Pseudoalteromonas xiamenensis strain STKMTI.2 plasmid unnamed1, complete sequence.
type: Entry
definition: Pseudoalteromonas xiamenensis strain STKMTI.2 plasmid unnamed1, complete sequence.
sequence version: NZ_CP072131.1
sequence date: 2023-04-24
sequence: sequence
division: CON
label: NZ_CP072131.1
type: RefSeq
SIO_000068: refseq
dblink: PRJNA224116
dblink: SAMN18395665
keyword: RefSeq
source: Pseudoalteromonas xiamenensis
organism: Pseudoalteromonas xiamenensis
taxonomy: Bacteria; Pseudomonadota; Gammaproteobacteria; Alteromonadales; Pseudoalteromonadaceae; Pseudoalteromonas.
reference: 1
reference: 2
comment: REFSEQ INFORMATION: The reference sequence is identical to\nCP072131.1.\nBacteria and source DNA available from Laboratory of Fish Health\nand Environmental Management, Fisheries Department, University of\nGadjah Mada, Yogyakarta.\nThe annotation was added by the NCBI Prokaryotic Genome Annotation\nPipeline (PGAP). Information about PGAP can be found here:\nhttps://www.ncbi.nlm.nih.gov/genome/annotation_prok/\n\n##Genome-Assembly-Data-START##\nAssembly Date :: 14-DEC-2020\nAssembly Method :: flye v. 2-sept-2020\nAssembly Name :: Flye software version 2.8.1\nGenome Representation :: Full\nExpected Final Version :: Yes\nGenome Coverage :: 109.0x\nSequencing Technology :: Oxford Nanopore GridION\n##Genome-Assembly-Data-END##\n\n##Genome-Annotation-Data-START##\nAnnotation Provider :: NCBI RefSeq\nAnnotation Date :: 04/24/2023 05:05:36\nAnnotation Pipeline :: NCBI Prokaryotic Genome\n Annotation Pipeline (PGAP)\nAnnotation Method :: Best-placed reference protein\n set; GeneMarkS-2+\nAnnotation Software revision :: 6.5\nFeatures Annotated :: Gene; CDS; rRNA; tRNA; ncRNA\nGenes (total) :: 4,421\nCDSs (total) :: 4,288\nGenes (coding) :: 3,853\nCDSs (with protein) :: 3,853\nGenes (RNA) :: 133\nrRNAs :: 9, 8, 8 (5S, 16S, 23S)\ncomplete rRNAs :: 9, 8, 8 (5S, 16S, 23S)\ntRNAs :: 104\nncRNAs :: 4\nPseudo Genes (total) :: 435\nCDSs (without protein) :: 435\nPseudo Genes (ambiguous residues) :: 0 of 435\nPseudo Genes (frameshifted) :: 402 of 435\nPseudo Genes (incomplete) :: 29 of 435\nPseudo Genes (internal stop) :: 17 of 435\nPseudo Genes (multiple problems) :: 11 of 435\nCRISPR Arrays :: 1\n##Genome-Annotation-Data-END##\nCOMPLETENESS: full length.

sequence
subclass of: SO_0000155
sequence length: 10202
topology: linear
so has quality: SO_0000987
location: 1..10202
location: region:1-10202:1
RO_0002162: 882626

NZ_CP072131
type: RefSeq
SIO_000068: refseq

PRJNA224116
type: BioProject
SIO_000068: bioproject

SAMN18395665
type: BioSample
SIO_000068: biosample

1
title: Complete Genome of Pseudoalteromonas xiamenensis STKMTI.2, a new potential marine bacterium producing anti-Vibrio compounds
author: Handayani, D.P.
author: Isnansetyo, A.
author: Istiqomah, I.
author: Jumina, J.
journal: Unpublished

2
title: Direct Submission
author: Handayani, D.P.
author: Isnansetyo, A.
author: Istiqomah, I.
author: Jumina, J.
journal: Submitted (22-MAR-2021) fisheries, universitas gadjah mada, jalan flora, Sleman, Yogyakarta 55281, Indonesia

position:1:1
position: 1
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:10202:1
position: 10202
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

feature:1-10202:1:source
so part of: sequence
organism: Pseudoalteromonas xiamenensis
mol type: genomic DNA
strain: STKMTI.2
isolation source: mangrove sediment
plasmid: unnamed1
country: Indonesia: Pulau Setokok
lat lon: 0.941799 N 104.056429 E
collection date: 2019-04-15

882626
type: Taxonomy
SIO_000068: taxonomy

J5O05_RS00005
type: Gene
subclass of: SO_0000704
RO_0002162: 882626
locus tag: J5O05_RS00005
old locus tag: J5O05_00005
so part of: sequence
location: 153..509
location: region:153-509:1
so has part: feature:153-509:1:exon
subclass of: SO_0000010

position:153:1
position: 153
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:509:1
position: 509
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:153-509:1:exon

J5O05_RS00005
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 882626
locus tag: J5O05_RS00005
old locus tag: J5O05_00005
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MKARFGTVLLVIVAIVAFGTALSHLSCLYFGPQCYAAQMAPPVLVESAKAGTLLAPFATLVASAIFVVCGSYALSGAKIVRRLPLLNVGIYVIALVSILRGVLTLQLWARHPELVSLC
SIO_010081: J5O05_RS00005
subclass of: SO_0000673
so part of: J5O05_RS00005
location: 153..509
location: region:153-509:1
so has part: feature:153-509:1:exon

WP_208841687.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:153-509:1:exon

J5O05_RS00010
type: Gene
subclass of: SO_0000704
RO_0002162: 882626
locus tag: J5O05_RS00010
old locus tag: J5O05_00010
pseudo: true
so part of: sequence
location: 869..1223
location: region:869-1223:1
so has part: feature:869-1223:1:exon
subclass of: SO_0000010

position:869:1
position: 869
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1223:1
position: 1223
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:869-1223:1:exon

J5O05_RS00010
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 882626
locus tag: J5O05_RS00010
old locus tag: J5O05_00010
inference: COORDINATES: similar to AA sequence:RefSeq:WP_015913358.1
note: frameshifted; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: DUF3147 family protein
SIO_010081: J5O05_RS00010
subclass of: SO_0000673
so part of: J5O05_RS00010
location: 869..1223
location: region:869-1223:1
so has part: feature:869-1223:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:869-1223:1:exon

J5O05_RS00015
type: Gene
subclass of: SO_0000704
RO_0002162: 882626
locus tag: J5O05_RS00015
old locus tag: J5O05_00015
so part of: sequence
location: complement(1422..1730)
location: region:1422-1730:-1
so has part: feature:1422-1730:-1:exon
subclass of: SO_0000010

position:1422:-1
position: 1422
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1730:-1
position: 1730
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1422-1730:-1:exon

J5O05_RS00015
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 882626
locus tag: J5O05_RS00015
old locus tag: J5O05_00015
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MENLAQKAKLEGSIATQLMADCEVANASLANIDNGFEHAIYLYPASIEAPANIYYENDEPSATGPIATALVSLNEDGTGHYEIAFLAQRKLQSRIYLPWSYR
SIO_010081: J5O05_RS00015
subclass of: SO_0000673
so part of: J5O05_RS00015
location: complement(1422..1730)
location: region:1422-1730:-1
so has part: feature:1422-1730:-1:exon

WP_208841688.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1422-1730:-1:exon

J5O05_RS00020
type: Gene
subclass of: SO_0000704
RO_0002162: 882626
locus tag: J5O05_RS00020
old locus tag: J5O05_00020
so part of: sequence
location: complement(1820..2326)
location: region:1820-2326:-1
so has part: feature:1820-2326:-1:exon
subclass of: SO_0000010

position:1820:-1
position: 1820
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2326:-1
position: 2326
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1820-2326:-1:exon

J5O05_RS00020
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 882626
locus tag: J5O05_RS00020
old locus tag: J5O05_00020
inference: COORDINATES: protein motif:HMM:NF025679.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DUF4382 domain-containing protein
translation: MYKYVTLATFMGLLSGCGGGSSSSSTSTQPTTPPVAESTTLTLGVSDAPVTNIAAVWVAFDKITLRASGGQDTVVDISSEDGSKSVRLVNLLQYTGDDIHQLFANQQLEAGNYTWIRADVVNGDSSDYENTSHVIYKDGTYAPLIVNRKRQRWYRRDSTRRIRFSYRN
SIO_010081: J5O05_RS00020
subclass of: SO_0000673
so part of: J5O05_RS00020
location: complement(1820..2326)
location: region:1820-2326:-1
so has part: feature:1820-2326:-1:exon

WP_208841689.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1820-2326:-1:exon

J5O05_RS00025
type: Gene
subclass of: SO_0000704
RO_0002162: 882626
locus tag: J5O05_RS00025
old locus tag: J5O05_00025
so part of: sequence
location: 2722..3174
location: region:2722-3174:1
so has part: feature:2722-3174:1:exon
subclass of: SO_0000010

position:2722:1
position: 2722
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3174:1
position: 3174
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2722-3174:1:exon

J5O05_RS00025
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 882626
locus tag: J5O05_RS00025
old locus tag: J5O05_00025
inference: COORDINATES: similar to AA sequence:RefSeq:WP_005376498.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DUF2384 domain-containing protein
translation: MATSSLKSFKPKPTYKPNYWYSLGIEDDDTSKTASIHLGFKPAVYRNIVEKAKLSQNEFHHVTLIPISTIKRRLKNEERFSTQESDVMYRLALLIKLATDMFDDEQRALEWIREGVYGLNGKRPLDMISTTVDFETVKDLIGRIEHGVFS
SIO_010081: J5O05_RS00025
subclass of: SO_0000673
so part of: J5O05_RS00025
location: 2722..3174
location: region:2722-3174:1
so has part: feature:2722-3174:1:exon

WP_208841690.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:2722-3174:1:exon

J5O05_RS00030
type: Gene
subclass of: SO_0000704
RO_0002162: 882626
locus tag: J5O05_RS00030
old locus tag: J5O05_00030
so part of: sequence
location: 3174..3647
location: region:3174-3647:1
so has part: feature:3174-3647:1:exon
subclass of: SO_0000010

position:3647:1
position: 3647
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3174-3647:1:exon

J5O05_RS00030
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 882626
locus tag: J5O05_RS00030
old locus tag: J5O05_00030
inference: COORDINATES: similar to AA sequence:RefSeq:WP_005426935.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: RES family NAD+ phosphorylase
translation: MKMYRLTQKKFADTPFSPQGAKLFGGRWNSKGTEALYFAESESLCVLEVFVHVNNDPQLIDKYDLYRIEVPEYLIVQLDKEDLPNNWRAIPVGELTQEIGDQFLKLPHPEFVALQVPSTISPRDKNFLVNPNHPLMPEILEKAEKLEFSFDRRIFKQ
SIO_010081: J5O05_RS00030
subclass of: SO_0000673
so part of: J5O05_RS00030
location: 3174..3647
location: region:3174-3647:1
so has part: feature:3174-3647:1:exon

WP_208841691.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:3174-3647:1:exon

J5O05_RS00035
type: Gene
subclass of: SO_0000704
RO_0002162: 882626
locus tag: J5O05_RS00035
old locus tag: J5O05_00035
so part of: sequence
location: complement(3664..4731)
location: region:3664-4731:-1
so has part: feature:3664-4731:-1:exon
subclass of: SO_0000010

position:3664:-1
position: 3664
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4731:-1
position: 4731
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3664-4731:-1:exon

J5O05_RS00035
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 882626
locus tag: J5O05_RS00035
old locus tag: J5O05_00035
EC number: 1.-.-.-
inference: COORDINATES: similar to AA sequence:RefSeq:WP_005492163.1
GO function: GO:0071949 - FAD binding [Evidence IEA]; GO:0016491 - oxidoreductase activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: glycerol-3-phosphate dehydrogenase/oxidase
translation: MEKVAIIGGGINGLCTAWKLAEAGFKVTLFERGELMQQTSAASSKLLHGGIRYLENFEFRLVREALEERKWWLENVPNLTRRLPILYPIYPHTRARWKMKIGMTLYDFLAGKKGIGRHRWLTPRQVKRCSPYLNQQNLKGAYLFHDGQMDDQALGLWVAERCRELGVSIHTQHPVNRITAHGTLSTFQGSFEFDTIINVAGPWSEQLLEDSHLPHDEHLDLVRGSHLLLPPISKFGHLLEVPGESRVVFVLPYKSQTLLGTTEVKHTLNETVEVSKGEQAYLLNLYNHYFTQPCNETDIRSKYAGVRPLLSGKDSLSKHSREYKITRNERLITVFGGKWTTARALGLAVLNQLRK
SIO_010081: J5O05_RS00035
subclass of: SO_0000673
so part of: J5O05_RS00035
location: complement(3664..4731)
location: region:3664-4731:-1
so has part: feature:3664-4731:-1:exon

WP_208841692.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:3664-4731:-1:exon

J5O05_RS21540
type: Gene
subclass of: SO_0000704
RO_0002162: 882626
locus tag: J5O05_RS21540
so part of: sequence
location: 4820..5026
location: region:4820-5026:1
so has part: feature:4820-5026:1:exon
subclass of: SO_0000010

position:4820:1
position: 4820
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5026:1
position: 5026
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4820-5026:1:exon

J5O05_RS21540
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 882626
locus tag: J5O05_RS21540
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MFVDVTRSRHVQSLWQNASVLGSDKPTHVAVCRWQEVLASQFADIDFLRDHSGGNLRKHQVHANLAAL
SIO_010081: J5O05_RS21540
subclass of: SO_0000673
so part of: J5O05_RS21540
location: 4820..5026
location: region:4820-5026:1
so has part: feature:4820-5026:1:exon

WP_244369496.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:4820-5026:1:exon

J5O05_RS00045
type: Gene
subclass of: SO_0000704
RO_0002162: 882626
locus tag: J5O05_RS00045
old locus tag: J5O05_00045
so part of: sequence
location: complement(5029..5217)
location: region:5029-5217:-1
so has part: feature:5029-5217:-1:exon
subclass of: SO_0000010

position:5029:-1
position: 5029
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5217:-1
position: 5217
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5029-5217:-1:exon

J5O05_RS00045
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 882626
locus tag: J5O05_RS00045
old locus tag: J5O05_00045
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: gamma-glutamylcyclotransferase
translation: MPAHLFVYGTLLKKLNLPCYRYIQKVADFVGEAKTHGVLWDLGNYPGLQVDATAGAVMGEAL
SIO_010081: J5O05_RS00045
subclass of: SO_0000673
so part of: J5O05_RS00045
location: complement(5029..5217)
location: region:5029-5217:-1
so has part: feature:5029-5217:-1:exon

WP_208841694.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:5029-5217:-1:exon

J5O05_RS00050
type: Gene
subclass of: SO_0000704
RO_0002162: 882626
locus tag: J5O05_RS00050
old locus tag: J5O05_00050
so part of: sequence
location: complement(5255..5827)
location: region:5255-5827:-1
so has part: feature:5255-5827:-1:exon
subclass of: SO_0000010

position:5255:-1
position: 5255
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5827:-1
position: 5827
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5255-5827:-1:exon

J5O05_RS00050
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 882626
locus tag: J5O05_RS00050
old locus tag: J5O05_00050
EC number: 2.-.-.-
inference: COORDINATES: protein motif:HMM:NF024698.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: GNAT family protein
translation: MFNTKRTLIRRLKQDDVDAIYAHRRSHQTSKYIGPPSTLQDAIERVNQAMKPWTQAEGERLMLGIEHRDTGELIGELMFKYTNKPAGIGEIGYRLAEEYLGQGYGLEVSNGLINYVFEELAAHKIQAIAAVDNIASWKLMEKLGMVREGVLREYMLLPSGYSDAVVYGLLKREWLALNKNKPVPTLQQVC
SIO_010081: J5O05_RS00050
subclass of: SO_0000673
so part of: J5O05_RS00050
location: complement(5255..5827)
location: region:5255-5827:-1
so has part: feature:5255-5827:-1:exon

WP_208841695.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:5255-5827:-1:exon

J5O05_RS00055
type: Gene
subclass of: SO_0000704
RO_0002162: 882626
locus tag: J5O05_RS00055
old locus tag: J5O05_00055
so part of: sequence
location: complement(5830..7002)
location: region:5830-7002:-1
so has part: feature:5830-7002:-1:exon
subclass of: SO_0000010

position:5830:-1
position: 5830
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7002:-1
position: 7002
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5830-7002:-1:exon

J5O05_RS00055
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 882626
locus tag: J5O05_RS00055
old locus tag: J5O05_00055
inference: COORDINATES: similar to AA sequence:RefSeq:WP_010380420.1
GO function: GO:0022857 - transmembrane transporter activity [Evidence IEA]
GO process: GO:0055085 - transmembrane transport [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: MFS transporter
translation: MWVVLAVFLLSCSQLASQIYIPVLPTLGQSLAISETASQALIASYYITLGMSQLITGPSRDRFGDKPVFIAGQMTLILGTLLCTLSQNATLFFIGRILQGIGAASPLLISRTVLSSKLQGPKLKSAMATMAIASSLTSILTPLISGVLSQWFGWQGMSGVLIGYYVLVTLFGLALLESTTNHANSVHPKFLVKQYRALLNQGPFLYVACIKWIPTFLYLTIQLYLPFFLSHTFGYNDHEIGQAMMIPMLGLLFGSTMAKVLQKRFAYLDLVLWFWPILLLGALLFAHTDAALGYLLAYALVMLVFGVYFPVYMHLIGVVEPNNAGTANALVGAVELLVFTLLALAINRWLLDSPLSVALFIGLCALFVLFAWYQLNTRRITELSTPITEK
SIO_010081: J5O05_RS00055
subclass of: SO_0000673
so part of: J5O05_RS00055
location: complement(5830..7002)
location: region:5830-7002:-1
so has part: feature:5830-7002:-1:exon

WP_208841700.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:5830-7002:-1:exon

J5O05_RS00060
type: Gene
subclass of: SO_0000704
RO_0002162: 882626
locus tag: J5O05_RS00060
old locus tag: J5O05_00060
so part of: sequence
location: 7111..8022
location: region:7111-8022:1
so has part: feature:7111-8022:1:exon
subclass of: SO_0000010

position:7111:1
position: 7111
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:8022:1
position: 8022
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7111-8022:1:exon

J5O05_RS00060
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 882626
locus tag: J5O05_RS00060
old locus tag: J5O05_00060
inference: COORDINATES: similar to AA sequence:RefSeq:WP_010369685.1
GO function: GO:0003700 - DNA-binding transcription factor activity [Evidence IEA]
GO process: GO:0006355 - regulation of DNA-templated transcription [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: LysR family transcriptional regulator
translation: MDWLTATKSFEILAQTGSFTKAADLLNISPSAMSKRIDWLEQQLGHTLLVRTTRQVNLTEQGALFLPRVKQWVADFDALLDEAQSSHLEPQGTLKIAATQAVGSTVLMPNIKTFLAQYPKLTIHLNVLPPGAPPDLHHDLVITRYHEEFDSSSLVGRRLIDYQMQMFASPDYLKHHQQIVSLNDVSEHKMLLTNYYQKKGGLVLEDGRVFSFTNYNFVTDHLDAILKAAIQGMGIIFISPHYIEREIRLGLLVPVLPEIKSAKTQLMAYYPKTDFIPYKTKRFFEHLKQNLAKSSTVNVRRVG
SIO_010081: J5O05_RS00060
subclass of: SO_0000673
so part of: J5O05_RS00060
location: 7111..8022
location: region:7111-8022:1
so has part: feature:7111-8022:1:exon

WP_208841696.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:7111-8022:1:exon

J5O05_RS00065
type: Gene
subclass of: SO_0000704
RO_0002162: 882626
locus tag: J5O05_RS00065
old locus tag: J5O05_00065
so part of: sequence
location: 8019..8768
location: region:8019-8768:1
so has part: feature:8019-8768:1:exon
subclass of: SO_0000010

position:8019:1
position: 8019
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:8768:1
position: 8768
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:8019-8768:1:exon

J5O05_RS00065
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 882626
locus tag: J5O05_RS00065
old locus tag: J5O05_00065
inference: COORDINATES: similar to AA sequence:RefSeq:WP_013868265.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: EAL domain-containing protein
translation: MTAKHCEQCRHGNNLDFEFTMAFQPIVSHKNKSIFGYEALVRGVNNEPAGAVIANVNEANRYAFDQSCRVKAIALAAKLGLEGFLSINFLPNAVYQPERCIRTTLEAAEKYHFPTDRIMFEFTENEQIKDADHVKGIVSYYKQQGFLTAIDDFGAGYAGLNLLASYQPNIVKLDMDLVRNIANNKPKQIIAKHTLAMLNELGVTTLVEGIETQAEYHFFANEGVDLMQGYYFAKPAFEALVTVSSERFN
SIO_010081: J5O05_RS00065
subclass of: SO_0000673
so part of: J5O05_RS00065
location: 8019..8768
location: region:8019-8768:1
so has part: feature:8019-8768:1:exon

WP_208841697.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:8019-8768:1:exon

J5O05_RS00070
type: Gene
subclass of: SO_0000704
RO_0002162: 882626
locus tag: J5O05_RS00070
old locus tag: J5O05_00070
so part of: sequence
location: complement(8869..9540)
location: region:8869-9540:-1
so has part: feature:8869-9540:-1:exon
subclass of: SO_0000010

position:8869:-1
position: 8869
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:9540:-1
position: 9540
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:8869-9540:-1:exon

J5O05_RS00070
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 882626
locus tag: J5O05_RS00070
old locus tag: J5O05_00070
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011759206.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DUF2461 domain-containing protein
translation: MFNDNTFAFLNELAQNNDREWFKANQTRYEENVRTPALNLIEAMAPGIRNLSPKLLAVAKKVGGSLMRVQRDTRFSHNKQPYKTNVGIQFRHFLGKDVHAPGLYLHLANDECFLGAGMWRPEGKALNAIRHCMDENPNAYKKALTTLTAAGFELTGESLQRPPRGYDKNHPLIEELKRKDFIAFKNFDRQIATSTDFPDWLLSQWQHTQPLMHYLCFALELDY
SIO_010081: J5O05_RS00070
subclass of: SO_0000673
so part of: J5O05_RS00070
location: complement(8869..9540)
location: region:8869-9540:-1
so has part: feature:8869-9540:-1:exon

WP_208841698.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:8869-9540:-1:exon

J5O05_RS00075
type: Gene
subclass of: SO_0000704
RO_0002162: 882626
locus tag: J5O05_RS00075
old locus tag: J5O05_00075
so part of: sequence
location: complement(9585..9758)
location: region:9585-9758:-1
so has part: feature:9585-9758:-1:exon
subclass of: SO_0000010

position:9585:-1
position: 9585
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:9758:-1
position: 9758
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:9585-9758:-1:exon

J5O05_RS00075
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 882626
locus tag: J5O05_RS00075
old locus tag: J5O05_00075
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MSQFYQARQNNADYRKQLALDILNVYENTTDKSLQNLFNLHLGDEERLNDLKKVAGL
SIO_010081: J5O05_RS00075
subclass of: SO_0000673
so part of: J5O05_RS00075
location: complement(9585..9758)
location: region:9585-9758:-1
so has part: feature:9585-9758:-1:exon

WP_208841699.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:9585-9758:-1:exon

J5O05_RS00080
type: Gene
subclass of: SO_0000704
RO_0002162: 882626
locus tag: J5O05_RS00080
old locus tag: J5O05_00080
pseudo: true
so part of: sequence
location: complement(9697..>10202)
location: region:9697-10202:-1
so has part: feature:9697-10202:-1:exon
subclass of: SO_0000010

position:9697:-1
position: 9697
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:10202:-1
position: 10202
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition

urn:…
SIO_000300: 1
SIO_000628: feature:9697-10202:-1:exon

J5O05_RS00080
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 882626
locus tag: J5O05_RS00080
old locus tag: J5O05_00080
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: incomplete; too short partial abutting assembly gap; missing N-terminus; Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
pseudo: true
codon start: 3
transl table: 11
product: hypothetical protein
SIO_010081: J5O05_RS00080
subclass of: SO_0000673
so part of: J5O05_RS00080
location: complement(9697..>10202)
location: region:9697-10202:-1
so has part: feature:9697-10202:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:9697-10202:-1:exon