Desulfobacca acetoxidans DSM 11109, complete sequence.
Bacteria; Proteobacteria; Deltaproteobacteria; Syntrophales; Syntrophaceae; Desulfobacca.
Complete genome sequence of the acetate-degrading sulfate reducer Desulfobacca acetoxidans type strain (ASRB2)
Submitted (30-MAR-2011) US DOE Joint Genome Institute, 2800 Mitchell Drive, Walnut Creek, CA 94598-1698, USA
REFSEQ INFORMATION: The reference sequence is identical to\nCP002629.1.\nURL -- http://www.jgi.doe.gov\nJGI Project ID: 4087663\nSource DNA and organism available from Hans-Peter Klenk at the\nGerman Collection of Microorganisms and Cell Cultures (DSMZ)\n(hans-peter.klenk@dsmz.de)\nContacts: Jonathan A. Eisen (jaeisen@ucdavis.edu)\n David Bruce (microbe@cuba.jgi-psf.org)\nWhole genome sequencing and draft assembly at JGI-PGF\nFinishing done by JGI-LANL\nAnnotation by JGI-ORNL and JGI-PGF\nThe JGI and collaborators endorse the principles for the\ndistribution and use of large scale sequencing data adopted by the\nlarger genome sequencing community and urge users of this data to\nfollow them. It is our intention to publish the work of this\nproject in a timely fashion and we welcome collaborative\ninteraction on the project and analysis.\n(http://www.genome.gov/page.cfm?pageID=10506376).\nThe annotation was added by the NCBI Prokaryotic Genome Annotation\nPipeline (PGAP). Information about PGAP can be found here:\nhttps://www.ncbi.nlm.nih.gov/genome/annotation_prok/\n\n##MIGS-Data-START##\ninvestigation_type :: bacteria_archaea\nproject_name :: Desulfobacca acetoxidans ASRB2, DSM 11109\ncollection_date :: Missing\nlat_lon :: 51.970 5.665\ndepth :: Missing\nalt_elev :: Missing\ncountry :: Netherlands\nenvironment :: Fresh water, Fresh water\nnum_replicons :: 1\nref_biomaterial :: DSM 11109, ATCC 700848\nbiotic_relationship :: Free living\ntrophic_level :: Missing\nrel_to_oxygen :: Anaerobe\nisol_growth_condt :: 10319454\nsequencing_meth :: WGS\nassembly :: Newbler v. 2.3 (pre-release)\nfinishing_strategy :: Finished\nGOLD Stamp ID :: Gi03015\nType Strain :: Yes\nGreengenes ID :: 10776\nFunding Program :: DOE-GEBA 2007\nGene Calling Method :: Prodigal 1.4, GenePRIMP\nIsolation Site :: Anaerobic granular sludge of a pilot-scale\n UASB reactor (1.7 1) fed with acetate and an\n excess of sulfate.\nIsolation Comments :: isolated by S. J. W. H. Oude Elferink\nCell Shape :: Oval-shaped\nMotility :: Nonmotile\nSporulation :: Nonsporulating\nTemperature Range :: Mesophile\nTemperature Optimum :: 37C\nGram Staining :: Gram-\n##MIGS-Data-END##\n\n##Genome-Assembly-Data-START##\nFinishing Goal :: Finished\nCurrent Finishing Status :: Finished\nAssembly Method :: Newbler v. 2.3\nGenome Coverage :: 30x\nSequencing Technology :: 454/Illumina\n##Genome-Assembly-Data-END##\n\n##Genome-Annotation-Data-START##\nAnnotation Provider :: NCBI RefSeq\nAnnotation Date :: 08/21/2022 08:55:09\nAnnotation Pipeline :: NCBI Prokaryotic Genome\n Annotation Pipeline (PGAP)\nAnnotation Method :: Best-placed reference protein\n set; GeneMarkS-2+\nAnnotation Software revision :: 6.2\nFeatures Annotated :: Gene; CDS; rRNA; tRNA; ncRNA;\n repeat_region\nGenes (total) :: 2,955\nCDSs (total) :: 2,901\nGenes (coding) :: 2,882\nCDSs (with protein) :: 2,882\nGenes (RNA) :: 54\nrRNAs :: 2, 1, 1 (5S, 16S, 23S)\ncomplete rRNAs :: 2, 1, 1 (5S, 16S, 23S)\ntRNAs :: 46\nncRNAs :: 4\nPseudo Genes (total) :: 19\nCDSs (without protein) :: 19\nPseudo Genes (ambiguous residues) :: 0 of 19\nPseudo Genes (frameshifted) :: 0 of 19\nPseudo Genes (incomplete) :: 18 of 19\nPseudo Genes (internal stop) :: 1 of 19\nCRISPR Arrays :: 4\n##Genome-Annotation-Data-END##\nCOMPLETENESS: full length.
anaerobic granular sludge of a pilot-scale UASB reacter fed with acetate and an excess of sulfate
COORDINATES: protein motif:HMM:TIGR00362.1
GO:0005524 - ATP binding [Evidence IEA]; GO:0003677 - DNA binding [Evidence IEA]; GO:0003688 - DNA replication origin binding [Evidence IEA]
GO:0006270 - DNA replication initiation [Evidence IEA]; GO:0006275 - regulation of DNA replication [Evidence IEA]
Derived by automated computational analysis using gene prediction method: Protein Homology.
chromosomal replication initiator protein DnaA
COORDINATES: protein motif:HMM:NF013232.2
COORDINATES: protein motif:HMM:TIGR00745.1
COORDINATES: protein motif:HMM:NF021230.2
COORDINATES: similar to AA sequence:RefSeq:WP_017373484.1
COORDINATES: similar to AA sequence:RefSeq:WP_014811379.1
COORDINATES: protein motif:HMM:TIGR00041.1
GO:0004798 - thymidylate kinase activity [Evidence IEA]
GO:0015949 - nucleobase-containing small molecule interconversion [Evidence IEA]
COORDINATES: protein motif:HMM:NF012241.2
COORDINATES: similar to AA sequence:RefSeq:WP_004695535.1
GO:0016597 - amino acid binding [Evidence IEA]; GO:0004070 - aspartate carbamoyltransferase activity [Evidence IEA]
GO:0006207 - 'de novo' pyrimidine nucleobase biosynthetic process [Evidence IEA]; GO:0006520 - cellular amino acid metabolic process [Evidence IEA]
aspartate carbamoyltransferase catalytic subunit
COORDINATES: similar to AA sequence:RefSeq:WP_011418111.1
COORDINATES: ab initio prediction:GeneMarkS-2+
Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
COORDINATES: protein motif:HMM:NF015948.2
COORDINATES: similar to AA sequence:RefSeq:WP_011416491.1
GO:1904047 - S-adenosyl-L-methionine binding [Evidence IEA]
GO:0006785 - heme B biosynthetic process [Evidence IEA]
COORDINATES: protein motif:HMM:NF019344.2
GO:0005524 - ATP binding [Evidence IEA]; GO:0016887 - ATP hydrolysis activity [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR03156.1
GO:0008150 - biological_process [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR00128.1
GO:0004314 - [acyl-carrier-protein] S-malonyltransferase activity [Evidence IEA]
GO:0006633 - fatty acid biosynthetic process [Evidence IEA]
COORDINATES: protein motif:HMM:NF024880.2
COORDINATES: similar to AA sequence:RefSeq:WP_014809036.1
YifB family Mg chelatase-like AAA ATPase
COORDINATES: protein motif:HMM:NF012301.2
GO:0000160 - phosphorelay signal transduction system [Evidence IEA]
COORDINATES: protein motif:HMM:NF017026.2
GO:0008168 - methyltransferase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF018004.2
COORDINATES: protein motif:HMM:TIGR01141.1
GO:0004400 - histidinol-phosphate transaminase activity [Evidence IEA]
GO:0000105 - histidine biosynthetic process [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR00017.1
GO:0004127 - cytidylate kinase activity [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR00717.1
COORDINATES: protein motif:HMM:TIGR00706.1
GO:0004252 - serine-type endopeptidase activity [Evidence IEA]
GO:0006465 - signal peptide processing [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011417635.1
GO:0061710 - L-threonylcarbamoyladenylate synthase [Evidence IEA]
GO:0006400 - tRNA modification [Evidence IEA]
COORDINATES: protein motif:HMM:NF013700.2
COORDINATES: protein motif:HMM:NF010480.0
GO:0071949 - FAD binding [Evidence IEA]; GO:0008762 - UDP-N-acetylmuramate dehydrogenase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF012933.2
endonuclease III domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_014810786.1
COORDINATES: protein motif:HMM:NF024091.2
GO:0055085 - transmembrane transport [Evidence IEA]
COORDINATES: protein motif:HMM:NF021351.2
COORDINATES: protein motif:HMM:NF025598.2
COORDINATES: similar to AA sequence:RefSeq:WP_014813243.1
COORDINATES: similar to AA sequence:RefSeq:WP_013705823.1
methylenetetrahydrofolate reductase C-terminal domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_015948014.1
COORDINATES: nucleotide motif:Rfam:14.4:RF00174
cobalamin riboswitch; Derived by automated computational analysis using gene prediction method: cmsearch.
COORDINATES: similar to AA sequence:RefSeq:WP_014811607.1
GO:0016616 - oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor [Evidence IEA]
GO:0005975 - carbohydrate metabolic process [Evidence IEA]
COORDINATES: protein motif:HMM:NF014035.2
sulfite exporter TauE/SafE family protein
COORDINATES: protein motif:HMM:NF014003.2
COORDINATES: similar to AA sequence:RefSeq:WP_014809888.1
COORDINATES: protein motif:HMM:NF012774.2
COORDINATES: similar to AA sequence:RefSeq:WP_014811422.1
Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
COORDINATES: protein motif:HMM:NF024949.2
helix-turn-helix transcriptional regulator
COORDINATES: protein motif:HMM:NF033546.1
GO:0004803 - transposase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_013705060.1
COORDINATES: protein motif:HMM:NF012464.2
GO:0003677 - DNA binding [Evidence IEA]; GO:0000150 - DNA strand exchange activity [Evidence IEA]
GO:0006310 - DNA recombination [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_013705065.1
COORDINATES: similar to AA sequence:RefSeq:WP_013705753.1
AbrB/MazE/SpoVT family DNA-binding domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_013705752.1
type II toxin-antitoxin system VapC family toxin
COORDINATES: protein motif:HMM:TIGR01439.1
COORDINATES: protein motif:HMM:TIGR00305.1
GO:0004521 - endoribonuclease activity [Evidence IEA]; GO:0005515 - protein binding [Evidence IEA]
putative toxin-antitoxin system toxin component, PIN family
COORDINATES: protein motif:HMM:NF024861.2
COORDINATES: protein motif:HMM:NF014643.2
type II toxin-antitoxin system Phd/YefM family antitoxin
COORDINATES: similar to AA sequence:RefSeq:WP_015900354.1
COORDINATES: protein motif:HMM:NF012403.2
type II toxin-antitoxin system RelE/ParE family toxin
COORDINATES: protein motif:HMM:NF012801.2
COORDINATES: protein motif:HMM:NF022135.2
COORDINATES: similar to AA sequence:RefSeq:WP_013706202.1
COORDINATES: protein motif:HMM:NF013460.2
cytochrome b/b6 domain-containing protein
COORDINATES: protein motif:HMM:NF024827.2
COORDINATES: protein motif:HMM:NF015987.2
COORDINATES: similar to AA sequence:RefSeq:WP_013706553.1
COORDINATES: similar to AA sequence:RefSeq:WP_014813074.1
COORDINATES: similar to AA sequence:RefSeq:WP_014813082.1
COORDINATES: protein motif:HMM:NF016220.2
GO:0003677 - DNA binding [Evidence IEA]; GO:0004519 - endonuclease activity [Evidence IEA]
GO:0006304 - DNA modification [Evidence IEA]
COORDINATES: protein motif:HMM:NF014442.2
GO:0003677 - DNA binding [Evidence IEA]; GO:0008170 - N-methyltransferase activity [Evidence IEA]
GO:0006306 - DNA methylation [Evidence IEA]
COORDINATES: protein motif:HMM:NF015210.2
class I SAM-dependent DNA methyltransferase
COORDINATES: similar to AA sequence:RefSeq:WP_013706874.1
COORDINATES: protein motif:HMM:NF013752.2
COORDINATES: protein motif:HMM:TIGR00372.1
GO:0004518 - nuclease activity [Evidence IEA]
GO:0043571 - maintenance of CRISPR repeat elements [Evidence IEA]
COORDINATES: protein motif:HMM:NF036560.2
COORDINATES: protein motif:HMM:NF021240.2
COORDINATES: protein motif:HMM:NF014018.2
GO:0003674 - molecular_function [Evidence IEA]
DevR family CRISPR-associated autoregulator
COORDINATES: protein motif:HMM:TIGR01596.1
GO:0004521 - endoribonuclease activity [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR01587.1
GO:0004386 - helicase activity [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR01573.1
COORDINATES: protein motif:HMM:TIGR00287.1
GO:0004520 - endodeoxyribonuclease activity [Evidence IEA]; GO:0046872 - metal ion binding [Evidence IEA]
COORDINATES: protein motif:HMM:NF021636.2
COORDINATES: protein motif:HMM:NF012437.2
COORDINATES: protein motif:HMM:NF024883.2
COORDINATES: protein motif:HMM:TIGR03026.1
UDP-glucose/GDP-mannose dehydrogenase family protein
COORDINATES: protein motif:HMM:NF012695.2
COORDINATES: similar to AA sequence:RefSeq:WP_014808273.1
COORDINATES: protein motif:HMM:NF015737.2
autotransporter domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_013707752.1
COORDINATES: protein motif:HMM:NF017239.2
COORDINATES: protein motif:HMM:NF015983.2
COORDINATES: protein motif:HMM:NF017760.2
COORDINATES: protein motif:HMM:NF021788.2
COORDINATES: protein motif:HMM:NF012706.2
ABC transporter substrate-binding protein
COORDINATES: protein motif:HMM:NF012738.2
dipeptide/oligopeptide/nickel ABC transporter permease/ATP-binding protein
COORDINATES: protein motif:HMM:NF012235.2
dipeptide/oligopeptide/nickel ABC transporter ATP-binding protein
COORDINATES: protein motif:HMM:NF012470.2
COORDINATES: protein motif:HMM:TIGR00539.1
GO:0051989 - coproporphyrinogen dehydrogenase activity [Evidence IEA]
GO:0006779 - porphyrin-containing compound biosynthetic process [Evidence IEA]
COORDINATES: protein motif:HMM:NF040826.1
COORDINATES: protein motif:HMM:NF015168.2
ParB N-terminal domain-containing protein
COORDINATES: protein motif:HMM:NF014460.2
COORDINATES: protein motif:HMM:NF024808.2
COORDINATES: protein motif:HMM:NF015185.2
GO:0022857 - transmembrane transporter activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF024831.2
COORDINATES: similar to AA sequence:RefSeq:WP_014809086.1
GO:0004177 - aminopeptidase activity [Evidence IEA]; GO:0008270 - zinc ion binding [Evidence IEA]
COORDINATES: protein motif:HMM:NF013088.2
GO:0016021 - integral component of membrane [Evidence IEA]; GO:0016020 - membrane [Evidence IEA]
COORDINATES: protein motif:HMM:NF013340.2
YbhB/YbcL family Raf kinase inhibitor-like protein
COORDINATES: protein motif:HMM:TIGR02777.1
COORDINATES: similar to AA sequence:RefSeq:WP_020063210.1
GO:0022625 - cytosolic large ribosomal subunit [Evidence IEA]; GO:0000315 - organellar large ribosomal subunit [Evidence IEA]
GO:0003735 - structural constituent of ribosome [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_002942223.1
COORDINATES: similar to AA sequence:RefSeq:WP_011416250.1
GO:0003942 - N-acetyl-gamma-glutamyl-phosphate reductase activity [Evidence IEA]
GO:0006592 - ornithine biosynthetic process [Evidence IEA]
N-acetyl-gamma-glutamyl-phosphate reductase
COORDINATES: protein motif:HMM:TIGR00071.1
GO:0009982 - pseudouridine synthase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF012955.2
COORDINATES: protein motif:HMM:TIGR00229.1
PAS domain-containing sensor histidine kinase
COORDINATES: protein motif:HMM:NF013465.2
metal ABC transporter substrate-binding protein
COORDINATES: protein motif:HMM:NF013143.2
COORDINATES: similar to AA sequence:RefSeq:WP_013705201.1
COORDINATES: protein motif:HMM:NF025203.2
COORDINATES: similar to AA sequence:RefSeq:WP_011418268.1
sulfide/dihydroorotate dehydrogenase-like FAD/NAD-binding protein
COORDINATES: similar to AA sequence:RefSeq:WP_014810260.1
GO:0004355 - glutamate synthase (NADPH) activity [Evidence IEA]
GO:0006537 - glutamate biosynthetic process [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR04076.1
COORDINATES: protein motif:HMM:NF008035.0
GO:0005515 - protein binding [Evidence IEA]
GO:0006457 - protein folding [Evidence IEA]; GO:0009408 - response to heat [Evidence IEA]
COORDINATES: protein motif:HMM:NF024979.2
GO:0006355 - regulation of DNA-templated transcription [Evidence IEA]
COORDINATES: protein motif:HMM:NF015714.2
COORDINATES: protein motif:HMM:TIGR02605.1
COORDINATES: protein motif:HMM:NF014385.2
COORDINATES: similar to AA sequence:RefSeq:WP_014812001.1
COORDINATES: protein motif:HMM:TIGR01297.1
cation diffusion facilitator family transporter
COORDINATES: protein motif:HMM:NF036887.2
COORDINATES: protein motif:HMM:NF038133.1
choice-of-anchor L domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_014810578.1
COORDINATES: protein motif:HMM:NF024644.2
4Fe-4S dicluster domain-containing protein
COORDINATES: protein motif:HMM:TIGR01702.1
GO:0018492 - carbon-monoxide dehydrogenase (acceptor) activity [Evidence IEA]
anaerobic carbon-monoxide dehydrogenase catalytic subunit
COORDINATES: protein motif:HMM:NF024900.2
2Fe-2S iron-sulfur cluster-binding protein
COORDINATES: similar to AA sequence:RefSeq:WP_008073352.1
GO:0015036 - disulfide oxidoreductase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_014812135.1
GO:0004791 - thioredoxin-disulfide reductase activity [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR03302.1
GO:0019867 - outer membrane [Evidence IEA]
GO:0005198 - structural molecule activity [Evidence IEA]
GO:0065003 - protein-containing complex assembly [Evidence IEA]
outer membrane protein assembly factor BamD
COORDINATES: protein motif:HMM:NF001492.0
GO:0008252 - nucleotidase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF018743.2
COORDINATES: protein motif:HMM:NF004397.1
GO:0008408 - 3'-5' exonuclease activity [Evidence IEA]; GO:0003677 - DNA binding [Evidence IEA]; GO:0003887 - DNA-directed DNA polymerase activity [Evidence IEA]; GO:0003676 - nucleic acid binding [Evidence IEA]
GO:0006261 - DNA-templated DNA replication [Evidence IEA]
COORDINATES: protein motif:HMM:NF018805.2
COORDINATES: protein motif:HMM:NF016648.2
COORDINATES: similar to AA sequence:RefSeq:WP_003690856.1
GO:0004019 - adenylosuccinate synthase activity [Evidence IEA]; GO:0005525 - GTP binding [Evidence IEA]
GO:0006164 - purine nucleotide biosynthetic process [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR00097.1
GO:0008902 - hydroxymethylpyrimidine kinase activity [Evidence IEA]; GO:0008972 - phosphomethylpyrimidine kinase activity [Evidence IEA]
GO:0009228 - thiamine biosynthetic process [Evidence IEA]
bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase
COORDINATES: protein motif:HMM:NF013594.2
GO:0004222 - metalloendopeptidase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF025025.2
COORDINATES: protein motif:HMM:NF013921.2
GO:0003677 - DNA binding [Evidence IEA]; GO:0004803 - transposase activity [Evidence IEA]
GO:0006313 - transposition, DNA-mediated [Evidence IEA]
COORDINATES: protein motif:HMM:NF016895.2
COORDINATES: protein motif:HMM:NF024211.2
COORDINATES: similar to AA sequence:RefSeq:WP_011419055.1
COORDINATES: protein motif:HMM:TIGR02666.1
GO:0051539 - 4 iron, 4 sulfur cluster binding [Evidence IEA]
GO:0006777 - Mo-molybdopterin cofactor biosynthetic process [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR01414.1
autotransporter outer membrane beta-barrel domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_013705155.1
COORDINATES: similar to AA sequence:RefSeq:WP_005936145.1
COORDINATES: protein motif:HMM:NF013828.2
COORDINATES: protein motif:HMM:NF012744.2
COORDINATES: similar to AA sequence:RefSeq:WP_014813234.1
GO:0004609 - phosphatidylserine decarboxylase activity [Evidence IEA]
GO:0008654 - phospholipid biosynthetic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_014813235.1
COORDINATES: protein motif:HMM:NF039989.1
COORDINATES: protein motif:HMM:NF028504.2
COORDINATES: protein motif:HMM:NF040096.1
heavy-metal-associated domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_014808109.1
COORDINATES: similar to AA sequence:RefSeq:WP_014808885.1
GO:0004478 - methionine adenosyltransferase activity [Evidence IEA]
GO:0006556 - S-adenosylmethionine biosynthetic process [Evidence IEA]
COORDINATES: protein motif:HMM:NF023327.2
COORDINATES: similar to AA sequence:RefSeq:WP_014811378.1
sigma-54-dependent Fis family transcriptional regulator
COORDINATES: similar to AA sequence:RefSeq:WP_014811293.1
GO:0008381 - mechanosensitive ion channel activity [Evidence IEA]
GO:0034220 - ion transmembrane transport [Evidence IEA]
large-conductance mechanosensitive channel protein MscL
COORDINATES: protein motif:HMM:TIGR02401.1
GO:0047470 - (1,4)-alpha-D-glucan 1-alpha-D-glucosylmutase activity [Evidence IEA]
GO:0005992 - trehalose biosynthetic process [Evidence IEA]
COORDINATES: protein motif:HMM:NF023478.2
COORDINATES: protein motif:HMM:TIGR02402.1
GO:0016798 - hydrolase activity, acting on glycosyl bonds [Evidence IEA]
malto-oligosyltrehalose trehalohydrolase
COORDINATES: protein motif:HMM:NF017076.2
adenylate/guanylate cyclase domain-containing protein
COORDINATES: protein motif:HMM:NF018095.2
COORDINATES: protein motif:HMM:NF024117.2
COORDINATES: protein motif:HMM:NF012789.2
COORDINATES: protein motif:HMM:NF005146.0
GO:0004084 - branched-chain-amino-acid transaminase activity [Evidence IEA]
GO:0009081 - branched-chain amino acid metabolic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_076612190.1
GO:0015074 - DNA integration [Evidence IEA]
incomplete; partial in the middle of a contig; missing N-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
DDE-type integrase/transposase/recombinase
COORDINATES: protein motif:HMM:NF024120.2
glycosyl hydrolase family 28-related protein
COORDINATES: protein motif:HMM:NF013672.2
GO:0016810 - hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds [Evidence IEA]
polysaccharide deacetylase family protein
COORDINATES: protein motif:HMM:NF012745.2
COORDINATES: protein motif:HMM:NF014051.2
COORDINATES: protein motif:HMM:NF014893.2
GO:0016491 - oxidoreductase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_003113429.1
COORDINATES: similar to AA sequence:RefSeq:WP_001214397.1
COORDINATES: protein motif:HMM:NF014740.2
nucleoside-diphosphate sugar epimerase/dehydratase
COORDINATES: protein motif:HMM:TIGR04152.1
GO:0004197 - cysteine-type endopeptidase activity [Evidence IEA]
GO:0043687 - post-translational protein modification [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR03570.1
COORDINATES: protein motif:HMM:NF024871.2
COORDINATES: protein motif:HMM:NF013227.2
DegT/DnrJ/EryC1/StrS family aminotransferase
COORDINATES: similar to AA sequence:RefSeq:WP_065828827.1
COORDINATES: protein motif:HMM:NF012234.2
COORDINATES: protein motif:HMM:NF013793.2
capsular exopolysaccharide family protein
COORDINATES: protein motif:HMM:NF025179.2
COORDINATES: protein motif:HMM:NF024946.2
COORDINATES: protein motif:HMM:NF014606.2
polysaccharide biosynthesis/export family protein
COORDINATES: similar to AA sequence:RefSeq:WP_014810408.1
COORDINATES: similar to AA sequence:RefSeq:WP_014809206.1
alpha-ketoacid dehydrogenase subunit beta
COORDINATES: protein motif:HMM:TIGR03181.1
GO:0045250 - cytosolic pyruvate dehydrogenase complex [Evidence IEA]
GO:0004739 - pyruvate dehydrogenase (acetyl-transferring) activity [Evidence IEA]
GO:0006086 - acetyl-CoA biosynthetic process from pyruvate [Evidence IEA]
pyruvate dehydrogenase (acetyl-transferring) E1 component subunit alpha
COORDINATES: protein motif:HMM:NF012314.2
COORDINATES: protein motif:HMM:NF005413.0
GO:0003677 - DNA binding [Evidence IEA]; GO:0003899 - DNA-directed 5'-3' RNA polymerase activity [Evidence IEA]; GO:0016987 - sigma factor activity [Evidence IEA]
GO:0006352 - DNA-templated transcription initiation [Evidence IEA]
FliA/WhiG family RNA polymerase sigma factor
COORDINATES: protein motif:HMM:NF022077.2
COORDINATES: protein motif:HMM:NF013188.2
COORDINATES: protein motif:HMM:NF017103.2
COORDINATES: similar to AA sequence:RefSeq:WP_014808956.1
GO:0004817 - cysteine-tRNA ligase activity [Evidence IEA]
GO:0006423 - cysteinyl-tRNA aminoacylation [Evidence IEA]
COORDINATES: protein motif:HMM:NF012760.2
COORDINATES: protein motif:HMM:NF039907.1
COORDINATES: protein motif:HMM:NF028121.2
TRAP transporter TatT component family protein
COORDINATES: similar to AA sequence:RefSeq:WP_014808220.1
COORDINATES: protein motif:HMM:NF016959.2
COORDINATES: protein motif:HMM:NF014633.2
COORDINATES: similar to AA sequence:RefSeq:WP_000441062.1
GO:0009380 - excinuclease repair complex [Evidence IEA]
GO:0005524 - ATP binding [Evidence IEA]; GO:0016887 - ATP hydrolysis activity [Evidence IEA]; GO:0003677 - DNA binding [Evidence IEA]; GO:0016787 - hydrolase activity [Evidence IEA]; GO:0005515 - protein binding [Evidence IEA]
GO:0006289 - nucleotide-excision repair [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_013705344.1
COORDINATES: similar to AA sequence:RefSeq:WP_001262436.1
GO:0004641 - phosphoribosylformylglycinamidine cyclo-ligase activity [Evidence IEA]
GO:0006189 - 'de novo' IMP biosynthetic process [Evidence IEA]; GO:0009152 - purine ribonucleotide biosynthetic process [Evidence IEA]
phosphoribosylformylglycinamidine cyclo-ligase
COORDINATES: protein motif:HMM:NF014101.2
COORDINATES: protein motif:HMM:NF006054.0
GO:0004731 - purine-nucleoside phosphorylase activity [Evidence IEA]
GO:0009116 - nucleoside metabolic process [Evidence IEA]
COORDINATES: protein motif:HMM:NF003740.0
GO:0004553 - hydrolase activity, hydrolyzing O-glycosyl compounds [Evidence IEA]
COORDINATES: protein motif:HMM:NF001273.0
GO:0004590 - orotidine-5'-phosphate decarboxylase activity [Evidence IEA]
GO:0006207 - 'de novo' pyrimidine nucleobase biosynthetic process [Evidence IEA]; GO:0044205 - 'de novo' UMP biosynthetic process [Evidence IEA]
COORDINATES: protein motif:HMM:NF019310.2
COORDINATES: protein motif:HMM:TIGR00023.1
GO:0005886 - plasma membrane [Evidence IEA]
GO:0008374 - O-acyltransferase activity [Evidence IEA]
GO:0006654 - phosphatidic acid biosynthetic process [Evidence IEA]
glycerol-3-phosphate 1-O-acyltransferase PlsY
COORDINATES: protein motif:HMM:NF012780.2
COORDINATES: protein motif:HMM:NF024583.2
incomplete; partial in the middle of a contig; missing C-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: protein motif:HMM:NF014567.2
COORDINATES: protein motif:HMM:NF024798.2
COORDINATES: similar to AA sequence:RefSeq:WP_011416635.1
GO:0009320 - phosphoribosylaminoimidazole carboxylase complex [Evidence IEA]
GO:0004638 - phosphoribosylaminoimidazole carboxylase activity [Evidence IEA]
GO:0009152 - purine ribonucleotide biosynthetic process [Evidence IEA]
5-(carboxyamino)imidazole ribonucleotide mutase
COORDINATES: protein motif:HMM:TIGR00492.1
GO:0008784 - alanine racemase activity [Evidence IEA]
GO:0009252 - peptidoglycan biosynthetic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_014811697.1
COORDINATES: similar to AA sequence:RefSeq:WP_014811696.1
GO:0004814 - arginine-tRNA ligase activity [Evidence IEA]
GO:0006420 - arginyl-tRNA aminoacylation [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011418894.1
GO:0016884 - carbon-nitrogen ligase activity, with glutamine as amido-N-donor [Evidence IEA]; GO:0000107 - imidazoleglycerol-phosphate synthase activity [Evidence IEA]
imidazole glycerol phosphate synthase subunit HisH
COORDINATES: similar to AA sequence:RefSeq:WP_011418893.1
GO:0000107 - imidazoleglycerol-phosphate synthase activity [Evidence IEA]
imidazole glycerol phosphate synthase subunit HisF
COORDINATES: protein motif:HMM:NF005143.0
COORDINATES: protein motif:HMM:NF028228.2
COORDINATES: protein motif:HMM:NF025490.2
COORDINATES: protein motif:HMM:NF014037.2
COORDINATES: protein motif:HMM:NF013491.2
GO:0016772 - transferase activity, transferring phosphorus-containing groups [Evidence IEA]
GO:0016310 - phosphorylation [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_013706726.1
COORDINATES: protein motif:HMM:NF014763.2
COORDINATES: protein motif:HMM:NF012696.2
COORDINATES: similar to AA sequence:RefSeq:WP_011416666.1
GO:0008966 - phosphoglucosamine mutase activity [Evidence IEA]
GO:0009103 - lipopolysaccharide biosynthetic process [Evidence IEA]; GO:0009252 - peptidoglycan biosynthetic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_014810580.1
COORDINATES: similar to AA sequence:RefSeq:WP_013706222.1
COORDINATES: similar to AA sequence:RefSeq:WP_013706221.1
COORDINATES: protein motif:HMM:NF014684.2
branched-chain amino acid ABC transporter permease
COORDINATES: protein motif:HMM:NF019604.2
COORDINATES: similar to AA sequence:RefSeq:WP_013705822.1
GO:0004489 - methylenetetrahydrofolate reductase (NAD(P)H) activity [Evidence IEA]
GO:0006555 - methionine metabolic process [Evidence IEA]
COORDINATES: protein motif:HMM:NF024825.2
COORDINATES: protein motif:HMM:NF017277.2
COORDINATES: protein motif:HMM:TIGR00472.1
GO:0009328 - phenylalanine-tRNA ligase complex [Evidence IEA]
GO:0004826 - phenylalanine-tRNA ligase activity [Evidence IEA]
GO:0006432 - phenylalanyl-tRNA aminoacylation [Evidence IEA]
COORDINATES: protein motif:HMM:NF024803.2
COORDINATES: protein motif:HMM:TIGR01730.1
GO:0005215 - transporter activity [Evidence IEA]
efflux RND transporter periplasmic adaptor subunit
COORDINATES: similar to AA sequence:RefSeq:WP_014809111.1
COORDINATES: similar to AA sequence:RefSeq:WP_013706658.1
COORDINATES: similar to AA sequence:RefSeq:WP_014812184.1
COORDINATES: protein motif:HMM:TIGR01178.1
GO:0000034 - adenine deaminase activity [Evidence IEA]
GO:0006168 - adenine salvage [Evidence IEA]
COORDINATES: protein motif:HMM:NF014476.2
COORDINATES: protein motif:HMM:NF012562.2
COORDINATES: similar to AA sequence:RefSeq:WP_014811363.1
sigma-54 dependent transcriptional regulator
COORDINATES: protein motif:HMM:TIGR00260.1
GO:0004795 - threonine synthase activity [Evidence IEA]
GO:0009088 - threonine biosynthetic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_013705966.1
COORDINATES: protein motif:HMM:NF015956.2
COORDINATES: protein motif:HMM:TIGR00437.1
GO:0015093 - ferrous iron transmembrane transporter activity [Evidence IEA]
GO:0006826 - iron ion transport [Evidence IEA]
COORDINATES: protein motif:HMM:NF021593.2
COORDINATES: similar to AA sequence:RefSeq:WP_013706071.1
COORDINATES: similar to AA sequence:RefSeq:WP_013707170.1
COORDINATES: similar to AA sequence:RefSeq:WP_013707169.1
COORDINATES: similar to AA sequence:RefSeq:WP_013707168.1
MotA/TolQ/ExbB proton channel family protein
COORDINATES: similar to AA sequence:RefSeq:WP_013705349.1
COORDINATES: similar to AA sequence:RefSeq:WP_013707166.1
COORDINATES: similar to AA sequence:RefSeq:WP_013706215.1
COORDINATES: similar to AA sequence:RefSeq:WP_013706214.1
COORDINATES: protein motif:HMM:NF024503.2
COORDINATES: similar to AA sequence:RefSeq:WP_014813165.1
GO:0016611 - iron-iron nitrogenase complex [Evidence IEA]; GO:0016612 - molybdenum-iron nitrogenase complex [Evidence IEA]; GO:0016613 - vanadium-iron nitrogenase complex [Evidence IEA]
GO:0016163 - nitrogenase activity [Evidence IEA]
GO:0009399 - nitrogen fixation [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_014813166.1
COORDINATES: protein motif:HMM:NF012753.2
COORDINATES: similar to AA sequence:RefSeq:WP_014813168.1
GO:0016612 - molybdenum-iron nitrogenase complex [Evidence IEA]
nitrogenase molybdenum-iron protein alpha chain
COORDINATES: similar to AA sequence:RefSeq:WP_014813169.1
nitrogenase molybdenum-iron protein subunit beta
COORDINATES: similar to AA sequence:RefSeq:WP_014813170.1
(2Fe-2S) ferredoxin domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_014813171.1
nitrogenase iron-molybdenum cofactor biosynthesis protein NifE
COORDINATES: similar to AA sequence:RefSeq:WP_014813172.1
COORDINATES: similar to AA sequence:RefSeq:WP_014813173.1
GO:0051539 - 4 iron, 4 sulfur cluster binding [Evidence IEA]; GO:1904047 - S-adenosyl-L-methionine binding [Evidence IEA]
nitrogenase cofactor biosynthesis protein NifB
ATP-binding cassette domain-containing protein
COORDINATES: protein motif:HMM:NF027890.2
COORDINATES: protein motif:HMM:NF013077.2
COORDINATES: similar to AA sequence:RefSeq:WP_011417352.1
COORDINATES: protein motif:HMM:NF013618.2
lytic transglycosylase domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_013705069.1
COORDINATES: similar to AA sequence:RefSeq:WP_014810179.1
COORDINATES: similar to AA sequence:RefSeq:WP_018054613.1
GO:0004831 - tyrosine-tRNA ligase activity [Evidence IEA]
GO:0006437 - tyrosyl-tRNA aminoacylation [Evidence IEA]
COORDINATES: protein motif:HMM:NF016190.2
COORDINATES: protein motif:HMM:NF013528.2
COORDINATES: protein motif:HMM:NF001399.0
GO:0009009 - site-specific recombinase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011418581.1
COORDINATES: similar to AA sequence:RefSeq:WP_014811775.1
COORDINATES: similar to AA sequence:RefSeq:WP_011418580.1
GO:0016149 - translation release factor activity, codon specific [Evidence IEA]
GO:0006415 - translational termination [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR00536.1
GO:0008757 - S-adenosylmethionine-dependent methyltransferase activity [Evidence IEA]
GO:0018364 - peptidyl-glutamine methylation [Evidence IEA]; GO:0006412 - translation [Evidence IEA]
peptide chain release factor N(5)-glutamine methyltransferase
COORDINATES: protein motif:HMM:NF005305.0
GO:0003824 - catalytic activity [Evidence IEA]; GO:0030170 - pyridoxal phosphate binding [Evidence IEA]
GO:0009058 - biosynthetic process [Evidence IEA]
pyridoxal phosphate-dependent aminotransferase
COORDINATES: protein motif:HMM:TIGR00040.1
COORDINATES: protein motif:HMM:NF019498.2
COORDINATES: similar to AA sequence:RefSeq:WP_014810347.1
COORDINATES: protein motif:HMM:TIGR00268.1
GO:0016783 - sulfurtransferase activity [Evidence IEA]
ATP-dependent sacrificial sulfur transferase LarE
COORDINATES: protein motif:HMM:NF014610.2
COORDINATES: protein motif:HMM:NF013742.2
COORDINATES: protein motif:HMM:NF013704.2
COORDINATES: protein motif:HMM:NF020650.2
COORDINATES: protein motif:HMM:NF020123.2
COORDINATES: protein motif:HMM:NF012791.2
COORDINATES: similar to AA sequence:RefSeq:WP_014811377.1
GO:0043565 - sequence-specific DNA binding [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011416493.1
COORDINATES: similar to AA sequence:RefSeq:WP_011416492.1
GO:0003824 - catalytic activity [Evidence IEA]; GO:0046872 - metal ion binding [Evidence IEA]; GO:0004655 - porphobilinogen synthase activity [Evidence IEA]
GO:0033014 - tetrapyrrole biosynthetic process [Evidence IEA]
COORDINATES: protein motif:HMM:NF013438.2
COORDINATES: protein motif:HMM:NF016356.2
DUF523 and DUF1722 domain-containing protein
COORDINATES: protein motif:HMM:NF012478.2
COORDINATES: protein motif:HMM:TIGR00217.1
GO:0004134 - 4-alpha-glucanotransferase activity [Evidence IEA]
GO:0005980 - glycogen catabolic process [Evidence IEA]
COORDINATES: protein motif:HMM:NF026052.2
GO:0003824 - catalytic activity [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR00104.1
tRNA (N6-threonylcarbamoyladenosine(37)-N6)-methyltransferase TrmO
COORDINATES: similar to AA sequence:RefSeq:WP_015585405.1
GO:0004418 - hydroxymethylbilane synthase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF025925.2
COORDINATES: protein motif:HMM:NF024910.2
COORDINATES: protein motif:HMM:TIGR01507.1
GO:0051007 - squalene-hopene cyclase activity [Evidence IEA]
GO:0019746 - hopanoid biosynthetic process [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR03466.1
NAD-dependent epimerase/dehydratase family protein
COORDINATES: protein motif:HMM:TIGR03470.1
GO:0003824 - catalytic activity [Evidence IEA]; GO:0051536 - iron-sulfur cluster binding [Evidence IEA]
COORDINATES: protein motif:HMM:NF013283.2
COORDINATES: protein motif:HMM:NF014425.2
COORDINATES: protein motif:HMM:NF013827.2
rhomboid family intramembrane serine protease
COORDINATES: protein motif:HMM:TIGR00115.1
GO:0005854 - nascent polypeptide-associated complex [Evidence IEA]
GO:0003755 - peptidyl-prolyl cis-trans isomerase activity [Evidence IEA]; GO:0051082 - unfolded protein binding [Evidence IEA]
GO:0051083 - 'de novo' cotranslational protein folding [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_003412648.1
GO:0009368 - endopeptidase Clp complex [Evidence IEA]
GO:0004176 - ATP-dependent peptidase activity [Evidence IEA]; GO:0004252 - serine-type endopeptidase activity [Evidence IEA]
ATP-dependent Clp endopeptidase proteolytic subunit ClpP
COORDINATES: similar to AA sequence:RefSeq:WP_011417437.1
GO:0005524 - ATP binding [Evidence IEA]; GO:0016887 - ATP hydrolysis activity [Evidence IEA]; GO:0046983 - protein dimerization activity [Evidence IEA]; GO:0008270 - zinc ion binding [Evidence IEA]
ATP-dependent Clp protease ATP-binding subunit ClpX
COORDINATES: similar to AA sequence:RefSeq:WP_011417438.1
GO:0016887 - ATP hydrolysis activity [Evidence IEA]; GO:0004176 - ATP-dependent peptidase activity [Evidence IEA]; GO:0043565 - sequence-specific DNA binding [Evidence IEA]; GO:0004252 - serine-type endopeptidase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF016232.2
putative DNA binding domain-containing protein
COORDINATES: protein motif:HMM:NF013561.2
ribbon-helix-helix domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_014810442.1
GO:0050660 - flavin adenine dinucleotide binding [Evidence IEA]
GO:0008033 - tRNA processing [Evidence IEA]; GO:0002098 - tRNA wobble uridine modification [Evidence IEA]
tRNA uridine-5-carboxymethylaminomethyl(34) synthesis enzyme MnmG
COORDINATES: protein motif:HMM:NF021148.2
COORDINATES: similar to AA sequence:RefSeq:WP_013706236.1
COORDINATES: protein motif:HMM:NF025885.2
HAMP domain-containing sensor histidine kinase
COORDINATES: protein motif:HMM:NF012298.2
GO:0004672 - protein kinase activity [Evidence IEA]
GO:0006468 - protein phosphorylation [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_016290536.1
COORDINATES: similar to AA sequence:RefSeq:WP_003232615.1
COORDINATES: similar to AA sequence:RefSeq:WP_013706893.1
GO:0004315 - 3-oxoacyl-[acyl-carrier-protein] synthase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF012711.2
COORDINATES: protein motif:HMM:TIGR01379.1
GO:0009030 - thiamine-phosphate kinase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_014808992.1
GO:0004550 - nucleoside diphosphate kinase activity [Evidence IEA]
GO:0006165 - nucleoside diphosphate phosphorylation [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011417795.1
GO:0003746 - translation elongation factor activity [Evidence IEA]
GO:0006414 - translational elongation [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_013705817.1
COORDINATES: protein motif:HMM:NF013425.2
COORDINATES: similar to AA sequence:RefSeq:WP_014811979.1
COORDINATES: similar to AA sequence:RefSeq:WP_014811978.1
COORDINATES: similar to AA sequence:RefSeq:WP_014811977.1
YedE family putative selenium transporter
COORDINATES: similar to AA sequence:RefSeq:WP_015725381.1
GO:0004756 - selenide, water dikinase activity [Evidence IEA]
GO:0001887 - selenium compound metabolic process [Evidence IEA]
COORDINATES: protein motif:HMM:NF024765.2
COORDINATES: protein motif:HMM:NF014670.2
COORDINATES: protein motif:HMM:TIGR03594.1
GO:0005525 - GTP binding [Evidence IEA]; GO:0003924 - GTPase activity [Evidence IEA]; GO:0043022 - ribosome binding [Evidence IEA]
GO:0042254 - ribosome biogenesis [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR00225.1
COORDINATES: protein motif:HMM:NF015531.2
COORDINATES: protein motif:HMM:TIGR00135.1
GO:0030956 - glutamyl-tRNA(Gln) amidotransferase complex [Evidence IEA]
GO:0050567 - glutaminyl-tRNA synthase (glutamine-hydrolyzing) activity [Evidence IEA]
GO:0006424 - glutamyl-tRNA aminoacylation [Evidence IEA]
Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatC
COORDINATES: similar to AA sequence:RefSeq:WP_014810747.1
Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatA
COORDINATES: protein motif:HMM:NF014703.2
GO:0030288 - outer membrane-bounded periplasmic space [Evidence IEA]
GO:0050380 - undecaprenyl-diphosphatase activity [Evidence IEA]
GO:0009252 - peptidoglycan biosynthetic process [Evidence IEA]; GO:0046677 - response to antibiotic [Evidence IEA]
COORDINATES: protein motif:HMM:NF018076.2
50S ribosomal protein L11 methyltransferase
COORDINATES: similar to AA sequence:RefSeq:WP_011416899.1
COORDINATES: similar to AA sequence:RefSeq:WP_013706470.1
COORDINATES: protein motif:HMM:NF014685.2
GO:0008818 - cobalamin 5'-phosphate synthase activity [Evidence IEA]
GO:0009236 - cobalamin biosynthetic process [Evidence IEA]
adenosylcobinamide-GDP ribazoletransferase
COORDINATES: similar to AA sequence:RefSeq:WP_014813248.1
GO:0008939 - nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase activity [Evidence IEA]
nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase
COORDINATES: protein motif:HMM:NF004469.0
GO:0043752 - adenosylcobinamide kinase activity [Evidence IEA]; GO:0000166 - nucleotide binding [Evidence IEA]
bifunctional adenosylcobinamide kinase/adenosylcobinamide-phosphate guanylyltransferase
COORDINATES: protein motif:HMM:NF004637.0
GO:0008817 - cob(I)yrinic acid a,c-diamide adenosyltransferase activity [Evidence IEA]
cob(I)yrinic acid a,c-diamide adenosyltransferase
COORDINATES: similar to AA sequence:RefSeq:WP_014809737.1
COORDINATES: similar to AA sequence:RefSeq:WP_014811570.1
GO:1903826 - L-arginine transmembrane transport [Evidence IEA]; GO:0015819 - lysine transport [Evidence IEA]; GO:0015822 - ornithine transport [Evidence IEA]
methylmalonyl Co-A mutase-associated GTPase MeaB
COORDINATES: protein motif:HMM:NF012387.2
COORDINATES: protein motif:HMM:TIGR00757.1
COORDINATES: similar to AA sequence:RefSeq:WP_011418871.1
GO:0004160 - dihydroxy-acid dehydratase activity [Evidence IEA]
GO:0009097 - isoleucine biosynthetic process [Evidence IEA]; GO:0009099 - valine biosynthetic process [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR00663.1
GO:0009360 - DNA polymerase III complex [Evidence IEA]
GO:0003887 - DNA-directed DNA polymerase activity [Evidence IEA]
GO:0006260 - DNA replication [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011415917.1
GO:0009330 - DNA topoisomerase type II (double strand cut, ATP-hydrolyzing) complex [Evidence IEA]
GO:0003918 - DNA topoisomerase type II (double strand cut, ATP-hydrolyzing) activity [Evidence IEA]
GO:0006265 - DNA topological change [Evidence IEA]
DNA topoisomerase (ATP-hydrolyzing) subunit B
COORDINATES: protein motif:HMM:NF019265.2
COORDINATES: protein motif:HMM:NF039842.1
COORDINATES: similar to AA sequence:RefSeq:WP_011418715.1
COORDINATES: protein motif:HMM:NF014564.2
COORDINATES: protein motif:HMM:NF013871.2
COORDINATES: protein motif:HMM:NF012804.2
class II aldolase/adducin family protein
COORDINATES: protein motif:HMM:NF024685.2
COORDINATES: protein motif:HMM:TIGR01081.1
GO:0016881 - acid-amino acid ligase activity [Evidence IEA]
UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl- meso-diaminopimelate ligase
COORDINATES: protein motif:HMM:NF012371.2
COORDINATES: protein motif:HMM:NF002378.0
COORDINATES: protein motif:HMM:NF014069.2
COORDINATES: similar to AA sequence:RefSeq:WP_014809490.1
GO:0009678 - pyrophosphate hydrolysis-driven proton transmembrane transporter activity [Evidence IEA]
GO:1902600 - proton transmembrane transport [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR04407.1
GO:0015221 - lipopolysaccharide transmembrane transporter activity [Evidence IEA]
GO:0015920 - lipopolysaccharide transport [Evidence IEA]
LPS export ABC transporter permease LptF
COORDINATES: protein motif:HMM:NF024587.2
COORDINATES: protein motif:HMM:TIGR03717.1
COORDINATES: similar to AA sequence:RefSeq:WP_011418948.1
GO:0004044 - amidophosphoribosyltransferase activity [Evidence IEA]
methyltransferase domain-containing protein
COORDINATES: protein motif:HMM:NF024109.2
COORDINATES: protein motif:HMM:TIGR00858.1
GO:0008710 - 8-amino-7-oxononanoate synthase activity [Evidence IEA]
GO:0009102 - biotin biosynthetic process [Evidence IEA]
COORDINATES: protein motif:HMM:NF024891.2
GO:0004141 - dethiobiotin synthase activity [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR00433.2
GO:0051537 - 2 iron, 2 sulfur cluster binding [Evidence IEA]; GO:0051539 - 4 iron, 4 sulfur cluster binding [Evidence IEA]; GO:0004076 - biotin synthase activity [Evidence IEA]; GO:1904047 - S-adenosyl-L-methionine binding [Evidence IEA]
COORDINATES: protein motif:HMM:NF015782.2
COORDINATES: protein motif:HMM:NF019415.2
COORDINATES: protein motif:HMM:NF024139.2
helix-turn-helix domain-containing protein
COORDINATES: protein motif:HMM:NF024872.2
COORDINATES: protein motif:HMM:NF013930.2
GO:0003677 - DNA binding [Evidence IEA]; GO:0003896 - DNA primase activity [Evidence IEA]; GO:0008270 - zinc ion binding [Evidence IEA]
CHC2 zinc finger domain-containing protein
COORDINATES: protein motif:HMM:NF013744.2
COORDINATES: protein motif:HMM:NF019282.2
COORDINATES: protein motif:HMM:NF014752.2
COORDINATES: protein motif:HMM:NF012798.2
COORDINATES: protein motif:HMM:NF013974.2
GO:0003824 - catalytic activity [Evidence IEA]; GO:0030976 - thiamine pyrophosphate binding [Evidence IEA]
COORDINATES: protein motif:HMM:NF039818.1
COORDINATES: protein motif:HMM:NF014657.2
COORDINATES: similar to AA sequence:RefSeq:WP_011702823.1
COORDINATES: protein motif:HMM:NF012656.2
GO:0016627 - oxidoreductase activity, acting on the CH-CH group of donors [Evidence IEA]
COORDINATES: protein motif:HMM:NF013200.2
electron transfer flavoprotein subunit beta/FixA family protein
electron transfer flavoprotein subunit alpha
COORDINATES: similar to AA sequence:RefSeq:WP_002442508.1
GO:0004316 - 3-oxoacyl-[acyl-carrier-protein] reductase (NADPH) activity [Evidence IEA]
3-oxoacyl-[acyl-carrier-protein] reductase
COORDINATES: similar to AA sequence:RefSeq:WP_000786062.1
COORDINATES: similar to AA sequence:RefSeq:WP_011416102.1
COORDINATES: similar to AA sequence:RefSeq:WP_014808909.1
GO:0004751 - ribose-5-phosphate isomerase activity [Evidence IEA]
GO:0009052 - pentose-phosphate shunt, non-oxidative branch [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011416100.1
COORDINATES: similar to AA sequence:RefSeq:WP_011416098.1
GO:0140110 - transcription regulator activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF017020.2
COORDINATES: protein motif:HMM:NF037100.2
nucleotidyltransferase domain-containing protein
COORDINATES: protein motif:HMM:TIGR00326.1
GO:0008703 - 5-amino-6-(5-phosphoribosylamino)uracil reductase activity [Evidence IEA]; GO:0008835 - diaminohydroxyphosphoribosylaminopyrimidine deaminase activity [Evidence IEA]
bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase RibD
COORDINATES: similar to AA sequence:RefSeq:WP_011417377.1
GO:0004821 - histidine-tRNA ligase activity [Evidence IEA]
GO:0006427 - histidyl-tRNA aminoacylation [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_014809123.1
GO:0004812 - aminoacyl-tRNA ligase activity [Evidence IEA]; GO:0005524 - ATP binding [Evidence IEA]; GO:0016874 - ligase activity [Evidence IEA]; GO:0000166 - nucleotide binding [Evidence IEA]
GO:0006418 - tRNA aminoacylation for protein translation [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011417375.1
COORDINATES: similar to AA sequence:RefSeq:WP_014809918.1
COORDINATES: protein motif:HMM:NF013670.2
COORDINATES: similar to AA sequence:RefSeq:WP_014810781.1
COORDINATES: similar to AA sequence:RefSeq:WP_014811815.1
cobalamin B12-binding domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_014808426.1
GO:0004743 - pyruvate kinase activity [Evidence IEA]
GO:0006096 - glycolytic process [Evidence IEA]
phosphate ABC transporter ATP-binding protein
COORDINATES: protein motif:HMM:TIGR02136.1
phosphate ABC transporter substrate-binding protein
COORDINATES: protein motif:HMM:NF024921.2
substrate-binding domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_013705352.1
COORDINATES: similar to AA sequence:RefSeq:WP_013705351.1
COORDINATES: protein motif:HMM:NF013219.2
COORDINATES: protein motif:HMM:NF013648.2
COORDINATES: protein motif:HMM:TIGR00065.1
GO:0003924 - GTPase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_014812441.1
GO:0005524 - ATP binding [Evidence IEA]; GO:0005515 - protein binding [Evidence IEA]
GO:0043093 - FtsZ-dependent cytokinesis [Evidence IEA]
COORDINATES: protein motif:HMM:NF015739.2
FtsQ-type POTRA domain-containing protein
COORDINATES: protein motif:HMM:TIGR01082.1
GO:0008763 - UDP-N-acetylmuramate-L-alanine ligase activity [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR01133.1
GO:0050511 - undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase activity [Evidence IEA]
undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase
COORDINATES: protein motif:HMM:TIGR02614.1
GO:0016021 - integral component of membrane [Evidence IEA]
GO:0051301 - cell division [Evidence IEA]; GO:0009252 - peptidoglycan biosynthetic process [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR01087.1
GO:0008764 - UDP-N-acetylmuramoylalanine-D-glutamate ligase activity [Evidence IEA]
UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase
COORDINATES: similar to AA sequence:RefSeq:WP_011416591.1
GO:0008963 - phospho-N-acetylmuramoyl-pentapeptide-transferase activity [Evidence IEA]
phospho-N-acetylmuramoyl-pentapeptide- transferase
COORDINATES: protein motif:HMM:TIGR01143.1
UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D- alanine ligase
COORDINATES: protein motif:HMM:NF001126.0
GO:0005524 - ATP binding [Evidence IEA]; GO:0016874 - ligase activity [Evidence IEA]
GO:0009058 - biosynthetic process [Evidence IEA]; GO:0051301 - cell division [Evidence IEA]; GO:0008360 - regulation of cell shape [Evidence IEA]
UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2, 6-diaminopimelate ligase
COORDINATES: protein motif:HMM:NF013100.2
COORDINATES: protein motif:HMM:NF016860.2
COORDINATES: protein motif:HMM:NF013919.2
GO:0016434 - rRNA (cytosine) methyltransferase activity [Evidence IEA]
16S rRNA (cytosine(1402)-N(4))-methyltransferase RsmH
COORDINATES: protein motif:HMM:TIGR00242.1
GO:0051302 - regulation of cell division [Evidence IEA]
division/cell wall cluster transcriptional repressor MraZ
COORDINATES: protein motif:HMM:TIGR00510.1
GO:0051539 - 4 iron, 4 sulfur cluster binding [Evidence IEA]; GO:0016992 - lipoate synthase activity [Evidence IEA]; GO:1904047 - S-adenosyl-L-methionine binding [Evidence IEA]
GO:0009107 - lipoate biosynthetic process [Evidence IEA]
COORDINATES: protein motif:HMM:NF013727.2
COORDINATES: protein motif:HMM:NF021602.2
GO:0016779 - nucleotidyltransferase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF014043.2
COORDINATES: protein motif:HMM:TIGR02594.1
COORDINATES: protein motif:HMM:NF017885.2
COORDINATES: protein motif:HMM:NF033559.1
COORDINATES: protein motif:HMM:NF039904.1
COORDINATES: protein motif:HMM:NF024976.2
type I restriction enzyme HsdR N-terminal domain-containing protein
COORDINATES: protein motif:HMM:NF008113.2
GO:0008251 - tRNA-specific adenosine deaminase activity [Evidence IEA]; GO:0008270 - zinc ion binding [Evidence IEA]
GO:0002100 - tRNA wobble adenosine to inosine editing [Evidence IEA]
COORDINATES: protein motif:HMM:NF014081.2
COORDINATES: protein motif:HMM:NF016223.2
flagellar biosynthesis anti-sigma factor FlgM
COORDINATES: similar to AA sequence:RefSeq:WP_014808985.1
TusE/DsrC/DsvC family sulfur relay protein
COORDINATES: protein motif:HMM:NF014774.2
COORDINATES: protein motif:HMM:NF014910.2
GO:0050660 - flavin adenine dinucleotide binding [Evidence IEA]; GO:0016491 - oxidoreductase activity [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR01511.1
GO:0042625 - ATPase-coupled ion transmembrane transporter activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011415961.1
COORDINATES: similar to AA sequence:RefSeq:WP_014810537.1
COORDINATES: similar to AA sequence:RefSeq:WP_014812607.1
COORDINATES: similar to AA sequence:RefSeq:WP_011415958.1
COORDINATES: protein motif:HMM:NF012497.2
GO:0003866 - 3-phosphoshikimate 1-carboxyvinyltransferase activity [Evidence IEA]
GO:0009423 - chorismate biosynthetic process [Evidence IEA]
3-phosphoshikimate 1-carboxyvinyltransferase
COORDINATES: protein motif:HMM:NF001319.0
GO:0004764 - shikimate 3-dehydrogenase (NADP+) activity [Evidence IEA]
GO:0019632 - shikimate metabolic process [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR01093.1
GO:0003855 - 3-dehydroquinate dehydratase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF008865.0
GO:0004664 - prephenate dehydratase activity [Evidence IEA]
GO:0009094 - L-phenylalanine biosynthetic process [Evidence IEA]
COORDINATES: protein motif:HMM:NF002627.0
COORDINATES: protein motif:HMM:NF005556.0
2-amino-3,7-dideoxy-D-threo-hept-6-ulosonate synthase
COORDINATES: similar to AA sequence:RefSeq:WP_013707064.1
COORDINATES: similar to AA sequence:RefSeq:WP_013706595.1
COORDINATES: protein motif:HMM:TIGR00595.1
GO:0005658 - alpha DNA polymerase:primase complex [Evidence IEA]
GO:0003678 - DNA helicase activity [Evidence IEA]; GO:0003688 - DNA replication origin binding [Evidence IEA]; GO:0016818 - hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011417512.1
GO:0003938 - IMP dehydrogenase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF013087.2
GO:0008171 - O-methyltransferase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF012869.2
COORDINATES: protein motif:HMM:TIGR01783.1
COORDINATES: protein motif:HMM:NF015998.2
COORDINATES: protein motif:HMM:NF024590.2
COORDINATES: protein motif:HMM:NF024581.2
COORDINATES: similar to AA sequence:RefSeq:WP_013705815.1
CoB--CoM heterodisulfide reductase iron-sulfur subunit B family protein
COORDINATES: similar to AA sequence:RefSeq:WP_014812744.1
COORDINATES: similar to AA sequence:RefSeq:WP_014808320.1
GO:0006094 - gluconeogenesis [Evidence IEA]; GO:0019682 - glyceraldehyde-3-phosphate metabolic process [Evidence IEA]; GO:0006096 - glycolytic process [Evidence IEA]
type I glyceraldehyde-3-phosphate dehydrogenase
COORDINATES: similar to AA sequence:RefSeq:WP_011416627.1
GO:0006166 - purine ribonucleoside salvage [Evidence IEA]
COORDINATES: protein motif:HMM:NF024833.2
COORDINATES: protein motif:HMM:NF017206.2
COORDINATES: protein motif:HMM:NF010588.0
GO:0005524 - ATP binding [Evidence IEA]; GO:0003952 - NAD+ synthase (glutamine-hydrolyzing) activity [Evidence IEA]
GO:0009435 - NAD biosynthetic process [Evidence IEA]
COORDINATES: protein motif:HMM:NF024586.2
COORDINATES: similar to AA sequence:RefSeq:WP_014811773.1
GO:0005524 - ATP binding [Evidence IEA]; GO:0008186 - ATP-dependent activity, acting on RNA [Evidence IEA]; GO:0003723 - RNA binding [Evidence IEA]
GO:0006353 - DNA-templated transcription termination [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR00152.1
GO:0004140 - dephospho-CoA kinase activity [Evidence IEA]
GO:0015937 - coenzyme A biosynthetic process [Evidence IEA]
Dephospho-CoA kinase (CoaE) performs the final step in coenzyme A biosynthesis; Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: similar to AA sequence:RefSeq:WP_011418584.1
COORDINATES: similar to AA sequence:RefSeq:WP_011417865.1
COORDINATES: protein motif:HMM:NF014602.2
COORDINATES: protein motif:HMM:TIGR00237.1
GO:0009318 - exodeoxyribonuclease VII complex [Evidence IEA]
GO:0008855 - exodeoxyribonuclease VII activity [Evidence IEA]
GO:0006308 - DNA catabolic process [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR01280.1
COORDINATES: similar to AA sequence:RefSeq:WP_011417686.1
COORDINATES: similar to AA sequence:RefSeq:WP_014809352.1
GO:0008661 - 1-deoxy-D-xylulose-5-phosphate synthase activity [Evidence IEA]
GO:0009240 - isopentenyl diphosphate biosynthetic process [Evidence IEA]; GO:0008615 - pyridoxine biosynthetic process [Evidence IEA]; GO:0009228 - thiamine biosynthetic process [Evidence IEA]
COORDINATES: protein motif:HMM:NF019844.2
COORDINATES: protein motif:HMM:TIGR00765.1
YihY/virulence factor BrkB family protein
COORDINATES: protein motif:HMM:NF018899.2
COORDINATES: protein motif:HMM:NF016260.2
GO:0005887 - integral component of plasma membrane [Evidence IEA]
GO:0009306 - protein secretion [Evidence IEA]
translocation/assembly module TamB domain-containing protein
COORDINATES: protein motif:HMM:NF024355.2
COORDINATES: protein motif:HMM:NF012264.2
COORDINATES: protein motif:HMM:NF014886.2
COORDINATES: similar to AA sequence:RefSeq:WP_014811851.1
GO:0046523 - S-methyl-5-thioribose-1-phosphate isomerase activity [Evidence IEA]
GO:0019509 - L-methionine salvage from methylthioadenosine [Evidence IEA]
S-methyl-5-thioribose-1-phosphate isomerase
COORDINATES: protein motif:HMM:NF015679.2
GO:0016740 - transferase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_014810529.1
COORDINATES: similar to AA sequence:RefSeq:WP_014810528.1
COORDINATES: protein motif:HMM:NF012257.2
cyclic nucleotide-binding domain-containing protein
COORDINATES: protein motif:HMM:NF014325.2
COORDINATES: protein motif:HMM:TIGR00336.1
GO:0004588 - orotate phosphoribosyltransferase activity [Evidence IEA]
GO:0009220 - pyrimidine ribonucleotide biosynthetic process [Evidence IEA]
COORDINATES: protein motif:HMM:NF014176.2
COORDINATES: protein motif:HMM:NF013411.2
GO:0008616 - queuosine biosynthetic process [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR01490.1
GO:0016787 - hydrolase activity [Evidence IEA]
GO:0008152 - metabolic process [Evidence IEA]
COORDINATES: protein motif:HMM:NF013250.2
CDP-alcohol phosphatidyltransferase family protein
COORDINATES: similar to AA sequence:RefSeq:WP_011416857.1
COORDINATES: similar to AA sequence:RefSeq:WP_013705334.1
COORDINATES: protein motif:HMM:TIGR01230.1
GO:0008783 - agmatinase activity [Evidence IEA]
GO:0008295 - spermidine biosynthetic process [Evidence IEA]
COORDINATES: protein motif:HMM:NF014027.2
COORDINATES: protein motif:HMM:NF021492.2
COORDINATES: protein motif:HMM:TIGR00150.1
GO:0016887 - ATP hydrolysis activity [Evidence IEA]
tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex ATPase subunit type 1 TsaE
COORDINATES: protein motif:HMM:TIGR00196.1
GO:0052855 - ADP-dependent NAD(P)H-hydrate dehydratase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF038018.1
quinone-interacting membrane-bound oxidoreductase complex subunit QmoC
COORDINATES: similar to AA sequence:RefSeq:WP_014811625.1
COORDINATES: similar to AA sequence:RefSeq:WP_015939131.1
incomplete; partial in the middle of a contig; missing N-terminus and C-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: similar to AA sequence:RefSeq:WP_013822176.1
GO:0009973 - adenylyl-sulfate reductase activity [Evidence IEA]
GO:0019420 - dissimilatory sulfate reduction [Evidence IEA]; GO:0019424 - sulfide oxidation, using siroheme sulfite reductase [Evidence IEA]
adenylyl-sulfate reductase subunit alpha
COORDINATES: protein motif:HMM:TIGR02060.1
COORDINATES: protein motif:HMM:NF003166.0
GO:0004781 - sulfate adenylyltransferase (ATP) activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_014809130.1
GO:0030170 - pyridoxal phosphate binding [Evidence IEA]; GO:0004834 - tryptophan synthase activity [Evidence IEA]
GO:0000162 - tryptophan biosynthetic process [Evidence IEA]; GO:0006568 - tryptophan metabolic process [Evidence IEA]
TrpB-like pyridoxal phosphate-dependent enzyme
COORDINATES: protein motif:HMM:NF014058.2
COORDINATES: similar to AA sequence:RefSeq:WP_011228915.1
COORDINATES: similar to AA sequence:RefSeq:WP_016290939.1
GO:0048501 - signal recognition particle, plasma membrane targeting [Evidence IEA]
GO:0003924 - GTPase activity [Evidence IEA]; GO:0005048 - signal sequence binding [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_014808263.1
GO:0022627 - cytosolic small ribosomal subunit [Evidence IEA]; GO:0000314 - organellar small ribosomal subunit [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_014808264.1
COORDINATES: protein motif:HMM:TIGR02273.1
GO:0006364 - rRNA processing [Evidence IEA]
Essential for efficient processing of 16S rRNA; Essential for efficient processing of 16S rRNA; Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: protein motif:HMM:NF013874.2
GO:0052906 - tRNA (guanine(37)-N(1))-methyltransferase activity [Evidence IEA]
GO:0008033 - tRNA processing [Evidence IEA]
tRNA (guanosine(37)-N1)-methyltransferase TrmD
COORDINATES: similar to AA sequence:RefSeq:WP_005606730.1
GO:0022625 - cytosolic large ribosomal subunit [Evidence IEA]; GO:0000311 - plastid large ribosomal subunit [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011418221.1
GO:0003723 - RNA binding [Evidence IEA]; GO:0004523 - RNA-DNA hybrid ribonuclease activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF009154.0
GO:0004518 - nuclease activity [Evidence IEA]; GO:0003676 - nucleic acid binding [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR00096.1
GO:0008649 - rRNA methyltransferase activity [Evidence IEA]; GO:0008757 - S-adenosylmethionine-dependent methyltransferase activity [Evidence IEA]
GO:0000451 - rRNA 2'-O-methylation [Evidence IEA]
16S rRNA (cytidine(1402)-2'-O)-methyltransferase
COORDINATES: protein motif:HMM:TIGR01003.1
COORDINATES: protein motif:HMM:TIGR01417.1
GO:0008965 - phosphoenolpyruvate-protein phosphotransferase activity [Evidence IEA]
GO:0009401 - phosphoenolpyruvate-dependent sugar phosphotransferase system [Evidence IEA]; GO:0006808 - regulation of nitrogen utilization [Evidence IEA]
phosphoenolpyruvate--protein phosphotransferase
COORDINATES: similar to AA sequence:RefSeq:WP_001123905.1
COORDINATES: protein motif:HMM:NF037202.2
COORDINATES: protein motif:HMM:NF015639.2
COORDINATES: protein motif:HMM:NF012382.2
PLP-dependent aminotransferase family protein
COORDINATES: similar to AA sequence:RefSeq:WP_013705067.1
COORDINATES: similar to AA sequence:RefSeq:WP_013705066.1
COORDINATES: protein motif:HMM:NF024981.2
COORDINATES: protein motif:HMM:NF024634.2
COORDINATES: protein motif:HMM:NF016310.2
GO:0005524 - ATP binding [Evidence IEA]; GO:0008134 - transcription factor binding [Evidence IEA]
sigma 54-interacting transcriptional regulator
COORDINATES: similar to AA sequence:RefSeq:WP_013707118.1
COORDINATES: nucleotide motif:Rfam:14.4:RF01051
cyclic di-GMP riboswitch class I; Derived by automated computational analysis using gene prediction method: cmsearch.
COORDINATES: protein motif:HMM:TIGR02913.1
COORDINATES: protein motif:HMM:NF019242.2
COORDINATES: protein motif:HMM:NF024792.2
pilus assembly protein TadG-related protein
COORDINATES: protein motif:HMM:NF024824.2
COORDINATES: protein motif:HMM:NF012694.2
type II secretion system F family protein
COORDINATES: similar to AA sequence:RefSeq:WP_011417197.1
COORDINATES: protein motif:HMM:NF012485.2
pilus assembly protein N-terminal domain-containing protein
COORDINATES: protein motif:HMM:TIGR03177.1
COORDINATES: protein motif:HMM:NF019428.2
TadE/TadG family type IV pilus assembly protein
COORDINATES: protein motif:HMM:NF013632.2
COORDINATES: protein motif:HMM:NF016828.2
GO:0003700 - DNA-binding transcription factor activity [Evidence IEA]; GO:0043565 - sequence-specific DNA binding [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR02533.1
GO:0015627 - type II protein secretion system complex [Evidence IEA]
GO:0015628 - protein secretion by the type II secretion system [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR01710.1
type II secretion system major pseudopilin GspG
COORDINATES: protein motif:HMM:NF023444.2
COORDINATES: protein motif:HMM:NF019575.2
prepilin-type N-terminal cleavage/methylation domain-containing protein
COORDINATES: protein motif:HMM:NF015867.2
COORDINATES: protein motif:HMM:NF016992.2
COORDINATES: protein motif:HMM:NF040576.1
COORDINATES: protein motif:HMM:TIGR02517.1
COORDINATES: protein motif:HMM:TIGR00649.1
COORDINATES: protein motif:HMM:TIGR00530.1
lysophospholipid acyltransferase family protein
PEP-CTERM sorting domain-containing protein
COORDINATES: protein motif:HMM:NF024212.2
COORDINATES: similar to AA sequence:RefSeq:WP_013705808.1
COORDINATES: protein motif:HMM:NF014692.2
COORDINATES: protein motif:HMM:NF024240.2
COORDINATES: protein motif:HMM:NF014296.2
COORDINATES: protein motif:HMM:NF023646.2
COORDINATES: similar to AA sequence:RefSeq:WP_013822575.1
COORDINATES: similar to AA sequence:RefSeq:WP_013705664.1
COORDINATES: similar to AA sequence:RefSeq:WP_013705663.1
COORDINATES: protein motif:HMM:NF024924.2
COORDINATES: similar to AA sequence:RefSeq:WP_013705454.1
COORDINATES: protein motif:HMM:NF025210.2
COORDINATES: similar to AA sequence:RefSeq:WP_013705048.1
COORDINATES: similar to AA sequence:RefSeq:WP_013705049.1
COORDINATES: similar to AA sequence:RefSeq:WP_013705316.1
COORDINATES: similar to AA sequence:RefSeq:WP_015948015.1
COORDINATES: protein motif:HMM:NF013209.2
winged helix-turn-helix domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_011343854.1
COORDINATES: similar to AA sequence:RefSeq:WP_008870931.1
CoB--CoM heterodisulfide reductase iron-sulfur subunit A family protein
COORDINATES: protein motif:HMM:NF013862.2
patatin-like phospholipase family protein
COORDINATES: protein motif:HMM:NF019911.2
COORDINATES: protein motif:HMM:TIGR03263.1
GO:0004385 - guanylate kinase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF003315.0
COORDINATES: protein motif:HMM:TIGR00255.1
COORDINATES: protein motif:HMM:NF025743.2
COORDINATES: protein motif:HMM:TIGR00380.1
GO:0016880 - acid-ammonia (or amide) ligase activity [Evidence IEA]
adenosylcobinamide-phosphate synthase CbiB
COORDINATES: protein motif:HMM:TIGR01140.1
GO:0048472 - threonine-phosphate decarboxylase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF014575.2
GO:0005575 - cellular_component [Evidence IEA]
GO:0046118 - 7-methylguanosine biosynthetic process [Evidence IEA]; GO:0031167 - rRNA methylation [Evidence IEA]
16S rRNA (guanine(527)-N(7))-methyltransferase RsmG
COORDINATES: protein motif:HMM:NF003661.0
GO:0005525 - GTP binding [Evidence IEA]; GO:0003924 - GTPase activity [Evidence IEA]
tRNA uridine-5-carboxymethylaminomethyl(34) synthesis GTPase MnmE
COORDINATES: protein motif:HMM:NF024483.2
Jag N-terminal domain-containing protein
COORDINATES: protein motif:HMM:TIGR03593.1
GO:0051205 - protein insertion into membrane [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_020324524.1
membrane protein insertion efficiency factor YidD
COORDINATES: protein motif:HMM:NF013022.2
GO:0004526 - ribonuclease P activity [Evidence IEA]
GO:0006396 - RNA processing [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_003014180.1
COORDINATES: similar to AA sequence:RefSeq:WP_011417322.1
GO:0051539 - 4 iron, 4 sulfur cluster binding [Evidence IEA]; GO:1904047 - S-adenosyl-L-methionine binding [Evidence IEA]; GO:0016782 - transferase activity, transferring sulphur-containing groups [Evidence IEA]
tRNA (N6-isopentenyl adenosine(37)-C2)-methylthiotransferase MiaB
COORDINATES: similar to AA sequence:RefSeq:WP_011417323.1
COORDINATES: protein motif:HMM:NF004981.0
histidinol phosphate phosphatase domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_011011789.1
COORDINATES: similar to AA sequence:RefSeq:WP_014812731.1
COORDINATES: protein motif:HMM:NF013307.2
succinate dehydrogenase/fumarate reductase cytochrome b subunit
COORDINATES: protein motif:HMM:NF006383.0
GO:0022900 - electron transport chain [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_013343978.1
GO:0015074 - DNA integration [Evidence IEA]; GO:0006310 - DNA recombination [Evidence IEA]
COORDINATES: protein motif:HMM:NF011564.0
COORDINATES: similar to AA sequence:RefSeq:WP_014808281.1
GO:0008760 - UDP-N-acetylglucosamine 1-carboxyvinyltransferase activity [Evidence IEA]
UDP-N-acetylglucosamine 1-carboxyvinyltransferase
COORDINATES: protein motif:HMM:NF024850.2
COORDINATES: protein motif:HMM:NF014523.2
COORDINATES: protein motif:HMM:NF012920.2
COORDINATES: protein motif:HMM:NF021622.2
5-methylcytosine restriction system component-like protein
COORDINATES: protein motif:HMM:NF012441.2
GO:0006207 - 'de novo' pyrimidine nucleobase biosynthetic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_013706876.1
COORDINATES: similar to AA sequence:RefSeq:WP_013706875.1
COORDINATES: protein motif:HMM:NF014044.2
COORDINATES: protein motif:HMM:NF014304.2
transcriptional coactivator p15/PC4 family protein
COORDINATES: protein motif:HMM:NF037889.2
COORDINATES: similar to AA sequence:RefSeq:WP_076611176.1
programmed frameshift; Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: similar to AA sequence:RefSeq:WP_076611616.1
integrase core domain-containing protein
COORDINATES: protein motif:HMM:NF033592.1
COORDINATES: protein motif:HMM:NF013579.2
COORDINATES: protein motif:HMM:NF014691.2
COORDINATES: protein motif:HMM:NF013259.2
COORDINATES: protein motif:HMM:NF014534.2
GO:0003676 - nucleic acid binding [Evidence IEA]
HPF/RaiA family ribosome-associated protein
COORDINATES: similar to AA sequence:RefSeq:WP_014811582.1
GO:0051536 - iron-sulfur cluster binding [Evidence IEA]
AmmeMemoRadiSam system radical SAM enzyme
COORDINATES: protein motif:HMM:NF025173.2
COORDINATES: protein motif:HMM:NF012267.2
COORDINATES: similar to AA sequence:RefSeq:WP_011418585.1
GO:0004125 - L-seryl-tRNASec selenium transferase activity [Evidence IEA]
GO:0016260 - selenocysteine biosynthetic process [Evidence IEA]
COORDINATES: protein motif:HMM:NF024214.2
NTP transferase domain-containing protein
COORDINATES: protein motif:HMM:NF024869.2
COORDINATES: protein motif:HMM:NF013775.2
aminoglycoside phosphotransferase family protein
COORDINATES: similar to AA sequence:RefSeq:WP_014812044.1
GO:0016684 - oxidoreductase activity, acting on peroxide as acceptor [Evidence IEA]; GO:0008379 - thioredoxin peroxidase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_014809187.1
GO:0003849 - 3-deoxy-7-phosphoheptulonate synthase activity [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR01357.1
GO:0003856 - 3-dehydroquinate synthase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF012861.2
COORDINATES: protein motif:HMM:NF026257.2
COORDINATES: protein motif:HMM:NF012936.2
GO:0004066 - asparagine synthase (glutamine-hydrolyzing) activity [Evidence IEA]
GO:0006529 - asparagine biosynthetic process [Evidence IEA]
COORDINATES: protein motif:HMM:NF033537.1
COORDINATES: protein motif:HMM:NF033536.1
lasso peptide biosynthesis PqqD family chaperone
COORDINATES: protein motif:HMM:NF012888.2
sulfotransferase domain-containing protein
COORDINATES: protein motif:HMM:TIGR01127.1
GO:0004794 - L-threonine ammonia-lyase activity [Evidence IEA]
GO:0006549 - isoleucine metabolic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_014810382.1
GO:0000345 - cytosolic DNA-directed RNA polymerase complex [Evidence IEA]
GO:0003899 - DNA-directed 5'-3' RNA polymerase activity [Evidence IEA]
GO:0006351 - DNA-templated transcription [Evidence IEA]
DNA-directed RNA polymerase subunit omega
COORDINATES: protein motif:HMM:NF014573.2
COORDINATES: protein motif:HMM:NF003657.0
GO:0008780 - acyl-[acyl-carrier-protein]-UDP-N-acetylglucosamine O-acyltransferase activity [Evidence IEA]
GO:0008610 - lipid biosynthetic process [Evidence IEA]
acyl-ACP--UDP-N-acetylglucosamine O-acyltransferase
COORDINATES: similar to AA sequence:RefSeq:WP_014810654.1
COORDINATES: protein motif:HMM:TIGR02195.1
GO:0008920 - lipopolysaccharide heptosyltransferase activity [Evidence IEA]
GO:0009244 - lipopolysaccharide core region biosynthetic process [Evidence IEA]
lipopolysaccharide heptosyltransferase I
COORDINATES: protein motif:HMM:NF006506.0
GO:0016791 - phosphatase activity [Evidence IEA]
D-glycero-beta-D-manno-heptose 1,7-bisphosphate 7-phosphatase
lipopolysaccharide heptosyltransferase II
COORDINATES: protein motif:HMM:NF014645.2
GO:0009029 - tetraacyldisaccharide 4'-kinase activity [Evidence IEA]
GO:0009245 - lipid A biosynthetic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011418143.1
GO:0005319 - lipid transporter activity [Evidence IEA]
GO:0006869 - lipid transport [Evidence IEA]
lipid A export permease/ATP-binding protein MsbA
COORDINATES: protein motif:HMM:NF014693.2
COORDINATES: protein motif:HMM:TIGR00945.1
COORDINATES: similar to AA sequence:RefSeq:WP_011417872.1
COORDINATES: protein motif:HMM:NF012514.2
COORDINATES: protein motif:HMM:NF014244.2
COORDINATES: protein motif:HMM:TIGR00093.1
COORDINATES: similar to AA sequence:RefSeq:WP_011417220.1
GO:0004830 - tryptophan-tRNA ligase activity [Evidence IEA]
GO:0006436 - tryptophanyl-tRNA aminoacylation [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR01909.1
COORDINATES: protein motif:HMM:NF025052.2
COORDINATES: similar to AA sequence:RefSeq:WP_001057112.1
COORDINATES: protein motif:HMM:NF013429.2
COORDINATES: similar to AA sequence:RefSeq:WP_014810778.1
COORDINATES: protein motif:HMM:TIGR00580.1
GO:0005524 - ATP binding [Evidence IEA]; GO:0016887 - ATP hydrolysis activity [Evidence IEA]; GO:0003690 - double-stranded DNA binding [Evidence IEA]; GO:0005515 - protein binding [Evidence IEA]
COORDINATES: protein motif:HMM:NF024545.2
SurA N-terminal domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_014809018.1
GO:0004816 - asparagine-tRNA ligase activity [Evidence IEA]; GO:0005524 - ATP binding [Evidence IEA]
GO:0006421 - asparaginyl-tRNA aminoacylation [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_013705954.1
GO:0003747 - translation release factor activity [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR01525.1
COORDINATES: similar to AA sequence:RefSeq:WP_013705337.1
metal-dependent transcriptional regulator
COORDINATES: protein motif:HMM:NF024116.2
COORDINATES: protein motif:HMM:TIGR01845.1
GO:0009279 - cell outer membrane [Evidence IEA]
GO:0015288 - porin activity [Evidence IEA]
efflux transporter outer membrane subunit
COORDINATES: protein motif:HMM:NF013743.2
COORDINATES: protein motif:HMM:NF033823.0
COORDINATES: similar to AA sequence:RefSeq:WP_014808384.1
COORDINATES: protein motif:HMM:NF024917.2
COORDINATES: protein motif:HMM:NF004015.0
GO:0016884 - carbon-nitrogen ligase activity, with glutamine as amido-N-donor [Evidence IEA]
Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatB
COORDINATES: protein motif:HMM:TIGR00292.1
sulfide-dependent adenosine diphosphate thiazole synthase
COORDINATES: protein motif:HMM:NF013440.2
COORDINATES: protein motif:HMM:NF025038.2
COORDINATES: protein motif:HMM:TIGR00072.1
GO:0008233 - peptidase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF013334.2
hydrogenase maturation nickel metallochaperone HypA
COORDINATES: similar to AA sequence:RefSeq:WP_014810295.1
COORDINATES: similar to AA sequence:RefSeq:WP_014812808.1
COORDINATES: similar to AA sequence:RefSeq:WP_014813200.1
COORDINATES: similar to AA sequence:RefSeq:WP_014813199.1
COORDINATES: similar to AA sequence:RefSeq:WP_011417914.1
GO:0006189 - 'de novo' IMP biosynthetic process [Evidence IEA]
nickel pincer cofactor biosynthesis protein LarB
COORDINATES: protein motif:HMM:TIGR03472.1
GO:0016757 - glycosyltransferase activity [Evidence IEA]
bacteriohopanetetrol glucosamine biosynthesis glycosyltransferase HpnI
COORDINATES: similar to AA sequence:RefSeq:WP_013705997.1
COORDINATES: similar to AA sequence:RefSeq:WP_013705996.1
COORDINATES: protein motif:HMM:NF021254.2
COORDINATES: protein motif:HMM:NF023568.2
COORDINATES: protein motif:HMM:NF039580.1
GO:0016746 - acyltransferase activity [Evidence IEA]
1-acyl-sn-glycerol-3-phosphate acyltransferase
COORDINATES: protein motif:HMM:TIGR01499.1
bifunctional folylpolyglutamate synthase/dihydrofolate synthase
COORDINATES: similar to AA sequence:RefSeq:WP_011418114.1
GO:0009345 - glycine-tRNA ligase complex [Evidence IEA]
GO:0004820 - glycine-tRNA ligase activity [Evidence IEA]
GO:0006426 - glycyl-tRNA aminoacylation [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR00211.2
COORDINATES: protein motif:HMM:TIGR00064.1
GO:0003924 - GTPase activity [Evidence IEA]; GO:0005047 - signal recognition particle binding [Evidence IEA]
signal recognition particle-docking protein FtsY
COORDINATES: protein motif:HMM:NF037970.1
COORDINATES: protein motif:HMM:NF017044.2
COORDINATES: protein motif:HMM:TIGR02037.1
COORDINATES: protein motif:HMM:NF013645.2
COORDINATES: similar to AA sequence:RefSeq:WP_014810755.1
GO:0015930 - glutamate synthase activity [Evidence IEA]; GO:0016638 - oxidoreductase activity, acting on the CH-NH2 group of donors [Evidence IEA]
COORDINATES: protein motif:HMM:NF013784.2
COORDINATES: similar to AA sequence:RefSeq:WP_013705317.1
COORDINATES: similar to AA sequence:RefSeq:WP_011418944.1
COORDINATES: similar to AA sequence:RefSeq:WP_014809080.1
GO:0005951 - carbamoyl-phosphate synthase complex [Evidence IEA]
GO:0004088 - carbamoyl-phosphate synthase (glutamine-hydrolyzing) activity [Evidence IEA]
glutamine-hydrolyzing carbamoyl-phosphate synthase small subunit
COORDINATES: protein motif:HMM:NF019540.2
type II toxin-antitoxin system HicA family toxin
COORDINATES: similar to AA sequence:RefSeq:WP_013707861.1
type II toxin-antitoxin system HicB family antitoxin
COORDINATES: protein motif:HMM:NF027249.2
COORDINATES: protein motif:HMM:NF017847.2
COORDINATES: protein motif:HMM:NF014021.2
COORDINATES: protein motif:HMM:NF019542.2
COORDINATES: similar to AA sequence:RefSeq:WP_014807970.1
GO:0005524 - ATP binding [Evidence IEA]; GO:0046872 - metal ion binding [Evidence IEA]
GO:0006807 - nitrogen compound metabolic process [Evidence IEA]
carbamoyl-phosphate synthase large subunit
COORDINATES: similar to AA sequence:RefSeq:WP_012248335.1
GO:0006402 - mRNA catabolic process [Evidence IEA]; GO:0006109 - regulation of carbohydrate metabolic process [Evidence IEA]
COORDINATES: protein motif:HMM:NF012692.2
COORDINATES: protein motif:HMM:TIGR00057.1
COORDINATES: similar to AA sequence:RefSeq:WP_013706042.1
GO:0051539 - 4 iron, 4 sulfur cluster binding [Evidence IEA]; GO:0010181 - FMN binding [Evidence IEA]; GO:0051287 - NAD binding [Evidence IEA]; GO:0008137 - NADH dehydrogenase (ubiquinone) activity [Evidence IEA]
NADH-quinone oxidoreductase subunit NuoF
COORDINATES: similar to AA sequence:RefSeq:WP_013706032.1
GO:0009326 - formate dehydrogenase complex [Evidence IEA]
GO:0008863 - formate dehydrogenase (NAD+) activity [Evidence IEA]
GO:0015942 - formate metabolic process [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR02141.1
GO:0055052 - ATP-binding cassette (ABC) transporter complex, substrate-binding subunit-containing [Evidence IEA]; GO:0005887 - integral component of plasma membrane [Evidence IEA]
GO:0015412 - ABC-type molybdate transporter activity [Evidence IEA]
GO:0015689 - molybdate ion transport [Evidence IEA]
molybdate ABC transporter permease subunit
GO:0031362 - anchored component of external side of plasma membrane [Evidence IEA]; GO:0055052 - ATP-binding cassette (ABC) transporter complex, substrate-binding subunit-containing [Evidence IEA]; GO:0030288 - outer membrane-bounded periplasmic space [Evidence IEA]
GO:0015412 - ABC-type molybdate transporter activity [Evidence IEA]; GO:0030973 - molybdate ion binding [Evidence IEA]
molybdate ABC transporter substrate-binding protein
COORDINATES: similar to AA sequence:RefSeq:WP_011418743.1
COORDINATES: similar to AA sequence:RefSeq:WP_014812345.1
COORDINATES: similar to AA sequence:RefSeq:WP_000809131.1
COORDINATES: similar to AA sequence:RefSeq:WP_013706031.1
COORDINATES: similar to AA sequence:RefSeq:WP_013706047.1
COORDINATES: protein motif:HMM:NF014505.2
type II toxin-antitoxin system PemK/MazF family toxin
COORDINATES: similar to AA sequence:RefSeq:WP_013706048.1
COORDINATES: similar to AA sequence:RefSeq:WP_013706043.1
COORDINATES: similar to AA sequence:RefSeq:WP_013706046.1
COORDINATES: similar to AA sequence:RefSeq:WP_013707512.1
COORDINATES: protein motif:HMM:NF013614.2
SufD family Fe-S cluster assembly protein
COORDINATES: protein motif:HMM:NF015181.2
GO:0003824 - catalytic activity [Evidence IEA]; GO:0005525 - GTP binding [Evidence IEA]
molybdopterin-guanine dinucleotide biosynthesis protein B
COORDINATES: protein motif:HMM:NF014664.2
carboxymuconolactone decarboxylase family protein
COORDINATES: protein motif:HMM:NF013117.2
COORDINATES: protein motif:HMM:TIGR00400.1
GO:0015095 - magnesium ion transmembrane transporter activity [Evidence IEA]
GO:0015693 - magnesium ion transport [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011416196.1
COORDINATES: similar to AA sequence:RefSeq:WP_013707180.1
COORDINATES: protein motif:HMM:NF014420.2
GO:0043190 - ATP-binding cassette (ABC) transporter complex [Evidence IEA]; GO:0005887 - integral component of plasma membrane [Evidence IEA]
GO:0032778 - P-type cobalt transporter activity [Evidence IEA]
GO:0006824 - cobalt ion transport [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_014811004.1
COORDINATES: similar to AA sequence:RefSeq:WP_013705345.1
COORDINATES: similar to AA sequence:RefSeq:WP_014808579.1
COORDINATES: protein motif:HMM:NF013257.2
COORDINATES: protein motif:HMM:NF019581.2
COORDINATES: protein motif:HMM:NF024087.2
COORDINATES: protein motif:HMM:NF039796.1
COORDINATES: protein motif:HMM:NF001899.0
GO:0004373 - glycogen (starch) synthase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF014045.2
COORDINATES: protein motif:HMM:TIGR00331.1
GO:0009408 - response to heat [Evidence IEA]
heat-inducible transcriptional repressor HrcA
COORDINATES: protein motif:HMM:NF010738.0
GO:0000774 - adenyl-nucleotide exchange factor activity [Evidence IEA]; GO:0051087 - chaperone binding [Evidence IEA]; GO:0042803 - protein homodimerization activity [Evidence IEA]
GO:0006457 - protein folding [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_014809548.1
COORDINATES: protein motif:HMM:NF016251.2
COORDINATES: protein motif:HMM:NF015535.2
COORDINATES: protein motif:HMM:NF017181.2
COORDINATES: protein motif:HMM:TIGR03598.1
ribosome biogenesis GTP-binding protein YihA/YsxC
B12-binding domain-containing radical SAM protein
COORDINATES: similar to AA sequence:RefSeq:WP_011418616.1
GO:0003676 - nucleic acid binding [Evidence IEA]; GO:0004523 - RNA-DNA hybrid ribonuclease activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF014635.2
COORDINATES: similar to AA sequence:RefSeq:WP_014809596.1
COORDINATES: similar to AA sequence:RefSeq:WP_014812635.1
COORDINATES: protein motif:HMM:NF024376.2
phosphate/phosphite/phosphonate ABC transporter substrate-binding protein
COORDINATES: protein motif:HMM:NF028512.2
COORDINATES: protein motif:HMM:NF012958.2
COORDINATES: protein motif:HMM:NF024675.2
COORDINATES: protein motif:HMM:NF016155.2
COORDINATES: protein motif:HMM:TIGR00216.1
GO:0051745 - 4-hydroxy-3-methylbut-2-en-1-yl diphosphate reductase activity [Evidence IEA]
GO:0009240 - isopentenyl diphosphate biosynthetic process [Evidence IEA]; GO:0046677 - response to antibiotic [Evidence IEA]; GO:0015968 - stringent response [Evidence IEA]
4-hydroxy-3-methylbut-2-enyl diphosphate reductase
COORDINATES: similar to AA sequence:RefSeq:WP_014812786.1
COORDINATES: similar to AA sequence:RefSeq:WP_014811938.1
COORDINATES: similar to AA sequence:RefSeq:WP_014812610.1
GO:0050242 - pyruvate, phosphate dikinase activity [Evidence IEA]
GO:0015976 - carbon utilization [Evidence IEA]
COORDINATES: protein motif:HMM:NF012905.2
COORDINATES: similar to AA sequence:RefSeq:WP_014811762.1
COORDINATES: protein motif:HMM:NF037959.1
COORDINATES: protein motif:HMM:TIGR00560.1
GO:0008444 - CDP-diacylglycerol-glycerol-3-phosphate 3-phosphatidyltransferase activity [Evidence IEA]
CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase
COORDINATES: protein motif:HMM:TIGR00174.1
GO:0052381 - tRNA dimethylallyltransferase activity [Evidence IEA]
tRNA (adenosine(37)-N6)-dimethylallyltransferase MiaA
COORDINATES: protein motif:HMM:NF014724.2
COORDINATES: protein motif:HMM:NF014001.2
GO:0003950 - NAD+ ADP-ribosyltransferase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_014810777.1
COORDINATES: protein motif:HMM:NF016326.2
COORDINATES: similar to AA sequence:RefSeq:WP_011419059.1
COORDINATES: protein motif:HMM:NF024938.2
COORDINATES: protein motif:HMM:NF011494.0
GO:0008168 - methyltransferase activity [Evidence IEA]; GO:0003723 - RNA binding [Evidence IEA]
GO:0006355 - regulation of DNA-templated transcription [Evidence IEA]; GO:0001510 - RNA methylation [Evidence IEA]
16S rRNA (cytosine(967)-C(5))-methyltransferase RsmB
COORDINATES: protein motif:HMM:NF014078.2
COORDINATES: protein motif:HMM:TIGR00460.1
GO:0004479 - methionyl-tRNA formyltransferase activity [Evidence IEA]
GO:0006431 - methionyl-tRNA aminoacylation [Evidence IEA]
COORDINATES: protein motif:HMM:NF001159.1
GO:0042586 - peptide deformylase activity [Evidence IEA]
GO:0036211 - protein modification process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_083800224.1
GO:0051920 - peroxiredoxin activity [Evidence IEA]
Most members of this family contain a selenocysteine; Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: similar to AA sequence:RefSeq:WP_002218620.1
COORDINATES: protein motif:HMM:NF013629.2
COORDINATES: similar to AA sequence:RefSeq:WP_013706145.1
COORDINATES: similar to AA sequence:RefSeq:WP_011416535.1
COORDINATES: protein motif:HMM:TIGR00219.1
GO:0008360 - regulation of cell shape [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR03423.1
COORDINATES: similar to AA sequence:RefSeq:WP_014809603.1
GO:0004719 - protein-L-isoaspartate (D-aspartate) O-methyltransferase activity [Evidence IEA]
protein-L-isoaspartate(D-aspartate) O-methyltransferase
COORDINATES: protein motif:HMM:NF013539.2
glycine zipper 2TM domain-containing protein
COORDINATES: protein motif:HMM:TIGR01647.1
plasma-membrane proton-efflux P-type ATPase
COORDINATES: similar to AA sequence:RefSeq:WP_014809039.1
COORDINATES: protein motif:HMM:NF015147.2
COORDINATES: protein motif:HMM:NF020965.2
COORDINATES: protein motif:HMM:TIGR02191.1
GO:0004525 - ribonuclease III activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF013073.2
COORDINATES: protein motif:HMM:NF024067.2
COORDINATES: protein motif:HMM:NF018627.2
COORDINATES: protein motif:HMM:NF012383.2
phosphoribosyltransferase family protein
COORDINATES: protein motif:HMM:NF012717.2
COORDINATES: similar to AA sequence:RefSeq:WP_013707052.1
COORDINATES: protein motif:HMM:NF012549.2
COORDINATES: protein motif:HMM:NF004739.1
GO:0051287 - NAD binding [Evidence IEA]; GO:0016651 - oxidoreductase activity, acting on NAD(P)H [Evidence IEA]; GO:0048038 - quinone binding [Evidence IEA]
COORDINATES: protein motif:HMM:NF004741.0
NADH-quinone oxidoreductase subunit NuoH
COORDINATES: protein motif:HMM:TIGR01971.1
COORDINATES: protein motif:HMM:NF012709.2
COORDINATES: similar to AA sequence:RefSeq:WP_014810573.1
GO:0016651 - oxidoreductase activity, acting on NAD(P)H [Evidence IEA]
GO:0042773 - ATP synthesis coupled electron transport [Evidence IEA]
NADH-quinone oxidoreductase subunit NuoK
COORDINATES: protein motif:HMM:TIGR01974.1
GO:0050136 - NADH dehydrogenase (quinone) activity [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR01972.1
COORDINATES: protein motif:HMM:TIGR01770.1
COORDINATES: similar to AA sequence:RefSeq:WP_014809818.1
NifB/NifX family molybdenum-iron cluster-binding protein
COORDINATES: protein motif:HMM:NF013738.2
iron-sulfur cluster assembly scaffold protein NifU
COORDINATES: protein motif:HMM:NF021390.2
COORDINATES: similar to AA sequence:RefSeq:WP_014808594.1
COORDINATES: similar to AA sequence:RefSeq:WP_014808599.1
GO:0005524 - ATP binding [Evidence IEA]; GO:0016887 - ATP hydrolysis activity [Evidence IEA]; GO:0004252 - serine-type endopeptidase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_014808596.1
COORDINATES: protein motif:HMM:TIGR04163.1
peptide-modifying radical SAM enzyme CbpB
COORDINATES: protein motif:HMM:TIGR04164.1
COORDINATES: protein motif:HMM:TIGR00254.1
GO:0009975 - cyclase activity [Evidence IEA]
GO:0009966 - regulation of signal transduction [Evidence IEA]
COORDINATES: protein motif:HMM:NF013970.2
COORDINATES: similar to AA sequence:RefSeq:WP_012845339.1
type II toxin-antitoxin system prevent-host-death family antitoxin
COORDINATES: similar to AA sequence:RefSeq:WP_013706702.1
TonB-dependent receptor plug domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_013706211.1
COORDINATES: similar to AA sequence:RefSeq:WP_014808969.1
GO:0003700 - DNA-binding transcription factor activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_013706493.1
COORDINATES: similar to AA sequence:RefSeq:WP_116919955.1
GO:0015562 - efflux transmembrane transporter activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_013706491.1
COORDINATES: protein motif:HMM:NF014582.2
COORDINATES: similar to AA sequence:RefSeq:WP_013707450.1
COORDINATES: similar to AA sequence:RefSeq:WP_013706706.1
COORDINATES: similar to AA sequence:RefSeq:WP_013707063.1
COORDINATES: protein motif:HMM:NF015506.2
GO:0015291 - secondary active transmembrane transporter activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF014762.2
COORDINATES: similar to AA sequence:RefSeq:WP_013706204.1
COORDINATES: protein motif:HMM:TIGR03725.1
GO:0003725 - double-stranded RNA binding [Evidence IEA]
tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex dimerization subunit type 1 TsaB
COORDINATES: similar to AA sequence:RefSeq:WP_014812392.1
COORDINATES: similar to AA sequence:RefSeq:WP_014811883.1
COORDINATES: similar to AA sequence:RefSeq:WP_013705312.1
COORDINATES: similar to AA sequence:RefSeq:WP_011418206.1
COORDINATES: protein motif:HMM:NF012982.2
GO:0016311 - dephosphorylation [Evidence IEA]
dual specificity protein phosphatase family protein
COORDINATES: protein motif:HMM:TIGR00702.1
COORDINATES: protein motif:HMM:NF027889.2
COORDINATES: protein motif:HMM:NF023514.2
COORDINATES: protein motif:HMM:NF013567.2
COORDINATES: protein motif:HMM:TIGR00215.1
GO:0008915 - lipid-A-disaccharide synthase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF006707.0
GO:0004332 - fructose-bisphosphate aldolase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_013705438.1
COORDINATES: protein motif:HMM:NF012451.2
COORDINATES: protein motif:HMM:NF022750.2
COORDINATES: protein motif:HMM:NF015211.2
COORDINATES: similar to AA sequence:RefSeq:WP_014809954.1
GO:0004802 - transketolase activity [Evidence IEA]
GO:0006098 - pentose-phosphate shunt [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011229347.1
COORDINATES: protein motif:HMM:NF012488.2
alanine--glyoxylate aminotransferase family protein
COORDINATES: similar to AA sequence:RefSeq:WP_014810209.1
GO:0004617 - phosphoglycerate dehydrogenase activity [Evidence IEA]
GO:0006564 - L-serine biosynthetic process [Evidence IEA]
COORDINATES: protein motif:HMM:NF020473.2
COORDINATES: protein motif:HMM:NF011202.0
GO:0050515 - 4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol kinase activity [Evidence IEA]
4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol kinase
COORDINATES: similar to AA sequence:RefSeq:WP_011417786.1
COORDINATES: protein motif:HMM:NF013368.2
GO:0004045 - aminoacyl-tRNA hydrolase activity [Evidence IEA]
COORDINATES: nucleotide motif:Rfam:14.4:RF00379
cyclic di-AMP (ydaO/yuaA leader) riboswitch senses the signaling molecule cyclic di-AMP; Derived by automated computational analysis using gene prediction method: cmsearch.
COORDINATES: similar to AA sequence:RefSeq:WP_013707628.1
COORDINATES: similar to AA sequence:RefSeq:WP_014809379.1
COORDINATES: similar to AA sequence:RefSeq:WP_014809378.1
COORDINATES: protein motif:HMM:NF021551.2
CRISPR system precrRNA processing endoribonuclease RAMP protein Cas6
COORDINATES: protein motif:HMM:NF027602.2
COORDINATES: protein motif:HMM:NF012307.2
reverse transcriptase domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_014812009.1
GO:0004450 - isocitrate dehydrogenase (NADP+) activity [Evidence IEA]
GO:0006099 - tricarboxylic acid cycle [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR02198.1
GO:0016773 - phosphotransferase activity, alcohol group as acceptor [Evidence IEA]
D-glycero-beta-D-manno-heptose-7-phosphate kinase
COORDINATES: similar to AA sequence:RefSeq:WP_013706041.1
COORDINATES: protein motif:HMM:NF014788.2
phosphoribosylformylglycinamidine synthase subunit PurS
COORDINATES: protein motif:HMM:NF020940.2
COORDINATES: similar to AA sequence:RefSeq:WP_014810343.1
COORDINATES: similar to AA sequence:RefSeq:WP_014810342.1
COORDINATES: similar to AA sequence:RefSeq:WP_011416373.1
GO:0051536 - iron-sulfur cluster binding [Evidence IEA]; GO:0016661 - oxidoreductase activity, acting on other nitrogenous compounds as donors [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_014810339.1
Crp/Fnr family transcriptional regulator
COORDINATES: similar to AA sequence:RefSeq:WP_013707014.1
COORDINATES: similar to AA sequence:RefSeq:WP_014812104.1
COORDINATES: similar to AA sequence:RefSeq:WP_013706292.1
COORDINATES: similar to AA sequence:RefSeq:WP_013706291.1
COORDINATES: protein motif:HMM:NF015871.2
COORDINATES: protein motif:HMM:TIGR03025.1
CpsD/CapB family tyrosine-protein kinase
GO:0015159 - polysaccharide transmembrane transporter activity [Evidence IEA]
GO:0015774 - polysaccharide transport [Evidence IEA]
COORDINATES: protein motif:HMM:NF014732.2
GO:0009103 - lipopolysaccharide biosynthetic process [Evidence IEA]
Wzz/FepE/Etk N-terminal domain-containing protein
COORDINATES: protein motif:HMM:NF016800.2
COORDINATES: protein motif:HMM:NF015013.2
COORDINATES: protein motif:HMM:TIGR01536.1
asparagine synthase (glutamine-hydrolyzing)
COORDINATES: protein motif:HMM:TIGR00696.1
GO:0043163 - cell envelope organization [Evidence IEA]
WecB/TagA/CpsF family glycosyltransferase
COORDINATES: protein motif:HMM:NF028199.2
COORDINATES: protein motif:HMM:NF018647.2
COORDINATES: protein motif:HMM:NF016358.2
COORDINATES: protein motif:HMM:NF018357.2
COORDINATES: similar to AA sequence:RefSeq:WP_014811603.1
COORDINATES: protein motif:HMM:NF016724.2
COORDINATES: protein motif:HMM:NF024491.2
COORDINATES: similar to AA sequence:RefSeq:WP_011416003.1
COORDINATES: similar to AA sequence:RefSeq:WP_246892336.1
COORDINATES: protein motif:HMM:NF013426.2
NADH-quinone oxidoreductase subunit NuoE
COORDINATES: similar to AA sequence:RefSeq:WP_011416000.1
GO:0019164 - pyruvate synthase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011415999.1
2-ketoisovalerate ferredoxin oxidoreductase subunit alpha
COORDINATES: similar to AA sequence:RefSeq:WP_014813281.1
COORDINATES: similar to AA sequence:RefSeq:WP_014813280.1
2-oxoacid:acceptor oxidoreductase family protein
COORDINATES: protein motif:HMM:NF008629.1
GO:0004519 - endonuclease activity [Evidence IEA]
cleaves DNA at apurinic or apyrimidinic sites; Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: similar to AA sequence:RefSeq:WP_011417168.1
COORDINATES: protein motif:HMM:TIGR02432.1
GO:0016879 - ligase activity, forming carbon-nitrogen bonds [Evidence IEA]
COORDINATES: protein motif:HMM:NF026177.2
COORDINATES: protein motif:HMM:NF015644.2
COORDINATES: protein motif:HMM:NF016839.2
septum formation initiator family protein
COORDINATES: similar to AA sequence:RefSeq:WP_014811474.1
COORDINATES: similar to AA sequence:RefSeq:WP_014808296.1
COORDINATES: similar to AA sequence:RefSeq:WP_011416622.1
COORDINATES: protein motif:HMM:NF008956.0
GO:0005525 - GTP binding [Evidence IEA]; GO:0003924 - GTPase activity [Evidence IEA]; GO:0000287 - magnesium ion binding [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011416620.1
GO:0004349 - glutamate 5-kinase activity [Evidence IEA]
GO:0006561 - proline biosynthetic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011417671.1
GO:0004350 - glutamate-5-semialdehyde dehydrogenase activity [Evidence IEA]; GO:0016620 - oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor [Evidence IEA]
COORDINATES: protein motif:HMM:NF000840.1
nicotinate-nucleotide adenylyltransferase
COORDINATES: protein motif:HMM:TIGR00090.1
GO:0043022 - ribosome binding [Evidence IEA]
GO:0017148 - negative regulation of translation [Evidence IEA]
COORDINATES: protein motif:HMM:NF024598.2
COORDINATES: protein motif:HMM:NF019378.2
COORDINATES: protein motif:HMM:NF021507.2
phosphodiester glycosidase family protein
COORDINATES: protein motif:HMM:TIGR00010.1
COORDINATES: protein motif:HMM:TIGR00044.1
GO:0030170 - pyridoxal phosphate binding [Evidence IEA]
YggS family pyridoxal phosphate-dependent enzyme
COORDINATES: protein motif:HMM:NF017828.2
COORDINATES: protein motif:HMM:TIGR00241.1
GO:0008047 - enzyme activator activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF024835.2
COORDINATES: protein motif:HMM:NF014877.2
phosphoglucomutase/phosphomannomutase family protein
COORDINATES: similar to AA sequence:RefSeq:WP_014811093.1
GO:0004013 - adenosylhomocysteinase activity [Evidence IEA]
GO:0006730 - one-carbon metabolic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_014811092.1
COORDINATES: similar to AA sequence:RefSeq:WP_011417144.1
GO:0004068 - aspartate 1-decarboxylase activity [Evidence IEA]
GO:0006523 - alanine biosynthetic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011417143.1
GO:0004592 - pantoate-beta-alanine ligase activity [Evidence IEA]
GO:0015940 - pantothenate biosynthetic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_014813164.1
COORDINATES: protein motif:HMM:NF013346.2
COORDINATES: nucleotide motif:Rfam:14.4:RF00080
yybP-ykoY riboswitch is a manganese riboswitch that directly binds Mn; Derived by automated computational analysis using gene prediction method: cmsearch.
COORDINATES: protein motif:HMM:NF013069.2
COORDINATES: protein motif:HMM:NF024895.2
COORDINATES: protein motif:HMM:TIGR01475.1
GO:0008412 - 4-hydroxybenzoate octaprenyltransferase activity [Evidence IEA]
GO:0006744 - ubiquinone biosynthetic process [Evidence IEA]
putative 4-hydroxybenzoate polyprenyltransferase
COORDINATES: similar to AA sequence:RefSeq:WP_014808222.1
GO:0016831 - carboxy-lyase activity [Evidence IEA]
GO:0009234 - menaquinone biosynthetic process [Evidence IEA]
COORDINATES: protein motif:HMM:NF014658.2
MTAP family purine nucleoside phosphorylase
COORDINATES: protein motif:HMM:TIGR03699.1
COORDINATES: protein motif:HMM:TIGR03700.1
COORDINATES: protein motif:HMM:NF012655.2
TetR/AcrR family transcriptional regulator
COORDINATES: similar to AA sequence:RefSeq:WP_014811457.1
GO:0004812 - aminoacyl-tRNA ligase activity [Evidence IEA]; GO:0005524 - ATP binding [Evidence IEA]; GO:0000166 - nucleotide binding [Evidence IEA]; GO:0004832 - valine-tRNA ligase activity [Evidence IEA]
GO:0006438 - valyl-tRNA aminoacylation [Evidence IEA]
COORDINATES: protein motif:HMM:NF013013.2
GO:0004399 - histidinol dehydrogenase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011417817.1
GO:0003933 - GTP cyclohydrolase activity [Evidence IEA]
GO:0035998 - 7,8-dihydroneopterin 3'-triphosphate biosynthetic process [Evidence IEA]
COORDINATES: protein motif:HMM:NF020893.2
COORDINATES: protein motif:HMM:TIGR01212.1
This family includes YhcC from E. coli K-12, an uncharacterized radical SAM protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: protein motif:HMM:TIGR00046.1
COORDINATES: protein motif:HMM:NF024874.2
COORDINATES: similar to AA sequence:RefSeq:YP_005229143.1
GO:0022625 - cytosolic large ribosomal subunit [Evidence IEA]; GO:0005762 - mitochondrial large ribosomal subunit [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_014812977.1
DNA-directed RNA polymerase subunit alpha
COORDINATES: similar to AA sequence:RefSeq:WP_016801712.1
GO:0015935 - small ribosomal subunit [Evidence IEA]
GO:0019843 - rRNA binding [Evidence IEA]; GO:0003735 - structural constituent of ribosome [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_001029758.1
COORDINATES: similar to AA sequence:RefSeq:WP_000090796.1
GO:0022627 - cytosolic small ribosomal subunit [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_003720928.1
COORDINATES: similar to AA sequence:RefSeq:WP_003130554.1
GO:0003743 - translation initiation factor activity [Evidence IEA]
GO:0006413 - translational initiation [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_014811623.1
COORDINATES: similar to AA sequence:RefSeq:WP_003128018.1
GO:0005524 - ATP binding [Evidence IEA]; GO:0019205 - nucleobase-containing compound kinase activity [Evidence IEA]; GO:0016776 - phosphotransferase activity, phosphate group as acceptor [Evidence IEA]
GO:0006139 - nucleobase-containing compound metabolic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_014812971.1
GO:0015450 - protein-transporting ATPase activity [Evidence IEA]
GO:0043952 - protein transport by the Sec complex [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:YP_500960.1
COORDINATES: similar to AA sequence:RefSeq:WP_009336598.1
COORDINATES: similar to AA sequence:RefSeq:WP_016293490.1
GO:0022627 - cytosolic small ribosomal subunit [Evidence IEA]; GO:0000312 - plastid small ribosomal subunit [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_017794725.1
COORDINATES: similar to AA sequence:RefSeq:WP_011416230.1
GO:0022625 - cytosolic large ribosomal subunit [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_009754342.1
COORDINATES: similar to AA sequence:RefSeq:WP_002946164.1
COORDINATES: similar to AA sequence:RefSeq:WP_011416227.1
COORDINATES: similar to AA sequence:RefSeq:WP_002461784.1
COORDINATES: similar to AA sequence:RefSeq:WP_007073026.1
COORDINATES: similar to AA sequence:RefSeq:WP_007628116.1
COORDINATES: similar to AA sequence:RefSeq:WP_000855718.1
COORDINATES: similar to AA sequence:RefSeq:WP_011416222.1
COORDINATES: similar to AA sequence:RefSeq:WP_018003278.1
COORDINATES: similar to AA sequence:RefSeq:YP_005229163.1
COORDINATES: similar to AA sequence:RefSeq:WP_011148791.1
COORDINATES: similar to AA sequence:RefSeq:NP_312209.1
COORDINATES: protein motif:HMM:NF004363.0
COORDINATES: similar to AA sequence:RefSeq:WP_014812952.1
COORDINATES: similar to AA sequence:RefSeq:WP_000579825.1
COORDINATES: similar to AA sequence:RefSeq:WP_003672692.1
GO:0003723 - RNA binding [Evidence IEA]; GO:0003735 - structural constituent of ribosome [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011416212.1
COORDINATES: similar to AA sequence:RefSeq:WP_211374394.1
COORDINATES: similar to AA sequence:RefSeq:WP_013054923.1
COORDINATES: similar to AA sequence:RefSeq:WP_020878811.1
COORDINATES: similar to AA sequence:RefSeq:WP_011416207.1
DNA-directed RNA polymerase subunit beta'
COORDINATES: similar to AA sequence:RefSeq:WP_014812944.1
DNA-directed RNA polymerase subunit beta
COORDINATES: similar to AA sequence:RefSeq:WP_005122872.1
COORDINATES: protein motif:HMM:NF000955.1
GO:0015934 - large ribosomal subunit [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_014812941.1
COORDINATES: similar to AA sequence:RefSeq:WP_014812940.1
COORDINATES: similar to AA sequence:RefSeq:WP_011416201.1
transcription termination/antitermination protein NusG
COORDINATES: protein motif:HMM:TIGR00964.1
COORDINATES: similar to AA sequence:RefSeq:WP_001265708.1
COORDINATES: similar to AA sequence:RefSeq:WP_013706928.1
COORDINATES: protein motif:HMM:NF019561.2
COORDINATES: protein motif:HMM:TIGR00159.1
GO:0004016 - adenylate cyclase activity [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR01496.1
GO:0004156 - dihydropteroate synthase activity [Evidence IEA]
GO:0009396 - folic acid-containing compound biosynthetic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_013707374.1
GO:0016887 - ATP hydrolysis activity [Evidence IEA]; GO:0004222 - metalloendopeptidase activity [Evidence IEA]
GO:0051301 - cell division [Evidence IEA]; GO:0006508 - proteolysis [Evidence IEA]
COORDINATES: protein motif:HMM:NF013355.2
COORDINATES: similar to AA sequence:RefSeq:WP_013706445.1
COORDINATES: protein motif:HMM:NF017917.2
COORDINATES: protein motif:HMM:NF017850.2
COORDINATES: protein motif:HMM:NF021627.2
COORDINATES: similar to AA sequence:RefSeq:WP_013707146.1
Mu-like prophage major head subunit gpT family protein
COORDINATES: protein motif:HMM:NF018704.2
COORDINATES: protein motif:HMM:NF020447.2
COORDINATES: protein motif:HMM:NF024777.2
COORDINATES: protein motif:HMM:NF012385.2
COORDINATES: similar to AA sequence:RefSeq:WP_014811424.1
GO:0004015 - adenosylmethionine-8-amino-7-oxononanoate transaminase activity [Evidence IEA]
adenosylmethionine--8-amino-7-oxononanoate transaminase
COORDINATES: similar to AA sequence:RefSeq:WP_011419057.1
GO:0008690 - 3-deoxy-manno-octulosonate cytidylyltransferase activity [Evidence IEA]
3-deoxy-manno-octulosonate cytidylyltransferase
COORDINATES: similar to AA sequence:RefSeq:WP_003849026.1
COORDINATES: similar to AA sequence:RefSeq:WP_013705471.1
MlaE family lipid ABC transporter permease subunit
COORDINATES: similar to AA sequence:RefSeq:WP_013705472.1
COORDINATES: protein motif:HMM:TIGR04430.1
GO:0015914 - phospholipid transport [Evidence IEA]
outer membrane lipid asymmetry maintenance protein MlaD
COORDINATES: protein motif:HMM:NF017319.2
COORDINATES: protein motif:HMM:TIGR00369.1
COORDINATES: protein motif:HMM:NF015251.2
COORDINATES: similar to AA sequence:RefSeq:WP_011415980.1
COORDINATES: protein motif:HMM:NF015941.2
COORDINATES: protein motif:HMM:TIGR00383.1
GO:0015087 - cobalt ion transmembrane transporter activity [Evidence IEA]; GO:0015095 - magnesium ion transmembrane transporter activity [Evidence IEA]
GO:0006824 - cobalt ion transport [Evidence IEA]; GO:0015693 - magnesium ion transport [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_014812391.1
COORDINATES: similar to AA sequence:RefSeq:WP_003244540.1
GO:0005524 - ATP binding [Evidence IEA]; GO:0003677 - DNA binding [Evidence IEA]; GO:0003916 - DNA topoisomerase activity [Evidence IEA]; GO:0003918 - DNA topoisomerase type II (double strand cut, ATP-hydrolyzing) activity [Evidence IEA]
GO:0006259 - DNA metabolic process [Evidence IEA]; GO:0006265 - DNA topological change [Evidence IEA]
COORDINATES: protein motif:HMM:NF000942.0
NAD(P)-dependent glycerol-3-phosphate dehydrogenase
COORDINATES: similar to AA sequence:RefSeq:WP_011417697.1
GO:0005524 - ATP binding [Evidence IEA]; GO:0004825 - methionine-tRNA ligase activity [Evidence IEA]; GO:0000049 - tRNA binding [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_013706207.1
COORDINATES: similar to AA sequence:RefSeq:WP_115442840.1
COORDINATES: similar to AA sequence:RefSeq:WP_013706205.1
COORDINATES: protein motif:HMM:NF015000.2
glycerophosphodiester phosphodiesterase family protein
COORDINATES: similar to AA sequence:RefSeq:WP_014809623.1
COORDINATES: protein motif:HMM:NF014912.2
COORDINATES: protein motif:HMM:NF024118.2
COORDINATES: protein motif:HMM:NF012568.2
COORDINATES: protein motif:HMM:TIGR00089.1
GO:0051539 - 4 iron, 4 sulfur cluster binding [Evidence IEA]; GO:1904047 - S-adenosyl-L-methionine binding [Evidence IEA]; GO:0008172 - S-methyltransferase activity [Evidence IEA]; GO:0016782 - transferase activity, transferring sulphur-containing groups [Evidence IEA]
GO:0018339 - peptidyl-L-beta-methylthioaspartic acid biosynthetic process from peptidyl-aspartic acid [Evidence IEA]
30S ribosomal protein S12 methylthiotransferase RimO
COORDINATES: protein motif:HMM:NF012993.2
carbon-nitrogen hydrolase family protein
COORDINATES: protein motif:HMM:TIGR00585.2
GO:0006298 - mismatch repair [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_001261764.1
GO:0004549 - tRNA-specific ribonuclease activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF011397.0
GO:0047429 - nucleoside triphosphate diphosphatase activity [Evidence IEA]
GO:0009143 - nucleoside triphosphate catabolic process [Evidence IEA]
COORDINATES: protein motif:HMM:NF024242.2
COORDINATES: protein motif:HMM:NF038196.1
N-terminal region resembles flavodoxins. C-terminal ferrodoxin region binds two 4Fe-4S clusters; Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: similar to AA sequence:RefSeq:WP_014808996.1
COORDINATES: protein motif:HMM:NF013254.2
COORDINATES: protein motif:HMM:TIGR03471.1
hopanoid biosynthesis associated radical SAM protein HpnJ
COORDINATES: protein motif:HMM:TIGR03473.1
hopanoid biosynthesis-associated protein HpnK
COORDINATES: protein motif:HMM:TIGR00591.1
COORDINATES: protein motif:HMM:NF015436.2
COORDINATES: protein motif:HMM:TIGR03330.1
GO:0004014 - adenosylmethionine decarboxylase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011418088.1
GO:0004635 - phosphoribosyl-AMP cyclohydrolase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_014809516.1
GO:0003879 - ATP phosphoribosyltransferase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF037660.2
COORDINATES: protein motif:HMM:NF013046.2
COORDINATES: similar to AA sequence:RefSeq:WP_011416198.1
COORDINATES: protein motif:HMM:NF021600.2
VPLPA-CTERM sorting domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_011417139.1
GO:0008734 - L-aspartate oxidase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF036294.2
COORDINATES: protein motif:HMM:NF012596.2
COORDINATES: protein motif:HMM:NF015556.2
COORDINATES: similar to AA sequence:RefSeq:WP_014809506.1
COORDINATES: similar to AA sequence:RefSeq:WP_014809507.1
GO:0008878 - glucose-1-phosphate adenylyltransferase activity [Evidence IEA]
GO:0005978 - glycogen biosynthetic process [Evidence IEA]
COORDINATES: protein motif:HMM:NF012521.2
GO:0043755 - alpha-ribazole phosphatase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_013705085.1
COORDINATES: protein motif:HMM:NF014713.2
COORDINATES: protein motif:HMM:NF015715.2
COORDINATES: protein motif:HMM:NF033788.1
metalloregulator ArsR/SmtB family transcription factor
COORDINATES: protein motif:HMM:NF010589.0
COORDINATES: protein motif:HMM:NF013713.2
internal stop; Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: protein motif:HMM:NF012799.2
COORDINATES: protein motif:HMM:NF019887.2
COORDINATES: protein motif:HMM:TIGR00589.1
methylated-DNA--[protein]-cysteine S-methyltransferase
COORDINATES: similar to AA sequence:RefSeq:WP_011417502.1
GO:0046429 - 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase activity [Evidence IEA]
GO:0044237 - cellular metabolic process [Evidence IEA]
flavodoxin-dependent (E)-4-hydroxy-3-methylbut-2-enyl-diphosphate synthase
COORDINATES: protein motif:HMM:NF006367.0
GO:0009317 - acetyl-CoA carboxylase complex [Evidence IEA]
GO:0003989 - acetyl-CoA carboxylase activity [Evidence IEA]; GO:0004075 - biotin carboxylase activity [Evidence IEA]
acetyl-CoA carboxylase biotin carboxylase subunit
COORDINATES: protein motif:HMM:NF012885.2
COORDINATES: protein motif:HMM:TIGR04336.1
COORDINATES: protein motif:HMM:NF017496.2
COORDINATES: protein motif:HMM:NF001989.1
COORDINATES: similar to AA sequence:RefSeq:WP_014809499.1
GO:0042242 - cobyrinic acid a,c-diamide synthase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_014809414.1
GO:0018551 - hydrogensulfite reductase activity [Evidence IEA]
GO:0019420 - dissimilatory sulfate reduction [Evidence IEA]
dissimilatory-type sulfite reductase subunit beta
COORDINATES: similar to AA sequence:RefSeq:WP_014809415.1
dissimilatory-type sulfite reductase subunit alpha
COORDINATES: protein motif:HMM:NF016292.2
ABC transporter substrate binding protein
COORDINATES: similar to AA sequence:RefSeq:WP_014811886.1
GO:0009306 - protein secretion [Evidence IEA]; GO:0006465 - signal peptide processing [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011417461.1
COORDINATES: protein motif:HMM:NF024811.2
COORDINATES: protein motif:HMM:NF011068.0
GO:0032324 - molybdopterin cofactor biosynthetic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_015703970.1
GO:0008761 - UDP-N-acetylglucosamine 2-epimerase activity [Evidence IEA]
UDP-N-acetylglucosamine 2-epimerase (non-hydrolyzing)
COORDINATES: similar to AA sequence:RefSeq:WP_013706596.1
COORDINATES: protein motif:HMM:NF027681.2
COORDINATES: protein motif:HMM:NF014453.2
COORDINATES: protein motif:HMM:NF025104.2
COORDINATES: similar to AA sequence:RefSeq:WP_013706603.1
COORDINATES: similar to AA sequence:RefSeq:WP_013706602.1
COORDINATES: similar to AA sequence:RefSeq:WP_013706600.1
COORDINATES: protein motif:HMM:TIGR03006.1
COORDINATES: protein motif:HMM:NF014686.2
COORDINATES: protein motif:HMM:NF024660.2
COORDINATES: similar to AA sequence:RefSeq:WP_014810994.1
COORDINATES: protein motif:HMM:NF024914.2
COORDINATES: protein motif:HMM:NF016876.2
type II toxin-antitoxin system mRNA interferase toxin, RelE/StbE family
COORDINATES: similar to AA sequence:RefSeq:WP_011415996.1
GO:0016836 - hydro-lyase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_016293276.1
GO:0016829 - lyase activity [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR02074.1
GO:0008658 - penicillin binding [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011416106.1
GO:0009332 - glutamate-tRNA ligase complex [Evidence IEA]
GO:0004818 - glutamate-tRNA ligase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF015047.2
GO:0018580 - nitronate monooxygenase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF015325.2
COORDINATES: protein motif:HMM:NF028488.2
COORDINATES: protein motif:HMM:NF012402.2
COORDINATES: protein motif:HMM:NF013242.2
COORDINATES: protein motif:HMM:NF012592.2
COORDINATES: protein motif:HMM:NF016843.2
COORDINATES: protein motif:HMM:NF016246.2
COORDINATES: similar to AA sequence:RefSeq:WP_013705326.1
COORDINATES: protein motif:HMM:NF019958.2
COORDINATES: protein motif:HMM:NF014796.2
COORDINATES: protein motif:HMM:NF019128.2
COORDINATES: similar to AA sequence:RefSeq:WP_011416504.1
COORDINATES: protein motif:HMM:TIGR02578.1
type III-A CRISPR-associated protein Cas10/Csm1
COORDINATES: protein motif:HMM:NF015695.2
type III-A CRISPR-associated protein Csm2
COORDINATES: protein motif:HMM:TIGR02582.1
type III-A CRISPR-associated RAMP protein Csm3
COORDINATES: protein motif:HMM:TIGR01899.1
type III-A CRISPR-associated RAMP protein Csm5
COORDINATES: protein motif:HMM:NF021189.2
COORDINATES: protein motif:HMM:NF040559.1
COORDINATES: protein motif:HMM:NF021006.2
TIGR02221 family CRISPR-associated protein
COORDINATES: protein motif:HMM:NF040561.1
CRISPR-associated primase-polymerase type A1
COORDINATES: protein motif:HMM:TIGR02436.1
COORDINATES: similar to AA sequence:RefSeq:WP_013706266.1
COORDINATES: protein motif:HMM:NF017451.2
COORDINATES: similar to AA sequence:RefSeq:WP_014594305.1
COORDINATES: similar to AA sequence:RefSeq:WP_011416812.1
COORDINATES: similar to AA sequence:RefSeq:WP_011416093.1
GO:0004823 - leucine-tRNA ligase activity [Evidence IEA]
GO:0006429 - leucyl-tRNA aminoacylation [Evidence IEA]
COORDINATES: protein motif:HMM:NF016290.2
GO:0043165 - Gram-negative-bacterium-type cell outer membrane assembly [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR01128.1
COORDINATES: protein motif:HMM:TIGR00029.2
COORDINATES: protein motif:HMM:NF040786.1
selenium metabolism-associated LysR family transcriptional regulator
COORDINATES: protein motif:HMM:NF013053.2
COORDINATES: similar to AA sequence:RefSeq:WP_014812698.1
COORDINATES: protein motif:HMM:NF013741.2
COORDINATES: protein motif:HMM:TIGR00299.1
nickel pincer cofactor biosynthesis protein LarC
COORDINATES: similar to AA sequence:RefSeq:WP_013706201.1
COORDINATES: similar to AA sequence:RefSeq:WP_014810046.1
COORDINATES: similar to AA sequence:RefSeq:WP_013705081.1
COORDINATES: similar to AA sequence:RefSeq:WP_013706210.1
COORDINATES: protein motif:HMM:NF013756.2
COORDINATES: similar to AA sequence:RefSeq:WP_010879172.1
COORDINATES: protein motif:HMM:NF012975.2
ribonuclease catalytic domain-containing protein
COORDINATES: protein motif:HMM:NF024258.2
COORDINATES: protein motif:HMM:NF024698.2
COORDINATES: protein motif:HMM:TIGR01007.1
GO:0045226 - extracellular polysaccharide biosynthetic process [Evidence IEA]
polysaccharide biosynthesis tyrosine autokinase
COORDINATES: protein motif:HMM:NF021589.2
COORDINATES: protein motif:HMM:NF015649.2
tetratricopeptide repeat-containing serine protease family protein
COORDINATES: protein motif:HMM:NF014417.2
COORDINATES: similar to AA sequence:RefSeq:WP_013705304.1
COORDINATES: protein motif:HMM:NF012944.2
COORDINATES: similar to AA sequence:RefSeq:WP_014812671.1
COORDINATES: protein motif:HMM:NF014433.2
COORDINATES: protein motif:HMM:NF016976.2
COORDINATES: similar to AA sequence:RefSeq:WP_014812668.1
COORDINATES: similar to AA sequence:RefSeq:WP_014812667.1
COORDINATES: similar to AA sequence:RefSeq:WP_014812665.1
GO:0031412 - gas vesicle organization [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_014812664.1
COORDINATES: similar to AA sequence:RefSeq:WP_020503491.1
There are 14 genes on the gvp gene cluster in halophilic archaea. The product of gvpA is a structural component of gas vesicles, which provide buoyancy to cells and promote flotation. It has been reported that the products of gvpAO and gvpFGJKLM represent the minimal set required for gas vesicle formation in halophilic archaea; Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: similar to AA sequence:RefSeq:WP_014812659.1
COORDINATES: protein motif:HMM:NF018129.2
COORDINATES: similar to AA sequence:RefSeq:WP_014812656.1
COORDINATES: similar to AA sequence:RefSeq:WP_014812655.1
COORDINATES: similar to AA sequence:RefSeq:WP_014810073.1
COORDINATES: similar to AA sequence:RefSeq:WP_014812653.1
COORDINATES: protein motif:HMM:NF008686.0
cyclopropane fatty acyl phospholipid synthase
COORDINATES: protein motif:HMM:NF016845.2
phage tail sheath subtilisin-like domain-containing protein
COORDINATES: protein motif:HMM:TIGR02241.1
COORDINATES: protein motif:HMM:NF025431.2
COORDINATES: protein motif:HMM:NF025078.2
COORDINATES: protein motif:HMM:NF016595.2
COORDINATES: protein motif:HMM:NF016829.2
COORDINATES: protein motif:HMM:NF024627.2
right-handed parallel beta-helix repeat-containing protein
COORDINATES: protein motif:HMM:NF022841.2
COORDINATES: protein motif:HMM:TIGR00048.1
GO:0016433 - rRNA (adenine) methyltransferase activity [Evidence IEA]; GO:0008757 - S-adenosylmethionine-dependent methyltransferase activity [Evidence IEA]
GO:0031167 - rRNA methylation [Evidence IEA]
23S rRNA (adenine(2503)-C(2))-methyltransferase RlmN
COORDINATES: similar to AA sequence:RefSeq:WP_014810378.1
GO:0019899 - enzyme binding [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_014810716.1
cyclic pyranopterin monophosphate synthase MoaC
COORDINATES: protein motif:HMM:NF013705.2
COORDINATES: similar to AA sequence:RefSeq:WP_011418310.1
2-oxoacid:acceptor oxidoreductase subunit alpha
COORDINATES: protein motif:HMM:NF024585.2
COORDINATES: protein motif:HMM:TIGR00566.1
aminodeoxychorismate/anthranilate synthase component II
COORDINATES: similar to AA sequence:RefSeq:WP_011417726.1
GO:0004049 - anthranilate synthase activity [Evidence IEA]
GO:0000162 - tryptophan biosynthetic process [Evidence IEA]
carbon monoxide dehydrogenase accessory protein CooC
COORDINATES: similar to AA sequence:RefSeq:WP_011417186.1
COORDINATES: protein motif:HMM:NF014114.2
COORDINATES: protein motif:HMM:NF024629.2
COORDINATES: similar to AA sequence:RefSeq:WP_013706955.1
COORDINATES: similar to AA sequence:RefSeq:WP_014813225.1
COORDINATES: similar to AA sequence:RefSeq:WP_013706961.1
COORDINATES: protein motif:HMM:NF022766.2
COORDINATES: protein motif:HMM:NF012673.2
COORDINATES: protein motif:HMM:NF014046.2
COORDINATES: protein motif:HMM:NF013094.2
COORDINATES: similar to AA sequence:RefSeq:WP_001298109.1
COORDINATES: protein motif:HMM:NF024841.2
esterase-like activity of phytase family protein
COORDINATES: protein motif:HMM:NF013412.2
pyridoxamine 5'-phosphate oxidase family protein
COORDINATES: protein motif:HMM:NF024897.2
GO:0004642 - phosphoribosylformylglycinamidine synthase activity [Evidence IEA]
phosphoribosylformylglycinamidine synthase I
COORDINATES: protein motif:HMM:NF009583.0
GO:0031522 - cell envelope Sec protein transport complex [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011416277.1
COORDINATES: similar to AA sequence:RefSeq:WP_014808084.1
COORDINATES: protein motif:HMM:NF024754.2
COORDINATES: similar to AA sequence:RefSeq:WP_014810420.1
GO:0004851 - uroporphyrin-III C-methyltransferase activity [Evidence IEA]
GO:0019354 - siroheme biosynthetic process [Evidence IEA]
uroporphyrinogen-III C-methyltransferase
COORDINATES: similar to AA sequence:RefSeq:WP_011416656.1
COORDINATES: similar to AA sequence:RefSeq:WP_014811813.1
COORDINATES: similar to AA sequence:RefSeq:WP_001020786.1
GO:0005524 - ATP binding [Evidence IEA]; GO:0003824 - catalytic activity [Evidence IEA]; GO:0046872 - metal ion binding [Evidence IEA]
ADP-forming succinate--CoA ligase subunit beta
COORDINATES: protein motif:HMM:NF016850.2
COORDINATES: similar to AA sequence:RefSeq:WP_014810637.1
UDP-N-acetylglucosamine 4,6-dehydratase (inverting)
COORDINATES: similar to AA sequence:RefSeq:WP_014810636.1
UDP-4-amino-4, 6-dideoxy-N-acetyl-beta-L-altrosamine transaminase
COORDINATES: protein motif:HMM:NF015087.2
GO:0016051 - carbohydrate biosynthetic process [Evidence IEA]
N-acetylneuraminate synthase family protein
COORDINATES: protein motif:HMM:NF014409.2
acylneuraminate cytidylyltransferase family protein
COORDINATES: protein motif:HMM:TIGR03590.1
GO:0016758 - hexosyltransferase activity [Evidence IEA]
UDP-2,4-diacetamido-2,4, 6-trideoxy-beta-L-altropyranose hydrolase
COORDINATES: similar to AA sequence:RefSeq:WP_014809567.1
GO:0016765 - transferase activity, transferring alkyl or aryl (other than methyl) groups [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR01855.1
COORDINATES: protein motif:HMM:NF013168.2
imidazole glycerol phosphate synthase cyclase subunit
COORDINATES: protein motif:HMM:TIGR03573.1
COORDINATES: protein motif:HMM:TIGR03587.1
COORDINATES: protein motif:HMM:TIGR04396.1
COORDINATES: protein motif:HMM:NF014589.2
COORDINATES: protein motif:HMM:NF018696.2
COORDINATES: protein motif:HMM:TIGR02201.1
putative lipopolysaccharide heptosyltransferase III
COORDINATES: similar to AA sequence:RefSeq:WP_011416645.1
GO:0042578 - phosphoric ester hydrolase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_014458490.1
GO:0006402 - mRNA catabolic process [Evidence IEA]
COORDINATES: nucleotide motif:Rfam:14.4:RF00013
Derived by automated computational analysis using gene prediction method: cmsearch.
COORDINATES: protein motif:HMM:NF017786.2
GO:0090529 - cell septum assembly [Evidence IEA]; GO:0043093 - FtsZ-dependent cytokinesis [Evidence IEA]
COORDINATES: protein motif:HMM:NF012434.2
COORDINATES: protein motif:HMM:NF018010.2
COORDINATES: similar to AA sequence:RefSeq:WP_000290787.1
COORDINATES: protein motif:HMM:NF024903.2
COORDINATES: protein motif:HMM:NF014619.2
COORDINATES: protein motif:HMM:TIGR00067.1
GO:0008881 - glutamate racemase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF013245.2
COORDINATES: protein motif:HMM:TIGR00341.1
COORDINATES: similar to AA sequence:RefSeq:WP_001837006.1
GO:0005524 - ATP binding [Evidence IEA]; GO:0003677 - DNA binding [Evidence IEA]; GO:0009378 - four-way junction helicase activity [Evidence IEA]
GO:0006310 - DNA recombination [Evidence IEA]; GO:0006281 - DNA repair [Evidence IEA]
Holliday junction branch migration DNA helicase RuvB
COORDINATES: similar to AA sequence:RefSeq:WP_011417740.1
COORDINATES: similar to AA sequence:RefSeq:WP_011417741.1
toxin-antitoxin system HicB family antitoxin
COORDINATES: similar to AA sequence:RefSeq:WP_011417395.1
COORDINATES: similar to AA sequence:RefSeq:WP_014810404.1
GO:0016887 - ATP hydrolysis activity [Evidence IEA]; GO:0005515 - protein binding [Evidence IEA]
60 kDa chaperone family; promotes refolding of misfolded polypeptides especially under stressful conditions; forms two stacked rings of heptamers to form a barrel-shaped 14mer; ends can be capped by GroES; misfolded proteins enter the barrel where they are refolded when GroES binds; Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: similar to AA sequence:RefSeq:WP_014811955.1
COORDINATES: protein motif:HMM:NF013753.2
COORDINATES: similar to AA sequence:RefSeq:WP_001247892.1
COORDINATES: similar to AA sequence:RefSeq:WP_001293886.1
COORDINATES: similar to AA sequence:RefSeq:WP_007462595.1
COORDINATES: protein motif:HMM:NF013555.2
GO:0003677 - DNA binding [Evidence IEA]; GO:0003916 - DNA topoisomerase activity [Evidence IEA]
topoisomerase DNA-binding C4 zinc finger domain-containing protein
COORDINATES: protein motif:HMM:NF037501.2
Swt1 family HEPN domain-containing protein
COORDINATES: protein motif:HMM:NF012534.2
COORDINATES: protein motif:HMM:NF017416.2
COORDINATES: similar to AA sequence:RefSeq:WP_013705092.1
COORDINATES: similar to AA sequence:RefSeq:WP_013705879.1
COORDINATES: similar to AA sequence:RefSeq:WP_013705878.1
COORDINATES: similar to AA sequence:RefSeq:WP_013706940.1
COORDINATES: protein motif:HMM:NF021493.2
COORDINATES: similar to AA sequence:RefSeq:WP_011417200.1
COORDINATES: protein motif:HMM:NF024816.2
type II and III secretion system protein family protein
COORDINATES: protein motif:HMM:NF018961.2
COORDINATES: protein motif:HMM:NF003246.0
GO:0003963 - RNA-3'-phosphate cyclase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_013705445.1
COORDINATES: protein motif:HMM:NF014757.2
GO:0070403 - NAD+ binding [Evidence IEA]
GO:0006631 - fatty acid metabolic process [Evidence IEA]
3-hydroxyacyl-CoA dehydrogenase NAD-binding domain-containing protein
COORDINATES: protein motif:HMM:NF015316.2
outer membrane protein transport protein
COORDINATES: similar to AA sequence:RefSeq:WP_013705748.1
COORDINATES: protein motif:HMM:NF017864.2
COORDINATES: similar to AA sequence:RefSeq:WP_014811781.1
lipopolysaccharide assembly protein LapA domain-containing protein
COORDINATES: protein motif:HMM:TIGR01070.1
GO:0005524 - ATP binding [Evidence IEA]; GO:0030983 - mismatched DNA binding [Evidence IEA]
COORDINATES: protein motif:HMM:NF004226.0
GO:0008408 - 3'-5' exonuclease activity [Evidence IEA]; GO:0003676 - nucleic acid binding [Evidence IEA]
COORDINATES: protein motif:HMM:NF003377.0
acetyl-CoA decarbonylase/synthase complex subunit delta
COORDINATES: similar to AA sequence:RefSeq:WP_013706988.1
COORDINATES: similar to AA sequence:RefSeq:WP_014808136.1
acetyl-CoA decarbonylase/synthase complex subunit alpha/beta
COORDINATES: similar to AA sequence:RefSeq:WP_014808135.1
acetyl-CoA decarbonylase/synthase complex subunit gamma
COORDINATES: similar to AA sequence:RefSeq:WP_014808134.1
COORDINATES: protein motif:HMM:NF037785.2
COORDINATES: similar to AA sequence:RefSeq:WP_011417762.1
COORDINATES: similar to AA sequence:RefSeq:WP_014807966.1
COORDINATES: protein motif:HMM:NF012389.2
COORDINATES: similar to AA sequence:RefSeq:WP_014807964.1
GO:0004807 - triose-phosphate isomerase activity [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR00810.1
COORDINATES: protein motif:HMM:NF024935.2
COORDINATES: protein motif:HMM:NF018050.2
COORDINATES: protein motif:HMM:NF006822.0
GO:0004612 - phosphoenolpyruvate carboxykinase (ATP) activity [Evidence IEA]
GO:0006094 - gluconeogenesis [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_013706437.1
COORDINATES: protein motif:HMM:NF014683.2
GO:0015129 - lactate transmembrane transporter activity [Evidence IEA]
GO:0015727 - lactate transport [Evidence IEA]
COORDINATES: protein motif:HMM:NF016311.2
3-deoxy-D-manno-octulosonic acid transferase
COORDINATES: protein motif:HMM:NF022607.2
COORDINATES: protein motif:HMM:NF022137.2
class I SAM-dependent rRNA methyltransferase
COORDINATES: similar to AA sequence:RefSeq:WP_014811727.1
COORDINATES: protein motif:HMM:NF024247.2
COORDINATES: similar to AA sequence:RefSeq:WP_013706877.1
COORDINATES: protein motif:HMM:TIGR04337.1
COORDINATES: protein motif:HMM:TIGR00092.1
COORDINATES: protein motif:HMM:NF039185.1
COORDINATES: protein motif:HMM:TIGR02199.1
D-glycero-beta-D-manno-heptose 1-phosphate adenylyltransferase
COORDINATES: protein motif:HMM:NF015049.2
COORDINATES: protein motif:HMM:NF013856.2
COORDINATES: similar to AA sequence:RefSeq:WP_011416652.1
YebC/PmpR family DNA-binding transcriptional regulator
COORDINATES: protein motif:HMM:TIGR00228.1
GO:0008821 - crossover junction endodeoxyribonuclease activity [Evidence IEA]
crossover junction endodeoxyribonuclease RuvC
COORDINATES: protein motif:HMM:TIGR00084.1
GO:0009379 - Holliday junction helicase complex [Evidence IEA]
GO:0009378 - four-way junction helicase activity [Evidence IEA]
Holliday junction branch migration protein RuvA
COORDINATES: protein motif:HMM:NF040521.1
C45 family autoproteolytic acyltransferase/hydolase
COORDINATES: similar to AA sequence:RefSeq:WP_016290713.1
COORDINATES: protein motif:HMM:NF040320.1
COORDINATES: similar to AA sequence:RefSeq:WP_013706789.1
COORDINATES: similar to AA sequence:RefSeq:WP_013706790.1
COORDINATES: similar to AA sequence:RefSeq:WP_011416992.1
COORDINATES: protein motif:HMM:NF012766.2
COORDINATES: protein motif:HMM:NF003242.0
cofactor-independent phosphoglycerate mutase
COORDINATES: similar to AA sequence:RefSeq:WP_014809552.1
COORDINATES: similar to AA sequence:RefSeq:WP_014809551.1
aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme
COORDINATES: protein motif:HMM:NF024406.2
IS66 family transposase zinc-finger binding domain-containing protein
COORDINATES: protein motif:HMM:NF016532.2
COORDINATES: protein motif:HMM:TIGR01035.1
GO:0008883 - glutamyl-tRNA reductase activity [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR03144.1
GO:0020037 - heme binding [Evidence IEA]
GO:0017004 - cytochrome complex assembly [Evidence IEA]
c-type cytochrome biogenesis protein CcsB
COORDINATES: protein motif:HMM:TIGR01470.1
bifunctional precorrin-2 dehydrogenase/sirohydrochlorin ferrochelatase
COORDINATES: protein motif:HMM:NF024057.2
COORDINATES: protein motif:HMM:NF012318.2
trypsin-like peptidase domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_014809530.1
alcohol dehydrogenase catalytic domain-containing protein
COORDINATES: protein motif:HMM:TIGR00325.1
GO:0008759 - UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase activity [Evidence IEA]
UDP-3-O-acyl-N-acetylglucosamine deacetylase
tRNA (N(6)-L-threonylcarbamoyladenosine(37)-C(2))- methylthiotransferase MtaB
COORDINATES: protein motif:HMM:TIGR00420.1
GO:0016783 - sulfurtransferase activity [Evidence IEA]; GO:0016740 - transferase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF018894.2
COORDINATES: similar to AA sequence:RefSeq:WP_013706908.1
COORDINATES: protein motif:HMM:NF015722.2
formylglycine-generating enzyme family protein
COORDINATES: protein motif:HMM:NF016348.2
GO:0061024 - membrane organization [Evidence IEA]; GO:0010033 - response to organic substance [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_014811288.1
COORDINATES: protein motif:HMM:NF010568.0
GO:0004639 - phosphoribosylaminoimidazolesuccinocarboxamide synthase activity [Evidence IEA]
phosphoribosylaminoimidazolesuccinocarboxamide synthase
COORDINATES: protein motif:HMM:NF019334.2
COORDINATES: protein motif:HMM:NF020855.2
COORDINATES: protein motif:HMM:NF012345.2
COORDINATES: similar to AA sequence:RefSeq:WP_012471001.1
YeeE/YedE thiosulfate transporter family protein
COORDINATES: similar to AA sequence:RefSeq:WP_011418816.1
COORDINATES: similar to AA sequence:RefSeq:WP_000301556.1
GO:0004619 - phosphoglycerate mutase activity [Evidence IEA]
2,3-diphosphoglycerate-dependent phosphoglycerate mutase
COORDINATES: similar to AA sequence:RefSeq:WP_013707185.1
COORDINATES: similar to AA sequence:RefSeq:WP_016290306.1
GO:0006950 - response to stress [Evidence IEA]; GO:0006412 - translation [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_014809736.1
COORDINATES: protein motif:HMM:NF003323.0
COORDINATES: protein motif:HMM:TIGR01494.1
GO:0005524 - ATP binding [Evidence IEA]; GO:0016887 - ATP hydrolysis activity [Evidence IEA]; GO:0005215 - transporter activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_014808321.1
GO:0015299 - solute:proton antiporter activity [Evidence IEA]
GO:0006812 - cation transport [Evidence IEA]; GO:0055085 - transmembrane transport [Evidence IEA]
monovalent cation:proton antiporter family protein
COORDINATES: similar to AA sequence:RefSeq:WP_013706289.1
N-acyl homoserine lactonase family protein
COORDINATES: similar to AA sequence:RefSeq:WP_003245645.1
COORDINATES: protein motif:HMM:NF025001.2
COORDINATES: similar to AA sequence:RefSeq:WP_013707026.1
COORDINATES: similar to AA sequence:RefSeq:WP_013707025.1
COORDINATES: similar to AA sequence:RefSeq:WP_011417159.1
signal recognition particle sRNA large type
COORDINATES: nucleotide motif:Rfam:14.4:RF01854
COORDINATES: similar to AA sequence:RefSeq:WP_011416741.1
GO:0003883 - CTP synthase activity [Evidence IEA]
GO:0006241 - CTP biosynthetic process [Evidence IEA]; GO:0006221 - pyrimidine nucleotide biosynthetic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_012364209.1
GO:0008676 - 3-deoxy-8-phosphooctulonate synthase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011417117.1
COORDINATES: protein motif:HMM:TIGR04409.1
LPS export ABC transporter periplasmic protein LptC
COORDINATES: protein motif:HMM:NF015901.2
COORDINATES: protein motif:HMM:TIGR04406.1
GO:0043190 - ATP-binding cassette (ABC) transporter complex [Evidence IEA]; GO:0009898 - cytoplasmic side of plasma membrane [Evidence IEA]
GO:0042626 - ATPase-coupled transmembrane transporter activity [Evidence IEA]; GO:0015221 - lipopolysaccharide transmembrane transporter activity [Evidence IEA]
LPS export ABC transporter ATP-binding protein
COORDINATES: similar to AA sequence:RefSeq:WP_011417121.1
GO:0016987 - sigma factor activity [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR00741.1
GO:0022626 - cytosolic ribosome [Evidence IEA]; GO:0005840 - ribosome [Evidence IEA]
GO:0045182 - translation regulator activity [Evidence IEA]
GO:0009386 - translational attenuation [Evidence IEA]
ribosome-associated translation inhibitor RaiA
COORDINATES: similar to AA sequence:RefSeq:WP_011417123.1
COORDINATES: protein motif:HMM:NF015620.2
COORDINATES: protein motif:HMM:NF015567.2
COORDINATES: protein motif:HMM:TIGR01575.1
GO:0008999 - ribosomal protein S5-alanine alpha-N-acetyltransferase activity [Evidence IEA]
GO:0036211 - protein modification process [Evidence IEA]; GO:0042254 - ribosome biogenesis [Evidence IEA]
ribosomal protein S18-alanine N-acetyltransferase
COORDINATES: similar to AA sequence:RefSeq:WP_014810576.1
COORDINATES: similar to AA sequence:RefSeq:WP_014810575.1
GO:0008137 - NADH dehydrogenase (ubiquinone) activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_014810574.1
COORDINATES: similar to AA sequence:RefSeq:WP_018036038.1
COORDINATES: similar to AA sequence:RefSeq:WP_014810571.1
COORDINATES: similar to AA sequence:RefSeq:WP_014810570.1
COORDINATES: protein motif:HMM:NF012602.2
COORDINATES: similar to AA sequence:RefSeq:WP_014810562.1
COORDINATES: similar to AA sequence:RefSeq:WP_003874821.1
COORDINATES: similar to AA sequence:RefSeq:WP_014810559.1
COORDINATES: protein motif:HMM:NF010120.0
COORDINATES: similar to AA sequence:RefSeq:WP_012022184.1
fructose-1,6-bisphosphate aldolase/phosphatase
COORDINATES: protein motif:HMM:NF026048.2
COORDINATES: similar to AA sequence:RefSeq:WP_013705691.1
COORDINATES: similar to AA sequence:RefSeq:WP_013705648.1
COORDINATES: similar to AA sequence:RefSeq:WP_013706212.1
COORDINATES: protein motif:HMM:NF013760.2
COORDINATES: protein motif:HMM:NF014525.2
COORDINATES: protein motif:HMM:NF015980.2
COORDINATES: protein motif:HMM:TIGR02794.1
GO:0031237 - intrinsic component of periplasmic side of plasma membrane [Evidence IEA]
GO:0015078 - proton transmembrane transporter activity [Evidence IEA]
GO:0061024 - membrane organization [Evidence IEA]; GO:1902600 - proton transmembrane transport [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_014807995.1
COORDINATES: protein motif:HMM:NF015048.2
COORDINATES: protein motif:HMM:NF014629.2
23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH
COORDINATES: similar to AA sequence:RefSeq:WP_011417691.1
COORDINATES: protein motif:HMM:NF016300.2
The SIMPL domain is named for its presence in mouse protein SIMPL (signalling molecule that associates with mouse pelle-like kinase). Bacterial member BP26, from Brucella, was shown to assemble into a channel-like structure, while YggE from E. coli has been associated with resistance to oxidative stress; Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: protein motif:HMM:TIGR00557.1
GO:0050570 - 4-hydroxythreonine-4-phosphate dehydrogenase activity [Evidence IEA]
GO:0008615 - pyridoxine biosynthetic process [Evidence IEA]
4-hydroxythreonine-4-phosphate dehydrogenase PdxA
COORDINATES: similar to AA sequence:RefSeq:WP_011417137.1
GO:0004018 - N6-(1,2-dicarboxyethyl)AMP AMP-lyase (fumarate-forming) activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_000743900.1
GO:0005524 - ATP binding [Evidence IEA]; GO:0003922 - GMP synthase (glutamine-hydrolyzing) activity [Evidence IEA]; GO:0016462 - pyrophosphatase activity [Evidence IEA]
GO:0006177 - GMP biosynthetic process [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR00678.1
COORDINATES: protein motif:HMM:NF016361.2
COORDINATES: protein motif:HMM:NF015587.2
COORDINATES: protein motif:HMM:NF024927.2
COORDINATES: protein motif:HMM:NF018242.2
COORDINATES: similar to AA sequence:RefSeq:WP_011417637.1
GO:0004735 - pyrroline-5-carboxylate reductase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011417842.1
GO:0004514 - nicotinate-nucleotide diphosphorylase (carboxylating) activity [Evidence IEA]
GO:0019363 - pyridine nucleotide biosynthetic process [Evidence IEA]
carboxylating nicotinate-nucleotide diphosphorylase
COORDINATES: similar to AA sequence:RefSeq:WP_014808276.1
COORDINATES: similar to AA sequence:RefSeq:WP_014812031.1
GO:0004784 - superoxide dismutase activity [Evidence IEA]
GO:0019430 - removal of superoxide radicals [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR03710.1
COORDINATES: protein motif:HMM:TIGR02177.1
COORDINATES: similar to AA sequence:RefSeq:WP_011417291.1
COORDINATES: similar to AA sequence:RefSeq:WP_016292462.1
COORDINATES: similar to AA sequence:RefSeq:WP_014812040.1
COORDINATES: protein motif:HMM:NF012364.2
COORDINATES: protein motif:HMM:NF037096.2
COORDINATES: similar to AA sequence:RefSeq:WP_009459601.1
COORDINATES: similar to AA sequence:RefSeq:WP_013707405.1
COORDINATES: protein motif:HMM:TIGR00498.1
GO:0006282 - regulation of DNA repair [Evidence IEA]; GO:0006355 - regulation of DNA-templated transcription [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_014811633.1
COORDINATES: protein motif:HMM:NF017774.2
COORDINATES: protein motif:HMM:NF024183.2
COORDINATES: protein motif:HMM:NF006829.0
COORDINATES: protein motif:HMM:NF014680.2
COORDINATES: protein motif:HMM:TIGR00236.1
COORDINATES: protein motif:HMM:NF024832.2
COORDINATES: protein motif:HMM:NF012360.2
phenylacetate--CoA ligase family protein
COORDINATES: protein motif:HMM:NF019552.2
COORDINATES: similar to AA sequence:RefSeq:WP_013706452.1
COORDINATES: protein motif:HMM:NF014628.2
COORDINATES: protein motif:HMM:NF025010.2
COORDINATES: protein motif:HMM:NF024915.2
COORDINATES: protein motif:HMM:TIGR02802.1
peptidoglycan-associated lipoprotein Pal
COORDINATES: protein motif:HMM:NF014566.2
CPBP family intramembrane metalloprotease
COORDINATES: similar to AA sequence:RefSeq:WP_011418403.1
COORDINATES: protein motif:HMM:NF012790.2
rhodanese-like domain-containing protein
COORDINATES: protein motif:HMM:NF018942.2
COORDINATES: similar to AA sequence:RefSeq:WP_013705350.1
COORDINATES: similar to AA sequence:RefSeq:WP_013705348.1
COORDINATES: similar to AA sequence:RefSeq:WP_013705347.1
COORDINATES: similar to AA sequence:RefSeq:WP_013705346.1
COORDINATES: protein motif:HMM:TIGR01466.1
GO:0030789 - precorrin-3B C17-methyltransferase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF014006.2
COORDINATES: similar to AA sequence:RefSeq:WP_014813260.1
GO:0046026 - precorrin-4 C11-methyltransferase activity [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR02467.1
bifunctional cobalt-precorrin-7 (C(5))-methyltransferase/cobalt-precorrin-6B (C(15))-methyltransferase
COORDINATES: protein motif:HMM:NF000849.0
cobalt-precorrin-5B (C(1))-methyltransferase
COORDINATES: protein motif:HMM:TIGR01467.1
GO:0030788 - precorrin-2 C20-methyltransferase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF014612.2
COORDINATES: protein motif:HMM:TIGR00379.1
COORDINATES: protein motif:HMM:NF017944.2
COORDINATES: similar to AA sequence:RefSeq:WP_013706067.1
COORDINATES: similar to AA sequence:RefSeq:WP_014810042.1
COORDINATES: protein motif:HMM:NF012376.2
COORDINATES: protein motif:HMM:NF025217.2
COORDINATES: similar to AA sequence:RefSeq:WP_013707001.1
COORDINATES: similar to AA sequence:RefSeq:WP_013707659.1
GO:0008080 - N-acetyltransferase activity [Evidence IEA]
bifunctional acetyl coenzyme A synthetase (ADP forming), alpha domain/GNAT family N-acetyltransferase
COORDINATES: protein motif:HMM:NF021873.2
GO:0003729 - mRNA binding [Evidence IEA]
2-oxoisovalerate dehydrogenase E1 subunit beta
COORDINATES: protein motif:HMM:NF017757.2
COORDINATES: protein motif:HMM:NF013540.2
COORDINATES: similar to AA sequence:RefSeq:WP_014810897.1
GO:0003949 - 1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino]imidazole-4- carboxamide isomerase activity [Evidence IEA]
1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino]imidazole-4- carboxamide isomerase
COORDINATES: protein motif:HMM:TIGR03960.1
TIGR03960 family B12-binding radical SAM protein
COORDINATES: similar to AA sequence:RefSeq:WP_014809403.1
GO:0004540 - ribonuclease activity [Evidence IEA]
GO:0006401 - RNA catabolic process [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR00475.1
GO:0001514 - selenocysteine incorporation [Evidence IEA]; GO:0006414 - translational elongation [Evidence IEA]
selenocysteine-specific translation elongation factor
COORDINATES: protein motif:HMM:NF025091.2
isocitrate lyase/phosphoenolpyruvate mutase family protein
COORDINATES: protein motif:HMM:TIGR03297.1
GO:0033980 - phosphonopyruvate decarboxylase activity [Evidence IEA]
GO:0017000 - antibiotic biosynthetic process [Evidence IEA]
phosphocholine cytidylyltransferase family protein
COORDINATES: protein motif:HMM:NF010006.0
GO:0047304 - 2-aminoethylphosphonate-pyruvate transaminase activity [Evidence IEA]
GO:0019700 - organic phosphonate catabolic process [Evidence IEA]
2-aminoethylphosphonate--pyruvate transaminase
GO:0016780 - phosphotransferase activity, for other substituted phosphate groups [Evidence IEA]
COORDINATES: protein motif:HMM:NF015651.2
COORDINATES: similar to AA sequence:RefSeq:WP_011417525.1
COORDINATES: protein motif:HMM:NF013702.2
COORDINATES: protein motif:HMM:NF013382.2
GO:0052624 - 2-phytyl-1,4-naphthoquinone methyltransferase activity [Evidence IEA]
GO:0042372 - phylloquinone biosynthetic process [Evidence IEA]
bifunctional demethylmenaquinone methyltransferase/2-methoxy-6-polyprenyl-1,4-benzoquinol methylase UbiE
COORDINATES: similar to AA sequence:RefSeq:WP_041584935.1
bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/5,10-methylene-tetrahydrofolate cyclohydrolase
COORDINATES: protein motif:HMM:NF014678.2
COORDINATES: protein motif:HMM:NF013936.2
GO:0006629 - lipid metabolic process [Evidence IEA]
COORDINATES: protein motif:HMM:NF004160.0
GO:0003919 - FMN adenylyltransferase activity [Evidence IEA]
bifunctional riboflavin kinase/FAD synthetase
COORDINATES: protein motif:HMM:NF014617.2
COORDINATES: protein motif:HMM:TIGR01953.1
COORDINATES: similar to AA sequence:RefSeq:WP_041585107.1
COORDINATES: protein motif:HMM:NF016351.2
COORDINATES: protein motif:HMM:TIGR00082.1
GO:0019843 - rRNA binding [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR00431.1
GO:0004730 - pseudouridylate synthase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011275926.1
COORDINATES: similar to AA sequence:RefSeq:WP_011418567.1
GO:0004654 - polyribonucleotide nucleotidyltransferase activity [Evidence IEA]
polyribonucleotide nucleotidyltransferase
COORDINATES: similar to AA sequence:RefSeq:WP_014811556.1
COORDINATES: protein motif:HMM:NF019317.2
COORDINATES: protein motif:HMM:TIGR00043.2
GO:0046872 - metal ion binding [Evidence IEA]; GO:0004540 - ribonuclease activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_006762396.1
GO:0033856 - pyridoxine 5'-phosphate synthase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011418613.1
COORDINATES: similar to AA sequence:RefSeq:WP_013707690.1
COORDINATES: protein motif:HMM:NF015084.2
COORDINATES: similar to AA sequence:RefSeq:WP_011416569.1
phenylalanine--tRNA ligase subunit alpha
COORDINATES: similar to AA sequence:RefSeq:WP_012759783.1
COORDINATES: similar to AA sequence:RefSeq:WP_005950095.1
COORDINATES: similar to AA sequence:RefSeq:WP_000973215.1
COORDINATES: similar to AA sequence:RefSeq:WP_014809014.1
GO:0004829 - threonine-tRNA ligase activity [Evidence IEA]
GO:0006435 - threonyl-tRNA aminoacylation [Evidence IEA]
GO:0008641 - ubiquitin-like modifier activating enzyme activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF013933.2
COORDINATES: similar to AA sequence:RefSeq:WP_014812127.1
GO:0004632 - phosphopantothenate--cysteine ligase activity [Evidence IEA]; GO:0004633 - phosphopantothenoylcysteine decarboxylase activity [Evidence IEA]
GO:0015937 - coenzyme A biosynthetic process [Evidence IEA]; GO:0015939 - pantothenate metabolic process [Evidence IEA]
bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase CoaBC
COORDINATES: protein motif:HMM:TIGR00758.1
COORDINATES: similar to AA sequence:RefSeq:WP_014812125.1
COORDINATES: similar to AA sequence:RefSeq:WP_011417454.1
COORDINATES: similar to AA sequence:RefSeq:WP_014812725.1
Rho termination factor N-terminal domain-containing protein
COORDINATES: protein motif:HMM:TIGR01448.1
COORDINATES: protein motif:HMM:NF023395.2
COORDINATES: protein motif:HMM:NF013247.2
COORDINATES: protein motif:HMM:NF005482.0
GO:0047334 - diphosphate-fructose-6-phosphate 1-phosphotransferase activity [Evidence IEA]
diphosphate--fructose-6-phosphate 1-phosphotransferase
COORDINATES: protein motif:HMM:NF024245.2
helix-hairpin-helix domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_018113690.1
GO:0043714 - (R)-citramalate synthase activity [Evidence IEA]
GO:0009097 - isoleucine biosynthetic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_014810800.1
GO:0004072 - aspartate kinase activity [Evidence IEA]
GO:0009089 - lysine biosynthetic process via diaminopimelate [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR00608.1
COORDINATES: protein motif:HMM:NF015444.2
COORDINATES: protein motif:HMM:TIGR00587.1
GO:0003906 - DNA-(apurinic or apyrimidinic site) endonuclease activity [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR04408.1
LPS export ABC transporter permease LptG
COORDINATES: protein motif:HMM:NF012442.2
COORDINATES: protein motif:HMM:TIGR00915.1
GO:0055085 - transmembrane transport [Evidence IEA]; GO:0042908 - xenobiotic transport [Evidence IEA]
multidrug efflux RND transporter permease subunit
COORDINATES: protein motif:HMM:TIGR00763.1
COORDINATES: protein motif:HMM:TIGR00516.1
GO:0008897 - holo-[acyl-carrier-protein] synthase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF013255.2
COORDINATES: similar to AA sequence:RefSeq:WP_011417140.1
tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex transferase subunit TsaD
COORDINATES: protein motif:HMM:TIGR00613.1
COORDINATES: protein motif:HMM:NF013844.2
COORDINATES: protein motif:HMM:NF013316.2
COORDINATES: protein motif:HMM:TIGR00106.1
COORDINATES: similar to AA sequence:RefSeq:WP_014811034.1
COORDINATES: protein motif:HMM:NF021363.2
COORDINATES: protein motif:HMM:NF012616.2
GO:0000179 - rRNA (adenine-N6,N6-)-dimethyltransferase activity [Evidence IEA]
16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))- dimethyltransferase RsmA
COORDINATES: protein motif:HMM:NF016289.2
COORDINATES: similar to AA sequence:RefSeq:WP_011419043.1
COORDINATES: similar to AA sequence:RefSeq:WP_011419044.1
COORDINATES: protein motif:HMM:NF015823.2
COORDINATES: protein motif:HMM:NF012356.2
COORDINATES: protein motif:HMM:TIGR00378.1
GO:0015368 - calcium:cation antiporter activity [Evidence IEA]
GO:0006816 - calcium ion transport [Evidence IEA]
COORDINATES: protein motif:HMM:NF019500.2
COORDINATES: similar to AA sequence:RefSeq:WP_011416677.1
COORDINATES: similar to AA sequence:RefSeq:WP_011416678.1
COORDINATES: similar to AA sequence:RefSeq:WP_014809512.1
COORDINATES: similar to AA sequence:RefSeq:WP_014809513.1
COORDINATES: similar to AA sequence:RefSeq:WP_014811352.1
COORDINATES: similar to AA sequence:RefSeq:WP_014811351.1
GO:0003824 - catalytic activity [Evidence IEA]; GO:0030151 - molybdenum ion binding [Evidence IEA]; GO:0030170 - pyridoxal phosphate binding [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_014811368.1
MogA/MoaB family molybdenum cofactor biosynthesis protein
COORDINATES: similar to AA sequence:RefSeq:WP_011416659.1
GO:0005524 - ATP binding [Evidence IEA]; GO:0008986 - pyruvate, water dikinase activity [Evidence IEA]; GO:0016772 - transferase activity, transferring phosphorus-containing groups [Evidence IEA]
GO:0016310 - phosphorylation [Evidence IEA]; GO:0006090 - pyruvate metabolic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011417504.1
bifunctional (p)ppGpp synthetase/guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase
COORDINATES: similar to AA sequence:RefSeq:WP_014812721.1
GO:0002161 - aminoacyl-tRNA editing activity [Evidence IEA]; GO:0004812 - aminoacyl-tRNA ligase activity [Evidence IEA]; GO:0005524 - ATP binding [Evidence IEA]; GO:0000166 - nucleotide binding [Evidence IEA]; GO:0004827 - proline-tRNA ligase activity [Evidence IEA]
GO:0006433 - prolyl-tRNA aminoacylation [Evidence IEA]; GO:0006418 - tRNA aminoacylation for protein translation [Evidence IEA]
COORDINATES: protein motif:HMM:NF024873.2
ribonuclease H-like domain-containing protein
COORDINATES: protein motif:HMM:TIGR03790.1
COORDINATES: similar to AA sequence:RefSeq:WP_014808382.1
COORDINATES: protein motif:HMM:NF008506.0
COORDINATES: similar to AA sequence:RefSeq:WP_011418738.1
COORDINATES: similar to AA sequence:RefSeq:WP_014811075.1
COORDINATES: similar to AA sequence:RefSeq:WP_011417466.1
GO:0003677 - DNA binding [Evidence IEA]; GO:0003911 - DNA ligase (NAD+) activity [Evidence IEA]
GO:0006281 - DNA repair [Evidence IEA]; GO:0006260 - DNA replication [Evidence IEA]
COORDINATES: protein motif:HMM:NF011016.0
COORDINATES: protein motif:HMM:NF016764.2
COORDINATES: similar to AA sequence:RefSeq:WP_014808269.1
COORDINATES: protein motif:HMM:NF013736.2
COORDINATES: protein motif:HMM:TIGR00209.1
GO:0008108 - UDP-glucose:hexose-1-phosphate uridylyltransferase activity [Evidence IEA]
GO:0006012 - galactose metabolic process [Evidence IEA]
galactose-1-phosphate uridylyltransferase
COORDINATES: protein motif:HMM:NF015510.2
outer membrane lipoprotein carrier protein LolA
COORDINATES: similar to AA sequence:RefSeq:WP_011416808.1
GO:0051539 - 4 iron, 4 sulfur cluster binding [Evidence IEA]; GO:0008987 - quinolinate synthetase A activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF021445.2
phosphatidylglycerol lysyltransferase domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_011516280.1
hydrogenase expression/formation protein HypE
COORDINATES: similar to AA sequence:RefSeq:WP_011416574.1
COORDINATES: similar to AA sequence:RefSeq:WP_004398489.1
COORDINATES: protein motif:HMM:NF039482.1
COORDINATES: protein motif:HMM:TIGR00129.1
GO:0009061 - anaerobic respiration [Evidence IEA]; GO:0015942 - formate metabolic process [Evidence IEA]
formate dehydrogenase accessory sulfurtransferase FdhD
COORDINATES: similar to AA sequence:RefSeq:WP_013707111.1
GO:0005524 - ATP binding [Evidence IEA]; GO:0003677 - DNA binding [Evidence IEA]; GO:0016787 - hydrolase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011418371.1
COORDINATES: similar to AA sequence:RefSeq:WP_011416779.1
COORDINATES: similar to AA sequence:RefSeq:WP_014808123.1
zinc-dependent alcohol dehydrogenase family protein
COORDINATES: protein motif:HMM:NF024732.2
COORDINATES: protein motif:HMM:NF013226.2
COORDINATES: similar to AA sequence:RefSeq:WP_014812933.1
COORDINATES: protein motif:HMM:NF004046.0
GO:0005524 - ATP binding [Evidence IEA]; GO:0003677 - DNA binding [Evidence IEA]; GO:0003887 - DNA-directed DNA polymerase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_014812746.1
YbaB/EbfC family nucleoid-associated protein
COORDINATES: protein motif:HMM:TIGR00615.1
COORDINATES: similar to AA sequence:RefSeq:WP_011416539.1
COORDINATES: protein motif:HMM:NF012645.2
COORDINATES: protein motif:HMM:TIGR01144.1
GO:0000276 - mitochondrial proton-transporting ATP synthase complex, coupling factor F(o) [Evidence IEA]; GO:0045264 - plasma membrane proton-transporting ATP synthase complex, coupling factor F(o) [Evidence IEA]; GO:0045263 - proton-transporting ATP synthase complex, coupling factor F(o) [Evidence IEA]
GO:0046933 - proton-transporting ATP synthase activity, rotational mechanism [Evidence IEA]
GO:0015986 - proton motive force-driven ATP synthesis [Evidence IEA]
COORDINATES: protein motif:HMM:NF012439.2
GO:0000275 - mitochondrial proton-transporting ATP synthase complex, catalytic sector F(1) [Evidence IEA]; GO:0045262 - plasma membrane proton-transporting ATP synthase complex, catalytic core F(1) [Evidence IEA]; GO:0045261 - proton-transporting ATP synthase complex, catalytic core F(1) [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_016292873.1
COORDINATES: similar to AA sequence:RefSeq:WP_011416544.1
COORDINATES: similar to AA sequence:RefSeq:WP_014811478.1
COORDINATES: protein motif:HMM:NF009980.0
COORDINATES: protein motif:HMM:NF012873.2
COORDINATES: protein motif:HMM:NF013786.2
GO:0008897 - holo-[acyl-carrier-protein] synthase activity [Evidence IEA]; GO:0000287 - magnesium ion binding [Evidence IEA]
4'-phosphopantetheinyl transferase superfamily protein
COORDINATES: similar to AA sequence:RefSeq:WP_000071032.1
GO:0019134 - glucosamine-1-phosphate N-acetyltransferase activity [Evidence IEA]; GO:0000287 - magnesium ion binding [Evidence IEA]; GO:0003977 - UDP-N-acetylglucosamine diphosphorylase activity [Evidence IEA]
GO:0009252 - peptidoglycan biosynthetic process [Evidence IEA]; GO:0006048 - UDP-N-acetylglucosamine biosynthetic process [Evidence IEA]
bifunctional UDP-N-acetylglucosamine diphosphorylase/glucosamine-1-phosphate N-acetyltransferase GlmU
COORDINATES: protein motif:HMM:NF001484.0
GO:0004360 - glutamine-fructose-6-phosphate transaminase (isomerizing) activity [Evidence IEA]
GO:0006040 - amino sugar metabolic process [Evidence IEA]; GO:0009252 - peptidoglycan biosynthetic process [Evidence IEA]
glutamine--fructose-6-phosphate transaminase (isomerizing)
COORDINATES: protein motif:HMM:NF016777.2
COORDINATES: similar to AA sequence:RefSeq:WP_014809562.1
COORDINATES: protein motif:HMM:NF015338.2
endonuclease/exonuclease/phosphatase family protein
COORDINATES: similar to AA sequence:RefSeq:WP_014810366.1
COORDINATES: protein motif:HMM:NF015925.2
COORDINATES: similar to AA sequence:RefSeq:WP_014810358.1
GO:0004298 - threonine-type endopeptidase activity [Evidence IEA]
GO:0051603 - proteolysis involved in protein catabolic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_016448039.1
GO:0005524 - ATP binding [Evidence IEA]; GO:0016887 - ATP hydrolysis activity [Evidence IEA]; GO:0008233 - peptidase activity [Evidence IEA]
ATP-dependent protease ATPase subunit HslU
COORDINATES: similar to AA sequence:RefSeq:WP_011417327.1
GO:0003991 - acetylglutamate kinase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF002874.0
GO:0030170 - pyridoxal phosphate binding [Evidence IEA]; GO:0008483 - transaminase activity [Evidence IEA]
GO:0006525 - arginine metabolic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011417329.1
GO:0004585 - ornithine carbamoyltransferase activity [Evidence IEA]
GO:0042450 - arginine biosynthetic process via ornithine [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_014810880.1
GO:0004055 - argininosuccinate synthase activity [Evidence IEA]; GO:0005524 - ATP binding [Evidence IEA]
GO:0006526 - arginine biosynthetic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011417331.1
GO:0004056 - argininosuccinate lyase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011417333.1
GO:0008836 - diaminopimelate decarboxylase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011415985.1
GO:0008837 - diaminopimelate epimerase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_014810876.1
GO:0008840 - 4-hydroxy-tetrahydrodipicolinate synthase activity [Evidence IEA]
4-hydroxy-tetrahydrodipicolinate synthase
COORDINATES: similar to AA sequence:RefSeq:WP_014810875.1
GO:0008839 - 4-hydroxy-tetrahydrodipicolinate reductase [Evidence IEA]
4-hydroxy-tetrahydrodipicolinate reductase
COORDINATES: similar to AA sequence:RefSeq:WP_014810874.1
fumarylacetoacetate hydrolase family protein
COORDINATES: similar to AA sequence:RefSeq:WP_011417399.1
COORDINATES: similar to AA sequence:RefSeq:WP_011144094.1
COORDINATES: protein motif:HMM:TIGR01498.1
GO:0003848 - 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase activity [Evidence IEA]
2-amino-4-hydroxy-6- hydroxymethyldihydropteridine diphosphokinase
COORDINATES: protein motif:HMM:NF016811.2
COORDINATES: protein motif:HMM:TIGR00875.1
GO:0016832 - aldehyde-lyase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF012398.2
COORDINATES: similar to AA sequence:RefSeq:WP_014811029.1
COORDINATES: similar to AA sequence:RefSeq:WP_014811028.1
COORDINATES: protein motif:HMM:NF020400.2
COORDINATES: similar to AA sequence:RefSeq:WP_014812553.1
COORDINATES: protein motif:HMM:TIGR02442.1
COORDINATES: protein motif:HMM:NF004646.0
COORDINATES: similar to AA sequence:RefSeq:WP_014813150.1
COORDINATES: nucleotide motif:Rfam:14.4:RF00023
COORDINATES: protein motif:HMM:NF008121.0
COORDINATES: similar to AA sequence:RefSeq:WP_019868453.1
COORDINATES: protein motif:HMM:NF016825.2
cyclodeaminase/cyclohydrolase family protein
sensor domain-containing diguanylate cyclase
COORDINATES: similar to AA sequence:RefSeq:WP_014810377.1
GO:0016853 - isomerase activity [Evidence IEA]
KpsF/GutQ family sugar-phosphate isomerase
COORDINATES: similar to AA sequence:RefSeq:WP_013706209.1
COORDINATES: similar to AA sequence:RefSeq:WP_016290749.1
GO:0009316 - 3-isopropylmalate dehydratase complex [Evidence IEA]
GO:0003861 - 3-isopropylmalate dehydratase activity [Evidence IEA]
GO:0009098 - leucine biosynthetic process [Evidence IEA]
3-isopropylmalate dehydratase large subunit
COORDINATES: similar to AA sequence:RefSeq:WP_011418468.1
GO:0003852 - 2-isopropylmalate synthase activity [Evidence IEA]
GO:0019752 - carboxylic acid metabolic process [Evidence IEA]; GO:0009098 - leucine biosynthetic process [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR00473.1
GO:0003882 - CDP-diacylglycerol-serine O-phosphatidyltransferase activity [Evidence IEA]
CDP-diacylglycerol--serine O-phosphatidyltransferase
COORDINATES: protein motif:HMM:NF003678.0
phosphatidylserine decarboxylase family protein
COORDINATES: similar to AA sequence:RefSeq:WP_000861162.1
COORDINATES: similar to AA sequence:RefSeq:WP_014807959.1
GO:1990610 - acetolactate synthase regulator activity [Evidence IEA]
GO:0009082 - branched-chain amino acid biosynthetic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_014807960.1
GO:0005948 - acetolactate synthase complex [Evidence IEA]
GO:0003984 - acetolactate synthase activity [Evidence IEA]
biosynthetic-type acetolactate synthase large subunit
COORDINATES: similar to AA sequence:RefSeq:WP_014807961.1
COORDINATES: similar to AA sequence:RefSeq:WP_014812507.1
putative sulfate exporter family transporter
COORDINATES: similar to AA sequence:RefSeq:WP_014809819.1
COORDINATES: similar to AA sequence:RefSeq:WP_014809821.1
COORDINATES: similar to AA sequence:RefSeq:WP_011418531.1
GO:0008879 - glucose-1-phosphate thymidylyltransferase activity [Evidence IEA]
GO:0019305 - dTDP-rhamnose biosynthetic process [Evidence IEA]; GO:0009243 - O antigen biosynthetic process [Evidence IEA]
glucose-1-phosphate thymidylyltransferase RfbA
COORDINATES: similar to AA sequence:RefSeq:WP_011417211.1
GO:0008460 - dTDP-glucose 4,6-dehydratase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_002220108.1
GO:0008830 - dTDP-4-dehydrorhamnose 3,5-epimerase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF016228.2
GO:0008831 - dTDP-4-dehydrorhamnose reductase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF019846.2
COORDINATES: protein motif:HMM:TIGR01083.1
COORDINATES: protein motif:HMM:TIGR01695.1
GO:0034204 - lipid translocation [Evidence IEA]; GO:0009252 - peptidoglycan biosynthetic process [Evidence IEA]
murein biosynthesis integral membrane protein MurJ
COORDINATES: protein motif:HMM:TIGR00186.1
GO:0008173 - RNA methyltransferase activity [Evidence IEA]
GO:0009451 - RNA modification [Evidence IEA]
23S rRNA (guanosine(2251)-2'-O)-methyltransferase RlmB
COORDINATES: protein motif:HMM:NF024573.2
COORDINATES: protein motif:HMM:NF014373.2
COORDINATES: protein motif:HMM:NF016995.2
COORDINATES: protein motif:HMM:NF002270.0
COORDINATES: protein motif:HMM:TIGR03336.1
GO:0043805 - indolepyruvate ferredoxin oxidoreductase activity [Evidence IEA]
indolepyruvate ferredoxin oxidoreductase subunit alpha
COORDINATES: protein motif:HMM:NF013707.2
indolepyruvate oxidoreductase subunit beta
COORDINATES: protein motif:HMM:NF016281.2
COORDINATES: protein motif:HMM:TIGR00577.1
GO:0003684 - damaged DNA binding [Evidence IEA]; GO:0019104 - DNA N-glycosylase activity [Evidence IEA]; GO:0003906 - DNA-(apurinic or apyrimidinic site) endonuclease activity [Evidence IEA]; GO:0016799 - hydrolase activity, hydrolyzing N-glycosyl compounds [Evidence IEA]; GO:0003676 - nucleic acid binding [Evidence IEA]; GO:0008534 - oxidized purine nucleobase lesion DNA N-glycosylase activity [Evidence IEA]; GO:0008270 - zinc ion binding [Evidence IEA]
GO:0006284 - base-excision repair [Evidence IEA]; GO:0006281 - DNA repair [Evidence IEA]
bifunctional DNA-formamidopyrimidine glycosylase/DNA-(apurinic or apyrimidinic site) lyase
COORDINATES: similar to AA sequence:RefSeq:WP_014812736.1
phosphoribosylaminoimidazolecarboxamide formyltransferase
COORDINATES: similar to AA sequence:RefSeq:WP_014809121.1
GO:0003678 - DNA helicase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_014808931.1
COORDINATES: protein motif:HMM:NF012640.2
anthranilate synthase component I family protein
COORDINATES: similar to AA sequence:RefSeq:WP_013706780.1
COORDINATES: protein motif:HMM:NF014826.2
COORDINATES: protein motif:HMM:NF004064.0
GO:0004126 - cytidine deaminase activity [Evidence IEA]
GO:0008655 - pyrimidine-containing compound salvage [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR00693.1
GO:0004789 - thiamine-phosphate diphosphorylase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF006830.0
GO:0004417 - hydroxyethylthiazole kinase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF011291.0
GO:0005524 - ATP binding [Evidence IEA]; GO:0004819 - glutamine-tRNA ligase activity [Evidence IEA]; GO:0000166 - nucleotide binding [Evidence IEA]
GO:0006425 - glutaminyl-tRNA aminoacylation [Evidence IEA]
glutamine--tRNA ligase/YqeY domain fusion protein
COORDINATES: protein motif:HMM:NF006375.0
GO:0003677 - DNA binding [Evidence IEA]; GO:0003887 - DNA-directed DNA polymerase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_013706051.1
COORDINATES: protein motif:HMM:NF014470.2
GO:0015031 - protein transport [Evidence IEA]
twin-arginine translocase TatA/TatE family subunit
COORDINATES: similar to AA sequence:RefSeq:WP_011418154.1
COORDINATES: protein motif:HMM:NF023428.2
replication-associated recombination protein A
COORDINATES: similar to AA sequence:RefSeq:WP_014809626.1
COORDINATES: similar to AA sequence:RefSeq:WP_011418246.1
GO:0042286 - glutamate-1-semialdehyde 2,1-aminomutase activity [Evidence IEA]
glutamate-1-semialdehyde 2,1-aminomutase
COORDINATES: protein motif:HMM:NF037131.2
Lrp/AsnC family transcriptional regulator
COORDINATES: protein motif:HMM:NF012354.2
COORDINATES: similar to AA sequence:RefSeq:WP_014811134.1
secondary thiamine-phosphate synthase enzyme YjbQ
COORDINATES: similar to AA sequence:RefSeq:WP_011418109.1
bifunctional pyr operon transcriptional regulator/uracil phosphoribosyltransferase PyrR
COORDINATES: protein motif:HMM:TIGR00158.1
COORDINATES: protein motif:HMM:NF021506.2
COORDINATES: similar to AA sequence:RefSeq:WP_014809119.1
COORDINATES: protein motif:HMM:TIGR00166.1
COORDINATES: protein motif:HMM:NF024879.2
glycine zipper domain-containing protein
COORDINATES: protein motif:HMM:TIGR01951.1
transcription antitermination factor NusB
COORDINATES: similar to AA sequence:RefSeq:WP_014811643.1
GO:0009349 - riboflavin synthase complex [Evidence IEA]
GO:0000906 - 6,7-dimethyl-8-ribityllumazine synthase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011416096.1
GO:0008686 - 3,4-dihydroxy-2-butanone-4-phosphate synthase activity [Evidence IEA]; GO:0003935 - GTP cyclohydrolase II activity [Evidence IEA]
bifunctional 3,4-dihydroxy-2-butanone-4-phosphate synthase/GTP cyclohydrolase II
COORDINATES: protein motif:HMM:TIGR00187.1
COORDINATES: protein motif:HMM:NF014074.2
ATP-dependent Clp protease proteolytic subunit
COORDINATES: protein motif:HMM:NF007113.1
nucleoside triphosphate pyrophosphohydrolase
COORDINATES: protein motif:HMM:NF014704.2
COORDINATES: similar to AA sequence:RefSeq:WP_014811823.1
COORDINATES: protein motif:HMM:NF012524.2
COORDINATES: similar to AA sequence:RefSeq:WP_013707749.1
sigma-54 factor interaction domain-containing protein
COORDINATES: protein motif:HMM:NF018640.2
RNA repair transcriptional activator RtcR family protein
COORDINATES: protein motif:HMM:NF012452.2
COORDINATES: similar to AA sequence:RefSeq:WP_009088771.1
GO:0055052 - ATP-binding cassette (ABC) transporter complex, substrate-binding subunit-containing [Evidence IEA]; GO:0009898 - cytoplasmic side of plasma membrane [Evidence IEA]
GO:0005524 - ATP binding [Evidence IEA]; GO:0015415 - ATPase-coupled phosphate ion transmembrane transporter activity [Evidence IEA]
phosphate ABC transporter ATP-binding protein PstB
COORDINATES: similar to AA sequence:RefSeq:WP_011417392.1
COORDINATES: protein motif:HMM:TIGR00974.1
GO:0015415 - ATPase-coupled phosphate ion transmembrane transporter activity [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR02138.1
phosphate ABC transporter permease subunit PstC
COORDINATES: protein motif:HMM:TIGR02135.1
GO:0051049 - regulation of transport [Evidence IEA]
phosphate signaling complex protein PhoU
COORDINATES: similar to AA sequence:RefSeq:WP_014812778.1
COORDINATES: protein motif:HMM:NF028046.2
COORDINATES: protein motif:HMM:NF008171.0
GO:0043190 - ATP-binding cassette (ABC) transporter complex [Evidence IEA]
GO:0042301 - phosphate ion binding [Evidence IEA]
GO:0035435 - phosphate ion transmembrane transport [Evidence IEA]
phosphate ABC transporter substrate-binding protein PstS
COORDINATES: similar to AA sequence:RefSeq:WP_013707555.1
COORDINATES: similar to AA sequence:RefSeq:WP_014812780.1
COORDINATES: similar to AA sequence:RefSeq:WP_014812765.1
methylenetetrahydrofolate--tRNA-(uracil(54)- C(5))-methyltransferase (FADH(2)-oxidizing) TrmFO
COORDINATES: similar to AA sequence:RefSeq:WP_011417280.1
GO:0003677 - DNA binding [Evidence IEA]; GO:0003917 - DNA topoisomerase type I (single strand cut, ATP-independent) activity [Evidence IEA]
GO:0006260 - DNA replication [Evidence IEA]; GO:0006265 - DNA topological change [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR00732.1
GO:0009294 - DNA-mediated transformation [Evidence IEA]
COORDINATES: protein motif:HMM:NF012570.2
COORDINATES: similar to AA sequence:RefSeq:WP_014812592.1
COORDINATES: similar to AA sequence:RefSeq:WP_012270584.1
GO:0008479 - queuine tRNA-ribosyltransferase activity [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR00113.1
GO:0016853 - isomerase activity [Evidence IEA]; GO:0016740 - transferase activity [Evidence IEA]
tRNA preQ1(34) S-adenosylmethionine ribosyltransferase-isomerase QueA
COORDINATES: similar to AA sequence:RefSeq:WP_010929614.1
COORDINATES: protein motif:HMM:NF014411.2
COORDINATES: similar to AA sequence:RefSeq:WP_011416311.1
COORDINATES: protein motif:HMM:NF012792.2
COORDINATES: protein motif:HMM:NF012770.2
COORDINATES: similar to AA sequence:RefSeq:WP_011418269.1
COORDINATES: similar to AA sequence:RefSeq:WP_014812111.1
COORDINATES: similar to AA sequence:RefSeq:WP_011418311.1
2-oxoacid:ferredoxin oxidoreductase subunit beta
COORDINATES: similar to AA sequence:RefSeq:WP_011418312.1
GO:0016903 - oxidoreductase activity, acting on the aldehyde or oxo group of donors [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_014811875.1
GO:0004048 - anthranilate phosphoribosyltransferase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF001377.0
GO:0004425 - indole-3-glycerol-phosphate synthase activity [Evidence IEA]
GO:0006568 - tryptophan metabolic process [Evidence IEA]
indole-3-glycerol phosphate synthase TrpC
COORDINATES: similar to AA sequence:RefSeq:WP_013707602.1
COORDINATES: protein motif:HMM:NF002298.0
GO:0004640 - phosphoribosylanthranilate isomerase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011417721.1
GO:0004834 - tryptophan synthase activity [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR00262.1
COORDINATES: protein motif:HMM:NF013375.2
COORDINATES: similar to AA sequence:RefSeq:WP_011417713.1
GO:0004107 - chorismate synthase activity [Evidence IEA]
GO:0009073 - aromatic amino acid family biosynthetic process [Evidence IEA]
COORDINATES: protein motif:HMM:NF014234.2
GO:0008977 - prephenate dehydrogenase (NAD+) activity [Evidence IEA]; GO:0004665 - prephenate dehydrogenase (NADP+) activity [Evidence IEA]
GO:0006571 - tyrosine biosynthetic process [Evidence IEA]
prephenate dehydrogenase/arogenate dehydrogenase family protein
COORDINATES: similar to AA sequence:RefSeq:WP_000884181.1
GO:0004828 - serine-tRNA ligase activity [Evidence IEA]
GO:0006434 - seryl-tRNA aminoacylation [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_013707615.1
COORDINATES: similar to AA sequence:RefSeq:WP_013707614.1
COORDINATES: protein motif:HMM:NF013740.2
COORDINATES: protein motif:HMM:NF015961.2
COORDINATES: protein motif:HMM:NF020908.2
COORDINATES: similar to AA sequence:RefSeq:WP_011417175.1
COORDINATES: protein motif:HMM:NF006696.0
COORDINATES: protein motif:HMM:NF012335.2
COORDINATES: protein motif:HMM:TIGR01245.1
COORDINATES: similar to AA sequence:RefSeq:WP_013706253.1
COORDINATES: protein motif:HMM:NF014699.2
COORDINATES: protein motif:HMM:NF014728.2
COORDINATES: protein motif:HMM:NF025724.2
COORDINATES: protein motif:HMM:NF008967.0
GO:0003844 - 1,4-alpha-glucan branching enzyme activity [Evidence IEA]; GO:0043169 - cation binding [Evidence IEA]; GO:0004553 - hydrolase activity, hydrolyzing O-glycosyl compounds [Evidence IEA]
GO:0005975 - carbohydrate metabolic process [Evidence IEA]; GO:0005978 - glycogen biosynthetic process [Evidence IEA]
COORDINATES: protein motif:HMM:NF013427.2
GO:0008270 - zinc ion binding [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR02937.1
GO:0003677 - DNA binding [Evidence IEA]; GO:0003700 - DNA-binding transcription factor activity [Evidence IEA]; GO:0016987 - sigma factor activity [Evidence IEA]
GO:0006352 - DNA-templated transcription initiation [Evidence IEA]; GO:0006355 - regulation of DNA-templated transcription [Evidence IEA]
sigma-70 family RNA polymerase sigma factor
COORDINATES: protein motif:HMM:NF017989.2
LpxI, functionally equivalent to LpxH, replaces it in LPS biosynthesis in a minority of bacteria; Derived by automated computational analysis using gene prediction method: Protein Homology.
UDP-2,3-diacylglucosamine diphosphatase LpxI
COORDINATES: similar to AA sequence:RefSeq:WP_011418146.1
COORDINATES: protein motif:HMM:TIGR01750.1
COORDINATES: protein motif:HMM:NF002060.0
GO:0016410 - N-acyltransferase activity [Evidence IEA]
UDP-3-O-(3-hydroxymyristoyl)glucosamine N-acyltransferase
COORDINATES: protein motif:HMM:TIGR03303.1
outer membrane protein assembly factor BamA
COORDINATES: similar to AA sequence:RefSeq:WP_011418150.1
COORDINATES: similar to AA sequence:RefSeq:WP_011418151.1
GO:0042953 - lipoprotein transport [Evidence IEA]
lipoprotein-releasing ABC transporter permease subunit
COORDINATES: similar to AA sequence:RefSeq:WP_002436798.1
GO:0004824 - lysine-tRNA ligase activity [Evidence IEA]
GO:0006430 - lysyl-tRNA aminoacylation [Evidence IEA]
COORDINATES: protein motif:HMM:NF012436.2
COORDINATES: similar to AA sequence:RefSeq:WP_014810489.1
COORDINATES: similar to AA sequence:RefSeq:WP_014810490.1
COORDINATES: protein motif:HMM:NF038038.1
sulfate reduction electron transfer complex DsrMKJOP subunit DsrJ
COORDINATES: similar to AA sequence:RefSeq:WP_010938585.1
COORDINATES: similar to AA sequence:RefSeq:WP_014810493.1
sulfate reduction electron transfer complex DsrMKJOP subunit DsrM
COORDINATES: protein motif:HMM:NF025719.2
RsbRD N-terminal domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_014810267.1
COORDINATES: similar to AA sequence:RefSeq:WP_013707186.1
COORDINATES: protein motif:HMM:NF005840.0
COORDINATES: protein motif:HMM:NF006630.0
GO:0006886 - intracellular protein transport [Evidence IEA]; GO:0017038 - protein import [Evidence IEA]; GO:0006605 - protein targeting [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_000847902.1
GO:0046872 - metal ion binding [Evidence IEA]
SEC-C metal-binding domain-containing protein
COORDINATES: protein motif:HMM:NF003802.0
GO:0004358 - glutamate N-acetyltransferase activity [Evidence IEA]
bifunctional glutamate N-acetyltransferase/amino-acid acetyltransferase ArgJ
COORDINATES: protein motif:HMM:TIGR00056.1
COORDINATES: similar to AA sequence:RefSeq:WP_014809503.1
ABC-type transport auxiliary lipoprotein family protein
COORDINATES: similar to AA sequence:RefSeq:WP_016387099.1
GO:0004634 - phosphopyruvate hydratase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_014810001.1
COORDINATES: similar to AA sequence:RefSeq:WP_014810003.1
COORDINATES: protein motif:HMM:NF014677.2
COORDINATES: protein motif:HMM:TIGR00494.1
GO:1903425 - fluoride transmembrane transporter activity [Evidence IEA]
GO:1903424 - fluoride transmembrane transport [Evidence IEA]
COORDINATES: nucleotide motif:Rfam:14.4:RF01734
Fluoride riboswitches increase expression of downstream genes that help mitigate the toxic effects of very high levels of fluoride; They are found in a wide variety of bacteria and archaea; Derived by automated computational analysis using gene prediction method: cmsearch.
COORDINATES: protein motif:HMM:NF012239.2
COORDINATES: similar to AA sequence:RefSeq:WP_013707680.1
COORDINATES: similar to AA sequence:RefSeq:WP_013707679.1
COORDINATES: similar to AA sequence:RefSeq:WP_014810367.1
GO:0004813 - alanine-tRNA ligase activity [Evidence IEA]
GO:0006419 - alanyl-tRNA aminoacylation [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_017579564.1
GO:0008094 - ATP-dependent activity, acting on DNA [Evidence IEA]; GO:0003677 - DNA binding [Evidence IEA]
GO:0006310 - DNA recombination [Evidence IEA]; GO:0006281 - DNA repair [Evidence IEA]; GO:0009432 - SOS response [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR02258.1
GO:0008664 - 2'-5'-RNA ligase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF001813.0
COORDINATES: protein motif:HMM:NF016489.2
COORDINATES: protein motif:HMM:TIGR00546.1
GO:0042158 - lipoprotein biosynthetic process [Evidence IEA]; GO:0006497 - protein lipidation [Evidence IEA]
COORDINATES: protein motif:HMM:NF000908.1
GO:0005525 - GTP binding [Evidence IEA]; GO:0003723 - RNA binding [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_013707236.1
COORDINATES: protein motif:HMM:NF013237.2
COORDINATES: protein motif:HMM:NF024881.2
COORDINATES: protein motif:HMM:NF025793.2
COORDINATES: protein motif:HMM:TIGR02063.1
GO:0008997 - ribonuclease R activity [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR03986.1
TIGR03986 family CRISPR-associated RAMP protein
COORDINATES: protein motif:HMM:TIGR02619.1
COORDINATES: protein motif:HMM:NF015728.2
RAMP superfamily CRISPR-associated protein
COORDINATES: protein motif:HMM:TIGR02581.1
CRISPR-associated RAMP Csx10 family protein
COORDINATES: protein motif:HMM:NF013984.2
COORDINATES: protein motif:HMM:TIGR00644.1
GO:0008297 - single-stranded DNA exodeoxyribonuclease activity [Evidence IEA]
single-stranded-DNA-specific exonuclease RecJ
COORDINATES: protein motif:HMM:NF001911.0
COORDINATES: similar to AA sequence:RefSeq:WP_018054362.1
GO:0004424 - imidazoleglycerol-phosphate dehydratase activity [Evidence IEA]
imidazoleglycerol-phosphate dehydratase HisB
COORDINATES: similar to AA sequence:RefSeq:WP_011417860.1
COORDINATES: protein motif:HMM:NF006761.0
COORDINATES: protein motif:HMM:NF024970.2
COORDINATES: protein motif:HMM:NF019042.2
COORDINATES: protein motif:HMM:NF025716.2
COORDINATES: protein motif:HMM:NF024771.2
COORDINATES: protein motif:HMM:NF005414.0
GO:0016742 - hydroxymethyl-, formyl- and related transferase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF008872.0
bifunctional UDP-4-keto-pentose/UDP-xylose synthase
COORDINATES: similar to AA sequence:RefSeq:WP_011417864.1
GO:0050518 - 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase activity [Evidence IEA]
GO:0019288 - isopentenyl diphosphate biosynthetic process, methylerythritol 4-phosphate pathway [Evidence IEA]
2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase
COORDINATES: similar to AA sequence:RefSeq:WP_011417862.1
GO:0008685 - 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase activity [Evidence IEA]
2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase
COORDINATES: protein motif:HMM:NF015418.2
COORDINATES: nucleotide motif:Rfam:14.4:RF00177
COORDINATES: nucleotide motif:Rfam:14.4:RF02541
COORDINATES: nucleotide motif:Rfam:14.4:RF00001
COORDINATES: similar to AA sequence:RefSeq:WP_013707551.1
type II toxin-antitoxin system YafQ family toxin
COORDINATES: protein motif:HMM:NF024487.2
COORDINATES: protein motif:HMM:NF016635.2
translation initiation factor IF-2 N-terminal domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_013705115.1
23S ribosomal RNA rRNA prediction is too short
COORDINATES: protein motif:HMM:TIGR01512.1
COORDINATES: similar to AA sequence:RefSeq:WP_014808121.1
metal-sensitive transcriptional regulator
COORDINATES: similar to AA sequence:RefSeq:WP_014809409.1
enoyl-CoA hydratase/isomerase family protein
COORDINATES: similar to AA sequence:RefSeq:WP_014808934.1
COORDINATES: similar to AA sequence:RefSeq:WP_011418357.1
vitamin B12-dependent ribonucleotide reductase
COORDINATES: similar to AA sequence:RefSeq:WP_011418733.1
COORDINATES: similar to AA sequence:RefSeq:WP_014812930.1
COORDINATES: nucleotide motif:Rfam:14.4:RF00010
COORDINATES: protein motif:HMM:NF014630.2
C4-type zinc ribbon domain-containing protein
COORDINATES: protein motif:HMM:TIGR00486.1
GO:0051540 - metal cluster binding [Evidence IEA]
Nif3-like dinuclear metal center hexameric protein
COORDINATES: protein motif:HMM:NF004208.0
GO:0003700 - DNA-binding transcription factor activity [Evidence IEA]; GO:0016987 - sigma factor activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF012367.2
COORDINATES: protein motif:HMM:TIGR01391.1
GO:0003896 - DNA primase activity [Evidence IEA]
GO:0006269 - DNA replication, synthesis of RNA primer [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR01069.1
GO:0030983 - mismatched DNA binding [Evidence IEA]
GO:0006259 - DNA metabolic process [Evidence IEA]
COORDINATES: protein motif:HMM:NF020977.2
COORDINATES: similar to AA sequence:RefSeq:WP_014811680.1
COORDINATES: protein motif:HMM:NF037435.2
COORDINATES: protein motif:HMM:TIGR00121.1
GO:0004077 - biotin-[acetyl-CoA-carboxylase] ligase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011417169.1
COORDINATES: protein motif:HMM:NF014605.2
COORDINATES: protein motif:HMM:NF014392.2
COORDINATES: protein motif:HMM:NF016258.2
outer membrane protein assembly factor BamE
COORDINATES: protein motif:HMM:NF021073.2
COORDINATES: protein motif:HMM:NF015834.2
COORDINATES: similar to AA sequence:RefSeq:WP_011418251.1
COORDINATES: similar to AA sequence:RefSeq:WP_006007371.1
COORDINATES: protein motif:HMM:NF003993.0
redox-sensing transcriptional repressor Rex
COORDINATES: similar to AA sequence:RefSeq:WP_014810304.1
GO:0005524 - ATP binding [Evidence IEA]; GO:0016887 - ATP hydrolysis activity [Evidence IEA]; GO:0003677 - DNA binding [Evidence IEA]
COORDINATES: protein motif:HMM:NF012424.2
dihydrolipoamide acetyltransferase family protein
COORDINATES: similar to AA sequence:RefSeq:WP_011417093.1
COORDINATES: protein motif:HMM:TIGR00143.1
GO:0003998 - acylphosphatase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF013611.2
HypC/HybG/HupF family hydrogenase formation chaperone
COORDINATES: protein motif:HMM:NF014034.2
GO:0016530 - metallochaperone activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF012970.2
COORDINATES: similar to AA sequence:RefSeq:WP_001266954.1
COORDINATES: similar to AA sequence:RefSeq:WP_003210966.1
GO:0004750 - D-ribulose-phosphate 3-epimerase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF001453.0
COORDINATES: protein motif:HMM:NF014600.2
COORDINATES: similar to AA sequence:RefSeq:WP_014812905.1
glycogen/starch/alpha-glucan phosphorylase
COORDINATES: similar to AA sequence:RefSeq:WP_011416672.1
COORDINATES: similar to AA sequence:RefSeq:WP_011417397.1
GO:0004822 - isoleucine-tRNA ligase activity [Evidence IEA]
GO:0006428 - isoleucyl-tRNA aminoacylation [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR00077.1
GO:0004190 - aspartic-type endopeptidase activity [Evidence IEA]
GO:0009306 - protein secretion [Evidence IEA]; GO:0006508 - proteolysis [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR00544.1
GO:0008961 - phosphatidylglycerol-prolipoprotein diacylglyceryl transferase activity [Evidence IEA]
GO:0009249 - protein lipoylation [Evidence IEA]
prolipoprotein diacylglyceryl transferase
COORDINATES: protein motif:HMM:NF013327.2
COORDINATES: similar to AA sequence:RefSeq:WP_011417492.1
GO:0030604 - 1-deoxy-D-xylulose-5-phosphate reductoisomerase activity [Evidence IEA]; GO:0046872 - metal ion binding [Evidence IEA]; GO:0070402 - NADPH binding [Evidence IEA]; GO:0005515 - protein binding [Evidence IEA]
GO:0008299 - isoprenoid biosynthetic process [Evidence IEA]
1-deoxy-D-xylulose-5-phosphate reductoisomerase
COORDINATES: similar to AA sequence:RefSeq:WP_011418679.1
COORDINATES: similar to AA sequence:RefSeq:WP_002879270.1
COORDINATES: protein motif:HMM:NF039822.1
COORDINATES: protein motif:HMM:NF012593.2
cation:dicarboxylase symporter family transporter
GO:0015293 - symporter activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF012707.2
transporter substrate-binding domain-containing protein
COORDINATES: protein motif:HMM:NF014017.2
COORDINATES: similar to AA sequence:RefSeq:WP_010870790.1
3-isopropylmalate dehydratase small subunit
COORDINATES: similar to AA sequence:RefSeq:WP_014811910.1
GO:0003862 - 3-isopropylmalate dehydrogenase activity [Evidence IEA]; GO:0000287 - magnesium ion binding [Evidence IEA]; GO:0051287 - NAD binding [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_018003337.1
GO:0004073 - aspartate-semialdehyde dehydrogenase activity [Evidence IEA]; GO:0051287 - NAD binding [Evidence IEA]; GO:0016620 - oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor [Evidence IEA]
GO:0008652 - cellular amino acid biosynthetic process [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR00095.1
GO:0052913 - 16S rRNA (guanine(966)-N(2))-methyltransferase activity [Evidence IEA]
16S rRNA (guanine(966)-N(2))-methyltransferase RsmD
COORDINATES: similar to AA sequence:RefSeq:WP_011417499.1
GO:0004595 - pantetheine-phosphate adenylyltransferase activity [Evidence IEA]
pantetheine-phosphate adenylyltransferase
COORDINATES: protein motif:HMM:NF012492.2
GO:0005524 - ATP binding [Evidence IEA]; GO:0003676 - nucleic acid binding [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR00194.1
GO:0009381 - excinuclease ABC activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011417490.1
COORDINATES: similar to AA sequence:RefSeq:WP_011417489.1
GO:0008135 - translation factor activity, RNA binding [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_005328724.1
GO:0033862 - UMP kinase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_014811741.1
COORDINATES: similar to AA sequence:RefSeq:WP_011417486.1
COORDINATES: protein motif:HMM:NF020950.2
COORDINATES: protein motif:HMM:NF033484.1
GO:0004722 - protein serine/threonine phosphatase activity [Evidence IEA]
GO:0006470 - protein dephosphorylation [Evidence IEA]
Stp1/IreP family PP2C-type Ser/Thr phosphatase
COORDINATES: protein motif:HMM:NF012708.2
COORDINATES: protein motif:HMM:TIGR03436.1
COORDINATES: protein motif:HMM:NF020084.2
FIST C-terminal domain-containing protein
COORDINATES: protein motif:HMM:NF024867.2
COORDINATES: similar to AA sequence:RefSeq:WP_013706021.1
COORDINATES: similar to AA sequence:RefSeq:WP_018002124.1
COORDINATES: protein motif:HMM:NF016875.2
COORDINATES: protein motif:HMM:TIGR02607.1
COORDINATES: similar to AA sequence:RefSeq:WP_013707400.1
COORDINATES: protein motif:HMM:NF017569.2
COORDINATES: similar to AA sequence:RefSeq:WP_013707433.1
COORDINATES: similar to AA sequence:RefSeq:WP_016291128.1
COORDINATES: protein motif:HMM:NF024812.2