Lacticaseibacillus manihotivorans strain LM010 plasmid unnamed1.
type: Entry
definition: Lacticaseibacillus manihotivorans strain LM010 plasmid unnamed1.
sequence version: NZ_CP045069.1
sequence date: 2022-10-24
sequence: sequence
division: CON
label: NZ_CP045069.1
type: RefSeq
SIO_000068: refseq
dblink: PRJNA224116
dblink: SAMN12784792
keyword: RefSeq
source: Lacticaseibacillus manihotivorans
organism: Lacticaseibacillus manihotivorans
taxonomy: Bacteria; Bacillota; Bacilli; Lactobacillales; Lactobacillaceae; Lacticaseibacillus.
reference: 1
reference: 2
comment: REFSEQ INFORMATION: The reference sequence is identical to\nCP045069.1.\nAssembly not circularized.\nThe annotation was added by the NCBI Prokaryotic Genome Annotation\nPipeline (PGAP). Information about PGAP can be found here:\nhttps://www.ncbi.nlm.nih.gov/genome/annotation_prok/\n\n##Genome-Assembly-Data-START##\nAssembly Method :: PacBio SMRT Analysis v. v2.3\nGenome Representation :: Full\nExpected Final Version :: No\nGenome Coverage :: 241.12x\nSequencing Technology :: PacBio\n##Genome-Assembly-Data-END##\n\n##Genome-Annotation-Data-START##\nAnnotation Provider :: NCBI RefSeq\nAnnotation Date :: 10/24/2022 01:35:07\nAnnotation Pipeline :: NCBI Prokaryotic Genome\n Annotation Pipeline (PGAP)\nAnnotation Method :: Best-placed reference protein\n set; GeneMarkS-2+\nAnnotation Software revision :: 6.3\nFeatures Annotated :: Gene; CDS; rRNA; tRNA; ncRNA;\n repeat_region\nGenes (total) :: 3,452\nCDSs (total) :: 3,373\nGenes (coding) :: 3,251\nCDSs (with protein) :: 3,251\nGenes (RNA) :: 79\nrRNAs :: 5, 5, 5 (5S, 16S, 23S)\ncomplete rRNAs :: 5, 5, 5 (5S, 16S, 23S)\ntRNAs :: 61\nncRNAs :: 3\nPseudo Genes (total) :: 122\nCDSs (without protein) :: 122\nPseudo Genes (ambiguous residues) :: 0 of 122\nPseudo Genes (frameshifted) :: 38 of 122\nPseudo Genes (incomplete) :: 74 of 122\nPseudo Genes (internal stop) :: 14 of 122\nPseudo Genes (multiple problems) :: 4 of 122\n##Genome-Annotation-Data-END##

sequence
subclass of: SO_0000155
sequence length: 62782
topology: circular
so has quality: SO_0000988
location: 1..62782
location: region:1-62782:1
RO_0002162: 88233

NZ_CP045069
type: RefSeq
SIO_000068: refseq

PRJNA224116
type: BioProject
SIO_000068: bioproject

SAMN12784792
type: BioSample
SIO_000068: biosample

1
title: Genome sequencing of Lactobacillus manihotivorans
author: Kim, K.
journal: Unpublished

2
title: Direct Submission
author: Kim, K.
journal: Submitted (09-OCT-2019) College of Health Science, Korea University, Anam-ro 145, Seoul 02841, South Korea

position:1:1
position: 1
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:62782:1
position: 62782
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

feature:1-62782:1:source
so part of: sequence
organism: Lacticaseibacillus manihotivorans
mol type: genomic DNA
strain: LM010
isolation source: cassava sour starch fermentation
plasmid: unnamed1
collection date: 2000-02-29

88233
type: Taxonomy
SIO_000068: taxonomy

LM010_RS16615
type: Gene
subclass of: SO_0000704
RO_0002162: 88233
locus tag: LM010_RS16615
old locus tag: LM010_16615
so part of: sequence
location: 1..1368
location: region:1-1368:1
so has part: feature:1-1368:1:exon
subclass of: SO_0000010

position:1368:1
position: 1368
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1-1368:1:exon

LM010_RS16615
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 88233
locus tag: LM010_RS16615
old locus tag: LM010_16615
inference: COORDINATES: protein motif:HMM:NF025080.2
GO function: GO:0004803 - transposase activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: IS1380 family transposase
translation: MRLYAKVKSTKTITKARLHTISTLTSLSLQCNTNVTVTADGGQLSNDAGLVLFQEFLHRINFRQLANQCLKLPDQRRFWKASMIDIFLEKLLLDVAGYLHDSSANDWQRDPVLAATLGSSRLVSQPSLSRFFKRLEDADLDDFRKLIWQVAALAFRLSGQSRFVLDIDSTHCDTFGNQERSAFNAHYMAYGYHPQVVFDQESGLLLDALMRPGNEYTGKEADKFVETTFSRLSALPQSTSVIIRGDSGFATPKFYEMCDTHGVDFLVRLKANSKLGKLAETALVDCPPKYEESKCVYHEFKYQAASWGKARRVIVCSTHTADELVPWNHAFVVTILASEAPETLFKTYRQRGNAENQIKELKCGFGFDKTDSSTFARNTARALITGIAYNLVQLFKQLFVSEDRRSTVSSLRFSLFHIAGRITWHARRVVIHLASNYVYKNWFSRLMDEVHQLAT
SIO_010081: LM010_RS16615
subclass of: SO_0000673
so part of: LM010_RS16615
location: 1..1368
location: region:1-1368:1
so has part: feature:1-1368:1:exon

WP_152164907.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1-1368:1:exon

LM010_RS16620
type: Gene
subclass of: SO_0000704
RO_0002162: 88233
locus tag: LM010_RS16620
old locus tag: LM010_16620
pseudo: true
so part of: sequence
location: 1706..3120
location: region:1706-3120:1
so has part: feature:1706-3120:1:exon
subclass of: SO_0000010

position:1706:1
position: 1706
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3120:1
position: 3120
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1706-3120:1:exon

LM010_RS16620
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 88233
locus tag: LM010_RS16620
old locus tag: LM010_16620
inference: COORDINATES: similar to AA sequence:RefSeq:WP_015764803.1
GO function: GO:0004803 - transposase activity [Evidence IEA]
note: frameshifted; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: IS5 family transposase
SIO_010081: LM010_RS16620
subclass of: SO_0000673
so part of: LM010_RS16620
location: 1706..3120
location: region:1706-3120:1
so has part: feature:1706-3120:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1706-3120:1:exon

LM010_RS16625
type: Gene
subclass of: SO_0000704
RO_0002162: 88233
locus tag: LM010_RS16625
old locus tag: LM010_16625
so part of: sequence
location: 3179..4747
location: region:3179-4747:1
so has part: feature:3179-4747:1:exon
subclass of: SO_0000010

position:3179:1
position: 3179
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4747:1
position: 4747
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3179-4747:1:exon

LM010_RS16625
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 88233
locus tag: LM010_RS16625
old locus tag: LM010_16625
inference: COORDINATES: similar to AA sequence:RefSeq:WP_016526665.1
GO component: GO:0016020 - membrane [Evidence IEA]
GO function: GO:0005247 - voltage-gated chloride channel activity [Evidence IEA]
GO process: GO:0006821 - chloride transport [Evidence IEA]; GO:0055085 - transmembrane transport [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: ClC family H(+)/Cl(-) exchange transporter
translation: MIQLVKEKFDVTRLRFVLLGLLVGLMSGTVVSLFRYCIEIGLHYSRLVYRYLRIAPFVWWEWALLIGINLGLALIVARLLKREPYIAGSGIPQVEGQLAGELEMHWWSILWRKFIGGILALGPGLFLGREGPSIQLGASVGQGFASGFKLSGTDRRLLIASGAAAGLAAAFNAPIAGTLFVLEEIYHNFSPLVWLTALAGAIGSNFISLNVFGLVPVLHLSYSRSLPVSNYWHLILLGIVLGLFGYLYQRVLLVMPRWYHQLTHLPRPIQGIVPFLLVILVGYFSPNLLGGGNGLIVGFGQYVPPLFVLIAIFIIRFVFSMISYGSGLPGGIFLPILSLGAVIGAVYGVLMNQLGLLSHVYIMNLIIFSMAGYFAGIGKAPFTAILLVTEMVGNLAHLMPLAVISLTAYLVVDLLGGAPIYEALLKQMTMPKTVQQLHRPDHLEIPVFFGSPLNGKMVRDMPWPKEALLIGIRRGEQEVIPHGDTLIHEGDTLVLLTDTTQRPQVKQRIDALLATLEKKHQD
SIO_010081: LM010_RS16625
subclass of: SO_0000673
so part of: LM010_RS16625
location: 3179..4747
location: region:3179-4747:1
so has part: feature:3179-4747:1:exon

WP_152164908.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:3179-4747:1:exon

LM010_RS17480
type: Gene
subclass of: SO_0000704
RO_0002162: 88233
locus tag: LM010_RS17480
so part of: sequence
location: complement(5091..5153)
location: region:5091-5153:-1
so has part: feature:5091-5153:-1:exon
subclass of: SO_0000010

position:5091:-1
position: 5091
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5153:-1
position: 5153
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5091-5153:-1:exon

LM010_RS17480
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 88233
locus tag: LM010_RS17480
inference: COORDINATES: protein motif:HMM:NF028245.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: putative holin-like toxin
translation: MLLFGTFLIALLSYIDKHLK
SIO_010081: LM010_RS17480
subclass of: SO_0000673
so part of: LM010_RS17480
location: complement(5091..5153)
location: region:5091-5153:-1
so has part: feature:5091-5153:-1:exon

WP_225436282.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:5091-5153:-1:exon

LM010_RS17605
type: Gene
subclass of: SO_0000704
RO_0002162: 88233
locus tag: LM010_RS17605
old locus tag: LM010_16635
so part of: sequence
location: complement(5558..6436)
location: region:5558-6436:-1
so has part: feature:5558-6436:-1:exon
subclass of: SO_0000010

position:5558:-1
position: 5558
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6436:-1
position: 6436
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5558-6436:-1:exon

LM010_RS17605
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 88233
locus tag: LM010_RS17605
old locus tag: LM010_16635
inference: COORDINATES: protein motif:HMM:NF025080.2
GO function: GO:0004803 - transposase activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: IS1380 family transposase
translation: MLDIDSTHCDTFGNQERSAFNAHYMAYGYHPQVVFDQESGLLLDALMRPGNEYTGKEADKFVETTFSRLSALPQSTSVIIRGDSGFAAPKFYEMCDTHGVDFLVRLKANSKLGKLAETALVDCPPKYEESRCVYHEFKYQAASWGKARRVIVCSTHTADELVPWNHAFVVTSLASEAPETLFKTYRQRGNAENQIKELKCGFGFDKTDSSTFARNTARALITGIAYNLVQLFKQLFVSEDRRSTISSLRFSLFHIAGRITWHARRVVIHLASNYVYKNWFSRLMDEVHQLAT
SIO_010081: LM010_RS17605
subclass of: SO_0000673
so part of: LM010_RS17605
location: complement(5558..6436)
location: region:5558-6436:-1
so has part: feature:5558-6436:-1:exon

WP_191991463.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:5558-6436:-1:exon

LM010_RS17610
type: Gene
subclass of: SO_0000704
RO_0002162: 88233
locus tag: LM010_RS17610
old locus tag: LM010_16640
so part of: sequence
location: complement(6424..6924)
location: region:6424-6924:-1
so has part: feature:6424-6924:-1:exon
subclass of: SO_0000010

position:6424:-1
position: 6424
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6924:-1
position: 6924
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6424-6924:-1:exon

LM010_RS17610
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 88233
locus tag: LM010_RS17610
old locus tag: LM010_16640
inference: COORDINATES: protein motif:HMM:NF025080.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: transposase
translation: MRLYAKAESTKTITKARLHTISTLTSLSLQCNTNVTVTADGGQLSNDAGLVLFQEFLHRINFRQLANQCLKLPDQRRFWKASMIDIFLEKLLLDVAGYLHDSSANDWQRDPVLAATLGSSRLVSQPSLSRFFKRLEDADLDDFRKLIWQVAALAFRLSGQSASCWI
SIO_010081: LM010_RS17610
subclass of: SO_0000673
so part of: LM010_RS17610
location: complement(6424..6924)
location: region:6424-6924:-1
so has part: feature:6424-6924:-1:exon

WP_263862610.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:6424-6924:-1:exon

LM010_RS17615
type: Gene
subclass of: SO_0000704
RO_0002162: 88233
locus tag: LM010_RS17615
so part of: sequence
location: complement(7111..7239)
location: region:7111-7239:-1
so has part: feature:7111-7239:-1:exon
subclass of: SO_0000010

position:7111:-1
position: 7111
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7239:-1
position: 7239
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7111-7239:-1:exon

LM010_RS17615
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 88233
locus tag: LM010_RS17615
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MHSSSLDNFLAEQLKDPVFSQFYLEAMPELDNSMVDFKDPID
SIO_010081: LM010_RS17615
subclass of: SO_0000673
so part of: LM010_RS17615
location: complement(7111..7239)
location: region:7111-7239:-1
so has part: feature:7111-7239:-1:exon

WP_263862594.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:7111-7239:-1:exon

LM010_RS16645
type: Gene
subclass of: SO_0000704
RO_0002162: 88233
locus tag: LM010_RS16645
old locus tag: LM010_16645
so part of: sequence
location: complement(7535..7624)
location: region:7535-7624:-1
so has part: feature:7535-7624:-1:exon
subclass of: SO_0000010

position:7535:-1
position: 7535
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7624:-1
position: 7624
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7535-7624:-1:exon

LM010_RS16645
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 88233
locus tag: LM010_RS16645
old locus tag: LM010_16645
inference: COORDINATES: protein motif:HMM:NF033608.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: type I toxin-antitoxin system Fst family toxin
translation: MSSFLSEVIAPIVVGIVIATYADWLDRHR
SIO_010081: LM010_RS16645
subclass of: SO_0000673
so part of: LM010_RS16645
location: complement(7535..7624)
location: region:7535-7624:-1
so has part: feature:7535-7624:-1:exon

WP_152164671.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:7535-7624:-1:exon

LM010_RS16650
type: Gene
subclass of: SO_0000704
RO_0002162: 88233
locus tag: LM010_RS16650
old locus tag: LM010_16650
so part of: sequence
location: complement(7914..8273)
location: region:7914-8273:-1
so has part: feature:7914-8273:-1:exon
subclass of: SO_0000010

position:7914:-1
position: 7914
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:8273:-1
position: 8273
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7914-8273:-1:exon

LM010_RS16650
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 88233
locus tag: LM010_RS16650
old locus tag: LM010_16650
EC number: 3.1.-.-
inference: COORDINATES: similar to AA sequence:RefSeq:WP_017260901.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: type II toxin-antitoxin system PemK/MazF family toxin
translation: MQMPKQGDIIFIDSEPHAGKEFGGHDPEQNNTRRPMIVLSNTDYNHGTKMVIGMLVTHSNFGDSSWYEQFADFNSGVEGNIVLWQLPTYDALARRAEIVGHVPDKLLKRLKQDAKDIFE
SIO_010081: LM010_RS16650
subclass of: SO_0000673
so part of: LM010_RS16650
location: complement(7914..8273)
location: region:7914-8273:-1
so has part: feature:7914-8273:-1:exon

WP_056962255.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:7914-8273:-1:exon

LM010_RS16655
type: Gene
subclass of: SO_0000704
RO_0002162: 88233
locus tag: LM010_RS16655
old locus tag: LM010_16655
so part of: sequence
location: complement(8276..8548)
location: region:8276-8548:-1
so has part: feature:8276-8548:-1:exon
subclass of: SO_0000010

position:8276:-1
position: 8276
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:8548:-1
position: 8548
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:8276-8548:-1:exon

LM010_RS16655
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 88233
locus tag: LM010_RS16655
old locus tag: LM010_16655
inference: COORDINATES: similar to AA sequence:RefSeq:WP_013245344.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: AbrB/MazE/SpoVT family DNA-binding domain-containing protein
translation: MAEKVEKQGKIIGRFVARKSGNSLSLTIPAEVGVEAGKEFVLVAQDDGSLLYEPQHVNPWHTKAAKDYDFRGDLDKMGNVFEEPRMGREL
SIO_010081: LM010_RS16655
subclass of: SO_0000673
so part of: LM010_RS16655
location: complement(8276..8548)
location: region:8276-8548:-1
so has part: feature:8276-8548:-1:exon

WP_054719872.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:8276-8548:-1:exon

LM010_RS16660
type: Gene
subclass of: SO_0000704
RO_0002162: 88233
locus tag: LM010_RS16660
old locus tag: LM010_16660
so part of: sequence
location: 8931..9392
location: region:8931-9392:1
so has part: feature:8931-9392:1:exon
subclass of: SO_0000010

position:8931:1
position: 8931
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:9392:1
position: 9392
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:8931-9392:1:exon

LM010_RS16660
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 88233
locus tag: LM010_RS16660
old locus tag: LM010_16660
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MSGHITQRELGVEAGFKNAEGLFLNFIQEEVSPQKVAEAIVQLGLKQEMLLDVDPKLFELAEKLKNTKNKRKPSYIIAQHEPYSDGRRGYFLGLTDAIMIHFNSGDLKTMKSLVDESGVLRRELIHAGVDPEDIDDIDDVMNEIPDAIYWGQD
SIO_010081: LM010_RS16660
subclass of: SO_0000673
so part of: LM010_RS16660
location: 8931..9392
location: region:8931-9392:1
so has part: feature:8931-9392:1:exon

WP_054719868.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:8931-9392:1:exon

LM010_RS16665
type: Gene
subclass of: SO_0000704
RO_0002162: 88233
locus tag: LM010_RS16665
old locus tag: LM010_16665
so part of: sequence
location: 9392..9994
location: region:9392-9994:1
so has part: feature:9392-9994:1:exon
subclass of: SO_0000010

position:9994:1
position: 9994
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:9392-9994:1:exon

LM010_RS16665
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 88233
locus tag: LM010_RS16665
old locus tag: LM010_16665
inference: COORDINATES: similar to AA sequence:RefSeq:WP_016622858.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: site-specific integrase
translation: MEFVEPIRSKKKIEAMKIMLASGREGDRNLLLFTLGINTAYRISDLGKLKLENVLEVSGNGHVVAKDRLALREQKTGKHNSVILGDKLRKMIIDYCREHFPEALDQRDFDGYLFPSARDRSKPLSRQSIWRIISTAGNQVGLDHIGTHTMRKTFGYWLYKSNVSVEIIQQLLNHSNAQTTLRYIGITQDDKDNAVQSLNL
SIO_010081: LM010_RS16665
subclass of: SO_0000673
so part of: LM010_RS16665
location: 9392..9994
location: region:9392-9994:1
so has part: feature:9392-9994:1:exon

WP_056962256.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:9392-9994:1:exon

LM010_RS16670
type: Gene
subclass of: SO_0000704
RO_0002162: 88233
locus tag: LM010_RS16670
old locus tag: LM010_16670
pseudo: true
so part of: sequence
location: complement(10200..11246)
location: region:10200-11246:-1
so has part: feature:10200-11246:-1:exon
subclass of: SO_0000010

position:10200:-1
position: 10200
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:11246:-1
position: 11246
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:10200-11246:-1:exon

LM010_RS16670
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 88233
locus tag: LM010_RS16670
old locus tag: LM010_16670
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012695418.1
GO function: GO:0004803 - transposase activity [Evidence IEA]
note: internal stop; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: IS30 family transposase
SIO_010081: LM010_RS16670
subclass of: SO_0000673
so part of: LM010_RS16670
location: complement(10200..11246)
location: region:10200-11246:-1
so has part: feature:10200-11246:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:10200-11246:-1:exon

LM010_RS16675
type: Gene
subclass of: SO_0000704
RO_0002162: 88233
gene: mprF
locus tag: LM010_RS16675
old locus tag: LM010_16675
pseudo: true
so part of: sequence
location: complement(11455..14058)
location: region:11455-14058:-1
so has part: feature:11455-14058:-1:exon
subclass of: SO_0000010

position:11455:-1
position: 11455
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:14058:-1
position: 14058
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:11455-14058:-1:exon

LM010_RS16675
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 88233
gene: mprF
locus tag: LM010_RS16675
old locus tag: LM010_16675
inference: COORDINATES: similar to AA sequence:RefSeq:WP_016526948.1
note: frameshifted; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: bifunctional lysylphosphatidylglycerol flippase/synthetase MprF
SIO_010081: LM010_RS16675
subclass of: SO_0000673
so part of: LM010_RS16675
location: complement(11455..14058)
location: region:11455-14058:-1
so has part: feature:11455-14058:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:11455-14058:-1:exon

LM010_RS16685
type: Gene
subclass of: SO_0000704
RO_0002162: 88233
locus tag: LM010_RS16685
old locus tag: LM010_16685
pseudo: true
so part of: sequence
location: 14224..>14334
location: region:14224-14334:1
so has part: feature:14224-14334:1:exon
subclass of: SO_0000010

position:14224:1
position: 14224
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:14334:1
position: 14334
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition

urn:…
SIO_000300: 1
SIO_000628: feature:14224-14334:1:exon

LM010_RS16685
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 88233
locus tag: LM010_RS16685
old locus tag: LM010_16685
inference: COORDINATES: similar to AA sequence:RefSeq:WP_053338758.1
note: incomplete; partial in the middle of a contig; missing C-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: IS30 family transposase
SIO_010081: LM010_RS16685
subclass of: SO_0000673
so part of: LM010_RS16685
location: 14224..>14334
location: region:14224-14334:1
so has part: feature:14224-14334:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:14224-14334:1:exon

LM010_RS16690
type: Gene
subclass of: SO_0000704
RO_0002162: 88233
locus tag: LM010_RS16690
old locus tag: LM010_16690
so part of: sequence
location: complement(14464..15831)
location: region:14464-15831:-1
so has part: feature:14464-15831:-1:exon
subclass of: SO_0000010

position:14464:-1
position: 14464
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:15831:-1
position: 15831
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:14464-15831:-1:exon

LM010_RS16690
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 88233
locus tag: LM010_RS16690
old locus tag: LM010_16690
inference: COORDINATES: protein motif:HMM:NF025080.2
GO function: GO:0004803 - transposase activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: IS1380 family transposase
translation: MRLYAKVESTKTITKARLHTISTLTSLSLQCNTNVTVTADGGQLSNDAGLVLFQEFLHRINFRQLANQCLKLPDQRRFWKASMIDIFLEKLLLDVAGYLHDSSANDWQRDPVLAATLGSSRLVSQPSLSRFFKRLEDADLDDFRKLIWQVAALAFRLSGQSRFVLDIDSTHCDTFGNQERSAFNAHYMAYGYHPQVVFDQESGLLLDALMRPGNEYTGKEADKFVETTFSRLSALPQSTSVIIRGDSGFAAPKFYEMCDTHGVDFLVRLKANSKLGKLAETALVDCPPKYEESKCVYHEFKYQAASWGKARRVIVCSTHTADELVPWNHAFVVTSLASEAPETLFKTYRQRGNAENQIKELKCGFGFDKTDSSTFARNTARALITGIAYNLVQLFKQLFVSEDRRSTISSLRFSLFHIAGRITWHARRVVIHLASNYVYKNWFSRLMDEVHQLAT
SIO_010081: LM010_RS16690
subclass of: SO_0000673
so part of: LM010_RS16690
location: complement(14464..15831)
location: region:14464-15831:-1
so has part: feature:14464-15831:-1:exon

WP_021730603.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:14464-15831:-1:exon

LM010_RS16695
type: Gene
subclass of: SO_0000704
RO_0002162: 88233
locus tag: LM010_RS16695
old locus tag: LM010_16695
pseudo: true
so part of: sequence
location: <15917..>16084
location: region:15917-16084:1
so has part: feature:15917-16084:1:exon
subclass of: SO_0000010

position:15917:1
position: 15917
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition

position:16084:1
position: 16084
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition

urn:…
SIO_000300: 1
SIO_000628: feature:15917-16084:1:exon

LM010_RS16695
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 88233
locus tag: LM010_RS16695
old locus tag: LM010_16695
inference: COORDINATES: similar to AA sequence:RefSeq:WP_053338758.1
note: incomplete; partial in the middle of a contig; missing N-terminus and C-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: IS30 family transposase
SIO_010081: LM010_RS16695
subclass of: SO_0000673
so part of: LM010_RS16695
location: <15917..>16084
location: region:15917-16084:1
so has part: feature:15917-16084:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:15917-16084:1:exon

LM010_RS16700
type: Gene
subclass of: SO_0000704
RO_0002162: 88233
locus tag: LM010_RS16700
old locus tag: LM010_16700
so part of: sequence
location: complement(16171..17223)
location: region:16171-17223:-1
so has part: feature:16171-17223:-1:exon
subclass of: SO_0000010

position:16171:-1
position: 16171
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:17223:-1
position: 17223
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:16171-17223:-1:exon

LM010_RS16700
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 88233
locus tag: LM010_RS16700
old locus tag: LM010_16700
inference: COORDINATES: similar to AA sequence:RefSeq:WP_016384005.1
GO function: GO:0004803 - transposase activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: IS30 family transposase
translation: MQKQDTTHRQKGQHLTSLERGKVAGFRQAGKSNRWIAAEIGVCPQTINNEIKRGTVDQVKKSNGKRVYHRQYLPEAAQARYETARLSCHRPDKFASVQVFLAWYVQRAKQDKWSPDASIGYAKRHKLFTPEELVCASTLYQYIDDQRLEIRNIDLLEKTKRKTSHQHHTKAKRLAGRSIEERPKVVERRRQFGHWEMDTIVGKRNGKESVILTLIERKTRCQLLRLIEGRDADSVSYALRGIKREWGACIKTITADNGPEFTALNTAFAETETEIFYAHPYTSCDRGTNEAHNRMIRQDFPKGMSLDDISPSQVQATQDRLNQLPRKQQGYCTPQQNFEAEARRVRRMAQ
SIO_010081: LM010_RS16700
subclass of: SO_0000673
so part of: LM010_RS16700
location: complement(16171..17223)
location: region:16171-17223:-1
so has part: feature:16171-17223:-1:exon

WP_152164912.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:16171-17223:-1:exon

LM010_RS16705
type: Gene
subclass of: SO_0000704
RO_0002162: 88233
locus tag: LM010_RS16705
old locus tag: LM010_16705
pseudo: true
so part of: sequence
location: <17347..18054
location: region:17347-18054:1
so has part: feature:17347-18054:1:exon
subclass of: SO_0000010

position:17347:1
position: 17347
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition

position:18054:1
position: 18054
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:17347-18054:1:exon

LM010_RS16705
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 88233
locus tag: LM010_RS16705
old locus tag: LM010_16705
inference: COORDINATES: similar to AA sequence:RefSeq:WP_053338758.1
GO function: GO:0004803 - transposase activity [Evidence IEA]
note: incomplete; partial in the middle of a contig; missing N-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: IS30-like element ISLpl1 family transposase
SIO_010081: LM010_RS16705
subclass of: SO_0000673
so part of: LM010_RS16705
location: <17347..18054
location: region:17347-18054:1
so has part: feature:17347-18054:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:17347-18054:1:exon

LM010_RS16710
type: Gene
subclass of: SO_0000704
RO_0002162: 88233
locus tag: LM010_RS16710
old locus tag: LM010_16710
pseudo: true
so part of: sequence
location: <18104..18334
location: region:18104-18334:1
so has part: feature:18104-18334:1:exon
subclass of: SO_0000010

position:18104:1
position: 18104
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition

position:18334:1
position: 18334
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:18104-18334:1:exon

LM010_RS16710
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 88233
locus tag: LM010_RS16710
old locus tag: LM010_16710
inference: COORDINATES: similar to AA sequence:RefSeq:WP_003600575.1
note: incomplete; partial in the middle of a contig; missing N-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: cupin domain-containing protein
SIO_010081: LM010_RS16710
subclass of: SO_0000673
so part of: LM010_RS16710
location: <18104..18334
location: region:18104-18334:1
so has part: feature:18104-18334:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:18104-18334:1:exon

LM010_RS16715
type: Gene
subclass of: SO_0000704
RO_0002162: 88233
locus tag: LM010_RS16715
old locus tag: LM010_16715
so part of: sequence
location: complement(18407..19423)
location: region:18407-19423:-1
so has part: feature:18407-19423:-1:exon
subclass of: SO_0000010

position:18407:-1
position: 18407
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:19423:-1
position: 19423
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:18407-19423:-1:exon

LM010_RS16715
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 88233
locus tag: LM010_RS16715
old locus tag: LM010_16715
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011674571.1
GO function: GO:0004803 - transposase activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: IS30 family transposase
translation: MTHSQISTHKHYQQLSLSDRATIQALRSAGKTMTDIALVLHCNKSTISREITRGAVAQLDSKHHSHQVYLAETAQTLHAQKRDRTGHHVFLKTSRTFFKALTKELTRKPRVHSVDSFVHFYCDQGKSCPSTTTVYRYIDAGLLNLDNMALPKKLRRRVKAYKNAHKRKNKKIYGDSIELRPAAVNDRTGVGHWEGDLVKGIRSADEPALMTLTERYSRTEIIVKIPDYHAGTCLKALQDTIDDYGVKEFESITFDNGSEFAKLSEIVGTQIYFAHPYSPWERGTNENTNGLLREYFPKGRSLRDVTLVEIQAVQSALNHRPRRILNYLRPCDYYRRMA
SIO_010081: LM010_RS16715
subclass of: SO_0000673
so part of: LM010_RS16715
location: complement(18407..19423)
location: region:18407-19423:-1
so has part: feature:18407-19423:-1:exon

WP_152164913.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:18407-19423:-1:exon

LM010_RS16720
type: Gene
subclass of: SO_0000704
RO_0002162: 88233
locus tag: LM010_RS16720
old locus tag: LM010_16720
pseudo: true
so part of: sequence
location: 19571..20262
location: region:19571-20262:1
so has part: feature:19571-20262:1:exon
subclass of: SO_0000010

position:19571:1
position: 19571
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:20262:1
position: 20262
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:19571-20262:1:exon

LM010_RS16720
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 88233
locus tag: LM010_RS16720
old locus tag: LM010_16720
inference: COORDINATES: similar to AA sequence:RefSeq:WP_014940376.1
note: frameshifted; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: response regulator transcription factor
SIO_010081: LM010_RS16720
subclass of: SO_0000673
so part of: LM010_RS16720
location: 19571..20262
location: region:19571-20262:1
so has part: feature:19571-20262:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:19571-20262:1:exon

LM010_RS16725
type: Gene
subclass of: SO_0000704
RO_0002162: 88233
locus tag: LM010_RS16725
old locus tag: LM010_16725
so part of: sequence
location: 20255..21628
location: region:20255-21628:1
so has part: feature:20255-21628:1:exon
subclass of: SO_0000010

position:20255:1
position: 20255
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:21628:1
position: 21628
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:20255-21628:1:exon

LM010_RS16725
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 88233
locus tag: LM010_RS16725
old locus tag: LM010_16725
inference: COORDINATES: similar to AA sequence:RefSeq:WP_004562534.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: HAMP domain-containing sensor histidine kinase
translation: MPKNTESSASRISRAYAWLLTVLMLAVGLVTISVVGAHLIHNKKDDASQLMTTLQKSFADDKPDWDYWHDTANVNMHTSFVRVIVRPHTKPTRYYYTKHTKAFLKDDWDTWALWSHIQYQQKQGIYYHLAETEHYGKTKVTYELWLSLNNMIELFKLTLLVIVVMSIIGLLLGIWLIHIFAKRLNQPLVDLTTAAETIVEAKDATYHETLPVPAGPAEVKALGIEFNRLLTSLNQQVIRDHQFVSDASHELRTPLAAIRGHAGLIRRHAKDHPEIVQESLATIESSSLAMQELIERLLSLSRMDHAHLAGDWFDLTKLAQRVANSYPIGDHKPLQVIGTETVLAYAHRDSIEQVVVALLNNAEKYGEDSHITLEVARTHDRALLSVSDLGPGVADVDKAKVFDRFYRVDASREKQIGGTGLGLAIAKRLIDLNHGELEVIDNHPTGAKFVISLPTKG
SIO_010081: LM010_RS16725
subclass of: SO_0000673
so part of: LM010_RS16725
location: 20255..21628
location: region:20255-21628:1
so has part: feature:20255-21628:1:exon

WP_152164914.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:20255-21628:1:exon

LM010_RS16730
type: Gene
subclass of: SO_0000704
RO_0002162: 88233
locus tag: LM010_RS16730
old locus tag: LM010_16730
so part of: sequence
location: 21856..22695
location: region:21856-22695:1
so has part: feature:21856-22695:1:exon
subclass of: SO_0000010

position:21856:1
position: 21856
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:22695:1
position: 22695
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:21856-22695:1:exon

LM010_RS16730
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 88233
locus tag: LM010_RS16730
old locus tag: LM010_16730
inference: COORDINATES: protein motif:HMM:NF025080.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: transposase
translation: MRLYAKVESTKTITKARLHTISTLTSLSLQCNTNVTVTADGGQLSNDAGLVLFQEFLHRINFRQLANQCLKLPDQRRFWKASMIDIFLEKLLLDVAGYLHDSSVNDWQRDPVLAATLGSSRLVSQPSLSRFFKRLEDADLDDFRKLIWQVAALAFRLSGQSRFVLDIDSTHCDTFGNQERSAFNAHYMAYGYHPQVVFDQESGLLLDTLMRPGNEYTGKDSSRQLFRAYRRSLKAPASSFEAIRGLLRQNFTRCATHMASTFWFDSRQIQSLGSWQKRP
SIO_010081: LM010_RS16730
subclass of: SO_0000673
so part of: LM010_RS16730
location: 21856..22695
location: region:21856-22695:1
so has part: feature:21856-22695:1:exon

WP_263862611.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:21856-22695:1:exon

LM010_RS16740
type: Gene
subclass of: SO_0000704
RO_0002162: 88233
locus tag: LM010_RS16740
old locus tag: LM010_16740
pseudo: true
so part of: sequence
location: complement(22792..>23034)
location: region:22792-23034:-1
so has part: feature:22792-23034:-1:exon
subclass of: SO_0000010

position:22792:-1
position: 22792
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:23034:-1
position: 23034
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition

urn:…
SIO_000300: 1
SIO_000628: feature:22792-23034:-1:exon

LM010_RS16740
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 88233
locus tag: LM010_RS16740
old locus tag: LM010_16740
inference: COORDINATES: protein motif:HMM:NF025063.2
GO process: GO:0015074 - DNA integration [Evidence IEA]
note: incomplete; partial in the middle of a contig; missing N-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: IS3 family transposase
SIO_010081: LM010_RS16740
subclass of: SO_0000673
so part of: LM010_RS16740
location: complement(22792..>23034)
location: region:22792-23034:-1
so has part: feature:22792-23034:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:22792-23034:-1:exon

LM010_RS16745
type: Gene
subclass of: SO_0000704
RO_0002162: 88233
locus tag: LM010_RS16745
old locus tag: LM010_16745
so part of: sequence
location: complement(23179..24408)
location: region:23179-24408:-1
so has part: feature:23179-24408:-1:exon
subclass of: SO_0000010

position:23179:-1
position: 23179
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:24408:-1
position: 24408
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:23179-24408:-1:exon

LM010_RS16745
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 88233
locus tag: LM010_RS16745
old locus tag: LM010_16745
inference: COORDINATES: similar to AA sequence:RefSeq:WP_016205480.1
GO function: GO:0004803 - transposase activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: IS110 family transposase
translation: MVLQVIYPNCCGIDVHKTFVFACIAITDNKGIPSYYRKRFSTFTHGLRDLAEWLEYYSCFDVCMESTGKYWIPVWNVLETAGIHQTLAHPKYVRAIRGKKTDKKDAKWIADLFRHDLVVGSFMPPALIRQLRDLIRYRWKLGNNMVSEKNRFQNSLTVSNIQLASVVSDTFGVSAQKIIKSILDKKLGDTEQLEDLIHGSLKKKLPELELAVDGAITSDQEAKLRVIMDHYKSLVLARTTIETEVEMRAQPLAQEIALVRTVPGLDKPFTAISVLAETGVDMSQFPDAKHLCSWAGLTPTNNESAGKKHSVRISKAGAYLKPLLVQVANGLIKSDKYPEIKQRYQILKKRRGHKKTIIAIARQLLTAVYHILANHEVYNPKQFVDRPERSMSVREAVEFAKARGFDVLA
SIO_010081: LM010_RS16745
subclass of: SO_0000673
so part of: LM010_RS16745
location: complement(23179..24408)
location: region:23179-24408:-1
so has part: feature:23179-24408:-1:exon

WP_152164633.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:23179-24408:-1:exon

LM010_RS16750
type: Gene
subclass of: SO_0000704
RO_0002162: 88233
locus tag: LM010_RS16750
old locus tag: LM010_16750
so part of: sequence
location: 24710..25261
location: region:24710-25261:1
so has part: feature:24710-25261:1:exon
subclass of: SO_0000010

position:24710:1
position: 24710
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:25261:1
position: 25261
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:24710-25261:1:exon

LM010_RS16750
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 88233
locus tag: LM010_RS16750
old locus tag: LM010_16750
inference: COORDINATES: protein motif:HMM:NF024980.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: winged helix-turn-helix domain-containing protein
translation: MSNRFKFTAEQVAELEDAYRTYTDDGKAHRRIQVVMLRAQGTRVKAVTAATKACSSTITDFTNRYLEEGIPGLLKTKHKGNYRFLTKEETLEFLAKFEEDAAAGKLITTNEMFEAYQERIGHTANRNAFISMLHRFGWRKVKPRPHHPKQVDAETIEASKKLTTKSKNQENGYCMTWIHETSL
SIO_010081: LM010_RS16750
subclass of: SO_0000673
so part of: LM010_RS16750
location: 24710..25261
location: region:24710-25261:1
so has part: feature:24710-25261:1:exon

WP_152164916.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:24710-25261:1:exon

LM010_RS16755
type: Gene
subclass of: SO_0000704
RO_0002162: 88233
locus tag: LM010_RS16755
old locus tag: LM010_16755
so part of: sequence
location: 25261..25773
location: region:25261-25773:1
so has part: feature:25261-25773:1:exon
subclass of: SO_0000010

position:25773:1
position: 25773
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:25261-25773:1:exon

LM010_RS16755
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 88233
locus tag: LM010_RS16755
old locus tag: LM010_16755
inference: COORDINATES: protein motif:HMM:NF033545.0
GO function: GO:0004803 - transposase activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: IS630 family transposase
translation: MFEDEAGFGRIFRPASCWARLGVRPNVAAHHIREMRYAFGAVAPQTGDSFFLALPYCTVTCMNLFLQQLSDQYPDKMIILICDNAVWHKARALFIPANIEMLYIPPYTPEMNPIERIWREFRRRGFVNRVFQTLEKVVDRLCEVIQGLTRSDVKSITHAAWLIEPDLTMS
SIO_010081: LM010_RS16755
subclass of: SO_0000673
so part of: LM010_RS16755
location: 25261..25773
location: region:25261-25773:1
so has part: feature:25261-25773:1:exon

WP_054720017.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:25261-25773:1:exon

LM010_RS16760
type: Gene
subclass of: SO_0000704
RO_0002162: 88233
locus tag: LM010_RS16760
old locus tag: LM010_16760
so part of: sequence
location: complement(25763..26422)
location: region:25763-26422:-1
so has part: feature:25763-26422:-1:exon
subclass of: SO_0000010

position:25763:-1
position: 25763
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:26422:-1
position: 26422
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:25763-26422:-1:exon

LM010_RS16760
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 88233
locus tag: LM010_RS16760
old locus tag: LM010_16760
inference: COORDINATES: protein motif:HMM:NF033516.0
GO function: GO:0004803 - transposase activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: IS3 family transposase
translation: MTNRDLYAFIETHDFPIVTATDALSVPRGSYYRYCNHEETPTEKRREEIRAQLHVAYRAAKGRYGAPKLTFMVNQQRTDRVGQKLIQKLMHEDGLRSITRHKYRAASAANPVVERDNLLAQDFSTTNINQKWAGDITYVKTTKDGWTYLCTFMDLFSRRIVGFAYGRDMTETLVIKAFSYALMDRNVYEGLTVHTDLGSQFTGAAFEEILVSVGANTSS
SIO_010081: LM010_RS16760
subclass of: SO_0000673
so part of: LM010_RS16760
location: complement(25763..26422)
location: region:25763-26422:-1
so has part: feature:25763-26422:-1:exon

WP_152164918.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:25763-26422:-1:exon

LM010_RS16765
type: Gene
subclass of: SO_0000704
RO_0002162: 88233
locus tag: LM010_RS16765
old locus tag: LM010_16765
so part of: sequence
location: complement(26419..26679)
location: region:26419-26679:-1
so has part: feature:26419-26679:-1:exon
subclass of: SO_0000010

position:26419:-1
position: 26419
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:26679:-1
position: 26679
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:26419-26679:-1:exon

LM010_RS16765
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 88233
locus tag: LM010_RS16765
old locus tag: LM010_16765
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MAKKYNQDFKDMLIELHAAGKGPGELSKDYEVPIATLGKWFTEHKQATTKDPTSAEFAKMRAEYLQMKQENEILKKALGIFAKQNK
SIO_010081: LM010_RS16765
subclass of: SO_0000673
so part of: LM010_RS16765
location: complement(26419..26679)
location: region:26419-26679:-1
so has part: feature:26419-26679:-1:exon

WP_054720011.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:26419-26679:-1:exon

LM010_RS16770
type: Gene
subclass of: SO_0000704
RO_0002162: 88233
locus tag: LM010_RS16770
old locus tag: LM010_16770
so part of: sequence
location: 26738..27238
location: region:26738-27238:1
so has part: feature:26738-27238:1:exon
subclass of: SO_0000010

position:26738:1
position: 26738
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:27238:1
position: 27238
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:26738-27238:1:exon

LM010_RS16770
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 88233
locus tag: LM010_RS16770
old locus tag: LM010_16770
inference: COORDINATES: protein motif:HMM:NF025080.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: transposase
translation: MRVTPCVYHEFKYQAASWGKARRVIVCSTHTADELVPWNHAFVVTSLASEAPETLFKTYRQRGNAENQIKELKCGFGFDKTDSSTFARNTARALITGIAYNLVQLFKQLFVSEDRRSTISSLRFSLFHIAGRITWHARRVMIHLASNYVYKNWFSRLMDEVHQLAT
SIO_010081: LM010_RS16770
subclass of: SO_0000673
so part of: LM010_RS16770
location: 26738..27238
location: region:26738-27238:1
so has part: feature:26738-27238:1:exon

WP_152164919.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:26738-27238:1:exon

LM010_RS16775
type: Gene
subclass of: SO_0000704
RO_0002162: 88233
locus tag: LM010_RS16775
old locus tag: LM010_16775
pseudo: true
so part of: sequence
location: complement(27541..>27957)
location: region:27541-27957:-1
so has part: feature:27541-27957:-1:exon
subclass of: SO_0000010

position:27541:-1
position: 27541
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:27957:-1
position: 27957
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition

urn:…
SIO_000300: 1
SIO_000628: feature:27541-27957:-1:exon

LM010_RS16775
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 88233
locus tag: LM010_RS16775
old locus tag: LM010_16775
inference: COORDINATES: similar to AA sequence:RefSeq:WP_003679899.1
note: incomplete; partial in the middle of a contig; missing N-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: DDE-type integrase/transposase/recombinase
SIO_010081: LM010_RS16775
subclass of: SO_0000673
so part of: LM010_RS16775
location: complement(27541..>27957)
location: region:27541-27957:-1
so has part: feature:27541-27957:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:27541-27957:-1:exon

LM010_RS16780
type: Gene
subclass of: SO_0000704
RO_0002162: 88233
locus tag: LM010_RS16780
old locus tag: LM010_16780
so part of: sequence
location: complement(28147..29592)
location: region:28147-29592:-1
so has part: feature:28147-29592:-1:exon
subclass of: SO_0000010

position:28147:-1
position: 28147
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:29592:-1
position: 29592
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:28147-29592:-1:exon

LM010_RS16780
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 88233
locus tag: LM010_RS16780
old locus tag: LM010_16780
inference: COORDINATES: similar to AA sequence:RefSeq:WP_010012865.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DDE-type integrase/transposase/recombinase
translation: MHTPLISYLVLVIKLQRQIILVLLAQLAEIFDHSRLPRADKPVFKRFNQFQVDEKLPLLQADIGPEKLDYQQLLAEALEKNGKPILPVRRRKPVSFETQACPRCQAPQDYLYANNGAGGQLKCKVCQFKFQDGYAEKNKTVALRCPYCQNRLSIHNRRTKFDVWCCYNDKCSFRLGTIASMSPAEVADFNVHPTAHKVRYTWRTYNFELKGIAPESPIQAPVDLSRIQASPEVLGLVLTYHINYGLSARRTAAIMYDIHGVKISHQTIHNYEMAVAAVVRPFWANYPYKLSDQIVGDETYVRVKGKWNYIFYFYDAKCKLILADYVTPNRTTESAVIAIIQVLQKMPKIPENLNFVVDANPIYQVAQIYFAQQGIKFGIHQVVGLENKDEISREYRFLKQTIERLNRSYKENYRSSTGFGSATGSASYTALYSAAYNFLRPHEALRYRVPVELPQLRPFERMPDKWLALIELAQSQLPTAA
SIO_010081: LM010_RS16780
subclass of: SO_0000673
so part of: LM010_RS16780
location: complement(28147..29592)
location: region:28147-29592:-1
so has part: feature:28147-29592:-1:exon

WP_056963152.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:28147-29592:-1:exon

LM010_RS16785
type: Gene
subclass of: SO_0000704
RO_0002162: 88233
locus tag: LM010_RS16785
old locus tag: LM010_16785
pseudo: true
so part of: sequence
location: complement(<29713..29994)
location: region:29713-29994:-1
so has part: feature:29713-29994:-1:exon
subclass of: SO_0000010

position:29713:-1
position: 29713
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition

position:29994:-1
position: 29994
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:29713-29994:-1:exon

LM010_RS16785
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 88233
locus tag: LM010_RS16785
old locus tag: LM010_16785
inference: COORDINATES: similar to AA sequence:RefSeq:WP_003679899.1
note: incomplete; partial in the middle of a contig; missing C-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: DDE-type integrase/transposase/recombinase
SIO_010081: LM010_RS16785
subclass of: SO_0000673
so part of: LM010_RS16785
location: complement(<29713..29994)
location: region:29713-29994:-1
so has part: feature:29713-29994:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:29713-29994:-1:exon

LM010_RS16790
type: Gene
subclass of: SO_0000704
RO_0002162: 88233
locus tag: LM010_RS16790
old locus tag: LM010_16790
so part of: sequence
location: complement(30325..31794)
location: region:30325-31794:-1
so has part: feature:30325-31794:-1:exon
subclass of: SO_0000010

position:30325:-1
position: 30325
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:31794:-1
position: 31794
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:30325-31794:-1:exon

LM010_RS16790
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 88233
locus tag: LM010_RS16790
old locus tag: LM010_16790
inference: COORDINATES: protein motif:HMM:NF020291.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: primase C-terminal domain-containing protein
translation: MSLSSDLISLVLHNGLAKNKYRNSKRVVLDQSPEERPHGAIFLTRTKQALTEARGFIATSEEAVLANQACSHWTPNIFRYGTYSDDRRQVVVGHSENNLKQINAFVVDADFGDHKPHYNQDLLEQFIIKKKDLFDPEIWPTAILETPHGYQVYYVLWKSVFVSKKGTRYPAVEAAKTVSEQLRQSVLKNLPQVDVGCNHFGFFRLPSDDMVRFFEPSLTLDFATLLDWAMEIKLKMTGVTKPSTHDHQVDQPWFSALSRASVVRGDGDLGRNNTLLTLLLATYSSGWDQNRAYDFADEWNSRQPDPLRDTEVRRILKSAFSGNYQGASKAYIQHLMDRWAPEVRPFARTARQNWVKFRKPRHIRKYSHVSEWAQDLVKYVDRLGARSTSLQLTTADIREALHISRDSLNKALDYVAIHGLLRVQRTRGRNGGILLITMMMAGRQIETRRANQSQDWQEFLGLEQGESNVLSVTPENRPTIVLPGRLMDG
SIO_010081: LM010_RS16790
subclass of: SO_0000673
so part of: LM010_RS16790
location: complement(30325..31794)
location: region:30325-31794:-1
so has part: feature:30325-31794:-1:exon

WP_152164921.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:30325-31794:-1:exon

LM010_RS16795
type: Gene
subclass of: SO_0000704
RO_0002162: 88233
locus tag: LM010_RS16795
old locus tag: LM010_16795
pseudo: true
so part of: sequence
location: 32787..33643
location: region:32787-33643:1
so has part: feature:32787-33643:1:exon
subclass of: SO_0000010

position:32787:1
position: 32787
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:33643:1
position: 33643
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:32787-33643:1:exon

LM010_RS16795
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 88233
locus tag: LM010_RS16795
old locus tag: LM010_16795
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012952134.1
note: frameshifted; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: ParA family protein
SIO_010081: LM010_RS16795
subclass of: SO_0000673
so part of: LM010_RS16795
location: 32787..33643
location: region:32787-33643:1
so has part: feature:32787-33643:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:32787-33643:1:exon

LM010_RS16800
type: Gene
subclass of: SO_0000704
RO_0002162: 88233
locus tag: LM010_RS16800
old locus tag: LM010_16800
so part of: sequence
location: 33664..34011
location: region:33664-34011:1
so has part: feature:33664-34011:1:exon
subclass of: SO_0000010

position:33664:1
position: 33664
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:34011:1
position: 34011
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:33664-34011:1:exon

LM010_RS16800
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 88233
locus tag: LM010_RS16800
old locus tag: LM010_16800
inference: COORDINATES: similar to AA sequence:RefSeq:WP_016526703.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MSEKSDEPKKKKTPNLLQRRTHGAIKPTEPYVEQNTQPAQQKSSSDLNIQKVTRKQNNQKRSIKISSETYKDMSVLKTMENIRFDYEIIQMLIDDYQSRMSEADRRRFTVLRENY
SIO_010081: LM010_RS16800
subclass of: SO_0000673
so part of: LM010_RS16800
location: 33664..34011
location: region:33664-34011:1
so has part: feature:33664-34011:1:exon

WP_152164922.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:33664-34011:1:exon

LM010_RS17490
type: Gene
subclass of: SO_0000704
RO_0002162: 88233
locus tag: LM010_RS17490
so part of: sequence
location: 34294..34431
location: region:34294-34431:1
so has part: feature:34294-34431:1:exon
subclass of: SO_0000010

position:34294:1
position: 34294
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:34431:1
position: 34431
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:34294-34431:1:exon

LM010_RS17490
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 88233
locus tag: LM010_RS17490
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MQRKADGAIVFTPKHRNPFEVDWFNTDLKQSDVLGDQEALDSEWD
SIO_010081: LM010_RS17490
subclass of: SO_0000673
so part of: LM010_RS17490
location: 34294..34431
location: region:34294-34431:1
so has part: feature:34294-34431:1:exon

WP_225436277.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:34294-34431:1:exon

LM010_RS16810
type: Gene
subclass of: SO_0000704
RO_0002162: 88233
locus tag: LM010_RS16810
old locus tag: LM010_16810
so part of: sequence
location: complement(34656..34934)
location: region:34656-34934:-1
so has part: feature:34656-34934:-1:exon
subclass of: SO_0000010

position:34656:-1
position: 34656
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:34934:-1
position: 34934
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:34656-34934:-1:exon

LM010_RS16810
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 88233
locus tag: LM010_RS16810
old locus tag: LM010_16810
inference: COORDINATES: similar to AA sequence:RefSeq:WP_003589707.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: helix-turn-helix transcriptional regulator
translation: MAKNILFDDYLAEQLKDPEFKAGFDAESAKLESAVALMNERERAGLTQRELAERADVPQSTIARIEHGQNTSFDTMSKIAFALGKKLKVEFT
SIO_010081: LM010_RS16810
subclass of: SO_0000673
so part of: LM010_RS16810
location: complement(34656..34934)
location: region:34656-34934:-1
so has part: feature:34656-34934:-1:exon

WP_016363707.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:34656-34934:-1:exon

LM010_RS16815
type: Gene
subclass of: SO_0000704
RO_0002162: 88233
locus tag: LM010_RS16815
old locus tag: LM010_16815
so part of: sequence
location: complement(34936..35295)
location: region:34936-35295:-1
so has part: feature:34936-35295:-1:exon
subclass of: SO_0000010

position:34936:-1
position: 34936
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:35295:-1
position: 35295
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:34936-35295:-1:exon

LM010_RS16815
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 88233
locus tag: LM010_RS16815
old locus tag: LM010_16815
inference: COORDINATES: similar to AA sequence:RefSeq:WP_003589709.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: type II toxin-antitoxin system RelE/ParE family toxin
translation: MENPKFEFYTRPSGHNEFKEFLDDLKPVEKQKLVTVIAKTQKFGLQVAARQMWIRKISDGIFELRTTGSNIQRGLYFHVEGPHYVITHGFTKKTQKTPVSELNHAKELRTEYYDNLGGK
SIO_010081: LM010_RS16815
subclass of: SO_0000673
so part of: LM010_RS16815
location: complement(34936..35295)
location: region:34936-35295:-1
so has part: feature:34936-35295:-1:exon

WP_054719379.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:34936-35295:-1:exon

LM010_RS16820
type: Gene
subclass of: SO_0000704
RO_0002162: 88233
locus tag: LM010_RS16820
old locus tag: LM010_16820
so part of: sequence
location: complement(35790..36785)
location: region:35790-36785:-1
so has part: feature:35790-36785:-1:exon
subclass of: SO_0000010

position:35790:-1
position: 35790
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:36785:-1
position: 36785
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:35790-36785:-1:exon

LM010_RS16820
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 88233
locus tag: LM010_RS16820
old locus tag: LM010_16820
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MSKNLLISAADRRLLQQSEYMHLSPEHEKLIVYLDKEYRKDEVPEGILAQFRFHHDWVEQAKKEWRLFPGKAYLNREIAYPGGKRCEICDTNLPKNVVHVINNKNQREMYIGLDCEGNVLNGSVVVGRNLSIEEQARYEKFVLEHEKVIALIDHPYSRDSMFELSKVLKLKEDSFRKKAKLLLRQYLKTGKLSQREIQQLLETSDALRAKIDAQNRRYNDDRPGLNEALRNRLEKNQPEDVKVIVRLVQNDDGYLKTDAASRILDEQFLNEYAKRVRQTGGIGSSLDASCTQSARINLSAPTLDGRILLSFPSRDVIQEMGFQKVMLLRRR
SIO_010081: LM010_RS16820
subclass of: SO_0000673
so part of: LM010_RS16820
location: complement(35790..36785)
location: region:35790-36785:-1
so has part: feature:35790-36785:-1:exon

WP_054719382.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:35790-36785:-1:exon

LM010_RS16825
type: Gene
subclass of: SO_0000704
RO_0002162: 88233
locus tag: LM010_RS16825
old locus tag: LM010_16825
so part of: sequence
location: 37241..38284
location: region:37241-38284:1
so has part: feature:37241-38284:1:exon
subclass of: SO_0000010

position:37241:1
position: 37241
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:38284:1
position: 38284
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:37241-38284:1:exon

LM010_RS16825
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 88233
locus tag: LM010_RS16825
old locus tag: LM010_16825
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MAGSKKWDIEHKNLTKIYHARSQAKSFVKNMASARDLEELQTLLDEKKAVYKTQRDQLWRQFDAYAKYSDSDNTTWHSEPDKPLSMYVATSENVTIGDFIGRAAVHDQLWVYRPQLSKFDDRRFDPNRRFGEAPRSEANEKFSRWAYDFNRGKKGASNTTIFLESDRQVVIDKLHELYGFVETATVRFAADSFSRKVANANNDGFDFYYPIDEQPLIIWQGTGRGYFPAQNTTVYRGDLAVLTPNNPWDKNDTPLLQSVIPLDHLKKISDTIAADFEVVTEETSEAPLRIYQISTVYERKQKDGSSKQFKRDYGKVRATSKSAASKKFTEAHPGSTSELLITRVRNN
SIO_010081: LM010_RS16825
subclass of: SO_0000673
so part of: LM010_RS16825
location: 37241..38284
location: region:37241-38284:1
so has part: feature:37241-38284:1:exon

WP_152164923.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:37241-38284:1:exon

LM010_RS16835
type: Gene
subclass of: SO_0000704
RO_0002162: 88233
locus tag: LM010_RS16835
old locus tag: LM010_16835
pseudo: true
so part of: sequence
location: 38982..>39122
location: region:38982-39122:1
so has part: feature:38982-39122:1:exon
subclass of: SO_0000010

position:38982:1
position: 38982
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:39122:1
position: 39122
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition

urn:…
SIO_000300: 1
SIO_000628: feature:38982-39122:1:exon

LM010_RS16835
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 88233
locus tag: LM010_RS16835
old locus tag: LM010_16835
inference: COORDINATES: similar to AA sequence:RefSeq:WP_010623418.1
note: incomplete; partial in the middle of a contig; missing C-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: DNA polymerase
SIO_010081: LM010_RS16835
subclass of: SO_0000673
so part of: LM010_RS16835
location: 38982..>39122
location: region:38982-39122:1
so has part: feature:38982-39122:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:38982-39122:1:exon

LM010_RS16840
type: Gene
subclass of: SO_0000704
RO_0002162: 88233
locus tag: LM010_RS16840
old locus tag: LM010_16840
so part of: sequence
location: complement(39242..39924)
location: region:39242-39924:-1
so has part: feature:39242-39924:-1:exon
subclass of: SO_0000010

position:39242:-1
position: 39242
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:39924:-1
position: 39924
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:39242-39924:-1:exon

LM010_RS16840
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 88233
locus tag: LM010_RS16840
old locus tag: LM010_16840
inference: COORDINATES: similar to AA sequence:RefSeq:WP_010490996.1
ribosomal slippage: true
GO function: GO:0004803 - transposase activity [Evidence IEA]
note: programmed frameshift; Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: IS6 family transposase
translation: MNYFKGRHFQQDIIIVAVGYYFRFSLSYHDIVELLRDRGFSVHHTTVMRWVHHYGPIFKALWRQHQTSHTKSWRIDETYINVKGHWTYLYRAIDSNGLTLDFELRKHRDYAAAYHFLKRLLTTNGRPDRLVTDQYQATLKAVKHLMKQDYLSKSAHQCSKYRNNLIEQDHRFIKRHRVRSASFQSIRTASATLNGIEVIHALRKKTRRELSLIGFSAVDELKAMLPA
SIO_010081: LM010_RS16840
subclass of: SO_0000673
so part of: LM010_RS16840
location: complement(join(39242..39807,39807..39924))
location: region:39242-39924:-1
so has part: feature:39807-39924:-1:exon
so has part: feature:39242-39807:-1:exon

WP_191991460.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:39807-39924:-1:exon

position:39807:-1
position: 39807
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:39242-39807:-1:exon

LM010_RS16845
type: Gene
subclass of: SO_0000704
RO_0002162: 88233
locus tag: LM010_RS16845
old locus tag: LM010_16845
so part of: sequence
location: 40075..40569
location: region:40075-40569:1
so has part: feature:40075-40569:1:exon
subclass of: SO_0000010

position:40075:1
position: 40075
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:40569:1
position: 40569
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:40075-40569:1:exon

LM010_RS16845
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 88233
locus tag: LM010_RS16845
old locus tag: LM010_16845
inference: COORDINATES: protein motif:HMM:NF015431.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: LysR substrate-binding domain-containing protein
translation: MSKLLFDLLVIQQGEYSLAHDTFALLTSTEFLDLPQDAAELVVTYANFAHTGYQQIARAFLPASFLISANRPLEAHRFLINSDQHCPFRAQTLRYLHQDLSQVQEIDSWDSIIHLIQAGQGIALLPDYLMARDDLMRTTPHQRFKIPYATFVRSASSLYESVTT
SIO_010081: LM010_RS16845
subclass of: SO_0000673
so part of: LM010_RS16845
location: 40075..40569
location: region:40075-40569:1
so has part: feature:40075-40569:1:exon

WP_191991461.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:40075-40569:1:exon

LM010_RS16850
type: Gene
subclass of: SO_0000704
RO_0002162: 88233
locus tag: LM010_RS16850
old locus tag: LM010_16850
pseudo: true
so part of: sequence
location: 40625..41466
location: region:40625-41466:1
so has part: feature:40625-41466:1:exon
subclass of: SO_0000010

position:40625:1
position: 40625
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:41466:1
position: 41466
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:40625-41466:1:exon

LM010_RS16850
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 88233
locus tag: LM010_RS16850
old locus tag: LM010_16850
inference: COORDINATES: similar to AA sequence:RefSeq:WP_016364263.1
note: frameshifted; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: DegV family protein
SIO_010081: LM010_RS16850
subclass of: SO_0000673
so part of: LM010_RS16850
location: 40625..41466
location: region:40625-41466:1
so has part: feature:40625-41466:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:40625-41466:1:exon

LM010_RS16855
type: Gene
subclass of: SO_0000704
RO_0002162: 88233
locus tag: LM010_RS16855
old locus tag: LM010_16855
so part of: sequence
location: 41657..42121
location: region:41657-42121:1
so has part: feature:41657-42121:1:exon
subclass of: SO_0000010

position:41657:1
position: 41657
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:42121:1
position: 42121
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:41657-42121:1:exon

LM010_RS16855
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 88233
locus tag: LM010_RS16855
old locus tag: LM010_16855
inference: COORDINATES: similar to AA sequence:RefSeq:WP_010078039.1
GO function: GO:0010181 - FMN binding [Evidence IEA]
GO process: GO:0036211 - protein modification process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: class Ib ribonucleoside-diphosphate reductase assembly flavoprotein NrdI
translation: MSIYCISASGNTTNFVERLTQHLATLDVCVHAINVKATPDPKPLDAPFVSFLPAFLKGGNGVNNGYTEILTGILADYLVYADNYKRCVGIIGSGNRNFNKQFALTAKQYAQRFGFPYLTEFELRGSENDIVRIGQMLLAYAQPTPSAAWPNPEA
SIO_010081: LM010_RS16855
subclass of: SO_0000673
so part of: LM010_RS16855
location: 41657..42121
location: region:41657-42121:1
so has part: feature:41657-42121:1:exon

WP_191991465.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:41657-42121:1:exon

LM010_RS16860
type: Gene
subclass of: SO_0000704
RO_0002162: 88233
gene: nrdE
locus tag: LM010_RS16860
old locus tag: LM010_16860
pseudo: true
so part of: sequence
location: 42164..44303
location: region:42164-44303:1
so has part: feature:42164-44303:1:exon
subclass of: SO_0000010

position:42164:1
position: 42164
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:44303:1
position: 44303
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:42164-44303:1:exon

LM010_RS16860
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 88233
gene: nrdE
locus tag: LM010_RS16860
old locus tag: LM010_16860
inference: COORDINATES: similar to AA sequence:RefSeq:WP_003646150.1
GO function: GO:0005524 - ATP binding [Evidence IEA]; GO:0004748 - ribonucleoside-diphosphate reductase activity, thioredoxin disulfide as acceptor [Evidence IEA]
GO process: GO:0006260 - DNA replication [Evidence IEA]
note: frameshifted; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: class 1b ribonucleoside-diphosphate reductase subunit alpha
SIO_010081: LM010_RS16860
subclass of: SO_0000673
so part of: LM010_RS16860
location: 42164..44303
location: region:42164-44303:1
so has part: feature:42164-44303:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:42164-44303:1:exon

LM010_RS16865
type: Gene
subclass of: SO_0000704
RO_0002162: 88233
locus tag: LM010_RS16865
old locus tag: LM010_16865
so part of: sequence
location: 44472..45389
location: region:44472-45389:1
so has part: feature:44472-45389:1:exon
subclass of: SO_0000010

position:44472:1
position: 44472
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:45389:1
position: 45389
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:44472-45389:1:exon

LM010_RS16865
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 88233
locus tag: LM010_RS16865
old locus tag: LM010_16865
inference: COORDINATES: protein motif:HMM:NF012490.2
GO process: GO:0009263 - deoxyribonucleotide biosynthetic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: ribonucleotide-diphosphate reductase subunit beta
translation: MAYLYYKAINWDETEDEFDAMIWEQLTNNFWLDIRVPITEDQAAWAALDPTTQTKIGRALASASLLAAYQSERCAPALRSCRRTQQEEAVLNIMTFMESVHTKGYTTIFRGLGEDDNAASFFAWADSDAATQAALTKLDDAIQSPVAPVRQAAFILIETELLYNRLAPVLAVTTLPNVARMLTNILAGSLIFVNYIGYKWRQNLAALPAAEQTAASAAIQALEQALAEWERTWSTVLDPHADDDALMLGLHHANSLLDLPLGEVADTPLAALVETTRQRVLTPVAHEQIVDVDATEAMMEEDYDF
SIO_010081: LM010_RS16865
subclass of: SO_0000673
so part of: LM010_RS16865
location: 44472..45389
location: region:44472-45389:1
so has part: feature:44472-45389:1:exon

WP_152164927.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:44472-45389:1:exon

LM010_RS16870
type: Gene
subclass of: SO_0000704
RO_0002162: 88233
gene: nrdF
locus tag: LM010_RS16870
old locus tag: LM010_16870
so part of: sequence
location: 45431..46381
location: region:45431-46381:1
so has part: feature:45431-46381:1:exon
subclass of: SO_0000010

position:45431:1
position: 45431
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:46381:1
position: 46381
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:45431-46381:1:exon

LM010_RS16870
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 88233
gene: nrdF
locus tag: LM010_RS16870
old locus tag: LM010_16870
EC number: 1.17.4.1
inference: COORDINATES: similar to AA sequence:RefSeq:WP_003681260.1
GO component: GO:0005971 - ribonucleoside-diphosphate reductase complex [Evidence IEA]
GO function: GO:0030145 - manganese ion binding [Evidence IEA]; GO:0004748 - ribonucleoside-diphosphate reductase activity, thioredoxin disulfide as acceptor [Evidence IEA]
GO process: GO:0009265 - 2'-deoxyribonucleotide biosynthetic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: class 1b ribonucleoside-diphosphate reductase subunit beta
translation: MTFTTVNWNTIEDEFDEYVWDKATAQFWLDTRVPVSHDLATWRTLSPTEKDVINKAVGGLALLDTLQSEEGVNVMREDARTRKEAAVINDFLMMESIHAKSYGTILISLNDQKTINAVYDWMNNDPRMQYKARVINEIYQTGNNIEKKVASVFLEGILYYTNFFTPLWYRGNNKLANLSEIIKLVIRDESVHGTYLGYKFQLGFNELPDAQKKTFKAWMDDLLDDLLENEFAFSDALYAPIGLADEVKQFVRYNANKSLQNMGFPARFEHAAIEDIDPIVMNGISTETANHDFFSQVGAGYLMGTAESMQESDYDF
SIO_010081: LM010_RS16870
subclass of: SO_0000673
so part of: LM010_RS16870
location: 45431..46381
location: region:45431-46381:1
so has part: feature:45431-46381:1:exon

WP_152164928.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:45431-46381:1:exon

LM010_RS16875
type: Gene
subclass of: SO_0000704
RO_0002162: 88233
locus tag: LM010_RS16875
old locus tag: LM010_16875
so part of: sequence
location: complement(46827..48029)
location: region:46827-48029:-1
so has part: feature:46827-48029:-1:exon
subclass of: SO_0000010

position:46827:-1
position: 46827
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:48029:-1
position: 48029
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:46827-48029:-1:exon

LM010_RS16875
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 88233
locus tag: LM010_RS16875
old locus tag: LM010_16875
inference: COORDINATES: protein motif:HMM:NF025080.2
GO function: GO:0004803 - transposase activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: IS1380 family transposase
translation: MFAPDPFRQLANQCLKLPDQRRFWKASMIDIFLEKLLLDVAGYLHDSSANDWQRDPVLAATLGSSRLVSQPSLSRFFKRLEDADLDDFRKLIWQVAALAFRLSGQSRFVLDIDSTHCDTFGNQERSAFNAHYMAYGYHPQVVFDQESGLLLDALMRPGNEYTGKEADKFVETTFSRLSALPQSTSVIIRGDSGFATPKFYEMCDTHGVDFLVRLKANSKLGKLAETALVDCPPKYEESKCVYHEFKYQAASWGKARRVIVCSTHTADELVPWNHAFVVTILASEAPETLFKTYRQRGNAENQIKELKCGFGFDKTDSSTFARNTARALITGIAYNLVQLFKQLFVSEDRRSTISSLRFSLFHIAGRITWHARRVVIHLASNYVYKNWFSRLMDEVHQLAT
SIO_010081: LM010_RS16875
subclass of: SO_0000673
so part of: LM010_RS16875
location: complement(46827..48029)
location: region:46827-48029:-1
so has part: feature:46827-48029:-1:exon

WP_225436283.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:46827-48029:-1:exon

LM010_RS16880
type: Gene
subclass of: SO_0000704
RO_0002162: 88233
locus tag: LM010_RS16880
old locus tag: LM010_16880
so part of: sequence
location: complement(48075..48758)
location: region:48075-48758:-1
so has part: feature:48075-48758:-1:exon
subclass of: SO_0000010

position:48075:-1
position: 48075
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:48758:-1
position: 48758
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:48075-48758:-1:exon

LM010_RS16880
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 88233
locus tag: LM010_RS16880
old locus tag: LM010_16880
inference: COORDINATES: similar to AA sequence:RefSeq:WP_003660036.1
GO function: GO:0004803 - transposase activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: IS6 family transposase
translation: MNHFKGRHFQKDIILVAVGYYFRFSLSYRDIVELLRDRGITVHHTTVMRWVHHYGPIFKALWRRHQTAHAKSWRIDETYIRVKGRLAYLYRAIDSNGLTMDFELRKHRDYTASYHFLKRLLTTNGRPDRLVTDQYRATLKAVKHLIKQDYLSKSAHQCSKYRNNLIEQDHRFIKRHRVRSASFQSIRTASAMLSGVETVHAIRKRTRRELSLIGFSVVDELEALLAA
SIO_010081: LM010_RS16880
subclass of: SO_0000673
so part of: LM010_RS16880
location: complement(48075..48758)
location: region:48075-48758:-1
so has part: feature:48075-48758:-1:exon

WP_152164930.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:48075-48758:-1:exon

LM010_RS16885
type: Gene
subclass of: SO_0000704
RO_0002162: 88233
locus tag: LM010_RS16885
old locus tag: LM010_16885
so part of: sequence
location: 49108..49200
location: region:49108-49200:1
so has part: feature:49108-49200:1:exon
subclass of: SO_0000010

position:49108:1
position: 49108
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:49200:1
position: 49200
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:49108-49200:1:exon

LM010_RS16885
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 88233
locus tag: LM010_RS16885
old locus tag: LM010_16885
inference: COORDINATES: protein motif:HMM:NF033608.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: type I toxin-antitoxin system Fst family toxin
translation: MHELLTLIVAPCVVGIVTALFADWLDRRHR
SIO_010081: LM010_RS16885
subclass of: SO_0000673
so part of: LM010_RS16885
location: 49108..49200
location: region:49108-49200:1
so has part: feature:49108-49200:1:exon

WP_152164931.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:49108-49200:1:exon

LM010_RS16890
type: Gene
subclass of: SO_0000704
RO_0002162: 88233
locus tag: LM010_RS16890
old locus tag: LM010_16890
so part of: sequence
location: complement(49402..49602)
location: region:49402-49602:-1
so has part: feature:49402-49602:-1:exon
subclass of: SO_0000010

position:49402:-1
position: 49402
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:49602:-1
position: 49602
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:49402-49602:-1:exon

LM010_RS16890
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 88233
locus tag: LM010_RS16890
old locus tag: LM010_16890
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MGEEKSRIAVTLSEQAINVLDELVRKTQAQAEHTLANQPYTVKVTRSNVIENLLMQQTQHQGGSTF
SIO_010081: LM010_RS16890
subclass of: SO_0000673
so part of: LM010_RS16890
location: complement(49402..49602)
location: region:49402-49602:-1
so has part: feature:49402-49602:-1:exon

WP_152164932.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:49402-49602:-1:exon

LM010_RS16895
type: Gene
subclass of: SO_0000704
RO_0002162: 88233
locus tag: LM010_RS16895
old locus tag: LM010_16895
so part of: sequence
location: complement(50387..51256)
location: region:50387-51256:-1
so has part: feature:50387-51256:-1:exon
subclass of: SO_0000010

position:50387:-1
position: 50387
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:51256:-1
position: 51256
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:50387-51256:-1:exon

LM010_RS16895
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 88233
locus tag: LM010_RS16895
old locus tag: LM010_16895
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: ABC transporter ATP-binding protein
translation: MRDDLFIIPSLKSCLRNQLTSTSRKTCPDFGPQQSGEAFQKLFGWILAAIGVTLVLFVVFPKNINESGLTTSKSFVMGENTFTYANAKRYSNQTYRLGFYVSDNQLDPLAAVRAKLRTKSHENGEILSSSLTQVSPDYYVVTVKQVPKKQALLYVVIGDKKTTGSGLEAANSQALLVQKAKNAGTYKRPTMHQLQQEYLAYMVKYYSQNIQKLERKVAKNKSNIAKLKKILSKQNQSLDLQTGAQKSDTKSKIAQTKSSIKQHQTSVKNFEKAINNARDARANYGEKLN
SIO_010081: LM010_RS16895
subclass of: SO_0000673
so part of: LM010_RS16895
location: complement(50387..51256)
location: region:50387-51256:-1
so has part: feature:50387-51256:-1:exon

WP_225436278.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:50387-51256:-1:exon

LM010_RS17495
type: Gene
subclass of: SO_0000704
RO_0002162: 88233
locus tag: LM010_RS17495
old locus tag: LM010_16900
so part of: sequence
location: 51581..52420
location: region:51581-52420:1
so has part: feature:51581-52420:1:exon
subclass of: SO_0000010

position:51581:1
position: 51581
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:52420:1
position: 52420
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:51581-52420:1:exon

LM010_RS17495
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 88233
locus tag: LM010_RS17495
old locus tag: LM010_16900
inference: COORDINATES: protein motif:HMM:NF033516.0
GO function: GO:0004803 - transposase activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: IS3 family transposase
translation: MPNPRCFQSSVLSLSIPKPSKRRAEDAGLKQRILRIFAEFKQRYGVMKIHHELNLELQPLQLRCSPRRISRLMKELDIHSVTVNKWKAASASKTKVEQRPNLLKQDFSTTGLNQKWTADMTYIQTKRNGWCYLSTIMDLHSRRIIGYSFSKKMATDLVLKTLESAVKNRTITGDLIIHTDLGSQYTSDDYNQRLTELHIRHSYSRKGCPYDNAPMESFHASLKKECVYPVPVFEDYETAAAVLFEYVHAFYNRKRIHSSLGYQTPLQVEIATLTSQMAA
SIO_010081: LM010_RS17495
subclass of: SO_0000673
so part of: LM010_RS17495
location: 51581..52420
location: region:51581-52420:1
so has part: feature:51581-52420:1:exon

WP_003680802.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:51581-52420:1:exon

LM010_RS16905
type: Gene
subclass of: SO_0000704
RO_0002162: 88233
locus tag: LM010_RS16905
old locus tag: LM010_16905
so part of: sequence
location: 52687..52893
location: region:52687-52893:1
so has part: feature:52687-52893:1:exon
subclass of: SO_0000010

position:52687:1
position: 52687
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:52893:1
position: 52893
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:52687-52893:1:exon

LM010_RS16905
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 88233
locus tag: LM010_RS16905
old locus tag: LM010_16905
inference: COORDINATES: protein motif:HMM:NF040237.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: KxYKxGKxW signal peptide domain-containing protein
translation: MNKNSTTETKRHYKMYKAGSKWMTAAIITFGTGLIVLGGTATQSVAADTTTAPTEKTSQCTSPCQVDR
SIO_010081: LM010_RS16905
subclass of: SO_0000673
so part of: LM010_RS16905
location: 52687..52893
location: region:52687-52893:1
so has part: feature:52687-52893:1:exon

WP_152164933.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:52687-52893:1:exon

LM010_RS16910
type: Gene
subclass of: SO_0000704
RO_0002162: 88233
locus tag: LM010_RS16910
old locus tag: LM010_16910
so part of: sequence
location: complement(52918..53811)
location: region:52918-53811:-1
so has part: feature:52918-53811:-1:exon
subclass of: SO_0000010

position:52918:-1
position: 52918
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:53811:-1
position: 53811
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:52918-53811:-1:exon

LM010_RS16910
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 88233
locus tag: LM010_RS16910
old locus tag: LM010_16910
inference: COORDINATES: similar to AA sequence:RefSeq:WP_010011731.1
GO function: GO:0004803 - transposase activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: IS3 family transposase
translation: MNKQHRQAYLAIKETSQGKRGAVTKLLAVVGVSRQAYYKGLKREETAWEARDRRLKERTQHWFDFHHQGIGAGNLLVNLQHDESITFEVTHKMVRRVMRELGLKCQIRVKKHSRQKASEQYIQDNVLNQNFDTDAPNKVWLSDSTELRFGPNGEYKIRLSGVLDLYGRLLLSHHLSVTETSAAEIEVFQRAFDSVGAVHPLIHTDRGSAYTSGAFNNFLARYDVTRSMSRPGTPFDNAPMERWWNEFKLRWMDRHSMPKTLQELEKLVEEGIEYFNCHNRSAQRNGLTPDEYWNEAA
SIO_010081: LM010_RS16910
subclass of: SO_0000673
so part of: LM010_RS16910
location: complement(52918..53811)
location: region:52918-53811:-1
so has part: feature:52918-53811:-1:exon

WP_056962884.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:52918-53811:-1:exon

LM010_RS17500
type: Gene
subclass of: SO_0000704
RO_0002162: 88233
locus tag: LM010_RS17500
so part of: sequence
location: complement(53808..54119)
location: region:53808-54119:-1
so has part: feature:53808-54119:-1:exon
subclass of: SO_0000010

position:53808:-1
position: 53808
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:54119:-1
position: 54119
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:53808-54119:-1:exon

LM010_RS17500
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 88233
locus tag: LM010_RS17500
inference: COORDINATES: protein motif:HMM:NF013677.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: helix-turn-helix domain-containing protein
translation: MRKKTTFEERIEVVEYVVKHKHSYTEAAKHFQVSYQQARSWVLKAKNGGYEALVDNRGHHKDESELTDLDKANLRIRQLEAELKDKELVEQFAKKLLELQRKG
SIO_010081: LM010_RS17500
subclass of: SO_0000673
so part of: LM010_RS17500
location: complement(53808..54119)
location: region:53808-54119:-1
so has part: feature:53808-54119:-1:exon

WP_054720109.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:53808-54119:-1:exon

LM010_RS17505
type: Gene
subclass of: SO_0000704
RO_0002162: 88233
locus tag: LM010_RS17505
so part of: sequence
location: complement(54065..54481)
location: region:54065-54481:-1
so has part: feature:54065-54481:-1:exon
subclass of: SO_0000010

position:54065:-1
position: 54065
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:54481:-1
position: 54481
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:54065-54481:-1:exon

LM010_RS17505
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 88233
locus tag: LM010_RS17505
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: transposase
translation: MSRSKFTALEKLKLLEEFKESDLPRATFERQHGIGKDSLKRWSLRYERDGLEGLEEARKNIHYSKELKETVVFAYLNGEGTLENLANKYGLRNVAQAKTWLDTYNGDKPLTASPSRKQVPLCVRRQLSKSESKSLSMW
SIO_010081: LM010_RS17505
subclass of: SO_0000673
so part of: LM010_RS17505
location: complement(54065..54481)
location: region:54065-54481:-1
so has part: feature:54065-54481:-1:exon

WP_225436279.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:54065-54481:-1:exon

LM010_RS16920
type: Gene
subclass of: SO_0000704
RO_0002162: 88233
locus tag: LM010_RS16920
old locus tag: LM010_16920
so part of: sequence
location: 55016..58987
location: region:55016-58987:1
so has part: feature:55016-58987:1:exon
subclass of: SO_0000010

position:55016:1
position: 55016
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:58987:1
position: 58987
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:55016-58987:1:exon

LM010_RS16920
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 88233
locus tag: LM010_RS16920
old locus tag: LM010_16920
inference: COORDINATES: similar to AA sequence:RefSeq:WP_016527424.1
GO function: GO:0008236 - serine-type peptidase activity [Evidence IEA]
GO process: GO:0006508 - proteolysis [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: S8 family serine peptidase
translation: MVVAVIDSGVQPHADLRLSDDSTTTLTKEKAEAAIAKLGYGTYVNSKIPFAYDYVNNDSVNTGTTVAGSTHGEHVAGIIAANGTTADGATGKEKASTYVKGVAPEAQILAMQVIDEFPDENANDISRAIRDAVALGANAIQMSLGIGVTEQDLTDEEQAAVQYATEHGVFVSISAGNNAIAGSIIGSKTPNDISTAYAPKNDSTIGDPGAAASAMTVAAETSATGADSQMDGFSSWGPMADYTLKPDISAPGDNVTSTAIDPTTNTQTYAVESGTSMAGPFNAGAALLVMQKIKATQPNLTGADLVKAVKLALMNAAEPMKDINYPDTYISPRRQGAGQIDVAKAGDLTVSAEGSNDAGSVSLGKIGKTTTFTVTLTNHGKTAQNYTVDTNGGPLTQVRDASNGNTVHDETLVGATVNTDTANFTLAAGETKQVTFKLSLDDSVAANRLVEGYLTFKATDAAQTISVPYLGYYGDLTDEQVIDAPANSGESIFNGGYLVDNNNNPLGVTDAASLSNLVNTDTTGKYTWTLVPTYVDNKKVSFSPNGDGASDTVFPYVFSKQNLKSVTIQILDAQGHVVRVLDKENNTSKSYLQNGNSFNSDLGLSTDMRLDPNAFTWDGKVYDQATGKYVTAPDGKYTYRLVTEQYNTGAQQNQDYDLPVTVDTVAPTLTGLSYQDGRVSVHYDDQGAGFTKFSDLALKIGNQAYGVNLNNNGQNNDGTLSFELTAAQKAALENSDGSLTLTLTDVAGNKTSASLQATAGTHQTDTTTPTSDVAPQFTWKVGDGPYNYWRSKKGFVQAVSDQTSFTAYAQVPAGVDWIVYATDAQTGKVFPGTVDTKTGTVTFNLTESAPYGDFVGTVLSPTADFGTYEEAGRADGDEMIVFLDANGTAGYGHFSQKNVHVVVPLQDNAKAAANATKTSGAPVLGGRAFSQITTHAQPTAGLKFDKFNDNSFTLVGADQVADIYNAQTGQLTITGHVDNPAGKTLTVTDATEPAKTVAIGADGKFSFTVPFKAAEQQSVGYRLTEPATDGSKSTKTAYGELQIYLDTIFPTLDLPQADTLKVDDQGNYDITTTNNTFTVSGTVNDNINGYRLYTNDDNVVHQKNLAGFNNHLDPLSTTSNPYGAADFNQTYTLKDGDNYFTVTAVDMVGNKVTKVFHVVKVKTPSPTPGDNGNTSGTGNSGNGNSNQQGTGGNAGNQGGNAGNAGNAGNQGNNRGTQGGNGSGQTPATGNGTPTTPTTGTGTNGGNGNNGQQSPKLVTLDNKLKNQTKTPAAKNGTTANATKQAATGKTMPQAGESQSPLAIIGLAIVSIFSFMGFASRKKRI
SIO_010081: LM010_RS16920
subclass of: SO_0000673
so part of: LM010_RS16920
location: 55016..58987
location: region:55016-58987:1
so has part: feature:55016-58987:1:exon

WP_225436280.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:55016-58987:1:exon

LM010_RS16925
type: Gene
subclass of: SO_0000704
RO_0002162: 88233
locus tag: LM010_RS16925
old locus tag: LM010_16925
so part of: sequence
location: 59036..59302
location: region:59036-59302:1
so has part: feature:59036-59302:1:exon
subclass of: SO_0000010

position:59036:1
position: 59036
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:59302:1
position: 59302
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:59036-59302:1:exon

LM010_RS16925
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 88233
locus tag: LM010_RS16925
old locus tag: LM010_16925
inference: COORDINATES: similar to AA sequence:RefSeq:WP_016387464.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MQPVTITNLDRLLTALIQARQRGELQQTVVERVPSEPGADHIFGTRTDKGEFKPLIRFRFDQQLPDNYAEALKQHGYQLEVLHEKHRS
SIO_010081: LM010_RS16925
subclass of: SO_0000673
so part of: LM010_RS16925
location: 59036..59302
location: region:59036-59302:1
so has part: feature:59036-59302:1:exon

WP_054719500.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:59036-59302:1:exon

LM010_RS17620
type: Gene
subclass of: SO_0000704
RO_0002162: 88233
locus tag: LM010_RS17620
old locus tag: LM010_16930
so part of: sequence
location: 59691..60503
location: region:59691-60503:1
so has part: feature:59691-60503:1:exon
subclass of: SO_0000010

position:59691:1
position: 59691
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:60503:1
position: 60503
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:59691-60503:1:exon

LM010_RS17620
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 88233
locus tag: LM010_RS17620
old locus tag: LM010_16930
inference: COORDINATES: protein motif:HMM:NF025080.2
GO function: GO:0004803 - transposase activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: IS1380 family transposase
translation: MTADGGQLSNDAGLVLFQEFLHRINFRQLANQCLKLPDQRRFWKASMIDIFLEKLLLDVAGYLHDSSANDWQRDPVLAATLGSSRLVSQPSLSRFFKRLEDADLDDFRKLIWQVAALAFRLSGQSRFVLDIDSTHCDTFGNQERSAFNAHYMAYGYHPQVVFDQESGLLLDALMRPGNEYTGKEADKFVETTFSRLSALPQSTSVIIRGDSGFAAPKFYEMCDTHGVDFLVRLKANSKLGKLAETALVDCPPKYEESKCVYHEFKYQAAS
SIO_010081: LM010_RS17620
subclass of: SO_0000673
so part of: LM010_RS17620
location: 59691..60503
location: region:59691-60503:1
so has part: feature:59691-60503:1:exon

WP_191991423.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:59691-60503:1:exon

LM010_RS17625
type: Gene
subclass of: SO_0000704
RO_0002162: 88233
locus tag: LM010_RS17625
old locus tag: LM010_16935
pseudo: true
so part of: sequence
location: <60592..60936
location: region:60592-60936:1
so has part: feature:60592-60936:1:exon
subclass of: SO_0000010

position:60592:1
position: 60592
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition

position:60936:1
position: 60936
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:60592-60936:1:exon

LM010_RS17625
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 88233
locus tag: LM010_RS17625
old locus tag: LM010_16935
inference: COORDINATES: protein motif:HMM:NF025080.2
note: incomplete; partial in the middle of a contig; missing N-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: transposase
SIO_010081: LM010_RS17625
subclass of: SO_0000673
so part of: LM010_RS17625
location: <60592..60936
location: region:60592-60936:1
so has part: feature:60592-60936:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:60592-60936:1:exon

LM010_RS16940
type: Gene
subclass of: SO_0000704
RO_0002162: 88233
locus tag: LM010_RS16940
old locus tag: LM010_16940
pseudo: true
so part of: sequence
location: 61390..62543
location: region:61390-62543:1
so has part: feature:61390-62543:1:exon
subclass of: SO_0000010

position:61390:1
position: 61390
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:62543:1
position: 62543
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:61390-62543:1:exon

LM010_RS16940
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 88233
locus tag: LM010_RS16940
old locus tag: LM010_16940
inference: COORDINATES: similar to AA sequence:RefSeq:WP_013356282.1
note: frameshifted; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: cation:proton antiporter
SIO_010081: LM010_RS16940
subclass of: SO_0000673
so part of: LM010_RS16940
location: 61390..62543
location: region:61390-62543:1
so has part: feature:61390-62543:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:61390-62543:1:exon