonuclease V subunit alpha
translation: MLIVDEASMVDLSLMAKLVKALPKGARLILLGDKDQLASVDTGCVLGDLCQKLTLGVTPSYTPEHRLQLENLCEAVFSAAVSEQDDFKLRDSLSFLQKSHRFNEQSGIGQLALAVNNNDSRHLDWVLAQGFADIQLENLSQQSYTNLILGSAQRYAQYLTAIARNEKPSMVHELFNQYRLLCAVREGAYGANELNFKIEQALVQQGLILRTGRFYLGMPIMITHNDYQLKLFNGDIGILMLDDDGELKASFIDDAGETRFFYPARLPQFELAYVMTIHKSQGSEFPHTAILLPPMQKAQQGINRQLVYTGITRAKLKLELVAQPEVLKLAMRKSVQRSSGLYERLIS
SIO_010081: J5O05_RS00090
subclass of: SO_0000673
so part of: J5O05_RS00090
location: 1292..2335
location: region:1292-2335:1
so has part: feature:1292-2335:1:exon

WP_280117624.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1292-2335:1:exon

J5O05_RS00095
type: Gene
subclass of: SO_0000704
RO_0002162: 882626
locus tag: J5O05_RS00095
old locus tag: J5O05_00095
so part of: sequence
location: complement(2399..3637)
location: region:2399-3637:-1
so has part: feature:2399-3637:-1:exon
subclass of: SO_0000010

position:2399:-1
position: 2399
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3637:-1
position: 3637
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2399-3637:-1:exon

J5O05_RS00095
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 882626
locus tag: J5O05_RS00095
old locus tag: J5O05_00095
inference: COORDINATES: similar to AA sequence:RefSeq:WP_014609706.1
GO function: GO:0004180 - carboxypeptidase activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: amidohydrolase
translation: MSASAKQNSTITVSADLQQQVIDWRRHFHEFPELSNREFKTSQTISDNLKALGLDVQTNIAHTGVVAMLKGATPGPTIAFRADMDALPVKEQVDLPFASKQTATYRGQTVGVMHACGHDNHVAILLGVAHQLNEMKDQLSGNVMFIFQPAEEGAPEGEEGGAALMLKQGLFKDIKPEAVFGLHVTNRLHSGQIGYRSGPLMASEDSFEMTIHGKQTHGSRPWNGVDPIVTAAQVIMATQTIASRQVDVTKAPSVVSFGAINGGIRSNIIPDEVSLIGTIRSFDQDMRADIKEKLVFTAETVAKSQGATAEVKIKHGYPVTVNNPTLTEKMIPSIKRVAGDDNVMEVPLVTGAEDFSYYALETPGLFFFLGVTPKDMPLDKSASNHSPRFYVDEPALQVGVRALTQIAVDYLK
SIO_010081: J5O05_RS00095
subclass of: SO_0000673
so part of: J5O05_RS00095
location: complement(2399..3637)
location: region:2399-3637:-1
so has part: feature:2399-3637:-1:exon

WP_244369502.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:2399-3637:-1:exon

J5O05_RS00100
type: Gene
subclass of: SO_0000704
RO_0002162: 882626
locus tag: J5O05_RS00100
old locus tag: J5O05_00100
so part of: sequence
location: 3910..4422
location: region:3910-4422:1
so has part: feature:3910-4422:1:exon
subclass of: SO_0000010

position:3910:1
position: 3910
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4422:1
position: 4422
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3910-4422:1:exon

J5O05_RS00100
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 882626
locus tag: J5O05_RS00100
old locus tag: J5O05_00100
inference: COORDINATES: similar to AA sequence:RefSeq:WP_005493717.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DUF962 domain-containing protein
translation: MKTLVEQLSQYARYHRDKRNIATHFIGIPLIVIAVMYLLYFPVLEVGSFTVTATLVVIALSLVYYLMLSLSLGFAMAVAFAAMYAIVCYSAPYLGSFSHYGMLIMGVILFVVGWIFQFVGHYYEGKKPAFVDDLIGLAIGPLFVMAEFLFILGFHKPLEQDIIREAGEYR
SIO_010081: J5O05_RS00100
subclass of: SO_0000673
so part of: J5O05_RS00100
location: 3910..4422
location: region:3910-4422:1
so has part: feature:3910-4422:1:exon

WP_208841703.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:3910-4422:1:exon

J5O05_RS00105
type: Gene
subclass of: SO_0000704
RO_0002162: 882626
locus tag: J5O05_RS00105
old locus tag: J5O05_00105
so part of: sequence
location: complement(4493..5449)
location: region:4493-5449:-1
so has part: feature:4493-5449:-1:exon
subclass of: SO_0000010

position:4493:-1
position: 4493
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5449:-1
position: 5449
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4493-5449:-1:exon

J5O05_RS00105
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 882626
locus tag: J5O05_RS00105
old locus tag: J5O05_00105
inference: COORDINATES: similar to AA sequence:RefSeq:WP_005493718.1
GO function: GO:0051219 - phosphoprotein binding [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: FHA domain-containing protein
translation: MAYLIDEQKLEKVYLKSYHTVGRQKLSVDTIIDKPTISRHHAIIELADGKWQIRDVSTNGVWLNDKKLDKNLSYTLAVNDKIDFAVAGENSYVVGDLDTNCRYLISQSIPRQVIEVTDQHVIPNDDEPSFIIYHDKIINYWFIEDLNTNDRQALFDGGIVKALGTQWQYICATEHQSTEIMNNEHNIAPCSLMFNVSQDEENTQLSINVDNKEYDLGTRSHHYLLLLLARHRIEDKENGVELSHQGWQYREHMAKDLGIQMNHMNIMLHRARKQLSDLAEQGAPDLSFLLETYFGKIRLNCQDLSIIKGAHLETRVTF
SIO_010081: J5O05_RS00105
subclass of: SO_0000673
so part of: J5O05_RS00105
location: complement(4493..5449)
location: region:4493-5449:-1
so has part: feature:4493-5449:-1:exon

WP_208841704.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:4493-5449:-1:exon

J5O05_RS00110
type: Gene
subclass of: SO_0000704
RO_0002162: 882626
locus tag: J5O05_RS00110
old locus tag: J5O05_00110
so part of: sequence
location: 5767..6357
location: region:5767-6357:1
so has part: feature:5767-6357:1:exon
subclass of: SO_0000010

position:5767:1
position: 5767
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6357:1
position: 6357
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5767-6357:1:exon

J5O05_RS00110
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 882626
locus tag: J5O05_RS00110
old locus tag: J5O05_00110
inference: COORDINATES: similar to AA sequence:RefSeq:WP_010365065.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: CBS domain-containing protein
translation: MGEYRAIKTIKLDEVFQFCDHYDSEPLSLSSSALKVVTDFTRRQPQVIMKDVDVDHALYMMINGHVRSKLVIDHDDTFLGVITAKDLTGRKVLATAQKKSLGRADLTVEDMMTKRFELQAMPYRLVESAKIGDVVETLQDIGQQHVLLVDDKGALRGMISASDIARALHMPVNILEKARSFKSIFEIIHDREELDA
SIO_010081: J5O05_RS00110
subclass of: SO_0000673
so part of: J5O05_RS00110
location: 5767..6357
location: region:5767-6357:1
so has part: feature:5767-6357:1:exon

WP_208841705.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:5767-6357:1:exon

J5O05_RS00115
type: Gene
subclass of: SO_0000704
RO_0002162: 882626
locus tag: J5O05_RS00115
old locus tag: J5O05_00115
so part of: sequence
location: complement(6424..7347)
location: region:6424-7347:-1
so has part: feature:6424-7347:-1:exon
subclass of: SO_0000010

position:6424:-1
position: 6424
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7347:-1
position: 7347
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6424-7347:-1:exon

J5O05_RS00115
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 882626
locus tag: J5O05_RS00115
old locus tag: J5O05_00115
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011328563.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: M14 family metallocarboxypeptidase
translation: MNNIYPIGTPGEPWQQHHKEMWFSSQVSHRSYFNEVVSKIDELTENFDKVQYGTLDYAQRFPLFILKSKVWDNTKPNVLITGGVHGYETSGVHGALDFLARFGKEYEAKFNLIVAPCISPWGYETINRWNPNAIDPNRSFYSNSPAPEAASFIKYLADSELSFLMHIDLHETTDTDNSEFRPALAARDGKVNHNWNIPDGFYLVGHTQKPQPEFQKAIIEEVQKVTTIAPADSNNELIGVALEQFGVINYDGTKLGLCMGVTNAPYVTTTEVYPDGELSTPENCIAGQVAAIVGALNYVGQLNREVQ
SIO_010081: J5O05_RS00115
subclass of: SO_0000673
so part of: J5O05_RS00115
location: complement(6424..7347)
location: region:6424-7347:-1
so has part: feature:6424-7347:-1:exon

WP_208841706.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:6424-7347:-1:exon

J5O05_RS00120
type: Gene
subclass of: SO_0000704
RO_0002162: 882626
locus tag: J5O05_RS00120
old locus tag: J5O05_00120
so part of: sequence
location: complement(7428..7838)
location: region:7428-7838:-1
so has part: feature:7428-7838:-1:exon
subclass of: SO_0000010

position:7428:-1
position: 7428
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7838:-1
position: 7838
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7428-7838:-1:exon

J5O05_RS00120
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 882626
locus tag: J5O05_RS00120
old locus tag: J5O05_00120
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MRELQLNINKSFYVLLCVFAAAIWGFGALLNDFGKSSFNHVELFLALVIVLFCAFHLALSLTGQRKAVFCSQGLYYINALGKRRYVLAEQITGVKVLSVFGLKVTKISLVDSTLLFVAFNPCEKQLAQLRVQGYAI
SIO_010081: J5O05_RS00120
subclass of: SO_0000673
so part of: J5O05_RS00120
location: complement(7428..7838)
location: region:7428-7838:-1
so has part: feature:7428-7838:-1:exon

WP_208841707.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:7428-7838:-1:exon

J5O05_RS00125
type: Gene
subclass of: SO_0000704
RO_0002162: 882626
locus tag: J5O05_RS00125
old locus tag: J5O05_00125
so part of: sequence
location: complement(8060..8923)
location: region:8060-8923:-1
so has part: feature:8060-8923:-1:exon
subclass of: SO_0000010

position:8060:-1
position: 8060
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:8923:-1
position: 8923
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:8060-8923:-1:exon

J5O05_RS00125
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 882626
locus tag: J5O05_RS00125
old locus tag: J5O05_00125
inference: COORDINATES: similar to AA sequence:RefSeq:WP_005493723.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MQKTCLTFLTLMSLCTSASDGLEVPITIEKDIYEYTQTLLGSDSPLTIEHFQHEVCQRDVVDFILVQRAIALGGLNLQFEFELGNYDARNLRLLKDGLLLISFDTIWYSDAAKYEDEVYISDPIIRKGEYFAGIFTSPSRIAEVSKKITSDLSGVSIVSSQAWYVDWKTINALKPKTLVDESDWIVMAKMVSRGWVDVMLVPFTNHPPYEYQGTGYKIEAIPKLKIALLDSRHFVVSKKHPLGANAFQALQTGLSILRKTGFIERAYQECGFLNQSVTNWKTLMPPQ
SIO_010081: J5O05_RS00125
subclass of: SO_0000673
so part of: J5O05_RS00125
location: complement(8060..8923)
location: region:8060-8923:-1
so has part: feature:8060-8923:-1:exon

WP_244369498.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:8060-8923:-1:exon

J5O05_RS00130
type: Gene
subclass of: SO_0000704
RO_0002162: 882626
locus tag: J5O05_RS00130
old locus tag: J5O05_00130
so part of: sequence
location: 9152..9547
location: region:9152-9547:1
so has part: feature:9152-9547:1:exon
subclass of: SO_0000010

position:9152:1
position: 9152
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:9547:1
position: 9547
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:9152-9547:1:exon

J5O05_RS00130
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 882626
locus tag: J5O05_RS00130
old locus tag: J5O05_00130
inference: COORDINATES: similar to AA sequence:RefSeq:WP_017218137.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MKFEQLLTHFDMGISIEQLQKESLLDIAILFMGLDGAIDDKEKLVVKSFARNLDWHSVIPLDDYITDMQGKCILAIQSNEVESFIQHRLKHIVDAPMRDLALKLATEVSKADGTVDDKERRALSLLEAEII
SIO_010081: J5O05_RS00130
subclass of: SO_0000673
so part of: J5O05_RS00130
location: 9152..9547
location: region:9152-9547:1
so has part: feature:9152-9547:1:exon

WP_208841708.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:9152-9547:1:exon

J5O05_RS00135
type: Gene
subclass of: SO_0000704
RO_0002162: 882626
locus tag: J5O05_RS00135
old locus tag: J5O05_00135
so part of: sequence
location: complement(9620..10507)
location: region:9620-10507:-1
so has part: feature:9620-10507:-1:exon
subclass of: SO_0000010

position:9620:-1
position: 9620
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:10507:-1
position: 10507
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:9620-10507:-1:exon

J5O05_RS00135
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 882626
locus tag: J5O05_RS00135
old locus tag: J5O05_00135
inference: COORDINATES: similar to AA sequence:RefSeq:WP_005493725.1
GO function: GO:0003824 - catalytic activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: TIGR01777 family oxidoreductase
translation: MKILITGGTGLIGSMLCAQLNAHSLFVLTRNTDNKLFSGSNHITPISHIEDVDFNDIDAVINLAGEPIAEKRWNEQQKQLIVQSRLGITQSLVSKINNCVNPPSVFISGSAIGYYGRQSPNLLIDESFEEAFIEFSHELCSMWENEALKTNQNTRVCILRTGIVLSKDGGALKKLLPSFKLGIGSVVADGRQLMSWIHIQDMVKGIIFLLENSTSNGIFNMTAPNAVNNHEFSKTLAAQLHRPCLLSMPAWVMKLLFGEMADLLIYGQGVYPKRLLGAGFNFDYPTLDKALNDLL
SIO_010081: J5O05_RS00135
subclass of: SO_0000673
so part of: J5O05_RS00135
location: complement(9620..10507)
location: region:9620-10507:-1
so has part: feature:9620-10507:-1:exon

WP_208841709.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:9620-10507:-1:exon

J5O05_RS00140
type: Gene
subclass of: SO_0000704
RO_0002162: 882626
locus tag: J5O05_RS00140
old locus tag: J5O05_00140
so part of: sequence
location: 10637..11674
location: region:10637-11674:1
so has part: feature:10637-11674:1:exon
subclass of: SO_0000010

position:10637:1
position: 10637
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:11674:1
position: 11674
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:10637-11674:1:exon

J5O05_RS00140
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 882626
locus tag: J5O05_RS00140
old locus tag: J5O05_00140
inference: COORDINATES: similar to AA sequence:RefSeq:WP_017219139.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: AI-2E family transporter
translation: MSQVSPAHRTLVILACLVIVFAGIKLASSIVIPFILAAFIAIICSPMLHFFARFHIPKGISILLIIAIVVGIGVSLAGLVGQSVTDFSKQLPSYKAQLQDKFVWLINIAATYGVPVDKQQLIKLFDPGQVFDVATNTLSSLGGVMANIFLIMLTVIFMLFEAPTLSQKVHLALDDPEMKMKAIDRFLESINSYLAIKTLVSLATGVLVSVFLWILGLDYFLLWGVIAFFLNYIPNIGSIIAAVPAVLLALVTLGPLESGIVAIGYVIINTVMGNIIEPKFMGKGLGLSTLVVFLSLIFWGWLLGTVGMLLSVPLTMVVKIGLENTEKGKWLAVLLGNVDENKDAH
SIO_010081: J5O05_RS00140
subclass of: SO_0000673
so part of: J5O05_RS00140
location: 10637..11674
location: region:10637-11674:1
so has part: feature:10637-11674:1:exon

WP_208841710.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:10637-11674:1:exon

J5O05_RS00145
type: Gene
subclass of: SO_0000704
RO_0002162: 882626
locus tag: J5O05_RS00145
old locus tag: J5O05_00145
so part of: sequence
location: complement(11671..12075)
location: region:11671-12075:-1
so has part: feature:11671-12075:-1:exon
subclass of: SO_0000010

position:11671:-1
position: 11671
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:12075:-1
position: 12075
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:11671-12075:-1:exon

J5O05_RS00145
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 882626
locus tag: J5O05_RS00145
old locus tag: J5O05_00145
inference: COORDINATES: similar to AA sequence:RefSeq:WP_005493727.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MKRTNLMALSLLLAPSVHALDNLRDCSALESDHPEKAKKYIQCLDQNIELLKSSEQTWFQKLKLDIEKIQEDTGNTQLLPIIKRAASNQVNYMEDTCRWRYLHKMPNPTKAAIAYKTCEINLRKQNLETLKMPY
SIO_010081: J5O05_RS00145
subclass of: SO_0000673
so part of: J5O05_RS00145
location: complement(11671..12075)
location: region:11671-12075:-1
so has part: feature:11671-12075:-1:exon

WP_208841711.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:11671-12075:-1:exon

J5O05_RS00150
type: Gene
subclass of: SO_0000704
RO_0002162: 882626
locus tag: J5O05_RS00150
old locus tag: J5O05_00150
pseudo: true
so part of: sequence
location: complement(12062..13403)
location: region:12062-13403:-1
so has part: feature:12062-13403:-1:exon
subclass of: SO_0000010

position:12062:-1
position: 12062
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:13403:-1
position: 13403
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:12062-13403:-1:exon

J5O05_RS00150
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 882626
locus tag: J5O05_RS00150
old locus tag: J5O05_00150
inference: COORDINATES: similar to AA sequence:RefSeq:WP_010363210.1
note: frameshifted; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: ATP-binding protein
SIO_010081: J5O05_RS00150
subclass of: SO_0000673
so part of: J5O05_RS00150
location: complement(12062..13403)
location: region:12062-13403:-1
so has part: feature:12062-13403:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:12062-13403:-1:exon

J5O05_RS00155
type: Gene
subclass of: SO_0000704
RO_0002162: 882626
locus tag: J5O05_RS00155
old locus tag: J5O05_00155
pseudo: true
so part of: sequence
location: complement(13397..14073)
location: region:13397-14073:-1
so has part: feature:13397-14073:-1:exon
subclass of: SO_0000010

position:13397:-1
position: 13397
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:14073:-1
position: 14073
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:13397-14073:-1:exon

J5O05_RS00155
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 882626
locus tag: J5O05_RS00155
old locus tag: J5O05_00155
inference: COORDINATES: similar to AA sequence:RefSeq:WP_007375447.1
GO function: GO:0003677 - DNA binding [Evidence IEA]
GO process: GO:0000160 - phosphorelay signal transduction system [Evidence IEA]; GO:0006355 - regulation of DNA-templated transcription [Evidence IEA]
note: frameshifted; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: response regulator transcription factor
SIO_010081: J5O05_RS00155
subclass of: SO_0000673
so part of: J5O05_RS00155
location: complement(13397..14073)
location: region:13397-14073:-1
so has part: feature:13397-14073:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:13397-14073:-1:exon

J5O05_RS00160
type: Gene
subclass of: SO_0000704
RO_0002162: 882626
locus tag: J5O05_RS00160
old locus tag: J5O05_00160
so part of: sequence
location: complement(14077..14328)
location: region:14077-14328:-1
so has part: feature:14077-14328:-1:exon
subclass of: SO_0000010

position:14077:-1
position: 14077
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:14328:-1
position: 14328
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:14077-14328:-1:exon

J5O05_RS00160
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 882626
locus tag: J5O05_RS00160
old locus tag: J5O05_00160
inference: COORDINATES: similar to AA sequence:RefSeq:WP_010363213.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: PepSY domain-containing protein
translation: MMRLFTLVAVIGLSIWSLPPAFGKTDSDTLTKKEAVELALKEYSGKTLKITDQGSYYIIRILGSNGRVLDVQVDKKTGAVRKD
SIO_010081: J5O05_RS00160
subclass of: SO_0000673
so part of: J5O05_RS00160
location: complement(14077..14328)
location: region:14077-14328:-1
so has part: feature:14077-14328:-1:exon

WP_244369500.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:14077-14328:-1:exon

J5O05_RS00165
type: Gene
subclass of: SO_0000704
RO_0002162: 882626
locus tag: J5O05_RS00165
old locus tag: J5O05_00165
pseudo: true
so part of: sequence
location: complement(14445..14742)
location: region:14445-14742:-1
so has part: feature:14445-14742:-1:exon
subclass of: SO_0000010

position:14445:-1
position: 14445
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:14742:-1
position: 14742
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:14445-14742:-1:exon

J5O05_RS00165
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 882626
locus tag: J5O05_RS00165
old locus tag: J5O05_00165
inference: COORDINATES: similar to AA sequence:RefSeq:WP_006962737.1
note: frameshifted; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: YciI family protein
SIO_010081: J5O05_RS00165
subclass of: SO_0000673
so part of: J5O05_RS00165
location: complement(14445..14742)
location: region:14445-14742:-1
so has part: feature:14445-14742:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:14445-14742:-1:exon

J5O05_RS00170
type: Gene
subclass of: SO_0000704
RO_0002162: 882626
locus tag: J5O05_RS00170
old locus tag: J5O05_00170
so part of: sequence
location: 14920..16344
location: region:14920-16344:1
so has part: feature:14920-16344:1:exon
subclass of: SO_0000010

position:14920:1
position: 14920
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:16344:1
position: 16344
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:14920-16344:1:exon

J5O05_RS00170
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 882626
locus tag: J5O05_RS00170
old locus tag: J5O05_00170
inference: COORDINATES: similar to AA sequence:RefSeq:WP_013465088.1
GO component: GO:0016020 - membrane [Evidence IEA]; GO:0005886 - plasma membrane [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: sodium-dependent transporter
translation: MSSNREHFSSRLGFILAAAGSAVGIGNLVGFPVSATKNGGGAFLLIYALFVAFICLPVMMAEMAMGRKAQKDPYGAYKKLSDRSTKWSIAGMLGVITPFMIAVFYMVITVWIFGYLAQTTLGNLDLLAQPEHFDTFINNTNVFWYMIVVAVIVNLILVGGVKEGIEKASKVLMPALFVLLIGLVAYVLTLDNAMAGVKFYIVPDISKLNAGVLNGALSQAFFSLSLGMGILMTYASYISKKDDIVGGARMVAITDSLVAFIAGLMVLPAIFSFNPNTNPEELSDSSVSMIFVYLPKLLLALQSDIGYVGASLVAGVFFLLVFFAAITSLVSIVEVPTATLIEEARLSRKKALMVLAASIGILTVMCTMSFGMVEWLTKFTWYGGANKSMFDLVYDIFYDTILPLNGLIVCIFVMYKWKKAKLSEELAQGCEGYEGSWMEKYVNFSLSTFIPVILLAIFINTVATKFFGTSLFGF
SIO_010081: J5O05_RS00170
subclass of: SO_0000673
so part of: J5O05_RS00170
location: 14920..16344
location: region:14920-16344:1
so has part: feature:14920-16344:1:exon

WP_208841712.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:14920-16344:1:exon

J5O05_RS00175
type: Gene
subclass of: SO_0000704
RO_0002162: 882626
locus tag: J5O05_RS00175
old locus tag: J5O05_00175
so part of: sequence
location: complement(16375..17016)
location: region:16375-17016:-1
so has part: feature:16375-17016:-1:exon
subclass of: SO_0000010

position:16375:-1
position: 16375
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:17016:-1
position: 17016
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:16375-17016:-1:exon

J5O05_RS00175
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 882626
locus tag: J5O05_RS00175
old locus tag: J5O05_00175
EC number: 3.4.-.-
inference: COORDINATES: similar to AA sequence:RefSeq:WP_005493734.1
GO component: GO:0016020 - membrane [Evidence IEA]
GO function: GO:0004222 - metalloendopeptidase activity [Evidence IEA]
GO process: GO:0071586 - CAAX-box protein processing [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: CPBP family intramembrane metalloprotease
translation: MNSSQYRWCELIFVFFGLPLMAYQFRAQLANWLLPALIILMAICAFLLLTDPHFKRFRLTTLGTFSAVKQRLFTFFLIGALFSGMLYGLINQDNWFALPRQSPLDWLRLLIVYPLLSVLPQELIFRSYFFHRYKRIIPKKSHRVILSALTFALAHCVYDNLMAILLSFCGGLLFAYTYAQSRSLLVCVLEHSLWGLWIFTLGLGGYLDSGANW
SIO_010081: J5O05_RS00175
subclass of: SO_0000673
so part of: J5O05_RS00175
location: complement(16375..17016)
location: region:16375-17016:-1
so has part: feature:16375-17016:-1:exon

WP_208841713.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:16375-17016:-1:exon

J5O05_RS00180
type: Gene
subclass of: SO_0000704
RO_0002162: 882626
locus tag: J5O05_RS00180
old locus tag: J5O05_00180
so part of: sequence
location: complement(17151..17717)
location: region:17151-17717:-1
so has part: feature:17151-17717:-1:exon
subclass of: SO_0000010

position:17151:-1
position: 17151
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:17717:-1
position: 17717
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:17151-17717:-1:exon

J5O05_RS00180
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 882626
locus tag: J5O05_RS00180
old locus tag: J5O05_00180
inference: COORDINATES: similar to AA sequence:RefSeq:WP_005493736.1
GO component: GO:0016020 - membrane [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: inner membrane-spanning protein YciB
translation: MALLFEYLPLILFFVVYKAVDIFWATGVLIIAAIVQLVYYKVSTGKIETRHWIFAGIAVVLGGMTLAFHDEQFIQWKVSIIYALLGLSILFGKLLFKTNLVEKALMGLFSSVQKEQEVEINIPNAIFNQLLVLWVFLFLSIAVLNLYVAFNYSLDTWVNFKVFGLMGITFIAIVFTMFKVYKFLPEEQ
SIO_010081: J5O05_RS00180
subclass of: SO_0000673
so part of: J5O05_RS00180
location: complement(17151..17717)
location: region:17151-17717:-1
so has part: feature:17151-17717:-1:exon

WP_208841714.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:17151-17717:-1:exon

J5O05_RS00185
type: Gene
subclass of: SO_0000704
RO_0002162: 882626
locus tag: J5O05_RS00185
old locus tag: J5O05_00185
so part of: sequence
location: 17852..18127
location: region:17852-18127:1
so has part: feature:17852-18127:1:exon
subclass of: SO_0000010

position:17852:1
position: 17852
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:18127:1
position: 18127
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:17852-18127:1:exon

J5O05_RS00185
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 882626
locus tag: J5O05_RS00185
old locus tag: J5O05_00185
inference: COORDINATES: similar to AA sequence:RefSeq:WP_010385489.1
GO function: GO:0003677 - DNA binding [Evidence IEA]
GO process: GO:0030261 - chromosome condensation [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: HU family DNA-binding protein
translation: MNKKSLVELMSAQAELPKTHVNAALNSLLAIITKRLSEGDQVQLHNLGTFTLSYHPAKEGRNPQTGEKILIEGANKVLFKPAKALKEALSN
SIO_010081: J5O05_RS00185
subclass of: SO_0000673
so part of: J5O05_RS00185
location: 17852..18127
location: region:17852-18127:1
so has part: feature:17852-18127:1:exon

WP_208841715.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:17852-18127:1:exon

J5O05_RS00190
type: Gene
subclass of: SO_0000704
RO_0002162: 882626
gene: trpA
locus tag: J5O05_RS00190
old locus tag: J5O05_00190
so part of: sequence
location: complement(18153..18959)
location: region:18153-18959:-1
so has part: feature:18153-18959:-1:exon
subclass of: SO_0000010

position:18153:-1
position: 18153
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:18959:-1
position: 18959
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:18153-18959:-1:exon

J5O05_RS00190
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 882626
gene: trpA
locus tag: J5O05_RS00190
old locus tag: J5O05_00190
EC number: 4.2.1.20
inference: COORDINATES: similar to AA sequence:RefSeq:WP_010560344.1
GO function: GO:0004834 - tryptophan synthase activity [Evidence IEA]
GO process: GO:0000162 - tryptophan biosynthetic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: tryptophan synthase subunit alpha
translation: MRRYDELFEQLNKKNEGAFVPFVTLGDPSKEQSIEIIKALIDGGADALELGIPFSDPIADGPVIQSANIRALNAHINTQDSFDIIKAIREYNANIPIGLLLYSNLVFAKGIDSFYEQARAVGVDSVLVADVPLHESKRFRQAAMANEIAPIFIATPNADDDTLRQCASYGRGYTYLLSRAGVTGTDTVAEMPAGDIVDKLLSYRAAPALLGFGISTPEHVKAALEAGAAGAISGSAVVKIIEQNLSDFPNMLTTLTQFVRSMKAATHR
SIO_010081: J5O05_RS00190
subclass of: SO_0000673
so part of: J5O05_RS00190
location: complement(18153..18959)
location: region:18153-18959:-1
so has part: feature:18153-18959:-1:exon

WP_208841716.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:18153-18959:-1:exon

J5O05_RS00195
type: Gene
subclass of: SO_0000704
RO_0002162: 882626
gene: trpB
locus tag: J5O05_RS00195
old locus tag: J5O05_00195
so part of: sequence
location: complement(18956..20140)
location: region:18956-20140:-1
so has part: feature:18956-20140:-1:exon
subclass of: SO_0000010

position:18956:-1
position: 18956
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:20140:-1
position: 20140
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:18956-20140:-1:exon

J5O05_RS00195
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 882626
gene: trpB
locus tag: J5O05_RS00195
old locus tag: J5O05_00195
EC number: 4.2.1.20
inference: COORDINATES: similar to AA sequence:RefSeq:WP_010554212.1
GO function: GO:0004834 - tryptophan synthase activity [Evidence IEA]
GO process: GO:0000162 - tryptophan biosynthetic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: tryptophan synthase subunit beta
translation: MSNKGYFGDFGGMFVPELLVPALKQLDAEFEKAQNDPAFLTEFNQLLTEYAGRPTPLTLTRNLVKNPKVKLYLKREDLLHGGAHKTNQVLGQALLTKRMGKNEVIAETGAGQHGVATALACALLGLKCRIYMGAKDVERQQPNVFRMRLMGAEVIPVTAGSGTLKDAVNEALRDWSANYKTAHYLLGTAAGPHPFPTIVREFQKMIGIEAKEQVLNAEGRLPDAVIACVGGGSNAIGMFADFIGDSSVKLIGVEPAGKGLDTEEHGAAICKGSKGILHGAYTFIMQNQDGQIEESYSVSAGLDYPAVGPQHAYLAETGRAQYVGITDDEALDAFQALAKNEGIIPALESSHALAYALKYAEAQTEETILVVNLSGRGDKDLTHVHQVLAKRGSL
SIO_010081: J5O05_RS00195
subclass of: SO_0000673
so part of: J5O05_RS00195
location: complement(18956..20140)
location: region:18956-20140:-1
so has part: feature:18956-20140:-1:exon

WP_208841717.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:18956-20140:-1:exon

J5O05_RS00200
type: Gene
subclass of: SO_0000704
RO_0002162: 882626
gene: trpCF
locus tag: J5O05_RS00200
old locus tag: J5O05_00200
pseudo: true
so part of: sequence
location: complement(20148..21514)
location: region:20148-21514:-1
so has part: feature:20148-21514:-1:exon
subclass of: SO_0000010

position:20148:-1
position: 20148
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:21514:-1
position: 21514
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:20148-21514:-1:exon

J5O05_RS00200
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 882626
gene: trpCF
locus tag: J5O05_RS00200
old locus tag: J5O05_00200
inference: COORDINATES: similar to AA sequence:RefSeq:WP_010557516.1
GO function: GO:0004425 - indole-3-glycerol-phosphate synthase activity [Evidence IEA]; GO:0004640 - phosphoribosylanthranilate isomerase activity [Evidence IEA]
GO process: GO:0006568 - tryptophan metabolic process [Evidence IEA]
note: frameshifted; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: bifunctional indole-3-glycerol-phosphate synthase TrpC/phosphoribosylanthranilate isomerase TrpF
SIO_010081: J5O05_RS00200
subclass of: SO_0000673
so part of: J5O05_RS00200
location: complement(20148..21514)
location: region:20148-21514:-1
so has part: feature:20148-21514:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:20148-21514:-1:exon

J5O05_RS00205
type: Gene
subclass of: SO_0000704
RO_0002162: 882626
gene: trpD
locus tag: J5O05_RS00205
old locus tag: J5O05_00205
pseudo: true
so part of: sequence
location: complement(21507..22516)
location: region:21507-22516:-1
so has part: feature:21507-22516:-1:exon
subclass of: SO_0000010

position:21507:-1
position: 21507
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:22516:-1
position: 22516
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:21507-22516:-1:exon

J5O05_RS00205
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 882626
gene: trpD
locus tag: J5O05_RS00205
old locus tag: J5O05_00205
inference: COORDINATES: similar to AA sequence:RefSeq:WP_010378567.1
GO function: GO:0004048 - anthranilate phosphoribosyltransferase activity [Evidence IEA]
GO process: GO:0000162 - tryptophan biosynthetic process [Evidence IEA]
note: frameshifted; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: anthranilate phosphoribosyltransferase
SIO_010081: J5O05_RS00205
subclass of: SO_0000673
so part of: J5O05_RS00205
location: complement(21507..22516)
location: region:21507-22516:-1
so has part: feature:21507-22516:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:21507-22516:-1:exon

J5O05_RS00210
type: Gene
subclass of: SO_0000704
RO_0002162: 882626
locus tag: J5O05_RS00210
old locus tag: J5O05_00210
pseudo: true
so part of: sequence
location: complement(22517..>23031)
location: region:22517-23031:-1
so has part: feature:22517-23031:-1:exon
subclass of: SO_0000010

position:22517:-1
position: 22517
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:23031:-1
position: 23031
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition

urn:…
SIO_000300: 1
SIO_000628: feature:22517-23031:-1:exon

J5O05_RS00210
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 882626
locus tag: J5O05_RS00210
old locus tag: J5O05_00210
inference: COORDINATES: similar to AA sequence:RefSeq:WP_005493745.1
GO function: GO:0016787 - hydrolase activity [Evidence IEA]
note: Members of this family of hydrolases with an active site Cys residue belong to MEROPS family C26.; frameshifted; incomplete; missing N-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 2
transl table: 11
product: gamma-glutamyl-gamma-aminobutyrate hydrolase family protein
SIO_010081: J5O05_RS00210
subclass of: SO_0000673
so part of: J5O05_RS00210
location: complement(22517..>23031)
location: region:22517-23031:-1
so has part: feature:22517-23031:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:22517-23031:-1:exon