Camarhynchus parvulus chromosome 4A, STF_HiC, whole genome shotgun sequence.
type: Entry
definition: Camarhynchus parvulus chromosome 4A, STF_HiC, whole genome shotgun sequence.
sequence version: NC_044600.1
sequence date: 2019-09-26
sequence: sequence
division: CON
label: NC_044600.1
type: RefSeq
SIO_000068: refseq
dblink: PRJNA566393
dblink: SAMEA5603054
keyword: WGS
keyword: RefSeq
source: Camarhynchus parvulus
organism: Camarhynchus parvulus
taxonomy: Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Passeriformes; Thraupidae; Camarhynchus.
comment: REFSEQ INFORMATION: The reference sequence is identical to\nLR595709.1.\nAssembly name: STF_HiC\nThe genomic sequence for this RefSeq record is from the\nwhole-genome assembly released by the UPPSALA UNIVERISTY on\n2019/09/06. The original whole-genome shotgun project has the\naccession CABFNF000000000.1.\n\n##Genome-Annotation-Data-START##\nAnnotation Provider :: NCBI\nAnnotation Status :: Full annotation\nAnnotation Name :: Camarhynchus parvulus Annotation\n Release 100\nAnnotation Version :: 100\nAnnotation Pipeline :: NCBI eukaryotic genome annotation\n pipeline\nAnnotation Software Version :: 8.2\nAnnotation Method :: Best-placed RefSeq; Gnomon\nFeatures Annotated :: Gene; mRNA; CDS; ncRNA\n##Genome-Annotation-Data-END##

sequence
subclass of: SO_0000340
sequence length: 19696636
topology: linear
so has quality: SO_0000987
location: 1..19696636
location: region:1-19696636:1
RO_0002162: 87175

NC_044600
type: RefSeq
SIO_000068: refseq

PRJNA566393
type: BioProject
SIO_000068: bioproject

SAMEA5603054
type: BioSample
SIO_000068: biosample

position:1:1
position: 1
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:19696636:1
position: 19696636
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

feature:1-19696636:1:source
so part of: sequence
organism: Camarhynchus parvulus
mol type: genomic DNA
chromosome: 4A

87175
type: Taxonomy
SIO_000068: taxonomy

LOC115915016
type: Gene
subclass of: SO_0000704
RO_0002162: 87175
gene: LOC115915016
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1916..8501
location: region:1916-8501:1
so has part: feature:1916-8501:1:exon
subclass of: SO_0000010

115915016
type: Gene
SIO_000068: ncbigene

position:1916:1
position: 1916
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:8501:1
position: 8501
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1916-8501:1:exon

LOC115915016
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 87175
gene: LOC115915016
product: adhesion G-protein coupled receptor G2-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 ESTs
transcript id: XM_030967938.1
SIO_010081: LOC115915016
subclass of: SO_0000673
so part of: LOC115915016
location: join(1916..1949,2786..2889,4213..4334,4968..5236,6417..6510,7571..7860,8444..8501)
location: region:1916-8501:1
so has part: feature:1916-1949:1:exon
so has part: feature:2786-2889:1:exon
so has part: feature:4213-4334:1:exon
so has part: feature:4968-5236:1:exon
so has part: feature:6417-6510:1:exon
so has part: feature:7571-7860:1:exon
so has part: feature:8444-8501:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1916-1949:1:exon

position:1949:1
position: 1949
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2786-2889:1:exon

position:2786:1
position: 2786
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2889:1
position: 2889
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:4213-4334:1:exon

position:4213:1
position: 4213
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4334:1
position: 4334
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:4968-5236:1:exon

position:4968:1
position: 4968
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5236:1
position: 5236
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:6417-6510:1:exon

position:6417:1
position: 6417
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6510:1
position: 6510
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:7571-7860:1:exon

position:7571:1
position: 7571
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7860:1
position: 7860
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:8444-8501:1:exon

position:8444:1
position: 8444
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC115915016
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 87175
gene: LOC115915016
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: adhesion G-protein coupled receptor G2-like
translation: MEYTDMNYTICFCNHLTHFGVLLDLARTEIDVTHDHVLTLISYAGCGASSLFLGITLMTYLTLEKVRRDNPSKILLNLCAALLMLNMVFLINSWLTSFNQPGLCITVAMLLHYFLLAAFTWMCLESVHFYLALVKVFNVYVPKYILKCCIAGWGIPAIVITLVLIINKDFYGNGSLSKSHPYSNFCWIQDNTVFYISVVAYFFLIFLMNTAMFITVLLQIHSVKTRTQKTSRF
SIO_010081: LOC115915016
subclass of: SO_0000673
so part of: LOC115915016
location: join(2821..2889,4213..4334,4968..5236,6417..6510,7571..7718)
location: region:2821-7718:1
so has part: feature:2821-2889:1:exon
so has part: feature:4213-4334:1:exon
so has part: feature:4968-5236:1:exon
so has part: feature:6417-6510:1:exon
so has part: feature:7571-7718:1:exon

XP_030823798.1
type: Protein
SIO_000068: ncbiprotein

position:2821:1
position: 2821
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7718:1
position: 7718
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2821-2889:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4213-4334:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4968-5236:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:6417-6510:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:7571-7718:1:exon

BRS3
type: Gene
subclass of: SO_0000704
RO_0002162: 87175
gene: BRS3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 20552..25590
location: region:20552-25590:1
so has part: feature:20552-25590:1:exon
subclass of: SO_0000010

115914917
type: Gene
SIO_000068: ncbigene

position:20552:1
position: 20552
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:25590:1
position: 25590
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:20552-25590:1:exon

BRS3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 87175
gene: BRS3
product: bombesin receptor subtype 3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 mRNAs, 1 EST, 13 Proteins
transcript id: XM_030967772.1
SIO_010081: BRS3
subclass of: SO_0000673
so part of: BRS3
location: join(20552..20967,23622..23973,24555..25590)
location: region:20552-25590:1
so has part: feature:20552-20967:1:exon
so has part: feature:23622-23973:1:exon
so has part: feature:24555-25590:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:20552-20967:1:exon

position:20967:1
position: 20967
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:23622-23973:1:exon

position:23622:1
position: 23622
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:23973:1
position: 23973
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:24555-25590:1:exon

position:24555:1
position: 24555
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

BRS3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 87175
gene: BRS3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: bombesin receptor subtype-3
translation: MSQLHLQSANQTLCASVESSSDNESTNEKWTEDSFPGLEILCTIYVTYAVIISVGLLGNAILIKVFFKIKSMQTVPNIFITSLAFGDLLLLLTCVPIDATRYIVDTWLFGRIGCKLLSFIQLTSVGVSVFTLTVLSADRYRAIVKPLELQTSDALLKTCCKAGCVWIVSMIFAIPEAVFSDLYSFSNPEKNVTFEACAPYPVSEKILQEAHSLVCFLVFYIVPLAVISVYYFLIARTLYKSTSNMPAEEHTHARKQIESRKRVAKTVLVLVALFAFCWLPNHILYLYRSFTYHTSVNASTFHLIATIFSRALAFSNSCVNPFALYWLSKSFRQHFKRQVSCCKAAFCAKPPSAPQSSSPTRALSVTGSMRGSEISVTLLTDYSITKEEESV
SIO_010081: BRS3
subclass of: SO_0000673
so part of: BRS3
location: join(20552..20967,23622..23973,24555..24962)
location: region:20552-24962:1
so has part: feature:20552-20967:1:exon
so has part: feature:23622-23973:1:exon
so has part: feature:24555-24962:1:exon

XP_030823632.1
type: Protein
SIO_000068: ncbiprotein

position:24962:1
position: 24962
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:20552-20967:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:23622-23973:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:24555-24962:1:exon

HTATSF1
type: Gene
subclass of: SO_0000704
RO_0002162: 87175
gene: HTATSF1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 30676..45489
location: region:30676-45489:1
so has part: feature:30676-45489:1:exon
subclass of: SO_0000010

115914879
type: Gene
SIO_000068: ncbigene

position:30676:1
position: 30676
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:45489:1
position: 45489
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:30676-45489:1:exon

HTATSF1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 87175
gene: HTATSF1
product: HIV-1 Tat specific factor 1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 mRNAs, 14 ESTs, 8 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XM_030967711.1
SIO_010081: HTATSF1
subclass of: SO_0000673
so part of: HTATSF1
location: join(30676..31001,34562..34766,35074..35121,36272..36426,37454..37617,39193..39292,39828..39917,40400..40537,40903..45489)
location: region:30676-45489:1
so has part: feature:30676-31001:1:exon
so has part: feature:34562-34766:1:exon
so has part: feature:35074-35121:1:exon
so has part: feature:36272-36426:1:exon
so has part: feature:37454-37617:1:exon
so has part: feature:39193-39292:1:exon
so has part: feature:39828-39917:1:exon
so has part: feature:40400-40537:1:exon
so has part: feature:40903-45489:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:30676-31001:1:exon

position:31001:1
position: 31001
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:34562-34766:1:exon

position:34562:1
position: 34562
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:34766:1
position: 34766
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:35074-35121:1:exon

position:35074:1
position: 35074
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:35121:1
position: 35121
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:36272-36426:1:exon

position:36272:1
position: 36272
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:36426:1
position: 36426
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:37454-37617:1:exon

position:37454:1
position: 37454
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:37617:1
position: 37617
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:39193-39292:1:exon

position:39193:1
position: 39193
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:39292:1
position: 39292
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:39828-39917:1:exon

position:39828:1
position: 39828
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:39917:1
position: 39917
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:40400-40537:1:exon

position:40400:1
position: 40400
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:40537:1
position: 40537
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:40903-45489:1:exon

position:40903:1
position: 40903
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

HTATSF1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 87175
gene: HTATSF1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: HIV Tat-specific factor 1
translation: MSGEDGNEEFYRQLELQQQYEAKPAEGEGEGESDPFTYVDPADGAAYEWDLEKKAWFPKITEDFLATYHANYGFHADETDTSSASGTATESKQPVSSKKSGTQPSANETGRKQTDPKQKLEKRKLEPGWFHVEEDRNTNVYVTGLPPDITKDEFVQVMSKCGIIMRDPQTEEHKIKLYKDKEGNLKGDGLCCYLKRESVQLALRLLDEAEIRGYKLHVEVAKFQLKGEYDASKKKKKCKDYKKKLSQQQKQLDWRPEKKDGATRMRHERIVIIRNMFHPKDFEEDPLVLNEIREDLRTECEKFGQVKKVLIFDRHPDGVASVSFKEATEADLCKLTLNGRWFGGRQLSAETWDGVTDYQVEETAREREERLKVWESFLGDPDAKEQQTTSDLHSASSSVKLPEGKQPPEANDAPKEDANDDTHKRENNGGDINEDGAPSTDSSLAGSDGEADT
SIO_010081: HTATSF1
subclass of: SO_0000673
so part of: HTATSF1
location: join(30825..31001,34562..34766,35074..35121,36272..36426,37454..37617,39193..39292,39828..39917,40400..40537,40903..41187)
location: region:30825-41187:1
so has part: feature:30825-31001:1:exon
so has part: feature:34562-34766:1:exon
so has part: feature:35074-35121:1:exon
so has part: feature:36272-36426:1:exon
so has part: feature:37454-37617:1:exon
so has part: feature:39193-39292:1:exon
so has part: feature:39828-39917:1:exon
so has part: feature:40400-40537:1:exon
so has part: feature:40903-41187:1:exon

XP_030823571.1
type: Protein
SIO_000068: ncbiprotein

position:30825:1
position: 30825
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:41187:1
position: 41187
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:30825-31001:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:34562-34766:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:35074-35121:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:36272-36426:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:37454-37617:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:39193-39292:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:39828-39917:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:40400-40537:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:40903-41187:1:exon

VGLL1
type: Gene
subclass of: SO_0000704
RO_0002162: 87175
gene: VGLL1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 47046..55392
location: region:47046-55392:1
so has part: feature:47046-55392:1:exon
subclass of: SO_0000010

115914875
type: Gene
SIO_000068: ncbigene

position:47046:1
position: 47046
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:55392:1
position: 55392
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:47046-55392:1:exon

VGLL1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 87175
gene: VGLL1
product: vestigial like family member 1, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_030967704.1
SIO_010081: VGLL1
subclass of: SO_0000673
so part of: VGLL1
location: join(47046..47074,49594..49657,50330..50535,51151..51570,53677..53736,54362..55392)
location: region:47046-55392:1
so has part: feature:47046-47074:1:exon
so has part: feature:49594-49657:1:exon
so has part: feature:50330-50535:1:exon
so has part: feature:51151-51570:1:exon
so has part: feature:53677-53736:1:exon
so has part: feature:54362-55392:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:47046-47074:1:exon

position:47074:1
position: 47074
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:49594-49657:1:exon

position:49594:1
position: 49594
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:49657:1
position: 49657
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:50330-50535:1:exon

position:50330:1
position: 50330
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:50535:1
position: 50535
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:51151-51570:1:exon

position:51151:1
position: 51151
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:51570:1
position: 51570
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:53677-53736:1:exon

position:53677:1
position: 53677
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:53736:1
position: 53736
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:54362-55392:1:exon

position:54362:1
position: 54362
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

VGLL1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 87175
gene: VGLL1
product: vestigial like family member 1, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_030967706.1
SIO_010081: VGLL1
subclass of: SO_0000673
so part of: VGLL1
location: join(47046..47074,49594..49657,50330..50535,51151..51570,54362..55392)
location: region:47046-55392:1
so has part: feature:47046-47074:1:exon
so has part: feature:49594-49657:1:exon
so has part: feature:50330-50535:1:exon
so has part: feature:51151-51570:1:exon
so has part: feature:54362-55392:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:47046-47074:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:49594-49657:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:50330-50535:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:51151-51570:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:54362-55392:1:exon

VGLL1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 87175
gene: VGLL1
product: vestigial like family member 1, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_030967705.1
SIO_010081: VGLL1
subclass of: SO_0000673
so part of: VGLL1
location: join(47046..47074,49594..49657,50330..50535,51154..51570,53677..53736,54362..55392)
location: region:47046-55392:1
so has part: feature:47046-47074:1:exon
so has part: feature:49594-49657:1:exon
so has part: feature:50330-50535:1:exon
so has part: feature:51154-51570:1:exon
so has part: feature:53677-53736:1:exon
so has part: feature:54362-55392:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:47046-47074:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:49594-49657:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:50330-50535:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:51154-51570:1:exon

position:51154:1
position: 51154
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:53677-53736:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:54362-55392:1:exon

VGLL1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 87175
gene: VGLL1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: transcription cofactor vestigial-like protein 1 isoform X1
translation: MEETRKLSPKLSKSKEPVKTEWGSQSVVFTYFQGDINRMVDEHFSRALSNVKNPQDLSTTHRVDSMSPHQWDFSSHCYKPYPSSSSTSIATSALNFSAAGVVGPCQPSPLRSRPAQPADLWPFPPAGTPSVTGSVYPHTLPDLHAADELISDRKYSSLLGLLQQERCLTSMQECTMKQHSSSACMTGPARLQNMSQSSAPGGERKGSFYQGSENPSVSHATAGIQIHERRRDFYF
SIO_010081: VGLL1
subclass of: SO_0000673
so part of: VGLL1
location: join(50349..50535,51151..51570,53677..53736,54362..54402)
location: region:50349-54402:1
so has part: feature:50349-50535:1:exon
so has part: feature:51151-51570:1:exon
so has part: feature:53677-53736:1:exon
so has part: feature:54362-54402:1:exon

XP_030823564.1
type: Protein
SIO_000068: ncbiprotein

position:50349:1
position: 50349
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:54402:1
position: 54402
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:50349-50535:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:51151-51570:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:53677-53736:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:54362-54402:1:exon

VGLL1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 87175
gene: VGLL1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: transcription cofactor vestigial-like protein 1 isoform X3
translation: MEETRKLSPKLSKSKEPVKTEWGSQSVVFTYFQGDINRMVDEHFSRALSNVKNPQDLSTTHRVDSMSPHQWDFSSHCYKPYPSSSSTSIATSALNFSAAGVVGPCQPSPLRSRPAQPADLWPFPPAGTPSVTGSVYPHTLPDLHAADELISDRKYSSLLGLLQQERCLTSMQECTMKQHSSSACMTGPARLQNMSQSSAPGGGIQIHERRRDFYF
SIO_010081: VGLL1
subclass of: SO_0000673
so part of: VGLL1
location: join(50349..50535,51151..51570,54362..54402)
location: region:50349-54402:1
so has part: feature:50349-50535:1:exon
so has part: feature:51151-51570:1:exon
so has part: feature:54362-54402:1:exon

XP_030823566.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:50349-50535:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:51151-51570:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:54362-54402:1:exon

VGLL1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 87175
gene: VGLL1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: transcription cofactor vestigial-like protein 1 isoform X2
translation: MEETRKLSPKLSKSKEPVKTEWGSQSVVFTYFQGDINRMVDEHFSRALSNVKNPQDLSTTHRDSMSPHQWDFSSHCYKPYPSSSSTSIATSALNFSAAGVVGPCQPSPLRSRPAQPADLWPFPPAGTPSVTGSVYPHTLPDLHAADELISDRKYSSLLGLLQQERCLTSMQECTMKQHSSSACMTGPARLQNMSQSSAPGGERKGSFYQGSENPSVSHATAGIQIHERRRDFYF
SIO_010081: VGLL1
subclass of: SO_0000673
so part of: VGLL1
location: join(50349..50535,51154..51570,53677..53736,54362..54402)
location: region:50349-54402:1
so has part: feature:50349-50535:1:exon
so has part: feature:51154-51570:1:exon
so has part: feature:53677-53736:1:exon
so has part: feature:54362-54402:1:exon

XP_030823565.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:50349-50535:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:51154-51570:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:53677-53736:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:54362-54402:1:exon

CD40LG
type: Gene
subclass of: SO_0000704
RO_0002162: 87175
gene: CD40LG
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 74380..81382
location: region:74380-81382:1
so has part: feature:74380-81382:1:exon
subclass of: SO_0000010

115914904
type: Gene
SIO_000068: ncbigene

position:74380:1
position: 74380
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:81382:1
position: 81382
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:74380-81382:1:exon

CD40LG
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 87175
gene: CD40LG
product: CD40 ligand
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 mRNAs, 10 Proteins, and 41% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_030967750.1
SIO_010081: CD40LG
subclass of: SO_0000673
so part of: CD40LG
location: join(74380..74589,77014..77151,78336..78378,78679..78735,79013..79075,80984..81382)
location: region:74380-81382:1
so has part: feature:74380-74589:1:exon
so has part: feature:77014-77151:1:exon
so has part: feature:78336-78378:1:exon
so has part: feature:78679-78735:1:exon
so has part: feature:79013-79075:1:exon
so has part: feature:80984-81382:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:74380-74589:1:exon

position:74589:1
position: 74589
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:77014-77151:1:exon

position:77014:1
position: 77014
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:77151:1
position: 77151
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:78336-78378:1:exon

position:78336:1
position: 78336
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:78378:1
position: 78378
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:78679-78735:1:exon

position:78679:1
position: 78679
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:78735:1
position: 78735
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:79013-79075:1:exon

position:79013:1
position: 79013
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:79075:1
position: 79075
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:80984-81382:1:exon

position:80984:1
position: 80984
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

CD40LG
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 87175
gene: CD40LG
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: CD40 ligand
translation: MNEPYGPEAPRPISSTSPGIMKMFMGFLSVFIVVQTIGTVLFCLYLHMKMDKTEEMLSLNEDYIFLKKVQKCQTAEGQKSTLLDCEKVIKGFQNIQCKDGPPKEQPKFEMQRGPEHYEHPHVMHKNETSAAAEKREPIAVHLAGQQSNKAGSVLEWRETMYGPTNSLISNKEGKLKVKEAGLYYIYSQVSFCTPEVSLAPFTLYIYLHIPKEEDRLLLKGQRTQTSLKTHEEKHLKTVCALQSIRVGGVFNLREDDMVFVNVTDSTKVRYSHGNTYFGIFKL
SIO_010081: CD40LG
subclass of: SO_0000673
so part of: CD40LG
location: join(74434..74589,77014..77151,78336..78378,78679..78735,79013..79075,80984..81375)
location: region:74434-81375:1
so has part: feature:74434-74589:1:exon
so has part: feature:77014-77151:1:exon
so has part: feature:78336-78378:1:exon
so has part: feature:78679-78735:1:exon
so has part: feature:79013-79075:1:exon
so has part: feature:80984-81375:1:exon

XP_030823610.1
type: Protein
SIO_000068: ncbiprotein

position:74434:1
position: 74434
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:81375:1
position: 81375
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:74434-74589:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:77014-77151:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:78336-78378:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:78679-78735:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:79013-79075:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:80984-81375:1:exon

ARHGEF6
type: Gene
subclass of: SO_0000704
RO_0002162: 87175
gene: ARHGEF6
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(85450..127298)
location: region:85450-127298:-1
so has part: feature:85450-127298:-1:exon
subclass of: SO_0000010

115915040
type: Gene
SIO_000068: ncbigene

position:85450:-1
position: 85450
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:127298:-1
position: 127298
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:85450-127298:-1:exon

ARHGEF6
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 87175
gene: ARHGEF6
product: Rac/Cdc42 guanine nucleotide exchange factor 6, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 15 ESTs, 8 Proteins, and 98% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_030967996.1
SIO_010081: ARHGEF6
subclass of: SO_0000673
so part of: ARHGEF6
location: complement(join(85450..87795,88716..88770,89593..89692,90401..90490,91606..91699,92489..92509,95202..95327,95607..95740,96618..96696,97668..97754,98616..98762,100887..100946,102826..102964,104262..104384,105223..105318,105984..106078,107258..107328,109870..110071,110482..110609,115374..115458,123171..123254,124264..127298))
location: region:85450-127298:-1
so has part: feature:124264-127298:-1:exon
so has part: feature:123171-123254:-1:exon
so has part: feature:115374-115458:-1:exon
so has part: feature:110482-110609:-1:exon
so has part: feature:109870-110071:-1:exon
so has part: feature:107258-107328:-1:exon
so has part: feature:105984-106078:-1:exon
so has part: feature:105223-105318:-1:exon
so has part: feature:104262-104384:-1:exon
so has part: feature:102826-102964:-1:exon
so has part: feature:100887-100946:-1:exon
so has part: feature:98616-98762:-1:exon
so has part: feature:97668-97754:-1:exon
so has part: feature:96618-96696:-1:exon
so has part: feature:95607-95740:-1:exon
so has part: feature:95202-95327:-1:exon
so has part: feature:92489-92509:-1:exon
so has part: feature:91606-91699:-1:exon
so has part: feature:90401-90490:-1:exon
so has part: feature:89593-89692:-1:exon
so has part: feature:88716-88770:-1:exon
so has part: feature:85450-87795:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:124264-127298:-1:exon

position:124264:-1
position: 124264
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:123171-123254:-1:exon

position:123171:-1
position: 123171
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:123254:-1
position: 123254
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:115374-115458:-1:exon

position:115374:-1
position: 115374
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:115458:-1
position: 115458
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:110482-110609:-1:exon

position:110482:-1
position: 110482
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:110609:-1
position: 110609
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:109870-110071:-1:exon

position:109870:-1
position: 109870
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:110071:-1
position: 110071
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:107258-107328:-1:exon

position:107258:-1
position: 107258
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:107328:-1
position: 107328
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:105984-106078:-1:exon

position:105984:-1
position: 105984
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:106078:-1
position: 106078
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:105223-105318:-1:exon

position:105223:-1
position: 105223
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:105318:-1
position: 105318
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:104262-104384:-1:exon

position:104262:-1
position: 104262
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:104384:-1
position: 104384
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:102826-102964:-1:exon

position:102826:-1
position: 102826
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:102964:-1
position: 102964
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:100887-100946:-1:exon

position:100887:-1
position: 100887
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:100946:-1
position: 100946
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:98616-98762:-1:exon

position:98616:-1
position: 98616
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:98762:-1
position: 98762
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:97668-97754:-1:exon

position:97668:-1
position: 97668
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:97754:-1
position: 97754
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:96618-96696:-1:exon

position:96618:-1
position: 96618
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:96696:-1
position: 96696
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:95607-95740:-1:exon

position:95607:-1
position: 95607
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:95740:-1
position: 95740
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:95202-95327:-1:exon

position:95202:-1
position: 95202
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:95327:-1
position: 95327
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:92489-92509:-1:exon

position:92489:-1
position: 92489
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:92509:-1
position: 92509
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:91606-91699:-1:exon

position:91606:-1
position: 91606
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:91699:-1
position: 91699
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:90401-90490:-1:exon

position:90401:-1
position: 90401
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:90490:-1
position: 90490
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:89593-89692:-1:exon

position:89593:-1
position: 89593
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:89692:-1
position: 89692
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:88716-88770:-1:exon

position:88716:-1
position: 88716
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:88770:-1
position: 88770
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 22
SIO_000628: feature:85450-87795:-1:exon

position:87795:-1
position: 87795
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

ARHGEF6
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 87175
gene: ARHGEF6
product: Rac/Cdc42 guanine nucleotide exchange factor 6, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 13 ESTs, 10 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
transcript id: XM_030967994.1
SIO_010081: ARHGEF6
subclass of: SO_0000673
so part of: ARHGEF6
location: complement(join(85450..87795,88716..88770,89593..89692,90401..90490,91606..91699,95202..95327,95607..95740,96618..96696,97668..97754,98616..98762,100887..100946,102826..102964,104262..104384,105223..105318,105984..106078,107258..107328,109870..110071,110482..110609,115374..115452))
location: region:85450-115452:-1
so has part: feature:115374-115452:-1:exon
so has part: feature:110482-110609:-1:exon
so has part: feature:109870-110071:-1:exon
so has part: feature:107258-107328:-1:exon
so has part: feature:105984-106078:-1:exon
so has part: feature:105223-105318:-1:exon
so has part: feature:104262-104384:-1:exon
so has part: feature:102826-102964:-1:exon
so has part: feature:100887-100946:-1:exon
so has part: feature:98616-98762:-1:exon
so has part: feature:97668-97754:-1:exon
so has part: feature:96618-96696:-1:exon
so has part: feature:95607-95740:-1:exon
so has part: feature:95202-95327:-1:exon
so has part: feature:91606-91699:-1:exon
so has part: feature:90401-90490:-1:exon
so has part: feature:89593-89692:-1:exon
so has part: feature:88716-88770:-1:exon
so has part: feature:85450-87795:-1:exon

position:115452:-1
position: 115452
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:115374-115452:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:110482-110609:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:109870-110071:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:107258-107328:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:105984-106078:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:105223-105318:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:104262-104384:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:102826-102964:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:100887-100946:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:98616-98762:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:97668-97754:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:96618-96696:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:95607-95740:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:95202-95327:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:91606-91699:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:90401-90490:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:89593-89692:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:88716-88770:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:85450-87795:-1:exon

ARHGEF6
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 87175
gene: ARHGEF6
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: rho guanine nucleotide exchange factor 6 isoform X3
translation: MNPEEQIVTWLISLGVLNSPKKIVDDPEGFLKTSLKDGTVLCKLINRLLPGSAEKYCLEPKNEADCISNIQEFLKGCALLKVEVFDPHDLYTGDQFSKVLSALTAVNKATEDQLSKGPCSHLSSLNSTAGDPQSDSNSTASQSARVLRRQSKPVEMTENGSHQLVVKARFNFKQTNEDELSVNKGDIIYVTRVEEGGWWEGTLNGKTGWFPSNYVREIKSADKPLSPKALKGLENTQMTKNYYPVVLQNILETERDYAKELQSLLGTYLRPLQSCDKLSTGDITALLGNMEEISAFQQTLNQALEEVAKLPENQQRVGGCFMNLMPQFRSLYLTYCANHPSAVNVLTQHSDELEKFMESQGAASPGILILTTSLSKPFLRLDKYVTLLQELERHMEEAHADHEDVLKAITSFKSLVSQCQELRKRKQLELQILSESIQRWEGEDIKMMGNVIYMSQVMVQSGGSEEKEERYFLLFSNVLLMLSASPRMSGFIYQGKLPLTGMILTKLEDAEGNEHMFEITGNMMERITVSCSTSQDLHEWVDHLQRLTKGTCSTVSKTQSWSPHSTFSSAGQIRGPLEPPKILKPWSLSCLRPAPPLRPSAALSYKERMSYILKDSSKSPKTMKKFLPKRKTERKPSDEEFVIRKSTAALEEDAQILKVIEAYCTGAGFQQALSSGSRKDSIPQVLLPEEEKIIIEETRSNGQTVTEEKSLVDTVYALKDEVKELKQENKRMKQCLEEELKSRKDLEKLVRRLLKQTDECGREDTGRKSSLIA
SIO_010081: ARHGEF6
subclass of: SO_0000673
so part of: ARHGEF6
location: complement(join(87655..87795,88716..88770,89593..89692,90401..90490,91606..91699,92489..92509,95202..95327,95607..95740,96618..96696,97668..97754,98616..98762,100887..100946,102826..102964,104262..104384,105223..105318,105984..106078,107258..107328,109870..110071,110482..110609,115374..115458,123171..123254,124264..124428))
location: region:87655-124428:-1
so has part: feature:124264-124428:-1:exon
so has part: feature:123171-123254:-1:exon
so has part: feature:115374-115458:-1:exon
so has part: feature:110482-110609:-1:exon
so has part: feature:109870-110071:-1:exon
so has part: feature:107258-107328:-1:exon
so has part: feature:105984-106078:-1:exon
so has part: feature:105223-105318:-1:exon
so has part: feature:104262-104384:-1:exon
so has part: feature:102826-102964:-1:exon
so has part: feature:100887-100946:-1:exon
so has part: feature:98616-98762:-1:exon
so has part: feature:97668-97754:-1:exon
so has part: feature:96618-96696:-1:exon
so has part: feature:95607-95740:-1:exon
so has part: feature:95202-95327:-1:exon
so has part: feature:92489-92509:-1:exon
so has part: feature:91606-91699:-1:exon
so has part: feature:90401-90490:-1:exon
so has part: feature:89593-89692:-1:exon
so has part: feature:88716-88770:-1:exon
so has part: feature:87655-87795:-1:exon

XP_030823856.1
type: Protein
SIO_000068: ncbiprotein

position:87655:-1
position: 87655
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:124428:-1
position: 124428
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:124264-124428:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:123171-123254:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:115374-115458:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:110482-110609:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:109870-110071:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:107258-107328:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:105984-106078:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:105223-105318:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:104262-104384:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:102826-102964:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:100887-100946:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:98616-98762:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:97668-97754:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:96618-96696:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:95607-95740:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:95202-95327:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:92489-92509:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:91606-91699:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:90401-90490:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:89593-89692:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:88716-88770:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:87655-87795:-1:exon

ARHGEF6
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 87175
gene: ARHGEF6
product: Rac/Cdc42 guanine nucleotide exchange factor 6, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 ESTs, 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_030967995.1
SIO_010081: ARHGEF6
subclass of: SO_0000673
so part of: ARHGEF6
location: complement(join(87655..87795,88716..88770,89593..89692,90401..90490,91606..91699,92489..92509,95202..95327,95607..95740,96618..96696,97668..97754,98616..98762,100887..100946,102826..102964,104262..104384,105223..105318,105984..106078,107258..107328,109870..110071,110482..110609,115374..115458,118386..118475))
location: region:87655-118475:-1
so has part: feature:118386-118475:-1:exon
so has part: feature:115374-115458:-1:exon
so has part: feature:110482-110609:-1:exon
so has part: feature:109870-110071:-1:exon
so has part: feature:107258-107328:-1:exon
so has part: feature:105984-106078:-1:exon
so has part: feature:105223-105318:-1:exon
so has part: feature:104262-104384:-1:exon
so has part: feature:102826-102964:-1:exon
so has part: feature:100887-100946:-1:exon
so has part: feature:98616-98762:-1:exon
so has part: feature:97668-97754:-1:exon
so has part: feature:96618-96696:-1:exon
so has part: feature:95607-95740:-1:exon
so has part: feature:95202-95327:-1:exon
so has part: feature:92489-92509:-1:exon
so has part: feature:91606-91699:-1:exon
so has part: feature:90401-90490:-1:exon
so has part: feature:89593-89692:-1:exon
so has part: feature:88716-88770:-1:exon
so has part: feature:87655-87795:-1:exon

position:118475:-1
position: 118475
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:118386-118475:-1:exon

position:118386:-1
position: 118386
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:115374-115458:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:110482-110609:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:109870-110071:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:107258-107328:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:105984-106078:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:105223-105318:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:104262-104384:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:102826-102964:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:100887-100946:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:98616-98762:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:97668-97754:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:96618-96696:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:95607-95740:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:95202-95327:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:92489-92509:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:91606-91699:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:90401-90490:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:89593-89692:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:88716-88770:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:87655-87795:-1:exon

ARHGEF6
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 87175
gene: ARHGEF6
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: rho guanine nucleotide exchange factor 6 isoform X1
translation: MTENGSHQLVVKARFNFKQTNEDELSVNKGDIIYVTRVEEGGWWEGTLNGKTGWFPSNYVREIKSADKPLSPKALKGLENTQMTKNYYPVVLQNILETERDYAKELQSLLGTYLRPLQSCDKLSTGDITALLGNMEEISAFQQTLNQALEEVAKLPENQQRVGGCFMNLMPQFRSLYLTYCANHPSAVNVLTQHSDELEKFMESQGAASPGILILTTSLSKPFLRLDKYVTLLQELERHMEEAHADHEDVLKAITSFKSLVSQCQELRKRKQLELQILSESIQRWEGEDIKMMGNVIYMSQVMVQSGGSEEKEERYFLLFSNVLLMLSASPRMSGFIYQGKLPLTGMILTKLEDAEGNEHMFEITGNMMERITVSCSTSQDLHEWVDHLQRLTKGTCSTVSKTQSWSPHSTFSSAGQIRGPLEPPKILKPWSLSCLRPAPPLRPSAALSYKEDSSKSPKTMKKFLPKRKTERKPSDEEFVIRKSTAALEEDAQILKVIEAYCTGAGFQQALSSGSRKDSIPQVLLPEEEKIIIEETRSNGQTVTEEKSLVDTVYALKDEVKELKQENKRMKQCLEEELKSRKDLEKLVRRLLKQTDECGREDTGRKSSLIA
SIO_010081: ARHGEF6
subclass of: SO_0000673
so part of: ARHGEF6
location: complement(join(87655..87795,88716..88770,89593..89692,90401..90490,91606..91699,95202..95327,95607..95740,96618..96696,97668..97754,98616..98762,100887..100946,102826..102964,104262..104384,105223..105318,105984..106078,107258..107328,109870..110068))
location: region:87655-110068:-1
so has part: feature:109870-110068:-1:exon
so has part: feature:107258-107328:-1:exon
so has part: feature:105984-106078:-1:exon
so has part: feature:105223-105318:-1:exon
so has part: feature:104262-104384:-1:exon
so has part: feature:102826-102964:-1:exon
so has part: feature:100887-100946:-1:exon
so has part: feature:98616-98762:-1:exon
so has part: feature:97668-97754:-1:exon
so has part: feature:96618-96696:-1:exon
so has part: feature:95607-95740:-1:exon
so has part: feature:95202-95327:-1:exon
so has part: feature:91606-91699:-1:exon
so has part: feature:90401-90490:-1:exon
so has part: feature:89593-89692:-1:exon
so has part: feature:88716-88770:-1:exon
so has part: feature:87655-87795:-1:exon

XP_030823854.1
type: Protein
SIO_000068: ncbiprotein

position:110068:-1
position: 110068
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:109870-110068:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:107258-107328:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:105984-106078:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:105223-105318:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:104262-104384:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:102826-102964:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:100887-100946:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:98616-98762:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:97668-97754:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:96618-96696:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:95607-95740:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:95202-95327:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:91606-91699:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:90401-90490:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:89593-89692:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:88716-88770:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:87655-87795:-1:exon

ARHGEF6
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 87175
gene: ARHGEF6
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: rho guanine nucleotide exchange factor 6 isoform X2
translation: MTENGSHQLVVKARFNFKQTNEDELSVNKGDIIYVTRVEEGGWWEGTLNGKTGWFPSNYVREIKSADKPLSPKALKGLENTQMTKNYYPVVLQNILETERDYAKELQSLLGTYLRPLQSCDKLSTGDITALLGNMEEISAFQQTLNQALEEVAKLPENQQRVGGCFMNLMPQFRSLYLTYCANHPSAVNVLTQHSDELEKFMESQGAASPGILILTTSLSKPFLRLDKYVTLLQELERHMEEAHADHEDVLKAITSFKSLVSQCQELRKRKQLELQILSESIQRWEGEDIKMMGNVIYMSQVMVQSGGSEEKEERYFLLFSNVLLMLSASPRMSGFIYQGKLPLTGMILTKLEDAEGNEHMFEITGNMMERITVSCSTSQDLHEWVDHLQRLTKGTCSTVSKTQSWSPHSTFSSAGQIRGPLEPPKILKPWSLSCLRPAPPLRPSAALSYKERMSYILKDSSKSPKTMKKFLPKRKTERKPSDEEFVIRKSTAALEEDAQILKVIEAYCTGAGFQQALSSGSRKDSIPQVLLPEEEKIIIEETRSNGQTVTEEKSLVDTVYALKDEVKELKQENKRMKQCLEEELKSRKDLEKLVRRLLKQTDECGREDTGRKSSLIA
SIO_010081: ARHGEF6
subclass of: SO_0000673
so part of: ARHGEF6
location: complement(join(87655..87795,88716..88770,89593..89692,90401..90490,91606..91699,92489..92509,95202..95327,95607..95740,96618..96696,97668..97754,98616..98762,100887..100946,102826..102964,104262..104384,105223..105318,105984..106078,107258..107328,109870..110068))
location: region:87655-110068:-1
so has part: feature:109870-110068:-1:exon
so has part: feature:107258-107328:-1:exon
so has part: feature:105984-106078:-1:exon
so has part: feature:105223-105318:-1:exon
so has part: feature:104262-104384:-1:exon
so has part: feature:102826-102964:-1:exon
so has part: feature:100887-100946:-1:exon
so has part: feature:98616-98762:-1:exon
so has part: feature:97668-97754:-1:exon
so has part: feature:96618-96696:-1:exon
so has part: feature:95607-95740:-1:exon
so has part: feature:95202-95327:-1:exon
so has part: feature:92489-92509:-1:exon
so has part: feature:91606-91699:-1:exon
so has part: feature:90401-90490:-1:exon
so has part: feature:89593-89692:-1:exon
so has part: feature:88716-88770:-1:exon
so has part: feature:87655-87795:-1:exon

XP_030823855.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:109870-110068:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:107258-107328:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:105984-106078:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:105223-105318:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:104262-104384:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:102826-102964:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:100887-100946:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:98616-98762:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:97668-97754:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:96618-96696:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:95607-95740:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:95202-95327:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:92489-92509:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:91606-91699:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:90401-90490:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:89593-89692:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:88716-88770:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:87655-87795:-1:exon

RBMX
type: Gene
subclass of: SO_0000704
RO_0002162: 87175
gene: RBMX
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(127429..142688)
location: region:127429-142688:-1
so has part: feature:127429-142688:-1:exon
subclass of: SO_0000010

115915041
type: Gene
SIO_000068: ncbigene

position:127429:-1
position: 127429
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:142688:-1
position: 142688
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:127429-142688:-1:exon

RBMX
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 87175
gene: RBMX
product: RNA binding motif protein X-linked
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 28 ESTs, 11 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XM_030967997.1
SIO_010081: RBMX
subclass of: SO_0000673
so part of: RBMX
location: complement(join(127429..128130,130553..132784,133289..133377,133469..133594,133708..133822,134174..134290,135359..135530,140950..141056,141254..141383,142611..142688))
location: region:127429-142688:-1
so has part: feature:142611-142688:-1:exon
so has part: feature:141254-141383:-1:exon
so has part: feature:140950-141056:-1:exon
so has part: feature:135359-135530:-1:exon
so has part: feature:134174-134290:-1:exon
so has part: feature:133708-133822:-1:exon
so has part: feature:133469-133594:-1:exon
so has part: feature:133289-133377:-1:exon
so has part: feature:130553-132784:-1:exon
so has part: feature:127429-128130:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:142611-142688:-1:exon

position:142611:-1
position: 142611
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:141254-141383:-1:exon

position:141254:-1
position: 141254
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:141383:-1
position: 141383
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:140950-141056:-1:exon

position:140950:-1
position: 140950
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:141056:-1
position: 141056
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:135359-135530:-1:exon

position:135359:-1
position: 135359
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:135530:-1
position: 135530
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:134174-134290:-1:exon

position:134174:-1
position: 134174
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:134290:-1
position: 134290
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:133708-133822:-1:exon

position:133708:-1
position: 133708
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:133822:-1
position: 133822
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:133469-133594:-1:exon

position:133469:-1
position: 133469
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:133594:-1
position: 133594
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:133289-133377:-1:exon

position:133289:-1
position: 133289
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:133377:-1
position: 133377
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:130553-132784:-1:exon

position:130553:-1
position: 130553
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:132784:-1
position: 132784
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:127429-128130:-1:exon

position:128130:-1
position: 128130
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

RBMX
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 87175
gene: RBMX
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: RNA-binding motif protein, X chromosome
translation: MVEADRPGKLFIGGLNTETNEKALEAVFGKYGRIVEVLLMKDRETNKSRGFAFVTFESPADAKDAARDMNGKSLDGKAIKVEQATKPSFESGGRRGPPPPPRSRGPPRGLRGARGGSGARGPPSRGSHLGSSRGPLPMKRGPPPRSGGPPPKRSAPSGPVRSSSMGGRAPVSRGRDGYGGPPRREPMPSRRDVYMSPRDDGYSTKDGYSSRDYPSSRDTRDYAPPPRDYAYRDYGHSSSRDEYPSRGYSDRDGYGGGRDRDYSDHPSGGSYRDSYESYGNSRSAPPARGPPPSYGGSSRYDDYGSTRDGYGSRESYSSSRSDVYSSGRDRVGRQDRGLPPSMERGYPPPRDSYSSSSRGAPRGGGRGGSRSDRGGGRSRY
SIO_010081: RBMX
subclass of: SO_0000673
so part of: RBMX
location: complement(join(132477..132784,133289..133377,133469..133594,133708..133822,134174..134290,135359..135530,140950..141056,141254..141362))
location: region:132477-141362:-1
so has part: feature:141254-141362:-1:exon
so has part: feature:140950-141056:-1:exon
so has part: feature:135359-135530:-1:exon
so has part: feature:134174-134290:-1:exon
so has part: feature:133708-133822:-1:exon
so has part: feature:133469-133594:-1:exon
so has part: feature:133289-133377:-1:exon
so has part: feature:132477-132784:-1:exon

XP_030823857.1
type: Protein
SIO_000068: ncbiprotein

position:132477:-1
position: 132477
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:141362:-1
position: 141362
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:141254-141362:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:140950-141056:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:135359-135530:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:134174-134290:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:133708-133822:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:133469-133594:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:133289-133377:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:132477-132784:-1:exon

LOC115915050
type: Gene
subclass of: SO_0000704
RO_0002162: 87175
gene: LOC115915050
note: Derived by automated computational analysis using gene prediction method: cmsearch.
so part of: sequence
location: complement(141130..141201)
location: region:141130-141201:-1
so has part: feature:141130-141201:-1:exon
subclass of: SO_0000578

115915050
type: Gene
SIO_000068: ncbigene

position:141130:-1
position: 141130
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:141201:-1
position: 141201
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:141130-141201:-1:exon

LOC115915050
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 87175
nc RNA class: snoRNA
gene: LOC115915050
product: small nucleolar RNA SNORD61
inference: COORDINATES: nucleotide motif:Rfam:12.0:RF00270
inference: COORDINATES: profile:INFERNAL:1.1.1
note: Derived by automated computational analysis using gene prediction method: cmsearch.
transcript id: XR_004061474.1
SIO_010081: LOC115915050
subclass of: SO_0000673
so part of: LOC115915050
location: complement(141130..141201)
location: region:141130-141201:-1
so has part: feature:141130-141201:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:141130-141201:-1:exon

LOC115914813
type: Gene
subclass of: SO_0000704
RO_0002162: 87175
gene: LOC115914813
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 146867..174650
location: region:146867-174650:1
so has part: feature:146867-174650:1:exon
subclass of: SO_0000010

115914813
type: Gene
SIO_000068: ncbigene

position:146867:1
position: 146867
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:174650:1
position: 174650
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:146867-174650:1:exon

LOC115914813
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 87175
gene: LOC115914813
product: transmembrane 9 superfamily member 2-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 mRNAs, 13 ESTs, 16 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_030967587.1
SIO_010081: LOC115914813
subclass of: SO_0000673
so part of: LOC115914813
location: join(146867..147097,147470..147537,148834..148927,150484..150611,150836..150965,151913..152040,153230..153341,155465..155544,156456..156564,159737..159869,160871..160990,161168..161225,164109..164268,164911..165062,166001..166112,166531..166702,174016..174650)
location: region:146867-174650:1
so has part: feature:146867-147097:1:exon
so has part: feature:147470-147537:1:exon
so has part: feature:148834-148927:1:exon
so has part: feature:150484-150611:1:exon
so has part: feature:150836-150965:1:exon
so has part: feature:151913-152040:1:exon
so has part: feature:153230-153341:1:exon
so has part: feature:155465-155544:1:exon
so has part: feature:156456-156564:1:exon
so has part: feature:159737-159869:1:exon
so has part: feature:160871-160990:1:exon
so has part: feature:161168-161225:1:exon
so has part: feature:164109-164268:1:exon
so has part: feature:164911-165062:1:exon
so has part: feature:166001-166112:1:exon
so has part: feature:166531-166702:1:exon
so has part: feature:174016-174650:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:146867-147097:1:exon

position:147097:1
position: 147097
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:147470-147537:1:exon

position:147470:1
position: 147470
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:147537:1
position: 147537
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:148834-148927:1:exon

position:148834:1
position: 148834
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:148927:1
position: 148927
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:150484-150611:1:exon

position:150484:1
position: 150484
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:150611:1
position: 150611
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:150836-150965:1:exon

position:150836:1
position: 150836
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:150965:1
position: 150965
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:151913-152040:1:exon

position:151913:1
position: 151913
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:152040:1
position: 152040
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:153230-153341:1:exon

position:153230:1
position: 153230
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:153341:1
position: 153341
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:155465-155544:1:exon

position:155465:1
position: 155465
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:155544:1
position: 155544
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:156456-156564:1:exon

position:156456:1
position: 156456
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:156564:1
position: 156564
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:159737-159869:1:exon

position:159737:1
position: 159737
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:159869:1
position: 159869
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:160871-160990:1:exon

position:160871:1
position: 160871
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:160990:1
position: 160990
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:161168-161225:1:exon

position:161168:1
position: 161168
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:161225:1
position: 161225
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:164109-164268:1:exon

position:164109:1
position: 164109
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:164268:1
position: 164268
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:164911-165062:1:exon

position:164911:1
position: 164911
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:165062:1
position: 165062
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:166001-166112:1:exon

position:166001:1
position: 166001
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:166112:1
position: 166112
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:166531-166702:1:exon

position:166531:1
position: 166531
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:166702:1
position: 166702
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:174016-174650:1:exon

position:174016:1
position: 174016
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC115914813
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 87175
gene: LOC115914813
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: transmembrane 9 superfamily member 2-like
translation: MRLLVAALLLVAPLGAAFYLPGLAPVSFCEESEQTESCKSLIELFVNRLDSVESVLPYEYDAFDFCQDKEEKRPSENLGQVLFGERIASSPYKFTFKKQETCKKVCTRSYDPGNSADKSKLAFLKKGMQLNYQHHWIIDNMPVTWCYDVEDGQKYCNPGFPIGCFVTPDGRVKDACVINSEFNKKNTFYLFNHVDITIMYHSGKDENWPGARLVMARLRPQSYKHTDENNLSCEGPPMEIPGEFTNKLNLVYTYSVTFEEKNNIKWASRWDYILESMPHTNIQWFSIMNSLVIVLFLSGMVAMIILRTLHKDIARYNQIDSSEDAQEEFGWKLVHGDVFRPPRKGMLLSVFLGQGTQIFIMTFITLFLACLGFLSPANRGALMTCAVVLWVLLGTPAGYVSARMYKTFRGEKWKTNVLLTALLCPGIVFADFFIMNLILWVKGSSAAIPFGTLVAILAMWFGISVPLTFVGAYFGFKERPIEHPVRTNQIPRQIPEQSFFTKPLPGIIMGGILPFGCIFIQLFFILNSIWSHQMYYMFGFLFLVFIILLITCSEATVLLCYFHLCAEDYHWWWRSFLTSSFTAVYLFIYAVHYFFSKLQITGTASTILYFGYTMIMVLIFFLFTGTIGFFACFWFVSKIYSVVKVD
SIO_010081: LOC115914813
subclass of: SO_0000673
so part of: LOC115914813
location: join(146981..147097,147470..147537,148834..148927,150484..150611,150836..150965,151913..152040,153230..153341,155465..155544,156456..156564,159737..159869,160871..160990,161168..161225,164109..164268,164911..165062,166001..166112,166531..166702,174016..174083)
location: region:146981-174083:1
so has part: feature:146981-147097:1:exon
so has part: feature:147470-147537:1:exon
so has part: feature:148834-148927:1:exon
so has part: feature:150484-150611:1:exon
so has part: feature:150836-150965:1:exon
so has part: feature:151913-152040:1:exon
so has part: feature:153230-153341:1:exon
so has part: feature:155465-155544:1:exon
so has part: feature:156456-156564:1:exon
so has part: feature:159737-159869:1:exon
so has part: feature:160871-160990:1:exon
so has part: feature:161168-161225:1:exon
so has part: feature:164109-164268:1:exon
so has part: feature:164911-165062:1:exon
so has part: feature:166001-166112:1:exon
so has part: feature:166531-166702:1:exon
so has part: feature:174016-174083:1:exon

XP_030823447.1
type: Protein
SIO_000068: ncbiprotein

position:146981:1
position: 146981
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:174083:1
position: 174083
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:146981-147097:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:147470-147537:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:148834-148927:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:150484-150611:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:150836-150965:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:151913-152040:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:153230-153341:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:155465-155544:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:156456-156564:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:159737-159869:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:160871-160990:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:161168-161225:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:164109-164268:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:164911-165062:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:166001-166112:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:166531-166702:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:174016-174083:1:exon

ZIC3
type: Gene
subclass of: SO_0000704
RO_0002162: 87175
gene: ZIC3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 283978..291072
location: region:283978-291072:1
so has part: feature:283978-291072:1:exon
subclass of: SO_0000010

115914974
type: Gene
SIO_000068: ncbigene

position:283978:1
position: 283978
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:291072:1
position: 291072
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:283978-291072:1:exon

ZIC3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 87175
gene: ZIC3
product: Zic family member 3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 ESTs, 25 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_030967882.1
SIO_010081: ZIC3
subclass of: SO_0000673
so part of: ZIC3
location: join(283978..285055,285682..285845,286289..291072)
location: region:283978-291072:1
so has part: feature:283978-285055:1:exon
so has part: feature:285682-285845:1:exon
so has part: feature:286289-291072:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:283978-285055:1:exon

position:285055:1
position: 285055
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:285682-285845:1:exon

position:285682:1
position: 285682
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:285845:1
position: 285845
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:286289-291072:1:exon

position:286289:1
position: 286289
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

ZIC3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 87175
gene: ZIC3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: zinc finger protein ZIC 3
translation: MTMLLDGGPQFPALGVGGFAAPRHHEMPGRDAGGGGMGLGPFGDSSHAAAFKLNAAPHDLAAGQSSAFTPQAPGYASALGHHHHHHHHAGQVPSYGGAAAFNSTRDFLFRNRGSGIADAASGTAQHGLFGGSPGGLHGPGGIPDTPGYLLFPGLHEQSPSHTSPNGHVDNGQMHLGLRGDLFGRPDPYRAVSSPRTDPYAGAQFHNYNHMNMNMGMNVAAHHHHHHHGPGAFFRYMRQPIKQELSCKWLDESQLSRPKKSCDRTFSTMHELVTHVTMEHVGGPEQNNHICYWDECPREGKSFKAKYKLVNHIRVHTGEKPFPCPFPGCGKIFARSENLKIHKRTHTGEKPFKCEFEGCDRRFANSSDRKKHMHVHTSDKPYICKVCDKSYTHPSSLRKHMKVHESQGSDSSPAASSGYESSTPPAVGSAGSKDSTKTPLAALQSNPGHNPGLPPNFNEWYV
SIO_010081: ZIC3
subclass of: SO_0000673
so part of: ZIC3
location: join(284017..285055,285682..285845,286289..286471)
location: region:284017-286471:1
so has part: feature:284017-285055:1:exon
so has part: feature:285682-285845:1:exon
so has part: feature:286289-286471:1:exon

XP_030823742.1
type: Protein
SIO_000068: ncbiprotein

position:284017:1
position: 284017
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:286471:1
position: 286471
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:284017-285055:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:285682-285845:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:286289-286471:1:exon

LOC115915022
type: Gene
subclass of: SO_0000704
RO_0002162: 87175
gene: LOC115915022
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 354754..356026
location: region:354754-356026:1
so has part: feature:354754-356026:1:exon
subclass of: SO_0000011

115915022
type: Gene
SIO_000068: ncbigene

position:354754:1
position: 354754
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:356026:1
position: 356026
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:354754-356026:1:exon

LOC115915022
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 87175
nc RNA class: lncRNA
gene: LOC115915022
product: uncharacterized LOC115915022
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XR_004061464.1
SIO_010081: LOC115915022
subclass of: SO_0000673
so part of: LOC115915022
location: join(354754..354839,355627..355723,355824..356026)
location: region:354754-356026:1
so has part: feature:354754-354839:1:exon
so has part: feature:355627-355723:1:exon
so has part: feature:355824-356026:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:354754-354839:1:exon

position:354839:1
position: 354839
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:355627-355723:1:exon

position:355627:1
position: 355627
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:355723:1
position: 355723
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:355824-356026:1:exon

position:355824:1
position: 355824
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

FGF13
type: Gene
subclass of: SO_0000704
RO_0002162: 87175
gene: FGF13
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(484051..674143)
location: region:484051-674143:-1
so has part: feature:484051-674143:-1:exon
subclass of: SO_0000010

115914710
type: Gene
SIO_000068: ncbigene

position:484051:-1
position: 484051
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:674143:-1
position: 674143
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:484051-674143:-1:exon

FGF13
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 87175
gene: FGF13
product: fibroblast growth factor 13, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 mRNAs, 12 ESTs, 23 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XM_030967389.1
SIO_010081: FGF13
subclass of: SO_0000673
so part of: FGF13
location: complement(join(484051..485574,486034..486232,521138..521241,524994..525104,673962..674143))
location: region:484051-674143:-1
so has part: feature:673962-674143:-1:exon
so has part: feature:524994-525104:-1:exon
so has part: feature:521138-521241:-1:exon
so has part: feature:486034-486232:-1:exon
so has part: feature:484051-485574:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:673962-674143:-1:exon

position:673962:-1
position: 673962
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:524994-525104:-1:exon

position:524994:-1
position: 524994
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:525104:-1
position: 525104
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:521138-521241:-1:exon

position:521138:-1
position: 521138
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:521241:-1
position: 521241
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:486034-486232:-1:exon

position:486034:-1
position: 486034
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:486232:-1
position: 486232
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:484051-485574:-1:exon

position:485574:-1
position: 485574
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

FGF13
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 87175
gene: FGF13
product: fibroblast growth factor 13, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 12 ESTs, 32 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
transcript id: XM_030967386.1
SIO_010081: FGF13
subclass of: SO_0000673
so part of: FGF13
location: complement(join(484051..485574,486034..486232,521138..521241,524994..525104,568728..568895,673962..674143))
location: region:484051-674143:-1
so has part: feature:673962-674143:-1:exon
so has part: feature:568728-568895:-1:exon
so has part: feature:524994-525104:-1:exon
so has part: feature:521138-521241:-1:exon
so has part: feature:486034-486232:-1:exon
so has part: feature:484051-485574:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:673962-674143:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:568728-568895:-1:exon

position:568728:-1
position: 568728
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:568895:-1
position: 568895
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:524994-525104:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:521138-521241:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:486034-486232:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:484051-485574:-1:exon

FGF13
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 87175
gene: FGF13
product: fibroblast growth factor 13, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 12 ESTs, 23 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_030967390.1
SIO_010081: FGF13
subclass of: SO_0000673
so part of: FGF13
location: complement(join(484051..485574,486034..486232,521138..521241,524994..525104,539767..540547))
location: region:484051-540547:-1
so has part: feature:539767-540547:-1:exon
so has part: feature:524994-525104:-1:exon
so has part: feature:521138-521241:-1:exon
so has part: feature:486034-486232:-1:exon
so has part: feature:484051-485574:-1:exon

position:540547:-1
position: 540547
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:539767-540547:-1:exon

position:539767:-1
position: 539767
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:524994-525104:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:521138-521241:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:486034-486232:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:484051-485574:-1:exon

FGF13
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 87175
gene: FGF13
product: fibroblast growth factor 13, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 mRNAs, 12 ESTs, 35 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XM_030967388.1
SIO_010081: FGF13
subclass of: SO_0000673
so part of: FGF13
location: complement(join(484051..485574,486034..486232,521138..521241,524994..525104,527046..527674))
location: region:484051-527674:-1
so has part: feature:527046-527674:-1:exon
so has part: feature:524994-525104:-1:exon
so has part: feature:521138-521241:-1:exon
so has part: feature:486034-486232:-1:exon
so has part: feature:484051-485574:-1:exon

position:527674:-1
position: 527674
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:527046-527674:-1:exon

position:527046:-1
position: 527046
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:524994-525104:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:521138-521241:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:486034-486232:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:484051-485574:-1:exon

FGF13
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 87175
gene: FGF13
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: fibroblast growth factor 13 isoform X3
translation: MSGKVIKPKEEKDASKEPQLKGIVTKLYSRQGYHLQLQADGTIDGTKEEDSSYTLFNLIPVGLRVVAIQGVQTKLYLAMNSEGYLYTSEHFTPECKFKESVFENYYVTYSSMIYRQQQSGRGWYLGLNKEGEIMKGNHVKKNKPAAHFLPKPLKVAMYKEPSLHDLTEFSRSGSGTPTKSRSVSGVLNGGKSMSQNEST
SIO_010081: FGF13
subclass of: SO_0000673
so part of: FGF13
location: complement(join(485438..485574,486034..486232,521138..521241,524994..525104,673962..674010))
location: region:485438-674010:-1
so has part: feature:673962-674010:-1:exon
so has part: feature:524994-525104:-1:exon
so has part: feature:521138-521241:-1:exon
so has part: feature:486034-486232:-1:exon
so has part: feature:485438-485574:-1:exon

XP_030823249.1
type: Protein
SIO_000068: ncbiprotein

position:485438:-1
position: 485438
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:674010:-1
position: 674010
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:673962-674010:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:524994-525104:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:521138-521241:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:486034-486232:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:485438-485574:-1:exon

FGF13
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 87175
gene: FGF13
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: fibroblast growth factor 13 isoform X1
translation: MSGKVIKPKEEKDASKVMDDAPPGTQEYIMLRQDSIQSAELKKKESPFRAKCHEIFCCPLKQVHLKENTEPEEPQLKGIVTKLYSRQGYHLQLQADGTIDGTKEEDSSYTLFNLIPVGLRVVAIQGVQTKLYLAMNSEGYLYTSEHFTPECKFKESVFENYYVTYSSMIYRQQQSGRGWYLGLNKEGEIMKGNHVKKNKPAAHFLPKPLKVAMYKEPSLHDLTEFSRSGSGTPTKSRSVSGVLNGGKSMSQNEST
SIO_010081: FGF13
subclass of: SO_0000673
so part of: FGF13
location: complement(join(485438..485574,486034..486232,521138..521241,524994..525104,568728..568895,673962..674010))
location: region:485438-674010:-1
so has part: feature:673962-674010:-1:exon
so has part: feature:568728-568895:-1:exon
so has part: feature:524994-525104:-1:exon
so has part: feature:521138-521241:-1:exon
so has part: feature:486034-486232:-1:exon
so has part: feature:485438-485574:-1:exon

XP_030823246.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:673962-674010:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:568728-568895:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:524994-525104:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:521138-521241:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:486034-486232:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:485438-485574:-1:exon

FGF13
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 87175
gene: FGF13
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: fibroblast growth factor 13 isoform X4
translation: MALGIRKSYSEPQLKGIVTKLYSRQGYHLQLQADGTIDGTKEEDSSYTLFNLIPVGLRVVAIQGVQTKLYLAMNSEGYLYTSEHFTPECKFKESVFENYYVTYSSMIYRQQQSGRGWYLGLNKEGEIMKGNHVKKNKPAAHFLPKPLKVAMYKEPSLHDLTEFSRSGSGTPTKSRSVSGVLNGGKSMSQNEST
SIO_010081: FGF13
subclass of: SO_0000673
so part of: FGF13
location: complement(join(485438..485574,486034..486232,521138..521241,524994..525104,539767..539797))
location: region:485438-539797:-1
so has part: feature:539767-539797:-1:exon
so has part: feature:524994-525104:-1:exon
so has part: feature:521138-521241:-1:exon
so has part: feature:486034-486232:-1:exon
so has part: feature:485438-485574:-1:exon

XP_030823250.1
type: Protein
SIO_000068: ncbiprotein

position:539797:-1
position: 539797
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:539767-539797:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:524994-525104:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:521138-521241:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:486034-486232:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:485438-485574:-1:exon

FGF13
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 87175
gene: FGF13
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: fibroblast growth factor 13 isoform X2
translation: MAAAIASSLIRQKRQAREREKSNACKCVNSPSKSKGSCDKNKLNVFSRVKLFGSKKRRRRRPEPQLKGIVTKLYSRQGYHLQLQADGTIDGTKEEDSSYTLFNLIPVGLRVVAIQGVQTKLYLAMNSEGYLYTSEHFTPECKFKESVFENYYVTYSSMIYRQQQSGRGWYLGLNKEGEIMKGNHVKKNKPAAHFLPKPLKVAMYKEPSLHDLTEFSRSGSGTPTKSRSVSGVLNGGKSMSQNEST
SIO_010081: FGF13
subclass of: SO_0000673
so part of: FGF13
location: complement(join(485438..485574,486034..486232,521138..521241,524994..525104,527046..527232))
location: region:485438-527232:-1
so has part: feature:527046-527232:-1:exon
so has part: feature:524994-525104:-1:exon
so has part: feature:521138-521241:-1:exon
so has part: feature:486034-486232:-1:exon
so has part: feature:485438-485574:-1:exon

XP_030823248.1
type: Protein
SIO_000068: ncbiprotein

position:527232:-1
position: 527232
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:527046-527232:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:524994-525104:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:521138-521241:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:486034-486232:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:485438-485574:-1:exon

F9
type: Gene
subclass of: SO_0000704
RO_0002162: 87175
gene: F9
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 710660..721433
location: region:710660-721433:1
so has part: feature:710660-721433:1:exon
subclass of: SO_0000010

115914883
type: Gene
SIO_000068: ncbigene

position:710660:1
position: 710660
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:721433:1
position: 721433
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:710660-721433:1:exon

F9
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 87175
gene: F9
product: coagulation factor IX
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 27 Proteins
transcript id: XM_030967716.1
SIO_010081: F9
subclass of: SO_0000673
so part of: F9
location: join(710660..710726,712091..712254,712582..712606,714336..714449,716624..716752,718335..718591,719087..719210,720886..721433)
location: region:710660-721433:1
so has part: feature:710660-710726:1:exon
so has part: feature:712091-712254:1:exon
so has part: feature:712582-712606:1:exon
so has part: feature:714336-714449:1:exon
so has part: feature:716624-716752:1:exon
so has part: feature:718335-718591:1:exon
so has part: feature:719087-719210:1:exon
so has part: feature:720886-721433:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:710660-710726:1:exon

position:710726:1
position: 710726
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:712091-712254:1:exon

position:712091:1
position: 712091
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:712254:1
position: 712254
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:712582-712606:1:exon

position:712582:1
position: 712582
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:712606:1
position: 712606
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:714336-714449:1:exon

position:714336:1
position: 714336
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:714449:1
position: 714449
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:716624-716752:1:exon

position:716624:1
position: 716624
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:716752:1
position: 716752
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:718335-718591:1:exon

position:718335:1
position: 718335
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:718591:1
position: 718591
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:719087-719210:1:exon

position:719087:1
position: 719087
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:719210:1
position: 719210
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:720886-721433:1:exon

position:720886:1
position: 720886
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

F9
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 87175
gene: F9
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: coagulation factor IX
translation: MAKGPLTLSLCLLGAWLAAGNTVFLGSREASSVLQRQRRANSNRLEEVIPGNLERECIEEKCSYEEAREVFENEEKTMQFWQTYVDGDQCKPNPCKNGAICKDQINSYVCWCPAGYEGKNCEIDFTCAIKNGGCKHFCSHQPPQKVVCSCAPGYKLHEDGKSCEPTVPFPCGRITAPEAKRKLTRSMNTFEHWNSTGEEPEAEEGPEEGPEEGQDNATESSTAAPSRITPVLRTGTRVVGGSDSMKGEVPWQVLLVNSQGVGFCGATIINEKWLVTAAHCLKPGYTHNLTAVAGEHDVRSDDHTEQLRKVVRLLPHPTYNASINEYHNDIALLELDQPLTFNSYVTPVCLGSREFTNALLKQGVGTVSGWGKVLFRGRAATTLQVLRVPFVDRPTCLKSTSTSILQNMFCAGFPSGGRDTCEGDSGGPYTTEIEGTWFLTGITSWGEECALPGKYGIYTRVSKYVKWIKQTTRLP
SIO_010081: F9
subclass of: SO_0000673
so part of: F9
location: join(710660..710726,712091..712254,712582..712606,714336..714449,716624..716752,718335..718591,719087..719210,720886..721433)
location: region:710660-721433:1
so has part: feature:710660-710726:1:exon
so has part: feature:712091-712254:1:exon
so has part: feature:712582-712606:1:exon
so has part: feature:714336-714449:1:exon
so has part: feature:716624-716752:1:exon
so has part: feature:718335-718591:1:exon
so has part: feature:719087-719210:1:exon
so has part: feature:720886-721433:1:exon

XP_030823576.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:710660-710726:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:712091-712254:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:712582-712606:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:714336-714449:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:716624-716752:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:718335-718591:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:719087-719210:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:720886-721433:1:exon

MCF2
type: Gene
subclass of: SO_0000704
RO_0002162: 87175
gene: MCF2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(723973..776954)
location: region:723973-776954:-1
so has part: feature:723973-776954:-1:exon
subclass of: SO_0000010

115914749
type: Gene
SIO_000068: ncbigene

position:723973:-1
position: 723973
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:776954:-1
position: 776954
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:723973-776954:-1:exon

MCF2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 87175
gene: MCF2
product: MCF.2 cell line derived transforming sequence
exception: unclassified transcription discrepancy
note: The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: deleted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, 18 Proteins, and 94% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_030967467.1
SIO_010081: MCF2
subclass of: SO_0000673
so part of: MCF2
location: complement(join(723973..724182,728839..728939,730352..730464,730714..730826,730899..730990,731379..731445,731970..732048,732311..732403,734093..734314,735041..735166,736126..736218,736541..736633,736930..736999,737096..737211,737819..737885,738112..738200,738797..738885,742366..742537,742757..742948,744971..745162,746998..747117,747476..747590,748043..748168,750911..751060,751701..751817,752523..752642,759551..759641,765227..765341,765835..765903,776824..776954))
location: region:723973-776954:-1
so has part: feature:776824-776954:-1:exon
so has part: feature:765835-765903:-1:exon
so has part: feature:765227-765341:-1:exon
so has part: feature:759551-759641:-1:exon
so has part: feature:752523-752642:-1:exon
so has part: feature:751701-751817:-1:exon
so has part: feature:750911-751060:-1:exon
so has part: feature:748043-748168:-1:exon
so has part: feature:747476-747590:-1:exon
so has part: feature:746998-747117:-1:exon
so has part: feature:744971-745162:-1:exon
so has part: feature:742757-742948:-1:exon
so has part: feature:742366-742537:-1:exon
so has part: feature:738797-738885:-1:exon
so has part: feature:738112-738200:-1:exon
so has part: feature:737819-737885:-1:exon
so has part: feature:737096-737211:-1:exon
so has part: feature:736930-736999:-1:exon
so has part: feature:736541-736633:-1:exon
so has part: feature:736126-736218:-1:exon
so has part: feature:735041-735166:-1:exon
so has part: feature:734093-734314:-1:exon
so has part: feature:732311-732403:-1:exon
so has part: feature:731970-732048:-1:exon
so has part: feature:731379-731445:-1:exon
so has part: feature:730899-730990:-1:exon
so has part: feature:730714-730826:-1:exon
so has part: feature:730352-730464:-1:exon
so has part: feature:728839-728939:-1:exon
so has part: feature:723973-724182:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:776824-776954:-1:exon

position:776824:-1
position: 776824
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:765835-765903:-1:exon

position:765835:-1
position: 765835
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:765903:-1
position: 765903
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:765227-765341:-1:exon

position:765227:-1
position: 765227
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:765341:-1
position: 765341
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:759551-759641:-1:exon

position:759551:-1
position: 759551
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:759641:-1
position: 759641
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:752523-752642:-1:exon

position:752523:-1
position: 752523
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:752642:-1
position: 752642
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:751701-751817:-1:exon

position:751701:-1
position: 751701
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:751817:-1
position: 751817
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:750911-751060:-1:exon

position:750911:-1
position: 750911
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:751060:-1
position: 751060
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:748043-748168:-1:exon

position:748043:-1
position: 748043
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:748168:-1
position: 748168
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:747476-747590:-1:exon

position:747476:-1
position: 747476
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:747590:-1
position: 747590
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:746998-747117:-1:exon

position:746998:-1
position: 746998
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:747117:-1
position: 747117
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:744971-745162:-1:exon

position:744971:-1
position: 744971
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:745162:-1
position: 745162
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:742757-742948:-1:exon

position:742757:-1
position: 742757
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:742948:-1
position: 742948
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:742366-742537:-1:exon

position:742366:-1
position: 742366
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:742537:-1
position: 742537
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:738797-738885:-1:exon

position:738797:-1
position: 738797
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:738885:-1
position: 738885
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:738112-738200:-1:exon

position:738112:-1
position: 738112
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:738200:-1
position: 738200
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:737819-737885:-1:exon

position:737819:-1
position: 737819
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:737885:-1
position: 737885
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:737096-737211:-1:exon

position:737096:-1
position: 737096
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:737211:-1
position: 737211
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:736930-736999:-1:exon

position:736930:-1
position: 736930
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:736999:-1
position: 736999
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:736541-736633:-1:exon

position:736541:-1
position: 736541
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:736633:-1
position: 736633
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:736126-736218:-1:exon

position:736126:-1
position: 736126
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:736218:-1
position: 736218
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:735041-735166:-1:exon

position:735041:-1
position: 735041
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:735166:-1
position: 735166
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 22
SIO_000628: feature:734093-734314:-1:exon

position:734093:-1
position: 734093
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:734314:-1
position: 734314
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 23
SIO_000628: feature:732311-732403:-1:exon

position:732311:-1
position: 732311
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:732403:-1
position: 732403
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 24
SIO_000628: feature:731970-732048:-1:exon

position:731970:-1
position: 731970
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:732048:-1
position: 732048
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 25
SIO_000628: feature:731379-731445:-1:exon

position:731379:-1
position: 731379
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:731445:-1
position: 731445
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 26
SIO_000628: feature:730899-730990:-1:exon

position:730899:-1
position: 730899
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:730990:-1
position: 730990
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 27
SIO_000628: feature:730714-730826:-1:exon

position:730714:-1
position: 730714
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:730826:-1
position: 730826
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 28
SIO_000628: feature:730352-730464:-1:exon

position:730352:-1
position: 730352
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:730464:-1
position: 730464
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 29
SIO_000628: feature:728839-728939:-1:exon

position:728839:-1
position: 728839
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:728939:-1
position: 728939
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 30
SIO_000628: feature:723973-724182:-1:exon

position:724182:-1
position: 724182
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

MCF2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 87175
gene: MCF2
exception: unclassified translation discrepancy
note: The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: deleted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: LOW QUALITY PROTEIN: proto-oncogene DBL
translation: MALAPAPAPGGPPPGSTSAGDMERYYRLLRAAALLEAAAETAVPICAKDISDDLMKEFAFLSGGRGKDKAWIITLPDNAGFNQVPEESVARVLTYLTSVPSQHESDTKFILILDRRLDTWTSVKTTLQKIAASFPGNLHLVMVLRPTGFFQRTFTDIGFRFSQEDFLLKLPVVMLSSVSDLLTYIEEQQLTPELGGTLEYCHSEWVIFRTAIESFALTVKDIAQMLQCFGTELAEAELPEDMFCIERLLAVRTERYRQLKEEITAVTKEGKLLLSDFEEPDSGECSQEQQQERPGDWETVNRLLGQLREMETAFDGFWEKHQLKMEQYLQLWKFEQSFQEVKSAIEFLMGQQAELPDTGDSVPQVKQRLKELEHLDGLAQELIGKAQVVILHGHQLAANHHYALNLICQQCNELRHHCDLLAEHGKRKQLRLQRTLELHTRLQQALQCCDEGAYLLANQQMDKCQSKEGAQKALQDIERFLESSSSYLNYDPQALQADFESVLTPELKGQLQAVQGKLDSVRSMFESRQCCFRRLLDKHVRPVQLVAPRPETPPRAKSPLFSPKHGVDFNSSLKFSFDLSLPGKKTSRKTPSSRKIEVMHDYQEKRNSLQYFISDSEDSLDVLKGHVINELIETERVYVEELFTVLMGYRAEMDNPAMLILLPPVLRNRKDVLFGNMPEIYDFHNKIFLHSLESCLGAPERVGCCFLDRREDFQMYEKYCQNKPRSESLWRQCSESSFFQECQRKLEHKLGLDSYLLKPVQRLTKYQLLLKELLKYSTSCDGVQELQEALVAMLDLLKSVNDSMHQISITGYDGDLSELGKVLMQGSFSVWAGHRKGPTKMKDLARFKPMQRHLFLYEKALVFCKKREEHGDGYDKTSSYSFKHFLKMNAVGITENVKGDHRKFEIWYSGREEVYVVQAQTVDLKMAWLNEIRKILFKQQELIKAGEKQQPGSCSEQLPLSSQLGDRKQQRASISSEENDSERTSPVLLSPQSKPHRGWPGMSQSLEICEGLEEWTGQQELSNCSDTEEEEGTQLSPGKYKALADCKRRGSEDLLVKNGDEIQLLHEDGEGQWLVKNLNRRKEGWIPVHSLQIVVGDCRFRNAKVADAALCNTRKFSSP
SIO_010081: MCF2
subclass of: SO_0000673
so part of: MCF2
location: complement(join(724142..724182,728839..728939,730352..730464,730714..730826,730899..730990,731379..731445,731970..732048,732311..732403,734093..734314,735041..735166,736126..736218,736541..736633,736930..736999,737096..737211,737819..737885,738112..738200,738797..738885,742366..742537,742757..742948,744971..745162,746998..747117,747476..747590,748043..748168,750911..751060,751701..751817,752523..752642,759551..759641,765227..765341,765835..765903,776824..776941))
location: region:724142-776941:-1
so has part: feature:776824-776941:-1:exon
so has part: feature:765835-765903:-1:exon
so has part: feature:765227-765341:-1:exon
so has part: feature:759551-759641:-1:exon
so has part: feature:752523-752642:-1:exon
so has part: feature:751701-751817:-1:exon
so has part: feature:750911-751060:-1:exon
so has part: feature:748043-748168:-1:exon
so has part: feature:747476-747590:-1:exon
so has part: feature:746998-747117:-1:exon
so has part: feature:744971-745162:-1:exon
so has part: feature:742757-742948:-1:exon
so has part: feature:742366-742537:-1:exon
so has part: feature:738797-738885:-1:exon
so has part: feature:738112-738200:-1:exon
so has part: feature:737819-737885:-1:exon
so has part: feature:737096-737211:-1:exon
so has part: feature:736930-736999:-1:exon
so has part: feature:736541-736633:-1:exon
so has part: feature:736126-736218:-1:exon
so has part: feature:735041-735166:-1:exon
so has part: feature:734093-734314:-1:exon
so has part: feature:732311-732403:-1:exon
so has part: feature:731970-732048:-1:exon
so has part: feature:731379-731445:-1:exon
so has part: feature:730899-730990:-1:exon
so has part: feature:730714-730826:-1:exon
so has part: feature:730352-730464:-1:exon
so has part: feature:728839-728939:-1:exon
so has part: feature:724142-724182:-1:exon

XP_030823327.1
type: Protein
SIO_000068: ncbiprotein

position:724142:-1
position: 724142
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:776941:-1
position: 776941
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:776824-776941:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:765835-765903:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:765227-765341:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:759551-759641:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:752523-752642:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:751701-751817:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:750911-751060:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:748043-748168:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:747476-747590:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:746998-747117:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:744971-745162:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:742757-742948:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:742366-742537:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:738797-738885:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:738112-738200:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:737819-737885:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:737096-737211:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:736930-736999:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:736541-736633:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:736126-736218:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:735041-735166:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:734093-734314:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:732311-732403:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:731970-732048:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:731379-731445:-1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:730899-730990:-1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:730714-730826:-1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:730352-730464:-1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:728839-728939:-1:exon

urn:…
SIO_000300: 30
SIO_000628: feature:724142-724182:-1:exon

ATP11C
type: Gene
subclass of: SO_0000704
RO_0002162: 87175
gene: ATP11C
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(781684..834959)
location: region:781684-834959:-1
so has part: feature:781684-834959:-1:exon
subclass of: SO_0000010

115914711
type: Gene
SIO_000068: ncbigene

position:781684:-1
position: 781684
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:834959:-1
position: 834959
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:781684-834959:-1:exon

ATP11C
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 87175
gene: ATP11C
product: ATPase phospholipid transporting 11C, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 8 ESTs, 4 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_030967393.1
SIO_010081: ATP11C
subclass of: SO_0000673
so part of: ATP11C
location: complement(join(781684..784987,788704..788857,790035..790138,790921..790986,792875..793010,795283..795410,796428..796487,796858..797003,798262..798364,799018..799192,799509..799772,800305..800486,800996..801099,801732..801805,802662..802733,803608..803765,803860..804021,804861..805058,805852..806002,806374..806455,806994..807058,807813..807863,808491..808594,810881..811009,811594..811701,812649..812729,815844..815933,817631..817750,834789..834959))
location: region:781684-834959:-1
so has part: feature:834789-834959:-1:exon
so has part: feature:817631-817750:-1:exon
so has part: feature:815844-815933:-1:exon
so has part: feature:812649-812729:-1:exon
so has part: feature:811594-811701:-1:exon
so has part: feature:810881-811009:-1:exon
so has part: feature:808491-808594:-1:exon
so has part: feature:807813-807863:-1:exon
so has part: feature:806994-807058:-1:exon
so has part: feature:806374-806455:-1:exon
so has part: feature:805852-806002:-1:exon
so has part: feature:804861-805058:-1:exon
so has part: feature:803860-804021:-1:exon
so has part: feature:803608-803765:-1:exon
so has part: feature:802662-802733:-1:exon
so has part: feature:801732-801805:-1:exon
so has part: feature:800996-801099:-1:exon
so has part: feature:800305-800486:-1:exon
so has part: feature:799509-799772:-1:exon
so has part: feature:799018-799192:-1:exon
so has part: feature:798262-798364:-1:exon
so has part: feature:796858-797003:-1:exon
so has part: feature:796428-796487:-1:exon
so has part: feature:795283-795410:-1:exon
so has part: feature:792875-793010:-1:exon
so has part: feature:790921-790986:-1:exon
so has part: feature:790035-790138:-1:exon
so has part: feature:788704-788857:-1:exon
so has part: feature:781684-784987:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:834789-834959:-1:exon

position:834789:-1
position: 834789
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:817631-817750:-1:exon

position:817631:-1
position: 817631
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:817750:-1
position: 817750
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
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ATP11C
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 87175
gene: ATP11C
product: ATPase phospholipid transporting 11C, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 10 ESTs, 2 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_030967394.1
SIO_010081: ATP11C
subclass of: SO_0000673
so part of: ATP11C
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location: region:781684-834959:-1
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SIO_000300: 29
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urn:…
SIO_000300: 30
SIO_000628: feature:781684-784987:-1:exon

ATP11C
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 87175
gene: ATP11C
product: ATPase phospholipid transporting 11C, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 7 ESTs, 2 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_030967391.1
SIO_010081: ATP11C
subclass of: SO_0000673
so part of: ATP11C
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location: region:781684-834959:-1
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urn:…
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urn:…
SIO_000300: 29
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position:787032:-1
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position:787097:-1
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urn:…
SIO_000300: 30
SIO_000628: feature:781684-784987:-1:exon

ATP11C
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 87175
gene: ATP11C
product: ATPase phospholipid transporting 11C, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 ESTs, 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_030967392.1
SIO_010081: ATP11C
subclass of: SO_0000673
so part of: ATP11C
location: complement(join(784855..784987,786108..786203,787032..787097,788704..788857,790035..790138,790921..790986,792875..793010,795283..795410,796428..796487,796858..797003,798262..798364,799018..799192,799509..799772,800305..800486,800996..801099,801732..801805,802662..802733,803608..803765,803860..804021,804861..805058,805852..806002,806374..806455,806994..807058,807813..807863,808491..808594,810881..811009,811594..811701,812649..812729,815844..815933,817631..817750,834789..834959))
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position:784855:-1
position: 784855
reference: sequence
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urn:…
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SIO_000628: feature:817631-817750:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:815844-815933:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:812649-812729:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:811594-811701:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:810881-811009:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:808491-808594:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:807813-807863:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:806994-807058:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:806374-806455:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:805852-806002:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:804861-805058:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:803860-804021:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:803608-803765:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:802662-802733:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:801732-801805:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:800996-801099:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:800305-800486:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:799509-799772:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:799018-799192:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:798262-798364:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:796858-797003:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:796428-796487:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:795283-795410:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:792875-793010:-1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:790921-790986:-1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:790035-790138:-1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:788704-788857:-1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:787032-787097:-1:exon

urn:…
SIO_000300: 30
SIO_000628: feature:786108-786203:-1:exon

urn:…
SIO_000300: 31
SIO_000628: feature:784855-784987:-1:exon

ATP11C
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 87175
gene: ATP11C
product: ATPase phospholipid transporting 11C, transcript variant X5
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 ESTs, 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_030967395.1
SIO_010081: ATP11C
subclass of: SO_0000673
so part of: ATP11C
location: complement(join(784859..784987,787032..787122,788704..788857,790035..790138,790921..790986,792875..793010,795283..795410,796428..796487,796858..797003,798262..798364,799018..799192,799509..799772,800305..800486,800996..801099,801732..801805,802662..802733,803608..803765,803860..804021,804861..805058,805852..806002,806374..806455,806994..807058,807813..807863,808491..808594,810881..811009,811594..811701,812649..812729,815844..815933,817631..817750,834789..834959))
location: region:784859-834959:-1
so has part: feature:834789-834959:-1:exon
so has part: feature:817631-817750:-1:exon
so has part: feature:815844-815933:-1:exon
so has part: feature:812649-812729:-1:exon
so has part: feature:811594-811701:-1:exon
so has part: feature:810881-811009:-1:exon
so has part: feature:808491-808594:-1:exon
so has part: feature:807813-807863:-1:exon
so has part: feature:806994-807058:-1:exon
so has part: feature:806374-806455:-1:exon
so has part: feature:805852-806002:-1:exon
so has part: feature:804861-805058:-1:exon
so has part: feature:803860-804021:-1:exon
so has part: feature:803608-803765:-1:exon
so has part: feature:802662-802733:-1:exon
so has part: feature:801732-801805:-1:exon
so has part: feature:800996-801099:-1:exon
so has part: feature:800305-800486:-1:exon
so has part: feature:799509-799772:-1:exon
so has part: feature:799018-799192:-1:exon
so has part: feature:798262-798364:-1:exon
so has part: feature:796858-797003:-1:exon
so has part: feature:796428-796487:-1:exon
so has part: feature:795283-795410:-1:exon
so has part: feature:792875-793010:-1:exon
so has part: feature:790921-790986:-1:exon
so has part: feature:790035-790138:-1:exon
so has part: feature:788704-788857:-1:exon
so has part: feature:787032-787122:-1:exon
so has part: feature:784859-784987:-1:exon

position:784859:-1
position: 784859
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:834789-834959:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:817631-817750:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:815844-815933:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:812649-812729:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:811594-811701:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:810881-811009:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:808491-808594:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:807813-807863:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:806994-807058:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:806374-806455:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:805852-806002:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:804861-805058:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:803860-804021:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:803608-803765:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:802662-802733:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:801732-801805:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:800996-801099:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:800305-800486:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:799509-799772:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:799018-799192:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:798262-798364:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:796858-797003:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:796428-796487:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:795283-795410:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:792875-793010:-1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:790921-790986:-1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:790035-790138:-1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:788704-788857:-1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:787032-787122:-1:exon

position:787122:-1
position: 787122
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 30
SIO_000628: feature:784859-784987:-1:exon

ATP11C
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 87175
gene: ATP11C
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: phospholipid-transporting ATPase IG isoform X3
translation: MLRRSLSRLCAGEEKRVGTRTVLVGHRPVADTEAYVAQKFCDNRIVSSKYTLWNFLPKNLFEQFRRIANFYFLIIFLVQVIVDTPTSPVTSGLPLFFVITVTAIKQGYEDWLRHRADNEVNKSNVFVVENAKQVRKESEKIKVGDIVEVKADETFPCDLIFLASSSTDGTCYVTTASLDGESNFKTHYAVRDTTVLCTDEAIDTLTATIECEQPQPDLYKFVGRIIIYGSNQDPVARSLGPENLLLKGATLKNTKKIYGVAVYTGMETKMALNYQGKSQKRSAVEKSINAFLIVYLCILLGKATVCTTLKYVWQSNPFNDEPWYNEKTKKERDTFKVLRMFTDFLSFMVLFNFIIPVSMYVTVEMQKFLGSFFISWDKEMYDEEIQEGALVNTSDLNEELGQVEYVFTDKTGTLTENSMEFIECCIDGHKYKDCMAEVDGFSQPDGPLKYYGKAEKSREELFLRALCLCHTVQIKEADQVDGLVAHPERKCTYISSSPDEIALVKGAEKYGFTFLGLENNFMKIRNQKNETEMYQLLHVLNFDPVRRRMSVIVRTSTGKLLLFCKGADSSIFPRVQQEEIQQTKVHVDRNAMDGYRTLCVAFKELTEKEYDKIDRQLNEAKMALQDREEKMAKVFDDTEADMHLIGATAVEDRLQEQLAETIEALHAAGMKVWVLTGDKMETAKSTCYACRLFQTSTELLELTARTVGESDRKEDRLHELLLEYHKKLIQDLPKTRGGLKRSWTLSQEYGLIIDGSTLSLILNPSQDCGSSNYKSIFLQICLKCTAVLCCRMAPLQKAQIVRMVKNTKGSPITLSIGDGANDVSMILEAHVGIGIKGKEGRQASRNSDYAVPKFKHLRKLLLAHGHLYYVRIAHLVQYFFYKNLCFILPQFLYQFFCGFSQQPLYDAAYLTMYNICFTSLPILAYSLLEQHISIDTLTSDPQLYMKVSDNAMLQWRPFLYWTFLGAFEGLVFFFGVYFLFQNSSLEDNGKVFGNWTFGTIVFTVLVFTVTLKLALDTRFWTWMNHFVIWGSLAFYVFFSFFWGGVIWPFLKQQRMYFVFAHMLTSVSTWLAIILLIFISLFPEILLIVLKNIKEKNHQAGPFDLPVLVSYKRIENGYVKAEDAVTHLAERYPLRIP
SIO_010081: ATP11C
subclass of: SO_0000673
so part of: ATP11C
location: complement(join(784871..784987,788704..788857,790035..790138,790921..790986,792875..793010,795283..795410,796428..796487,796858..797003,798262..798364,799018..799192,799509..799772,800305..800486,800996..801099,801732..801805,802662..802733,803608..803765,803860..804021,804861..805058,805852..806002,806374..806455,806994..807058,807813..807863,808491..808594,810881..811009,811594..811701,812649..812729,815844..815933,817631..817750,834789..834815))
location: region:784871-834815:-1
so has part: feature:834789-834815:-1:exon
so has part: feature:817631-817750:-1:exon
so has part: feature:815844-815933:-1:exon
so has part: feature:812649-812729:-1:exon
so has part: feature:811594-811701:-1:exon
so has part: feature:810881-811009:-1:exon
so has part: feature:808491-808594:-1:exon
so has part: feature:807813-807863:-1:exon
so has part: feature:806994-807058:-1:exon
so has part: feature:806374-806455:-1:exon
so has part: feature:805852-806002:-1:exon
so has part: feature:804861-805058:-1:exon
so has part: feature:803860-804021:-1:exon
so has part: feature:803608-803765:-1:exon
so has part: feature:802662-802733:-1:exon
so has part: feature:801732-801805:-1:exon
so has part: feature:800996-801099:-1:exon
so has part: feature:800305-800486:-1:exon
so has part: feature:799509-799772:-1:exon
so has part: feature:799018-799192:-1:exon
so has part: feature:798262-798364:-1:exon
so has part: feature:796858-797003:-1:exon
so has part: feature:796428-796487:-1:exon
so has part: feature:795283-795410:-1:exon
so has part: feature:792875-793010:-1:exon
so has part: feature:790921-790986:-1:exon
so has part: feature:790035-790138:-1:exon
so has part: feature:788704-788857:-1:exon
so has part: feature:784871-784987:-1:exon

XP_030823253.1
type: Protein
SIO_000068: ncbiprotein

position:784871:-1
position: 784871
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:834815:-1
position: 834815
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:834789-834815:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:817631-817750:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:815844-815933:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:812649-812729:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:811594-811701:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:810881-811009:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:808491-808594:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:807813-807863:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:806994-807058:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:806374-806455:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:805852-806002:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:804861-805058:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:803860-804021:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:803608-803765:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:802662-802733:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:801732-801805:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:800996-801099:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:800305-800486:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:799509-799772:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:799018-799192:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:798262-798364:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:796858-797003:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:796428-796487:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:795283-795410:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:792875-793010:-1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:790921-790986:-1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:790035-790138:-1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:788704-788857:-1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:784871-784987:-1:exon

ATP11C
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 87175
gene: ATP11C
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: phospholipid-transporting ATPase IG isoform X1
translation: MLRRSLSRLCAGEEKRVGTRTVLVGHRPVADTEAYVAQKFCDNRIVSSKYTLWNFLPKNLFEQFRRIANFYFLIIFLVQVIVDTPTSPVTSGLPLFFVITVTAIKQGYEDWLRHRADNEVNKSNVFVVENAKQVRKESEKIKVGDIVEVKADETFPCDLIFLASSSTDGTCYVTTASLDGESNFKTHYAVRDTTVLCTDEAIDTLTATIECEQPQPDLYKFVGRIIIYGSNQDPVARSLGPENLLLKGATLKNTKKIYGVAVYTGMETKMALNYQGKSQKRSAVEKSINAFLIVYLCILLGKATVCTTLKYVWQSNPFNDEPWYNEKTKKERDTFKVLRMFTDFLSFMVLFNFIIPVSMYVTVEMQKFLGSFFISWDKEMYDEEIQEGALVNTSDLNEELGQVEYVFTDKTGTLTENSMEFIECCIDGHKYKDCMAEVDGFSQPDGPLKYYGKAEKSREELFLRALCLCHTVQIKEADQVDGLVAHPERKCTYISSSPDEIALVKGAEKYGFTFLGLENNFMKIRNQKNETEMYQLLHVLNFDPVRRRMSVIVRTSTGKLLLFCKGADSSIFPRVQQEEIQQTKVHVDRNAMDGYRTLCVAFKELTEKEYDKIDRQLNEAKMALQDREEKMAKVFDDTEADMHLIGATAVEDRLQEQLAETIEALHAAGMKVWVLTGDKMETAKSTCYACRLFQTSTELLELTARTVGESDRKEDRLHELLLEYHKKLIQDLPKTRGGLKRSWTLSQEYGLIIDGSTLSLILNPSQDCGSSNYKSIFLQICLKCTAVLCCRMAPLQKAQIVRMVKNTKGSPITLSIGDGANDVSMILEAHVGIGIKGKEGRQASRNSDYAVPKFKHLRKLLLAHGHLYYVRIAHLVQYFFYKNLCFILPQFLYQFFCGFSQQPLYDAAYLTMYNICFTSLPILAYSLLEQHISIDTLTSDPQLYMKVSDNAMLQWRPFLYWTFLGAFEGLVFFFGVYFLFQNSSLEDNGKVFGNWTFGTIVFTVLVFTVTLKLALDTRFWTWMNHFVIWGSLAFYVFFSFFWGGVIWPFLKQQRMYFVFAHMLTSVSTWLAIILLIFISLFPEILLIVLKNIKEKNHQEHPLSSCFLKLPAITAFLGVNKAGPFDLPVLVSYKRIENGYVKAEDAVTHLAERYPLRIP
SIO_010081: ATP11C
subclass of: SO_0000673
so part of: ATP11C
location: complement(join(784871..784987,787032..787097,788704..788857,790035..790138,790921..790986,792875..793010,795283..795410,796428..796487,796858..797003,798262..798364,799018..799192,799509..799772,800305..800486,800996..801099,801732..801805,802662..802733,803608..803765,803860..804021,804861..805058,805852..806002,806374..806455,806994..807058,807813..807863,808491..808594,810881..811009,811594..811701,812649..812729,815844..815933,817631..817750,834789..834815))
location: region:784871-834815:-1
so has part: feature:834789-834815:-1:exon
so has part: feature:817631-817750:-1:exon
so has part: feature:815844-815933:-1:exon
so has part: feature:812649-812729:-1:exon
so has part: feature:811594-811701:-1:exon
so has part: feature:810881-811009:-1:exon
so has part: feature:808491-808594:-1:exon
so has part: feature:807813-807863:-1:exon
so has part: feature:806994-807058:-1:exon
so has part: feature:806374-806455:-1:exon
so has part: feature:805852-806002:-1:exon
so has part: feature:804861-805058:-1:exon
so has part: feature:803860-804021:-1:exon
so has part: feature:803608-803765:-1:exon
so has part: feature:802662-802733:-1:exon
so has part: feature:801732-801805:-1:exon
so has part: feature:800996-801099:-1:exon
so has part: feature:800305-800486:-1:exon
so has part: feature:799509-799772:-1:exon
so has part: feature:799018-799192:-1:exon
so has part: feature:798262-798364:-1:exon
so has part: feature:796858-797003:-1:exon
so has part: feature:796428-796487:-1:exon
so has part: feature:795283-795410:-1:exon
so has part: feature:792875-793010:-1:exon
so has part: feature:790921-790986:-1:exon
so has part: feature:790035-790138:-1:exon
so has part: feature:788704-788857:-1:exon
so has part: feature:787032-787097:-1:exon
so has part: feature:784871-784987:-1:exon

XP_030823251.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:834789-834815:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:817631-817750:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:815844-815933:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:812649-812729:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:811594-811701:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:810881-811009:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:808491-808594:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:807813-807863:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:806994-807058:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:806374-806455:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:805852-806002:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:804861-805058:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:803860-804021:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:803608-803765:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:802662-802733:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:801732-801805:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:800996-801099:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:800305-800486:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:799509-799772:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:799018-799192:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:798262-798364:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:796858-797003:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:796428-796487:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:795283-795410:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:792875-793010:-1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:790921-790986:-1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:790035-790138:-1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:788704-788857:-1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:787032-787097:-1:exon

urn:…
SIO_000300: 30
SIO_000628: feature:784871-784987:-1:exon

ATP11C
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 87175
gene: ATP11C
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: phospholipid-transporting ATPase IG isoform X4
translation: MLRRSLSRLCAGEEKRVGTRTVLVGHRPVADTEAYVAQKFCDNRIVSSKYTLWNFLPKNLFEQFRRIANFYFLIIFLVQVIVDTPTSPVTSGLPLFFVITVTAIKQGYEDWLRHRADNEVNKSNVFVVENAKQVRKESEKIKVGDIVEVKADETFPCDLIFLASSSTDGTCYVTTASLDGESNFKTHYAVRDTTVLCTDEAIDTLTATIECEQPQPDLYKFVGRIIIYGSNQDPVARSLGPENLLLKGATLKNTKKIYGVAVYTGMETKMALNYQGKSQKRSAVEKSINAFLIVYLCILLGKATVCTTLKYVWQSNPFNDEPWYNEKTKKERDTFKVLRMFTDFLSFMVLFNFIIPVSMYVTVEMQKFLGSFFISWDKEMYDEEIQEGALVNTSDLNEELGQVEYVFTDKTGTLTENSMEFIECCIDGHKYKDCMAEVDGFSQPDGPLKYYGKAEKSREELFLRALCLCHTVQIKEADQVDGLVAHPERKCTYISSSPDEIALVKGAEKYGFTFLGLENNFMKIRNQKNETEMYQLLHVLNFDPVRRRMSVIVRTSTGKLLLFCKGADSSIFPRVQQEEIQQTKVHVDRNAMDGYRTLCVAFKELTEKEYDKIDRQLNEAKMALQDREEKMAKVFDDTEADMHLIGATAVEDRLQEQLAETIEALHAAGMKVWVLTGDKMETAKSTCYACRLFQTSTELLELTARTVGESDRKEDRLHELLLEYHKKLIQDLPKTRGGLKRSWTLSQEYGLIIDGSTLSLILNPSQDCGSSNYKSIFLQICLKCTAVLCCRMAPLQKAQIVRMVKNTKGSPITLSIGDGANDVSMILEAHVGIGIKGKEGRQASRNSDYAVPKFKHLRKLLLAHGHLYYVRIAHLVQYFFYKNLCFILPQFLYQFFCGFSQQPLYDAAYLTMYNICFTSLPILAYSLLEQHISIDTLTSDPQLYMKVSDNAMLQWRPFLYWTFLGAFEGLVFFFGVYFLFQNSSLEDNGKVFGNWTFGTIVFTVLVFTVTLKLALDTRFWTWMNHFVIWGSLAFYVFFSFFWGGVIWPFLKQQRMYFVFAHMLTSVSTWLAIILLIFISLFPEILLIVLKNIKEKNHQSSRKAPDSLSARPSVRPLLLRTFSDESNVL
SIO_010081: ATP11C
subclass of: SO_0000673
so part of: ATP11C
location: complement(join(786111..786203,788704..788857,790035..790138,790921..790986,792875..793010,795283..795410,796428..796487,796858..797003,798262..798364,799018..799192,799509..799772,800305..800486,800996..801099,801732..801805,802662..802733,803608..803765,803860..804021,804861..805058,805852..806002,806374..806455,806994..807058,807813..807863,808491..808594,810881..811009,811594..811701,812649..812729,815844..815933,817631..817750,834789..834815))
location: region:786111-834815:-1
so has part: feature:834789-834815:-1:exon
so has part: feature:817631-817750:-1:exon
so has part: feature:815844-815933:-1:exon
so has part: feature:812649-812729:-1:exon
so has part: feature:811594-811701:-1:exon
so has part: feature:810881-811009:-1:exon
so has part: feature:808491-808594:-1:exon
so has part: feature:807813-807863:-1:exon
so has part: feature:806994-807058:-1:exon
so has part: feature:806374-806455:-1:exon
so has part: feature:805852-806002:-1:exon
so has part: feature:804861-805058:-1:exon
so has part: feature:803860-804021:-1:exon
so has part: feature:803608-803765:-1:exon
so has part: feature:802662-802733:-1:exon
so has part: feature:801732-801805:-1:exon
so has part: feature:800996-801099:-1:exon
so has part: feature:800305-800486:-1:exon
so has part: feature:799509-799772:-1:exon
so has part: feature:799018-799192:-1:exon
so has part: feature:798262-798364:-1:exon
so has part: feature:796858-797003:-1:exon
so has part: feature:796428-796487:-1:exon
so has part: feature:795283-795410:-1:exon
so has part: feature:792875-793010:-1:exon
so has part: feature:790921-790986:-1:exon
so has part: feature:790035-790138:-1:exon
so has part: feature:788704-788857:-1:exon
so has part: feature:786111-786203:-1:exon

XP_030823254.1
type: Protein
SIO_000068: ncbiprotein

position:786111:-1
position: 786111
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:834789-834815:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:817631-817750:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:815844-815933:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:812649-812729:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:811594-811701:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:810881-811009:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:808491-808594:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:807813-807863:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:806994-807058:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:806374-806455:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:805852-806002:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:804861-805058:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:803860-804021:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:803608-803765:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:802662-802733:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:801732-801805:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:800996-801099:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:800305-800486:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:799509-799772:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:799018-799192:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:798262-798364:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:796858-797003:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:796428-796487:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:795283-795410:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:792875-793010:-1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:790921-790986:-1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:790035-790138:-1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:788704-788857:-1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:786111-786203:-1:exon

ATP11C
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 87175
gene: ATP11C
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: phospholipid-transporting ATPase IG isoform X2
translation: MLRRSLSRLCAGEEKRVGTRTVLVGHRPVADTEAYVAQKFCDNRIVSSKYTLWNFLPKNLFEQFRRIANFYFLIIFLVQVIVDTPTSPVTSGLPLFFVITVTAIKQGYEDWLRHRADNEVNKSNVFVVENAKQVRKESEKIKVGDIVEVKADETFPCDLIFLASSSTDGTCYVTTASLDGESNFKTHYAVRDTTVLCTDEAIDTLTATIECEQPQPDLYKFVGRIIIYGSNQDPVARSLGPENLLLKGATLKNTKKIYGVAVYTGMETKMALNYQGKSQKRSAVEKSINAFLIVYLCILLGKATVCTTLKYVWQSNPFNDEPWYNEKTKKERDTFKVLRMFTDFLSFMVLFNFIIPVSMYVTVEMQKFLGSFFISWDKEMYDEEIQEGALVNTSDLNEELGQVEYVFTDKTGTLTENSMEFIECCIDGHKYKDCMAEVDGFSQPDGPLKYYGKAEKSREELFLRALCLCHTVQIKEADQVDGLVAHPERKCTYISSSPDEIALVKGAEKYGFTFLGLENNFMKIRNQKNETEMYQLLHVLNFDPVRRRMSVIVRTSTGKLLLFCKGADSSIFPRVQQEEIQQTKVHVDRNAMDGYRTLCVAFKELTEKEYDKIDRQLNEAKMALQDREEKMAKVFDDTEADMHLIGATAVEDRLQEQLAETIEALHAAGMKVWVLTGDKMETAKSTCYACRLFQTSTELLELTARTVGESDRKEDRLHELLLEYHKKLIQDLPKTRGGLKRSWTLSQEYGLIIDGSTLSLILNPSQDCGSSNYKSIFLQICLKCTAVLCCRMAPLQKAQIVRMVKNTKGSPITLSIGDGANDVSMILEAHVGIGIKGKEGRQASRNSDYAVPKFKHLRKLLLAHGHLYYVRIAHLVQYFFYKNLCFILPQFLYQFFCGFSQQPLYDAAYLTMYNICFTSLPILAYSLLEQHISIDTLTSDPQLYMKVSDNAMLQWRPFLYWTFLGAFEGLVFFFGVYFLFQNSSLEDNGKVFGNWTFGTIVFTVLVFTVTLKLALDTRFWTWMNHFVIWGSLAFYVFFSFFWGGVIWPFLKQQRMYFVFAHMLTSVSTWLAIILLIFISLFPEILLIVLKNIKEKNHQEHPLSSCFLKLPAITAFLGVNKSSRKAPDSLSARPSVRPLLLRTFSDESNVL
SIO_010081: ATP11C
subclass of: SO_0000673
so part of: ATP11C
location: complement(join(786111..786203,787032..787097,788704..788857,790035..790138,790921..790986,792875..793010,795283..795410,796428..796487,796858..797003,798262..798364,799018..799192,799509..799772,800305..800486,800996..801099,801732..801805,802662..802733,803608..803765,803860..804021,804861..805058,805852..806002,806374..806455,806994..807058,807813..807863,808491..808594,810881..811009,811594..811701,812649..812729,815844..815933,817631..817750,834789..834815))
location: region:786111-834815:-1
so has part: feature:834789-834815:-1:exon
so has part: feature:817631-817750:-1:exon
so has part: feature:815844-815933:-1:exon
so has part: feature:812649-812729:-1:exon
so has part: feature:811594-811701:-1:exon
so has part: feature:810881-811009:-1:exon
so has part: feature:808491-808594:-1:exon
so has part: feature:807813-807863:-1:exon
so has part: feature:806994-807058:-1:exon
so has part: feature:806374-806455:-1:exon
so has part: feature:805852-806002:-1:exon
so has part: feature:804861-805058:-1:exon
so has part: feature:803860-804021:-1:exon
so has part: feature:803608-803765:-1:exon
so has part: feature:802662-802733:-1:exon
so has part: feature:801732-801805:-1:exon
so has part: feature:800996-801099:-1:exon
so has part: feature:800305-800486:-1:exon
so has part: feature:799509-799772:-1:exon
so has part: feature:799018-799192:-1:exon
so has part: feature:798262-798364:-1:exon
so has part: feature:796858-797003:-1:exon
so has part: feature:796428-796487:-1:exon
so has part: feature:795283-795410:-1:exon
so has part: feature:792875-793010:-1:exon
so has part: feature:790921-790986:-1:exon
so has part: feature:790035-790138:-1:exon
so has part: feature:788704-788857:-1:exon
so has part: feature:787032-787097:-1:exon
so has part: feature:786111-786203:-1:exon

XP_030823252.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:834789-834815:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:817631-817750:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:815844-815933:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:812649-812729:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:811594-811701:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:810881-811009:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:808491-808594:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:807813-807863:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:806994-807058:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:806374-806455:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:805852-806002:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:804861-805058:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:803860-804021:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:803608-803765:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:802662-802733:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:801732-801805:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:800996-801099:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:800305-800486:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:799509-799772:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:799018-799192:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:798262-798364:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:796858-797003:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:796428-796487:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:795283-795410:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:792875-793010:-1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:790921-790986:-1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:790035-790138:-1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:788704-788857:-1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:787032-787097:-1:exon

urn:…
SIO_000300: 30
SIO_000628: feature:786111-786203:-1:exon

ATP11C
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 87175
gene: ATP11C
product: ATPase phospholipid transporting 11C, transcript variant X6
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 ESTs, 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_030967396.1
SIO_010081: ATP11C
subclass of: SO_0000673
so part of: ATP11C
location: complement(join(786124..786203,787032..787122,788704..788857,790035..790138,790921..790986,792875..793010,795283..795410,796428..796487,796858..797003,798262..798364,799018..799192,799509..799772,800305..800486,800996..801099,801732..801805,802662..802733,803608..803765,803860..804021,804861..805058,805852..806002,806374..806455,806994..807058,807813..807863,808491..808594,810881..811009,811594..811701,812649..812729,815844..815933,817631..817750,834789..834959))
location: region:786124-834959:-1
so has part: feature:834789-834959:-1:exon
so has part: feature:817631-817750:-1:exon
so has part: feature:815844-815933:-1:exon
so has part: feature:812649-812729:-1:exon
so has part: feature:811594-811701:-1:exon
so has part: feature:810881-811009:-1:exon
so has part: feature:808491-808594:-1:exon
so has part: feature:807813-807863:-1:exon
so has part: feature:806994-807058:-1:exon
so has part: feature:806374-806455:-1:exon
so has part: feature:805852-806002:-1:exon
so has part: feature:804861-805058:-1:exon
so has part: feature:803860-804021:-1:exon
so has part: feature:803608-803765:-1:exon
so has part: feature:802662-802733:-1:exon
so has part: feature:801732-801805:-1:exon
so has part: feature:800996-801099:-1:exon
so has part: feature:800305-800486:-1:exon
so has part: feature:799509-799772:-1:exon
so has part: feature:799018-799192:-1:exon
so has part: feature:798262-798364:-1:exon
so has part: feature:796858-797003:-1:exon
so has part: feature:796428-796487:-1:exon
so has part: feature:795283-795410:-1:exon
so has part: feature:792875-793010:-1:exon
so has part: feature:790921-790986:-1:exon
so has part: feature:790035-790138:-1:exon
so has part: feature:788704-788857:-1:exon
so has part: feature:787032-787122:-1:exon
so has part: feature:786124-786203:-1:exon

position:786124:-1
position: 786124
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:834789-834959:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:817631-817750:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:815844-815933:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:812649-812729:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:811594-811701:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:810881-811009:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:808491-808594:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:807813-807863:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:806994-807058:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:806374-806455:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:805852-806002:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:804861-805058:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:803860-804021:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:803608-803765:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:802662-802733:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:801732-801805:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:800996-801099:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:800305-800486:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:799509-799772:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:799018-799192:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:798262-798364:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:796858-797003:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:796428-796487:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:795283-795410:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:792875-793010:-1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:790921-790986:-1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:790035-790138:-1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:788704-788857:-1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:787032-787122:-1:exon

urn:…
SIO_000300: 30
SIO_000628: feature:786124-786203:-1:exon

ATP11C
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 87175
gene: ATP11C
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: phospholipid-transporting ATPase IG isoform X5
translation: MLRRSLSRLCAGEEKRVGTRTVLVGHRPVADTEAYVAQKFCDNRIVSSKYTLWNFLPKNLFEQFRRIANFYFLIIFLVQVIVDTPTSPVTSGLPLFFVITVTAIKQGYEDWLRHRADNEVNKSNVFVVENAKQVRKESEKIKVGDIVEVKADETFPCDLIFLASSSTDGTCYVTTASLDGESNFKTHYAVRDTTVLCTDEAIDTLTATIECEQPQPDLYKFVGRIIIYGSNQDPVARSLGPENLLLKGATLKNTKKIYGVAVYTGMETKMALNYQGKSQKRSAVEKSINAFLIVYLCILLGKATVCTTLKYVWQSNPFNDEPWYNEKTKKERDTFKVLRMFTDFLSFMVLFNFIIPVSMYVTVEMQKFLGSFFISWDKEMYDEEIQEGALVNTSDLNEELGQVEYVFTDKTGTLTENSMEFIECCIDGHKYKDCMAEVDGFSQPDGPLKYYGKAEKSREELFLRALCLCHTVQIKEADQVDGLVAHPERKCTYISSSPDEIALVKGAEKYGFTFLGLENNFMKIRNQKNETEMYQLLHVLNFDPVRRRMSVIVRTSTGKLLLFCKGADSSIFPRVQQEEIQQTKVHVDRNAMDGYRTLCVAFKELTEKEYDKIDRQLNEAKMALQDREEKMAKVFDDTEADMHLIGATAVEDRLQEQLAETIEALHAAGMKVWVLTGDKMETAKSTCYACRLFQTSTELLELTARTVGESDRKEDRLHELLLEYHKKLIQDLPKTRGGLKRSWTLSQEYGLIIDGSTLSLILNPSQDCGSSNYKSIFLQICLKCTAVLCCRMAPLQKAQIVRMVKNTKGSPITLSIGDGANDVSMILEAHVGIGIKGKEGRQASRNSDYAVPKFKHLRKLLLAHGHLYYVRIAHLVQYFFYKNLCFILPQFLYQFFCGFSQQPLYDAAYLTMYNICFTSLPILAYSLLEQHISIDTLTSDPQLYMKVSDNAMLQWRPFLYWTFLGAFEGLVFFFGVYFLFQNSSLEDNGKVFGNWTFGTIVFTVLVFTVTLKLALDTRFWTWMNHFVIWGSLAFYVFFSFFWGGVIWPFLKQQRMYFVFAHMLTSVSTWLAIILLIFISLFPEILLIVLKNIKEKNHQVTKRLPSSGTSTIFMLSQTSSNHSFSWSE
SIO_010081: ATP11C
subclass of: SO_0000673
so part of: ATP11C
location: complement(join(787033..787122,788704..788857,790035..790138,790921..790986,792875..793010,795283..795410,796428..796487,796858..797003,798262..798364,799018..799192,799509..799772,800305..800486,800996..801099,801732..801805,802662..802733,803608..803765,803860..804021,804861..805058,805852..806002,806374..806455,806994..807058,807813..807863,808491..808594,810881..811009,811594..811701,812649..812729,815844..815933,817631..817750,834789..834815))
location: region:787033-834815:-1
so has part: feature:834789-834815:-1:exon
so has part: feature:817631-817750:-1:exon
so has part: feature:815844-815933:-1:exon
so has part: feature:812649-812729:-1:exon
so has part: feature:811594-811701:-1:exon
so has part: feature:810881-811009:-1:exon
so has part: feature:808491-808594:-1:exon
so has part: feature:807813-807863:-1:exon
so has part: feature:806994-807058:-1:exon
so has part: feature:806374-806455:-1:exon
so has part: feature:805852-806002:-1:exon
so has part: feature:804861-805058:-1:exon
so has part: feature:803860-804021:-1:exon
so has part: feature:803608-803765:-1:exon
so has part: feature:802662-802733:-1:exon
so has part: feature:801732-801805:-1:exon
so has part: feature:800996-801099:-1:exon
so has part: feature:800305-800486:-1:exon
so has part: feature:799509-799772:-1:exon
so has part: feature:799018-799192:-1:exon
so has part: feature:798262-798364:-1:exon
so has part: feature:796858-797003:-1:exon
so has part: feature:796428-796487:-1:exon
so has part: feature:795283-795410:-1:exon
so has part: feature:792875-793010:-1:exon
so has part: feature:790921-790986:-1:exon
so has part: feature:790035-790138:-1:exon
so has part: feature:788704-788857:-1:exon
so has part: feature:787033-787122:-1:exon

XP_030823255.1
type: Protein
SIO_000068: ncbiprotein

position:787033:-1
position: 787033
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:834789-834815:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:817631-817750:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:815844-815933:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:812649-812729:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:811594-811701:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:810881-811009:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:808491-808594:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:807813-807863:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:806994-807058:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:806374-806455:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:805852-806002:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:804861-805058:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:803860-804021:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:803608-803765:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:802662-802733:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:801732-801805:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:800996-801099:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:800305-800486:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:799509-799772:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:799018-799192:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:798262-798364:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:796858-797003:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:796428-796487:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:795283-795410:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:792875-793010:-1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:790921-790986:-1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:790035-790138:-1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:788704-788857:-1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:787033-787122:-1:exon

ATP11C
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 87175
gene: ATP11C
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: phospholipid-transporting ATPase IG isoform X5
translation: MLRRSLSRLCAGEEKRVGTRTVLVGHRPVADTEAYVAQKFCDNRIVSSKYTLWNFLPKNLFEQFRRIANFYFLIIFLVQVIVDTPTSPVTSGLPLFFVITVTAIKQGYEDWLRHRADNEVNKSNVFVVENAKQVRKESEKIKVGDIVEVKADETFPCDLIFLASSSTDGTCYVTTASLDGESNFKTHYAVRDTTVLCTDEAIDTLTATIECEQPQPDLYKFVGRIIIYGSNQDPVARSLGPENLLLKGATLKNTKKIYGVAVYTGMETKMALNYQGKSQKRSAVEKSINAFLIVYLCILLGKATVCTTLKYVWQSNPFNDEPWYNEKTKKERDTFKVLRMFTDFLSFMVLFNFIIPVSMYVTVEMQKFLGSFFISWDKEMYDEEIQEGALVNTSDLNEELGQVEYVFTDKTGTLTENSMEFIECCIDGHKYKDCMAEVDGFSQPDGPLKYYGKAEKSREELFLRALCLCHTVQIKEADQVDGLVAHPERKCTYISSSPDEIALVKGAEKYGFTFLGLENNFMKIRNQKNETEMYQLLHVLNFDPVRRRMSVIVRTSTGKLLLFCKGADSSIFPRVQQEEIQQTKVHVDRNAMDGYRTLCVAFKELTEKEYDKIDRQLNEAKMALQDREEKMAKVFDDTEADMHLIGATAVEDRLQEQLAETIEALHAAGMKVWVLTGDKMETAKSTCYACRLFQTSTELLELTARTVGESDRKEDRLHELLLEYHKKLIQDLPKTRGGLKRSWTLSQEYGLIIDGSTLSLILNPSQDCGSSNYKSIFLQICLKCTAVLCCRMAPLQKAQIVRMVKNTKGSPITLSIGDGANDVSMILEAHVGIGIKGKEGRQASRNSDYAVPKFKHLRKLLLAHGHLYYVRIAHLVQYFFYKNLCFILPQFLYQFFCGFSQQPLYDAAYLTMYNICFTSLPILAYSLLEQHISIDTLTSDPQLYMKVSDNAMLQWRPFLYWTFLGAFEGLVFFFGVYFLFQNSSLEDNGKVFGNWTFGTIVFTVLVFTVTLKLALDTRFWTWMNHFVIWGSLAFYVFFSFFWGGVIWPFLKQQRMYFVFAHMLTSVSTWLAIILLIFISLFPEILLIVLKNIKEKNHQVTKRLPSSGTSTIFMLSQTSSNHSFSWSE
SIO_010081: ATP11C
subclass of: SO_0000673
so part of: ATP11C
location: complement(join(787033..787122,788704..788857,790035..790138,790921..790986,792875..793010,795283..795410,796428..796487,796858..797003,798262..798364,799018..799192,799509..799772,800305..800486,800996..801099,801732..801805,802662..802733,803608..803765,803860..804021,804861..805058,805852..806002,806374..806455,806994..807058,807813..807863,808491..808594,810881..811009,811594..811701,812649..812729,815844..815933,817631..817750,834789..834815))
location: region:787033-834815:-1
so has part: feature:834789-834815:-1:exon
so has part: feature:817631-817750:-1:exon
so has part: feature:815844-815933:-1:exon
so has part: feature:812649-812729:-1:exon
so has part: feature:811594-811701:-1:exon
so has part: feature:810881-811009:-1:exon
so has part: feature:808491-808594:-1:exon
so has part: feature:807813-807863:-1:exon
so has part: feature:806994-807058:-1:exon
so has part: feature:806374-806455:-1:exon
so has part: feature:805852-806002:-1:exon
so has part: feature:804861-805058:-1:exon
so has part: feature:803860-804021:-1:exon
so has part: feature:803608-803765:-1:exon
so has part: feature:802662-802733:-1:exon
so has part: feature:801732-801805:-1:exon
so has part: feature:800996-801099:-1:exon
so has part: feature:800305-800486:-1:exon
so has part: feature:799509-799772:-1:exon
so has part: feature:799018-799192:-1:exon
so has part: feature:798262-798364:-1:exon
so has part: feature:796858-797003:-1:exon
so has part: feature:796428-796487:-1:exon
so has part: feature:795283-795410:-1:exon
so has part: feature:792875-793010:-1:exon
so has part: feature:790921-790986:-1:exon
so has part: feature:790035-790138:-1:exon
so has part: feature:788704-788857:-1:exon
so has part: feature:787033-787122:-1:exon

XP_030823256.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:834789-834815:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:817631-817750:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:815844-815933:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:812649-812729:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:811594-811701:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:810881-811009:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:808491-808594:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:807813-807863:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:806994-807058:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:806374-806455:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:805852-806002:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:804861-805058:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:803860-804021:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:803608-803765:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:802662-802733:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:801732-801805:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:800996-801099:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:800305-800486:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:799509-799772:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:799018-799192:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:798262-798364:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:796858-797003:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:796428-796487:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:795283-795410:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:792875-793010:-1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:790921-790986:-1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:790035-790138:-1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:788704-788857:-1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:787033-787122:-1:exon

ARL13A
type: Gene
subclass of: SO_0000704
RO_0002162: 87175
gene: ARL13A
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(843761..847425)
location: region:843761-847425:-1
so has part: feature:843761-847425:-1:exon
subclass of: SO_0000010

115914975
type: Gene
SIO_000068: ncbigene

position:843761:-1
position: 843761
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:847425:-1
position: 847425
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:843761-847425:-1:exon

ARL13A
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 87175
gene: ARL13A
product: ADP ribosylation factor like GTPase 13A
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein
transcript id: XM_030967883.1
SIO_010081: ARL13A
subclass of: SO_0000673
so part of: ARL13A
location: complement(join(843761..843837,844150..844251,844560..844752,845000..845164,845457..845562,845835..846084,846292..846362,847367..847425))
location: region:843761-847425:-1
so has part: feature:847367-847425:-1:exon
so has part: feature:846292-846362:-1:exon
so has part: feature:845835-846084:-1:exon
so has part: feature:845457-845562:-1:exon
so has part: feature:845000-845164:-1:exon
so has part: feature:844560-844752:-1:exon
so has part: feature:844150-844251:-1:exon
so has part: feature:843761-843837:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:847367-847425:-1:exon

position:847367:-1
position: 847367
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:846292-846362:-1:exon

position:846292:-1
position: 846292
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:846362:-1
position: 846362
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:845835-846084:-1:exon

position:845835:-1
position: 845835
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:846084:-1
position: 846084
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:845457-845562:-1:exon

position:845457:-1
position: 845457
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:845562:-1
position: 845562
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:845000-845164:-1:exon

position:845000:-1
position: 845000
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:845164:-1
position: 845164
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:844560-844752:-1:exon

position:844560:-1
position: 844560
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:844752:-1
position: 844752
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:844150-844251:-1:exon

position:844150:-1
position: 844150
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:844251:-1
position: 844251
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:843761-843837:-1:exon

position:843837:-1
position: 843837
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

ARL13A
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 87175
gene: ARL13A
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: ADP-ribosylation factor-like protein 13A
translation: MFHLFSHCWSWLQAIQEPVRKVTLLVMGLDNAGKTSVIADIERALAGEVLPGAQPGQSRLRVDRFEVTLRDLPGAQRSRSAWRSHYSEAHGLLFVLDSADLARVEEARKVLSRVLSHPDVSGKPLLLLANKQDAPAALLPCELIERLCLERLVNENRSPCRIEPCVAKRVPPAGPARSTLQGLRWLLPRRRRRPGPAGRRPGACRPSGRPRPPARPQEESAKGPRRRKRKVKVKVKKKGLGQPGPAEEPEGPGVGAAGGLLLPNRVGQEEPTASGTAILHPAQGMKKKKKKKLKNKIKSREPSLEQQREEVSSTFDLYRRAMLALKMRQEQRKQPSAIAP
SIO_010081: ARL13A
subclass of: SO_0000673
so part of: ARL13A
location: complement(join(843761..843837,844150..844251,844560..844752,845000..845164,845457..845562,845835..846084,846292..846362,847367..847425))
location: region:843761-847425:-1
so has part: feature:847367-847425:-1:exon
so has part: feature:846292-846362:-1:exon
so has part: feature:845835-846084:-1:exon
so has part: feature:845457-845562:-1:exon
so has part: feature:845000-845164:-1:exon
so has part: feature:844560-844752:-1:exon
so has part: feature:844150-844251:-1:exon
so has part: feature:843761-843837:-1:exon

XP_030823743.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:847367-847425:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:846292-846362:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:845835-846084:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:845457-845562:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:845000-845164:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:844560-844752:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:844150-844251:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:843761-843837:-1:exon

XKRX
type: Gene
subclass of: SO_0000704
RO_0002162: 87175
gene: XKRX
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 855753..861231
location: region:855753-861231:1
so has part: feature:855753-861231:1:exon
subclass of: SO_0000010

115914795
type: Gene
SIO_000068: ncbigene

position:855753:1
position: 855753
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:861231:1
position: 861231
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:855753-861231:1:exon

XKRX
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 87175
gene: XKRX
product: XK related X-linked
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 ESTs, 12 Proteins, and 98% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
transcript id: XM_030967555.1
SIO_010081: XKRX
subclass of: SO_0000673
so part of: XKRX
location: join(855753..856060,858364..858623,860185..861231)
location: region:855753-861231:1
so has part: feature:855753-856060:1:exon
so has part: feature:858364-858623:1:exon
so has part: feature:860185-861231:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:855753-856060:1:exon

position:856060:1
position: 856060
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:858364-858623:1:exon

position:858364:1
position: 858364
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:858623:1
position: 858623
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:860185-861231:1:exon

position:860185:1
position: 860185
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

XKRX
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 87175
gene: XKRX
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: XK-related protein 2
translation: MDAPSGGCPPAAAPSRAKLPLGIVFSTALFCGEGAAAAVLCLSYGHSDDRFWLALTVFFVLCPSVLVQLTLIFVHRDLSRDRPLVLLMHLLQLGPIIRCVEALVVYCWSGREEEPYVTITRKRRLRHGYELELEQEVGHSERRLATHRNAFKRMAVIQAFLGSTPQLTLQLYISVLEKYVPAARAVLMAICLVSVTYGALVCNILAIQVKYDDYKVQLRPLAFLCIVLWRSLEISTRIAVLVLFSTVFKHWIIPIALANLLVVFFLPWVQFWRSGSRLPDNIEKNFSRLGTVVVLCAFTLLYSSINMFCWSAVQLKLADRDLIDKSQNWGRLAVYYVARLAENTALVILWYFFKTDVYENVCTALLVLQLLLGYCLGIYFMLLFFQYLHPCRQLFRHNVADFLHCVCCRRRPAGTPLCLEAPLEPGVRHSIV
SIO_010081: XKRX
subclass of: SO_0000673
so part of: XKRX
location: join(855768..856060,858364..858623,860185..860930)
location: region:855768-860930:1
so has part: feature:855768-856060:1:exon
so has part: feature:858364-858623:1:exon
so has part: feature:860185-860930:1:exon

XP_030823415.1
type: Protein
SIO_000068: ncbiprotein

position:855768:1
position: 855768
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:860930:1
position: 860930
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:855768-856060:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:858364-858623:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:860185-860930:1:exon

NOX1
type: Gene
subclass of: SO_0000704
RO_0002162: 87175
gene: NOX1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 861359..867179
location: region:861359-867179:1
so has part: feature:861359-867179:1:exon
subclass of: SO_0000010

115914794
type: Gene
SIO_000068: ncbigene

position:861359:1
position: 861359
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:867179:1
position: 867179
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:861359-867179:1:exon

NOX1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 87175
gene: NOX1
product: NADPH oxidase 1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_030967554.1
SIO_010081: NOX1
subclass of: SO_0000673
so part of: NOX1
location: join(861359..861450,863649..863744,864132..864242,864363..864447,864523..864665,864743..864924,865123..865261,865349..865441,865601..865827,865906..866068,866155..866301,866493..866617,866795..867179)
location: region:861359-867179:1
so has part: feature:861359-861450:1:exon
so has part: feature:863649-863744:1:exon
so has part: feature:864132-864242:1:exon
so has part: feature:864363-864447:1:exon
so has part: feature:864523-864665:1:exon
so has part: feature:864743-864924:1:exon
so has part: feature:865123-865261:1:exon
so has part: feature:865349-865441:1:exon
so has part: feature:865601-865827:1:exon
so has part: feature:865906-866068:1:exon
so has part: feature:866155-866301:1:exon
so has part: feature:866493-866617:1:exon
so has part: feature:866795-867179:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:861359-861450:1:exon

position:861450:1
position: 861450
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:863649-863744:1:exon

position:863649:1
position: 863649
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:863744:1
position: 863744
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:864132-864242:1:exon

position:864132:1
position: 864132
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:864242:1
position: 864242
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:864363-864447:1:exon

position:864363:1
position: 864363
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:864447:1
position: 864447
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:864523-864665:1:exon

position:864523:1
position: 864523
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:864665:1
position: 864665
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:864743-864924:1:exon

position:864743:1
position: 864743
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:864924:1
position: 864924
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:865123-865261:1:exon

position:865123:1
position: 865123
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:865261:1
position: 865261
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:865349-865441:1:exon

position:865349:1
position: 865349
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:865441:1
position: 865441
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:865601-865827:1:exon

position:865601:1
position: 865601
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:865827:1
position: 865827
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:865906-866068:1:exon

position:865906:1
position: 865906
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:866068:1
position: 866068
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:866155-866301:1:exon

position:866155:1
position: 866155
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:866301:1
position: 866301
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:866493-866617:1:exon

position:866493:1
position: 866493
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:866617:1
position: 866617
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:866795-867179:1:exon

position:866795:1
position: 866795
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

NOX1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 87175
gene: NOX1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: NADPH oxidase 1
translation: MAAWLGINIFLFTYYFLFFDRDERYFYTRAILGSALAWARASAKCLNFNSMLILLPVCRNLLSFLRGTCSCCRRTLRKQLDHNLTFHKLVAYALALLTAVHTIAHLFNLERYNQSQQATDGSLAAVLSKMHLQGSEWLNPIHSSQTTVEYVAFTTIPGLTGVIITLALILMVTSSTEFIRRNYFELFWYTHHLFLVYFAGLVIHGIAGLVRGQTEQSMAEVHPYDCAKYLTQREQNCTHSCCKDPEFGSIPAESWKWVLAPIILYVFERLLRVWRAQQKVVVKKVVMHPARVLELQMQKKGFRMEVGQYIFVNCPAISALEWHPFTLTSAPEEDFFSIHIRAAGDWTERLIDTFQLETPRVEVDGPFGTASEDVFQYEVAMLVGAGIGVTPFASILKSIWYKFQQGDQTLKTKKIYFYWLCRDTGAFAWFNDLLGSLEQKMAESGKADFLTYRLFLTGWDTSIANNVALHFDTATDTVTGLRHKTIFGRPMWNTEFAAVAAAHPRSVVGVFLCGPEALAKSLQKSCHQHSSLDPRKVKFYFNKENF
SIO_010081: NOX1
subclass of: SO_0000673
so part of: NOX1
location: join(861448..861450,863649..863744,864132..864242,864363..864447,864523..864665,864743..864924,865123..865261,865349..865441,865601..865827,865906..866068,866155..866301,866493..866617,866795..866921)
location: region:861448-866921:1
so has part: feature:861448-861450:1:exon
so has part: feature:863649-863744:1:exon
so has part: feature:864132-864242:1:exon
so has part: feature:864363-864447:1:exon
so has part: feature:864523-864665:1:exon
so has part: feature:864743-864924:1:exon
so has part: feature:865123-865261:1:exon
so has part: feature:865349-865441:1:exon
so has part: feature:865601-865827:1:exon
so has part: feature:865906-866068:1:exon
so has part: feature:866155-866301:1:exon
so has part: feature:866493-866617:1:exon
so has part: feature:866795-866921:1:exon

XP_030823414.1
type: Protein
SIO_000068: ncbiprotein

position:861448:1
position: 861448
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:866921:1
position: 866921
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:861448-861450:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:863649-863744:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:864132-864242:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:864363-864447:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:864523-864665:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:864743-864924:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:865123-865261:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:865349-865441:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:865601-865827:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:865906-866068:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:866155-866301:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:866493-866617:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:866795-866921:1:exon

CSTF2
type: Gene
subclass of: SO_0000704
RO_0002162: 87175
gene: CSTF2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(867856..875364)
location: region:867856-875364:-1
so has part: feature:867856-875364:-1:exon
subclass of: SO_0000010

115914936
type: Gene
SIO_000068: ncbigene

position:867856:-1
position: 867856
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:875364:-1
position: 875364
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:867856-875364:-1:exon

CSTF2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 87175
gene: CSTF2
product: cleavage stimulation factor subunit 2
exception: unclassified transcription discrepancy
note: The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: inserted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 ESTs, 1 Protein, and 92% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
transcript id: XM_030967821.1
SIO_010081: CSTF2
subclass of: SO_0000673
so part of: CSTF2
location: complement(join(867856..868039,868165..868290,868429..868554,868912..869174,869471..869622,869988..870128,870738..870797,871890..871952,872260..872383,872498..872653,872754..872873,872988..873124,873596..873765,875045..875123,875266..875364))
location: region:867856-875364:-1
so has part: feature:875266-875364:-1:exon
so has part: feature:875045-875123:-1:exon
so has part: feature:873596-873765:-1:exon
so has part: feature:872988-873124:-1:exon
so has part: feature:872754-872873:-1:exon
so has part: feature:872498-872653:-1:exon
so has part: feature:872260-872383:-1:exon
so has part: feature:871890-871952:-1:exon
so has part: feature:870738-870797:-1:exon
so has part: feature:869988-870128:-1:exon
so has part: feature:869471-869622:-1:exon
so has part: feature:868912-869174:-1:exon
so has part: feature:868429-868554:-1:exon
so has part: feature:868165-868290:-1:exon
so has part: feature:867856-868039:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:875266-875364:-1:exon

position:875266:-1
position: 875266
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:875045-875123:-1:exon

position:875045:-1
position: 875045
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:875123:-1
position: 875123
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:873596-873765:-1:exon

position:873596:-1
position: 873596
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:873765:-1
position: 873765
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:872988-873124:-1:exon

position:872988:-1
position: 872988
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:873124:-1
position: 873124
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:872754-872873:-1:exon

position:872754:-1
position: 872754
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:872873:-1
position: 872873
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:872498-872653:-1:exon

position:872498:-1
position: 872498
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:872653:-1
position: 872653
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:872260-872383:-1:exon

position:872260:-1
position: 872260
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:872383:-1
position: 872383
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:871890-871952:-1:exon

position:871890:-1
position: 871890
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:871952:-1
position: 871952
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:870738-870797:-1:exon

position:870738:-1
position: 870738
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:870797:-1
position: 870797
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:869988-870128:-1:exon

position:869988:-1
position: 869988
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:870128:-1
position: 870128
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:869471-869622:-1:exon

position:869471:-1
position: 869471
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:869622:-1
position: 869622
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:868912-869174:-1:exon

position:868912:-1
position: 868912
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:869174:-1
position: 869174
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:868429-868554:-1:exon

position:868429:-1
position: 868429
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:868554:-1
position: 868554
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:868165-868290:-1:exon

position:868165:-1
position: 868165
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:868290:-1
position: 868290
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:867856-868039:-1:exon

position:868039:-1
position: 868039
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

CSTF2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 87175
gene: CSTF2
exception: unclassified translation discrepancy
note: The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: inserted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: LOW QUALITY PROTEIN: cleavage stimulation factor subunit 2
translation: MAGLSVRDPAVDRSLRSVFVGNIPYEATEEQLKDIFSEVGPVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMRNLNGREFSGRALRVDNAASEKNKEELKSLGTGAPIIESPYGDPVNPEDAPESISRAVASLPPEQMFELMKQMKLCVQNSPQEARNMLLQNPQLAYALLQAQVVMRIVDPEIALKILHRQTSVPPLIPGNQQAVPGPGPGPGPGPGPGPNAQLNPQNTPSSQPQAIGGMHVNGAPPLMQPPMQGGVPAPGQMAAPVQGPGPGPMAPGGGMQPQVGMPGAGPVPLERGQGNLQLSPVGPARPASIERVQVPMPDPRAPMQRGPLPASXPATRGLLGDAPNDPRGGTLLSVTGEVEPRGYLGPPHQGAPMHHMPGHDSRGPPHEMRGGPMGEPRPLMGEPRGPLMDARVGRDPRGLEPRGLEPRVMEARALEARGLEPRVLEPRVLEARAMEARVLEPRGLEPRGPGPNPRGPMPGGIQGPGPLNMGASGPQGPRQVPNMAGAGMQGGGIPGAGVQGAGQPGGFSPGQSQVTPQDHEKAALIMQVLQLTADQIAMLPPEQRQSILILKEQIQKSTGAP
SIO_010081: CSTF2
subclass of: SO_0000673
so part of: CSTF2
location: complement(join(868168..868290,868429..868554,868912..869174,869471..869622,869988..870128,870738..870797,871890..871952,872260..872383,872498..872653,872754..872873,872988..873124,873596..873765,875045..875123,875266..875323))
location: region:868168-875323:-1
so has part: feature:875266-875323:-1:exon
so has part: feature:875045-875123:-1:exon
so has part: feature:873596-873765:-1:exon
so has part: feature:872988-873124:-1:exon
so has part: feature:872754-872873:-1:exon
so has part: feature:872498-872653:-1:exon
so has part: feature:872260-872383:-1:exon
so has part: feature:871890-871952:-1:exon
so has part: feature:870738-870797:-1:exon
so has part: feature:869988-870128:-1:exon
so has part: feature:869471-869622:-1:exon
so has part: feature:868912-869174:-1:exon
so has part: feature:868429-868554:-1:exon
so has part: feature:868168-868290:-1:exon

XP_030823681.1
type: Protein
SIO_000068: ncbiprotein

position:868168:-1
position: 868168
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:875323:-1
position: 875323
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:875266-875323:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:875045-875123:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:873596-873765:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:872988-873124:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:872754-872873:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:872498-872653:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:872260-872383:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:871890-871952:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:870738-870797:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:869988-870128:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:869471-869622:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:868912-869174:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:868429-868554:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:868168-868290:-1:exon

TRMT12
type: Gene
subclass of: SO_0000704
RO_0002162: 87175
gene: TRMT12
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 875405..879030
location: region:875405-879030:1
so has part: feature:875405-879030:1:exon
subclass of: SO_0000010

115914937
type: Gene
SIO_000068: ncbigene

position:875405:1
position: 875405
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:879030:1
position: 879030
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:875405-879030:1:exon

TRMT12
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 87175
gene: TRMT12
product: tRNA methyltransferase 12 homolog
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XM_030967822.1
SIO_010081: TRMT12
subclass of: SO_0000673
so part of: TRMT12
location: join(875405..875710,875794..875941,876015..876204,876953..877103,877174..877283,877900..878057,878143..879030)
location: region:875405-879030:1
so has part: feature:875405-875710:1:exon
so has part: feature:875794-875941:1:exon
so has part: feature:876015-876204:1:exon
so has part: feature:876953-877103:1:exon
so has part: feature:877174-877283:1:exon
so has part: feature:877900-878057:1:exon
so has part: feature:878143-879030:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:875405-875710:1:exon

position:875710:1
position: 875710
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:875794-875941:1:exon

position:875794:1
position: 875794
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:875941:1
position: 875941
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:876015-876204:1:exon

position:876015:1
position: 876015
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:876204:1
position: 876204
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:876953-877103:1:exon

position:876953:1
position: 876953
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:877103:1
position: 877103
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:877174-877283:1:exon

position:877174:1
position: 877174
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:877283:1
position: 877283
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:877900-878057:1:exon

position:877900:1
position: 877900
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:878057:1
position: 878057
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:878143-879030:1:exon

position:878143:1
position: 878143
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

TRMT12
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 87175
gene: TRMT12
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: tRNA wybutosine-synthesizing protein 2 homolog
translation: MEGTEVPVAVPTGVPALATEPRFAQRLRQCLEQERLLDGRYGLQRVPGGRVAVPLLPEKLSQLCLPAEVPCELLGIQDPVPSRAARRRSPAQRLREELRRLLGAGWSGELQRDVPHAWQRHGDLVLLSEDSFRAEPWERLGSALWETVAAALGARRVARRGRVMPDGMRSPRVTLLLGQHGWVEHVDNGIRYTFDVTKCMFSPGNITEKLRVASLPCSGEVVVDLYAGIGYFTLPFLVHAGAAFVHACEWNSHAVEALHRSLVLNGVRDRCHIHSGDSRQLQLRDVADRVNLGLIPSSEEGWPVACRVLKKATGGVLHIHHNVETRPALPQSAVLLAERGSAEAASPGGEAQHLAQHGGEETLGARLRPEWQSWAEGTAARIQGLLAQLHGRPWRSSVLHIEPVKSYAPHVHHLVLDLECRPVLPV
SIO_010081: TRMT12
subclass of: SO_0000673
so part of: TRMT12
location: join(875628..875710,875794..875941,876015..876204,876953..877103,877174..877283,877900..878057,878143..878583)
location: region:875628-878583:1
so has part: feature:875628-875710:1:exon
so has part: feature:875794-875941:1:exon
so has part: feature:876015-876204:1:exon
so has part: feature:876953-877103:1:exon
so has part: feature:877174-877283:1:exon
so has part: feature:877900-878057:1:exon
so has part: feature:878143-878583:1:exon

XP_030823682.1
type: Protein
SIO_000068: ncbiprotein

position:875628:1
position: 875628
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:878583:1
position: 878583
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:875628-875710:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:875794-875941:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:876015-876204:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:876953-877103:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:877174-877283:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:877900-878057:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:878143-878583:1:exon

SYTL4
type: Gene
subclass of: SO_0000704
RO_0002162: 87175
gene: SYTL4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 879832..887454
location: region:879832-887454:1
so has part: feature:879832-887454:1:exon
subclass of: SO_0000010

115914808
type: Gene
SIO_000068: ncbigene

position:879832:1
position: 879832
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:887454:1
position: 887454
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:879832-887454:1:exon

SYTL4
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 87175
gene: SYTL4
product: synaptotagmin like 4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 ESTs, 14 Proteins, and 97% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_030967580.1
SIO_010081: SYTL4
subclass of: SO_0000673
so part of: SYTL4
location: join(879832..879870,880544..880691,880821..881036,881553..881662,881832..881946,882107..882213,882337..882340,882451..882565,882672..882762,882914..883017,883123..883209,883532..883710,883897..883999,884839..885000,885412..885517,885882..885981,886214..886422,887193..887454)
location: region:879832-887454:1
so has part: feature:879832-879870:1:exon
so has part: feature:880544-880691:1:exon
so has part: feature:880821-881036:1:exon
so has part: feature:881553-881662:1:exon
so has part: feature:881832-881946:1:exon
so has part: feature:882107-882213:1:exon
so has part: feature:882337-882340:1:exon
so has part: feature:882451-882565:1:exon
so has part: feature:882672-882762:1:exon
so has part: feature:882914-883017:1:exon
so has part: feature:883123-883209:1:exon
so has part: feature:883532-883710:1:exon
so has part: feature:883897-883999:1:exon
so has part: feature:884839-885000:1:exon
so has part: feature:885412-885517:1:exon
so has part: feature:885882-885981:1:exon
so has part: feature:886214-886422:1:exon
so has part: feature:887193-887454:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:879832-879870:1:exon

position:879870:1
position: 879870
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:880544-880691:1:exon

position:880544:1
position: 880544
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:880691:1
position: 880691
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:880821-881036:1:exon

position:880821:1
position: 880821
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:881036:1
position: 881036
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:881553-881662:1:exon

position:881553:1
position: 881553
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:881662:1
position: 881662
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:881832-881946:1:exon

position:881832:1
position: 881832
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:881946:1
position: 881946
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:882107-882213:1:exon

position:882107:1
position: 882107
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:882213:1
position: 882213
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:882337-882340:1:exon

position:882337:1
position: 882337
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:882340:1
position: 882340
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:882451-882565:1:exon

position:882451:1
position: 882451
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:882565:1
position: 882565
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:882672-882762:1:exon

position:882672:1
position: 882672
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:882762:1
position: 882762
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:882914-883017:1:exon

position:882914:1
position: 882914
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:883017:1
position: 883017
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:883123-883209:1:exon

position:883123:1
position: 883123
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:883209:1
position: 883209
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:883532-883710:1:exon

position:883532:1
position: 883532
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:883710:1
position: 883710
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:883897-883999:1:exon

position:883897:1
position: 883897
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:883999:1
position: 883999
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:884839-885000:1:exon

position:884839:1
position: 884839
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:885000:1
position: 885000
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:885412-885517:1:exon

position:885412:1
position: 885412
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:885517:1
position: 885517
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:885882-885981:1:exon

position:885882:1
position: 885882
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:885981:1
position: 885981
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:886214-886422:1:exon

position:886214:1
position: 886214
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:886422:1
position: 886422
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:887193-887454:1:exon

position:887193:1
position: 887193
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

SYTL4
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 87175
gene: SYTL4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: synaptotagmin-like protein 4
translation: MSEAVDLSFLSDVERDLILQVLQRDEELRKAEERRIRRLKNELLEIRRRGAKRGSQRYSERTCARCQQSLGRLSPKANTCRGCNHLVCRDCRSYSPSGSWHCKVCTKEAELKKTTGDWFYDQRVNRFANHLGSDMVRLSLRHRPAASKRETVGQTLLQKAQLSEPKSSSAARQPSPPAPREGSSLFPDASEPRDGKSDTESMENMSLDSYRPSPADVGAGRRNSLERAIPGKQVVGPAGPASSSLTLPLRSKKAFSDGRDAAGGTRSSTLVDEHETIFKKNPRRVVRPADYTKSVIDLRPEDLVGEGGSLGDRSKSVPGLNTELEEEEEDIDNLVEIHRQRVARGSMRSGTSSSTLGSMVSIYSEAGDFGSVAVTGGISFSLSYEQKTQTLFIHVKECRQLAFGDEGRKRSNPYVKTYLLPDKSRQGKRKTTIKRNTINPLYNELLKYEISKSLLLARTLQFSVWHHDRFGRNTFLGEAEVPLGAWNFESHLEEFLPLHGKIGADAAGLHQYKGELVVSMKYIPSAKQPGAGNGRKGKTGEGGELQVWIKEAKNLTAAKSGGTSDSFVKGYLLPHKNKASKRKTPVVKKTLNPHYNHTFVYNGIKAEELQHLCLELTVWDWEPLSSNDFLGGVRLGVGTGMSNGQAVDWMDSTGEELNLWQKMCQYPGSWAEGTLQLRSTMARLGP
SIO_010081: SYTL4
subclass of: SO_0000673
so part of: SYTL4
location: join(880582..880691,880821..881036,881553..881662,881832..881946,882107..882213,882337..882340,882451..882565,882672..882762,882914..883017,883123..883209,883532..883710,883897..883999,884839..885000,885412..885517,885882..885981,886214..886422,887193..887335)
location: region:880582-887335:1
so has part: feature:880582-880691:1:exon
so has part: feature:880821-881036:1:exon
so has part: feature:881553-881662:1:exon
so has part: feature:881832-881946:1:exon
so has part: feature:882107-882213:1:exon
so has part: feature:882337-882340:1:exon
so has part: feature:882451-882565:1:exon
so has part: feature:882672-882762:1:exon
so has part: feature:882914-883017:1:exon
so has part: feature:883123-883209:1:exon
so has part: feature:883532-883710:1:exon
so has part: feature:883897-883999:1:exon
so has part: feature:884839-885000:1:exon
so has part: feature:885412-885517:1:exon
so has part: feature:885882-885981:1:exon
so has part: feature:886214-886422:1:exon
so has part: feature:887193-887335:1:exon

XP_030823440.1
type: Protein
SIO_000068: ncbiprotein

position:880582:1
position: 880582
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:887335:1
position: 887335
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:880582-880691:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:880821-881036:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:881553-881662:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:881832-881946:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:882107-882213:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:882337-882340:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:882451-882565:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:882672-882762:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:882914-883017:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:883123-883209:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:883532-883710:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:883897-883999:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:884839-885000:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:885412-885517:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:885882-885981:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:886214-886422:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:887193-887335:1:exon

SRPX2
type: Gene
subclass of: SO_0000704
RO_0002162: 87175
gene: SRPX2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(887882..893410)
location: region:887882-893410:-1
so has part: feature:887882-893410:-1:exon
subclass of: SO_0000010

115914970
type: Gene
SIO_000068: ncbigene

position:887882:-1
position: 887882
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:893410:-1
position: 893410
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:887882-893410:-1:exon

SRPX2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 87175
gene: SRPX2
product: sushi repeat containing protein X-linked 2, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 25 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_030967877.1
SIO_010081: SRPX2
subclass of: SO_0000673
so part of: SRPX2
location: complement(join(887882..888583,888867..888988,889058..889191,889306..889485,889592..889713,889801..889927,890479..890655,890767..890958,891045..891128,892801..892913,893029..893410))
location: region:887882-893410:-1
so has part: feature:893029-893410:-1:exon
so has part: feature:892801-892913:-1:exon
so has part: feature:891045-891128:-1:exon
so has part: feature:890767-890958:-1:exon
so has part: feature:890479-890655:-1:exon
so has part: feature:889801-889927:-1:exon
so has part: feature:889592-889713:-1:exon
so has part: feature:889306-889485:-1:exon
so has part: feature:889058-889191:-1:exon
so has part: feature:888867-888988:-1:exon
so has part: feature:887882-888583:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:893029-893410:-1:exon

position:893029:-1
position: 893029
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:892801-892913:-1:exon

position:892801:-1
position: 892801
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:892913:-1
position: 892913
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:891045-891128:-1:exon

position:891045:-1
position: 891045
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:891128:-1
position: 891128
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:890767-890958:-1:exon

position:890767:-1
position: 890767
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:890958:-1
position: 890958
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:890479-890655:-1:exon

position:890479:-1
position: 890479
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:890655:-1
position: 890655
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:889801-889927:-1:exon

position:889801:-1
position: 889801
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:889927:-1
position: 889927
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:889592-889713:-1:exon

position:889592:-1
position: 889592
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:889713:-1
position: 889713
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:889306-889485:-1:exon

position:889306:-1
position: 889306
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:889485:-1
position: 889485
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:889058-889191:-1:exon

position:889058:-1
position: 889058
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:889191:-1
position: 889191
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:888867-888988:-1:exon

position:888867:-1
position: 888867
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:888988:-1
position: 888988
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:887882-888583:-1:exon

position:888583:-1
position: 888583
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

SRPX2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 87175
gene: SRPX2
product: sushi repeat containing protein X-linked 2, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 22 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_030967874.1
SIO_010081: SRPX2
subclass of: SO_0000673
so part of: SRPX2
location: complement(join(887882..888583,888867..888988,889058..889191,889306..889485,889592..889713,889801..889927,890479..890655,890767..890958,891045..891128,891524..891746))
location: region:887882-891746:-1
so has part: feature:891524-891746:-1:exon
so has part: feature:891045-891128:-1:exon
so has part: feature:890767-890958:-1:exon
so has part: feature:890479-890655:-1:exon
so has part: feature:889801-889927:-1:exon
so has part: feature:889592-889713:-1:exon
so has part: feature:889306-889485:-1:exon
so has part: feature:889058-889191:-1:exon
so has part: feature:888867-888988:-1:exon
so has part: feature:887882-888583:-1:exon

position:891746:-1
position: 891746
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:891524-891746:-1:exon

position:891524:-1
position: 891524
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:891045-891128:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:890767-890958:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:890479-890655:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:889801-889927:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:889592-889713:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:889306-889485:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:889058-889191:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:888867-888988:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:887882-888583:-1:exon

SRPX2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 87175
gene: SRPX2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: sushi repeat-containing protein SRPX2 isoform X2
translation: MFGMGSQGGKARGCSRPQHGGRAARNGMAAPVLLLLLARLVASTWHEGSGYYLESHTNEVYAEEPPPEPALDYRRVPQWCATLSIHRGEATCYSPRGSSYRSSLGTRCELSCARGYRLLGPSAVRCLPSRHWSGMAYCRQIRCHVLPAVLRGSYVCSAGVQMDSRCDYTCQPGYQLEGDRSRICMEDGRWSGSEPVCVDLEPPKIRCPDSRERIAEPGKLTATVYWDPPRVRDSADGVIKRVMLRGPEPGSEFPEGEHVIRYTAHDQAYNRASCKFSIRVRVRRCPVLKPPQNGYISCTSDGNNYGATCEYLCDGGYERQGTSLRVCQSSQHWTGSQPLCAPMQINTDVSSAASLLDQFHEKRRLLVISAPDPSNRYYKMQISMLQQAACGLDLRHVTTVELLGQPPHELGRIREHRLSLGIIEELRRYLHLTRSHFNAVLLDKAGTDRERYIAPVSPDELFVFIDTYLLSEREAARRAQSGDPCE
SIO_010081: SRPX2
subclass of: SO_0000673
so part of: SRPX2
location: complement(join(888403..888583,888867..888988,889058..889191,889306..889485,889592..889713,889801..889927,890479..890655,890767..890958,891045..891128,892801..892913,893029..893057))
location: region:888403-893057:-1
so has part: feature:893029-893057:-1:exon
so has part: feature:892801-892913:-1:exon
so has part: feature:891045-891128:-1:exon
so has part: feature:890767-890958:-1:exon
so has part: feature:890479-890655:-1:exon
so has part: feature:889801-889927:-1:exon
so has part: feature:889592-889713:-1:exon
so has part: feature:889306-889485:-1:exon
so has part: feature:889058-889191:-1:exon
so has part: feature:888867-888988:-1:exon
so has part: feature:888403-888583:-1:exon

XP_030823737.1
type: Protein
SIO_000068: ncbiprotein

position:888403:-1
position: 888403
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:893057:-1
position: 893057
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:893029-893057:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:892801-892913:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:891045-891128:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:890767-890958:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:890479-890655:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:889801-889927:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:889592-889713:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:889306-889485:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:889058-889191:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:888867-888988:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:888403-888583:-1:exon

SRPX2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 87175
gene: SRPX2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: sushi repeat-containing protein SRPX2 isoform X1
translation: MKAQAGPQGWHGAVLSPSPGPLRGTAGQGPASPAEPLQQLHPFLDHGHPQQPPAGQRARHPFLGSGYYLESHTNEVYAEEPPPEPALDYRRVPQWCATLSIHRGEATCYSPRGSSYRSSLGTRCELSCARGYRLLGPSAVRCLPSRHWSGMAYCRQIRCHVLPAVLRGSYVCSAGVQMDSRCDYTCQPGYQLEGDRSRICMEDGRWSGSEPVCVDLEPPKIRCPDSRERIAEPGKLTATVYWDPPRVRDSADGVIKRVMLRGPEPGSEFPEGEHVIRYTAHDQAYNRASCKFSIRVRVRRCPVLKPPQNGYISCTSDGNNYGATCEYLCDGGYERQGTSLRVCQSSQHWTGSQPLCAPMQINTDVSSAASLLDQFHEKRRLLVISAPDPSNRYYKMQISMLQQAACGLDLRHVTTVELLGQPPHELGRIREHRLSLGIIEELRRYLHLTRSHFNAVLLDKAGTDRERYIAPVSPDELFVFIDTYLLSEREAARRAQSGDPCE
SIO_010081: SRPX2
subclass of: SO_0000673
so part of: SRPX2
location: complement(join(888403..888583,888867..888988,889058..889191,889306..889485,889592..889713,889801..889927,890479..890655,890767..890958,891045..891128,891524..891713))
location: region:888403-891713:-1
so has part: feature:891524-891713:-1:exon
so has part: feature:891045-891128:-1:exon
so has part: feature:890767-890958:-1:exon
so has part: feature:890479-890655:-1:exon
so has part: feature:889801-889927:-1:exon
so has part: feature:889592-889713:-1:exon
so has part: feature:889306-889485:-1:exon
so has part: feature:889058-889191:-1:exon
so has part: feature:888867-888988:-1:exon
so has part: feature:888403-888583:-1:exon

XP_030823734.1
type: Protein
SIO_000068: ncbiprotein

position:891713:-1
position: 891713
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:891524-891713:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:891045-891128:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:890767-890958:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:890479-890655:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:889801-889927:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:889592-889713:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:889306-889485:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:889058-889191:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:888867-888988:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:888403-888583:-1:exon

TSPAN6
type: Gene
subclass of: SO_0000704
RO_0002162: 87175
gene: TSPAN6
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 893530..900859
location: region:893530-900859:1
so has part: feature:893530-900859:1:exon
subclass of: SO_0000010

115914971
type: Gene
SIO_000068: ncbigene

position:893530:1
position: 893530
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:900859:1
position: 900859
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:893530-900859:1:exon

TSPAN6
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 87175
gene: TSPAN6
product: tetraspanin 6
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 11 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_030967878.1
SIO_010081: TSPAN6
subclass of: SO_0000673
so part of: TSPAN6
location: join(893530..893631,894754..894855,894950..895138,895422..895496,896755..896853,897159..897314,897948..898031,899734..899833,900214..900859)
location: region:893530-900859:1
so has part: feature:893530-893631:1:exon
so has part: feature:894754-894855:1:exon
so has part: feature:894950-895138:1:exon
so has part: feature:895422-895496:1:exon
so has part: feature:896755-896853:1:exon
so has part: feature:897159-897314:1:exon
so has part: feature:897948-898031:1:exon
so has part: feature:899734-899833:1:exon
so has part: feature:900214-900859:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:893530-893631:1:exon

position:893631:1
position: 893631
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:894754-894855:1:exon

position:894754:1
position: 894754
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:894855:1
position: 894855
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:894950-895138:1:exon

position:894950:1
position: 894950
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:895138:1
position: 895138
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:895422-895496:1:exon

position:895422:1
position: 895422
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:895496:1
position: 895496
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:896755-896853:1:exon

position:896755:1
position: 896755
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:896853:1
position: 896853
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:897159-897314:1:exon

position:897159:1
position: 897159
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:897314:1
position: 897314
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:897948-898031:1:exon

position:897948:1
position: 897948
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:898031:1
position: 898031
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:899734-899833:1:exon

position:899734:1
position: 899734
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:899833:1
position: 899833
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:900214-900859:1:exon

position:900214:1
position: 900214
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

TSPAN6
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 87175
gene: TSPAN6
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: tetraspanin-6
translation: MASPSRRLQTKPVITCLKSVLLTYTFVFWVSGIVLLAVGIWGRVSLAVYFSLLDEKATNVPFVLVGAGTVVVLLGTFGCFATCRGSTWMLKLYAMLLSLIFLIVLVAAIVGFVFRHEIKTSFESNLELALKDYNVTADPHSEAVDTIQRTLHCCGVQNYSDWERTEYFSQRGIPRSCCKNQNDCSEQDLKDPNKARLKVFVNGCFFLVTSTMESKMSVVAGISFGIACFQLIGIILSCCLSRYITNNQYEMV
SIO_010081: TSPAN6
subclass of: SO_0000673
so part of: TSPAN6
location: join(894769..894855,894950..895138,895422..895496,896755..896853,897159..897314,897948..898031,899734..899802)
location: region:894769-899802:1
so has part: feature:894769-894855:1:exon
so has part: feature:894950-895138:1:exon
so has part: feature:895422-895496:1:exon
so has part: feature:896755-896853:1:exon
so has part: feature:897159-897314:1:exon
so has part: feature:897948-898031:1:exon
so has part: feature:899734-899802:1:exon

XP_030823738.1
type: Protein
SIO_000068: ncbiprotein

position:894769:1
position: 894769
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:899802:1
position: 899802
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:894769-894855:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:894950-895138:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:895422-895496:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:896755-896853:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:897159-897314:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:897948-898031:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:899734-899802:1:exon

TNMD
type: Gene
subclass of: SO_0000704
RO_0002162: 87175
gene: TNMD
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(902979..912044)
location: region:902979-912044:-1
so has part: feature:902979-912044:-1:exon
subclass of: SO_0000010

115914891
type: Gene
SIO_000068: ncbigene

position:902979:-1
position: 902979
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:912044:-1
position: 912044
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:902979-912044:-1:exon

TNMD
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 87175
gene: TNMD
product: tenomodulin
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XM_030967734.1
SIO_010081: TNMD
subclass of: SO_0000673
so part of: TNMD
location: complement(join(902979..903595,903955..904127,905331..905484,907183..907284,908079..908219,911700..911834,911955..912044))
location: region:902979-912044:-1
so has part: feature:911955-912044:-1:exon
so has part: feature:911700-911834:-1:exon
so has part: feature:908079-908219:-1:exon
so has part: feature:907183-907284:-1:exon
so has part: feature:905331-905484:-1:exon
so has part: feature:903955-904127:-1:exon
so has part: feature:902979-903595:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:911955-912044:-1:exon

position:911955:-1
position: 911955
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:911700-911834:-1:exon

position:911700:-1
position: 911700
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:911834:-1
position: 911834
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:908079-908219:-1:exon

position:908079:-1
position: 908079
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:908219:-1
position: 908219
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:907183-907284:-1:exon

position:907183:-1
position: 907183
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:907284:-1
position: 907284
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:905331-905484:-1:exon

position:905331:-1
position: 905331
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:905484:-1
position: 905484
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:903955-904127:-1:exon

position:903955:-1
position: 903955
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:904127:-1
position: 904127
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:902979-903595:-1:exon

position:903595:-1
position: 903595
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

TNMD
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 87175
gene: TNMD
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: tenomodulin
translation: MGGTAGRSPERCRFLDAEAAKPREKSCPRYQLCGLLFSLLLLSLILIFFGVRYLWNPAPRKVYDMEHTFFSNGEKKKIVMEIDPLARTETFSSGNGSEEILEIHDFKNGITGIFFVGLQKCFIKSQTKVLPETTEAKIPELEGQEITTTYFEQSVVWVPGEKPIQNKEFLRSSKIFDICKNVTIFWIHPTPIAAPELANLEGAEEEEPELQMDSQSWLDEGNEHELEEDTRAGPKRRARQLTEEELPVNDYSENGLEFHPLWDERGYCCAQCRRAHRYCRRVCEPLLGYHPYPYCYQGGRVICRVIMPCNWWIARMLGRV
SIO_010081: TNMD
subclass of: SO_0000673
so part of: TNMD
location: complement(join(903386..903595,903955..904127,905331..905484,907183..907284,908079..908219,911700..911834,911955..912002))
location: region:903386-912002:-1
so has part: feature:911955-912002:-1:exon
so has part: feature:911700-911834:-1:exon
so has part: feature:908079-908219:-1:exon
so has part: feature:907183-907284:-1:exon
so has part: feature:905331-905484:-1:exon
so has part: feature:903955-904127:-1:exon
so has part: feature:903386-903595:-1:exon

XP_030823594.1
type: Protein
SIO_000068: ncbiprotein

position:903386:-1
position: 903386
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:912002:-1
position: 912002
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:911955-912002:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:911700-911834:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:908079-908219:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:907183-907284:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:905331-905484:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:903955-904127:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:903386-903595:-1:exon

PCDH19
type: Gene
subclass of: SO_0000704
RO_0002162: 87175
gene: PCDH19
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 936566..994383
location: region:936566-994383:1
so has part: feature:936566-994383:1:exon
subclass of: SO_0000010

115914851
type: Gene
SIO_000068: ncbigene

position:936566:1
position: 936566
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:994383:1
position: 994383
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:936566-994383:1:exon

PCDH19
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 87175
gene: PCDH19
product: protocadherin 19, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 mRNAs, 5 ESTs, 8 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_030967660.1
SIO_010081: PCDH19
subclass of: SO_0000673
so part of: PCDH19
location: join(936566..938717,941584..941911,964228..964286,967856..968028,990290..994383)
location: region:936566-994383:1
so has part: feature:936566-938717:1:exon
so has part: feature:941584-941911:1:exon
so has part: feature:964228-964286:1:exon
so has part: feature:967856-968028:1:exon
so has part: feature:990290-994383:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:936566-938717:1:exon

position:938717:1
position: 938717
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:941584-941911:1:exon

position:941584:1
position: 941584
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:941911:1
position: 941911
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:964228-964286:1:exon

position:964228:1
position: 964228
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:964286:1
position: 964286
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:967856-968028:1:exon

position:967856:1
position: 967856
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:968028:1
position: 968028
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:990290-994383:1:exon

position:990290:1
position: 990290
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

PCDH19
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 87175
gene: PCDH19
product: protocadherin 19, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 mRNAs, 5 ESTs, 8 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XM_030967661.1
SIO_010081: PCDH19
subclass of: SO_0000673
so part of: PCDH19
location: join(936566..938717,941584..941911,964228..964286,967859..968028,990290..994383)
location: region:936566-994383:1
so has part: feature:936566-938717:1:exon
so has part: feature:941584-941911:1:exon
so has part: feature:964228-964286:1:exon
so has part: feature:967859-968028:1:exon
so has part: feature:990290-994383:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:936566-938717:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:941584-941911:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:964228-964286:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:967859-968028:1:exon

position:967859:1
position: 967859
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:990290-994383:1:exon

PCDH19
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 87175
gene: PCDH19
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protocadherin-19 isoform X1
translation: MGALPALLGAALLWAGAGALVNLKYSVEEEQRAGTVIANVAKDARDAGFVLDPRQPAAFRVVSNSAPHLVDISPGSGLLVTKQKIDRDLLCRQSPKCVISLEVMSSSMEICVIKLEIKDLNDNAPSFPTDQIELEISETASPGTRVPLESAYDPDSGSFGVQSYEITPNDLFGLETKTRGDGSRFAELVVEKSLDRETQSHYSYVITALDGGDPPNFGTVELSIRVIDSNDNNPLFEEPAYTVSVPENAPPGTPVIRLNASDPDEGTNGQVLYSFHSYVSERARELFQIDPQSGLITVSGAIDYEEGHVYELDVQAKDLGPNSIPAHCKVTISVQDANDNPPLINLLSVNSELVEVSENAPPGYVIALVRVSDRDSGANGRVQCKLLGNVPFRLQEYESFSTILVDGRLDREQRDQYNLTIQARDNGIPSLQATKSFTVKITDENDNHPHFSKPYYQVIVQENNTPGAYLLSVSARDPDLGLNGSVSYQIVPSQVRDMPVFTYVSINPNSGDIYALRSFNHEQTKAFEFKVLAKDGGNPSLQSNATVRVIVLDVNDNTPVITAPPLVNGTAEVYIPRNAGVGYLVTVVKADDYDEGENGRLSYEMVEGDRGFFEIDQVNGEIRTTRAFGENAKTAYELIVVAHDHGKTSLSASALILIYLSPALDAQESIGSVNLSLIFIIALGSIAAILFVTMIFVAVKCKRDNKEIRTYNCRIAEYSYGHQKKSSKKKKISKNDIRLVPRDVEETDKMNVVSCSSLTSSLNYFDYHQQTLPLGCRRSESTFLNVESQNSRNTGSNHIYHHTFTGQSPQQPDLIINGMPLPETENYSFDSNYVNSRAHLIKSSSTFKDLEGNSLKDSGHEESDQTDSEHDVQRGLYCDTAVNDVLNTSVPSMGSQGPEQEQSEGFHCREECRILGHSDRCWMPRGAVPSRAKSPEHGRNVIALSIEATAVDAEPYADCGAKRTFATFGKEGGEPPAEERLANPKGKRTVDSAACCSPKVSGAVREAGNGCEAVSPVTSPLHLKSPLSGKPAAPYGAGHCAGGREPFGNSGPSRPSEAEPRGADSESSGQEGNPLLQASREKDSPGARRLKDIVL
SIO_010081: PCDH19
subclass of: SO_0000673
so part of: PCDH19
location: join(936577..938717,941584..941911,964228..964286,967856..968028,990290..990876)
location: region:936577-990876:1
so has part: feature:936577-938717:1:exon
so has part: feature:941584-941911:1:exon
so has part: feature:964228-964286:1:exon
so has part: feature:967856-968028:1:exon
so has part: feature:990290-990876:1:exon

XP_030823520.1
type: Protein
SIO_000068: ncbiprotein

position:936577:1
position: 936577
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:990876:1
position: 990876
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:936577-938717:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:941584-941911:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:964228-964286:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:967856-968028:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:990290-990876:1:exon

PCDH19
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 87175
gene: PCDH19
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protocadherin-19 isoform X2
translation: MGALPALLGAALLWAGAGALVNLKYSVEEEQRAGTVIANVAKDARDAGFVLDPRQPAAFRVVSNSAPHLVDISPGSGLLVTKQKIDRDLLCRQSPKCVISLEVMSSSMEICVIKLEIKDLNDNAPSFPTDQIELEISETASPGTRVPLESAYDPDSGSFGVQSYEITPNDLFGLETKTRGDGSRFAELVVEKSLDRETQSHYSYVITALDGGDPPNFGTVELSIRVIDSNDNNPLFEEPAYTVSVPENAPPGTPVIRLNASDPDEGTNGQVLYSFHSYVSERARELFQIDPQSGLITVSGAIDYEEGHVYELDVQAKDLGPNSIPAHCKVTISVQDANDNPPLINLLSVNSELVEVSENAPPGYVIALVRVSDRDSGANGRVQCKLLGNVPFRLQEYESFSTILVDGRLDREQRDQYNLTIQARDNGIPSLQATKSFTVKITDENDNHPHFSKPYYQVIVQENNTPGAYLLSVSARDPDLGLNGSVSYQIVPSQVRDMPVFTYVSINPNSGDIYALRSFNHEQTKAFEFKVLAKDGGNPSLQSNATVRVIVLDVNDNTPVITAPPLVNGTAEVYIPRNAGVGYLVTVVKADDYDEGENGRLSYEMVEGDRGFFEIDQVNGEIRTTRAFGENAKTAYELIVVAHDHGKTSLSASALILIYLSPALDAQESIGSVNLSLIFIIALGSIAAILFVTMIFVAVKCKRDNKEIRTYNCRIAEYSYGHQKKSSKKKKISKNDIRLVPRDVEETDKMNVVSCSSLTSSLNYFDYHQQTLPLGCRRSESTFLNVESQNSRNTGSNHIYHHTFTGQSPQQPDLIINGMPLPETENYSFDSNYVNSRAHLIKSSTFKDLEGNSLKDSGHEESDQTDSEHDVQRGLYCDTAVNDVLNTSVPSMGSQGPEQEQSEGFHCREECRILGHSDRCWMPRGAVPSRAKSPEHGRNVIALSIEATAVDAEPYADCGAKRTFATFGKEGGEPPAEERLANPKGKRTVDSAACCSPKVSGAVREAGNGCEAVSPVTSPLHLKSPLSGKPAAPYGAGHCAGGREPFGNSGPSRPSEAEPRGADSESSGQEGNPLLQASREKDSPGARRLKDIVL
SIO_010081: PCDH19
subclass of: SO_0000673
so part of: PCDH19
location: join(936577..938717,941584..941911,964228..964286,967859..968028,990290..990876)
location: region:936577-990876:1
so has part: feature:936577-938717:1:exon
so has part: feature:941584-941911:1:exon
so has part: feature:964228-964286:1:exon
so has part: feature:967859-968028:1:exon
so has part: feature:990290-990876:1:exon

XP_030823521.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:936577-938717:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:941584-941911:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:964228-964286:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:967859-968028:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:990290-990876:1:exon

DIAPH2
type: Gene
subclass of: SO_0000704
RO_0002162: 87175
gene: DIAPH2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1555568..1724035)
location: region:1555568-1724035:-1
so has part: feature:1555568-1724035:-1:exon
subclass of: SO_0000010

115914864
type: Gene
SIO_000068: ncbigene

position:1555568:-1
position: 1555568
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1724035:-1
position: 1724035
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1555568-1724035:-1:exon

DIAPH2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 87175
gene: DIAPH2
product: diaphanous related formin 2, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 10 ESTs, 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XM_030967679.1
SIO_010081: DIAPH2
subclass of: SO_0000673
so part of: DIAPH2
location: complement(join(1555568..1560344,1606361..1606456,1615901..1616036,1623953..1624117,1640167..1640291,1650947..1651076,1655479..1655718,1661692..1661793,1663567..1663661,1665116..1665217,1683395..1683509,1685910..1686578,1688186..1688290,1688907..1688971,1689259..1689377,1689921..1690037,1690972..1691090,1692251..1692361,1694651..1694762,1695539..1695675,1696645..1696714,1696795..1696869,1697252..1697391,1701485..1701505,1705033..1705137,1705987..1706163,1708408..1708440,1723828..1724035))
location: region:1555568-1724035:-1
so has part: feature:1723828-1724035:-1:exon
so has part: feature:1708408-1708440:-1:exon
so has part: feature:1705987-1706163:-1:exon
so has part: feature:1705033-1705137:-1:exon
so has part: feature:1701485-1701505:-1:exon
so has part: feature:1697252-1697391:-1:exon
so has part: feature:1696795-1696869:-1:exon
so has part: feature:1696645-1696714:-1:exon
so has part: feature:1695539-1695675:-1:exon
so has part: feature:1694651-1694762:-1:exon
so has part: feature:1692251-1692361:-1:exon
so has part: feature:1690972-1691090:-1:exon
so has part: feature:1689921-1690037:-1:exon
so has part: feature:1689259-1689377:-1:exon
so has part: feature:1688907-1688971:-1:exon
so has part: feature:1688186-1688290:-1:exon
so has part: feature:1685910-1686578:-1:exon
so has part: feature:1683395-1683509:-1:exon
so has part: feature:1665116-1665217:-1:exon
so has part: feature:1663567-1663661:-1:exon
so has part: feature:1661692-1661793:-1:exon
so has part: feature:1655479-1655718:-1:exon
so has part: feature:1650947-1651076:-1:exon
so has part: feature:1640167-1640291:-1:exon
so has part: feature:1623953-1624117:-1:exon
so has part: feature:1615901-1616036:-1:exon
so has part: feature:1606361-1606456:-1:exon
so has part: feature:1555568-1560344:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1723828-1724035:-1:exon

position:1723828:-1
position: 1723828
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1708408-1708440:-1:exon

position:1708408:-1
position: 1708408
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1708440:-1
position: 1708440
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1705987-1706163:-1:exon

position:1705987:-1
position: 1705987
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1706163:-1
position: 1706163
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1705033-1705137:-1:exon

position:1705033:-1
position: 1705033
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1705137:-1
position: 1705137
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1701485-1701505:-1:exon

position:1701485:-1
position: 1701485
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1701505:-1
position: 1701505
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1697252-1697391:-1:exon

position:1697252:-1
position: 1697252
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1697391:-1
position: 1697391
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1696795-1696869:-1:exon

position:1696795:-1
position: 1696795
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1696869:-1
position: 1696869
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1696645-1696714:-1:exon

position:1696645:-1
position: 1696645
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1696714:-1
position: 1696714
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:1695539-1695675:-1:exon

position:1695539:-1
position: 1695539
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1695675:-1
position: 1695675
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:1694651-1694762:-1:exon

position:1694651:-1
position: 1694651
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1694762:-1
position: 1694762
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:1692251-1692361:-1:exon

position:1692251:-1
position: 1692251
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1692361:-1
position: 1692361
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:1690972-1691090:-1:exon

position:1690972:-1
position: 1690972
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1691090:-1
position: 1691090
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:1689921-1690037:-1:exon

position:1689921:-1
position: 1689921
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1690037:-1
position: 1690037
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:1689259-1689377:-1:exon

position:1689259:-1
position: 1689259
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1689377:-1
position: 1689377
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:1688907-1688971:-1:exon

position:1688907:-1
position: 1688907
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1688971:-1
position: 1688971
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:1688186-1688290:-1:exon

position:1688186:-1
position: 1688186
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1688290:-1
position: 1688290
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:1685910-1686578:-1:exon

position:1685910:-1
position: 1685910
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1686578:-1
position: 1686578
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:1683395-1683509:-1:exon

position:1683395:-1
position: 1683395
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1683509:-1
position: 1683509
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:1665116-1665217:-1:exon

position:1665116:-1
position: 1665116
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1665217:-1
position: 1665217
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:1663567-1663661:-1:exon

position:1663567:-1
position: 1663567
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1663661:-1
position: 1663661
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:1661692-1661793:-1:exon

position:1661692:-1
position: 1661692
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1661793:-1
position: 1661793
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 22
SIO_000628: feature:1655479-1655718:-1:exon

position:1655479:-1
position: 1655479
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1655718:-1
position: 1655718
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 23
SIO_000628: feature:1650947-1651076:-1:exon

position:1650947:-1
position: 1650947
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1651076:-1
position: 1651076
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 24
SIO_000628: feature:1640167-1640291:-1:exon

position:1640167:-1
position: 1640167
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1640291:-1
position: 1640291
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 25
SIO_000628: feature:1623953-1624117:-1:exon

position:1623953:-1
position: 1623953
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1624117:-1
position: 1624117
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 26
SIO_000628: feature:1615901-1616036:-1:exon

position:1615901:-1
position: 1615901
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1616036:-1
position: 1616036
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 27
SIO_000628: feature:1606361-1606456:-1:exon

position:1606361:-1
position: 1606361
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1606456:-1
position: 1606456
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 28
SIO_000628: feature:1555568-1560344:-1:exon

position:1560344:-1
position: 1560344
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

DIAPH2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 87175
gene: DIAPH2
product: diaphanous related formin 2, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XM_030967681.1
SIO_010081: DIAPH2
subclass of: SO_0000673
so part of: DIAPH2
location: complement(join(1560280..1560344,1606361..1606456,1615901..1616036,1623953..1624117,1640167..1640291,1650947..1651076,1655479..1655718,1661692..1661793,1663567..1663661,1665116..1665217,1683395..1683509,1685910..1686578,1688186..1688290,1688907..1688971,1689259..1689377,1689921..1690037,1690972..1691090,1692251..1692361,1694651..1694762,1695539..1695675,1696645..1696714,1696795..1696869,1697252..1697391,1701485..1701505,1705033..1705137,1705987..1706163,1723828..1724035))
location: region:1560280-1724035:-1
so has part: feature:1723828-1724035:-1:exon
so has part: feature:1705987-1706163:-1:exon
so has part: feature:1705033-1705137:-1:exon
so has part: feature:1701485-1701505:-1:exon
so has part: feature:1697252-1697391:-1:exon
so has part: feature:1696795-1696869:-1:exon
so has part: feature:1696645-1696714:-1:exon
so has part: feature:1695539-1695675:-1:exon
so has part: feature:1694651-1694762:-1:exon
so has part: feature:1692251-1692361:-1:exon
so has part: feature:1690972-1691090:-1:exon
so has part: feature:1689921-1690037:-1:exon
so has part: feature:1689259-1689377:-1:exon
so has part: feature:1688907-1688971:-1:exon
so has part: feature:1688186-1688290:-1:exon
so has part: feature:1685910-1686578:-1:exon
so has part: feature:1683395-1683509:-1:exon
so has part: feature:1665116-1665217:-1:exon
so has part: feature:1663567-1663661:-1:exon
so has part: feature:1661692-1661793:-1:exon
so has part: feature:1655479-1655718:-1:exon
so has part: feature:1650947-1651076:-1:exon
so has part: feature:1640167-1640291:-1:exon
so has part: feature:1623953-1624117:-1:exon
so has part: feature:1615901-1616036:-1:exon
so has part: feature:1606361-1606456:-1:exon
so has part: feature:1560280-1560344:-1:exon

position:1560280:-1
position: 1560280
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1723828-1724035:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1705987-1706163:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1705033-1705137:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1701485-1701505:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1697252-1697391:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1696795-1696869:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1696645-1696714:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1695539-1695675:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1694651-1694762:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1692251-1692361:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1690972-1691090:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1689921-1690037:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1689259-1689377:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1688907-1688971:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1688186-1688290:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1685910-1686578:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1683395-1683509:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:1665116-1665217:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:1663567-1663661:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:1661692-1661793:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:1655479-1655718:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:1650947-1651076:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:1640167-1640291:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:1623953-1624117:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:1615901-1616036:-1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:1606361-1606456:-1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:1560280-1560344:-1:exon

DIAPH2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 87175
gene: DIAPH2
product: diaphanous related formin 2, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XM_030967680.1
SIO_010081: DIAPH2
subclass of: SO_0000673
so part of: DIAPH2
location: complement(join(1560280..1560344,1606361..1606456,1615901..1616036,1623953..1624117,1640167..1640291,1650947..1651076,1655479..1655718,1661692..1661793,1663567..1663661,1665116..1665217,1683395..1683509,1685910..1686578,1688186..1688290,1688907..1688971,1689259..1689377,1689921..1690037,1690972..1691090,1692251..1692361,1694651..1694762,1695539..1695675,1696645..1696714,1696795..1696869,1697252..1697391,1705033..1705137,1705987..1706163,1708408..1708440,1723828..1724035))
location: region:1560280-1724035:-1
so has part: feature:1723828-1724035:-1:exon
so has part: feature:1708408-1708440:-1:exon
so has part: feature:1705987-1706163:-1:exon
so has part: feature:1705033-1705137:-1:exon
so has part: feature:1697252-1697391:-1:exon
so has part: feature:1696795-1696869:-1:exon
so has part: feature:1696645-1696714:-1:exon
so has part: feature:1695539-1695675:-1:exon
so has part: feature:1694651-1694762:-1:exon
so has part: feature:1692251-1692361:-1:exon
so has part: feature:1690972-1691090:-1:exon
so has part: feature:1689921-1690037:-1:exon
so has part: feature:1689259-1689377:-1:exon
so has part: feature:1688907-1688971:-1:exon
so has part: feature:1688186-1688290:-1:exon
so has part: feature:1685910-1686578:-1:exon
so has part: feature:1683395-1683509:-1:exon
so has part: feature:1665116-1665217:-1:exon
so has part: feature:1663567-1663661:-1:exon
so has part: feature:1661692-1661793:-1:exon
so has part: feature:1655479-1655718:-1:exon
so has part: feature:1650947-1651076:-1:exon
so has part: feature:1640167-1640291:-1:exon
so has part: feature:1623953-1624117:-1:exon
so has part: feature:1615901-1616036:-1:exon
so has part: feature:1606361-1606456:-1:exon
so has part: feature:1560280-1560344:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1723828-1724035:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1708408-1708440:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1705987-1706163:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1705033-1705137:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1697252-1697391:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1696795-1696869:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1696645-1696714:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1695539-1695675:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1694651-1694762:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1692251-1692361:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1690972-1691090:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1689921-1690037:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1689259-1689377:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1688907-1688971:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1688186-1688290:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1685910-1686578:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1683395-1683509:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:1665116-1665217:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:1663567-1663661:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:1661692-1661793:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:1655479-1655718:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:1650947-1651076:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:1640167-1640291:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:1623953-1624117:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:1615901-1616036:-1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:1606361-1606456:-1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:1560280-1560344:-1:exon

DIAPH2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 87175
gene: DIAPH2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protein diaphanous homolog 2 isoform X3
translation: MDGHAAPGAGGEEPLSSGRMNAKRGGRAAEEESRNKPKLRDRITSFRKSAVKKEKPLIQHPIDSQPSISEIPHAQALVDERCMNLSEKEVMDLFEKMMEDMNLNEERKAPLRDKDLSTKREMVVQYISATAKSIVGSKVPGGLKNSKHECTLSSQEYIHELRSGISDEKLLNCLESLRVSLTSNPVSWVNNFGHEGLGLLLDALEKLLDKKQQESIDKKNQHKLIQCLKAFMNNKYGLQRILGDERSLLLLSRAIDPKQPHMMTETVKILSAICIVGEENILDKLLGAITTAAERHNREERFSQIVEGLENHEFIQLQVACMQLINALVTSPEDLDFRIHLRNEFLRCGLKKILPALKDKENEELDIQLRVFDENKDEDHFELSHRLNDIKAEMDDVSEVFHLLYNMVKDTSSENYFLSILQHFLLIRNDYYVRPQYYKIIEECVSQIVLHCSGMDPDFKYRGRMDINFTHLVDACVDKAKVEESEKKAAEFSRKFDEEFTARQEAQAELQKREEKIKELESEVKQLRTQGPGLTEVPAIPPAHPSENVPPSPAPSLPGGAIPPPPPLPGAGAIPPPPPLPGGVTIPPPPPLPGGVTIPPPPPLPGGVTIPPPPPLPGGVTIPPPPPLPGGAAIPPPPPLPGASLPPPPPPLPGAAIPPPPPLPGVPPPPPLPGGAGPPPPPPLPGGAGPPPPPPLPGGAIPPPPPFGGPPMPPPLGGAPFAPFPVVPALPHGMKEKKKYKLEVSMKRINWSKIEPQEIGENSFWVKAEEDKFEDPELFAKLALTFGTQMKAKKPVEESEEKKAAQSKKKIKELRVLDGKSAQNLSIFLGSFRLPYEEIKNIILEVDEEKLSESLIQNLVKNLPEQKELNALAELKDEYNDLAEPEQFGVVMSSVKMLRARLNGILFRLMFEEHVNNIKPDIMAVTLACEELKKSESFSKLLELVLFLGNYMNSGSRNAQSLGFNISFLCKIRDTKSSDQKTTLLHFLAEICEENYRDILKFPDELQHVESASKVSAQTLKSNLDSMNQQIQRLEKDIENFPKSQDEHDKFVEKMSSFAESAREQYEKLSNMHNNMTKLYENLGEYFTFDPKTISIEEFFGDLSNFRTLFLEALKENNKRRELEEKTKRAKLAKEKAERERLERQKKKQQLIDMNKEGDETGVMDSLLEALQSGAAFRDRRKRTPRAQDNKRVTLERSRSRHNGAIAAV
SIO_010081: DIAPH2
subclass of: SO_0000673
so part of: DIAPH2
location: complement(join(1560280..1560344,1606361..1606456,1615901..1616036,1623953..1624117,1640167..1640291,1650947..1651076,1655479..1655718,1661692..1661793,1663567..1663661,1665116..1665217,1683395..1683509,1685910..1686578,1688186..1688290,1688907..1688971,1689259..1689377,1689921..1690037,1690972..1691090,1692251..1692361,1694651..1694762,1695539..1695675,1696645..1696714,1696795..1696869,1697252..1697391,1701485..1701505,1705033..1705137,1705987..1706163,1723828..1723944))
location: region:1560280-1723944:-1
so has part: feature:1723828-1723944:-1:exon
so has part: feature:1705987-1706163:-1:exon
so has part: feature:1705033-1705137:-1:exon
so has part: feature:1701485-1701505:-1:exon
so has part: feature:1697252-1697391:-1:exon
so has part: feature:1696795-1696869:-1:exon
so has part: feature:1696645-1696714:-1:exon
so has part: feature:1695539-1695675:-1:exon
so has part: feature:1694651-1694762:-1:exon
so has part: feature:1692251-1692361:-1:exon
so has part: feature:1690972-1691090:-1:exon
so has part: feature:1689921-1690037:-1:exon
so has part: feature:1689259-1689377:-1:exon
so has part: feature:1688907-1688971:-1:exon
so has part: feature:1688186-1688290:-1:exon
so has part: feature:1685910-1686578:-1:exon
so has part: feature:1683395-1683509:-1:exon
so has part: feature:1665116-1665217:-1:exon
so has part: feature:1663567-1663661:-1:exon
so has part: feature:1661692-1661793:-1:exon
so has part: feature:1655479-1655718:-1:exon
so has part: feature:1650947-1651076:-1:exon
so has part: feature:1640167-1640291:-1:exon
so has part: feature:1623953-1624117:-1:exon
so has part: feature:1615901-1616036:-1:exon
so has part: feature:1606361-1606456:-1:exon
so has part: feature:1560280-1560344:-1:exon

XP_030823541.1
type: Protein
SIO_000068: ncbiprotein

position:1723944:-1
position: 1723944
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1723828-1723944:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1705987-1706163:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1705033-1705137:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1701485-1701505:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1697252-1697391:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1696795-1696869:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1696645-1696714:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1695539-1695675:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1694651-1694762:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1692251-1692361:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1690972-1691090:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1689921-1690037:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1689259-1689377:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1688907-1688971:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1688186-1688290:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1685910-1686578:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1683395-1683509:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:1665116-1665217:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:1663567-1663661:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:1661692-1661793:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:1655479-1655718:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:1650947-1651076:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:1640167-1640291:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:1623953-1624117:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:1615901-1616036:-1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:1606361-1606456:-1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:1560280-1560344:-1:exon

DIAPH2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 87175
gene: DIAPH2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protein diaphanous homolog 2 isoform X2
translation: MDGHAAPGAGGEEPLSSGRMNAKRGGRAAEEESRNKPKLNIQIKTLADDVRDRITSFRKSAVKKEKPLIQHPIDSQPSISEIPHAQALVDERCMNLSEKEVMDLFEKMMEDMNLNEERKAPLRDKDLSTKREMVVQYISATAKSGGLKNSKHECTLSSQEYIHELRSGISDEKLLNCLESLRVSLTSNPVSWVNNFGHEGLGLLLDALEKLLDKKQQESIDKKNQHKLIQCLKAFMNNKYGLQRILGDERSLLLLSRAIDPKQPHMMTETVKILSAICIVGEENILDKLLGAITTAAERHNREERFSQIVEGLENHEFIQLQVACMQLINALVTSPEDLDFRIHLRNEFLRCGLKKILPALKDKENEELDIQLRVFDENKDEDHFELSHRLNDIKAEMDDVSEVFHLLYNMVKDTSSENYFLSILQHFLLIRNDYYVRPQYYKIIEECVSQIVLHCSGMDPDFKYRGRMDINFTHLVDACVDKAKVEESEKKAAEFSRKFDEEFTARQEAQAELQKREEKIKELESEVKQLRTQGPGLTEVPAIPPAHPSENVPPSPAPSLPGGAIPPPPPLPGAGAIPPPPPLPGGVTIPPPPPLPGGVTIPPPPPLPGGVTIPPPPPLPGGVTIPPPPPLPGGAAIPPPPPLPGASLPPPPPPLPGAAIPPPPPLPGVPPPPPLPGGAGPPPPPPLPGGAGPPPPPPLPGGAIPPPPPFGGPPMPPPLGGAPFAPFPVVPALPHGMKEKKKYKLEVSMKRINWSKIEPQEIGENSFWVKAEEDKFEDPELFAKLALTFGTQMKAKKPVEESEEKKAAQSKKKIKELRVLDGKSAQNLSIFLGSFRLPYEEIKNIILEVDEEKLSESLIQNLVKNLPEQKELNALAELKDEYNDLAEPEQFGVVMSSVKMLRARLNGILFRLMFEEHVNNIKPDIMAVTLACEELKKSESFSKLLELVLFLGNYMNSGSRNAQSLGFNISFLCKIRDTKSSDQKTTLLHFLAEICEENYRDILKFPDELQHVESASKVSAQTLKSNLDSMNQQIQRLEKDIENFPKSQDEHDKFVEKMSSFAESAREQYEKLSNMHNNMTKLYENLGEYFTFDPKTISIEEFFGDLSNFRTLFLEALKENNKRRELEEKTKRAKLAKEKAERERLERQKKKQQLIDMNKEGDETGVMDSLLEALQSGAAFRDRRKRTPRAQDNKRVTLERSRSRHNGAIAAV
SIO_010081: DIAPH2
subclass of: SO_0000673
so part of: DIAPH2
location: complement(join(1560280..1560344,1606361..1606456,1615901..1616036,1623953..1624117,1640167..1640291,1650947..1651076,1655479..1655718,1661692..1661793,1663567..1663661,1665116..1665217,1683395..1683509,1685910..1686578,1688186..1688290,1688907..1688971,1689259..1689377,1689921..1690037,1690972..1691090,1692251..1692361,1694651..1694762,1695539..1695675,1696645..1696714,1696795..1696869,1697252..1697391,1705033..1705137,1705987..1706163,1708408..1708440,1723828..1723944))
location: region:1560280-1723944:-1
so has part: feature:1723828-1723944:-1:exon
so has part: feature:1708408-1708440:-1:exon
so has part: feature:1705987-1706163:-1:exon
so has part: feature:1705033-1705137:-1:exon
so has part: feature:1697252-1697391:-1:exon
so has part: feature:1696795-1696869:-1:exon
so has part: feature:1696645-1696714:-1:exon
so has part: feature:1695539-1695675:-1:exon
so has part: feature:1694651-1694762:-1:exon
so has part: feature:1692251-1692361:-1:exon
so has part: feature:1690972-1691090:-1:exon
so has part: feature:1689921-1690037:-1:exon
so has part: feature:1689259-1689377:-1:exon
so has part: feature:1688907-1688971:-1:exon
so has part: feature:1688186-1688290:-1:exon
so has part: feature:1685910-1686578:-1:exon
so has part: feature:1683395-1683509:-1:exon
so has part: feature:1665116-1665217:-1:exon
so has part: feature:1663567-1663661:-1:exon
so has part: feature:1661692-1661793:-1:exon
so has part: feature:1655479-1655718:-1:exon
so has part: feature:1650947-1651076:-1:exon
so has part: feature:1640167-1640291:-1:exon
so has part: feature:1623953-1624117:-1:exon
so has part: feature:1615901-1616036:-1:exon
so has part: feature:1606361-1606456:-1:exon
so has part: feature:1560280-1560344:-1:exon

XP_030823540.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1723828-1723944:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1708408-1708440:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1705987-1706163:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1705033-1705137:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1697252-1697391:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1696795-1696869:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1696645-1696714:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1695539-1695675:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1694651-1694762:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1692251-1692361:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1690972-1691090:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1689921-1690037:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1689259-1689377:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1688907-1688971:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1688186-1688290:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1685910-1686578:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1683395-1683509:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:1665116-1665217:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:1663567-1663661:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:1661692-1661793:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:1655479-1655718:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:1650947-1651076:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:1640167-1640291:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:1623953-1624117:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:1615901-1616036:-1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:1606361-1606456:-1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:1560280-1560344:-1:exon

DIAPH2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 87175
gene: DIAPH2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protein diaphanous homolog 2 isoform X1
translation: MDGHAAPGAGGEEPLSSGRMNAKRGGRAAEEESRNKPKLNIQIKTLADDVRDRITSFRKSAVKKEKPLIQHPIDSQPSISEIPHAQALVDERCMNLSEKEVMDLFEKMMEDMNLNEERKAPLRDKDLSTKREMVVQYISATAKSIVGSKVPGGLKNSKHECTLSSQEYIHELRSGISDEKLLNCLESLRVSLTSNPVSWVNNFGHEGLGLLLDALEKLLDKKQQESIDKKNQHKLIQCLKAFMNNKYGLQRILGDERSLLLLSRAIDPKQPHMMTETVKILSAICIVGEENILDKLLGAITTAAERHNREERFSQIVEGLENHEFIQLQVACMQLINALVTSPEDLDFRIHLRNEFLRCGLKKILPALKDKENEELDIQLRVFDENKDEDHFELSHRLNDIKAEMDDVSEVFHLLYNMVKDTSSENYFLSILQHFLLIRNDYYVRPQYYKIIEECVSQIVLHCSGMDPDFKYRGRMDINFTHLVDACVDKAKVEESEKKAAEFSRKFDEEFTARQEAQAELQKREEKIKELESEVKQLRTQGPGLTEVPAIPPAHPSENVPPSPAPSLPGGAIPPPPPLPGAGAIPPPPPLPGGVTIPPPPPLPGGVTIPPPPPLPGGVTIPPPPPLPGGVTIPPPPPLPGGAAIPPPPPLPGASLPPPPPPLPGAAIPPPPPLPGVPPPPPLPGGAGPPPPPPLPGGAGPPPPPPLPGGAIPPPPPFGGPPMPPPLGGAPFAPFPVVPALPHGMKEKKKYKLEVSMKRINWSKIEPQEIGENSFWVKAEEDKFEDPELFAKLALTFGTQMKAKKPVEESEEKKAAQSKKKIKELRVLDGKSAQNLSIFLGSFRLPYEEIKNIILEVDEEKLSESLIQNLVKNLPEQKELNALAELKDEYNDLAEPEQFGVVMSSVKMLRARLNGILFRLMFEEHVNNIKPDIMAVTLACEELKKSESFSKLLELVLFLGNYMNSGSRNAQSLGFNISFLCKIRDTKSSDQKTTLLHFLAEICEENYRDILKFPDELQHVESASKVSAQTLKSNLDSMNQQIQRLEKDIENFPKSQDEHDKFVEKMSSFAESAREQYEKLSNMHNNMTKLYENLGEYFTFDPKTISIEEFFGDLSNFRTLFLEALKENNKRRELEEKTKRAKLAKEKAERERLERQKKKQQLIDMNKEGDETGVMDSLLEALQSGAAFRDRRKRTPRAQDNKRVTLERSRSRHNGAIAAV
SIO_010081: DIAPH2
subclass of: SO_0000673
so part of: DIAPH2
location: complement(join(1560280..1560344,1606361..1606456,1615901..1616036,1623953..1624117,1640167..1640291,1650947..1651076,1655479..1655718,1661692..1661793,1663567..1663661,1665116..1665217,1683395..1683509,1685910..1686578,1688186..1688290,1688907..1688971,1689259..1689377,1689921..1690037,1690972..1691090,1692251..1692361,1694651..1694762,1695539..1695675,1696645..1696714,1696795..1696869,1697252..1697391,1701485..1701505,1705033..1705137,1705987..1706163,1708408..1708440,1723828..1723944))
location: region:1560280-1723944:-1
so has part: feature:1723828-1723944:-1:exon
so has part: feature:1708408-1708440:-1:exon
so has part: feature:1705987-1706163:-1:exon
so has part: feature:1705033-1705137:-1:exon
so has part: feature:1701485-1701505:-1:exon
so has part: feature:1697252-1697391:-1:exon
so has part: feature:1696795-1696869:-1:exon
so has part: feature:1696645-1696714:-1:exon
so has part: feature:1695539-1695675:-1:exon
so has part: feature:1694651-1694762:-1:exon
so has part: feature:1692251-1692361:-1:exon
so has part: feature:1690972-1691090:-1:exon
so has part: feature:1689921-1690037:-1:exon
so has part: feature:1689259-1689377:-1:exon
so has part: feature:1688907-1688971:-1:exon
so has part: feature:1688186-1688290:-1:exon
so has part: feature:1685910-1686578:-1:exon
so has part: feature:1683395-1683509:-1:exon
so has part: feature:1665116-1665217:-1:exon
so has part: feature:1663567-1663661:-1:exon
so has part: feature:1661692-1661793:-1:exon
so has part: feature:1655479-1655718:-1:exon
so has part: feature:1650947-1651076:-1:exon
so has part: feature:1640167-1640291:-1:exon
so has part: feature:1623953-1624117:-1:exon
so has part: feature:1615901-1616036:-1:exon
so has part: feature:1606361-1606456:-1:exon
so has part: feature:1560280-1560344:-1:exon

XP_030823539.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1723828-1723944:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1708408-1708440:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1705987-1706163:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1705033-1705137:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1701485-1701505:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1697252-1697391:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1696795-1696869:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1696645-1696714:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1695539-1695675:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1694651-1694762:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1692251-1692361:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1690972-1691090:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1689921-1690037:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1689259-1689377:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1688907-1688971:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1688186-1688290:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1685910-1686578:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:1683395-1683509:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:1665116-1665217:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:1663567-1663661:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:1661692-1661793:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:1655479-1655718:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:1650947-1651076:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:1640167-1640291:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:1623953-1624117:-1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:1615901-1616036:-1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:1606361-1606456:-1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:1560280-1560344:-1:exon

DIAPH2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 87175
gene: DIAPH2
product: diaphanous related formin 2, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_030967682.1
SIO_010081: DIAPH2
subclass of: SO_0000673
so part of: DIAPH2
location: complement(join(1560280..1560344,1606361..1606456,1615901..1616036,1623953..1624117,1640167..1640291,1650947..1651076,1655479..1655718,1661692..1661793,1663567..1663661,1665116..1665217,1683395..1683509,1685910..1686578,1688186..1688290,1688907..1688971,1689259..1689377,1689921..1690037,1690972..1691090,1692251..1692361,1694651..1694762,1695539..1695675,1696645..1696714,1696795..1696869,1697252..1697391,1701485..1701505,1705033..1705137,1705987..1706163,1708376..1708431))
location: region:1560280-1708431:-1
so has part: feature:1708376-1708431:-1:exon
so has part: feature:1705987-1706163:-1:exon
so has part: feature:1705033-1705137:-1:exon
so has part: feature:1701485-1701505:-1:exon
so has part: feature:1697252-1697391:-1:exon
so has part: feature:1696795-1696869:-1:exon
so has part: feature:1696645-1696714:-1:exon
so has part: feature:1695539-1695675:-1:exon
so has part: feature:1694651-1694762:-1:exon
so has part: feature:1692251-1692361:-1:exon
so has part: feature:1690972-1691090:-1:exon
so has part: feature:1689921-1690037:-1:exon
so has part: feature:1689259-1689377:-1:exon
so has part: feature:1688907-1688971:-1:exon
so has part: feature:1688186-1688290:-1:exon
so has part: feature:1685910-1686578:-1:exon
so has part: feature:1683395-1683509:-1:exon
so has part: feature:1665116-1665217:-1:exon
so has part: feature:1663567-1663661:-1:exon
so has part: feature:1661692-1661793:-1:exon
so has part: feature:1655479-1655718:-1:exon
so has part: feature:1650947-1651076:-1:exon
so has part: feature:1640167-1640291:-1:exon
so has part: feature:1623953-1624117:-1:exon
so has part: feature:1615901-1616036:-1:exon
so has part: feature:1606361-1606456:-1:exon
so has part: feature:1560280-1560344:-1:exon

position:1708431:-1
position: 1708431
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1708376-1708431:-1:exon

position:1708376:-1
position: 1708376
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1705987-1706163:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1705033-1705137:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1701485-1701505:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1697252-1697391:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1696795-1696869:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1696645-1696714:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1695539-1695675:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1694651-1694762:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1692251-1692361:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1690972-1691090:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1689921-1690037:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1689259-1689377:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1688907-1688971:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1688186-1688290:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1685910-1686578:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1683395-1683509:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:1665116-1665217:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:1663567-1663661:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:1661692-1661793:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:1655479-1655718:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:1650947-1651076:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:1640167-1640291:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:1623953-1624117:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:1615901-1616036:-1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:1606361-1606456:-1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:1560280-1560344:-1:exon

DIAPH2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 87175
gene: DIAPH2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protein diaphanous homolog 2 isoform X4
translation: MRDRITSFRKSAVKKEKPLIQHPIDSQPSISEIPHAQALVDERCMNLSEKEVMDLFEKMMEDMNLNEERKAPLRDKDLSTKREMVVQYISATAKSIVGSKVPGGLKNSKHECTLSSQEYIHELRSGISDEKLLNCLESLRVSLTSNPVSWVNNFGHEGLGLLLDALEKLLDKKQQESIDKKNQHKLIQCLKAFMNNKYGLQRILGDERSLLLLSRAIDPKQPHMMTETVKILSAICIVGEENILDKLLGAITTAAERHNREERFSQIVEGLENHEFIQLQVACMQLINALVTSPEDLDFRIHLRNEFLRCGLKKILPALKDKENEELDIQLRVFDENKDEDHFELSHRLNDIKAEMDDVSEVFHLLYNMVKDTSSENYFLSILQHFLLIRNDYYVRPQYYKIIEECVSQIVLHCSGMDPDFKYRGRMDINFTHLVDACVDKAKVEESEKKAAEFSRKFDEEFTARQEAQAELQKREEKIKELESEVKQLRTQGPGLTEVPAIPPAHPSENVPPSPAPSLPGGAIPPPPPLPGAGAIPPPPPLPGGVTIPPPPPLPGGVTIPPPPPLPGGVTIPPPPPLPGGVTIPPPPPLPGGAAIPPPPPLPGASLPPPPPPLPGAAIPPPPPLPGVPPPPPLPGGAGPPPPPPLPGGAGPPPPPPLPGGAIPPPPPFGGPPMPPPLGGAPFAPFPVVPALPHGMKEKKKYKLEVSMKRINWSKIEPQEIGENSFWVKAEEDKFEDPELFAKLALTFGTQMKAKKPVEESEEKKAAQSKKKIKELRVLDGKSAQNLSIFLGSFRLPYEEIKNIILEVDEEKLSESLIQNLVKNLPEQKELNALAELKDEYNDLAEPEQFGVVMSSVKMLRARLNGILFRLMFEEHVNNIKPDIMAVTLACEELKKSESFSKLLELVLFLGNYMNSGSRNAQSLGFNISFLCKIRDTKSSDQKTTLLHFLAEICEENYRDILKFPDELQHVESASKVSAQTLKSNLDSMNQQIQRLEKDIENFPKSQDEHDKFVEKMSSFAESAREQYEKLSNMHNNMTKLYENLGEYFTFDPKTISIEEFFGDLSNFRTLFLEALKENNKRRELEEKTKRAKLAKEKAERERLERQKKKQQLIDMNKEGDETGVMDSLLEALQSGAAFRDRRKRTPRAQDNKRVTLERSRSRHNGAIAAV
SIO_010081: DIAPH2
subclass of: SO_0000673
so part of: DIAPH2
location: complement(join(1560280..1560344,1606361..1606456,1615901..1616036,1623953..1624117,1640167..1640291,1650947..1651076,1655479..1655718,1661692..1661793,1663567..1663661,1665116..1665217,1683395..1683509,1685910..1686578,1688186..1688290,1688907..1688971,1689259..1689377,1689921..1690037,1690972..1691090,1692251..1692361,1694651..1694762,1695539..1695675,1696645..1696714,1696795..1696869,1697252..1697391,1701485..1701505,1705033..1705137,1705987..1706163,1708376..1708378))
location: region:1560280-1708378:-1
so has part: feature:1708376-1708378:-1:exon
so has part: feature:1705987-1706163:-1:exon
so has part: feature:1705033-1705137:-1:exon
so has part: feature:1701485-1701505:-1:exon
so has part: feature:1697252-1697391:-1:exon
so has part: feature:1696795-1696869:-1:exon
so has part: feature:1696645-1696714:-1:exon
so has part: feature:1695539-1695675:-1:exon
so has part: feature:1694651-1694762:-1:exon
so has part: feature:1692251-1692361:-1:exon
so has part: feature:1690972-1691090:-1:exon
so has part: feature:1689921-1690037:-1:exon
so has part: feature:1689259-1689377:-1:exon
so has part: feature:1688907-1688971:-1:exon
so has part: feature:1688186-1688290:-1:exon
so has part: feature:1685910-1686578:-1:exon
so has part: feature:1683395-1683509:-1:exon
so has part: feature:1665116-1665217:-1:exon
so has part: feature:1663567-1663661:-1:exon
so has part: feature:1661692-1661793:-1:exon
so has part: feature:1655479-1655718:-1:exon
so has part: feature:1650947-1651076:-1:exon
so has part: feature:1640167-1640291:-1:exon
so has part: feature:1623953-1624117:-1:exon
so has part: feature:1615901-1616036:-1:exon
so has part: feature:1606361-1606456:-1:exon
so has part: feature:1560280-1560344:-1:exon

XP_030823542.1
type: Protein
SIO_000068: ncbiprotein

position:1708378:-1
position: 1708378
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1708376-1708378:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1705987-1706163:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1705033-1705137:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1701485-1701505:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1697252-1697391:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1696795-1696869:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1696645-1696714:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1695539-1695675:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1694651-1694762:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1692251-1692361:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1690972-1691090:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1689921-1690037:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1689259-1689377:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1688907-1688971:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1688186-1688290:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1685910-1686578:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1683395-1683509:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:1665116-1665217:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:1663567-1663661:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:1661692-1661793:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:1655479-1655718:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:1650947-1651076:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:1640167-1640291:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:1623953-1624117:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:1615901-1616036:-1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:1606361-1606456:-1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:1560280-1560344:-1:exon

PCDH11X
type: Gene
subclass of: SO_0000704
RO_0002162: 87175
gene: PCDH11X
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(2241352..2662062)
location: region:2241352-2662062:-1
so has part: feature:2241352-2662062:-1:exon
subclass of: SO_0000010

115915009
type: Gene
SIO_000068: ncbigene

position:2241352:-1
position: 2241352
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2662062:-1
position: 2662062
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2241352-2662062:-1:exon

PCDH11X
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 87175
gene: PCDH11X
product: protocadherin 11 X-linked, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 ESTs, 10 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XM_030967927.1
SIO_010081: PCDH11X
subclass of: SO_0000673
so part of: PCDH11X
location: complement(join(2241352..2245986,2362252..2362450,2467993..2468064,2591179..2593665,2617100..2617683,2661572..2662062))
location: region:2241352-2662062:-1
so has part: feature:2661572-2662062:-1:exon
so has part: feature:2617100-2617683:-1:exon
so has part: feature:2591179-2593665:-1:exon
so has part: feature:2467993-2468064:-1:exon
so has part: feature:2362252-2362450:-1:exon
so has part: feature:2241352-2245986:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2661572-2662062:-1:exon

position:2661572:-1
position: 2661572
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2617100-2617683:-1:exon

position:2617100:-1
position: 2617100
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2617683:-1
position: 2617683
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2591179-2593665:-1:exon

position:2591179:-1
position: 2591179
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2593665:-1
position: 2593665
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:2467993-2468064:-1:exon

position:2467993:-1
position: 2467993
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2468064:-1
position: 2468064
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:2362252-2362450:-1:exon

position:2362252:-1
position: 2362252
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2362450:-1
position: 2362450
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:2241352-2245986:-1:exon

position:2245986:-1
position: 2245986
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

PCDH11X
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 87175
gene: PCDH11X
product: protocadherin 11 X-linked, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 3 ESTs, 8 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XM_030967925.1
SIO_010081: PCDH11X
subclass of: SO_0000673
so part of: PCDH11X
location: complement(join(2241352..2245986,2362252..2362450,2467993..2468064,2591179..2593665,2596767..2596814,2617100..2617683,2661572..2662062))
location: region:2241352-2662062:-1
so has part: feature:2661572-2662062:-1:exon
so has part: feature:2617100-2617683:-1:exon
so has part: feature:2596767-2596814:-1:exon
so has part: feature:2591179-2593665:-1:exon
so has part: feature:2467993-2468064:-1:exon
so has part: feature:2362252-2362450:-1:exon
so has part: feature:2241352-2245986:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2661572-2662062:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2617100-2617683:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2596767-2596814:-1:exon

position:2596767:-1
position: 2596767
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2596814:-1
position: 2596814
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:2591179-2593665:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2467993-2468064:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2362252-2362450:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2241352-2245986:-1:exon

PCDH11X
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 87175
gene: PCDH11X
product: protocadherin 11 X-linked, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 3 ESTs, 8 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_030967926.1
SIO_010081: PCDH11X
subclass of: SO_0000673
so part of: PCDH11X
location: complement(join(2241352..2245986,2362252..2362450,2467993..2468064,2591179..2593665,2596767..2596814,2617100..2617683,2660132..2660581,2661572..2662062))
location: region:2241352-2662062:-1
so has part: feature:2661572-2662062:-1:exon
so has part: feature:2660132-2660581:-1:exon
so has part: feature:2617100-2617683:-1:exon
so has part: feature:2596767-2596814:-1:exon
so has part: feature:2591179-2593665:-1:exon
so has part: feature:2467993-2468064:-1:exon
so has part: feature:2362252-2362450:-1:exon
so has part: feature:2241352-2245986:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2661572-2662062:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2660132-2660581:-1:exon

position:2660132:-1
position: 2660132
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2660581:-1
position: 2660581
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2617100-2617683:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2596767-2596814:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2591179-2593665:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2467993-2468064:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2362252-2362450:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2241352-2245986:-1:exon

PCDH11X
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 87175
gene: PCDH11X
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protocadherin-11 X-linked isoform X2
translation: MDLLSGTYLLAVLLACIVFQSGAQEKNYTVREELPENVLIGNLLKDLNLTLDPDVPLSSPLQFKLVYKTGDVPLVRVEENTGEIFTAANRIDREKLCAGIFSENRCFYEVEVAVLPDEVFRLVKIRFLIEDINDNAPLFPSTVINISIPENTAINSRYSVPSAIDPDIGVNGIQHYELLKGQNVFGLDITETPEGDKWPQLIVQQILDREQKDTYVMKIKVEDGGSPPRSSTAILQVTVTDVNDNRPVFKENDIEVSVPENAPVGTSVSQLHATDADLGSNAQIHFYFSNQISSLAKRLFAIDNTTGLITIREPLDREESPVHKLTVLASDGSSTPSRATVTVNVTDINDNVPSIDTRYIINPVNGTVLLSEKAPLNTKIALITVMDKDADQNGKVTCFTDHDVPFRLKPVFDNQFLLETATFLDYEATREYAIKIVASDSGKPPLNQSAMLLIKIKDENDNAPVFTQPIIGLSIPENNAPGTQLTKISATDADSGRNAEISYILGPDAPPIFNLDRRTGILTAVRKLDREKQDRYSFTVLAKDNGMPPLQTNATVTVSVLDQNDNSPAFTHNEYNFYVPENLPMYGTVGLITVTDADAGDNAAVTLSILNGRDNFIIDPLTGVIRPNITFDREQQGSYTFQVKAVDGGRLQRSSTAKVTINVVDVNDNRPVFVIPSSNYSYELVPTSASPGSVVTKVFAVDNDTGMNAELRYSIIGGNSRGLFTIDQLTGNITLKEKVITSDHGLHRLVIKVNDLGQPESLYTIALVHLFVNETVTNSSYVQELVRRNMETPVGQNIGDGEITPQTNDYVKIIIAIIAGTMTVILVIFVTALVRCRQTPRHKVVQKNKQSGEWVSPNQENRQIKKKKKKKKRSPKSLLLNFVTIEESKPDDPGHEHINGTLDIPVELEEQTMGKYNWATTPTTFKPDSPDLAKHYKSASPQPTFQIKPETPVPPKKHHVIQELPLDNTFVVGCDSLSKCSSSSSDPYSVSECSCQGGFKTPGPIHTRQHTKEVGRPQTPLKETTLEPWTQPQPQRRVTFHLPDGSQESCSDSGLGDHEPSSGASASHPLPLGFPQDEFYEQASPNSRTEGDGNSDPESTIEVNLQKALAEASENCTQECLILGHSDNCWMPPALTQFQQPNPSLPSFGFQQGWGRGARPEGRHTLGRPLPKDDSDKGQAGPRPQFYNTCERHCATEDPVKVIPLANFAASHPAPGAGSSSTFIHEHQL
SIO_010081: PCDH11X
subclass of: SO_0000673
so part of: PCDH11X
location: complement(join(2245595..2245986,2362252..2362450,2467993..2468064,2591179..2593665,2617100..2617639))
location: region:2245595-2617639:-1
so has part: feature:2617100-2617639:-1:exon
so has part: feature:2591179-2593665:-1:exon
so has part: feature:2467993-2468064:-1:exon
so has part: feature:2362252-2362450:-1:exon
so has part: feature:2245595-2245986:-1:exon

XP_030823787.1
type: Protein
SIO_000068: ncbiprotein

position:2245595:-1
position: 2245595
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2617639:-1
position: 2617639
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2617100-2617639:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2591179-2593665:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2467993-2468064:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2362252-2362450:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2245595-2245986:-1:exon

PCDH11X
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 87175
gene: PCDH11X
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protocadherin-11 X-linked isoform X1
translation: MDLLSGTYLLAVLLACIVFQSGAQEKNYTVREELPENVLIGNLLKDLNLTLDPDVPLSSPLQFKLVYKTGDVPLVRVEENTGEIFTAANRIDREKLCAGIFSENRCFYEVEVAVLPDEVFRLVKIRFLIEDINDNAPLFPSTVINISIPENTAINSRYSVPSAIDPDIGVNGIQHYELLKPKTAPKRTFGSITNDQGQNVFGLDITETPEGDKWPQLIVQQILDREQKDTYVMKIKVEDGGSPPRSSTAILQVTVTDVNDNRPVFKENDIEVSVPENAPVGTSVSQLHATDADLGSNAQIHFYFSNQISSLAKRLFAIDNTTGLITIREPLDREESPVHKLTVLASDGSSTPSRATVTVNVTDINDNVPSIDTRYIINPVNGTVLLSEKAPLNTKIALITVMDKDADQNGKVTCFTDHDVPFRLKPVFDNQFLLETATFLDYEATREYAIKIVASDSGKPPLNQSAMLLIKIKDENDNAPVFTQPIIGLSIPENNAPGTQLTKISATDADSGRNAEISYILGPDAPPIFNLDRRTGILTAVRKLDREKQDRYSFTVLAKDNGMPPLQTNATVTVSVLDQNDNSPAFTHNEYNFYVPENLPMYGTVGLITVTDADAGDNAAVTLSILNGRDNFIIDPLTGVIRPNITFDREQQGSYTFQVKAVDGGRLQRSSTAKVTINVVDVNDNRPVFVIPSSNYSYELVPTSASPGSVVTKVFAVDNDTGMNAELRYSIIGGNSRGLFTIDQLTGNITLKEKVITSDHGLHRLVIKVNDLGQPESLYTIALVHLFVNETVTNSSYVQELVRRNMETPVGQNIGDGEITPQTNDYVKIIIAIIAGTMTVILVIFVTALVRCRQTPRHKVVQKNKQSGEWVSPNQENRQIKKKKKKKKRSPKSLLLNFVTIEESKPDDPGHEHINGTLDIPVELEEQTMGKYNWATTPTTFKPDSPDLAKHYKSASPQPTFQIKPETPVPPKKHHVIQELPLDNTFVVGCDSLSKCSSSSSDPYSVSECSCQGGFKTPGPIHTRQHTKEVGRPQTPLKETTLEPWTQPQPQRRVTFHLPDGSQESCSDSGLGDHEPSSGASASHPLPLGFPQDEFYEQASPNSRTEGDGNSDPESTIEVNLQKALAEASENCTQECLILGHSDNCWMPPALTQFQQPNPSLPSFGFQQGWGRGARPEGRHTLGRPLPKDDSDKGQAGPRPQFYNTCERHCATEDPVKVIPLANFAASHPAPGAGSSSTFIHEHQL
SIO_010081: PCDH11X
subclass of: SO_0000673
so part of: PCDH11X
location: complement(join(2245595..2245986,2362252..2362450,2467993..2468064,2591179..2593665,2596767..2596814,2617100..2617639))
location: region:2245595-2617639:-1
so has part: feature:2617100-2617639:-1:exon
so has part: feature:2596767-2596814:-1:exon
so has part: feature:2591179-2593665:-1:exon
so has part: feature:2467993-2468064:-1:exon
so has part: feature:2362252-2362450:-1:exon
so has part: feature:2245595-2245986:-1:exon

XP_030823785.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:2617100-2617639:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2596767-2596814:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2591179-2593665:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2467993-2468064:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2362252-2362450:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2245595-2245986:-1:exon

PCDH11X
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 87175
gene: PCDH11X
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protocadherin-11 X-linked isoform X1
translation: MDLLSGTYLLAVLLACIVFQSGAQEKNYTVREELPENVLIGNLLKDLNLTLDPDVPLSSPLQFKLVYKTGDVPLVRVEENTGEIFTAANRIDREKLCAGIFSENRCFYEVEVAVLPDEVFRLVKIRFLIEDINDNAPLFPSTVINISIPENTAINSRYSVPSAIDPDIGVNGIQHYELLKPKTAPKRTFGSITNDQGQNVFGLDITETPEGDKWPQLIVQQILDREQKDTYVMKIKVEDGGSPPRSSTAILQVTVTDVNDNRPVFKENDIEVSVPENAPVGTSVSQLHATDADLGSNAQIHFYFSNQISSLAKRLFAIDNTTGLITIREPLDREESPVHKLTVLASDGSSTPSRATVTVNVTDINDNVPSIDTRYIINPVNGTVLLSEKAPLNTKIALITVMDKDADQNGKVTCFTDHDVPFRLKPVFDNQFLLETATFLDYEATREYAIKIVASDSGKPPLNQSAMLLIKIKDENDNAPVFTQPIIGLSIPENNAPGTQLTKISATDADSGRNAEISYILGPDAPPIFNLDRRTGILTAVRKLDREKQDRYSFTVLAKDNGMPPLQTNATVTVSVLDQNDNSPAFTHNEYNFYVPENLPMYGTVGLITVTDADAGDNAAVTLSILNGRDNFIIDPLTGVIRPNITFDREQQGSYTFQVKAVDGGRLQRSSTAKVTINVVDVNDNRPVFVIPSSNYSYELVPTSASPGSVVTKVFAVDNDTGMNAELRYSIIGGNSRGLFTIDQLTGNITLKEKVITSDHGLHRLVIKVNDLGQPESLYTIALVHLFVNETVTNSSYVQELVRRNMETPVGQNIGDGEITPQTNDYVKIIIAIIAGTMTVILVIFVTALVRCRQTPRHKVVQKNKQSGEWVSPNQENRQIKKKKKKKKRSPKSLLLNFVTIEESKPDDPGHEHINGTLDIPVELEEQTMGKYNWATTPTTFKPDSPDLAKHYKSASPQPTFQIKPETPVPPKKHHVIQELPLDNTFVVGCDSLSKCSSSSSDPYSVSECSCQGGFKTPGPIHTRQHTKEVGRPQTPLKETTLEPWTQPQPQRRVTFHLPDGSQESCSDSGLGDHEPSSGASASHPLPLGFPQDEFYEQASPNSRTEGDGNSDPESTIEVNLQKALAEASENCTQECLILGHSDNCWMPPALTQFQQPNPSLPSFGFQQGWGRGARPEGRHTLGRPLPKDDSDKGQAGPRPQFYNTCERHCATEDPVKVIPLANFAASHPAPGAGSSSTFIHEHQL
SIO_010081: PCDH11X
subclass of: SO_0000673
so part of: PCDH11X
location: complement(join(2245595..2245986,2362252..2362450,2467993..2468064,2591179..2593665,2596767..2596814,2617100..2617639))
location: region:2245595-2617639:-1
so has part: feature:2617100-2617639:-1:exon
so has part: feature:2596767-2596814:-1:exon
so has part: feature:2591179-2593665:-1:exon
so has part: feature:2467993-2468064:-1:exon
so has part: feature:2362252-2362450:-1:exon
so has part: feature:2245595-2245986:-1:exon

XP_030823786.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:2617100-2617639:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2596767-2596814:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2591179-2593665:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2467993-2468064:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2362252-2362450:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2245595-2245986:-1:exon

PCDH11X
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 87175
gene: PCDH11X
product: protocadherin 11 X-linked, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 1 EST, 6 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_030967928.1
SIO_010081: PCDH11X
subclass of: SO_0000673
so part of: PCDH11X
location: complement(join(2245839..2245986,2467993..2468064,2591179..2593665,2596767..2596814,2617100..2617683,2661572..2662062))
location: region:2245839-2662062:-1
so has part: feature:2661572-2662062:-1:exon
so has part: feature:2617100-2617683:-1:exon
so has part: feature:2596767-2596814:-1:exon
so has part: feature:2591179-2593665:-1:exon
so has part: feature:2467993-2468064:-1:exon
so has part: feature:2245839-2245986:-1:exon

position:2245839:-1
position: 2245839
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2661572-2662062:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2617100-2617683:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2596767-2596814:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2591179-2593665:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2467993-2468064:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2245839-2245986:-1:exon

PCDH11X
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 87175
gene: PCDH11X
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protocadherin-11 X-linked isoform X3
translation: MDLLSGTYLLAVLLACIVFQSGAQEKNYTVREELPENVLIGNLLKDLNLTLDPDVPLSSPLQFKLVYKTGDVPLVRVEENTGEIFTAANRIDREKLCAGIFSENRCFYEVEVAVLPDEVFRLVKIRFLIEDINDNAPLFPSTVINISIPENTAINSRYSVPSAIDPDIGVNGIQHYELLKPKTAPKRTFGSITNDQGQNVFGLDITETPEGDKWPQLIVQQILDREQKDTYVMKIKVEDGGSPPRSSTAILQVTVTDVNDNRPVFKENDIEVSVPENAPVGTSVSQLHATDADLGSNAQIHFYFSNQISSLAKRLFAIDNTTGLITIREPLDREESPVHKLTVLASDGSSTPSRATVTVNVTDINDNVPSIDTRYIINPVNGTVLLSEKAPLNTKIALITVMDKDADQNGKVTCFTDHDVPFRLKPVFDNQFLLETATFLDYEATREYAIKIVASDSGKPPLNQSAMLLIKIKDENDNAPVFTQPIIGLSIPENNAPGTQLTKISATDADSGRNAEISYILGPDAPPIFNLDRRTGILTAVRKLDREKQDRYSFTVLAKDNGMPPLQTNATVTVSVLDQNDNSPAFTHNEYNFYVPENLPMYGTVGLITVTDADAGDNAAVTLSILNGRDNFIIDPLTGVIRPNITFDREQQGSYTFQVKAVDGGRLQRSSTAKVTINVVDVNDNRPVFVIPSSNYSYELVPTSASPGSVVTKVFAVDNDTGMNAELRYSIIGGNSRGLFTIDQLTGNITLKEKVITSDHGLHRLVIKVNDLGQPESLYTIALVHLFVNETVTNSSYVQELVRRNMETPVGQNIGDGEITPQTNDYVKIIIAIIAGTMTVILVIFVTALVRCRQTPRHKVVQKNKQSGEWVSPNQENRQIKKKKKKKKRSPKSLLLNFVTIEESKPDDPGHEHINGTLDIPVELEEQTMGKYNWATTPTTFKPDSPDLAKHYKSASPQPTFQIKPETPVPPKKHHVIQELPLDNTFVVGCDSLSKCSSSSSDPYSVSECSCQGGFKTPGPIHTRQHTKEVGRPQTPLKETTLEPWTQPQLSK
SIO_010081: PCDH11X
subclass of: SO_0000673
so part of: PCDH11X
location: complement(join(2245975..2245986,2467993..2468064,2591179..2593665,2596767..2596814,2617100..2617639))
location: region:2245975-2617639:-1
so has part: feature:2617100-2617639:-1:exon
so has part: feature:2596767-2596814:-1:exon
so has part: feature:2591179-2593665:-1:exon
so has part: feature:2467993-2468064:-1:exon
so has part: feature:2245975-2245986:-1:exon

XP_030823788.1
type: Protein
SIO_000068: ncbiprotein

position:2245975:-1
position: 2245975
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2617100-2617639:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2596767-2596814:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2591179-2593665:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2467993-2468064:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2245975-2245986:-1:exon

PCDH11X
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 87175
gene: PCDH11X
product: protocadherin 11 X-linked, transcript variant X5
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 4 ESTs, 6 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
transcript id: XM_030967929.1
SIO_010081: PCDH11X
subclass of: SO_0000673
so part of: PCDH11X
location: complement(join(2581002..2584860,2591179..2593665,2596767..2596814,2617100..2617683,2661572..2662062))
location: region:2581002-2662062:-1
so has part: feature:2661572-2662062:-1:exon
so has part: feature:2617100-2617683:-1:exon
so has part: feature:2596767-2596814:-1:exon
so has part: feature:2591179-2593665:-1:exon
so has part: feature:2581002-2584860:-1:exon

position:2581002:-1
position: 2581002
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2661572-2662062:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2617100-2617683:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2596767-2596814:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2591179-2593665:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2581002-2584860:-1:exon

position:2584860:-1
position: 2584860
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

PCDH11X
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 87175
gene: PCDH11X
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protocadherin-11 X-linked isoform X4
translation: MDLLSGTYLLAVLLACIVFQSGAQEKNYTVREELPENVLIGNLLKDLNLTLDPDVPLSSPLQFKLVYKTGDVPLVRVEENTGEIFTAANRIDREKLCAGIFSENRCFYEVEVAVLPDEVFRLVKIRFLIEDINDNAPLFPSTVINISIPENTAINSRYSVPSAIDPDIGVNGIQHYELLKPKTAPKRTFGSITNDQGQNVFGLDITETPEGDKWPQLIVQQILDREQKDTYVMKIKVEDGGSPPRSSTAILQVTVTDVNDNRPVFKENDIEVSVPENAPVGTSVSQLHATDADLGSNAQIHFYFSNQISSLAKRLFAIDNTTGLITIREPLDREESPVHKLTVLASDGSSTPSRATVTVNVTDINDNVPSIDTRYIINPVNGTVLLSEKAPLNTKIALITVMDKDADQNGKVTCFTDHDVPFRLKPVFDNQFLLETATFLDYEATREYAIKIVASDSGKPPLNQSAMLLIKIKDENDNAPVFTQPIIGLSIPENNAPGTQLTKISATDADSGRNAEISYILGPDAPPIFNLDRRTGILTAVRKLDREKQDRYSFTVLAKDNGMPPLQTNATVTVSVLDQNDNSPAFTHNEYNFYVPENLPMYGTVGLITVTDADAGDNAAVTLSILNGRDNFIIDPLTGVIRPNITFDREQQGSYTFQVKAVDGGRLQRSSTAKVTINVVDVNDNRPVFVIPSSNYSYELVPTSASPGSVVTKVFAVDNDTGMNAELRYSIIGGNSRGLFTIDQLTGNITLKEKVITSDHGLHRLVIKVNDLGQPESLYTIALVHLFVNETVTNSSYVQELVRRNMETPVGQNIGDGEITPQTNDYVKIIIAIIAGTMTVILVIFVTALVRCRQTPRHKVVQKNKQSGEWVSPNQENRQIKKKKKKKKRSPKSLLLNFVTIEESKPDDPGHEHINGTLDIPVELEEQTMGKYNWATTPTTFKPDSPDLAKHYKSASPQPTFQIKPETPVPPKKHHVIQELPLDNTFVVGCDSLSKCSSSSSDPYSVSECSCQGGFKTPGPIHTRQL
SIO_010081: PCDH11X
subclass of: SO_0000673
so part of: PCDH11X
location: complement(join(2584855..2584860,2591179..2593665,2596767..2596814,2617100..2617639))
location: region:2584855-2617639:-1
so has part: feature:2617100-2617639:-1:exon
so has part: feature:2596767-2596814:-1:exon
so has part: feature:2591179-2593665:-1:exon
so has part: feature:2584855-2584860:-1:exon

XP_030823789.1
type: Protein
SIO_000068: ncbiprotein

position:2584855:-1
position: 2584855
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2617100-2617639:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2596767-2596814:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2591179-2593665:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2584855-2584860:-1:exon

KLHL4
type: Gene
subclass of: SO_0000704
RO_0002162: 87175
gene: KLHL4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(3544046..3619286)
location: region:3544046-3619286:-1
so has part: feature:3544046-3619286:-1:exon
subclass of: SO_0000010

115914980
type: Gene
SIO_000068: ncbigene

position:3544046:-1
position: 3544046
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3619286:-1
position: 3619286
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3544046-3619286:-1:exon

KLHL4
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 87175
gene: KLHL4
product: kelch like family member 4, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 ESTs, 19 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_030967889.1
SIO_010081: KLHL4
subclass of: SO_0000673
so part of: KLHL4
location: complement(join(3544046..3545666,3546406..3546577,3548292..3548504,3551094..3551256,3553093..3553317,3556712..3556898,3557943..3558155,3560988..3561184,3561819..3561955,3562850..3563020,3619212..3619286))
location: region:3544046-3619286:-1
so has part: feature:3619212-3619286:-1:exon
so has part: feature:3562850-3563020:-1:exon
so has part: feature:3561819-3561955:-1:exon
so has part: feature:3560988-3561184:-1:exon
so has part: feature:3557943-3558155:-1:exon
so has part: feature:3556712-3556898:-1:exon
so has part: feature:3553093-3553317:-1:exon
so has part: feature:3551094-3551256:-1:exon
so has part: feature:3548292-3548504:-1:exon
so has part: feature:3546406-3546577:-1:exon
so has part: feature:3544046-3545666:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3619212-3619286:-1:exon

position:3619212:-1
position: 3619212
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:3562850-3563020:-1:exon

position:3562850:-1
position: 3562850
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3563020:-1
position: 3563020
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:3561819-3561955:-1:exon

position:3561819:-1
position: 3561819
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3561955:-1
position: 3561955
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:3560988-3561184:-1:exon

position:3560988:-1
position: 3560988
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3561184:-1
position: 3561184
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:3557943-3558155:-1:exon

position:3557943:-1
position: 3557943
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3558155:-1
position: 3558155
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:3556712-3556898:-1:exon

position:3556712:-1
position: 3556712
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3556898:-1
position: 3556898
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:3553093-3553317:-1:exon

position:3553093:-1
position: 3553093
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3553317:-1
position: 3553317
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:3551094-3551256:-1:exon

position:3551094:-1
position: 3551094
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3551256:-1
position: 3551256
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:3548292-3548504:-1:exon

position:3548292:-1
position: 3548292
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3548504:-1
position: 3548504
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:3546406-3546577:-1:exon

position:3546406:-1
position: 3546406
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3546577:-1
position: 3546577
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:3544046-3545666:-1:exon

position:3545666:-1
position: 3545666
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

KLHL4
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 87175
gene: KLHL4
product: kelch like family member 4, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 ESTs, 22 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_030967887.1
SIO_010081: KLHL4
subclass of: SO_0000673
so part of: KLHL4
location: complement(join(3544046..3545666,3546406..3546577,3548292..3548504,3551094..3551256,3553093..3553317,3556712..3556898,3557943..3558155,3560988..3561184,3561819..3561955,3562850..3563020,3581513..3582622))
location: region:3544046-3582622:-1
so has part: feature:3581513-3582622:-1:exon
so has part: feature:3562850-3563020:-1:exon
so has part: feature:3561819-3561955:-1:exon
so has part: feature:3560988-3561184:-1:exon
so has part: feature:3557943-3558155:-1:exon
so has part: feature:3556712-3556898:-1:exon
so has part: feature:3553093-3553317:-1:exon
so has part: feature:3551094-3551256:-1:exon
so has part: feature:3548292-3548504:-1:exon
so has part: feature:3546406-3546577:-1:exon
so has part: feature:3544046-3545666:-1:exon

position:3582622:-1
position: 3582622
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3581513-3582622:-1:exon

position:3581513:-1
position: 3581513
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:3562850-3563020:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3561819-3561955:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3560988-3561184:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3557943-3558155:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3556712-3556898:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3553093-3553317:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3551094-3551256:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3548292-3548504:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:3546406-3546577:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:3544046-3545666:-1:exon

KLHL4
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 87175
gene: KLHL4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: kelch-like protein 4 isoform X1
translation: MSVSGKKEFDVKQILRLRWRWFSHPSQGSAGSGGCHQQEGYEHRGTPVQSRLKSHSRDRNGLKKNSSPVHHNILAPVPGPTPGHHRSIRSWHQQSLIEQLRSSEDSSKSSAQENSGKEESSKTTQELQMITEQNADESAERLSTTSSSLGMSTNGSDEYFQSSNHAEQTFRKMESYLQQQQLCDVLLIAGDQRIPAHRLVLSAVSDYFAAMFTNDVREAKQEEIKMEGVDPEALKALVRYAYTGILELKEDTIESLLAAACLLQLSQVIEVCCNFLMKQLHPSNCLGIRSFGDAQGCTELLKVAHTYTMEHFIEVIKNQEFLLLPANEIAKLLSSDDINVPDEEAIFQALMMWVRHDLQTRQQDLGMLLSYIRLPLLPPQLLADLENSPMFADDLECQKLLMEAMKYHLLPERRSMMQSPRTKPRKSTVGALYAVGGMDATKGTTTIEKYDLRTNSWIQIGTMNGRRLQFGVAVIDNKLYIVGGRDGLKTSNIVECFNPVTKAWTVMPPMSTHRHGLGVAMLEGPMYAVGGHDGWSYLNTVERWDPQARQWNYVASMSTPRSTVGVAALNSKLYAVGGRDGSSCLKSMECFDPHTNKWSLCASMSKRRGGVGVATYNGFLYAVGGHDAPASNHCSRLSDCVERYDPKTDAWTTVAPLSVPRDAVGICPLGDRLYAVGGYDGHSYLDTVESYDAQNNEWTEEVPVNIGRAGACVVVVKLP
SIO_010081: KLHL4
subclass of: SO_0000673
so part of: KLHL4
location: complement(join(3545607..3545666,3546406..3546577,3548292..3548504,3551094..3551256,3553093..3553317,3556712..3556898,3557943..3558155,3560988..3561184,3561819..3561955,3562850..3563020,3581513..3581934))
location: region:3545607-3581934:-1
so has part: feature:3581513-3581934:-1:exon
so has part: feature:3562850-3563020:-1:exon
so has part: feature:3561819-3561955:-1:exon
so has part: feature:3560988-3561184:-1:exon
so has part: feature:3557943-3558155:-1:exon
so has part: feature:3556712-3556898:-1:exon
so has part: feature:3553093-3553317:-1:exon
so has part: feature:3551094-3551256:-1:exon
so has part: feature:3548292-3548504:-1:exon
so has part: feature:3546406-3546577:-1:exon
so has part: feature:3545607-3545666:-1:exon

XP_030823747.1
type: Protein
SIO_000068: ncbiprotein

position:3545607:-1
position: 3545607
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3581934:-1
position: 3581934
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3581513-3581934:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3562850-3563020:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3561819-3561955:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3560988-3561184:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3557943-3558155:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3556712-3556898:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3553093-3553317:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3551094-3551256:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3548292-3548504:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:3546406-3546577:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:3545607-3545666:-1:exon

KLHL4
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 87175
gene: KLHL4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: kelch-like protein 4 isoform X2
translation: MSTNGSDEYFQSSNHAEQTFRKMESYLQQQQLCDVLLIAGDQRIPAHRLVLSAVSDYFAAMFTNDVREAKQEEIKMEGVDPEALKALVRYAYTGILELKEDTIESLLAAACLLQLSQVIEVCCNFLMKQLHPSNCLGIRSFGDAQGCTELLKVAHTYTMEHFIEVIKNQEFLLLPANEIAKLLSSDDINVPDEEAIFQALMMWVRHDLQTRQQDLGMLLSYIRLPLLPPQLLADLENSPMFADDLECQKLLMEAMKYHLLPERRSMMQSPRTKPRKSTVGALYAVGGMDATKGTTTIEKYDLRTNSWIQIGTMNGRRLQFGVAVIDNKLYIVGGRDGLKTSNIVECFNPVTKAWTVMPPMSTHRHGLGVAMLEGPMYAVGGHDGWSYLNTVERWDPQARQWNYVASMSTPRSTVGVAALNSKLYAVGGRDGSSCLKSMECFDPHTNKWSLCASMSKRRGGVGVATYNGFLYAVGGHDAPASNHCSRLSDCVERYDPKTDAWTTVAPLSVPRDAVGICPLGDRLYAVGGYDGHSYLDTVESYDAQNNEWTEEVPVNIGRAGACVVVVKLP
SIO_010081: KLHL4
subclass of: SO_0000673
so part of: KLHL4
location: complement(join(3545607..3545666,3546406..3546577,3548292..3548504,3551094..3551256,3553093..3553317,3556712..3556898,3557943..3558155,3560988..3561184,3561819..3561955,3562850..3562992))
location: region:3545607-3562992:-1
so has part: feature:3562850-3562992:-1:exon
so has part: feature:3561819-3561955:-1:exon
so has part: feature:3560988-3561184:-1:exon
so has part: feature:3557943-3558155:-1:exon
so has part: feature:3556712-3556898:-1:exon
so has part: feature:3553093-3553317:-1:exon
so has part: feature:3551094-3551256:-1:exon
so has part: feature:3548292-3548504:-1:exon
so has part: feature:3546406-3546577:-1:exon
so has part: feature:3545607-3545666:-1:exon

XP_030823749.1
type: Protein
SIO_000068: ncbiprotein

position:3562992:-1
position: 3562992
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3562850-3562992:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3561819-3561955:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3560988-3561184:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3557943-3558155:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3556712-3556898:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3553093-3553317:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3551094-3551256:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3548292-3548504:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3546406-3546577:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:3545607-3545666:-1:exon

DACH2
type: Gene
subclass of: SO_0000704
RO_0002162: 87175
gene: DACH2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(3726941..3969043)
location: region:3726941-3969043:-1
so has part: feature:3726941-3969043:-1:exon
subclass of: SO_0000010

115915042
type: Gene
SIO_000068: ncbigene

position:3726941:-1
position: 3726941
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3969043:-1
position: 3969043
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3726941-3969043:-1:exon

DACH2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 87175
gene: DACH2
product: dachshund family transcription factor 2, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 mRNAs, 6 ESTs, 6 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_030967999.1
SIO_010081: DACH2
subclass of: SO_0000673
so part of: DACH2
location: complement(join(3726941..3727819,3735374..3735439,3738450..3738593,3739955..3740102,3740612..3740757,3770374..3770454,3772666..3772801,3783707..3783879,3787192..3787347,3811666..3811797,3850275..3850390,3968528..3969043))
location: region:3726941-3969043:-1
so has part: feature:3968528-3969043:-1:exon
so has part: feature:3850275-3850390:-1:exon
so has part: feature:3811666-3811797:-1:exon
so has part: feature:3787192-3787347:-1:exon
so has part: feature:3783707-3783879:-1:exon
so has part: feature:3772666-3772801:-1:exon
so has part: feature:3770374-3770454:-1:exon
so has part: feature:3740612-3740757:-1:exon
so has part: feature:3739955-3740102:-1:exon
so has part: feature:3738450-3738593:-1:exon
so has part: feature:3735374-3735439:-1:exon
so has part: feature:3726941-3727819:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3968528-3969043:-1:exon

position:3968528:-1
position: 3968528
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:3850275-3850390:-1:exon

position:3850275:-1
position: 3850275
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3850390:-1
position: 3850390
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:3811666-3811797:-1:exon

position:3811666:-1
position: 3811666
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3811797:-1
position: 3811797
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:3787192-3787347:-1:exon

position:3787192:-1
position: 3787192
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3787347:-1
position: 3787347
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:3783707-3783879:-1:exon

position:3783707:-1
position: 3783707
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3783879:-1
position: 3783879
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:3772666-3772801:-1:exon

position:3772666:-1
position: 3772666
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3772801:-1
position: 3772801
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:3770374-3770454:-1:exon

position:3770374:-1
position: 3770374
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3770454:-1
position: 3770454
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:3740612-3740757:-1:exon

position:3740612:-1
position: 3740612
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3740757:-1
position: 3740757
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:3739955-3740102:-1:exon

position:3739955:-1
position: 3739955
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3740102:-1
position: 3740102
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:3738450-3738593:-1:exon

position:3738450:-1
position: 3738450
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3738593:-1
position: 3738593
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:3735374-3735439:-1:exon

position:3735374:-1
position: 3735374
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3735439:-1
position: 3735439
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:3726941-3727819:-1:exon

position:3727819:-1
position: 3727819
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

DACH2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 87175
gene: DACH2
product: dachshund family transcription factor 2, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 4 ESTs, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_030968000.1
SIO_010081: DACH2
subclass of: SO_0000673
so part of: DACH2
location: complement(join(3726941..3727819,3735374..3735439,3738474..3738593,3739955..3740102,3740612..3740757,3770374..3770454,3772666..3772801,3783707..3783879,3787192..3787347,3811666..3811797,3850275..3850393,3968528..3969043))
location: region:3726941-3969043:-1
so has part: feature:3968528-3969043:-1:exon
so has part: feature:3850275-3850393:-1:exon
so has part: feature:3811666-3811797:-1:exon
so has part: feature:3787192-3787347:-1:exon
so has part: feature:3783707-3783879:-1:exon
so has part: feature:3772666-3772801:-1:exon
so has part: feature:3770374-3770454:-1:exon
so has part: feature:3740612-3740757:-1:exon
so has part: feature:3739955-3740102:-1:exon
so has part: feature:3738474-3738593:-1:exon
so has part: feature:3735374-3735439:-1:exon
so has part: feature:3726941-3727819:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3968528-3969043:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3850275-3850393:-1:exon

position:3850393:-1
position: 3850393
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:3811666-3811797:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3787192-3787347:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3783707-3783879:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3772666-3772801:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3770374-3770454:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3740612-3740757:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3739955-3740102:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:3738474-3738593:-1:exon

position:3738474:-1
position: 3738474
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:3735374-3735439:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:3726941-3727819:-1:exon

DACH2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 87175
gene: DACH2
product: dachshund family transcription factor 2, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 ESTs, 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_030967998.1
SIO_010081: DACH2
subclass of: SO_0000673
so part of: DACH2
location: complement(join(3726941..3727819,3735374..3735439,3738450..3738593,3739955..3740102,3740612..3740757,3770374..3770454,3772666..3772801,3783707..3783879,3787192..3787347,3811666..3811797,3850275..3850393,3968528..3969043))
location: region:3726941-3969043:-1
so has part: feature:3968528-3969043:-1:exon
so has part: feature:3850275-3850393:-1:exon
so has part: feature:3811666-3811797:-1:exon
so has part: feature:3787192-3787347:-1:exon
so has part: feature:3783707-3783879:-1:exon
so has part: feature:3772666-3772801:-1:exon
so has part: feature:3770374-3770454:-1:exon
so has part: feature:3740612-3740757:-1:exon
so has part: feature:3739955-3740102:-1:exon
so has part: feature:3738450-3738593:-1:exon
so has part: feature:3735374-3735439:-1:exon
so has part: feature:3726941-3727819:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3968528-3969043:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3850275-3850393:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3811666-3811797:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3787192-3787347:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3783707-3783879:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3772666-3772801:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3770374-3770454:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3740612-3740757:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3739955-3740102:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:3738450-3738593:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:3735374-3735439:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:3726941-3727819:-1:exon

DACH2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 87175
gene: DACH2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: dachshund homolog 2 isoform X2
translation: MAVSAPPVIAATSSGGGAGGSAGLFRADPLYSSPAESPRLTNSLVNTFLSAGGGGAGAGGGGGGNECKMVDLHGVKVASFLVEGQELICLPQVFDLFLKHLVGGLHTVYTKLKRLDISPVVCTVEQVRILRGLGAIQPGVNRCKLITRKDFETLYNDCTNASSRPGRPPKRSLGVAIQENARLLPHGVPGLLSPGLISPTGLTAAAMAEAMKLQKMKLMAMNSLHGSGSQNGTESENEELNSNAGGSESSWDKDKLQSPITTGSQHSIGHATLSGQSSLGSAHPLSPLQQNHLLTNRIDLPFMMMPHPLLPVSLPPASVAMAMNQMNHLNTIANMAAAAQMHSPLSRAGASVIKERIQDSPSPAPSLEDSQRPGSHASSHPSSSVSSSPSQLDTTPDRIAMLTNSREGELIDQETGTSLKKIQKEKEEVQIAIPIMKPTLDKVQLAGQALPPGFPAPFLFADGLSSVETLLTNIQGLLKVAVDNARVQEKQIQQEKKELKMELCRERELRESLERQLTAELQSRATIQKRLKKEKKAKRKLQEALEFESKRREQVEQALKQATSGDGLRMLNDAGIPDMEIEHNGTQHDSAAMQENRTYIKPTIMY
SIO_010081: DACH2
subclass of: SO_0000673
so part of: DACH2
location: complement(join(3727782..3727819,3735374..3735439,3738450..3738593,3739955..3740102,3740612..3740757,3770374..3770454,3772666..3772801,3783707..3783879,3787192..3787347,3811666..3811797,3850275..3850390,3968528..3969012))
location: region:3727782-3969012:-1
so has part: feature:3968528-3969012:-1:exon
so has part: feature:3850275-3850390:-1:exon
so has part: feature:3811666-3811797:-1:exon
so has part: feature:3787192-3787347:-1:exon
so has part: feature:3783707-3783879:-1:exon
so has part: feature:3772666-3772801:-1:exon
so has part: feature:3770374-3770454:-1:exon
so has part: feature:3740612-3740757:-1:exon
so has part: feature:3739955-3740102:-1:exon
so has part: feature:3738450-3738593:-1:exon
so has part: feature:3735374-3735439:-1:exon
so has part: feature:3727782-3727819:-1:exon

XP_030823859.1
type: Protein
SIO_000068: ncbiprotein

position:3727782:-1
position: 3727782
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3969012:-1
position: 3969012
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3968528-3969012:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3850275-3850390:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3811666-3811797:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3787192-3787347:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3783707-3783879:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3772666-3772801:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3770374-3770454:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3740612-3740757:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3739955-3740102:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:3738450-3738593:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:3735374-3735439:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:3727782-3727819:-1:exon

DACH2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 87175
gene: DACH2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: dachshund homolog 2 isoform X3
translation: MAVSAPPVIAATSSGGGAGGSAGLFRADPLYSSPAESPRLTNSLVNTFLSAGGGGAGAGGGGGGNECKMVDLHGVKVASFLVEGQELICLPQVFDLFLKHLVGGLHTVYTKLKRLDISPVVCTVEQVRILRGLGAIQPGVNRCKLITRKDFETLYNDCTNASSSRPGRPPKRSLGVAIQENARLLPHGVPGLLSPGLISPTGLTAAAMAEAMKLQKMKLMAMNSLHGSGSQNGTESENEELNSNAGGSESSWDKDKLQSPITTGSQHSIGHATLSGQSSLGSAHPLSPLQQNHLLTNRIDLPFMMMPHPLLPVSLPPASVAMAMNQMNHLNTIANMAAAAQMHSPLSRAGASVIKERIQDSPSPAPSLEDSQRPGSHASSHPSSSVSSSPSQLDTTPDRIAMLTNSREGELIDQETGTSLKKIQKEKEEVQIAIPIMKPTLDKVQLAGQALPPGFPAPFLFADGLSSVETLLTNIQGLLKVAVDNARVQEKQIQQEKKELKMELCRERELRESLERQLTAELQSRATIQKRLKKEKKAKRKLQEALEFESKRREQVEQALKQATSDAGIPDMEIEHNGTQHDSAAMQENRTYIKPTIMY
SIO_010081: DACH2
subclass of: SO_0000673
so part of: DACH2
location: complement(join(3727782..3727819,3735374..3735439,3738474..3738593,3739955..3740102,3740612..3740757,3770374..3770454,3772666..3772801,3783707..3783879,3787192..3787347,3811666..3811797,3850275..3850393,3968528..3969012))
location: region:3727782-3969012:-1
so has part: feature:3968528-3969012:-1:exon
so has part: feature:3850275-3850393:-1:exon
so has part: feature:3811666-3811797:-1:exon
so has part: feature:3787192-3787347:-1:exon
so has part: feature:3783707-3783879:-1:exon
so has part: feature:3772666-3772801:-1:exon
so has part: feature:3770374-3770454:-1:exon
so has part: feature:3740612-3740757:-1:exon
so has part: feature:3739955-3740102:-1:exon
so has part: feature:3738474-3738593:-1:exon
so has part: feature:3735374-3735439:-1:exon
so has part: feature:3727782-3727819:-1:exon

XP_030823860.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:3968528-3969012:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3850275-3850393:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3811666-3811797:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3787192-3787347:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3783707-3783879:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3772666-3772801:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3770374-3770454:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3740612-3740757:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3739955-3740102:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:3738474-3738593:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:3735374-3735439:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:3727782-3727819:-1:exon

DACH2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 87175
gene: DACH2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: dachshund homolog 2 isoform X1
translation: MAVSAPPVIAATSSGGGAGGSAGLFRADPLYSSPAESPRLTNSLVNTFLSAGGGGAGAGGGGGGNECKMVDLHGVKVASFLVEGQELICLPQVFDLFLKHLVGGLHTVYTKLKRLDISPVVCTVEQVRILRGLGAIQPGVNRCKLITRKDFETLYNDCTNASSSRPGRPPKRSLGVAIQENARLLPHGVPGLLSPGLISPTGLTAAAMAEAMKLQKMKLMAMNSLHGSGSQNGTESENEELNSNAGGSESSWDKDKLQSPITTGSQHSIGHATLSGQSSLGSAHPLSPLQQNHLLTNRIDLPFMMMPHPLLPVSLPPASVAMAMNQMNHLNTIANMAAAAQMHSPLSRAGASVIKERIQDSPSPAPSLEDSQRPGSHASSHPSSSVSSSPSQLDTTPDRIAMLTNSREGELIDQETGTSLKKIQKEKEEVQIAIPIMKPTLDKVQLAGQALPPGFPAPFLFADGLSSVETLLTNIQGLLKVAVDNARVQEKQIQQEKKELKMELCRERELRESLERQLTAELQSRATIQKRLKKEKKAKRKLQEALEFESKRREQVEQALKQATSGDGLRMLNDAGIPDMEIEHNGTQHDSAAMQENRTYIKPTIMY
SIO_010081: DACH2
subclass of: SO_0000673
so part of: DACH2
location: complement(join(3727782..3727819,3735374..3735439,3738450..3738593,3739955..3740102,3740612..3740757,3770374..3770454,3772666..3772801,3783707..3783879,3787192..3787347,3811666..3811797,3850275..3850393,3968528..3969012))
location: region:3727782-3969012:-1
so has part: feature:3968528-3969012:-1:exon
so has part: feature:3850275-3850393:-1:exon
so has part: feature:3811666-3811797:-1:exon
so has part: feature:3787192-3787347:-1:exon
so has part: feature:3783707-3783879:-1:exon
so has part: feature:3772666-3772801:-1:exon
so has part: feature:3770374-3770454:-1:exon
so has part: feature:3740612-3740757:-1:exon
so has part: feature:3739955-3740102:-1:exon
so has part: feature:3738450-3738593:-1:exon
so has part: feature:3735374-3735439:-1:exon
so has part: feature:3727782-3727819:-1:exon

XP_030823858.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:3968528-3969012:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3850275-3850393:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3811666-3811797:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3787192-3787347:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3783707-3783879:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3772666-3772801:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3770374-3770454:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3740612-3740757:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3739955-3740102:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:3738450-3738593:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:3735374-3735439:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:3727782-3727819:-1:exon

CHM
type: Gene
subclass of: SO_0000704
RO_0002162: 87175
gene: CHM
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 3986795..4037937
location: region:3986795-4037937:1
so has part: feature:3986795-4037937:1:exon
subclass of: SO_0000010

115914754
type: Gene
SIO_000068: ncbigene

position:3986795:1
position: 3986795
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4037937:1
position: 4037937
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3986795-4037937:1:exon

CHM
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 87175
gene: CHM
product: CHM Rab escort protein, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 ESTs, 7 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XM_030967472.1
SIO_010081: CHM
subclass of: SO_0000673
so part of: CHM
location: join(3986795..3986888,3996165..3996231,4001987..4002059,4003194..4003318,4007000..4007423,4008526..4008642,4009261..4009381,4011611..4011836,4021395..4021472,4026241..4026345,4027204..4027267,4028073..4028169,4030373..4030465,4032893..4033059,4035880..4037937)
location: region:3986795-4037937:1
so has part: feature:3986795-3986888:1:exon
so has part: feature:3996165-3996231:1:exon
so has part: feature:4001987-4002059:1:exon
so has part: feature:4003194-4003318:1:exon
so has part: feature:4007000-4007423:1:exon
so has part: feature:4008526-4008642:1:exon
so has part: feature:4009261-4009381:1:exon
so has part: feature:4011611-4011836:1:exon
so has part: feature:4021395-4021472:1:exon
so has part: feature:4026241-4026345:1:exon
so has part: feature:4027204-4027267:1:exon
so has part: feature:4028073-4028169:1:exon
so has part: feature:4030373-4030465:1:exon
so has part: feature:4032893-4033059:1:exon
so has part: feature:4035880-4037937:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3986795-3986888:1:exon

position:3986888:1
position: 3986888
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:3996165-3996231:1:exon

position:3996165:1
position: 3996165
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3996231:1
position: 3996231
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:4001987-4002059:1:exon

position:4001987:1
position: 4001987
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4002059:1
position: 4002059
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:4003194-4003318:1:exon

position:4003194:1
position: 4003194
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4003318:1
position: 4003318
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:4007000-4007423:1:exon

position:4007000:1
position: 4007000
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4007423:1
position: 4007423
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:4008526-4008642:1:exon

position:4008526:1
position: 4008526
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4008642:1
position: 4008642
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:4009261-4009381:1:exon

position:4009261:1
position: 4009261
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4009381:1
position: 4009381
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:4011611-4011836:1:exon

position:4011611:1
position: 4011611
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4011836:1
position: 4011836
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:4021395-4021472:1:exon

position:4021395:1
position: 4021395
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4021472:1
position: 4021472
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:4026241-4026345:1:exon

position:4026241:1
position: 4026241
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4026345:1
position: 4026345
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:4027204-4027267:1:exon

position:4027204:1
position: 4027204
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4027267:1
position: 4027267
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:4028073-4028169:1:exon

position:4028073:1
position: 4028073
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4028169:1
position: 4028169
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:4030373-4030465:1:exon

position:4030373:1
position: 4030373
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4030465:1
position: 4030465
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:4032893-4033059:1:exon

position:4032893:1
position: 4032893
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4033059:1
position: 4033059
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:4035880-4037937:1:exon

position:4035880:1
position: 4035880
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

CHM
type: Miscellaneous RNA
subclass of: SO_0000673
RO_0002162: 87175
gene: CHM
product: CHM Rab escort protein, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XR_004061451.1
SIO_010081: CHM
so part of: CHM
location: join(3986795..3986888,3996165..3996231,4001987..4002059,4003194..4003318,4007004..4007423,4008526..4008642,4009261..4009284)
location: region:3986795-4009284:1
so has part: feature:3986795-3986888:1:exon
so has part: feature:3996165-3996231:1:exon
so has part: feature:4001987-4002059:1:exon
so has part: feature:4003194-4003318:1:exon
so has part: feature:4007004-4007423:1:exon
so has part: feature:4008526-4008642:1:exon
so has part: feature:4009261-4009284:1:exon

position:4009284:1
position: 4009284
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3986795-3986888:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3996165-3996231:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4001987-4002059:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4003194-4003318:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4007004-4007423:1:exon

position:4007004:1
position: 4007004
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:4008526-4008642:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:4009261-4009284:1:exon

CHM
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 87175
gene: CHM
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: rab proteins geranylgeranyltransferase component A 1
translation: MADNLPTEFDVVVVGTGLPESIIAAACARSGQRVLHVDSRNYYGGNWASFSFSGLLSWIKENQQKTDLSDECEDWRKLILEDEEAIPLSSKDKTIQHVEDFCFGDQDSAEGVEEAGALPKLPVFGAPAAQGETPGPGKESPAAEGIPLGSQPSPAAEGVEKENAAVESPGEEPQSCSEAARAAAGDGAGAAPGTGAAPSTAAGDSAPQPAKTDTAPSENAAQEPKKITYSQIVREGRRFNIDLVSKLLYSRGLLIDLLIKSNVSRYAEFKNATRVLAFREGKVEQVPCSRADVFNSRQLTMVEKRMLMKFLTFCLDYEQHPEEYQDHESSTFAEFLQTRKLTPSLQHFILHSIAMVAETESSTLEGLQATKKFLQCLGRYGNTPFLFPLYGQGEIPQCFCRLCAVFGGIYCLRHAVRCLVLDRASGRCKAIVDHFGQRISANYFIVEDSYLSESTCTNVCYRQISRAVLITDQSVLNTDSEQQVSILTVPPLEPGRAAVRAIELCSSTMTCMKDTYLVHLTCPSTKTAREDLEPVVQKLFSLNTEKETGNEELEKPRVLWAVYFNMRDSSGVEKSSYAGLPSNVYVCSGPDSALGNDCAVRQAETIFREMFPAEEFCPPPPNPEDIIYDEDEIEPEESGLNNSPETKPETSAEESSSEGGADVTKEE
SIO_010081: CHM
subclass of: SO_0000673
so part of: CHM
location: join(3986840..3986888,3996165..3996231,4001987..4002059,4003194..4003318,4007000..4007423,4008526..4008642,4009261..4009381,4011611..4011836,4021395..4021472,4026241..4026345,4027204..4027267,4028073..4028169,4030373..4030465,4032893..4033059,4035880..4036077)
location: region:3986840-4036077:1
so has part: feature:3986840-3986888:1:exon
so has part: feature:3996165-3996231:1:exon
so has part: feature:4001987-4002059:1:exon
so has part: feature:4003194-4003318:1:exon
so has part: feature:4007000-4007423:1:exon
so has part: feature:4008526-4008642:1:exon
so has part: feature:4009261-4009381:1:exon
so has part: feature:4011611-4011836:1:exon
so has part: feature:4021395-4021472:1:exon
so has part: feature:4026241-4026345:1:exon
so has part: feature:4027204-4027267:1:exon
so has part: feature:4028073-4028169:1:exon
so has part: feature:4030373-4030465:1:exon
so has part: feature:4032893-4033059:1:exon
so has part: feature:4035880-4036077:1:exon

XP_030823332.1
type: Protein
SIO_000068: ncbiprotein

position:3986840:1
position: 3986840
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4036077:1
position: 4036077
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3986840-3986888:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3996165-3996231:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4001987-4002059:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4003194-4003318:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4007000-4007423:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:4008526-4008642:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:4009261-4009381:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:4011611-4011836:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:4021395-4021472:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:4026241-4026345:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:4027204-4027267:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:4028073-4028169:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:4030373-4030465:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:4032893-4033059:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:4035880-4036077:1:exon

POF1B
type: Gene
subclass of: SO_0000704
RO_0002162: 87175
gene: POF1B
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 4073361..4090689
location: region:4073361-4090689:1
so has part: feature:4073361-4090689:1:exon
subclass of: SO_0000010

115914739
type: Gene
SIO_000068: ncbigene

position:4073361:1
position: 4073361
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4090689:1
position: 4090689
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4073361-4090689:1:exon

POF1B
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 87175
gene: POF1B
product: POF1B actin binding protein
exception: unclassified transcription discrepancy
note: The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: inserted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 97% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_030967451.1
SIO_010081: POF1B
subclass of: SO_0000673
so part of: POF1B
location: join(4073361..4073692,4078807..4078845,4079221..4079322,4080824..4080988,4081951..4082081,4083020..4083047,4083858..4083932,4086150..4086242,4086751..4086864,4087020..4087172,4087276..4087386,4088019..4088147,4088425..4088498,4088588..4088702,4089721..4090689)
location: region:4073361-4090689:1
so has part: feature:4073361-4073692:1:exon
so has part: feature:4078807-4078845:1:exon
so has part: feature:4079221-4079322:1:exon
so has part: feature:4080824-4080988:1:exon
so has part: feature:4081951-4082081:1:exon
so has part: feature:4083020-4083047:1:exon
so has part: feature:4083858-4083932:1:exon
so has part: feature:4086150-4086242:1:exon
so has part: feature:4086751-4086864:1:exon
so has part: feature:4087020-4087172:1:exon
so has part: feature:4087276-4087386:1:exon
so has part: feature:4088019-4088147:1:exon
so has part: feature:4088425-4088498:1:exon
so has part: feature:4088588-4088702:1:exon
so has part: feature:4089721-4090689:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:4073361-4073692:1:exon

position:4073692:1
position: 4073692
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:4078807-4078845:1:exon

position:4078807:1
position: 4078807
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4078845:1
position: 4078845
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:4079221-4079322:1:exon

position:4079221:1
position: 4079221
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4079322:1
position: 4079322
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:4080824-4080988:1:exon

position:4080824:1
position: 4080824
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4080988:1
position: 4080988
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:4081951-4082081:1:exon

position:4081951:1
position: 4081951
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4082081:1
position: 4082081
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:4083020-4083047:1:exon

position:4083020:1
position: 4083020
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4083047:1
position: 4083047
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:4083858-4083932:1:exon

position:4083858:1
position: 4083858
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4083932:1
position: 4083932
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:4086150-4086242:1:exon

position:4086150:1
position: 4086150
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4086242:1
position: 4086242
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:4086751-4086864:1:exon

position:4086751:1
position: 4086751
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4086864:1
position: 4086864
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:4087020-4087172:1:exon

position:4087020:1
position: 4087020
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4087172:1
position: 4087172
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:4087276-4087386:1:exon

position:4087276:1
position: 4087276
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4087386:1
position: 4087386
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:4088019-4088147:1:exon

position:4088019:1
position: 4088019
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4088147:1
position: 4088147
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:4088425-4088498:1:exon

position:4088425:1
position: 4088425
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4088498:1
position: 4088498
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:4088588-4088702:1:exon

position:4088588:1
position: 4088588
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4088702:1
position: 4088702
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:4089721-4090689:1:exon

position:4089721:1
position: 4089721
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

POF1B
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 87175
gene: POF1B
exception: unclassified translation discrepancy
note: The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: inserted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: LOW QUALITY PROTEIN: protein POF1B
translation: MFGAQQQLQPPALXPHLQPQQHHYYRRQQHYSTLPARRPCPEPPPCPEPPPCPEPPRPLPCLDPAPHPQQDGAVAYDRVRTYGPGCRRLSTSCSSRAASPLDCGHGCDPPQGTIRRIIIENPDQEPLSPFLRGASFSPGNNVIYEKTIRKYELLNPLQERQFPLCPPEPCPPPPVLQQCQQTQTGSPCELCPGPGSDECRGHPVRRGTAPPELVSCPQERPEQLDCRFFGELLAELHRKSNDLYSCLLQHVEKIGTRNHDIEFTCQTEDIEELIPKGLSEATKQQIRYLLQMRATSDKSLRLVLSTFKNLREELCHLQDDLGKLETDNVLLKKDLAFKDCQVKEYEAMLASLRENNRQQQQGLRDSTAKCRSLEEQLLSLRLSEGDKDCQLKELEYSKRALEQEIQSLKLQSCSSPTLQTTTDELSSRYVEMINNLREDKDREIRSLRSQLCQFQQDITRREGSNSDLQMRLHELTSLLEDKEAFIKQQQEELFRLKHDKFSGSQSPGVTAIITKKYRNQYPILGLLSDDYKVTSPVNKSQTIVIERTGEIWKHE
SIO_010081: POF1B
subclass of: SO_0000673
so part of: POF1B
location: join(4073361..4073692,4078807..4078845,4079221..4079322,4080824..4080988,4081951..4082081,4083020..4083047,4083858..4083932,4086150..4086242,4086751..4086864,4087020..4087172,4087276..4087386,4088019..4088147,4088425..4088498,4088588..4088702,4089721..4089726)
location: region:4073361-4089726:1
so has part: feature:4073361-4073692:1:exon
so has part: feature:4078807-4078845:1:exon
so has part: feature:4079221-4079322:1:exon
so has part: feature:4080824-4080988:1:exon
so has part: feature:4081951-4082081:1:exon
so has part: feature:4083020-4083047:1:exon
so has part: feature:4083858-4083932:1:exon
so has part: feature:4086150-4086242:1:exon
so has part: feature:4086751-4086864:1:exon
so has part: feature:4087020-4087172:1:exon
so has part: feature:4087276-4087386:1:exon
so has part: feature:4088019-4088147:1:exon
so has part: feature:4088425-4088498:1:exon
so has part: feature:4088588-4088702:1:exon
so has part: feature:4089721-4089726:1:exon

XP_030823311.1
type: Protein
SIO_000068: ncbiprotein

position:4089726:1
position: 4089726
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4073361-4073692:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4078807-4078845:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4079221-4079322:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4080824-4080988:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4081951-4082081:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:4083020-4083047:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:4083858-4083932:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:4086150-4086242:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:4086751-4086864:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:4087020-4087172:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:4087276-4087386:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:4088019-4088147:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:4088425-4088498:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:4088588-4088702:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:4089721-4089726:1:exon

LOC115914740
type: Gene
subclass of: SO_0000704
RO_0002162: 87175
gene: LOC115914740
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(4084464..4092456)
location: region:4084464-4092456:-1
so has part: feature:4084464-4092456:-1:exon
subclass of: SO_0000011

115914740
type: Gene
SIO_000068: ncbigene

position:4084464:-1
position: 4084464
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4092456:-1
position: 4092456
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4084464-4092456:-1:exon

LOC115914740
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 87175
nc RNA class: lncRNA
gene: LOC115914740
product: uncharacterized LOC115914740
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 ESTs, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XR_004061450.1
SIO_010081: LOC115914740
subclass of: SO_0000673
so part of: LOC115914740
location: complement(join(4084464..4089949,4091253..4091325,4091421..4092456))
location: region:4084464-4092456:-1
so has part: feature:4091421-4092456:-1:exon
so has part: feature:4091253-4091325:-1:exon
so has part: feature:4084464-4089949:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:4091421-4092456:-1:exon

position:4091421:-1
position: 4091421
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:4091253-4091325:-1:exon

position:4091253:-1
position: 4091253
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4091325:-1
position: 4091325
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:4084464-4089949:-1:exon

position:4089949:-1
position: 4089949
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

ZNF711
type: Gene
subclass of: SO_0000704
RO_0002162: 87175
gene: ZNF711
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(4093534..4114116)
location: region:4093534-4114116:-1
so has part: feature:4093534-4114116:-1:exon
subclass of: SO_0000010

115914738
type: Gene
SIO_000068: ncbigene

position:4093534:-1
position: 4093534
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4114116:-1
position: 4114116
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4093534-4114116:-1:exon

ZNF711
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 87175
gene: ZNF711
product: zinc finger protein 711, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 11 ESTs, 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_030967448.1
SIO_010081: ZNF711
subclass of: SO_0000673
so part of: ZNF711
location: complement(join(4093534..4096384,4096848..4096991,4097504..4097551,4098689..4098826,4100341..4100499,4108086..4108616,4109415..4109519,4114057..4114116))
location: region:4093534-4114116:-1
so has part: feature:4114057-4114116:-1:exon
so has part: feature:4109415-4109519:-1:exon
so has part: feature:4108086-4108616:-1:exon
so has part: feature:4100341-4100499:-1:exon
so has part: feature:4098689-4098826:-1:exon
so has part: feature:4097504-4097551:-1:exon
so has part: feature:4096848-4096991:-1:exon
so has part: feature:4093534-4096384:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:4114057-4114116:-1:exon

position:4114057:-1
position: 4114057
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:4109415-4109519:-1:exon

position:4109415:-1
position: 4109415
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4109519:-1
position: 4109519
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:4108086-4108616:-1:exon

position:4108086:-1
position: 4108086
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4108616:-1
position: 4108616
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:4100341-4100499:-1:exon

position:4100341:-1
position: 4100341
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4100499:-1
position: 4100499
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:4098689-4098826:-1:exon

position:4098689:-1
position: 4098689
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4098826:-1
position: 4098826
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:4097504-4097551:-1:exon

position:4097504:-1
position: 4097504
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4097551:-1
position: 4097551
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:4096848-4096991:-1:exon

position:4096848:-1
position: 4096848
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4096991:-1
position: 4096991
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:4093534-4096384:-1:exon

position:4096384:-1
position: 4096384
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

ZNF711
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 87175
gene: ZNF711
product: zinc finger protein 711, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 13 ESTs, 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XM_030967447.1
SIO_010081: ZNF711
subclass of: SO_0000673
so part of: ZNF711
location: complement(join(4093534..4096384,4096956..4096991,4097504..4097551,4098689..4098826,4099397..4099543,4100341..4100499,4108086..4108616,4109415..4109519,4114057..4114116))
location: region:4093534-4114116:-1
so has part: feature:4114057-4114116:-1:exon
so has part: feature:4109415-4109519:-1:exon
so has part: feature:4108086-4108616:-1:exon
so has part: feature:4100341-4100499:-1:exon
so has part: feature:4099397-4099543:-1:exon
so has part: feature:4098689-4098826:-1:exon
so has part: feature:4097504-4097551:-1:exon
so has part: feature:4096956-4096991:-1:exon
so has part: feature:4093534-4096384:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:4114057-4114116:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4109415-4109519:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4108086-4108616:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4100341-4100499:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4099397-4099543:-1:exon

position:4099397:-1
position: 4099397
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4099543:-1
position: 4099543
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:4098689-4098826:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:4097504-4097551:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:4096956-4096991:-1:exon

position:4096956:-1
position: 4096956
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:4093534-4096384:-1:exon

ZNF711
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 87175
gene: ZNF711
product: zinc finger protein 711, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 15 ESTs, 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XM_030967446.1
SIO_010081: ZNF711
subclass of: SO_0000673
so part of: ZNF711
location: complement(join(4093534..4096384,4096848..4096991,4097504..4097551,4098689..4098826,4099397..4099543,4100341..4100499,4108086..4108616,4109415..4109519,4114057..4114116))
location: region:4093534-4114116:-1
so has part: feature:4114057-4114116:-1:exon
so has part: feature:4109415-4109519:-1:exon
so has part: feature:4108086-4108616:-1:exon
so has part: feature:4100341-4100499:-1:exon
so has part: feature:4099397-4099543:-1:exon
so has part: feature:4098689-4098826:-1:exon
so has part: feature:4097504-4097551:-1:exon
so has part: feature:4096848-4096991:-1:exon
so has part: feature:4093534-4096384:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:4114057-4114116:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4109415-4109519:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4108086-4108616:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4100341-4100499:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4099397-4099543:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:4098689-4098826:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:4097504-4097551:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:4096848-4096991:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:4093534-4096384:-1:exon

ZNF711
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 87175
gene: ZNF711
product: zinc finger protein 711, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 12 ESTs, 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XM_030967449.1
SIO_010081: ZNF711
subclass of: SO_0000673
so part of: ZNF711
location: complement(join(4093534..4096384,4096848..4096991,4097504..4097551,4098689..4098826,4099397..4099543,4100341..4100499,4104089..4104418))
location: region:4093534-4104418:-1
so has part: feature:4104089-4104418:-1:exon
so has part: feature:4100341-4100499:-1:exon
so has part: feature:4099397-4099543:-1:exon
so has part: feature:4098689-4098826:-1:exon
so has part: feature:4097504-4097551:-1:exon
so has part: feature:4096848-4096991:-1:exon
so has part: feature:4093534-4096384:-1:exon

position:4104418:-1
position: 4104418
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4104089-4104418:-1:exon

position:4104089:-1
position: 4104089
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:4100341-4100499:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4099397-4099543:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4098689-4098826:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4097504-4097551:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:4096848-4096991:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:4093534-4096384:-1:exon

ZNF711
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 87175
gene: ZNF711
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: zinc finger protein 711 isoform X3
translation: MDPGGGSLGLQTQESKMPHTMIMQDFVAGMAGTAHIDGDHIVVSVPEAVLVSDVVTDDGITLDHGLAAEVVQGPDIITETDVVTEGVIVPDSVLEADVAIEEALDTSDHVLTSDLITETVRVPDQVFVADLVTGPEGHLEHVVQDAVAGADSPTMVSEEVLVTNSDSEAVIQAAGTVPGSTVTIKTEDDDDGKSTSEDYLMISLDDVGEKLDHIGSTPLKISTEVANDDVAKDDGFGSEVIKVYIFKAEAEDDVEIGCAEIADEVYMEVIVGEEEATSLPDTQLEDSGVNKTFVPVAWAAAYGDERRLPRRYEDGQAAGNNLDTRLENKNGNATQYLQICDSISTNRVLKQKTKKRRRGEARQWQTAVIIGPDGQPLTVYPCHICGKKFKSRGFLKRHMKNHPDHMIKKKYQCTDCDFTTNKKVSFHNHLESHKLINKVDKTHEFTEYTRRYREASPLSSNKLILRDKEPKLHKCKYCDYETAEQGLLNRHLLAVHSKNFPHVCVECGKGFRHPSELKKHMRTHTGEKPYQCQHCVFRCADQSNLKTHIKTKHGTDLPFKCEHCPQAFADEKELQQHTELFQGHKTHQCPHCDHKSTNSSDLKRHIISVHTKDFPHKCEVCEKGFHRPSELKKHSETHKGKKIHQCRHCDFKTSDPFVLSGHILSVHTKDLPFKCKRCKRGFRQQNELKKHMKTHSGRKVYQCQYCEYSTTDASGFKRHVISIHTKDYPHRCEFCKKGFRRPSEKNQHIMRHHKEAIM
SIO_010081: ZNF711
subclass of: SO_0000673
so part of: ZNF711
location: complement(join(4095207..4096384,4096848..4096991,4097504..4097551,4098689..4098826,4100341..4100499,4108086..4108616,4109415..4109493))
location: region:4095207-4109493:-1
so has part: feature:4109415-4109493:-1:exon
so has part: feature:4108086-4108616:-1:exon
so has part: feature:4100341-4100499:-1:exon
so has part: feature:4098689-4098826:-1:exon
so has part: feature:4097504-4097551:-1:exon
so has part: feature:4096848-4096991:-1:exon
so has part: feature:4095207-4096384:-1:exon

XP_030823308.1
type: Protein
SIO_000068: ncbiprotein

position:4095207:-1
position: 4095207
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4109493:-1
position: 4109493
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4109415-4109493:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4108086-4108616:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4100341-4100499:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4098689-4098826:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4097504-4097551:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:4096848-4096991:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:4095207-4096384:-1:exon

ZNF711
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 87175
gene: ZNF711
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: zinc finger protein 711 isoform X2
translation: MDPGGGSLGLQTQESKMPHTMIMQDFVAGMAGTAHIDGDHIVVSVPEAVLVSDVVTDDGITLDHGLAAEVVQGPDIITETDVVTEGVIVPDSVLEADVAIEEALDTSDHVLTSDLITETVRVPDQVFVADLVTGPEGHLEHVVQDAVAGADSPTMVSEEVLVTNSDSEAVIQAAGTVPGSTVTIKTEDDDDGKSTSEDYLMISLDDVGEKLDHIGSTPLKISTEVANDDVAKDDGFGSEVIKVYIFKAEAEDDVEIGGTEIVTESDFHNGHSVAGVIEQGGVGRMQREKMVYMAVKDSSQEDEDISCAEIADEVYMEVIVGEEEATSLPDTQLEDSGVNKTFVPVAWAAAYGDERRLPRRYEDGQAAGNNLDTRLENKNAVIIGPDGQPLTVYPCHICGKKFKSRGFLKRHMKNHPDHMIKKKYQCTDCDFTTNKKVSFHNHLESHKLINKVDKTHEFTEYTRRYREASPLSSNKLILRDKEPKLHKCKYCDYETAEQGLLNRHLLAVHSKNFPHVCVECGKGFRHPSELKKHMRTHTGEKPYQCQHCVFRCADQSNLKTHIKTKHGTDLPFKCEHCPQAFADEKELQQHTELFQGHKTHQCPHCDHKSTNSSDLKRHIISVHTKDFPHKCEVCEKGFHRPSELKKHSETHKGKKIHQCRHCDFKTSDPFVLSGHILSVHTKDLPFKCKRCKRGFRQQNELKKHMKTHSGRKVYQCQYCEYSTTDASGFKRHVISIHTKDYPHRCEFCKKGFRRPSEKNQHIMRHHKEAIM
SIO_010081: ZNF711
subclass of: SO_0000673
so part of: ZNF711
location: complement(join(4095207..4096384,4096956..4096991,4097504..4097551,4098689..4098826,4099397..4099543,4100341..4100499,4108086..4108616,4109415..4109493))
location: region:4095207-4109493:-1
so has part: feature:4109415-4109493:-1:exon
so has part: feature:4108086-4108616:-1:exon
so has part: feature:4100341-4100499:-1:exon
so has part: feature:4099397-4099543:-1:exon
so has part: feature:4098689-4098826:-1:exon
so has part: feature:4097504-4097551:-1:exon
so has part: feature:4096956-4096991:-1:exon
so has part: feature:4095207-4096384:-1:exon

XP_030823307.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:4109415-4109493:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4108086-4108616:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4100341-4100499:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4099397-4099543:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4098689-4098826:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:4097504-4097551:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:4096956-4096991:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:4095207-4096384:-1:exon

ZNF711
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 87175
gene: ZNF711
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: zinc finger protein 711 isoform X1
translation: MDPGGGSLGLQTQESKMPHTMIMQDFVAGMAGTAHIDGDHIVVSVPEAVLVSDVVTDDGITLDHGLAAEVVQGPDIITETDVVTEGVIVPDSVLEADVAIEEALDTSDHVLTSDLITETVRVPDQVFVADLVTGPEGHLEHVVQDAVAGADSPTMVSEEVLVTNSDSEAVIQAAGTVPGSTVTIKTEDDDDGKSTSEDYLMISLDDVGEKLDHIGSTPLKISTEVANDDVAKDDGFGSEVIKVYIFKAEAEDDVEIGGTEIVTESDFHNGHSVAGVIEQGGVGRMQREKMVYMAVKDSSQEDEDISCAEIADEVYMEVIVGEEEATSLPDTQLEDSGVNKTFVPVAWAAAYGDERRLPRRYEDGQAAGNNLDTRLENKNGNATQYLQICDSISTNRVLKQKTKKRRRGEARQWQTAVIIGPDGQPLTVYPCHICGKKFKSRGFLKRHMKNHPDHMIKKKYQCTDCDFTTNKKVSFHNHLESHKLINKVDKTHEFTEYTRRYREASPLSSNKLILRDKEPKLHKCKYCDYETAEQGLLNRHLLAVHSKNFPHVCVECGKGFRHPSELKKHMRTHTGEKPYQCQHCVFRCADQSNLKTHIKTKHGTDLPFKCEHCPQAFADEKELQQHTELFQGHKTHQCPHCDHKSTNSSDLKRHIISVHTKDFPHKCEVCEKGFHRPSELKKHSETHKGKKIHQCRHCDFKTSDPFVLSGHILSVHTKDLPFKCKRCKRGFRQQNELKKHMKTHSGRKVYQCQYCEYSTTDASGFKRHVISIHTKDYPHRCEFCKKGFRRPSEKNQHIMRHHKEAIM
SIO_010081: ZNF711
subclass of: SO_0000673
so part of: ZNF711
location: complement(join(4095207..4096384,4096848..4096991,4097504..4097551,4098689..4098826,4099397..4099543,4100341..4100499,4108086..4108616,4109415..4109493))
location: region:4095207-4109493:-1
so has part: feature:4109415-4109493:-1:exon
so has part: feature:4108086-4108616:-1:exon
so has part: feature:4100341-4100499:-1:exon
so has part: feature:4099397-4099543:-1:exon
so has part: feature:4098689-4098826:-1:exon
so has part: feature:4097504-4097551:-1:exon
so has part: feature:4096848-4096991:-1:exon
so has part: feature:4095207-4096384:-1:exon

XP_030823306.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:4109415-4109493:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4108086-4108616:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4100341-4100499:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4099397-4099543:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4098689-4098826:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:4097504-4097551:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:4096848-4096991:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:4095207-4096384:-1:exon

ZNF711
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 87175
gene: ZNF711
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: zinc finger protein 711 isoform X4
translation: MDWELAIHGESGHHTPENSLAVDDVGEKLDHIGSTPLKISTEVANDDVAKDDGFGSEVIKVYIFKAEAEDDVEIGGTEIVTESDFHNGHSVAGVIEQGGVGRMQREKMVYMAVKDSSQEDEDISCAEIADEVYMEVIVGEEEATSLPDTQLEDSGVNKTFVPVAWAAAYGDERRLPRRYEDGQAAGNNLDTRLENKNGNATQYLQICDSISTNRVLKQKTKKRRRGEARQWQTAVIIGPDGQPLTVYPCHICGKKFKSRGFLKRHMKNHPDHMIKKKYQCTDCDFTTNKKVSFHNHLESHKLINKVDKTHEFTEYTRRYREASPLSSNKLILRDKEPKLHKCKYCDYETAEQGLLNRHLLAVHSKNFPHVCVECGKGFRHPSELKKHMRTHTGEKPYQCQHCVFRCADQSNLKTHIKTKHGTDLPFKCEHCPQAFADEKELQQHTELFQGHKTHQCPHCDHKSTNSSDLKRHIISVHTKDFPHKCEVCEKGFHRPSELKKHSETHKGKKIHQCRHCDFKTSDPFVLSGHILSVHTKDLPFKCKRCKRGFRQQNELKKHMKTHSGRKVYQCQYCEYSTTDASGFKRHVISIHTKDYPHRCEFCKKGFRRPSEKNQHIMRHHKEAIM
SIO_010081: ZNF711
subclass of: SO_0000673
so part of: ZNF711
location: complement(join(4095207..4096384,4096848..4096991,4097504..4097551,4098689..4098826,4099397..4099543,4100341..4100499,4104089..4104152))
location: region:4095207-4104152:-1
so has part: feature:4104089-4104152:-1:exon
so has part: feature:4100341-4100499:-1:exon
so has part: feature:4099397-4099543:-1:exon
so has part: feature:4098689-4098826:-1:exon
so has part: feature:4097504-4097551:-1:exon
so has part: feature:4096848-4096991:-1:exon
so has part: feature:4095207-4096384:-1:exon

XP_030823309.1
type: Protein
SIO_000068: ncbiprotein

position:4104152:-1
position: 4104152
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4104089-4104152:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4100341-4100499:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4099397-4099543:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4098689-4098826:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4097504-4097551:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:4096848-4096991:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:4095207-4096384:-1:exon

APOOL
type: Gene
subclass of: SO_0000704
RO_0002162: 87175
gene: APOOL
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(4125356..4139164)
location: region:4125356-4139164:-1
so has part: feature:4125356-4139164:-1:exon
subclass of: SO_0000010

115915005
type: Gene
SIO_000068: ncbigene

position:4125356:-1
position: 4125356
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4139164:-1
position: 4139164
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4125356-4139164:-1:exon

APOOL
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 87175
gene: APOOL
product: apolipoprotein O like, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XM_030967917.1
SIO_010081: APOOL
subclass of: SO_0000673
so part of: APOOL
location: complement(join(4125356..4129414,4131096..4131252,4132808..4132894,4133243..4133334,4133643..4133741,4133888..4133942,4134976..4135095,4135847..4135951,4139110..4139164))
location: region:4125356-4139164:-1
so has part: feature:4139110-4139164:-1:exon
so has part: feature:4135847-4135951:-1:exon
so has part: feature:4134976-4135095:-1:exon
so has part: feature:4133888-4133942:-1:exon
so has part: feature:4133643-4133741:-1:exon
so has part: feature:4133243-4133334:-1:exon
so has part: feature:4132808-4132894:-1:exon
so has part: feature:4131096-4131252:-1:exon
so has part: feature:4125356-4129414:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:4139110-4139164:-1:exon

position:4139110:-1
position: 4139110
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:4135847-4135951:-1:exon

position:4135847:-1
position: 4135847
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4135951:-1
position: 4135951
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:4134976-4135095:-1:exon

position:4134976:-1
position: 4134976
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4135095:-1
position: 4135095
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:4133888-4133942:-1:exon

position:4133888:-1
position: 4133888
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4133942:-1
position: 4133942
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:4133643-4133741:-1:exon

position:4133643:-1
position: 4133643
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4133741:-1
position: 4133741
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:4133243-4133334:-1:exon

position:4133243:-1
position: 4133243
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4133334:-1
position: 4133334
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:4132808-4132894:-1:exon

position:4132808:-1
position: 4132808
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4132894:-1
position: 4132894
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:4131096-4131252:-1:exon

position:4131096:-1
position: 4131096
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4131252:-1
position: 4131252
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:4125356-4129414:-1:exon

position:4129414:-1
position: 4129414
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

APOOL
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 87175
gene: APOOL
product: apolipoprotein O like, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_030967916.1
SIO_010081: APOOL
subclass of: SO_0000673
so part of: APOOL
location: complement(join(4125356..4129414,4131096..4131252,4132808..4132894,4133243..4133334,4133643..4133741,4133888..4133942,4134976..4135095,4135847..4135951,4137457..4137851))
location: region:4125356-4137851:-1
so has part: feature:4137457-4137851:-1:exon
so has part: feature:4135847-4135951:-1:exon
so has part: feature:4134976-4135095:-1:exon
so has part: feature:4133888-4133942:-1:exon
so has part: feature:4133643-4133741:-1:exon
so has part: feature:4133243-4133334:-1:exon
so has part: feature:4132808-4132894:-1:exon
so has part: feature:4131096-4131252:-1:exon
so has part: feature:4125356-4129414:-1:exon

position:4137851:-1
position: 4137851
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4137457-4137851:-1:exon

position:4137457:-1
position: 4137457
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:4135847-4135951:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4134976-4135095:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4133888-4133942:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4133643-4133741:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:4133243-4133334:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:4132808-4132894:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:4131096-4131252:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:4125356-4129414:-1:exon

APOOL
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 87175
gene: APOOL
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: MICOS complex subunit MIC27 isoform X2
translation: MAAKVAKLAAVSSGLPFICITVYAATEKESKSQLVKPDKLPIYSAPPLTSRYIEEQPGPLQQQLTALRRTTGHYFGWCQSVYVFIKNGIMDSIQFGKDAYVYLNNPPPEFLPKAAVITVSGLAGAVLARKGSRFKKIAYPLGLTTVGYAVCYPAQSVVIAKVTGKKLRYASHQTYEAVRSLWADKETVTKLQQESKPIMQEDKKKKGISSTKPESAVESGSFNRTESFPVKCRSNEDPVPSSGTVKKSKFKPDPKLADHGQSSPEDVDMYSTRS
SIO_010081: APOOL
subclass of: SO_0000673
so part of: APOOL
location: complement(join(4129317..4129414,4131096..4131252,4132808..4132894,4133243..4133334,4133643..4133741,4133888..4133942,4134976..4135095,4135847..4135951,4139110..4139121))
location: region:4129317-4139121:-1
so has part: feature:4139110-4139121:-1:exon
so has part: feature:4135847-4135951:-1:exon
so has part: feature:4134976-4135095:-1:exon
so has part: feature:4133888-4133942:-1:exon
so has part: feature:4133643-4133741:-1:exon
so has part: feature:4133243-4133334:-1:exon
so has part: feature:4132808-4132894:-1:exon
so has part: feature:4131096-4131252:-1:exon
so has part: feature:4129317-4129414:-1:exon

XP_030823777.1
type: Protein
SIO_000068: ncbiprotein

position:4129317:-1
position: 4129317
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4139121:-1
position: 4139121
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4139110-4139121:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4135847-4135951:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4134976-4135095:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4133888-4133942:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4133643-4133741:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:4133243-4133334:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:4132808-4132894:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:4131096-4131252:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:4129317-4129414:-1:exon

APOOL
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 87175
gene: APOOL
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: MICOS complex subunit MIC27 isoform X1
translation: MQRIKAKIIQVAKLAAVSSGLPFICITVYAATEKESKSQLVKPDKLPIYSAPPLTSRYIEEQPGPLQQQLTALRRTTGHYFGWCQSVYVFIKNGIMDSIQFGKDAYVYLNNPPPEFLPKAAVITVSGLAGAVLARKGSRFKKIAYPLGLTTVGYAVCYPAQSVVIAKVTGKKLRYASHQTYEAVRSLWADKETVTKLQQESKPIMQEDKKKKGISSTKPESAVESGSFNRTESFPVKCRSNEDPVPSSGTVKKSKFKPDPKLADHGQSSPEDVDMYSTRS
SIO_010081: APOOL
subclass of: SO_0000673
so part of: APOOL
location: complement(join(4129317..4129414,4131096..4131252,4132808..4132894,4133243..4133334,4133643..4133741,4133888..4133942,4134976..4135095,4135847..4135951,4137457..4137486))
location: region:4129317-4137486:-1
so has part: feature:4137457-4137486:-1:exon
so has part: feature:4135847-4135951:-1:exon
so has part: feature:4134976-4135095:-1:exon
so has part: feature:4133888-4133942:-1:exon
so has part: feature:4133643-4133741:-1:exon
so has part: feature:4133243-4133334:-1:exon
so has part: feature:4132808-4132894:-1:exon
so has part: feature:4131096-4131252:-1:exon
so has part: feature:4129317-4129414:-1:exon

XP_030823776.1
type: Protein
SIO_000068: ncbiprotein

position:4137486:-1
position: 4137486
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4137457-4137486:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4135847-4135951:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4134976-4135095:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4133888-4133942:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4133643-4133741:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:4133243-4133334:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:4132808-4132894:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:4131096-4131252:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:4129317-4129414:-1:exon

LOC115914760
type: Gene
subclass of: SO_0000704
RO_0002162: 87175
gene: LOC115914760
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(4146660..4308559)
location: region:4146660-4308559:-1
so has part: feature:4146660-4308559:-1:exon
subclass of: SO_0000010

115914760
type: Gene
SIO_000068: ncbigene

position:4146660:-1
position: 4146660
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4308559:-1
position: 4308559
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4146660-4308559:-1:exon

LOC115914760
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 87175
gene: LOC115914760
product: connector enhancer of kinase suppressor of ras 2-like
exception: unclassified transcription discrepancy
note: The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: inserted 2 bases in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 Proteins, and 88% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_030967499.1
SIO_010081: LOC115914760
subclass of: SO_0000673
so part of: LOC115914760
location: complement(join(4146660..4147012,4147659..4147858,4148148..4148655,4149960..4150063,4150790..4150860,4160722..4160793,4166188..4166261,4167632..4167807,4168899..4168947,4172015..4172063,4176567..4176601,4186235..4186489,4188458..4188543,4192220..4192425,4192979..4193112,4197019..4197165,4205833..4205901,4209596..4209655,4218506..4218625,4221054..4221095,4227351..4227438,4228704..4228906,4249600..4249763,4308190..4308263,4308521..4308559))
location: region:4146660-4308559:-1
so has part: feature:4308521-4308559:-1:exon
so has part: feature:4308190-4308263:-1:exon
so has part: feature:4249600-4249763:-1:exon
so has part: feature:4228704-4228906:-1:exon
so has part: feature:4227351-4227438:-1:exon
so has part: feature:4221054-4221095:-1:exon
so has part: feature:4218506-4218625:-1:exon
so has part: feature:4209596-4209655:-1:exon
so has part: feature:4205833-4205901:-1:exon
so has part: feature:4197019-4197165:-1:exon
so has part: feature:4192979-4193112:-1:exon
so has part: feature:4192220-4192425:-1:exon
so has part: feature:4188458-4188543:-1:exon
so has part: feature:4186235-4186489:-1:exon
so has part: feature:4176567-4176601:-1:exon
so has part: feature:4172015-4172063:-1:exon
so has part: feature:4168899-4168947:-1:exon
so has part: feature:4167632-4167807:-1:exon
so has part: feature:4166188-4166261:-1:exon
so has part: feature:4160722-4160793:-1:exon
so has part: feature:4150790-4150860:-1:exon
so has part: feature:4149960-4150063:-1:exon
so has part: feature:4148148-4148655:-1:exon
so has part: feature:4147659-4147858:-1:exon
so has part: feature:4146660-4147012:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:4308521-4308559:-1:exon

position:4308521:-1
position: 4308521
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:4308190-4308263:-1:exon

position:4308190:-1
position: 4308190
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4308263:-1
position: 4308263
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:4249600-4249763:-1:exon

position:4249600:-1
position: 4249600
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4249763:-1
position: 4249763
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:4228704-4228906:-1:exon

position:4228704:-1
position: 4228704
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4228906:-1
position: 4228906
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:4227351-4227438:-1:exon

position:4227351:-1
position: 4227351
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4227438:-1
position: 4227438
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:4221054-4221095:-1:exon

position:4221054:-1
position: 4221054
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4221095:-1
position: 4221095
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:4218506-4218625:-1:exon

position:4218506:-1
position: 4218506
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4218625:-1
position: 4218625
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:4209596-4209655:-1:exon

position:4209596:-1
position: 4209596
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4209655:-1
position: 4209655
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:4205833-4205901:-1:exon

position:4205833:-1
position: 4205833
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4205901:-1
position: 4205901
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:4197019-4197165:-1:exon

position:4197019:-1
position: 4197019
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4197165:-1
position: 4197165
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:4192979-4193112:-1:exon

position:4192979:-1
position: 4192979
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4193112:-1
position: 4193112
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:4192220-4192425:-1:exon

position:4192220:-1
position: 4192220
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4192425:-1
position: 4192425
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:4188458-4188543:-1:exon

position:4188458:-1
position: 4188458
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4188543:-1
position: 4188543
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:4186235-4186489:-1:exon

position:4186235:-1
position: 4186235
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4186489:-1
position: 4186489
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:4176567-4176601:-1:exon

position:4176567:-1
position: 4176567
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4176601:-1
position: 4176601
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:4172015-4172063:-1:exon

position:4172015:-1
position: 4172015
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4172063:-1
position: 4172063
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:4168899-4168947:-1:exon

position:4168899:-1
position: 4168899
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4168947:-1
position: 4168947
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:4167632-4167807:-1:exon

position:4167632:-1
position: 4167632
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4167807:-1
position: 4167807
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:4166188-4166261:-1:exon

position:4166188:-1
position: 4166188
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4166261:-1
position: 4166261
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:4160722-4160793:-1:exon

position:4160722:-1
position: 4160722
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4160793:-1
position: 4160793
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:4150790-4150860:-1:exon

position:4150790:-1
position: 4150790
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4150860:-1
position: 4150860
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 22
SIO_000628: feature:4149960-4150063:-1:exon

position:4149960:-1
position: 4149960
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4150063:-1
position: 4150063
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 23
SIO_000628: feature:4148148-4148655:-1:exon

position:4148148:-1
position: 4148148
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4148655:-1
position: 4148655
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 24
SIO_000628: feature:4147659-4147858:-1:exon

position:4147659:-1
position: 4147659
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4147858:-1
position: 4147858
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 25
SIO_000628: feature:4146660-4147012:-1:exon

position:4147012:-1
position: 4147012
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC115914760
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 87175
gene: LOC115914760
exception: unclassified translation discrepancy
note: The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: inserted 2 bases in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: LOW QUALITY PROTEIN: connector enhancer of kinase suppressor of ras 2-like
translation: MFDPCRXLGGHRLCDLMMALVMEPISKWTPKQVVDWMKGLDDCLQQYIKNFEREKINGEQLLHITHQELEELGVTRIGHQELILEAVDLLCALNYGLETENLRTLSHKLNASAKNLQNFITGRRRSGHYDGRASRRLPNDFLTSVVDLIGAAKNLLAWLDRSPFVSVTEYSLLKNNIVQLCLELTTIVQQDCTVYETENKILHVCKTLSGICDHIISLSSDSLVSQSAHLEVVHLTSIMPSEGLGMYIKSTYDGLHVITGTTENSPADQCKKIHAGDEVIQVNHQTVVGWQLKNLVNALWEDPNGVILTLKKRPQNTLVSAPALLKNVRWKPLALQPVIPTSPTSSSTTPTSTMGMSSKMDNSALQDVFILSPMSGLYGPRDEIGIMSCDDISKFGKSGMKGSESPNYFLEHESGKFYTLIEGEGPPGGSEYERSRAPGVRRREKTPTHGDLRPVSMPTEYSWIGEPKEQNMYKRGSRDSENSLLRYLSDDKILVIQEEPLAQKDSKRDTARRSRRKGKGPGTPGFPISPSVLASTMSIRMEPGQQDVLGFSLAENNTVPLYHRAGDTVSGDTERYASSAIDHPGNTSMRKSFHYASLRVKSRKWSKGSSLSSVSRRRISCKDLGHGDCEGWLWKKKDAKGYFTQKWKKYWFILKDSSLYWYTNQNDEKAEGFISLPEFRIDRAIECRRKHAFKACHPKIKSFYFATDCLEEMNRWMNRLGLAAIGYTPDDKDIHPDEADYWSESDQDDIEGSLTLKQEGSSTLCDTYHRTPSVNSSSPFPEAKQGRHFSSESTYSQSSAEDSRPEVAGSTHSSGCRPPYRERRSWQDLIETPLTSSGLHFLQTVPPEAEYVSGRPGMSPDRRRQATLPVQRRHNFEQDGPFPLVECPRGHSSHGRPQKPRSQSLPRNRDVRGKGRVKSIEDTDDSLDEKVPLRRHNSFSAEENVKEIEEITDGLQALYRTLEEASLSAFGEQRPSTKQEFRKSFVKRCNDPVINEKLHHIRVLKSTLKAKEGDLTVINSLLDDPNLTSKKFKDWKLKNYEFFLDICEYSAAGKSQNGASELASSAPMLTHTHSFIETHV
SIO_010081: LOC115914760
subclass of: SO_0000673
so part of: LOC115914760
location: complement(join(4146797..4147012,4147659..4147858,4148148..4148655,4149960..4150063,4150790..4150860,4160722..4160793,4166188..4166261,4167632..4167807,4168899..4168947,4172015..4172063,4176567..4176601,4186235..4186489,4188458..4188543,4192220..4192425,4192979..4193112,4197019..4197165,4205833..4205901,4209596..4209655,4218506..4218625,4221054..4221095,4227351..4227438,4228704..4228906,4249600..4249763,4308190..4308263,4308521..4308559))
location: region:4146797-4308559:-1
so has part: feature:4308521-4308559:-1:exon
so has part: feature:4308190-4308263:-1:exon
so has part: feature:4249600-4249763:-1:exon
so has part: feature:4228704-4228906:-1:exon
so has part: feature:4227351-4227438:-1:exon
so has part: feature:4221054-4221095:-1:exon
so has part: feature:4218506-4218625:-1:exon
so has part: feature:4209596-4209655:-1:exon
so has part: feature:4205833-4205901:-1:exon
so has part: feature:4197019-4197165:-1:exon
so has part: feature:4192979-4193112:-1:exon
so has part: feature:4192220-4192425:-1:exon
so has part: feature:4188458-4188543:-1:exon
so has part: feature:4186235-4186489:-1:exon
so has part: feature:4176567-4176601:-1:exon
so has part: feature:4172015-4172063:-1:exon
so has part: feature:4168899-4168947:-1:exon
so has part: feature:4167632-4167807:-1:exon
so has part: feature:4166188-4166261:-1:exon
so has part: feature:4160722-4160793:-1:exon
so has part: feature:4150790-4150860:-1:exon
so has part: feature:4149960-4150063:-1:exon
so has part: feature:4148148-4148655:-1:exon
so has part: feature:4147659-4147858:-1:exon
so has part: feature:4146797-4147012:-1:exon

XP_030823359.1
type: Protein
SIO_000068: ncbiprotein

position:4146797:-1
position: 4146797
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4308521-4308559:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4308190-4308263:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4249600-4249763:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4228704-4228906:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4227351-4227438:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:4221054-4221095:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:4218506-4218625:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:4209596-4209655:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:4205833-4205901:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:4197019-4197165:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:4192979-4193112:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:4192220-4192425:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:4188458-4188543:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:4186235-4186489:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:4176567-4176601:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:4172015-4172063:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:4168899-4168947:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:4167632-4167807:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:4166188-4166261:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:4160722-4160793:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:4150790-4150860:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:4149960-4150063:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:4148148-4148655:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:4147659-4147858:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:4146797-4147012:-1:exon

HDX
type: Gene
subclass of: SO_0000704
RO_0002162: 87175
gene: HDX
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 4327743..4363245
location: region:4327743-4363245:1
so has part: feature:4327743-4363245:1:exon
subclass of: SO_0000010

115914825
type: Gene
SIO_000068: ncbigene

position:4327743:1
position: 4327743
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4363245:1
position: 4363245
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4327743-4363245:1:exon

HDX
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 87175
gene: HDX
product: highly divergent homeobox, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, 7 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_030967607.1
SIO_010081: HDX
subclass of: SO_0000673
so part of: HDX
location: join(4327743..4327930,4331862..4331998,4336048..4336194,4338081..4339211,4342958..4343011,4351798..4351944,4355375..4355582,4358526..4358605,4360122..4360205,4362337..4362459,4362671..4363245)
location: region:4327743-4363245:1
so has part: feature:4327743-4327930:1:exon
so has part: feature:4331862-4331998:1:exon
so has part: feature:4336048-4336194:1:exon
so has part: feature:4338081-4339211:1:exon
so has part: feature:4342958-4343011:1:exon
so has part: feature:4351798-4351944:1:exon
so has part: feature:4355375-4355582:1:exon
so has part: feature:4358526-4358605:1:exon
so has part: feature:4360122-4360205:1:exon
so has part: feature:4362337-4362459:1:exon
so has part: feature:4362671-4363245:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:4327743-4327930:1:exon

position:4327930:1
position: 4327930
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:4331862-4331998:1:exon

position:4331862:1
position: 4331862
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4331998:1
position: 4331998
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:4336048-4336194:1:exon

position:4336048:1
position: 4336048
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4336194:1
position: 4336194
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:4338081-4339211:1:exon

position:4338081:1
position: 4338081
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4339211:1
position: 4339211
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:4342958-4343011:1:exon

position:4342958:1
position: 4342958
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4343011:1
position: 4343011
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:4351798-4351944:1:exon

position:4351798:1
position: 4351798
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4351944:1
position: 4351944
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:4355375-4355582:1:exon

position:4355375:1
position: 4355375
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4355582:1
position: 4355582
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:4358526-4358605:1:exon

position:4358526:1
position: 4358526
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4358605:1
position: 4358605
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:4360122-4360205:1:exon

position:4360122:1
position: 4360122
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4360205:1
position: 4360205
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:4362337-4362459:1:exon

position:4362337:1
position: 4362337
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4362459:1
position: 4362459
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:4362671-4363245:1:exon

position:4362671:1
position: 4362671
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

HDX
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 87175
gene: HDX
product: highly divergent homeobox, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XM_030967606.1
SIO_010081: HDX
subclass of: SO_0000673
so part of: HDX
location: join(4327743..4327930,4336048..4336194,4338081..4339211,4342958..4343011,4351798..4351944,4355375..4355582,4358526..4358605,4360122..4360205,4362337..4362459,4362671..4363245)
location: region:4327743-4363245:1
so has part: feature:4327743-4327930:1:exon
so has part: feature:4336048-4336194:1:exon
so has part: feature:4338081-4339211:1:exon
so has part: feature:4342958-4343011:1:exon
so has part: feature:4351798-4351944:1:exon
so has part: feature:4355375-4355582:1:exon
so has part: feature:4358526-4358605:1:exon
so has part: feature:4360122-4360205:1:exon
so has part: feature:4362337-4362459:1:exon
so has part: feature:4362671-4363245:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:4327743-4327930:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4336048-4336194:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4338081-4339211:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4342958-4343011:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4351798-4351944:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:4355375-4355582:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:4358526-4358605:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:4360122-4360205:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:4362337-4362459:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:4362671-4363245:1:exon

HDX
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 87175
gene: HDX
product: highly divergent homeobox, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_030967608.1
SIO_010081: HDX
subclass of: SO_0000673
so part of: HDX
location: join(4327743..4327930,4336048..4336194,4338081..4339211,4351798..4351944,4355375..4355582,4358526..4358605,4360122..4360205,4362337..4362459,4362671..4363245)
location: region:4327743-4363245:1
so has part: feature:4327743-4327930:1:exon
so has part: feature:4336048-4336194:1:exon
so has part: feature:4338081-4339211:1:exon
so has part: feature:4351798-4351944:1:exon
so has part: feature:4355375-4355582:1:exon
so has part: feature:4358526-4358605:1:exon
so has part: feature:4360122-4360205:1:exon
so has part: feature:4362337-4362459:1:exon
so has part: feature:4362671-4363245:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:4327743-4327930:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4336048-4336194:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4338081-4339211:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4351798-4351944:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4355375-4355582:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:4358526-4358605:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:4360122-4360205:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:4362337-4362459:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:4362671-4363245:1:exon

HDX
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 87175
gene: HDX
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: highly divergent homeobox isoform X1
translation: MNLRSVFTVEQQRILQRYYENGMTNQSKNCFQLILQCAQETKLDFSVVRTWVGNKRRKMSSKIAVESGGTPPGTAPATPSVPPEAAVRNVVNIARSQSQQSSWTSSNNDVIVTGIYSPAGSSGRPGAAKHTNASVAELHKTSIPRLPGKSDADFQQQHIPLGRQVQVPHCKNASLLVGEKTIILSRQTSVLNSANSIYSHTKKSYGSSSVQTAELVLPQKPMICHRPCRAEPLACQRLHKAEPAALAPHMAPGPRAHPREPGCGTQNLEIREVFSLAVTDQPQRLVPGSAAQKAPSLEGSCLSIAMETGDVEDEYAREEELASMGAQIQSYSRYCEGSGSGRGDNQSTAAAGPGRSGACGAQLGPARDGPDNLLYHSREFHLPARTSLHTASSTIYNPANAARSTFSPHFTSSSQLRLSQNQNNYQISGNLTVPWITGCSRKRALQDRTQFSDRDLATLKKYWDNGMTSLGSVCREKIEAVAAELNVDCEIVRTWIGNRRRKYRLMGIEVPPPRGGPADFSDQSEFVSKSALNPGEETAAEVGDDNDRNDEVSICLSEGSSQEETNEALQNEEIGHKDDDQHPVSTDNVKIEILDDEESDLISNSEVDQMSSLLDYKNEEVRFIESQLESHKQKYFELQTFTRSLILAIKADDKEQQQALLSDLPPELEEMDFNHTSPEPDDTSFSLSSLSEKNASDSL
SIO_010081: HDX
subclass of: SO_0000673
so part of: HDX
location: join(4336048..4336194,4338081..4339211,4342958..4343011,4351798..4351944,4355375..4355582,4358526..4358605,4360122..4360205,4362337..4362459,4362671..4362796)
location: region:4336048-4362796:1
so has part: feature:4336048-4336194:1:exon
so has part: feature:4338081-4339211:1:exon
so has part: feature:4342958-4343011:1:exon
so has part: feature:4351798-4351944:1:exon
so has part: feature:4355375-4355582:1:exon
so has part: feature:4358526-4358605:1:exon
so has part: feature:4360122-4360205:1:exon
so has part: feature:4362337-4362459:1:exon
so has part: feature:4362671-4362796:1:exon

XP_030823466.1
type: Protein
SIO_000068: ncbiprotein

position:4362796:1
position: 4362796
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4336048-4336194:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4338081-4339211:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4342958-4343011:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4351798-4351944:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4355375-4355582:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:4358526-4358605:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:4360122-4360205:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:4362337-4362459:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:4362671-4362796:1:exon

HDX
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 87175
gene: HDX
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: highly divergent homeobox isoform X1
translation: MNLRSVFTVEQQRILQRYYENGMTNQSKNCFQLILQCAQETKLDFSVVRTWVGNKRRKMSSKIAVESGGTPPGTAPATPSVPPEAAVRNVVNIARSQSQQSSWTSSNNDVIVTGIYSPAGSSGRPGAAKHTNASVAELHKTSIPRLPGKSDADFQQQHIPLGRQVQVPHCKNASLLVGEKTIILSRQTSVLNSANSIYSHTKKSYGSSSVQTAELVLPQKPMICHRPCRAEPLACQRLHKAEPAALAPHMAPGPRAHPREPGCGTQNLEIREVFSLAVTDQPQRLVPGSAAQKAPSLEGSCLSIAMETGDVEDEYAREEELASMGAQIQSYSRYCEGSGSGRGDNQSTAAAGPGRSGACGAQLGPARDGPDNLLYHSREFHLPARTSLHTASSTIYNPANAARSTFSPHFTSSSQLRLSQNQNNYQISGNLTVPWITGCSRKRALQDRTQFSDRDLATLKKYWDNGMTSLGSVCREKIEAVAAELNVDCEIVRTWIGNRRRKYRLMGIEVPPPRGGPADFSDQSEFVSKSALNPGEETAAEVGDDNDRNDEVSICLSEGSSQEETNEALQNEEIGHKDDDQHPVSTDNVKIEILDDEESDLISNSEVDQMSSLLDYKNEEVRFIESQLESHKQKYFELQTFTRSLILAIKADDKEQQQALLSDLPPELEEMDFNHTSPEPDDTSFSLSSLSEKNASDSL
SIO_010081: HDX
subclass of: SO_0000673
so part of: HDX
location: join(4336048..4336194,4338081..4339211,4342958..4343011,4351798..4351944,4355375..4355582,4358526..4358605,4360122..4360205,4362337..4362459,4362671..4362796)
location: region:4336048-4362796:1
so has part: feature:4336048-4336194:1:exon
so has part: feature:4338081-4339211:1:exon
so has part: feature:4342958-4343011:1:exon
so has part: feature:4351798-4351944:1:exon
so has part: feature:4355375-4355582:1:exon
so has part: feature:4358526-4358605:1:exon
so has part: feature:4360122-4360205:1:exon
so has part: feature:4362337-4362459:1:exon
so has part: feature:4362671-4362796:1:exon

XP_030823467.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:4336048-4336194:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4338081-4339211:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4342958-4343011:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4351798-4351944:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4355375-4355582:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:4358526-4358605:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:4360122-4360205:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:4362337-4362459:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:4362671-4362796:1:exon

HDX
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 87175
gene: HDX
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: highly divergent homeobox isoform X2
translation: MNLRSVFTVEQQRILQRYYENGMTNQSKNCFQLILQCAQETKLDFSVVRTWVGNKRRKMSSKIAVESGGTPPGTAPATPSVPPEAAVRNVVNIARSQSQQSSWTSSNNDVIVTGIYSPAGSSGRPGAAKHTNASVAELHKTSIPRLPGKSDADFQQQHIPLGRQVQVPHCKNASLLVGEKTIILSRQTSVLNSANSIYSHTKKSYGSSSVQTAELVLPQKPMICHRPCRAEPLACQRLHKAEPAALAPHMAPGPRAHPREPGCGTQNLEIREVFSLAVTDQPQRLVPGSAAQKAPSLEGSCLSIAMETGDVEDEYAREEELASMGAQIQSYSRYCEGSGSGRGDNQSTAAAGPGRSGACGAQLGPARDGPDNLLYHSREFHLPARTSLHTASSTIYNPANAARSTFSPHFTSSSQLRLSQNQNNYQLQDRTQFSDRDLATLKKYWDNGMTSLGSVCREKIEAVAAELNVDCEIVRTWIGNRRRKYRLMGIEVPPPRGGPADFSDQSEFVSKSALNPGEETAAEVGDDNDRNDEVSICLSEGSSQEETNEALQNEEIGHKDDDQHPVSTDNVKIEILDDEESDLISNSEVDQMSSLLDYKNEEVRFIESQLESHKQKYFELQTFTRSLILAIKADDKEQQQALLSDLPPELEEMDFNHTSPEPDDTSFSLSSLSEKNASDSL
SIO_010081: HDX
subclass of: SO_0000673
so part of: HDX
location: join(4336048..4336194,4338081..4339211,4351798..4351944,4355375..4355582,4358526..4358605,4360122..4360205,4362337..4362459,4362671..4362796)
location: region:4336048-4362796:1
so has part: feature:4336048-4336194:1:exon
so has part: feature:4338081-4339211:1:exon
so has part: feature:4351798-4351944:1:exon
so has part: feature:4355375-4355582:1:exon
so has part: feature:4358526-4358605:1:exon
so has part: feature:4360122-4360205:1:exon
so has part: feature:4362337-4362459:1:exon
so has part: feature:4362671-4362796:1:exon

XP_030823468.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:4336048-4336194:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4338081-4339211:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4351798-4351944:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4355375-4355582:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4358526-4358605:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:4360122-4360205:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:4362337-4362459:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:4362671-4362796:1:exon

RPS6KA6
type: Gene
subclass of: SO_0000704
RO_0002162: 87175
gene: RPS6KA6
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 4384943..4422061
location: region:4384943-4422061:1
so has part: feature:4384943-4422061:1:exon
subclass of: SO_0000010

115914714
type: Gene
SIO_000068: ncbigene

position:4384943:1
position: 4384943
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4422061:1
position: 4422061
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4384943-4422061:1:exon

RPS6KA6
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 87175
gene: RPS6KA6
product: ribosomal protein S6 kinase A6, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 11 ESTs, 17 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_030967400.1
SIO_010081: RPS6KA6
subclass of: SO_0000673
so part of: RPS6KA6
location: join(4384943..4385071,4393212..4393271,4396873..4396989,4399621..4399702,4400480..4400560,4401474..4401553,4404419..4404525,4404791..4404828,4405884..4406026,4406790..4406860,4408119..4408207,4408625..4408689,4410113..4410215,4411259..4411383,4411668..4411793,4412226..4412315,4412938..4413096,4413628..4413789,4414190..4414266,4414983..4415100,4416142..4416282,4417153..4422061)
location: region:4384943-4422061:1
so has part: feature:4384943-4385071:1:exon
so has part: feature:4393212-4393271:1:exon
so has part: feature:4396873-4396989:1:exon
so has part: feature:4399621-4399702:1:exon
so has part: feature:4400480-4400560:1:exon
so has part: feature:4401474-4401553:1:exon
so has part: feature:4404419-4404525:1:exon
so has part: feature:4404791-4404828:1:exon
so has part: feature:4405884-4406026:1:exon
so has part: feature:4406790-4406860:1:exon
so has part: feature:4408119-4408207:1:exon
so has part: feature:4408625-4408689:1:exon
so has part: feature:4410113-4410215:1:exon
so has part: feature:4411259-4411383:1:exon
so has part: feature:4411668-4411793:1:exon
so has part: feature:4412226-4412315:1:exon
so has part: feature:4412938-4413096:1:exon
so has part: feature:4413628-4413789:1:exon
so has part: feature:4414190-4414266:1:exon
so has part: feature:4414983-4415100:1:exon
so has part: feature:4416142-4416282:1:exon
so has part: feature:4417153-4422061:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:4384943-4385071:1:exon

position:4385071:1
position: 4385071
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:4393212-4393271:1:exon

position:4393212:1
position: 4393212
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4393271:1
position: 4393271
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:4396873-4396989:1:exon

position:4396873:1
position: 4396873
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4396989:1
position: 4396989
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:4399621-4399702:1:exon

position:4399621:1
position: 4399621
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4399702:1
position: 4399702
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:4400480-4400560:1:exon

position:4400480:1
position: 4400480
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4400560:1
position: 4400560
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:4401474-4401553:1:exon

position:4401474:1
position: 4401474
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4401553:1
position: 4401553
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:4404419-4404525:1:exon

position:4404419:1
position: 4404419
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4404525:1
position: 4404525
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:4404791-4404828:1:exon

position:4404791:1
position: 4404791
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4404828:1
position: 4404828
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:4405884-4406026:1:exon

position:4405884:1
position: 4405884
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4406026:1
position: 4406026
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:4406790-4406860:1:exon

position:4406790:1
position: 4406790
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4406860:1
position: 4406860
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:4408119-4408207:1:exon

position:4408119:1
position: 4408119
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4408207:1
position: 4408207
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:4408625-4408689:1:exon

position:4408625:1
position: 4408625
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4408689:1
position: 4408689
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:4410113-4410215:1:exon

position:4410113:1
position: 4410113
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4410215:1
position: 4410215
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:4411259-4411383:1:exon

position:4411259:1
position: 4411259
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4411383:1
position: 4411383
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:4411668-4411793:1:exon

position:4411668:1
position: 4411668
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4411793:1
position: 4411793
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:4412226-4412315:1:exon

position:4412226:1
position: 4412226
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4412315:1
position: 4412315
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:4412938-4413096:1:exon

position:4412938:1
position: 4412938
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4413096:1
position: 4413096
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:4413628-4413789:1:exon

position:4413628:1
position: 4413628
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4413789:1
position: 4413789
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:4414190-4414266:1:exon

position:4414190:1
position: 4414190
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4414266:1
position: 4414266
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:4414983-4415100:1:exon

position:4414983:1
position: 4414983
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4415100:1
position: 4415100
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:4416142-4416282:1:exon

position:4416142:1
position: 4416142
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4416282:1
position: 4416282
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 22
SIO_000628: feature:4417153-4422061:1:exon

position:4417153:1
position: 4417153
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

RPS6KA6
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 87175
gene: RPS6KA6
product: ribosomal protein S6 kinase A6, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 ESTs, 5 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XM_030967401.1
SIO_010081: RPS6KA6
subclass of: SO_0000673
so part of: RPS6KA6
location: join(4384943..4385071,4393212..4393271,4396873..4396989,4399621..4399702,4400480..4400560,4401474..4401553,4404419..4404525,4404791..4404828,4405884..4406026,4406790..4406860,4408119..4408207,4408625..4408689,4410113..4410215,4411259..4411383,4411671..4411793,4412226..4412315,4412938..4413096,4413628..4413789,4414190..4414266,4414983..4415100,4416142..4416282,4417153..4417416)
location: region:4384943-4417416:1
so has part: feature:4384943-4385071:1:exon
so has part: feature:4393212-4393271:1:exon
so has part: feature:4396873-4396989:1:exon
so has part: feature:4399621-4399702:1:exon
so has part: feature:4400480-4400560:1:exon
so has part: feature:4401474-4401553:1:exon
so has part: feature:4404419-4404525:1:exon
so has part: feature:4404791-4404828:1:exon
so has part: feature:4405884-4406026:1:exon
so has part: feature:4406790-4406860:1:exon
so has part: feature:4408119-4408207:1:exon
so has part: feature:4408625-4408689:1:exon
so has part: feature:4410113-4410215:1:exon
so has part: feature:4411259-4411383:1:exon
so has part: feature:4411671-4411793:1:exon
so has part: feature:4412226-4412315:1:exon
so has part: feature:4412938-4413096:1:exon
so has part: feature:4413628-4413789:1:exon
so has part: feature:4414190-4414266:1:exon
so has part: feature:4414983-4415100:1:exon
so has part: feature:4416142-4416282:1:exon
so has part: feature:4417153-4417416:1:exon

position:4417416:1
position: 4417416
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4384943-4385071:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4393212-4393271:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4396873-4396989:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4399621-4399702:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4400480-4400560:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:4401474-4401553:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:4404419-4404525:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:4404791-4404828:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:4405884-4406026:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:4406790-4406860:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:4408119-4408207:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:4408625-4408689:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:4410113-4410215:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:4411259-4411383:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:4411671-4411793:1:exon

position:4411671:1
position: 4411671
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:4412226-4412315:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:4412938-4413096:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:4413628-4413789:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:4414190-4414266:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:4414983-4415100:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:4416142-4416282:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:4417153-4417416:1:exon

RPS6KA6
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 87175
gene: RPS6KA6
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: ribosomal protein S6 kinase alpha-6 isoform X1
translation: MVPCAPLDDEPQPCHKMELYVSGAELNGLKMADEPMEEGEPYSYHDEGSVKEIPITHHVKEGCEKADPAQFELLKVLGQGSFGKVFLVRKIIGPDAGQLYAMKVLKKASLKVRDRVRTKMERDILVEVNHPFIVKLHYAFQTEGKLYLILDFLRGGDVFTRLSKEVMFTEEDVKFYLAELALALDHLHSLGIVYRDLKPENILLDEAGHIKLTDFGLSKESVDQEKKAYSFCGTVEYMAPEVVNRRGHNQSADWWSFGVLMFEMLTGTLPFQGKDRNETMNMILKAKLGMPQFLSPEAQSLLRMLFKRNPSNRLGAGSDGVEEIKRHPFFSTVDWNKLFRREIQPPFKPASGKPEDTFCFDPEFTAKTPKDSPGVPPSANAHQLFKGFSFVATTTVEDHKISPLTNILPIVQQLHGNSAQFTDVYELKEDIGVGSYSVCKRCIHIATNMEFAVKIIDKSKRDPSEEIEILMRYGQHPNIITLKDVYDDGRFIYLVTELMKGGELLDRILRQKFFSEREASAVLFTIAKTVDYLHCQGVVHRDLKPSNILYTDDSNNADSIRICDFGFAKQLRGENGLLLTPCYTANFVAPEVLMRQGYDAACDIWSLGVLLYTMLAGYTPFANGPNDTPEEILVRIGSGKFSLSGGNWDTVSDAAKDLLSHMLHVDPHQRYTAEQVLKHSWIACRDQLPHYQLNRQDAPHLVKGAMAATYSALNHKTFQPVLEPVAASSLAQRRSMKKLTSTDL
SIO_010081: RPS6KA6
subclass of: SO_0000673
so part of: RPS6KA6
location: join(4384997..4385071,4393212..4393271,4396873..4396989,4399621..4399702,4400480..4400560,4401474..4401553,4404419..4404525,4404791..4404828,4405884..4406026,4406790..4406860,4408119..4408207,4408625..4408689,4410113..4410215,4411259..4411383,4411668..4411793,4412226..4412315,4412938..4413096,4413628..4413789,4414190..4414266,4414983..4415100,4416142..4416282,4417153..4417278)
location: region:4384997-4417278:1
so has part: feature:4384997-4385071:1:exon
so has part: feature:4393212-4393271:1:exon
so has part: feature:4396873-4396989:1:exon
so has part: feature:4399621-4399702:1:exon
so has part: feature:4400480-4400560:1:exon
so has part: feature:4401474-4401553:1:exon
so has part: feature:4404419-4404525:1:exon
so has part: feature:4404791-4404828:1:exon
so has part: feature:4405884-4406026:1:exon
so has part: feature:4406790-4406860:1:exon
so has part: feature:4408119-4408207:1:exon
so has part: feature:4408625-4408689:1:exon
so has part: feature:4410113-4410215:1:exon
so has part: feature:4411259-4411383:1:exon
so has part: feature:4411668-4411793:1:exon
so has part: feature:4412226-4412315:1:exon
so has part: feature:4412938-4413096:1:exon
so has part: feature:4413628-4413789:1:exon
so has part: feature:4414190-4414266:1:exon
so has part: feature:4414983-4415100:1:exon
so has part: feature:4416142-4416282:1:exon
so has part: feature:4417153-4417278:1:exon

XP_030823260.1
type: Protein
SIO_000068: ncbiprotein

position:4384997:1
position: 4384997
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4417278:1
position: 4417278
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4384997-4385071:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4393212-4393271:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4396873-4396989:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4399621-4399702:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4400480-4400560:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:4401474-4401553:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:4404419-4404525:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:4404791-4404828:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:4405884-4406026:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:4406790-4406860:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:4408119-4408207:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:4408625-4408689:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:4410113-4410215:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:4411259-4411383:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:4411668-4411793:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:4412226-4412315:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:4412938-4413096:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:4413628-4413789:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:4414190-4414266:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:4414983-4415100:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:4416142-4416282:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:4417153-4417278:1:exon

RPS6KA6
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 87175
gene: RPS6KA6
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: ribosomal protein S6 kinase alpha-6 isoform X2
translation: MVPCAPLDDEPQPCHKMELYVSGAELNGLKMADEPMEEGEPYSYHDEGSVKEIPITHHVKEGCEKADPAQFELLKVLGQGSFGKVFLVRKIIGPDAGQLYAMKVLKKASLKVRDRVRTKMERDILVEVNHPFIVKLHYAFQTEGKLYLILDFLRGGDVFTRLSKEVMFTEEDVKFYLAELALALDHLHSLGIVYRDLKPENILLDEAGHIKLTDFGLSKESVDQEKKAYSFCGTVEYMAPEVVNRRGHNQSADWWSFGVLMFEMLTGTLPFQGKDRNETMNMILKAKLGMPQFLSPEAQSLLRMLFKRNPSNRLGAGSDGVEEIKRHPFFSTVDWNKLFRREIQPPFKPASGKPEDTFCFDPEFTAKTPKDSPGVPPSANAHQLFKGFSFVATTTVEDHKISPLTNILPIVQLHGNSAQFTDVYELKEDIGVGSYSVCKRCIHIATNMEFAVKIIDKSKRDPSEEIEILMRYGQHPNIITLKDVYDDGRFIYLVTELMKGGELLDRILRQKFFSEREASAVLFTIAKTVDYLHCQGVVHRDLKPSNILYTDDSNNADSIRICDFGFAKQLRGENGLLLTPCYTANFVAPEVLMRQGYDAACDIWSLGVLLYTMLAGYTPFANGPNDTPEEILVRIGSGKFSLSGGNWDTVSDAAKDLLSHMLHVDPHQRYTAEQVLKHSWIACRDQLPHYQLNRQDAPHLVKGAMAATYSALNHKTFQPVLEPVAASSLAQRRSMKKLTSTDL
SIO_010081: RPS6KA6
subclass of: SO_0000673
so part of: RPS6KA6
location: join(4384997..4385071,4393212..4393271,4396873..4396989,4399621..4399702,4400480..4400560,4401474..4401553,4404419..4404525,4404791..4404828,4405884..4406026,4406790..4406860,4408119..4408207,4408625..4408689,4410113..4410215,4411259..4411383,4411671..4411793,4412226..4412315,4412938..4413096,4413628..4413789,4414190..4414266,4414983..4415100,4416142..4416282,4417153..4417278)
location: region:4384997-4417278:1
so has part: feature:4384997-4385071:1:exon
so has part: feature:4393212-4393271:1:exon
so has part: feature:4396873-4396989:1:exon
so has part: feature:4399621-4399702:1:exon
so has part: feature:4400480-4400560:1:exon
so has part: feature:4401474-4401553:1:exon
so has part: feature:4404419-4404525:1:exon
so has part: feature:4404791-4404828:1:exon
so has part: feature:4405884-4406026:1:exon
so has part: feature:4406790-4406860:1:exon
so has part: feature:4408119-4408207:1:exon
so has part: feature:4408625-4408689:1:exon
so has part: feature:4410113-4410215:1:exon
so has part: feature:4411259-4411383:1:exon
so has part: feature:4411671-4411793:1:exon
so has part: feature:4412226-4412315:1:exon
so has part: feature:4412938-4413096:1:exon
so has part: feature:4413628-4413789:1:exon
so has part: feature:4414190-4414266:1:exon
so has part: feature:4414983-4415100:1:exon
so has part: feature:4416142-4416282:1:exon
so has part: feature:4417153-4417278:1:exon

XP_030823261.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:4384997-4385071:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4393212-4393271:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4396873-4396989:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4399621-4399702:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4400480-4400560:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:4401474-4401553:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:4404419-4404525:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:4404791-4404828:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:4405884-4406026:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:4406790-4406860:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:4408119-4408207:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:4408625-4408689:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:4410113-4410215:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:4411259-4411383:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:4411671-4411793:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:4412226-4412315:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:4412938-4413096:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:4413628-4413789:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:4414190-4414266:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:4414983-4415100:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:4416142-4416282:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:4417153-4417278:1:exon

POU3F4
type: Gene
subclass of: SO_0000704
RO_0002162: 87175
gene: POU3F4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(4456492..4459638)
location: region:4456492-4459638:-1
so has part: feature:4456492-4459638:-1:exon
subclass of: SO_0000010

115915025
type: Gene
SIO_000068: ncbigene

position:4456492:-1
position: 4456492
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4459638:-1
position: 4459638
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4456492-4459638:-1:exon

POU3F4
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 87175
gene: POU3F4
product: POU class 3 homeobox 4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 13 ESTs, 28 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_030967955.1
SIO_010081: POU3F4
subclass of: SO_0000673
so part of: POU3F4
location: complement(4456492..4459638)
location: region:4456492-4459638:-1
so has part: feature:4456492-4459638:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:4456492-4459638:-1:exon

POU3F4
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 87175
gene: POU3F4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: POU domain, class 3, transcription factor 4
translation: MATAASNPYGLLGAGALAHAEGAGMQQGSPFRSPQKLLQSEYLQGVPGNGHPLGHHWVTSLSDGAPWPAALAGGPLEQPDVKPGREDLQLGAIIHHRSPHVSHHSPHANHPSAWGASPAHSASLAAPPAAAAAAAGQPLSVYSQGGFAVGGMLEHGGLTPPPAAAAGQGLHPGLRGEAGGEHGELGGHHCQDHSDEETPTSDELEQFAKQFKQRRIKLGFTQADVGLALGTLYGNVFSQTTICRFEALQLSFKNMCKLKPLLNKWLEEADSSTGSPTSIDKIAAQGRKRKKRTSIEVSVKGVLETHFLKCPKPAAQEISSLADSLQLEKEVVRVWFCNRRQKEKRMTPPGEQPQHDVYSHGVKTDTACHDL
SIO_010081: POU3F4
subclass of: SO_0000673
so part of: POU3F4
location: complement(4458458..4459573)
location: region:4458458-4459573:-1
so has part: feature:4458458-4459573:-1:exon

XP_030823815.1
type: Protein
SIO_000068: ncbiprotein

position:4458458:-1
position: 4458458
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4459573:-1
position: 4459573
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4458458-4459573:-1:exon

LOC115914707
type: Gene
subclass of: SO_0000704
RO_0002162: 87175
gene: LOC115914707
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 4460541..4546138
location: region:4460541-4546138:1
so has part: feature:4460541-4546138:1:exon
subclass of: SO_0000010

115914707
type: Gene
SIO_000068: ncbigene

position:4460541:1
position: 4460541
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4546138:1
position: 4546138
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4460541-4546138:1:exon

LOC115914707
type: Miscellaneous RNA
subclass of: SO_0000673
RO_0002162: 87175
gene: LOC115914707
product: uncharacterized LOC115914707, transcript variant X5
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 ESTs, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XR_004061446.1
SIO_010081: LOC115914707
so part of: LOC115914707
location: join(4460541..4460814,4485616..4485737,4509792..4509896,4511486..4511575,4530215..4530604,4536302..4536735,4538289..4538601,4538707..4539430,4544996..4546138)
location: region:4460541-4546138:1
so has part: feature:4460541-4460814:1:exon
so has part: feature:4485616-4485737:1:exon
so has part: feature:4509792-4509896:1:exon
so has part: feature:4511486-4511575:1:exon
so has part: feature:4530215-4530604:1:exon
so has part: feature:4536302-4536735:1:exon
so has part: feature:4538289-4538601:1:exon
so has part: feature:4538707-4539430:1:exon
so has part: feature:4544996-4546138:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:4460541-4460814:1:exon

position:4460814:1
position: 4460814
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:4485616-4485737:1:exon

position:4485616:1
position: 4485616
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4485737:1
position: 4485737
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:4509792-4509896:1:exon

position:4509792:1
position: 4509792
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4509896:1
position: 4509896
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:4511486-4511575:1:exon

position:4511486:1
position: 4511486
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4511575:1
position: 4511575
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:4530215-4530604:1:exon

position:4530215:1
position: 4530215
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4530604:1
position: 4530604
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:4536302-4536735:1:exon

position:4536302:1
position: 4536302
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4536735:1
position: 4536735
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:4538289-4538601:1:exon

position:4538289:1
position: 4538289
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4538601:1
position: 4538601
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:4538707-4539430:1:exon

position:4538707:1
position: 4538707
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4539430:1
position: 4539430
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:4544996-4546138:1:exon

position:4544996:1
position: 4544996
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC115914707
type: Miscellaneous RNA
subclass of: SO_0000673
RO_0002162: 87175
gene: LOC115914707
product: uncharacterized LOC115914707, transcript variant X6
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XR_004061447.1
SIO_010081: LOC115914707
so part of: LOC115914707
location: join(4460541..4460814,4485616..4485737,4509792..4509896,4511486..4511575,4530215..4530604,4536302..4536735,4538289..4538601,4538707..4538747,4539149..4539430,4544996..4546138)
location: region:4460541-4546138:1
so has part: feature:4460541-4460814:1:exon
so has part: feature:4485616-4485737:1:exon
so has part: feature:4509792-4509896:1:exon
so has part: feature:4511486-4511575:1:exon
so has part: feature:4530215-4530604:1:exon
so has part: feature:4536302-4536735:1:exon
so has part: feature:4538289-4538601:1:exon
so has part: feature:4538707-4538747:1:exon
so has part: feature:4539149-4539430:1:exon
so has part: feature:4544996-4546138:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:4460541-4460814:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4485616-4485737:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4509792-4509896:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4511486-4511575:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4530215-4530604:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:4536302-4536735:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:4538289-4538601:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:4538707-4538747:1:exon

position:4538747:1
position: 4538747
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:4539149-4539430:1:exon

position:4539149:1
position: 4539149
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:4544996-4546138:1:exon

LOC115914707
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 87175
gene: LOC115914707
product: uncharacterized LOC115914707, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 ESTs, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_030967377.1
SIO_010081: LOC115914707
subclass of: SO_0000673
so part of: LOC115914707
location: join(4463220..4463442,4485616..4485737,4509792..4509906,4511490..4511575,4527416..4527554,4530215..4530604,4536302..4536735,4538289..4538601,4538707..4539147)
location: region:4463220-4539147:1
so has part: feature:4463220-4463442:1:exon
so has part: feature:4485616-4485737:1:exon
so has part: feature:4509792-4509906:1:exon
so has part: feature:4511490-4511575:1:exon
so has part: feature:4527416-4527554:1:exon
so has part: feature:4530215-4530604:1:exon
so has part: feature:4536302-4536735:1:exon
so has part: feature:4538289-4538601:1:exon
so has part: feature:4538707-4539147:1:exon

position:4463220:1
position: 4463220
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4539147:1
position: 4539147
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4463220-4463442:1:exon

position:4463442:1
position: 4463442
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:4485616-4485737:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4509792-4509906:1:exon

position:4509906:1
position: 4509906
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:4511490-4511575:1:exon

position:4511490:1
position: 4511490
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:4527416-4527554:1:exon

position:4527416:1
position: 4527416
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4527554:1
position: 4527554
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:4530215-4530604:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:4536302-4536735:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:4538289-4538601:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:4538707-4539147:1:exon

LOC115914707
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 87175
gene: LOC115914707
product: uncharacterized LOC115914707, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 ESTs, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_030967379.1
SIO_010081: LOC115914707
subclass of: SO_0000673
so part of: LOC115914707
location: join(4463220..4463442,4485616..4485737,4509792..4509906,4511490..4511575,4527416..4527554,4530215..4530604,4536302..4536589,4538289..4538601,4538707..4539147)
location: region:4463220-4539147:1
so has part: feature:4463220-4463442:1:exon
so has part: feature:4485616-4485737:1:exon
so has part: feature:4509792-4509906:1:exon
so has part: feature:4511490-4511575:1:exon
so has part: feature:4527416-4527554:1:exon
so has part: feature:4530215-4530604:1:exon
so has part: feature:4536302-4536589:1:exon
so has part: feature:4538289-4538601:1:exon
so has part: feature:4538707-4539147:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:4463220-4463442:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4485616-4485737:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4509792-4509906:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4511490-4511575:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4527416-4527554:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:4530215-4530604:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:4536302-4536589:1:exon

position:4536589:1
position: 4536589
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:4538289-4538601:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:4538707-4539147:1:exon

LOC115914707
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 87175
gene: LOC115914707
product: uncharacterized LOC115914707, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 ESTs, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_030967381.1
SIO_010081: LOC115914707
subclass of: SO_0000673
so part of: LOC115914707
location: join(4463220..4463442,4485616..4485737,4509792..4509896,4511486..4511575,4527416..4527554,4530215..4530604,4536302..4536735,4538289..4538601,4538707..4539147)
location: region:4463220-4539147:1
so has part: feature:4463220-4463442:1:exon
so has part: feature:4485616-4485737:1:exon
so has part: feature:4509792-4509896:1:exon
so has part: feature:4511486-4511575:1:exon
so has part: feature:4527416-4527554:1:exon
so has part: feature:4530215-4530604:1:exon
so has part: feature:4536302-4536735:1:exon
so has part: feature:4538289-4538601:1:exon
so has part: feature:4538707-4539147:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:4463220-4463442:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4485616-4485737:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4509792-4509896:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4511486-4511575:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4527416-4527554:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:4530215-4530604:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:4536302-4536735:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:4538289-4538601:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:4538707-4539147:1:exon

LOC115914707
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 87175
gene: LOC115914707
product: uncharacterized LOC115914707, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_030967380.1
SIO_010081: LOC115914707
subclass of: SO_0000673
so part of: LOC115914707
location: join(4463220..4463442,4485616..4485737,4509792..4509906,4511490..4511575,4527416..4527554,4530215..4530960)
location: region:4463220-4530960:1
so has part: feature:4463220-4463442:1:exon
so has part: feature:4485616-4485737:1:exon
so has part: feature:4509792-4509906:1:exon
so has part: feature:4511490-4511575:1:exon
so has part: feature:4527416-4527554:1:exon
so has part: feature:4530215-4530960:1:exon

position:4530960:1
position: 4530960
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4463220-4463442:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4485616-4485737:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4509792-4509906:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4511490-4511575:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4527416-4527554:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:4530215-4530960:1:exon

LOC115914707
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 87175
gene: LOC115914707
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: uncharacterized protein LOC115914707 isoform X1
translation: MRPPPNLSQHQPGSRARHGGSVAAAGLVQGGTIKPIPGRKNHKVELNTVVNYKQYVLRMMVFRQIPHLILINWMQDFDQHEKNRHCGSRQHPRPVQELSRTRTSRGKIFPVLCCSWWLRYAEFEQGPVVVQLVGNFCAETRRMLQLELIPEKIASPATTVSLDKKKGGRGGAKRGFLLQKKKCFFPGTCMLKWIEMQCELKKYLETEVIVTFLGLGVHGAFLSNT
SIO_010081: LOC115914707
subclass of: SO_0000673
so part of: LOC115914707
location: join(4463314..4463442,4485616..4485737,4509792..4509906,4511490..4511575,4527416..4527554,4530215..4530301)
location: region:4463314-4530301:1
so has part: feature:4463314-4463442:1:exon
so has part: feature:4485616-4485737:1:exon
so has part: feature:4509792-4509906:1:exon
so has part: feature:4511490-4511575:1:exon
so has part: feature:4527416-4527554:1:exon
so has part: feature:4530215-4530301:1:exon

XP_030823237.1
type: Protein
SIO_000068: ncbiprotein

position:4463314:1
position: 4463314
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4530301:1
position: 4530301
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4463314-4463442:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4485616-4485737:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4509792-4509906:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4511490-4511575:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4527416-4527554:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:4530215-4530301:1:exon

LOC115914707
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 87175
gene: LOC115914707
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: uncharacterized protein LOC115914707 isoform X1
translation: MRPPPNLSQHQPGSRARHGGSVAAAGLVQGGTIKPIPGRKNHKVELNTVVNYKQYVLRMMVFRQIPHLILINWMQDFDQHEKNRHCGSRQHPRPVQELSRTRTSRGKIFPVLCCSWWLRYAEFEQGPVVVQLVGNFCAETRRMLQLELIPEKIASPATTVSLDKKKGGRGGAKRGFLLQKKKCFFPGTCMLKWIEMQCELKKYLETEVIVTFLGLGVHGAFLSNT
SIO_010081: LOC115914707
subclass of: SO_0000673
so part of: LOC115914707
location: join(4463314..4463442,4485616..4485737,4509792..4509906,4511490..4511575,4527416..4527554,4530215..4530301)
location: region:4463314-4530301:1
so has part: feature:4463314-4463442:1:exon
so has part: feature:4485616-4485737:1:exon
so has part: feature:4509792-4509906:1:exon
so has part: feature:4511490-4511575:1:exon
so has part: feature:4527416-4527554:1:exon
so has part: feature:4530215-4530301:1:exon

XP_030823239.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:4463314-4463442:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4485616-4485737:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4509792-4509906:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4511490-4511575:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4527416-4527554:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:4530215-4530301:1:exon

LOC115914707
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 87175
gene: LOC115914707
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: uncharacterized protein LOC115914707 isoform X1
translation: MRPPPNLSQHQPGSRARHGGSVAAAGLVQGGTIKPIPGRKNHKVELNTVVNYKQYVLRMMVFRQIPHLILINWMQDFDQHEKNRHCGSRQHPRPVQELSRTRTSRGKIFPVLCCSWWLRYAEFEQGPVVVQLVGNFCAETRRMLQLELIPEKIASPATTVSLDKKKGGRGGAKRGFLLQKKKCFFPGTCMLKWIEMQCELKKYLETEVIVTFLGLGVHGAFLSNT
SIO_010081: LOC115914707
subclass of: SO_0000673
so part of: LOC115914707
location: join(4463314..4463442,4485616..4485737,4509792..4509906,4511490..4511575,4527416..4527554,4530215..4530301)
location: region:4463314-4530301:1
so has part: feature:4463314-4463442:1:exon
so has part: feature:4485616-4485737:1:exon
so has part: feature:4509792-4509906:1:exon
so has part: feature:4511490-4511575:1:exon
so has part: feature:4527416-4527554:1:exon
so has part: feature:4530215-4530301:1:exon

XP_030823240.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:4463314-4463442:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4485616-4485737:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4509792-4509906:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4511490-4511575:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4527416-4527554:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:4530215-4530301:1:exon

LOC115914707
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 87175
gene: LOC115914707
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: uncharacterized protein LOC115914707 isoform X2
translation: MRPPPNLSQHQPGSRARHGGSVAAAGLVQGGTIKPIPGRKNHKVELNTVVNYKQYVLRMMVFRQIPHLILINWMQDFDQHEKNRHCGSRQHPRPVQELSRTRTSRGKIFPVLCCSWWLRQFEQGPVVVQLVGNFCAETRRMLQLELIPEKIASPATTVSLDKKKGGRGGAKRGFLLQKKKCFFPGTCMLKWIEMQCELKKYLETEVIVTFLGLGVHGAFLSNT
SIO_010081: LOC115914707
subclass of: SO_0000673
so part of: LOC115914707
location: join(4463314..4463442,4485616..4485737,4509792..4509896,4511486..4511575,4527416..4527554,4530215..4530301)
location: region:4463314-4530301:1
so has part: feature:4463314-4463442:1:exon
so has part: feature:4485616-4485737:1:exon
so has part: feature:4509792-4509896:1:exon
so has part: feature:4511486-4511575:1:exon
so has part: feature:4527416-4527554:1:exon
so has part: feature:4530215-4530301:1:exon

XP_030823241.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:4463314-4463442:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4485616-4485737:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4509792-4509896:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4511486-4511575:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4527416-4527554:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:4530215-4530301:1:exon

LOC115914973
type: Gene
subclass of: SO_0000704
RO_0002162: 87175
gene: LOC115914973
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(4685801..4700411)
location: region:4685801-4700411:-1
so has part: feature:4685801-4700411:-1:exon
subclass of: SO_0000010

115914973
type: Gene
SIO_000068: ncbigene

position:4685801:-1
position: 4685801
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4700411:-1
position: 4700411
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4685801-4700411:-1:exon

LOC115914973
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 87175
gene: LOC115914973
product: transmembrane protein 182-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 58% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_030967881.1
SIO_010081: LOC115914973
subclass of: SO_0000673
so part of: LOC115914973
location: complement(join(4685801..4686030,4692794..4692931,4695588..4695686,4697616..4697743,4700269..4700411))
location: region:4685801-4700411:-1
so has part: feature:4700269-4700411:-1:exon
so has part: feature:4697616-4697743:-1:exon
so has part: feature:4695588-4695686:-1:exon
so has part: feature:4692794-4692931:-1:exon
so has part: feature:4685801-4686030:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:4700269-4700411:-1:exon

position:4700269:-1
position: 4700269
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:4697616-4697743:-1:exon

position:4697616:-1
position: 4697616
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4697743:-1
position: 4697743
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:4695588-4695686:-1:exon

position:4695588:-1
position: 4695588
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4695686:-1
position: 4695686
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:4692794-4692931:-1:exon

position:4692794:-1
position: 4692794
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4692931:-1
position: 4692931
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:4685801-4686030:-1:exon

position:4686030:-1
position: 4686030
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC115914973
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 87175
gene: LOC115914973
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: transmembrane protein 182-like
translation: MKAGAAALAAGILGGTGVLLFLIAFGTDYWLLATDTCGVLEHGNSTLSPPQAEAPTEVGNEILTFHHEGFFWRCWFFGEGHPESIWTFWYTSQAHPKFCMHGYLFPMPIAVGPFPHPSYDTTAVYRGFWTAFILLAVAAGLVGGLLLVCGVPFSSPHSYKVGGGFLLLSGGLFLLLVFLFVMWKEFAADFQRYILLERSERCLDDVPVHVYYGWSFMFAAAGVPLVLLSGLLFFLVGRDIMDSLQ
SIO_010081: LOC115914973
subclass of: SO_0000673
so part of: LOC115914973
location: complement(join(4685801..4686030,4692794..4692931,4695588..4695686,4697616..4697743,4700269..4700411))
location: region:4685801-4700411:-1
so has part: feature:4700269-4700411:-1:exon
so has part: feature:4697616-4697743:-1:exon
so has part: feature:4695588-4695686:-1:exon
so has part: feature:4692794-4692931:-1:exon
so has part: feature:4685801-4686030:-1:exon

XP_030823741.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:4700269-4700411:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4697616-4697743:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4695588-4695686:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4692794-4692931:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4685801-4686030:-1:exon

LOC115914978
type: Gene
subclass of: SO_0000704
RO_0002162: 87175
gene: LOC115914978
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(4708085..4732826)
location: region:4708085-4732826:-1
so has part: feature:4708085-4732826:-1:exon
subclass of: SO_0000010

115914978
type: Gene
SIO_000068: ncbigene

position:4708085:-1
position: 4708085
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4732826:-1
position: 4732826
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4708085-4732826:-1:exon

LOC115914978
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 87175
gene: LOC115914978
product: sodium/hydrogen exchanger 2-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 28 Proteins, and 14% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_030967885.1
SIO_010081: LOC115914978
subclass of: SO_0000673
so part of: LOC115914978
location: complement(join(4708085..4708230,4709119..4709185,4714011..4714145,4715324..4715438,4715858..4716022,4717071..4717141,4719276..4719365,4722576..4722772,4726322..4726539,4729724..4729974,4730708..4731171,4732586..4732826))
location: region:4708085-4732826:-1
so has part: feature:4732586-4732826:-1:exon
so has part: feature:4730708-4731171:-1:exon
so has part: feature:4729724-4729974:-1:exon
so has part: feature:4726322-4726539:-1:exon
so has part: feature:4722576-4722772:-1:exon
so has part: feature:4719276-4719365:-1:exon
so has part: feature:4717071-4717141:-1:exon
so has part: feature:4715858-4716022:-1:exon
so has part: feature:4715324-4715438:-1:exon
so has part: feature:4714011-4714145:-1:exon
so has part: feature:4709119-4709185:-1:exon
so has part: feature:4708085-4708230:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:4732586-4732826:-1:exon

position:4732586:-1
position: 4732586
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:4730708-4731171:-1:exon

position:4730708:-1
position: 4730708
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4731171:-1
position: 4731171
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:4729724-4729974:-1:exon

position:4729724:-1
position: 4729724
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4729974:-1
position: 4729974
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:4726322-4726539:-1:exon

position:4726322:-1
position: 4726322
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4726539:-1
position: 4726539
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:4722576-4722772:-1:exon

position:4722576:-1
position: 4722576
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4722772:-1
position: 4722772
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:4719276-4719365:-1:exon

position:4719276:-1
position: 4719276
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4719365:-1
position: 4719365
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:4717071-4717141:-1:exon

position:4717071:-1
position: 4717071
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4717141:-1
position: 4717141
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:4715858-4716022:-1:exon

position:4715858:-1
position: 4715858
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4716022:-1
position: 4716022
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:4715324-4715438:-1:exon

position:4715324:-1
position: 4715324
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4715438:-1
position: 4715438
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:4714011-4714145:-1:exon

position:4714011:-1
position: 4714011
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4714145:-1
position: 4714145
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:4709119-4709185:-1:exon

position:4709119:-1
position: 4709119
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4709185:-1
position: 4709185
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:4708085-4708230:-1:exon

position:4708230:-1
position: 4708230
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC115914978
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 87175
gene: LOC115914978
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: sodium/hydrogen exchanger 2-like
translation: MESQGCRAAAVLAGSWLSCMLQAPRVGALEDAGLENISWAAEDAPGNDSSEHAFFSLDYQHVQVPFEITLWIMLASLAKIGFHLYNKLPSVVPESCLLIFVGLIMGGIIYGLNDRSPPVMDSDIFFLYLLPPIVLDAGYFMPSRPFFENIGTILLYAVVGTIWNVFGIGFSLYGICQVKSFQLQDVSLLHNLLFGSLIAAVDPVAVLAVFEEIHVNEKLHILVFGESLLNDAVTVVLYKLFRSFCEMPTIKSVDVFAGIGKFFVVGLGGVLVGLSFGFTAAFTTRFTKDIRVIEPLFVFLYSYLSYLTAEMFHLSGIVAIISCAMGMKRYVEANISLKSHTTVKYFMKMWSSVSDTLIFIFLGVSTIGENHEWNWPYICFTVIFCLVWRALGVLVLTFFVNRFHVNTITSKDQFIIAYGGLRGAICFSLVFLLPDFHRKKLFIAATTVVILFTVFVQGMTIRPLVDLLAVKRKRESAPTVGEQIHIRFLDHLLAGIEDISGHWGQYYWKDKLEYFNSKYLQKILLREYDQPKSSIVLLYEKLERKHAMELAQAGQLAHGLAHPSFLSSNRTVITDQKLEDTPNPDVLDNMQEILARNLYRIRRTGPAYNRHTLPGDSEPTERAKEILILRHKSLLVELGGSDTCSSRKEKEDSCSAQGEPSPQPKLCRSLTVGNTEKVREVKESRSKSVCAIPPPQPGGTGVKELTLEMYQHRGCSGSP
SIO_010081: LOC115914978
subclass of: SO_0000673
so part of: LOC115914978
location: complement(join(4708085..4708230,4709119..4709185,4714011..4714145,4715324..4715438,4715858..4716022,4717071..4717141,4719276..4719365,4722576..4722772,4726322..4726539,4729724..4729974,4730708..4731171,4732586..4732826))
location: region:4708085-4732826:-1
so has part: feature:4732586-4732826:-1:exon
so has part: feature:4730708-4731171:-1:exon
so has part: feature:4729724-4729974:-1:exon
so has part: feature:4726322-4726539:-1:exon
so has part: feature:4722576-4722772:-1:exon
so has part: feature:4719276-4719365:-1:exon
so has part: feature:4717071-4717141:-1:exon
so has part: feature:4715858-4716022:-1:exon
so has part: feature:4715324-4715438:-1:exon
so has part: feature:4714011-4714145:-1:exon
so has part: feature:4709119-4709185:-1:exon
so has part: feature:4708085-4708230:-1:exon

XP_030823745.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:4732586-4732826:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4730708-4731171:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4729724-4729974:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4726322-4726539:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4722576-4722772:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:4719276-4719365:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:4717071-4717141:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:4715858-4716022:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:4715324-4715438:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:4714011-4714145:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:4709119-4709185:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:4708085-4708230:-1:exon

LOC115914921
type: Gene
subclass of: SO_0000704
RO_0002162: 87175
gene: LOC115914921
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(4740034..4743107)
location: region:4740034-4743107:-1
so has part: feature:4740034-4743107:-1:exon
subclass of: SO_0000010

115914921
type: Gene
SIO_000068: ncbigene

position:4740034:-1
position: 4740034
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4743107:-1
position: 4743107
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4740034-4743107:-1:exon

LOC115914921
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 87175
gene: LOC115914921
product: uncharacterized protein CXorf21-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_030967786.1
SIO_010081: LOC115914921
subclass of: SO_0000673
so part of: LOC115914921
location: complement(join(4740034..4741410,4741600..4741725,4742914..4743107))
location: region:4740034-4743107:-1
so has part: feature:4742914-4743107:-1:exon
so has part: feature:4741600-4741725:-1:exon
so has part: feature:4740034-4741410:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:4742914-4743107:-1:exon

position:4742914:-1
position: 4742914
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:4741600-4741725:-1:exon

position:4741600:-1
position: 4741600
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4741725:-1
position: 4741725
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:4740034-4741410:-1:exon

position:4741410:-1
position: 4741410
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC115914921
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 87175
gene: LOC115914921
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: uncharacterized protein CXorf21-like
translation: MLAEGILTRLIYRESCHQDKPCKSPASQKAKEGIWRQKLVDIPKIKGFADGCEKREELSARSSKVEAGSSPRWGSIEKEPAKDQEVLVKGTATPAVHIPKRGGSLEEVDLYRSWPYNSIYQNYPDLQIGGDRVGGPTCDSGCVLDHVCDELTDGPVLLSIDIPLGQSPLCEHPKKPTGMSLPGDEAGERSLLLSEEPLSNSTLNKYMEAKVAELYKQFFEESLARCGSITNLLTCSWIRNSLDQISVQISQEQNIETSKARGALLHSLALFSSRNAPNRNSSEFSTPNLQISNTGAAKRSCRMEFTS
SIO_010081: LOC115914921
subclass of: SO_0000673
so part of: LOC115914921
location: complement(4740442..4741365)
location: region:4740442-4741365:-1
so has part: feature:4740442-4741365:-1:exon

XP_030823646.1
type: Protein
SIO_000068: ncbiprotein

position:4740442:-1
position: 4740442
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4741365:-1
position: 4741365
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4740442-4741365:-1:exon

SH3BGRL
type: Gene
subclass of: SO_0000704
RO_0002162: 87175
gene: SH3BGRL
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(4746999..4777121)
location: region:4746999-4777121:-1
so has part: feature:4746999-4777121:-1:exon
subclass of: SO_0000010

115914832
type: Gene
SIO_000068: ncbigene

position:4746999:-1
position: 4746999
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4777121:-1
position: 4777121
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4746999-4777121:-1:exon

SH3BGRL
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 87175
gene: SH3BGRL
product: SH3 domain binding glutamate rich protein like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 12 ESTs, 9 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
transcript id: XM_030967619.1
SIO_010081: SH3BGRL
subclass of: SO_0000673
so part of: SH3BGRL
location: complement(join(4746999..4749090,4752094..4752174,4755017..4755202,4776934..4777121))
location: region:4746999-4777121:-1
so has part: feature:4776934-4777121:-1:exon
so has part: feature:4755017-4755202:-1:exon
so has part: feature:4752094-4752174:-1:exon
so has part: feature:4746999-4749090:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:4776934-4777121:-1:exon

position:4776934:-1
position: 4776934
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:4755017-4755202:-1:exon

position:4755017:-1
position: 4755017
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4755202:-1
position: 4755202
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:4752094-4752174:-1:exon

position:4752094:-1
position: 4752094
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4752174:-1
position: 4752174
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:4746999-4749090:-1:exon

position:4749090:-1
position: 4749090
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

SH3BGRL
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 87175
gene: SH3BGRL
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: SH3 domain-binding glutamic acid-rich-like protein
translation: MVIKVYIASSSGSTAIKKQQQDVLGFLEANKIEFEEKDIAANEENRKWMRENVPEDSRPASGNPLPPRLFNDSRYLGDYDAFFEARENNAVYAFLGLTAPPGSKEAEALAKQQA
SIO_010081: SH3BGRL
subclass of: SO_0000673
so part of: SH3BGRL
location: complement(join(4749058..4749090,4752094..4752174,4755017..4755202,4776934..4776978))
location: region:4749058-4776978:-1
so has part: feature:4776934-4776978:-1:exon
so has part: feature:4755017-4755202:-1:exon
so has part: feature:4752094-4752174:-1:exon
so has part: feature:4749058-4749090:-1:exon

XP_030823479.1
type: Protein
SIO_000068: ncbiprotein

position:4749058:-1
position: 4749058
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4776978:-1
position: 4776978
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4776934-4776978:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4755017-4755202:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4752094-4752174:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4749058-4749090:-1:exon

HMGN5
type: Gene
subclass of: SO_0000704
RO_0002162: 87175
gene: HMGN5
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 4785504..4793345
location: region:4785504-4793345:1
so has part: feature:4785504-4793345:1:exon
subclass of: SO_0000010

115914685
type: Gene
SIO_000068: ncbigene

position:4785504:1
position: 4785504
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4793345:1
position: 4793345
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4785504-4793345:1:exon

HMGN5
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 87175
gene: HMGN5
product: high mobility group nucleosome binding domain 5, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 mRNAs, 37 ESTs, 3 Proteins, and 96% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
transcript id: XM_030967316.1
SIO_010081: HMGN5
subclass of: SO_0000673
so part of: HMGN5
location: join(4785504..4785806,4786936..4786965,4787633..4787662,4788114..4788164,4791315..4791458,4792644..4793345)
location: region:4785504-4793345:1
so has part: feature:4785504-4785806:1:exon
so has part: feature:4786936-4786965:1:exon
so has part: feature:4787633-4787662:1:exon
so has part: feature:4788114-4788164:1:exon
so has part: feature:4791315-4791458:1:exon
so has part: feature:4792644-4793345:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:4785504-4785806:1:exon

position:4785806:1
position: 4785806
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:4786936-4786965:1:exon

position:4786936:1
position: 4786936
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4786965:1
position: 4786965
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:4787633-4787662:1:exon

position:4787633:1
position: 4787633
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4787662:1
position: 4787662
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:4788114-4788164:1:exon

position:4788114:1
position: 4788114
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4788164:1
position: 4788164
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:4791315-4791458:1:exon

position:4791315:1
position: 4791315
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4791458:1
position: 4791458
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:4792644-4793345:1:exon

position:4792644:1
position: 4792644
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

HMGN5
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 87175
gene: HMGN5
product: high mobility group nucleosome binding domain 5, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 33 ESTs, 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
transcript id: XM_030967319.1
SIO_010081: HMGN5
subclass of: SO_0000673
so part of: HMGN5
location: join(4785508..4785548,4785763..4785806,4786936..4786965,4787633..4787662,4788114..4788164,4791315..4791458,4792644..4793345)
location: region:4785508-4793345:1
so has part: feature:4785508-4785548:1:exon
so has part: feature:4785763-4785806:1:exon
so has part: feature:4786936-4786965:1:exon
so has part: feature:4787633-4787662:1:exon
so has part: feature:4788114-4788164:1:exon
so has part: feature:4791315-4791458:1:exon
so has part: feature:4792644-4793345:1:exon

position:4785508:1
position: 4785508
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4785508-4785548:1:exon

position:4785548:1
position: 4785548
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:4785763-4785806:1:exon

position:4785763:1
position: 4785763
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:4786936-4786965:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4787633-4787662:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4788114-4788164:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:4791315-4791458:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:4792644-4793345:1:exon

HMGN5
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 87175
gene: HMGN5
product: high mobility group nucleosome binding domain 5, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 33 ESTs, 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
transcript id: XM_030967317.1
SIO_010081: HMGN5
subclass of: SO_0000673
so part of: HMGN5
location: join(4785530..4785548,4785704..4785806,4786936..4786965,4787633..4787662,4788114..4788164,4791315..4791458,4792644..4793345)
location: region:4785530-4793345:1
so has part: feature:4785530-4785548:1:exon
so has part: feature:4785704-4785806:1:exon
so has part: feature:4786936-4786965:1:exon
so has part: feature:4787633-4787662:1:exon
so has part: feature:4788114-4788164:1:exon
so has part: feature:4791315-4791458:1:exon
so has part: feature:4792644-4793345:1:exon

position:4785530:1
position: 4785530
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4785530-4785548:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4785704-4785806:1:exon

position:4785704:1
position: 4785704
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:4786936-4786965:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4787633-4787662:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4788114-4788164:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:4791315-4791458:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:4792644-4793345:1:exon

HMGN5
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 87175
gene: HMGN5
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: high mobility group nucleosome-binding domain-containing protein 5
translation: MPKRKAPAEGEAKEEPKRRSARLSAKPAPPKPEPKPKKAAPKKEKAANDKKEDKKAATKGKKGAKGKEETKQEDAKEENHSENGDTKTNEAPAAEASDDKEAKSE
SIO_010081: HMGN5
subclass of: SO_0000673
so part of: HMGN5
location: join(4785792..4785806,4786936..4786965,4787633..4787662,4788114..4788164,4791315..4791458,4792644..4792691)
location: region:4785792-4792691:1
so has part: feature:4785792-4785806:1:exon
so has part: feature:4786936-4786965:1:exon
so has part: feature:4787633-4787662:1:exon
so has part: feature:4788114-4788164:1:exon
so has part: feature:4791315-4791458:1:exon
so has part: feature:4792644-4792691:1:exon

XP_030823176.1
type: Protein
SIO_000068: ncbiprotein

position:4785792:1
position: 4785792
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4792691:1
position: 4792691
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4785792-4785806:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4786936-4786965:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4787633-4787662:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4788114-4788164:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4791315-4791458:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:4792644-4792691:1:exon

HMGN5
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 87175
gene: HMGN5
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: high mobility group nucleosome-binding domain-containing protein 5
translation: MPKRKAPAEGEAKEEPKRRSARLSAKPAPPKPEPKPKKAAPKKEKAANDKKEDKKAATKGKKGAKGKEETKQEDAKEENHSENGDTKTNEAPAAEASDDKEAKSE
SIO_010081: HMGN5
subclass of: SO_0000673
so part of: HMGN5
location: join(4785792..4785806,4786936..4786965,4787633..4787662,4788114..4788164,4791315..4791458,4792644..4792691)
location: region:4785792-4792691:1
so has part: feature:4785792-4785806:1:exon
so has part: feature:4786936-4786965:1:exon
so has part: feature:4787633-4787662:1:exon
so has part: feature:4788114-4788164:1:exon
so has part: feature:4791315-4791458:1:exon
so has part: feature:4792644-4792691:1:exon

XP_030823177.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:4785792-4785806:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4786936-4786965:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4787633-4787662:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4788114-4788164:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4791315-4791458:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:4792644-4792691:1:exon

HMGN5
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 87175
gene: HMGN5
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: high mobility group nucleosome-binding domain-containing protein 5
translation: MPKRKAPAEGEAKEEPKRRSARLSAKPAPPKPEPKPKKAAPKKEKAANDKKEDKKAATKGKKGAKGKEETKQEDAKEENHSENGDTKTNEAPAAEASDDKEAKSE
SIO_010081: HMGN5
subclass of: SO_0000673
so part of: HMGN5
location: join(4785792..4785806,4786936..4786965,4787633..4787662,4788114..4788164,4791315..4791458,4792644..4792691)
location: region:4785792-4792691:1
so has part: feature:4785792-4785806:1:exon
so has part: feature:4786936-4786965:1:exon
so has part: feature:4787633-4787662:1:exon
so has part: feature:4788114-4788164:1:exon
so has part: feature:4791315-4791458:1:exon
so has part: feature:4792644-4792691:1:exon

XP_030823179.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:4785792-4785806:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4786936-4786965:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4787633-4787662:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4788114-4788164:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4791315-4791458:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:4792644-4792691:1:exon

LOC115914686
type: Gene
subclass of: SO_0000704
RO_0002162: 87175
gene: LOC115914686
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(4791882..4813162)
location: region:4791882-4813162:-1
so has part: feature:4791882-4813162:-1:exon
subclass of: SO_0000011

115914686
type: Gene
SIO_000068: ncbigene

position:4791882:-1
position: 4791882
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4813162:-1
position: 4813162
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4791882-4813162:-1:exon

LOC115914686
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 87175
nc RNA class: lncRNA
gene: LOC115914686
product: uncharacterized LOC115914686
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XR_004061442.1
SIO_010081: LOC115914686
subclass of: SO_0000673
so part of: LOC115914686
location: complement(join(4791882..4792148,4801600..4801702,4806927..4807054,4807332..4807542,4812791..4813162))
location: region:4791882-4813162:-1
so has part: feature:4812791-4813162:-1:exon
so has part: feature:4807332-4807542:-1:exon
so has part: feature:4806927-4807054:-1:exon
so has part: feature:4801600-4801702:-1:exon
so has part: feature:4791882-4792148:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:4812791-4813162:-1:exon

position:4812791:-1
position: 4812791
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:4807332-4807542:-1:exon

position:4807332:-1
position: 4807332
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4807542:-1
position: 4807542
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:4806927-4807054:-1:exon

position:4806927:-1
position: 4806927
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4807054:-1
position: 4807054
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:4801600-4801702:-1:exon

position:4801600:-1
position: 4801600
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4801702:-1
position: 4801702
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:4791882-4792148:-1:exon

position:4792148:-1
position: 4792148
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

BRWD3
type: Gene
subclass of: SO_0000704
RO_0002162: 87175
gene: BRWD3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 4812481..4862832
location: region:4812481-4862832:1
so has part: feature:4812481-4862832:1:exon
subclass of: SO_0000010

115914684
type: Gene
SIO_000068: ncbigene

position:4812481:1
position: 4812481
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4862832:1
position: 4862832
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4812481-4862832:1:exon

BRWD3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 87175
gene: BRWD3
product: bromodomain and WD repeat domain containing 3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 28 ESTs, 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XM_030967315.1
SIO_010081: BRWD3
subclass of: SO_0000673
so part of: BRWD3
location: join(4812481..4812694,4812780..4812838,4812987..4813016,4813270..4813329,4820982..4821132,4823196..4823294,4829240..4829400,4830379..4830600,4831994..4832094,4832727..4832797,4833645..4833745,4834869..4834909,4836317..4836421,4837399..4837552,4837983..4838117,4838516..4838644,4839045..4839270,4839911..4840081,4841607..4841790,4842232..4842325,4842933..4843082,4844549..4844625,4845258..4845435,4846185..4846301,4847486..4847593,4848643..4848767,4848971..4849053,4849483..4849594,4849992..4850053,4850139..4850294,4850963..4851083,4851568..4851693,4851777..4851858,4852411..4852467,4852805..4852945,4853164..4853316,4854164..4854327,4854817..4854914,4855356..4855514,4856710..4862832)
location: region:4812481-4862832:1
so has part: feature:4812481-4812694:1:exon
so has part: feature:4812780-4812838:1:exon
so has part: feature:4812987-4813016:1:exon
so has part: feature:4813270-4813329:1:exon
so has part: feature:4820982-4821132:1:exon
so has part: feature:4823196-4823294:1:exon
so has part: feature:4829240-4829400:1:exon
so has part: feature:4830379-4830600:1:exon
so has part: feature:4831994-4832094:1:exon
so has part: feature:4832727-4832797:1:exon
so has part: feature:4833645-4833745:1:exon
so has part: feature:4834869-4834909:1:exon
so has part: feature:4836317-4836421:1:exon
so has part: feature:4837399-4837552:1:exon
so has part: feature:4837983-4838117:1:exon
so has part: feature:4838516-4838644:1:exon
so has part: feature:4839045-4839270:1:exon
so has part: feature:4839911-4840081:1:exon
so has part: feature:4841607-4841790:1:exon
so has part: feature:4842232-4842325:1:exon
so has part: feature:4842933-4843082:1:exon
so has part: feature:4844549-4844625:1:exon
so has part: feature:4845258-4845435:1:exon
so has part: feature:4846185-4846301:1:exon
so has part: feature:4847486-4847593:1:exon
so has part: feature:4848643-4848767:1:exon
so has part: feature:4848971-4849053:1:exon
so has part: feature:4849483-4849594:1:exon
so has part: feature:4849992-4850053:1:exon
so has part: feature:4850139-4850294:1:exon
so has part: feature:4850963-4851083:1:exon
so has part: feature:4851568-4851693:1:exon
so has part: feature:4851777-4851858:1:exon
so has part: feature:4852411-4852467:1:exon
so has part: feature:4852805-4852945:1:exon
so has part: feature:4853164-4853316:1:exon
so has part: feature:4854164-4854327:1:exon
so has part: feature:4854817-4854914:1:exon
so has part: feature:4855356-4855514:1:exon
so has part: feature:4856710-4862832:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:4812481-4812694:1:exon

position:4812694:1
position: 4812694
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:4812780-4812838:1:exon

position:4812780:1
position: 4812780
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4812838:1
position: 4812838
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:4812987-4813016:1:exon

position:4812987:1
position: 4812987
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4813016:1
position: 4813016
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:4813270-4813329:1:exon

position:4813270:1
position: 4813270
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4813329:1
position: 4813329
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:4820982-4821132:1:exon

position:4820982:1
position: 4820982
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4821132:1
position: 4821132
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:4823196-4823294:1:exon

position:4823196:1
position: 4823196
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4823294:1
position: 4823294
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:4829240-4829400:1:exon

position:4829240:1
position: 4829240
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4829400:1
position: 4829400
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:4830379-4830600:1:exon

position:4830379:1
position: 4830379
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4830600:1
position: 4830600
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:4831994-4832094:1:exon

position:4831994:1
position: 4831994
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4832094:1
position: 4832094
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:4832727-4832797:1:exon

position:4832727:1
position: 4832727
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4832797:1
position: 4832797
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:4833645-4833745:1:exon

position:4833645:1
position: 4833645
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4833745:1
position: 4833745
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:4834869-4834909:1:exon

position:4834869:1
position: 4834869
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4834909:1
position: 4834909
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:4836317-4836421:1:exon

position:4836317:1
position: 4836317
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4836421:1
position: 4836421
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:4837399-4837552:1:exon

position:4837399:1
position: 4837399
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4837552:1
position: 4837552
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:4837983-4838117:1:exon

position:4837983:1
position: 4837983
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4838117:1
position: 4838117
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:4838516-4838644:1:exon

position:4838516:1
position: 4838516
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4838644:1
position: 4838644
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:4839045-4839270:1:exon

position:4839045:1
position: 4839045
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4839270:1
position: 4839270
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:4839911-4840081:1:exon

position:4839911:1
position: 4839911
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4840081:1
position: 4840081
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:4841607-4841790:1:exon

position:4841607:1
position: 4841607
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4841790:1
position: 4841790
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:4842232-4842325:1:exon

position:4842232:1
position: 4842232
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4842325:1
position: 4842325
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:4842933-4843082:1:exon

position:4842933:1
position: 4842933
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4843082:1
position: 4843082
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 22
SIO_000628: feature:4844549-4844625:1:exon

position:4844549:1
position: 4844549
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4844625:1
position: 4844625
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 23
SIO_000628: feature:4845258-4845435:1:exon

position:4845258:1
position: 4845258
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4845435:1
position: 4845435
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 24
SIO_000628: feature:4846185-4846301:1:exon

position:4846185:1
position: 4846185
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4846301:1
position: 4846301
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 25
SIO_000628: feature:4847486-4847593:1:exon

position:4847486:1
position: 4847486
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4847593:1
position: 4847593
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 26
SIO_000628: feature:4848643-4848767:1:exon

position:4848643:1
position: 4848643
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4848767:1
position: 4848767
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 27
SIO_000628: feature:4848971-4849053:1:exon

position:4848971:1
position: 4848971
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4849053:1
position: 4849053
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 28
SIO_000628: feature:4849483-4849594:1:exon

position:4849483:1
position: 4849483
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4849594:1
position: 4849594
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 29
SIO_000628: feature:4849992-4850053:1:exon

position:4849992:1
position: 4849992
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4850053:1
position: 4850053
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 30
SIO_000628: feature:4850139-4850294:1:exon

position:4850139:1
position: 4850139
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4850294:1
position: 4850294
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 31
SIO_000628: feature:4850963-4851083:1:exon

position:4850963:1
position: 4850963
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4851083:1
position: 4851083
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 32
SIO_000628: feature:4851568-4851693:1:exon

position:4851568:1
position: 4851568
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4851693:1
position: 4851693
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 33
SIO_000628: feature:4851777-4851858:1:exon

position:4851777:1
position: 4851777
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4851858:1
position: 4851858
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 34
SIO_000628: feature:4852411-4852467:1:exon

position:4852411:1
position: 4852411
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4852467:1
position: 4852467
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 35
SIO_000628: feature:4852805-4852945:1:exon

position:4852805:1
position: 4852805
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4852945:1
position: 4852945
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 36
SIO_000628: feature:4853164-4853316:1:exon

position:4853164:1
position: 4853164
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4853316:1
position: 4853316
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 37
SIO_000628: feature:4854164-4854327:1:exon

position:4854164:1
position: 4854164
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4854327:1
position: 4854327
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 38
SIO_000628: feature:4854817-4854914:1:exon

position:4854817:1
position: 4854817
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4854914:1
position: 4854914
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 39
SIO_000628: feature:4855356-4855514:1:exon

position:4855356:1
position: 4855356
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4855514:1
position: 4855514
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 40
SIO_000628: feature:4856710-4862832:1:exon

position:4856710:1
position: 4856710
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

BRWD3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 87175
gene: BRWD3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: bromodomain and WD repeat-containing protein 3
translation: MAAAAAPTQLEAELYYLIARFLQSGPCKKSAQVLVEELEEHQLIPRRLDWQGKEHRRSFEDLVAVNAHIPPDYLLRICERLGPLLDKEIPQSVLGVQTLLGVGRQSLLRAAKDFRHTLWKGSAFAALHRGRPPELPVNYGKPPNVVHILSARQLTGCGRFSHLFPTSTYQHMKMHKRILGHLSSVYCIAFDRSGRRIFTGSDDCLVKIWATDDGRLLSTLRGHSAEISDMAVNYENTLLAAGSCDKVVRVWCLRTCAPLAVLQGHSASITSIQFSPARKGTTRYLTSTGADGTICFWQWHANTMKFKDRPVKFAERSRPGVQISCSSFSSGGMFIATGSTDHVIRIYYLGSESPEKMAELESHTDKVVAVQFCNNGDSLRFVSGSRDGTARIWHYHQHDWKSLVLDMATKMTGNNVASGEDKVTKLKVTMVAWDRYDATVITAVNNFLLKVWNSSTGQLLHSLSGHDDEVFVLEAHPFDQRIVLSAGHDGNIFVWDIDKGTKIRNYFNMIEGQGHGAVFDCKFSPDGQHFACTDSHGHLLLFGFGCNKYYEKIPDQMFFHTDYRPLIRDANNYVLDEQTQQAPHLMPPPFLVDVDGNPHPTRFQRLVPGRENCKDEQLIPQLGYVANGDGEVVEQVIGQQTNDQDESILDGMIRELQREQDLRLINEGETLPNPPLNRSHSVNGALRSPGLEVASPPNVGLRRSGQIEGVRQMHLNAPRSQMATERDLMAWSRRVVVNELPPGISKVQEECRAAKGEIEISLYTADKKRKPSHTLQRSELQAGGGRSLRRNQRKRQHAYQTRSTIEHSQQGASHNPCARHESDSSSEEDETVGTSDASMDDPVAAWQSESSSSDSSSEYSDWTADAGINLQPPKRQTRQAARKICSSSEDENMKGTKGLEPKRRKLKQPRKKKASGLLSLEGEPSEEWLAPQWILDTIPRRSPFVPQMGDEIIYFRQGHEAYVRAVRKAKIYSINMQKQPWNKMELREQEFVKTVGIKYEVGPPTLCCLKLAFLDPITGKMTGESFSIKYHDMPDVIDFLVLHQFYNEAKERNWQIGDRFRSIIDDAWWFGTVESQQPFQAEYPDSSFQCYSVHWDNNERERMSPWDMEPIPEGTAYPEEVGAGVPVTPEELTALLYKPQEGEWGAHSRDEECERVIRGIEQLLSLDISNPFAVPVDLSAYPMYCTVVAYPTDLTTIRRRLENRFYRRISALMWEVRYIEHNARTFNEPDSPIVKAAKIVTDVLLRFIGDQSCTDILEIYNKVKAEDLSSTDEEEEVAEVDVDSDAPGTSSGKRRVRRRVKRQPMKASADAWKEQCQQLLNLIYEREDSEPFRQPVDLFSYPDYRDIVDTPMDFSTVKETLEAGNYTSPLEFYKDIRLIFCNSKAYTPNKKSRIYSMTLRLSALFENHMKNIISEYKSAMQCQKRKRPRYRKRLRSSSSSPSTSRASSPKGKQKQVKIQPKPNQNTSLPLTRTNSSVSSHVSDTAEEPLGSATGEELEGQPSSSGSNAQSRSGNAIDPGKSRPVRSKSTPVKQDHSPDGPLTNGDGREPRAGVKRKLLSASEEDEHLEEAEEEEEKKRELKEKSGLSSSESGESGSSSSSDSRSGSDSDSESTSRTDQDYIDGDHDYSKVVQSKKPKRKIKRKLTGGKRNWQGRGTGRRGRWGRWGRWSRGGRGGRGGRGCGRGRGGGRGGRRGRGGRGASRGATRAKRARLADDEFENLFGGQFGENVFGGRFSRPPRIKTRNEGRRTVLYNDDSDNDNFVHTEDPLNLGTSRSGRVRKMTEKARVSHLMGWNY
SIO_010081: BRWD3
subclass of: SO_0000673
so part of: BRWD3
location: join(4812658..4812694,4812780..4812838,4812987..4813016,4813270..4813329,4820982..4821132,4823196..4823294,4829240..4829400,4830379..4830600,4831994..4832094,4832727..4832797,4833645..4833745,4834869..4834909,4836317..4836421,4837399..4837552,4837983..4838117,4838516..4838644,4839045..4839270,4839911..4840081,4841607..4841790,4842232..4842325,4842933..4843082,4844549..4844625,4845258..4845435,4846185..4846301,4847486..4847593,4848643..4848767,4848971..4849053,4849483..4849594,4849992..4850053,4850139..4850294,4850963..4851083,4851568..4851693,4851777..4851858,4852411..4852467,4852805..4852945,4853164..4853316,4854164..4854327,4854817..4854914,4855356..4855514,4856710..4857497)
location: region:4812658-4857497:1
so has part: feature:4812658-4812694:1:exon
so has part: feature:4812780-4812838:1:exon
so has part: feature:4812987-4813016:1:exon
so has part: feature:4813270-4813329:1:exon
so has part: feature:4820982-4821132:1:exon
so has part: feature:4823196-4823294:1:exon
so has part: feature:4829240-4829400:1:exon
so has part: feature:4830379-4830600:1:exon
so has part: feature:4831994-4832094:1:exon
so has part: feature:4832727-4832797:1:exon
so has part: feature:4833645-4833745:1:exon
so has part: feature:4834869-4834909:1:exon
so has part: feature:4836317-4836421:1:exon
so has part: feature:4837399-4837552:1:exon
so has part: feature:4837983-4838117:1:exon
so has part: feature:4838516-4838644:1:exon
so has part: feature:4839045-4839270:1:exon
so has part: feature:4839911-4840081:1:exon
so has part: feature:4841607-4841790:1:exon
so has part: feature:4842232-4842325:1:exon
so has part: feature:4842933-4843082:1:exon
so has part: feature:4844549-4844625:1:exon
so has part: feature:4845258-4845435:1:exon
so has part: feature:4846185-4846301:1:exon
so has part: feature:4847486-4847593:1:exon
so has part: feature:4848643-4848767:1:exon
so has part: feature:4848971-4849053:1:exon
so has part: feature:4849483-4849594:1:exon
so has part: feature:4849992-4850053:1:exon
so has part: feature:4850139-4850294:1:exon
so has part: feature:4850963-4851083:1:exon
so has part: feature:4851568-4851693:1:exon
so has part: feature:4851777-4851858:1:exon
so has part: feature:4852411-4852467:1:exon
so has part: feature:4852805-4852945:1:exon
so has part: feature:4853164-4853316:1:exon
so has part: feature:4854164-4854327:1:exon
so has part: feature:4854817-4854914:1:exon
so has part: feature:4855356-4855514:1:exon
so has part: feature:4856710-4857497:1:exon

XP_030823175.1
type: Protein
SIO_000068: ncbiprotein

position:4812658:1
position: 4812658
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4857497:1
position: 4857497
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4812658-4812694:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4812780-4812838:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4812987-4813016:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4813270-4813329:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4820982-4821132:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:4823196-4823294:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:4829240-4829400:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:4830379-4830600:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:4831994-4832094:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:4832727-4832797:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:4833645-4833745:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:4834869-4834909:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:4836317-4836421:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:4837399-4837552:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:4837983-4838117:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:4838516-4838644:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:4839045-4839270:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:4839911-4840081:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:4841607-4841790:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:4842232-4842325:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:4842933-4843082:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:4844549-4844625:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:4845258-4845435:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:4846185-4846301:1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:4847486-4847593:1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:4848643-4848767:1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:4848971-4849053:1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:4849483-4849594:1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:4849992-4850053:1:exon

urn:…
SIO_000300: 30
SIO_000628: feature:4850139-4850294:1:exon

urn:…
SIO_000300: 31
SIO_000628: feature:4850963-4851083:1:exon

urn:…
SIO_000300: 32
SIO_000628: feature:4851568-4851693:1:exon

urn:…
SIO_000300: 33
SIO_000628: feature:4851777-4851858:1:exon

urn:…
SIO_000300: 34
SIO_000628: feature:4852411-4852467:1:exon

urn:…
SIO_000300: 35
SIO_000628: feature:4852805-4852945:1:exon

urn:…
SIO_000300: 36
SIO_000628: feature:4853164-4853316:1:exon

urn:…
SIO_000300: 37
SIO_000628: feature:4854164-4854327:1:exon

urn:…
SIO_000300: 38
SIO_000628: feature:4854817-4854914:1:exon

urn:…
SIO_000300: 39
SIO_000628: feature:4855356-4855514:1:exon

urn:…
SIO_000300: 40
SIO_000628: feature:4856710-4857497:1:exon

LOC115914979
type: Gene
subclass of: SO_0000704
RO_0002162: 87175
gene: LOC115914979
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 4865160..4866041
location: region:4865160-4866041:1
so has part: feature:4865160-4866041:1:exon
subclass of: SO_0000010

115914979
type: Gene
SIO_000068: ncbigene

position:4865160:1
position: 4865160
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4866041:1
position: 4866041
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4865160-4866041:1:exon

LOC115914979
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 87175
gene: LOC115914979
product: syntaxin-1B-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins
transcript id: XM_030967886.1
SIO_010081: LOC115914979
subclass of: SO_0000673
so part of: LOC115914979
location: 4865160..4866041
location: region:4865160-4866041:1
so has part: feature:4865160-4866041:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:4865160-4866041:1:exon

LOC115914979
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 87175
gene: LOC115914979
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: syntaxin-1B-like
translation: MRDRLAELQQRVAAEGDPHDDSLSFDNPAFVRDDASPVGRALREAAELWRALERLEQLSESIDRTQQSVLCCTSEESIAREKSGLGAARAAFARQAAALQPRLGAPPAAPVGGSGRAGPRVRQTQLWLLLRRYGAVLARHYARESRYRHRLKEQIQRQAELAGINLGAQDVDLLAESPQGPRIVGRDLEELKAKHHLGLAQARQRQLMELEAQLLELRGLFVQLEELLAQQHGAADSVEQHVLRTLDYAAQTGGGVKRAAKYQRPSRRSALLRAARGLCSCCPCLPCPGRGLR
SIO_010081: LOC115914979
subclass of: SO_0000673
so part of: LOC115914979
location: 4865160..4866041
location: region:4865160-4866041:1
so has part: feature:4865160-4866041:1:exon

XP_030823746.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:4865160-4866041:1:exon

TENT5D
type: Gene
subclass of: SO_0000704
RO_0002162: 87175
gene: TENT5D
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(4898949..4900124)
location: region:4898949-4900124:-1
so has part: feature:4898949-4900124:-1:exon
subclass of: SO_0000010

115914916
type: Gene
SIO_000068: ncbigene

position:4898949:-1
position: 4898949
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4900124:-1
position: 4900124
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4898949-4900124:-1:exon

TENT5D
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 87175
gene: TENT5D
product: terminal nucleotidyltransferase 5D
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 23 Proteins
transcript id: XM_030967771.1
SIO_010081: TENT5D
subclass of: SO_0000673
so part of: TENT5D
location: complement(4898949..4900124)
location: region:4898949-4900124:-1
so has part: feature:4898949-4900124:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:4898949-4900124:-1:exon

TENT5D
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 87175
gene: TENT5D
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: terminal nucleotidyltransferase 5D
translation: MTEDLDHRFSYLTWDQIKILDQVLTEAIPIHGRGNFPTLEVKPKDIIHMVKEQLIEKQIHVRDIRLNGSTASHILVKHNGTSYKDLDIIFGVELPSELEFQVVKEAVLNCLLDFLPKCVNKQKITAQTMKDAYVQKMVKVSTDHDRWSLISLSNNSGKNVELKFVSSLRRQFEFSVDSFQIILDSILAVYRASDQPLTQDCHPAVIAESMYGDFNQAMDHLKYKLISTRNPEEIRGGGLLKYSNLLVRDFKPADEAEIKSLERYMCSRFFIDFPDVAEQQRKIESYLRNHFIGEEKSKYDYLMTLRGVVNKSTVCLMGHERRQTLNMITILALKVLGEQNIIPNAANVTCYYQPAPYISDRNFSNYYIAHGQPPVFYQPYPFHIQLQSGMV
SIO_010081: TENT5D
subclass of: SO_0000673
so part of: TENT5D
location: complement(4898949..4900124)
location: region:4898949-4900124:-1
so has part: feature:4898949-4900124:-1:exon

XP_030823631.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:4898949-4900124:-1:exon

CHMP1B
type: Gene
subclass of: SO_0000704
RO_0002162: 87175
gene: CHMP1B
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 4927116..4935744
location: region:4927116-4935744:1
so has part: feature:4927116-4935744:1:exon
subclass of: SO_0000010

115914954
type: Gene
SIO_000068: ncbigene

position:4927116:1
position: 4927116
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4935744:1
position: 4935744
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4927116-4935744:1:exon

CHMP1B
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 87175
gene: CHMP1B
product: charged multivesicular body protein 1B
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 18 ESTs, 21 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
transcript id: XM_030967851.1
SIO_010081: CHMP1B
subclass of: SO_0000673
so part of: CHMP1B
location: join(4927116..4927238,4929381..4929478,4930185..4930331,4931083..4931151,4931296..4931403,4931752..4931795,4932099..4932171,4932754..4935744)
location: region:4927116-4935744:1
so has part: feature:4927116-4927238:1:exon
so has part: feature:4929381-4929478:1:exon
so has part: feature:4930185-4930331:1:exon
so has part: feature:4931083-4931151:1:exon
so has part: feature:4931296-4931403:1:exon
so has part: feature:4931752-4931795:1:exon
so has part: feature:4932099-4932171:1:exon
so has part: feature:4932754-4935744:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:4927116-4927238:1:exon

position:4927238:1
position: 4927238
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:4929381-4929478:1:exon

position:4929381:1
position: 4929381
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4929478:1
position: 4929478
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:4930185-4930331:1:exon

position:4930185:1
position: 4930185
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4930331:1
position: 4930331
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:4931083-4931151:1:exon

position:4931083:1
position: 4931083
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4931151:1
position: 4931151
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:4931296-4931403:1:exon

position:4931296:1
position: 4931296
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4931403:1
position: 4931403
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:4931752-4931795:1:exon

position:4931752:1
position: 4931752
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4931795:1
position: 4931795
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:4932099-4932171:1:exon

position:4932099:1
position: 4932099
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4932171:1
position: 4932171
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:4932754-4935744:1:exon

position:4932754:1
position: 4932754
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

CHMP1B
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 87175
gene: CHMP1B
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: charged multivesicular body protein 1b
translation: MSNMEKHLFNLKFAAKELNRNSKKCDKEEKAEKAKIKKAIQKGNMEVARIHAENAIRQKNQAINFLRMSARVDAVAARVQTAVTMGKVTKSMAGVVKSMDATLKSMNLEKISALMDKFEHQFETLDVQTQQMEDTMSNTTTLTTPQNQVDMLLQEMADEAGLDLNMELPQGQTGSVATSVASAEQDELSQRLARLRDQV
SIO_010081: CHMP1B
subclass of: SO_0000673
so part of: CHMP1B
location: join(4927223..4927238,4929381..4929478,4930185..4930331,4931083..4931151,4931296..4931403,4931752..4931795,4932099..4932171,4932754..4932798)
location: region:4927223-4932798:1
so has part: feature:4927223-4927238:1:exon
so has part: feature:4929381-4929478:1:exon
so has part: feature:4930185-4930331:1:exon
so has part: feature:4931083-4931151:1:exon
so has part: feature:4931296-4931403:1:exon
so has part: feature:4931752-4931795:1:exon
so has part: feature:4932099-4932171:1:exon
so has part: feature:4932754-4932798:1:exon

XP_030823711.1
type: Protein
SIO_000068: ncbiprotein

position:4927223:1
position: 4927223
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4932798:1
position: 4932798
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4927223-4927238:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4929381-4929478:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4930185-4930331:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4931083-4931151:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4931296-4931403:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:4931752-4931795:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:4932099-4932171:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:4932754-4932798:1:exon