Mycetohabitans rhizoxinica HKI 454 plasmid pBRH01, complete sequence.
Bacteria; Pseudomonadota; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Mycetohabitans.
Complete genome sequence of Burkholderia rhizoxinica, an Endosymbiont of Rhizopus microsporus
Submitted (01-SEP-2010) Lackner G., Leibniz Institute for Natural Product, Research, Biomolecular Chemistry, Beutenbergstr. 11a, 07743 Jena, GERMANY
REFSEQ INFORMATION: The reference sequence is identical to\nFR687360.1.\nThe annotation was added by the NCBI Prokaryotic Genome Annotation\nPipeline (PGAP). Information about PGAP can be found here:\nhttps://www.ncbi.nlm.nih.gov/genome/annotation_prok/\n\n##Genome-Annotation-Data-START##\nAnnotation Provider :: NCBI RefSeq\nAnnotation Date :: 12/30/2022 02:26:05\nAnnotation Pipeline :: NCBI Prokaryotic Genome\n Annotation Pipeline (PGAP)\nAnnotation Method :: Best-placed reference protein\n set; GeneMarkS-2+\nAnnotation Software revision :: 6.4\nFeatures Annotated :: Gene; CDS; rRNA; tRNA; ncRNA\nGenes (total) :: 3,345\nCDSs (total) :: 3,284\nGenes (coding) :: 2,875\nCDSs (with protein) :: 2,875\nGenes (RNA) :: 61\nrRNAs :: 3, 3, 3 (5S, 16S, 23S)\ncomplete rRNAs :: 3, 3, 3 (5S, 16S, 23S)\ntRNAs :: 47\nncRNAs :: 5\nPseudo Genes (total) :: 409\nCDSs (without protein) :: 409\nPseudo Genes (ambiguous residues) :: 0 of 409\nPseudo Genes (frameshifted) :: 218 of 409\nPseudo Genes (incomplete) :: 289 of 409\nPseudo Genes (internal stop) :: 82 of 409\nPseudo Genes (multiple problems) :: 145 of 409\n##Genome-Annotation-Data-END##\nCOMPLETENESS: full length.
COORDINATES: ab initio prediction:GeneMarkS-2+
Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
COORDINATES: protein motif:HMM:NF022084.2
Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: similar to AA sequence:RefSeq:WP_008345240.1
COORDINATES: protein motif:HMM:NF015737.2
autotransporter domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_013956919.1
COORDINATES: similar to AA sequence:RefSeq:WP_018441321.1
Lrp/AsnC family transcriptional regulator
COORDINATES: similar to AA sequence:RefSeq:WP_011312213.1
internal stop; incomplete; partial in the middle of a contig; missing C-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: similar to AA sequence:RefSeq:WP_006485763.1
incomplete; partial in the middle of a contig; missing C-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: similar to AA sequence:RefSeq:WP_011355998.1
3-deoxy-7-phosphoheptulonate synthase (EC 2.5.1.54)
COORDINATES: similar to AA sequence:RefSeq:WP_010109202.1
GO:0003849 - 3-deoxy-7-phosphoheptulonate synthase activity [Evidence IEA]
GO:0009423 - chorismate biosynthetic process [Evidence IEA]
Acetate CoA-transferase alpha subunit (EC 2.8.3.8)
COORDINATES: similar to AA sequence:RefSeq:WP_014251089.1
GO:0008775 - acetate CoA-transferase activity [Evidence IEA]
GO:0006084 - acetyl-CoA metabolic process [Evidence IEA]
putative ATPases involved in pili biogenesis
COORDINATES: similar to AA sequence:RefSeq:WP_017233676.1
COORDINATES: similar to AA sequence:RefSeq:WP_011300790.1
COORDINATES: similar to AA sequence:RefSeq:WP_008354295.1
COORDINATES: similar to AA sequence:RefSeq:WP_006047069.1
Thiol:disulfide interchange protein DsbC
COORDINATES: protein motif:HMM:NF024498.2
COORDINATES: similar to AA sequence:RefSeq:WP_008645063.1
internal stop; incomplete; partial in the middle of a contig; missing N-terminus and C-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
3-hydroxyisobutyrate dehydrogenase and related proteins
COORDINATES: similar to AA sequence:RefSeq:WP_012405419.1
COORDINATES: similar to AA sequence:RefSeq:WP_008923503.1
COORDINATES: similar to AA sequence:RefSeq:WP_013091598.1
COORDINATES: similar to AA sequence:RefSeq:WP_014192730.1
Non-ribosomal peptide synthetase modules (EC 6.3.2.-)
COORDINATES: similar to AA sequence:RefSeq:WP_013428774.1
GO:0031177 - phosphopantetheine binding [Evidence IEA]
GO:0008610 - lipid biosynthetic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_052815087.1
incomplete; partial in the middle of a contig; missing N-terminus and C-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: similar to AA sequence:RefSeq:WP_012403179.1
COORDINATES: similar to AA sequence:RefSeq:WP_010090131.1
GO:0019629 - propionate catabolic process, 2-methylcitrate cycle [Evidence IEA]
2-methylaconitate cis-trans isomerase PrpF
COORDINATES: similar to AA sequence:RefSeq:WP_019719742.1
GO:0047456 - 2-methylisocitrate dehydratase activity [Evidence IEA]
frameshifted; internal stop; Derived by automated computational analysis using gene prediction method: Protein Homology.
Fe/S-dependent 2-methylisocitrate dehydratase AcnD
COORDINATES: similar to AA sequence:RefSeq:WP_007176479.1
GO:0050440 - 2-methylcitrate synthase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_007589393.1
GO:0046421 - methylisocitrate lyase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_003262801.1
GO:0005524 - ATP binding [Evidence IEA]; GO:0000156 - phosphorelay response regulator activity [Evidence IEA]; GO:0043565 - sequence-specific DNA binding [Evidence IEA]; GO:0008134 - transcription factor binding [Evidence IEA]
GO:0000160 - phosphorelay signal transduction system [Evidence IEA]; GO:0019629 - propionate catabolic process, 2-methylcitrate cycle [Evidence IEA]; GO:0006355 - regulation of DNA-templated transcription [Evidence IEA]
propionate catabolism operon regulatory protein PrpR
COORDINATES: similar to AA sequence:RefSeq:WP_017910300.1
COORDINATES: similar to AA sequence:RefSeq:WP_007744281.1
GO:0070403 - NAD+ binding [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011852687.1
frameshifted; incomplete; partial in the middle of a contig; missing N-terminus and C-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
2-aminoethylphosphonate ABC transport system ATP-binding subunit PhnT
COORDINATES: similar to AA sequence:RefSeq:WP_014898667.1
GO:0000160 - phosphorelay signal transduction system [Evidence IEA]; GO:0006355 - regulation of DNA-templated transcription [Evidence IEA]
winged helix-turn-helix domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_006396509.1
GO:0006629 - lipid metabolic process [Evidence IEA]
patatin-like phospholipase family protein
COORDINATES: similar to AA sequence:RefSeq:WP_017424506.1
GO:0055085 - transmembrane transport [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_008923522.1
frameshifted; incomplete; partial in the middle of a contig; missing N-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: protein motif:HMM:NF016857.2
GO:0009015 - N-succinylarginine dihydrolase activity [Evidence IEA]
GO:0006525 - arginine metabolic process [Evidence IEA]
internal stop; Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: similar to AA sequence:RefSeq:WP_006491129.1
group II intron reverse transcriptase/maturase
COORDINATES: similar to AA sequence:RefSeq:WP_013543112.1
COORDINATES: protein motif:HMM:NF025189.2
COORDINATES: protein motif:HMM:NF015038.2
COORDINATES: similar to AA sequence:RefSeq:WP_013436785.1
COORDINATES: similar to AA sequence:RefSeq:WP_076612266.1
GO:0003677 - DNA binding [Evidence IEA]; GO:0004803 - transposase activity [Evidence IEA]
GO:0006313 - transposition, DNA-mediated [Evidence IEA]
frameshifted; incomplete; partial in the middle of a contig; missing C-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
Transcriptional regulator, Cro/CI family
COORDINATES: protein motif:HMM:NF024949.2
helix-turn-helix transcriptional regulator
COORDINATES: similar to AA sequence:RefSeq:WP_018444072.1
4Fe-4S cluster-binding domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_004544985.1
GO:0004803 - transposase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF033542.1
COORDINATES: similar to AA sequence:RefSeq:WP_013428324.1
incomplete; partial in the middle of a contig; missing N-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
non-ribosomal peptide synthase/polyketide synthase
COORDINATES: similar to AA sequence:RefSeq:WP_007182754.1
COORDINATES: protein motif:HMM:NF012744.2
COORDINATES: similar to AA sequence:RefSeq:WP_012363497.1
polysaccharide deacetylase family protein
COORDINATES: similar to AA sequence:RefSeq:WP_008919910.1
GO:0006355 - regulation of DNA-templated transcription [Evidence IEA]
H-NS family nucleoid-associated regulatory protein
COORDINATES: similar to AA sequence:RefSeq:WP_018442019.1
2,4-dihydroxyhept-2-ene-1,7-dioic acid aldolase (EC 4.1.2.-)
COORDINATES: similar to AA sequence:RefSeq:WP_019255021.1
GO:0018802 - 2,4-dihydroxyhept-2-ene-1,7-dioate aldolase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_008922168.1
COORDINATES: similar to AA sequence:RefSeq:WP_011491484.1
COORDINATES: protein motif:HMM:NF014349.2
COORDINATES: similar to AA sequence:RefSeq:WP_076612105.1
programmed frameshift; Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: similar to AA sequence:RefSeq:WP_003263120.1
COORDINATES: protein motif:HMM:NF028171.2
carbamoyltransferase C-terminal domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_013435803.1
GO:0008168 - methyltransferase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF012873.2
COORDINATES: protein motif:HMM:NF003417.0
amino acid adenylation domain-containing protein
COORDINATES: protein motif:HMM:NF013166.2
GO:0009058 - biosynthetic process [Evidence IEA]
COORDINATES: protein motif:HMM:NF023218.2
GO:0016798 - hydrolase activity, acting on glycosyl bonds [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_015004359.1
COORDINATES: similar to AA sequence:RefSeq:WP_013436823.1
COORDINATES: similar to AA sequence:RefSeq:WP_013428400.1
COORDINATES: similar to AA sequence:RefSeq:WP_014252678.1
GO:0003824 - catalytic activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_009909327.1
GO:0015087 - cobalt ion transmembrane transporter activity [Evidence IEA]; GO:0015095 - magnesium ion transmembrane transporter activity [Evidence IEA]
GO:0006824 - cobalt ion transport [Evidence IEA]; GO:0015693 - magnesium ion transport [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_006498302.1
COORDINATES: similar to AA sequence:RefSeq:WP_012467688.1
COORDINATES: similar to AA sequence:RefSeq:WP_006483955.1
ABC transporter substrate-binding protein
Amino acid ABC transporter permease protein
COORDINATES: similar to AA sequence:RefSeq:WP_009771414.1
COORDINATES: similar to AA sequence:RefSeq:WP_004521592.1
COORDINATES: similar to AA sequence:RefSeq:WP_013953968.1
frameshifted; Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: similar to AA sequence:RefSeq:WP_018422629.1
COORDINATES: similar to AA sequence:RefSeq:WP_015002312.1
COORDINATES: similar to AA sequence:RefSeq:WP_014973117.1
COORDINATES: similar to AA sequence:RefSeq:WP_006396741.1
COORDINATES: similar to AA sequence:RefSeq:WP_018601942.1
GO:0006303 - double-strand break repair via nonhomologous end joining [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR00633.1
COORDINATES: similar to AA sequence:RefSeq:WP_006410698.1
COORDINATES: similar to AA sequence:RefSeq:WP_008919003.1
COORDINATES: similar to AA sequence:RefSeq:WP_013092770.1
COORDINATES: similar to AA sequence:RefSeq:WP_016344779.1
COORDINATES: similar to AA sequence:RefSeq:WP_013435801.1
COORDINATES: similar to AA sequence:RefSeq:WP_013428391.1
COORDINATES: similar to AA sequence:RefSeq:WP_004523774.1
COORDINATES: similar to AA sequence:RefSeq:WP_015603072.1
GO:0000160 - phosphorelay signal transduction system [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_017684881.1
Aromatic-amino-acid aminotransferase (EC 2.6.1.57)
COORDINATES: similar to AA sequence:RefSeq:WP_011519349.1
Aromatic amino acid transport protein aroP
COORDINATES: similar to AA sequence:RefSeq:WP_011300618.1
GO:0022857 - transmembrane transporter activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_010812428.1
Lrp/AsnC ligand binding domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_008918782.1
COORDINATES: similar to AA sequence:RefSeq:WP_011489107.1
GO:0016405 - CoA-ligase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_020065399.1
COORDINATES: similar to AA sequence:RefSeq:WP_020065400.1
COORDINATES: similar to AA sequence:RefSeq:WP_011489103.1
GO:0016830 - carbon-carbon lyase activity [Evidence IEA]
GO:0010128 - benzoate catabolic process via CoA ligation [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_015003274.1
GO:0051213 - dioxygenase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_018421130.1
COORDINATES: similar to AA sequence:RefSeq:WP_013588636.1
COORDINATES: similar to AA sequence:RefSeq:WP_006396442.1
Part of the ABC transporter complexes LivFGHMJ and LivFGHMK involved in the high-affinity transport of branched-chain amino acids; LivFGHMK is specific for the transport of leucine, while LivFGHMJ is a transporter for leucine, isoleucine, and valine; incomplete; partial in the middle of a contig; missing N-terminus and C-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
high-affinity branched-chain amino acid ABC transporter ATP-binding protein LivG
COORDINATES: similar to AA sequence:RefSeq:WP_006161614.1
branched-chain amino acid ABC transporter ATP-binding protein
COORDINATES: similar to AA sequence:RefSeq:WP_007181185.1
GO:0032784 - regulation of DNA-templated transcription elongation [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011355689.1
COORDINATES: similar to AA sequence:RefSeq:WP_003804053.1
type II toxin-antitoxin system RelB/DinJ family antitoxin
COORDINATES: protein motif:HMM:NF012245.2
COORDINATES: similar to AA sequence:RefSeq:WP_008917356.1
COORDINATES: similar to AA sequence:RefSeq:WP_012400196.1
sigma-54 dependent transcriptional regulator
COORDINATES: similar to AA sequence:RefSeq:WP_008917846.1
Acyl-CoA dehydrogenase, short-chain specific (EC 1.3.99.2)
COORDINATES: protein motif:HMM:NF019640.2
COORDINATES: similar to AA sequence:RefSeq:WP_008650019.1
Crp/Fnr family transcriptional regulator
COORDINATES: similar to AA sequence:RefSeq:WP_004540999.1
undecaprenyl-phosphate glucose phosphotransferase
COORDINATES: similar to AA sequence:RefSeq:WP_010101694.1
GO:0015159 - polysaccharide transmembrane transporter activity [Evidence IEA]
GO:0015774 - polysaccharide transport [Evidence IEA]
polysaccharide biosynthesis/export family protein
Chain length regulator (capsular polysaccharide biosynthesis) / Tyrosine-protein kinase (capsular polysaccharide biosynthesis)
COORDINATES: similar to AA sequence:RefSeq:WP_013428465.1
GO:0045226 - extracellular polysaccharide biosynthetic process [Evidence IEA]
polysaccharide biosynthesis tyrosine autokinase
COORDINATES: similar to AA sequence:RefSeq:WP_015602310.1
COORDINATES: similar to AA sequence:RefSeq:WP_012427765.1
sigma-54-dependent Fis family transcriptional regulator
COORDINATES: protein motif:HMM:NF012698.2
COORDINATES: similar to AA sequence:RefSeq:WP_009890522.1
COORDINATES: similar to AA sequence:RefSeq:WP_011488607.1
GO:0009279 - cell outer membrane [Evidence IEA]
GO:0015288 - porin activity [Evidence IEA]
efflux transporter outer membrane subunit
Acriflavin resistance plasma membrane protein
COORDINATES: similar to AA sequence:RefSeq:WP_015002455.1
COORDINATES: similar to AA sequence:RefSeq:WP_013339459.1
GO:0005215 - transporter activity [Evidence IEA]
efflux RND transporter periplasmic adaptor subunit
COORDINATES: similar to AA sequence:RefSeq:WP_013089638.1
TetR/AcrR family transcriptional regulator
COORDINATES: similar to AA sequence:RefSeq:WP_013339453.1
Acyl-coenzyme A:6-aminopenicillanic-acid-acyltransferase precursor (EC 2.3.1.-)
COORDINATES: similar to AA sequence:RefSeq:WP_012433281.1
C45 family autoproteolytic acyltransferase/hydolase
COORDINATES: similar to AA sequence:RefSeq:WP_013588167.1
GO:0005247 - voltage-gated chloride channel activity [Evidence IEA]
GO:0006821 - chloride transport [Evidence IEA]; GO:0055085 - transmembrane transport [Evidence IEA]
ClcB-like voltage-gated chloride channel protein
COORDINATES: similar to AA sequence:RefSeq:WP_017775931.1
COORDINATES: similar to AA sequence:RefSeq:WP_014191551.1
COORDINATES: similar to AA sequence:RefSeq:WP_013089629.1
LysR substrate-binding domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_017332133.1
COORDINATES: protein motif:HMM:NF013718.2
COORDINATES: protein motif:HMM:NF022672.2
COORDINATES: similar to AA sequence:RefSeq:WP_004192972.1
saccharopine dehydrogenase family protein
COORDINATES: similar to AA sequence:RefSeq:WP_017332119.1
COORDINATES: similar to AA sequence:RefSeq:WP_007181728.1
GO:0016682 - oxidoreductase activity, acting on diphenols and related substances as donors, oxygen as acceptor [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_010093343.1
COORDINATES: similar to AA sequence:RefSeq:WP_017775407.1
COORDINATES: similar to AA sequence:RefSeq:WP_011491521.1
COORDINATES: similar to AA sequence:RefSeq:WP_012339747.1
GO:0003935 - GTP cyclohydrolase II activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_006999095.1
COORDINATES: similar to AA sequence:RefSeq:WP_006764256.1
COORDINATES: similar to AA sequence:RefSeq:WP_016392816.1
COORDINATES: similar to AA sequence:RefSeq:WP_012004767.1
sulfite exporter TauE/SafE family protein
Pyoverdin chromophore biosynthetic protein pvcC
COORDINATES: similar to AA sequence:RefSeq:WP_015922344.1
4-hydroxyphenylacetate 3-hydroxylase N-terminal domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_013428497.1
aromatic ring-hydroxylating dioxygenase subunit alpha
COORDINATES: similar to AA sequence:RefSeq:WP_003200911.1
GO:0008483 - transaminase activity [Evidence IEA]
GO:0019491 - ectoine biosynthetic process [Evidence IEA]
diaminobutyrate--2-oxoglutarate transaminase family protein
L-ornithine 5-monooxygenase (EC 1.13.12.-)
COORDINATES: similar to AA sequence:RefSeq:WP_017371937.1
COORDINATES: protein motif:HMM:NF016207.2
FMN-binding negative transcriptional regulator
COORDINATES: similar to AA sequence:RefSeq:WP_008922679.1
GO:0005524 - ATP binding [Evidence IEA]; GO:0016887 - ATP hydrolysis activity [Evidence IEA]
GO:0051301 - cell division [Evidence IEA]
COORDINATES: protein motif:HMM:NF025903.2
GO:0015074 - DNA integration [Evidence IEA]
integrase core domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_012339008.1
COORDINATES: similar to AA sequence:RefSeq:WP_004202502.1
GO:0022627 - cytosolic small ribosomal subunit [Evidence IEA]; GO:0000314 - organellar small ribosomal subunit [Evidence IEA]
GO:0003735 - structural constituent of ribosome [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_007178493.1
COORDINATES: protein motif:HMM:NF013117.2
COORDINATES: protein motif:HMM:NF015355.2
2-hydroxycarboxylate transporter family protein
COORDINATES: protein motif:HMM:NF012759.2
COORDINATES: protein motif:HMM:NF012711.2
COORDINATES: similar to AA sequence:RefSeq:WP_009301345.1
COORDINATES: similar to AA sequence:RefSeq:WP_004931883.1
COORDINATES: protein motif:HMM:NF025007.2
COORDINATES: protein motif:HMM:NF014698.2
GO:0016491 - oxidoreductase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_008922957.1
aspartate aminotransferase family protein
COORDINATES: protein motif:HMM:TIGR00797.1
COORDINATES: similar to AA sequence:RefSeq:WP_017774927.1
Large-conductance mechanosensitive channel
COORDINATES: similar to AA sequence:RefSeq:WP_020065887.1
GO:0008381 - mechanosensitive monoatomic ion channel activity [Evidence IEA]
GO:0034220 - monoatomic ion transmembrane transport [Evidence IEA]
large conductance mechanosensitive channel protein MscL
COORDINATES: similar to AA sequence:RefSeq:WP_003548538.1
COORDINATES: protein motif:HMM:NF014564.2
CaiB/BaiF CoA-transferase family protein
COORDINATES: similar to AA sequence:RefSeq:NP_250322.1
GO:0016627 - oxidoreductase activity, acting on the CH-CH group of donors [Evidence IEA]
frameshifted; internal stop; incomplete; partial in the middle of a contig; missing N-terminus and C-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: protein motif:HMM:NF015501.2
COORDINATES: similar to AA sequence:RefSeq:WP_012666691.1
neuraminidase-like domain-containing protein
COORDINATES: protein motif:HMM:NF015497.2
SpvB/TcaC N-terminal domain-containing protein
COORDINATES: protein motif:HMM:TIGR03696.1
RHS repeat-associated core domain-containing protein
COORDINATES: protein motif:HMM:NF037238.2
COORDINATES: protein motif:HMM:NF036757.2
COORDINATES: similar to AA sequence:RefSeq:WP_013184386.1
COORDINATES: similar to AA sequence:RefSeq:WP_006402886.1
GO:0004157 - dihydropyrimidinase activity [Evidence IEA]
GO:0008152 - metabolic process [Evidence IEA]
Dihydropyrimidine dehydrogenase [NADP+] beta subunit (EC 1.3.1.2)
COORDINATES: similar to AA sequence:RefSeq:WP_007585505.1
GO:0017113 - dihydropyrimidine dehydrogenase (NADP+) activity [Evidence IEA]
GO:0006210 - thymine catabolic process [Evidence IEA]; GO:0006212 - uracil catabolic process [Evidence IEA]
NAD-dependent dihydropyrimidine dehydrogenase subunit PreA
COORDINATES: similar to AA sequence:RefSeq:WP_012217800.1
N-carbamoyl-L-amino acid hydrolase (EC 3.5.1.87)
COORDINATES: similar to AA sequence:RefSeq:WP_013093994.1
ENOYL-[ACYL-CARRIER-PROTEIN] REDUCTASE (fabL) (NADPH) (EC 1.3.1.9)
COORDINATES: protein motif:HMM:NF040052.1
COORDINATES: similar to AA sequence:RefSeq:WP_005275261.1
Uracil DNA glycosylase superfamily protein
COORDINATES: similar to AA sequence:RefSeq:WP_004537242.1
COORDINATES: similar to AA sequence:RefSeq:WP_016345353.1
COORDINATES: similar to AA sequence:RefSeq:WP_011852989.1
COORDINATES: similar to AA sequence:RefSeq:WP_006482221.1
GO:0003700 - DNA-binding transcription factor activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_013428417.1
COORDINATES: similar to AA sequence:RefSeq:WP_007181392.1
COORDINATES: similar to AA sequence:RefSeq:WP_014191705.1
COORDINATES: similar to AA sequence:RefSeq:WP_010092023.1
S-adenosylmethionine:2-demethylmenaquinone methyltransferase
COORDINATES: similar to AA sequence:RefSeq:WP_018007662.1
COORDINATES: similar to AA sequence:RefSeq:WP_012366507.1
type II toxin-antitoxin system prevent-host-death family antitoxin
COORDINATES: similar to AA sequence:RefSeq:WP_012339674.1
COORDINATES: similar to AA sequence:RefSeq:WP_076611812.1
COORDINATES: nucleotide motif:Rfam:14.4:RF01497
AL1L pseudoknot; Derived by automated computational analysis using gene prediction method: cmsearch.
frameshifted; internal stop; incomplete; partial in the middle of a contig; missing C-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: similar to AA sequence:RefSeq:WP_012354406.1
internal stop; incomplete; partial in the middle of a contig; missing N-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: similar to AA sequence:RefSeq:WP_011493206.1
COORDINATES: similar to AA sequence:RefSeq:WP_006397350.1
IS21-like element ISBmu3 family helper ATPase IstB
COORDINATES: similar to AA sequence:RefSeq:WP_012213865.1
COORDINATES: similar to AA sequence:RefSeq:WP_013435062.1
COORDINATES: similar to AA sequence:RefSeq:WP_012406703.1
COORDINATES: similar to AA sequence:RefSeq:WP_006759705.1
type II toxin-antitoxin system VapB family antitoxin
COORDINATES: similar to AA sequence:RefSeq:WP_006754107.1
type II toxin-antitoxin system VapC family toxin
COORDINATES: similar to AA sequence:RefSeq:WP_004197697.1
GO:0015074 - DNA integration [Evidence IEA]; GO:0006310 - DNA recombination [Evidence IEA]
frameshifted; internal stop; incomplete; partial in the middle of a contig; missing N-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: similar to AA sequence:RefSeq:WP_010097403.1
putative addiction module antidote protein
COORDINATES: similar to AA sequence:RefSeq:WP_010097401.1
type II toxin-antitoxin system RelE/ParE family toxin
COORDINATES: similar to AA sequence:RefSeq:WP_007580625.1
COORDINATES: similar to AA sequence:RefSeq:WP_013436789.1
COORDINATES: similar to AA sequence:RefSeq:WP_013436805.1
COORDINATES: similar to AA sequence:RefSeq:WP_018420594.1
COORDINATES: similar to AA sequence:RefSeq:WP_006397259.1
type II toxin-antitoxin system ChpB family toxin
COORDINATES: similar to AA sequence:RefSeq:WP_006713120.1
COORDINATES: similar to AA sequence:RefSeq:WP_013124610.1
type II toxin-antitoxin system YafQ family toxin
COORDINATES: similar to AA sequence:RefSeq:WP_012536826.1
COORDINATES: similar to AA sequence:RefSeq:WP_013428697.1
COORDINATES: similar to AA sequence:RefSeq:WP_076612154.1
COORDINATES: similar to AA sequence:RefSeq:WP_013428641.1
DNA integration/recombination/inversion protein
COORDINATES: similar to AA sequence:RefSeq:WP_013436771.1
COORDINATES: similar to AA sequence:RefSeq:WP_076611481.1
COORDINATES: similar to AA sequence:RefSeq:WP_011881631.1
COORDINATES: similar to AA sequence:RefSeq:WP_076611643.1
COORDINATES: similar to AA sequence:RefSeq:WP_004922392.1
3-oxoacyl-[acyl-carrier-protein] synthase III C-terminal domain-containing protein
D-alanine-activating enzyme (EC 6.3.2.-)
Isovaleryl-CoA dehydrogenase (EC 1.3.99.10)
COORDINATES: similar to AA sequence:RefSeq:WP_013435685.1
COORDINATES: similar to AA sequence:RefSeq:WP_011493845.1
COORDINATES: similar to AA sequence:RefSeq:WP_011147726.1
Rpn family recombination-promoting nuclease/putative transposase
COORDINATES: similar to AA sequence:RefSeq:WP_001567368.1
COORDINATES: similar to AA sequence:RefSeq:WP_019915318.1
COORDINATES: similar to AA sequence:RefSeq:WP_013435358.1
type II toxin-antitoxin system Phd/YefM family antitoxin
COORDINATES: similar to AA sequence:RefSeq:WP_076612410.1
COORDINATES: similar to AA sequence:RefSeq:WP_012701037.1
GO:0003964 - RNA-directed DNA polymerase activity [Evidence IEA]
GO:0000373 - Group II intron splicing [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_006028471.1
COORDINATES: similar to AA sequence:RefSeq:WP_012493229.1
COORDINATES: similar to AA sequence:RefSeq:WP_011000796.1
COORDINATES: similar to AA sequence:RefSeq:WP_017878279.1
phosphodiester glycosidase family protein
COORDINATES: protein motif:HMM:NF014571.2
GO:0046353 - aminoglycoside 3-N-acetyltransferase activity [Evidence IEA]
GO:0046677 - response to antibiotic [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_010489594.1
Cyanide-insensitive cytochrome bd-type quinol oxidase subunit II (EC 1.10.3.-)
COORDINATES: similar to AA sequence:RefSeq:WP_011617058.1
cytochrome d ubiquinol oxidase subunit II
COORDINATES: similar to AA sequence:RefSeq:WP_017939772.1
COORDINATES: similar to AA sequence:RefSeq:WP_017777895.1
GO:0008199 - ferric iron binding [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_012433645.1
COORDINATES: similar to AA sequence:RefSeq:WP_014004127.1
COORDINATES: nucleotide motif:Rfam:14.4:RF00059
TPP riboswitch; Derived by automated computational analysis using gene prediction method: cmsearch.
COORDINATES: similar to AA sequence:RefSeq:WP_013697214.1
GO:0051536 - iron-sulfur cluster binding [Evidence IEA]
GO:0009228 - thiamine biosynthetic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011402513.1
GO:0019867 - outer membrane [Evidence IEA]
glycine zipper 2TM domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_012433660.1
COORDINATES: similar to AA sequence:RefSeq:WP_008923872.1
GO:0003747 - translation release factor activity [Evidence IEA]
GO:0006415 - translational termination [Evidence IEA]
alternative ribosome rescue aminoacyl-tRNA hydrolase ArfB
COORDINATES: similar to AA sequence:RefSeq:WP_006483714.1
COORDINATES: similar to AA sequence:RefSeq:WP_012363476.1
GO:0009338 - exodeoxyribonuclease V complex [Evidence IEA]
GO:0008854 - exodeoxyribonuclease V activity [Evidence IEA]
GO:0006310 - DNA recombination [Evidence IEA]; GO:0006281 - DNA repair [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_013339582.1
COORDINATES: similar to AA sequence:RefSeq:WP_018432267.1
Sensory transduction protein kinase (EC 2.7.3.-)
COORDINATES: similar to AA sequence:RefSeq:WP_008118089.1
COORDINATES: similar to AA sequence:RefSeq:WP_013339593.1
COORDINATES: similar to AA sequence:RefSeq:WP_018435396.1
COORDINATES: similar to AA sequence:RefSeq:WP_007584038.1
COORDINATES: similar to AA sequence:RefSeq:WP_011885442.1
GO:0004386 - helicase activity [Evidence IEA]
GO:0006139 - nucleobase-containing compound metabolic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_003268436.1
GO:0004042 - acetyl-CoA:L-glutamate N-acetyltransferase activity [Evidence IEA]
GO:0006526 - arginine biosynthetic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_006401987.1
GO:0005506 - iron ion binding [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_006026043.1
COORDINATES: similar to AA sequence:RefSeq:WP_017331722.1
GO:0008784 - alanine racemase activity [Evidence IEA]
GO:0009252 - peptidoglycan biosynthetic process [Evidence IEA]
Lysophospholipid transporter family protein
COORDINATES: similar to AA sequence:RefSeq:WP_011885164.1
COORDINATES: similar to AA sequence:RefSeq:WP_010092038.1
GO:0008902 - hydroxymethylpyrimidine kinase activity [Evidence IEA]; GO:0008972 - phosphomethylpyrimidine kinase activity [Evidence IEA]
bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase
COORDINATES: similar to AA sequence:RefSeq:WP_015600322.1
COORDINATES: similar to AA sequence:RefSeq:WP_006407727.1
COORDINATES: similar to AA sequence:RefSeq:WP_004191864.1
GO:0008999 - peptide-alanine-alpha-N-acetyltransferase activity [Evidence IEA]
GO:0036211 - protein modification process [Evidence IEA]; GO:0042254 - ribosome biogenesis [Evidence IEA]
ribosomal protein S18-alanine N-acetyltransferase
COORDINATES: similar to AA sequence:RefSeq:WP_014896708.1
GO:0003725 - double-stranded RNA binding [Evidence IEA]
GO:0006400 - tRNA modification [Evidence IEA]
tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex dimerization subunit type 1 TsaB
COORDINATES: similar to AA sequence:RefSeq:WP_006763999.1
GO:0000062 - fatty-acyl-CoA binding [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_017778110.1
COORDINATES: similar to AA sequence:RefSeq:WP_009931004.1
GO:0004451 - isocitrate lyase activity [Evidence IEA]
GO:0019752 - carboxylic acid metabolic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_013698546.1
COORDINATES: similar to AA sequence:RefSeq:WP_018417612.1
GO:0004474 - malate synthase activity [Evidence IEA]
GO:0006099 - tricarboxylic acid cycle [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_013436832.1
COORDINATES: similar to AA sequence:RefSeq:WP_013092495.1
COORDINATES: similar to AA sequence:RefSeq:WP_011545782.1
COORDINATES: similar to AA sequence:RefSeq:WP_006497208.1
COORDINATES: similar to AA sequence:RefSeq:WP_013538605.1
isocitrate lyase/phosphoenolpyruvate mutase family protein
COORDINATES: protein motif:HMM:NF022731.2
COORDINATES: similar to AA sequence:RefSeq:WP_006052439.1
COORDINATES: similar to AA sequence:RefSeq:WP_019402394.1
COORDINATES: similar to AA sequence:RefSeq:WP_014528021.1
COORDINATES: similar to AA sequence:RefSeq:WP_014631445.1
COORDINATES: similar to AA sequence:RefSeq:WP_013433961.1
COORDINATES: protein motif:HMM:NF015431.2
COORDINATES: similar to AA sequence:RefSeq:WP_013091389.1
COORDINATES: protein motif:HMM:NF012655.2
6-oxohexanoate dehydrogenase (EC 1.2.1.63)
COORDINATES: similar to AA sequence:RefSeq:WP_006397042.1
NAD-dependent succinate-semialdehyde dehydrogenase
COORDINATES: similar to AA sequence:RefSeq:WP_006024271.1
GO:0004055 - argininosuccinate synthase activity [Evidence IEA]; GO:0005524 - ATP binding [Evidence IEA]; GO:0042803 - protein homodimerization activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF016255.2
COORDINATES: similar to AA sequence:RefSeq:WP_004550412.1
COORDINATES: similar to AA sequence:RefSeq:WP_015003658.1
COORDINATES: similar to AA sequence:RefSeq:WP_013092887.1
COORDINATES: similar to AA sequence:RefSeq:WP_008905403.1
COORDINATES: similar to AA sequence:RefSeq:WP_006399020.1
GO:0009380 - excinuclease repair complex [Evidence IEA]
GO:0009381 - excinuclease ABC activity [Evidence IEA]
GO:0006289 - nucleotide-excision repair [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_007182455.1
COORDINATES: similar to AA sequence:RefSeq:WP_017329783.1
GO:0102039 - NADH-dependent peroxiredoxin activity [Evidence IEA]
GO:0006979 - response to oxidative stress [Evidence IEA]
Peroxiredoxin reductase (NAD(P)H) (EC 1.8.1.-) / NADH oxidase H2O2-forming (EC 1.6.3.-)
COORDINATES: similar to AA sequence:RefSeq:WP_006403836.1
GO:0016668 - oxidoreductase activity, acting on a sulfur group of donors, NAD(P) as acceptor [Evidence IEA]
GO:0009398 - FMN biosynthetic process [Evidence IEA]; GO:0006805 - xenobiotic metabolic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_018443676.1
COORDINATES: similar to AA sequence:RefSeq:WP_013428427.1
COORDINATES: similar to AA sequence:RefSeq:WP_013428320.1
COORDINATES: similar to AA sequence:RefSeq:WP_009899435.1
COORDINATES: similar to AA sequence:RefSeq:WP_013091532.1
COORDINATES: similar to AA sequence:RefSeq:WP_012426901.1
COORDINATES: similar to AA sequence:RefSeq:WP_006027738.1
COORDINATES: similar to AA sequence:RefSeq:WP_007582956.1
COORDINATES: similar to AA sequence:RefSeq:WP_009890055.1
lysylphosphatidylglycerol synthase domain-containing protein
cellobiose phosphotransferase system celC
COORDINATES: similar to AA sequence:RefSeq:WP_006755247.1
GO:0005975 - carbohydrate metabolic process [Evidence IEA]
hopanoid biosynthesis-associated protein HpnK
COORDINATES: similar to AA sequence:RefSeq:WP_007181785.1
GO:0003824 - catalytic activity [Evidence IEA]; GO:0051536 - iron-sulfur cluster binding [Evidence IEA]
hopanoid biosynthesis associated radical SAM protein HpnJ
Ceramide glucosyltransferase (EC 2.4.1.80)
COORDINATES: similar to AA sequence:RefSeq:WP_013089564.1
GO:0016757 - glycosyltransferase activity [Evidence IEA]
bacteriohopanetetrol glucosamine biosynthesis glycosyltransferase HpnI
COORDINATES: similar to AA sequence:RefSeq:WP_011204762.1
COORDINATES: similar to AA sequence:RefSeq:WP_013436573.1
COORDINATES: similar to AA sequence:RefSeq:WP_011970843.1
COORDINATES: similar to AA sequence:RefSeq:WP_018210152.1
COORDINATES: similar to AA sequence:RefSeq:WP_011970839.1
COORDINATES: similar to AA sequence:RefSeq:WP_014248533.1
molybdopterin-synthase adenylyltransferase MoeB
COORDINATES: similar to AA sequence:RefSeq:WP_011970837.1
COORDINATES: protein motif:HMM:NF014661.2
COORDINATES: similar to AA sequence:RefSeq:WP_014530968.1
Nif11-like leader peptide family RiPP precursor
COORDINATES: protein motif:HMM:TIGR03897.1
type 2 lanthipeptide synthetase LanM family protein
COORDINATES: protein motif:HMM:NF040692.1
Lipopolysaccharide heptosyltransferase-1 (EC 2.-.-.-)
COORDINATES: similar to AA sequence:RefSeq:WP_017774530.1
GO:0008920 - lipopolysaccharide heptosyltransferase activity [Evidence IEA]
GO:0009244 - lipopolysaccharide core region biosynthetic process [Evidence IEA]
lipopolysaccharide heptosyltransferase I
COORDINATES: similar to AA sequence:RefSeq:WP_016344811.1
COORDINATES: similar to AA sequence:RefSeq:WP_012404329.1
COORDINATES: similar to AA sequence:RefSeq:WP_018439075.1
COORDINATES: similar to AA sequence:RefSeq:WP_018443742.1
COORDINATES: similar to AA sequence:RefSeq:WP_017772735.1
GO:0004370 - glycerol kinase activity [Evidence IEA]
GO:0006071 - glycerol metabolic process [Evidence IEA]
COORDINATES: protein motif:HMM:NF024591.2
COORDINATES: similar to AA sequence:RefSeq:WP_006751644.1
COORDINATES: similar to AA sequence:RefSeq:WP_015003286.1
COORDINATES: similar to AA sequence:RefSeq:WP_017334346.1
GO:0006631 - fatty acid metabolic process [Evidence IEA]
3-hydroxyacyl-CoA dehydrogenase NAD-binding domain-containing protein
COORDINATES: protein motif:HMM:NF012772.2
COORDINATES: similar to AA sequence:RefSeq:WP_018424759.1
GO:0050661 - NADP binding [Evidence IEA]; GO:0004616 - phosphogluconate dehydrogenase (decarboxylating) activity [Evidence IEA]
GO:0006098 - pentose-phosphate shunt [Evidence IEA]
NADP-dependent phosphogluconate dehydrogenase
COORDINATES: protein motif:HMM:NF019310.2
COORDINATES: similar to AA sequence:RefSeq:WP_011349461.1
COORDINATES: similar to AA sequence:RefSeq:WP_011349460.1
COORDINATES: similar to AA sequence:RefSeq:WP_008920032.1
COORDINATES: similar to AA sequence:RefSeq:WP_012425991.1
COORDINATES: similar to AA sequence:RefSeq:WP_007733640.1
GO:0015137 - citrate transmembrane transporter activity [Evidence IEA]
GO:0015746 - citrate transport [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_017233727.1
COORDINATES: similar to AA sequence:RefSeq:WP_076611183.1
COORDINATES: protein motif:HMM:NF018946.2
COORDINATES: similar to AA sequence:RefSeq:WP_006051794.1
COORDINATES: similar to AA sequence:RefSeq:WP_017773087.1
COORDINATES: similar to AA sequence:RefSeq:WP_013343024.1
COORDINATES: similar to AA sequence:RefSeq:WP_011492178.1
COORDINATES: protein motif:HMM:NF018154.2
GO:0005524 - ATP binding [Evidence IEA]; GO:0016301 - kinase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_013436721.1
COORDINATES: similar to AA sequence:RefSeq:WP_015004263.1
COORDINATES: similar to AA sequence:RefSeq:WP_006592333.1
COORDINATES: similar to AA sequence:RefSeq:WP_005672116.1
COORDINATES: protein motif:HMM:NF025079.2
COORDINATES: similar to AA sequence:RefSeq:WP_004637351.1
COORDINATES: similar to AA sequence:RefSeq:WP_012405387.1
COORDINATES: protein motif:HMM:NF026041.2
COORDINATES: similar to AA sequence:RefSeq:WP_010959400.1
COORDINATES: protein motif:HMM:NF013068.2
COORDINATES: similar to AA sequence:RefSeq:WP_013436752.1
COORDINATES: protein motif:HMM:NF017020.2
COORDINATES: similar to AA sequence:RefSeq:WP_013428824.1
COORDINATES: similar to AA sequence:RefSeq:WP_013089215.1
COORDINATES: protein motif:HMM:NF012798.2
COORDINATES: similar to AA sequence:RefSeq:WP_013434223.1
COORDINATES: similar to AA sequence:RefSeq:WP_010120702.1
COORDINATES: similar to AA sequence:RefSeq:WP_013436675.1
COORDINATES: similar to AA sequence:RefSeq:WP_007746091.1
Membrane protease family, stomatin/prohibitin homologs
COORDINATES: similar to AA sequence:RefSeq:WP_008353699.1
COORDINATES: similar to AA sequence:RefSeq:WP_018442274.1
COORDINATES: similar to AA sequence:RefSeq:WP_006683134.1
putative toxin-antitoxin system toxin component, PIN family
COORDINATES: similar to AA sequence:RefSeq:WP_076611077.1
COORDINATES: similar to AA sequence:RefSeq:WP_010812292.1
COORDINATES: similar to AA sequence:RefSeq:WP_011548459.1
COORDINATES: similar to AA sequence:RefSeq:WP_076612267.1
COORDINATES: similar to AA sequence:RefSeq:WP_013428607.1
Quaternary ammonium compound-resistance protein
COORDINATES: similar to AA sequence:RefSeq:WP_013236547.1
COORDINATES: similar to AA sequence:RefSeq:WP_006755591.1
COORDINATES: similar to AA sequence:RefSeq:WP_017235469.1
GO:0016767 - geranylgeranyl-diphosphate geranylgeranyltransferase activity [Evidence IEA]
GO:0016117 - carotenoid biosynthetic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_012428813.1
GO:0051007 - squalene-hopene cyclase activity [Evidence IEA]
GO:0019746 - hopanoid biosynthetic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_018308696.1
COORDINATES: similar to AA sequence:RefSeq:WP_019460559.1
COORDINATES: similar to AA sequence:RefSeq:WP_011301011.1
NAD-dependent epimerase/dehydratase family protein
Molybdenum cofactor biosynthesis protein A
COORDINATES: similar to AA sequence:RefSeq:WP_017235475.1
COORDINATES: similar to AA sequence:RefSeq:WP_006480288.1
GO:0051745 - 4-hydroxy-3-methylbut-2-en-1-yl diphosphate reductase activity [Evidence IEA]; GO:0046872 - metal ion binding [Evidence IEA]
GO:0050992 - dimethylallyl diphosphate biosynthetic process [Evidence IEA]; GO:0019288 - isopentenyl diphosphate biosynthetic process, methylerythritol 4-phosphate pathway [Evidence IEA]
4-hydroxy-3-methylbut-2-enyl diphosphate reductase
COORDINATES: similar to AA sequence:RefSeq:WP_016354178.1
COORDINATES: similar to AA sequence:RefSeq:WP_020068661.1
COORDINATES: similar to AA sequence:RefSeq:WP_017233752.1
GO:0008661 - 1-deoxy-D-xylulose-5-phosphate synthase activity [Evidence IEA]
GO:0009240 - isopentenyl diphosphate biosynthetic process [Evidence IEA]; GO:0008615 - pyridoxine biosynthetic process [Evidence IEA]; GO:0009228 - thiamine biosynthetic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_006049196.1
2-aminoethylphosphonate aminotransferase
COORDINATES: similar to AA sequence:RefSeq:WP_007743463.1
GO:0033980 - phosphonopyruvate decarboxylase activity [Evidence IEA]
GO:0017000 - antibiotic biosynthetic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011516537.1
GO:0050188 - phosphoenolpyruvate mutase activity [Evidence IEA]
GO:0019634 - organic phosphonate metabolic process [Evidence IEA]
Mannose-1-phosphate guanyltransferase (EC 2.7.7.13)
COORDINATES: similar to AA sequence:RefSeq:WP_018423586.1
phosphocholine cytidylyltransferase family protein
COORDINATES: similar to AA sequence:RefSeq:WP_007746267.1
COORDINATES: similar to AA sequence:RefSeq:WP_009771218.1
COORDINATES: similar to AA sequence:RefSeq:WP_015877396.1
CDP-alcohol phosphatidyltransferase family protein
COORDINATES: similar to AA sequence:RefSeq:WP_006027123.1
GO:0006812 - monoatomic cation transport [Evidence IEA]; GO:0055085 - transmembrane transport [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_007577727.1
dicarboxylate/amino acid:cation symporter
C4-dicarboxylate transport sensor protein dctB (EC 2.7.3.-)
COORDINATES: similar to AA sequence:RefSeq:WP_015001507.1
C4-dicarboxylate transport transcriptional regulatory protein dctD
COORDINATES: similar to AA sequence:RefSeq:WP_014190248.1
COORDINATES: similar to AA sequence:RefSeq:WP_011350236.1
COORDINATES: similar to AA sequence:RefSeq:WP_011549281.1
glycine betaine ABC transporter substrate-binding protein
COORDINATES: similar to AA sequence:RefSeq:WP_013691010.1
Glycine betaine transport ATP-binding protein
COORDINATES: similar to AA sequence:RefSeq:WP_007882229.1
COORDINATES: similar to AA sequence:RefSeq:WP_012328330.1
COORDINATES: similar to AA sequence:RefSeq:WP_006046807.1
COORDINATES: protein motif:HMM:NF012610.2
COORDINATES: similar to AA sequence:RefSeq:WP_006766312.1
Outer membrane porin protein 32 precursor
COORDINATES: similar to AA sequence:RefSeq:WP_011694681.1
COORDINATES: similar to AA sequence:RefSeq:WP_010091148.1
GO:0008556 - P-type potassium transmembrane transporter activity [Evidence IEA]
GO:0006813 - potassium ion transport [Evidence IEA]
potassium-transporting ATPase subunit KdpC
COORDINATES: similar to AA sequence:RefSeq:WP_008350501.1
GO:0031004 - potassium ion-transporting ATPase complex [Evidence IEA]
potassium-transporting ATPase subunit KdpB
Potassium-transporting ATPase A chain (EC 3.6.3.12)
COORDINATES: similar to AA sequence:RefSeq:WP_007733376.1
potassium-transporting ATPase subunit KdpA
COORDINATES: similar to AA sequence:RefSeq:WP_007733375.1
GO:0005886 - plasma membrane [Evidence IEA]
GO:0043462 - regulation of ATP-dependent activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_007175652.1
COORDINATES: similar to AA sequence:RefSeq:WP_006047063.1
COORDINATES: similar to AA sequence:RefSeq:WP_004523329.1
COORDINATES: similar to AA sequence:RefSeq:WP_006767162.1
This protein belongs to the uracil DNA glycosylase superfamily, members of which act in excision repair of DNA. However, it belongs more specifically to UdgX branch, whose founding member was found to bind uracil in DNA (where it does not belong), without cleaving it, appears to promote DNA repair by a pathway involving RecA, rather than base excision; Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: similar to AA sequence:RefSeq:WP_076612348.1
COORDINATES: similar to AA sequence:RefSeq:WP_006785955.1
COORDINATES: similar to AA sequence:RefSeq:WP_076611646.1
COORDINATES: protein motif:HMM:TIGR04475.1
phenylalanine aminomutase (D-beta-phenylalanine forming)
COORDINATES: similar to AA sequence:RefSeq:WP_013184203.1
COORDINATES: protein motif:HMM:NF024880.2
COORDINATES: similar to AA sequence:RefSeq:WP_012732717.1
COORDINATES: similar to AA sequence:RefSeq:WP_011879954.1
COORDINATES: similar to AA sequence:RefSeq:WP_012336638.1
endonuclease/exonuclease/phosphatase family protein
COORDINATES: similar to AA sequence:RefSeq:WP_009961057.1
succinate dehydrogenase/fumarate reductase iron-sulfur subunit
COORDINATES: protein motif:HMM:NF013786.2
GO:0008897 - holo-[acyl-carrier-protein] synthase activity [Evidence IEA]; GO:0000287 - magnesium ion binding [Evidence IEA]
4'-phosphopantetheinyl transferase superfamily protein
Hydroxymethylglutaryl-CoA lyase (EC 4.1.3.4)
COORDINATES: similar to AA sequence:RefSeq:WP_012351470.1
Methylcrotonyl-CoA carboxylase biotin-containing subunit (EC 6.4.1.4)
COORDINATES: similar to AA sequence:RefSeq:WP_013590511.1
biotin carboxylase N-terminal domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_007743073.1
enoyl-CoA hydratase/isomerase family protein
Methylcrotonyl-CoA carboxylase carboxyl transferase subunit (EC 6.4.1.4)
COORDINATES: similar to AA sequence:RefSeq:WP_013690312.1
carboxyl transferase domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_014724024.1
COORDINATES: similar to AA sequence:RefSeq:WP_014972064.1
COORDINATES: similar to AA sequence:RefSeq:WP_014250516.1
COORDINATES: similar to AA sequence:RefSeq:WP_004266888.1
COORDINATES: similar to AA sequence:RefSeq:WP_007587714.1
COORDINATES: similar to AA sequence:RefSeq:WP_006752013.1
COORDINATES: protein motif:HMM:NF023737.2
sugar dehydrogenase complex small subunit
COORDINATES: similar to AA sequence:RefSeq:WP_009771214.1
COORDINATES: similar to AA sequence:RefSeq:WP_009900391.1
alpha-ketoglutarate-dependent dioxygenase AlkB
COORDINATES: similar to AA sequence:RefSeq:WP_006487081.1
COORDINATES: similar to AA sequence:RefSeq:WP_013590280.1
undecaprenyl-phosphate-4-amino-L-arabinose-- lipid A 4-amino-L-arabinosyltransferase
COORDINATES: protein motif:HMM:NF024809.2
GO:0005515 - protein binding [Evidence IEA]
GO:0006749 - glutathione metabolic process [Evidence IEA]
glutathione S-transferase N-terminal domain-containing protein
acetoin dehydrogenase E1 component beta-subunit
COORDINATES: similar to AA sequence:RefSeq:WP_012143682.1
COORDINATES: similar to AA sequence:RefSeq:WP_014192550.1
COORDINATES: similar to AA sequence:RefSeq:WP_004522820.1
COORDINATES: similar to AA sequence:RefSeq:WP_011882068.1
COORDINATES: similar to AA sequence:RefSeq:WP_009892982.1
amino acid--[acyl-carrier-protein] ligase
COORDINATES: similar to AA sequence:RefSeq:WP_008920198.1
COORDINATES: similar to AA sequence:RefSeq:WP_011355410.1
COORDINATES: similar to AA sequence:RefSeq:WP_004547140.1
COORDINATES: similar to AA sequence:RefSeq:WP_007586642.1
COORDINATES: similar to AA sequence:RefSeq:WP_011657937.1
COORDINATES: protein motif:HMM:NF012257.2
helix-turn-helix domain-containing protein
COORDINATES: protein motif:HMM:NF013080.2
COORDINATES: similar to AA sequence:RefSeq:WP_013428949.1
GO:0003700 - DNA-binding transcription factor activity [Evidence IEA]; GO:0043565 - sequence-specific DNA binding [Evidence IEA]
COORDINATES: protein motif:HMM:NF015831.2
COORDINATES: protein motif:HMM:NF021153.2
HrpB1 family type III secretion system apparatus protein
COORDINATES: similar to AA sequence:RefSeq:WP_013341107.1
COORDINATES: similar to AA sequence:RefSeq:WP_012733114.1
type III secretion system outer membrane ring subunit SctC
COORDINATES: similar to AA sequence:RefSeq:WP_013592477.1
COORDINATES: protein motif:HMM:NF023363.2
COORDINATES: similar to AA sequence:RefSeq:WP_018314638.1
GO:0030254 - protein secretion by the type III secretion system [Evidence IEA]
type III secretion system export apparatus subunit SctT
COORDINATES: protein motif:HMM:NF021035.2
COORDINATES: similar to AA sequence:RefSeq:WP_006047126.1
GO:0030257 - type III protein secretion system complex [Evidence IEA]
GO:0046961 - proton-transporting ATPase activity, rotational mechanism [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_013341112.1
type III secretion system stator protein SctL
COORDINATES: protein motif:HMM:NF021051.2
COORDINATES: similar to AA sequence:RefSeq:WP_012372017.1
type III secretion inner membrane ring lipoprotein SctJ
COORDINATES: protein motif:HMM:NF021036.2
COORDINATES: protein motif:HMM:TIGR02561.1
COORDINATES: similar to AA sequence:RefSeq:WP_017775660.1
type III secretion system export apparatus subunit SctU
COORDINATES: similar to AA sequence:RefSeq:WP_007579484.1
GO:0009306 - protein secretion [Evidence IEA]
type III secretion system export apparatus subunit SctV
COORDINATES: protein motif:HMM:TIGR02557.2
COORDINATES: protein motif:HMM:TIGR02551.1
type III secretion system cytoplasmic ring protein SctQ
COORDINATES: similar to AA sequence:RefSeq:WP_004524345.1
type III secretion system export apparatus subunit SctR
COORDINATES: similar to AA sequence:RefSeq:WP_006047114.1
type III secretion system export apparatus subunit SctS
COORDINATES: similar to AA sequence:RefSeq:WP_012733098.1
COORDINATES: similar to AA sequence:RefSeq:WP_017775652.1
COORDINATES: similar to AA sequence:RefSeq:WP_009968769.1
CesT family type III secretion system chaperone
COORDINATES: similar to AA sequence:RefSeq:WP_010809854.1
COORDINATES: similar to AA sequence:RefSeq:WP_013089170.1
GO:0006378 - mRNA polyadenylation [Evidence IEA]; GO:0016070 - RNA metabolic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_006498885.1
GO:0016787 - hydrolase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_008646199.1
GO:0000334 - 3-hydroxyanthranilate 3,4-dioxygenase activity [Evidence IEA]; GO:0005506 - iron ion binding [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_006385972.1
2-aminomuconate 6-semialdehyde dehydrogenase (EC 1.2.1.32)
COORDINATES: similar to AA sequence:RefSeq:WP_011350333.1
GO:0016620 - oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor [Evidence IEA]
2-hydroxymuconic semialdehyde dehydrogenase
COORDINATES: similar to AA sequence:RefSeq:WP_020068632.1
Threonine 3-dehydrogenase (EC 1.1.1.103)
COORDINATES: similar to AA sequence:RefSeq:WP_004194543.1
GO:0008743 - L-threonine 3-dehydrogenase activity [Evidence IEA]
GO:0006567 - threonine catabolic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_007178651.1
GO:0008890 - glycine C-acetyltransferase activity [Evidence IEA]; GO:0030170 - pyridoxal phosphate binding [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_007178647.1
COORDINATES: similar to AA sequence:RefSeq:WP_018424020.1
COORDINATES: similar to AA sequence:RefSeq:WP_006480194.1
GO:0007059 - chromosome segregation [Evidence IEA]; GO:0000910 - cytokinesis [Evidence IEA]
ParB/RepB/Spo0J family partition protein
COORDINATES: similar to AA sequence:RefSeq:WP_014900706.1
COORDINATES: similar to AA sequence:RefSeq:WP_018444396.1
GO:0008794 - arsenate reductase (glutaredoxin) activity [Evidence IEA]
This arsenate reductase requires both glutathione and glutaredoxin to convert arsenate to arsenite, after which the efflux transporter formed by ArsA and ArsB can extrude the arsenite from the cell, providing resistance; Derived by automated computational analysis using gene prediction method: Protein Homology.
Mannose-6-phosphate isomerase (EC 5.3.1.8)
COORDINATES: similar to AA sequence:RefSeq:WP_012428695.1
5'-methylthioadenosine nucleosidase (EC 3.2.2.16) / S-adenosylhomocysteine nucleosidase (EC 3.2.2.9)
COORDINATES: similar to AA sequence:RefSeq:WP_020069495.1
GO:0008782 - adenosylhomocysteine nucleosidase activity [Evidence IEA]; GO:0008930 - methylthioadenosine nucleosidase activity [Evidence IEA]
GO:0019509 - L-methionine salvage from methylthioadenosine [Evidence IEA]; GO:0009164 - nucleoside catabolic process [Evidence IEA]; GO:0009116 - nucleoside metabolic process [Evidence IEA]
5'-methylthioadenosine/adenosylhomocysteine nucleosidase
COORDINATES: similar to AA sequence:RefSeq:WP_012415850.1
COORDINATES: similar to AA sequence:RefSeq:WP_007587501.1
COORDINATES: similar to AA sequence:RefSeq:WP_017234178.1
COORDINATES: similar to AA sequence:RefSeq:WP_017331175.1
COORDINATES: similar to AA sequence:RefSeq:WP_008006170.1
COORDINATES: similar to AA sequence:RefSeq:WP_017775411.1
COORDINATES: similar to AA sequence:RefSeq:WP_010089329.1
COORDINATES: similar to AA sequence:RefSeq:WP_006481696.1
COORDINATES: similar to AA sequence:RefSeq:WP_014896881.1
COORDINATES: similar to AA sequence:RefSeq:WP_007587867.1
GO:0003951 - NAD+ kinase activity [Evidence IEA]
GO:0006741 - NADP biosynthetic process [Evidence IEA]
Acetoin dehydrogenase E1 component alpha-subunit (EC 1.2.4.-)
COORDINATES: similar to AA sequence:RefSeq:WP_013094295.1
thiamine pyrophosphate-dependent dehydrogenase E1 component subunit alpha
COORDINATES: similar to AA sequence:RefSeq:WP_012364013.1
alpha-ketoacid dehydrogenase subunit beta
Dihydrolipoamide acetyltransferase component of acetoin dehydrogenase complex (EC 2.3.1.-)
COORDINATES: similar to AA sequence:RefSeq:WP_012328642.1
acetoin dehydrogenase dihydrolipoyllysine-residue acetyltransferase subunit
COORDINATES: similar to AA sequence:RefSeq:WP_011657038.1
GO:0051539 - 4 iron, 4 sulfur cluster binding [Evidence IEA]; GO:0016992 - lipoate synthase activity [Evidence IEA]; GO:1904047 - S-adenosyl-L-methionine binding [Evidence IEA]
GO:0009107 - lipoate biosynthetic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_013700267.1
PDDEXK nuclease domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_076612186.1
COORDINATES: similar to AA sequence:RefSeq:WP_007583527.1
COORDINATES: similar to AA sequence:RefSeq:WP_004528383.1
respiratory nitrate reductase subunit gamma
COORDINATES: similar to AA sequence:RefSeq:WP_012217829.1
COORDINATES: similar to AA sequence:RefSeq:WP_086558188.1
COORDINATES: similar to AA sequence:RefSeq:WP_007829664.1
COORDINATES: similar to AA sequence:RefSeq:WP_007829673.1
COORDINATES: similar to AA sequence:RefSeq:WP_012695822.1
COORDINATES: similar to AA sequence:RefSeq:WP_007853585.1
COORDINATES: similar to AA sequence:RefSeq:WP_019657773.1
COORDINATES: similar to AA sequence:RefSeq:WP_011485234.1
COORDINATES: similar to AA sequence:RefSeq:WP_019142367.1
COORDINATES: similar to AA sequence:RefSeq:WP_008918289.1
COORDINATES: similar to AA sequence:RefSeq:WP_013339404.1
AcvB/VirJ family lysyl-phosphatidylglycerol hydrolase
COORDINATES: similar to AA sequence:RefSeq:WP_007742903.1
bifunctional lysylphosphatidylglycerol flippase/synthetase MprF
COORDINATES: similar to AA sequence:RefSeq:WP_013429053.1
COORDINATES: similar to AA sequence:RefSeq:WP_009888491.1
COORDINATES: similar to AA sequence:RefSeq:WP_008353796.1
COORDINATES: similar to AA sequence:RefSeq:WP_012405830.1
COORDINATES: similar to AA sequence:RefSeq:WP_012492758.1
COORDINATES: similar to AA sequence:RefSeq:WP_004201153.1
pyridoxamine 5'-phosphate oxidase family protein