Camarhynchus parvulus chromosome 29, STF_HiC, whole genome shotgun sequence.
type: Entry
definition: Camarhynchus parvulus chromosome 29, STF_HiC, whole genome shotgun sequence.
sequence version: NC_044599.1
sequence date: 2019-09-26
sequence: sequence
division: CON
label: NC_044599.1
type: RefSeq
SIO_000068: refseq
dblink: PRJNA566393
dblink: SAMEA5603054
keyword: WGS
keyword: RefSeq
source: Camarhynchus parvulus
organism: Camarhynchus parvulus
taxonomy: Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Passeriformes; Thraupidae; Camarhynchus.
comment: REFSEQ INFORMATION: The reference sequence is identical to\nLR595725.1.\nAssembly name: STF_HiC\nThe genomic sequence for this RefSeq record is from the\nwhole-genome assembly released by the UPPSALA UNIVERISTY on\n2019/09/06. The original whole-genome shotgun project has the\naccession CABFNF000000000.1.\n\n##Genome-Annotation-Data-START##\nAnnotation Provider :: NCBI\nAnnotation Status :: Full annotation\nAnnotation Name :: Camarhynchus parvulus Annotation\n Release 100\nAnnotation Version :: 100\nAnnotation Pipeline :: NCBI eukaryotic genome annotation\n pipeline\nAnnotation Software Version :: 8.2\nAnnotation Method :: Best-placed RefSeq; Gnomon\nFeatures Annotated :: Gene; mRNA; CDS; ncRNA\n##Genome-Annotation-Data-END##

sequence
subclass of: SO_0000340
sequence length: 3096680
topology: linear
so has quality: SO_0000987
location: 1..3096680
location: region:1-3096680:1
RO_0002162: 87175

NC_044599
type: RefSeq
SIO_000068: refseq

PRJNA566393
type: BioProject
SIO_000068: bioproject

SAMEA5603054
type: BioSample
SIO_000068: biosample

position:1:1
position: 1
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3096680:1
position: 3096680
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

feature:1-3096680:1:source
so part of: sequence
organism: Camarhynchus parvulus
mol type: genomic DNA
chromosome: 29

87175
type: Taxonomy
SIO_000068: taxonomy

LOC115914634
type: Gene
subclass of: SO_0000704
RO_0002162: 87175
gene: LOC115914634
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(736..8265)
location: region:736-8265:-1
so has part: feature:736-8265:-1:exon
subclass of: SO_0000011

115914634
type: Gene
SIO_000068: ncbigene

position:736:-1
position: 736
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:8265:-1
position: 8265
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:736-8265:-1:exon

LOC115914634
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 87175
nc RNA class: lncRNA
gene: LOC115914634
product: uncharacterized LOC115914634
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
transcript id: XR_004061433.1
SIO_010081: LOC115914634
subclass of: SO_0000673
so part of: LOC115914634
location: complement(join(736..829,1369..1426,2651..2834,7832..8265))
location: region:736-8265:-1
so has part: feature:7832-8265:-1:exon
so has part: feature:2651-2834:-1:exon
so has part: feature:1369-1426:-1:exon
so has part: feature:736-829:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:7832-8265:-1:exon

position:7832:-1
position: 7832
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2651-2834:-1:exon

position:2651:-1
position: 2651
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2834:-1
position: 2834
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1369-1426:-1:exon

position:1369:-1
position: 1369
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1426:-1
position: 1426
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:736-829:-1:exon

position:829:-1
position: 829
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

ASB8
type: Gene
subclass of: SO_0000704
RO_0002162: 87175
gene: ASB8
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 8490..11257
location: region:8490-11257:1
so has part: feature:8490-11257:1:exon
subclass of: SO_0000010

115914575
type: Gene
SIO_000068: ncbigene

position:8490:1
position: 8490
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:11257:1
position: 11257
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:8490-11257:1:exon

ASB8
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 87175
gene: ASB8
product: ankyrin repeat and SOCS box containing 8, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 mRNAs, 3 ESTs, 14 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
transcript id: XM_030967153.1
SIO_010081: ASB8
subclass of: SO_0000673
so part of: ASB8
location: join(8490..8880,9397..9501,10079..11256)
location: region:8490-11256:1
so has part: feature:8490-8880:1:exon
so has part: feature:9397-9501:1:exon
so has part: feature:10079-11256:1:exon

position:11256:1
position: 11256
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:8490-8880:1:exon

position:8880:1
position: 8880
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:9397-9501:1:exon

position:9397:1
position: 9397
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:9501:1
position: 9501
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:10079-11256:1:exon

position:10079:1
position: 10079
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

ASB8
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 87175
gene: ASB8
product: ankyrin repeat and SOCS box containing 8, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 2 ESTs, 2 Proteins, and 87% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_030967154.1
SIO_010081: ASB8
subclass of: SO_0000673
so part of: ASB8
location: join(8742..8875,9348..9501,10079..11257)
location: region:8742-11257:1
so has part: feature:8742-8875:1:exon
so has part: feature:9348-9501:1:exon
so has part: feature:10079-11257:1:exon

position:8742:1
position: 8742
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:8742-8875:1:exon

position:8875:1
position: 8875
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:9348-9501:1:exon

position:9348:1
position: 9348
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:10079-11257:1:exon

ASB8
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 87175
gene: ASB8
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: ankyrin repeat and SOCS box protein 8 isoform X2
translation: MPRRGPRHVVHHAEHSEQVLAVRAPYPHHRRHPLLPSGQRGGSHRDGKGEFLTGGCSCAPQGADVNCLHGTLKPLHCACMVADADCVELLLQKGAEVNALDGYNRTALHYAAEKDETCVEILLEYGANPNALDGNKDTPLHWAAFKNNAECVRALLANGALVNALDYNNDTPLSWAAMKGNLESVSVLLDFGAEVRVVNLKGQSPISRLVALLVRGLGTEREDSCLDLLHRATGHFELRKNGSLPWEVARDPQLCQRLTLLCSAPGTLQALSRYAARRSLGLRFLPQAVQQLPLPACLKEYLLLLT
SIO_010081: ASB8
subclass of: SO_0000673
so part of: ASB8
location: join(8742..8875,9348..9501,10079..10711)
location: region:8742-10711:1
so has part: feature:8742-8875:1:exon
so has part: feature:9348-9501:1:exon
so has part: feature:10079-10711:1:exon

XP_030823014.1
type: Protein
SIO_000068: ncbiprotein

position:10711:1
position: 10711
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:8742-8875:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:9348-9501:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:10079-10711:1:exon

ASB8
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 87175
gene: ASB8
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: ankyrin repeat and SOCS box protein 8 isoform X1
translation: MWYIMQSIQSKYSLSERLIRTIAAIRSFPRDNVEDLIGRGADVNCLHGTLKPLHCACMVADADCVELLLQKGAEVNALDGYNRTALHYAAEKDETCVEILLEYGANPNALDGNKDTPLHWAAFKNNAECVRALLANGALVNALDYNNDTPLSWAAMKGNLESVSVLLDFGAEVRVVNLKGQSPISRLVALLVRGLGTEREDSCLDLLHRATGHFELRKNGSLPWEVARDPQLCQRLTLLCSAPGTLQALSRYAARRSLGLRFLPQAVQQLPLPACLKEYLLLLT
SIO_010081: ASB8
subclass of: SO_0000673
so part of: ASB8
location: join(8764..8880,9397..9501,10079..10711)
location: region:8764-10711:1
so has part: feature:8764-8880:1:exon
so has part: feature:9397-9501:1:exon
so has part: feature:10079-10711:1:exon

XP_030823013.1
type: Protein
SIO_000068: ncbiprotein

position:8764:1
position: 8764
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:8764-8880:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:9397-9501:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:10079-10711:1:exon

PFKM
type: Gene
subclass of: SO_0000704
RO_0002162: 87175
gene: PFKM
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(11503..20595)
location: region:11503-20595:-1
so has part: feature:11503-20595:-1:exon
subclass of: SO_0000010

115914573
type: Gene
SIO_000068: ncbigene

position:11503:-1
position: 11503
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:20595:-1
position: 20595
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:11503-20595:-1:exon

PFKM
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 87175
gene: PFKM
product: phosphofructokinase, muscle, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 30 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_030967145.1
SIO_010081: PFKM
subclass of: SO_0000673
so part of: PFKM
location: complement(join(11503..11966,12057..12162,12553..12652,12777..12888,13083..13144,13246..13410,13794..13946,14174..14261,14350..14420,15001..15147,15279..15342,15425..15489,15773..15898,15994..16086,16176..16271,16405..16513,16601..16645,16723..16888,17543..17732,18186..18263,18356..18429,19191..19289,20419..20595))
location: region:11503-20595:-1
so has part: feature:20419-20595:-1:exon
so has part: feature:19191-19289:-1:exon
so has part: feature:18356-18429:-1:exon
so has part: feature:18186-18263:-1:exon
so has part: feature:17543-17732:-1:exon
so has part: feature:16723-16888:-1:exon
so has part: feature:16601-16645:-1:exon
so has part: feature:16405-16513:-1:exon
so has part: feature:16176-16271:-1:exon
so has part: feature:15994-16086:-1:exon
so has part: feature:15773-15898:-1:exon
so has part: feature:15425-15489:-1:exon
so has part: feature:15279-15342:-1:exon
so has part: feature:15001-15147:-1:exon
so has part: feature:14350-14420:-1:exon
so has part: feature:14174-14261:-1:exon
so has part: feature:13794-13946:-1:exon
so has part: feature:13246-13410:-1:exon
so has part: feature:13083-13144:-1:exon
so has part: feature:12777-12888:-1:exon
so has part: feature:12553-12652:-1:exon
so has part: feature:12057-12162:-1:exon
so has part: feature:11503-11966:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:20419-20595:-1:exon

position:20419:-1
position: 20419
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:19191-19289:-1:exon

position:19191:-1
position: 19191
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:19289:-1
position: 19289
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:18356-18429:-1:exon

position:18356:-1
position: 18356
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:18429:-1
position: 18429
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:18186-18263:-1:exon

position:18186:-1
position: 18186
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:18263:-1
position: 18263
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:17543-17732:-1:exon

position:17543:-1
position: 17543
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:17732:-1
position: 17732
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:16723-16888:-1:exon

position:16723:-1
position: 16723
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:16888:-1
position: 16888
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:16601-16645:-1:exon

position:16601:-1
position: 16601
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:16645:-1
position: 16645
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:16405-16513:-1:exon

position:16405:-1
position: 16405
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:16513:-1
position: 16513
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:16176-16271:-1:exon

position:16176:-1
position: 16176
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:16271:-1
position: 16271
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:15994-16086:-1:exon

position:15994:-1
position: 15994
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:16086:-1
position: 16086
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:15773-15898:-1:exon

position:15773:-1
position: 15773
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:15898:-1
position: 15898
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:15425-15489:-1:exon

position:15425:-1
position: 15425
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:15489:-1
position: 15489
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:15279-15342:-1:exon

position:15279:-1
position: 15279
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:15342:-1
position: 15342
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:15001-15147:-1:exon

position:15001:-1
position: 15001
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:15147:-1
position: 15147
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:14350-14420:-1:exon

position:14350:-1
position: 14350
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:14420:-1
position: 14420
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:14174-14261:-1:exon

position:14174:-1
position: 14174
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:14261:-1
position: 14261
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:13794-13946:-1:exon

position:13794:-1
position: 13794
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:13946:-1
position: 13946
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:13246-13410:-1:exon

position:13246:-1
position: 13246
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:13410:-1
position: 13410
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:13083-13144:-1:exon

position:13083:-1
position: 13083
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:13144:-1
position: 13144
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:12777-12888:-1:exon

position:12777:-1
position: 12777
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:12888:-1
position: 12888
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:12553-12652:-1:exon

position:12553:-1
position: 12553
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:12652:-1
position: 12652
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 22
SIO_000628: feature:12057-12162:-1:exon

position:12057:-1
position: 12057
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:12162:-1
position: 12162
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 23
SIO_000628: feature:11503-11966:-1:exon

position:11966:-1
position: 11966
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

PFKM
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 87175
gene: PFKM
product: phosphofructokinase, muscle, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 29 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_030967148.1
SIO_010081: PFKM
subclass of: SO_0000673
so part of: PFKM
location: complement(join(11503..11966,12057..12162,12553..12652,12777..12888,13083..13144,13246..13410,13794..13946,14174..14261,14350..14420,15001..15147,15279..15342,15425..15489,15773..15898,15994..16086,16176..16271,16405..16513,16601..16645,16723..16888,17543..17732,18186..18263,18356..18429,19191..19289,20184..20265))
location: region:11503-20265:-1
so has part: feature:20184-20265:-1:exon
so has part: feature:19191-19289:-1:exon
so has part: feature:18356-18429:-1:exon
so has part: feature:18186-18263:-1:exon
so has part: feature:17543-17732:-1:exon
so has part: feature:16723-16888:-1:exon
so has part: feature:16601-16645:-1:exon
so has part: feature:16405-16513:-1:exon
so has part: feature:16176-16271:-1:exon
so has part: feature:15994-16086:-1:exon
so has part: feature:15773-15898:-1:exon
so has part: feature:15425-15489:-1:exon
so has part: feature:15279-15342:-1:exon
so has part: feature:15001-15147:-1:exon
so has part: feature:14350-14420:-1:exon
so has part: feature:14174-14261:-1:exon
so has part: feature:13794-13946:-1:exon
so has part: feature:13246-13410:-1:exon
so has part: feature:13083-13144:-1:exon
so has part: feature:12777-12888:-1:exon
so has part: feature:12553-12652:-1:exon
so has part: feature:12057-12162:-1:exon
so has part: feature:11503-11966:-1:exon

position:20265:-1
position: 20265
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:20184-20265:-1:exon

position:20184:-1
position: 20184
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:19191-19289:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:18356-18429:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:18186-18263:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:17543-17732:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:16723-16888:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:16601-16645:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:16405-16513:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:16176-16271:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:15994-16086:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:15773-15898:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:15425-15489:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:15279-15342:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:15001-15147:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:14350-14420:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:14174-14261:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:13794-13946:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:13246-13410:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:13083-13144:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:12777-12888:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:12553-12652:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:12057-12162:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:11503-11966:-1:exon

PFKM
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 87175
gene: PFKM
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: ATP-dependent 6-phosphofructokinase, muscle type isoform X1
translation: MVAVPVAPALSRFVAPAALSVAALLLLLLLSFLPPGPGRRRSAGRKMPPSPAGPQHTETMGAGKAIAVLTSGGDAQGMNAAVRAVVRVGIYTGAKVFFVCEGYQGLVDGGDHIREATWESVSMMLQLGGTVIGSARCQDFRTREGRLRAARNLVKRGITNLCVIGGDGSLTGADTFRAEWGGLLAELLKTGGITAEEAQRSSHLNIVGMVGSIDNDFCGTDMTIGTDSALHRIMEIVDAITTTAQSHQRTFVLEVMGRHCGYLALITALACGADWVFIPESPPEDNWEEHLCRRLAETRDGGSRLNIIIVAEGAIDKHGKAITSDEIKALVVKRLGYDTRVTILGHVQRGGTPSAFDRILASRMGVEAVMALLEGTPETPACVVSLSGNQAVRLPLMECVQVTKDVTTAMNEGRFEDAVKLRGRSFQNNWNVYKLLAHIRPPATKSGYTVAVMNVGAPAAGMNAAVRATVRIGLIHGHHMLAVHDGFEGLAFGMVEEIGWNTVGSWTGLGGSKLGTKRTLPKKHFEEISANISKFGIHGLIIIGGFEAFTGGLELVEGRARFEELCIPLCIVPATVSNNVPGSDFSIGADTALNTITTTCDLIKQSAAGTKRRVFIIETMGGFCGYLATMAGLAAGADAAYIFEEPFSSRDLQANVDHLTEKMKTTVKRGLVLRNERCNENYTTDFIYNLYCEEGKGIFDCRKNVLGHMQQGGSPTPFDRNFGTKMGAKAVAWITGKIKECSRHGRIFANTADSACLLGMRKRSLVFQPIAELRQQTDFEHRIPKEQWWLKLRPILKILAKYNIELDTSETAHLEHLTRKVLVPEATL
SIO_010081: PFKM
subclass of: SO_0000673
so part of: PFKM
location: complement(join(11819..11966,12057..12162,12553..12652,12777..12888,13083..13144,13246..13410,13794..13946,14174..14261,14350..14420,15001..15147,15279..15342,15425..15489,15773..15898,15994..16086,16176..16271,16405..16513,16601..16645,16723..16888,17543..17732,18186..18263,18356..18429,19191..19289,20419..20548))
location: region:11819-20548:-1
so has part: feature:20419-20548:-1:exon
so has part: feature:19191-19289:-1:exon
so has part: feature:18356-18429:-1:exon
so has part: feature:18186-18263:-1:exon
so has part: feature:17543-17732:-1:exon
so has part: feature:16723-16888:-1:exon
so has part: feature:16601-16645:-1:exon
so has part: feature:16405-16513:-1:exon
so has part: feature:16176-16271:-1:exon
so has part: feature:15994-16086:-1:exon
so has part: feature:15773-15898:-1:exon
so has part: feature:15425-15489:-1:exon
so has part: feature:15279-15342:-1:exon
so has part: feature:15001-15147:-1:exon
so has part: feature:14350-14420:-1:exon
so has part: feature:14174-14261:-1:exon
so has part: feature:13794-13946:-1:exon
so has part: feature:13246-13410:-1:exon
so has part: feature:13083-13144:-1:exon
so has part: feature:12777-12888:-1:exon
so has part: feature:12553-12652:-1:exon
so has part: feature:12057-12162:-1:exon
so has part: feature:11819-11966:-1:exon

XP_030823005.1
type: Protein
SIO_000068: ncbiprotein

position:11819:-1
position: 11819
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:20548:-1
position: 20548
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:20419-20548:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:19191-19289:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:18356-18429:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:18186-18263:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:17543-17732:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:16723-16888:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:16601-16645:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:16405-16513:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:16176-16271:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:15994-16086:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:15773-15898:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:15425-15489:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:15279-15342:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:15001-15147:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:14350-14420:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:14174-14261:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:13794-13946:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:13246-13410:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:13083-13144:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:12777-12888:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:12553-12652:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:12057-12162:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:11819-11966:-1:exon

PFKM
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 87175
gene: PFKM
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: ATP-dependent 6-phosphofructokinase, muscle type isoform X2
translation: MDWNRLGRGRKMPPSPAGPQHTETMGAGKAIAVLTSGGDAQGMNAAVRAVVRVGIYTGAKVFFVCEGYQGLVDGGDHIREATWESVSMMLQLGGTVIGSARCQDFRTREGRLRAARNLVKRGITNLCVIGGDGSLTGADTFRAEWGGLLAELLKTGGITAEEAQRSSHLNIVGMVGSIDNDFCGTDMTIGTDSALHRIMEIVDAITTTAQSHQRTFVLEVMGRHCGYLALITALACGADWVFIPESPPEDNWEEHLCRRLAETRDGGSRLNIIIVAEGAIDKHGKAITSDEIKALVVKRLGYDTRVTILGHVQRGGTPSAFDRILASRMGVEAVMALLEGTPETPACVVSLSGNQAVRLPLMECVQVTKDVTTAMNEGRFEDAVKLRGRSFQNNWNVYKLLAHIRPPATKSGYTVAVMNVGAPAAGMNAAVRATVRIGLIHGHHMLAVHDGFEGLAFGMVEEIGWNTVGSWTGLGGSKLGTKRTLPKKHFEEISANISKFGIHGLIIIGGFEAFTGGLELVEGRARFEELCIPLCIVPATVSNNVPGSDFSIGADTALNTITTTCDLIKQSAAGTKRRVFIIETMGGFCGYLATMAGLAAGADAAYIFEEPFSSRDLQANVDHLTEKMKTTVKRGLVLRNERCNENYTTDFIYNLYCEEGKGIFDCRKNVLGHMQQGGSPTPFDRNFGTKMGAKAVAWITGKIKECSRHGRIFANTADSACLLGMRKRSLVFQPIAELRQQTDFEHRIPKEQWWLKLRPILKILAKYNIELDTSETAHLEHLTRKVLVPEATL
SIO_010081: PFKM
subclass of: SO_0000673
so part of: PFKM
location: complement(join(11819..11966,12057..12162,12553..12652,12777..12888,13083..13144,13246..13410,13794..13946,14174..14261,14350..14420,15001..15147,15279..15342,15425..15489,15773..15898,15994..16086,16176..16271,16405..16513,16601..16645,16723..16888,17543..17732,18186..18263,18356..18429,19191..19289,20184..20208))
location: region:11819-20208:-1
so has part: feature:20184-20208:-1:exon
so has part: feature:19191-19289:-1:exon
so has part: feature:18356-18429:-1:exon
so has part: feature:18186-18263:-1:exon
so has part: feature:17543-17732:-1:exon
so has part: feature:16723-16888:-1:exon
so has part: feature:16601-16645:-1:exon
so has part: feature:16405-16513:-1:exon
so has part: feature:16176-16271:-1:exon
so has part: feature:15994-16086:-1:exon
so has part: feature:15773-15898:-1:exon
so has part: feature:15425-15489:-1:exon
so has part: feature:15279-15342:-1:exon
so has part: feature:15001-15147:-1:exon
so has part: feature:14350-14420:-1:exon
so has part: feature:14174-14261:-1:exon
so has part: feature:13794-13946:-1:exon
so has part: feature:13246-13410:-1:exon
so has part: feature:13083-13144:-1:exon
so has part: feature:12777-12888:-1:exon
so has part: feature:12553-12652:-1:exon
so has part: feature:12057-12162:-1:exon
so has part: feature:11819-11966:-1:exon

XP_030823008.1
type: Protein
SIO_000068: ncbiprotein

position:20208:-1
position: 20208
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:20184-20208:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:19191-19289:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:18356-18429:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:18186-18263:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:17543-17732:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:16723-16888:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:16601-16645:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:16405-16513:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:16176-16271:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:15994-16086:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:15773-15898:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:15425-15489:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:15279-15342:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:15001-15147:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:14350-14420:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:14174-14261:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:13794-13946:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:13246-13410:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:13083-13144:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:12777-12888:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:12553-12652:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:12057-12162:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:11819-11966:-1:exon

SENP1
type: Gene
subclass of: SO_0000704
RO_0002162: 87175
gene: SENP1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 20269..31281
location: region:20269-31281:1
so has part: feature:20269-31281:1:exon
subclass of: SO_0000010

115914574
type: Gene
SIO_000068: ncbigene

position:20269:1
position: 20269
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:31281:1
position: 31281
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:20269-31281:1:exon

SENP1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 87175
gene: SENP1
product: SUMO specific peptidase 1, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 ESTs, 10 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_030967149.1
SIO_010081: SENP1
subclass of: SO_0000673
so part of: SENP1
location: join(20269..21705,22361..22433,22529..22640,23061..23235,24197..24300,24586..24821,25153..25207,25363..25401,25507..25591,26084..26236,27063..27194,27663..27866,28580..28659,29047..29131,29427..29522,30091..31281)
location: region:20269-31281:1
so has part: feature:20269-21705:1:exon
so has part: feature:22361-22433:1:exon
so has part: feature:22529-22640:1:exon
so has part: feature:23061-23235:1:exon
so has part: feature:24197-24300:1:exon
so has part: feature:24586-24821:1:exon
so has part: feature:25153-25207:1:exon
so has part: feature:25363-25401:1:exon
so has part: feature:25507-25591:1:exon
so has part: feature:26084-26236:1:exon
so has part: feature:27063-27194:1:exon
so has part: feature:27663-27866:1:exon
so has part: feature:28580-28659:1:exon
so has part: feature:29047-29131:1:exon
so has part: feature:29427-29522:1:exon
so has part: feature:30091-31281:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:20269-21705:1:exon

position:21705:1
position: 21705
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:22361-22433:1:exon

position:22361:1
position: 22361
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:22433:1
position: 22433
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:22529-22640:1:exon

position:22529:1
position: 22529
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:22640:1
position: 22640
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:23061-23235:1:exon

position:23061:1
position: 23061
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:23235:1
position: 23235
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:24197-24300:1:exon

position:24197:1
position: 24197
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:24300:1
position: 24300
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:24586-24821:1:exon

position:24586:1
position: 24586
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:24821:1
position: 24821
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:25153-25207:1:exon

position:25153:1
position: 25153
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:25207:1
position: 25207
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:25363-25401:1:exon

position:25363:1
position: 25363
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:25401:1
position: 25401
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:25507-25591:1:exon

position:25507:1
position: 25507
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:25591:1
position: 25591
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:26084-26236:1:exon

position:26084:1
position: 26084
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:26236:1
position: 26236
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:27063-27194:1:exon

position:27063:1
position: 27063
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:27194:1
position: 27194
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:27663-27866:1:exon

position:27663:1
position: 27663
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:27866:1
position: 27866
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:28580-28659:1:exon

position:28580:1
position: 28580
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:28659:1
position: 28659
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:29047-29131:1:exon

position:29047:1
position: 29047
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:29131:1
position: 29131
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:29427-29522:1:exon

position:29427:1
position: 29427
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:29522:1
position: 29522
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:30091-31281:1:exon

position:30091:1
position: 30091
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

SENP1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 87175
gene: SENP1
product: SUMO specific peptidase 1, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 ESTs, 10 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_030967150.1
SIO_010081: SENP1
subclass of: SO_0000673
so part of: SENP1
location: join(20269..21705,22361..22433,22544..22640,23061..23235,24197..24300,24586..24821,25153..25207,25363..25401,25507..25591,26084..26236,27063..27194,27663..27866,28580..28659,29047..29131,29427..29522,30091..31281)
location: region:20269-31281:1
so has part: feature:20269-21705:1:exon
so has part: feature:22361-22433:1:exon
so has part: feature:22544-22640:1:exon
so has part: feature:23061-23235:1:exon
so has part: feature:24197-24300:1:exon
so has part: feature:24586-24821:1:exon
so has part: feature:25153-25207:1:exon
so has part: feature:25363-25401:1:exon
so has part: feature:25507-25591:1:exon
so has part: feature:26084-26236:1:exon
so has part: feature:27063-27194:1:exon
so has part: feature:27663-27866:1:exon
so has part: feature:28580-28659:1:exon
so has part: feature:29047-29131:1:exon
so has part: feature:29427-29522:1:exon
so has part: feature:30091-31281:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:20269-21705:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:22361-22433:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:22544-22640:1:exon

position:22544:1
position: 22544
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:23061-23235:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:24197-24300:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:24586-24821:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:25153-25207:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:25363-25401:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:25507-25591:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:26084-26236:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:27063-27194:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:27663-27866:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:28580-28659:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:29047-29131:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:29427-29522:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:30091-31281:1:exon

SENP1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 87175
gene: SENP1
product: SUMO specific peptidase 1, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 ESTs, 10 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_030967151.1
SIO_010081: SENP1
subclass of: SO_0000673
so part of: SENP1
location: join(20271..21705,22361..22433,22529..22640,23100..23235,24197..24300,24586..24821,25153..25207,25363..25401,25507..25591,26084..26236,27063..27194,27663..27866,28580..28659,29047..29131,29427..29522,30091..31281)
location: region:20271-31281:1
so has part: feature:20271-21705:1:exon
so has part: feature:22361-22433:1:exon
so has part: feature:22529-22640:1:exon
so has part: feature:23100-23235:1:exon
so has part: feature:24197-24300:1:exon
so has part: feature:24586-24821:1:exon
so has part: feature:25153-25207:1:exon
so has part: feature:25363-25401:1:exon
so has part: feature:25507-25591:1:exon
so has part: feature:26084-26236:1:exon
so has part: feature:27063-27194:1:exon
so has part: feature:27663-27866:1:exon
so has part: feature:28580-28659:1:exon
so has part: feature:29047-29131:1:exon
so has part: feature:29427-29522:1:exon
so has part: feature:30091-31281:1:exon

position:20271:1
position: 20271
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:20271-21705:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:22361-22433:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:22529-22640:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:23100-23235:1:exon

position:23100:1
position: 23100
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:24197-24300:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:24586-24821:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:25153-25207:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:25363-25401:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:25507-25591:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:26084-26236:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:27063-27194:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:27663-27866:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:28580-28659:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:29047-29131:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:29427-29522:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:30091-31281:1:exon

SENP1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 87175
gene: SENP1
product: SUMO specific peptidase 1, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 ESTs, 13 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XM_030967152.1
SIO_010081: SENP1
subclass of: SO_0000673
so part of: SENP1
location: join(20272..21705,22361..22433,22544..22640,23100..23235,24197..24300,24586..24821,25153..25207,25363..25401,25507..25591,26084..26236,27063..27194,27663..27866,28580..28659,29047..29131,29427..29522,30091..31281)
location: region:20272-31281:1
so has part: feature:20272-21705:1:exon
so has part: feature:22361-22433:1:exon
so has part: feature:22544-22640:1:exon
so has part: feature:23100-23235:1:exon
so has part: feature:24197-24300:1:exon
so has part: feature:24586-24821:1:exon
so has part: feature:25153-25207:1:exon
so has part: feature:25363-25401:1:exon
so has part: feature:25507-25591:1:exon
so has part: feature:26084-26236:1:exon
so has part: feature:27063-27194:1:exon
so has part: feature:27663-27866:1:exon
so has part: feature:28580-28659:1:exon
so has part: feature:29047-29131:1:exon
so has part: feature:29427-29522:1:exon
so has part: feature:30091-31281:1:exon

position:20272:1
position: 20272
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:20272-21705:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:22361-22433:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:22544-22640:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:23100-23235:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:24197-24300:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:24586-24821:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:25153-25207:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:25363-25401:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:25507-25591:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:26084-26236:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:27063-27194:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:27663-27866:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:28580-28659:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:29047-29131:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:29427-29522:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:30091-31281:1:exon

SENP1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 87175
gene: SENP1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: sentrin-specific protease 1 isoform X1
translation: MRMEAREAARARPGLAFKGFGAESKFFLPKLSSFSCPAGNSSCSLSYTPVFFPSEIPERFPGANGQWRSSKPRGSRGSFLETRKNSRICNKPAVFFLPSSGNPSAFGGKSALHGASFPLKPAPSPSWSRRSPKKAPRRFLSAAEETVREEEREIYRQLLQMVTGKRFSSCKPSPLLPFHPSRCPRSGSSLPQEAPREDPEALEIHKIPAPVPHSPEPPQNSQNPPLGPCPGFPGGFQPRNSTALQQREEEPGAEAQSEGSDSVILLKVKDSRTPAPSLPFFQAELWIKELTSVYDSRARERWRQIEEQKALALQLQSQRLQEQERPVQDLVDLHLRVPLEKEIPVAVGPEGPDRARPGQGDDDFPEITEEMEKEIKSLFRGGNQDEVLSEAFRLTITRKDIQTLNNLNWLNDEIINFYMNLLMERSKDKDLPAVHAFNTFFFTKLKTAGYQAVKRWTKKVDIFSVDLLLVPIHLGVHWCLAVVDFRKKTITYYDSMGGINSEACRILLQYLKQESLDKKRKEFDTNGWALLSKKSQEIPQQMNGSDCGMFACRYAECISKDKPINFTQQHMPYFRKRMAWEILHRKLL
SIO_010081: SENP1
subclass of: SO_0000673
so part of: SENP1
location: join(21631..21705,22361..22433,22529..22640,23061..23235,24197..24300,24586..24821,25153..25207,25363..25401,25507..25591,26084..26236,27063..27194,27663..27866,28580..28659,29047..29131,29427..29522,30091..30153)
location: region:21631-30153:1
so has part: feature:21631-21705:1:exon
so has part: feature:22361-22433:1:exon
so has part: feature:22529-22640:1:exon
so has part: feature:23061-23235:1:exon
so has part: feature:24197-24300:1:exon
so has part: feature:24586-24821:1:exon
so has part: feature:25153-25207:1:exon
so has part: feature:25363-25401:1:exon
so has part: feature:25507-25591:1:exon
so has part: feature:26084-26236:1:exon
so has part: feature:27063-27194:1:exon
so has part: feature:27663-27866:1:exon
so has part: feature:28580-28659:1:exon
so has part: feature:29047-29131:1:exon
so has part: feature:29427-29522:1:exon
so has part: feature:30091-30153:1:exon

XP_030823009.1
type: Protein
SIO_000068: ncbiprotein

position:21631:1
position: 21631
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:30153:1
position: 30153
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:21631-21705:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:22361-22433:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:22529-22640:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:23061-23235:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:24197-24300:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:24586-24821:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:25153-25207:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:25363-25401:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:25507-25591:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:26084-26236:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:27063-27194:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:27663-27866:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:28580-28659:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:29047-29131:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:29427-29522:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:30091-30153:1:exon

SENP1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 87175
gene: SENP1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: sentrin-specific protease 1 isoform X3
translation: MRMEAREAARARPGLAFKGFGAESKFFLPKLSSFSCPAGNSSCSLSYTPVFFPSEIPERFPGANGQWRSSKPRGSRGSFLETRKNSSGNPSAFGGKSALHGASFPLKPAPSPSWSRRSPKKAPRRFLSAAEETVREEEREIYRQLLQMVTGKRFSSCKPSPLLPFHPSRCPRSGSSLPQEAPREDPEALEIHKIPAPVPHSPEPPQNSQNPPLGPCPGFPGGFQPRNSTALQQREEEPGAEAQSEGSDSVILLKVKDSRTPAPSLPFFQAELWIKELTSVYDSRARERWRQIEEQKALALQLQSQRLQEQERPVQDLVDLHLRVPLEKEIPVAVGPEGPDRARPGQGDDDFPEITEEMEKEIKSLFRGGNQDEVLSEAFRLTITRKDIQTLNNLNWLNDEIINFYMNLLMERSKDKDLPAVHAFNTFFFTKLKTAGYQAVKRWTKKVDIFSVDLLLVPIHLGVHWCLAVVDFRKKTITYYDSMGGINSEACRILLQYLKQESLDKKRKEFDTNGWALLSKKSQEIPQQMNGSDCGMFACRYAECISKDKPINFTQQHMPYFRKRMAWEILHRKLL
SIO_010081: SENP1
subclass of: SO_0000673
so part of: SENP1
location: join(21631..21705,22361..22433,22529..22640,23100..23235,24197..24300,24586..24821,25153..25207,25363..25401,25507..25591,26084..26236,27063..27194,27663..27866,28580..28659,29047..29131,29427..29522,30091..30153)
location: region:21631-30153:1
so has part: feature:21631-21705:1:exon
so has part: feature:22361-22433:1:exon
so has part: feature:22529-22640:1:exon
so has part: feature:23100-23235:1:exon
so has part: feature:24197-24300:1:exon
so has part: feature:24586-24821:1:exon
so has part: feature:25153-25207:1:exon
so has part: feature:25363-25401:1:exon
so has part: feature:25507-25591:1:exon
so has part: feature:26084-26236:1:exon
so has part: feature:27063-27194:1:exon
so has part: feature:27663-27866:1:exon
so has part: feature:28580-28659:1:exon
so has part: feature:29047-29131:1:exon
so has part: feature:29427-29522:1:exon
so has part: feature:30091-30153:1:exon

XP_030823011.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:21631-21705:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:22361-22433:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:22529-22640:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:23100-23235:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:24197-24300:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:24586-24821:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:25153-25207:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:25363-25401:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:25507-25591:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:26084-26236:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:27063-27194:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:27663-27866:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:28580-28659:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:29047-29131:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:29427-29522:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:30091-30153:1:exon

SENP1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 87175
gene: SENP1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: sentrin-specific protease 1 isoform X2
translation: MRMEAREAARARPGLAFKGFGAESKFFLPKLSSFSCPAGNSSCSLSYTPEIPERFPGANGQWRSSKPRGSRGSFLETRKNSRICNKPAVFFLPSSGNPSAFGGKSALHGASFPLKPAPSPSWSRRSPKKAPRRFLSAAEETVREEEREIYRQLLQMVTGKRFSSCKPSPLLPFHPSRCPRSGSSLPQEAPREDPEALEIHKIPAPVPHSPEPPQNSQNPPLGPCPGFPGGFQPRNSTALQQREEEPGAEAQSEGSDSVILLKVKDSRTPAPSLPFFQAELWIKELTSVYDSRARERWRQIEEQKALALQLQSQRLQEQERPVQDLVDLHLRVPLEKEIPVAVGPEGPDRARPGQGDDDFPEITEEMEKEIKSLFRGGNQDEVLSEAFRLTITRKDIQTLNNLNWLNDEIINFYMNLLMERSKDKDLPAVHAFNTFFFTKLKTAGYQAVKRWTKKVDIFSVDLLLVPIHLGVHWCLAVVDFRKKTITYYDSMGGINSEACRILLQYLKQESLDKKRKEFDTNGWALLSKKSQEIPQQMNGSDCGMFACRYAECISKDKPINFTQQHMPYFRKRMAWEILHRKLL
SIO_010081: SENP1
subclass of: SO_0000673
so part of: SENP1
location: join(21631..21705,22361..22433,22544..22640,23061..23235,24197..24300,24586..24821,25153..25207,25363..25401,25507..25591,26084..26236,27063..27194,27663..27866,28580..28659,29047..29131,29427..29522,30091..30153)
location: region:21631-30153:1
so has part: feature:21631-21705:1:exon
so has part: feature:22361-22433:1:exon
so has part: feature:22544-22640:1:exon
so has part: feature:23061-23235:1:exon
so has part: feature:24197-24300:1:exon
so has part: feature:24586-24821:1:exon
so has part: feature:25153-25207:1:exon
so has part: feature:25363-25401:1:exon
so has part: feature:25507-25591:1:exon
so has part: feature:26084-26236:1:exon
so has part: feature:27063-27194:1:exon
so has part: feature:27663-27866:1:exon
so has part: feature:28580-28659:1:exon
so has part: feature:29047-29131:1:exon
so has part: feature:29427-29522:1:exon
so has part: feature:30091-30153:1:exon

XP_030823010.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:21631-21705:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:22361-22433:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:22544-22640:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:23061-23235:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:24197-24300:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:24586-24821:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:25153-25207:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:25363-25401:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:25507-25591:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:26084-26236:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:27063-27194:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:27663-27866:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:28580-28659:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:29047-29131:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:29427-29522:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:30091-30153:1:exon

SENP1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 87175
gene: SENP1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: sentrin-specific protease 1 isoform X4
translation: MRMEAREAARARPGLAFKGFGAESKFFLPKLSSFSCPAGNSSCSLSYTPEIPERFPGANGQWRSSKPRGSRGSFLETRKNSSGNPSAFGGKSALHGASFPLKPAPSPSWSRRSPKKAPRRFLSAAEETVREEEREIYRQLLQMVTGKRFSSCKPSPLLPFHPSRCPRSGSSLPQEAPREDPEALEIHKIPAPVPHSPEPPQNSQNPPLGPCPGFPGGFQPRNSTALQQREEEPGAEAQSEGSDSVILLKVKDSRTPAPSLPFFQAELWIKELTSVYDSRARERWRQIEEQKALALQLQSQRLQEQERPVQDLVDLHLRVPLEKEIPVAVGPEGPDRARPGQGDDDFPEITEEMEKEIKSLFRGGNQDEVLSEAFRLTITRKDIQTLNNLNWLNDEIINFYMNLLMERSKDKDLPAVHAFNTFFFTKLKTAGYQAVKRWTKKVDIFSVDLLLVPIHLGVHWCLAVVDFRKKTITYYDSMGGINSEACRILLQYLKQESLDKKRKEFDTNGWALLSKKSQEIPQQMNGSDCGMFACRYAECISKDKPINFTQQHMPYFRKRMAWEILHRKLL
SIO_010081: SENP1
subclass of: SO_0000673
so part of: SENP1
location: join(21631..21705,22361..22433,22544..22640,23100..23235,24197..24300,24586..24821,25153..25207,25363..25401,25507..25591,26084..26236,27063..27194,27663..27866,28580..28659,29047..29131,29427..29522,30091..30153)
location: region:21631-30153:1
so has part: feature:21631-21705:1:exon
so has part: feature:22361-22433:1:exon
so has part: feature:22544-22640:1:exon
so has part: feature:23100-23235:1:exon
so has part: feature:24197-24300:1:exon
so has part: feature:24586-24821:1:exon
so has part: feature:25153-25207:1:exon
so has part: feature:25363-25401:1:exon
so has part: feature:25507-25591:1:exon
so has part: feature:26084-26236:1:exon
so has part: feature:27063-27194:1:exon
so has part: feature:27663-27866:1:exon
so has part: feature:28580-28659:1:exon
so has part: feature:29047-29131:1:exon
so has part: feature:29427-29522:1:exon
so has part: feature:30091-30153:1:exon

XP_030823012.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:21631-21705:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:22361-22433:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:22544-22640:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:23100-23235:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:24197-24300:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:24586-24821:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:25153-25207:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:25363-25401:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:25507-25591:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:26084-26236:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:27063-27194:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:27663-27866:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:28580-28659:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:29047-29131:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:29427-29522:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:30091-30153:1:exon

LOC115914537
type: Gene
subclass of: SO_0000704
RO_0002162: 87175
gene: LOC115914537
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 36385..56127
location: region:36385-56127:1
so has part: feature:36385-56127:1:exon
subclass of: SO_0000010

115914537
type: Gene
SIO_000068: ncbigene

position:36385:1
position: 36385
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:56127:1
position: 56127
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:36385-56127:1:exon

LOC115914537
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 87175
gene: LOC115914537
product: collagen alpha-1(II) chain-like
exception: unclassified transcription discrepancy
note: The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: deleted 2 bases in 2 codons; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 15 ESTs, 37 Proteins, and 98% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_030967086.1
SIO_010081: LOC115914537
subclass of: SO_0000673
so part of: LOC115914537
location: join(36385..36801,38523..38726,39397..39413,39631..39663,39782..39814,39944..39997,40141..40255,40626..40703,40947..40991,41074..41127,41217..41270,41387..41440,41524..41577,41672..41725,42206..42250,42364..42417,42524..42568,42688..42741,42822..42920,43048..43092,43446..43544,43932..43985,44736..44843,45008..45061,45164..45262,45934..45987,46360..46458,46536..46589,46734..46787,46994..47047,47153..47206,47296..47340,47728..47830,47915..48022,48111..48164,48327..48380,48769..48822,48905..48958,49048..49155,49274..49327,49405..49458,49909..50070,50163..50270,50696..50803,50983..51036,51146..51253,51575..51628,51756..51863,51978..52031,52149..52256,52368..52656,53022..53209,54568..54810,55414..56127)
location: region:36385-56127:1
so has part: feature:36385-36801:1:exon
so has part: feature:38523-38726:1:exon
so has part: feature:39397-39413:1:exon
so has part: feature:39631-39663:1:exon
so has part: feature:39782-39814:1:exon
so has part: feature:39944-39997:1:exon
so has part: feature:40141-40255:1:exon
so has part: feature:40626-40703:1:exon
so has part: feature:40947-40991:1:exon
so has part: feature:41074-41127:1:exon
so has part: feature:41217-41270:1:exon
so has part: feature:41387-41440:1:exon
so has part: feature:41524-41577:1:exon
so has part: feature:41672-41725:1:exon
so has part: feature:42206-42250:1:exon
so has part: feature:42364-42417:1:exon
so has part: feature:42524-42568:1:exon
so has part: feature:42688-42741:1:exon
so has part: feature:42822-42920:1:exon
so has part: feature:43048-43092:1:exon
so has part: feature:43446-43544:1:exon
so has part: feature:43932-43985:1:exon
so has part: feature:44736-44843:1:exon
so has part: feature:45008-45061:1:exon
so has part: feature:45164-45262:1:exon
so has part: feature:45934-45987:1:exon
so has part: feature:46360-46458:1:exon
so has part: feature:46536-46589:1:exon
so has part: feature:46734-46787:1:exon
so has part: feature:46994-47047:1:exon
so has part: feature:47153-47206:1:exon
so has part: feature:47296-47340:1:exon
so has part: feature:47728-47830:1:exon
so has part: feature:47915-48022:1:exon
so has part: feature:48111-48164:1:exon
so has part: feature:48327-48380:1:exon
so has part: feature:48769-48822:1:exon
so has part: feature:48905-48958:1:exon
so has part: feature:49048-49155:1:exon
so has part: feature:49274-49327:1:exon
so has part: feature:49405-49458:1:exon
so has part: feature:49909-50070:1:exon
so has part: feature:50163-50270:1:exon
so has part: feature:50696-50803:1:exon
so has part: feature:50983-51036:1:exon
so has part: feature:51146-51253:1:exon
so has part: feature:51575-51628:1:exon
so has part: feature:51756-51863:1:exon
so has part: feature:51978-52031:1:exon
so has part: feature:52149-52256:1:exon
so has part: feature:52368-52656:1:exon
so has part: feature:53022-53209:1:exon
so has part: feature:54568-54810:1:exon
so has part: feature:55414-56127:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:36385-36801:1:exon

position:36801:1
position: 36801
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:38523-38726:1:exon

position:38523:1
position: 38523
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:38726:1
position: 38726
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:39397-39413:1:exon

position:39397:1
position: 39397
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:39413:1
position: 39413
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:39631-39663:1:exon

position:39631:1
position: 39631
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:39663:1
position: 39663
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:39782-39814:1:exon

position:39782:1
position: 39782
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:39814:1
position: 39814
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:39944-39997:1:exon

position:39944:1
position: 39944
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:39997:1
position: 39997
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:40141-40255:1:exon

position:40141:1
position: 40141
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:40255:1
position: 40255
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:40626-40703:1:exon

position:40626:1
position: 40626
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:40703:1
position: 40703
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:40947-40991:1:exon

position:40947:1
position: 40947
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:40991:1
position: 40991
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:41074-41127:1:exon

position:41074:1
position: 41074
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:41127:1
position: 41127
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:41217-41270:1:exon

position:41217:1
position: 41217
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:41270:1
position: 41270
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:41387-41440:1:exon

position:41387:1
position: 41387
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:41440:1
position: 41440
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:41524-41577:1:exon

position:41524:1
position: 41524
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:41577:1
position: 41577
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:41672-41725:1:exon

position:41672:1
position: 41672
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:41725:1
position: 41725
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:42206-42250:1:exon

position:42206:1
position: 42206
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:42250:1
position: 42250
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:42364-42417:1:exon

position:42364:1
position: 42364
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:42417:1
position: 42417
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:42524-42568:1:exon

position:42524:1
position: 42524
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:42568:1
position: 42568
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:42688-42741:1:exon

position:42688:1
position: 42688
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:42741:1
position: 42741
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:42822-42920:1:exon

position:42822:1
position: 42822
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:42920:1
position: 42920
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:43048-43092:1:exon

position:43048:1
position: 43048
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:43092:1
position: 43092
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:43446-43544:1:exon

position:43446:1
position: 43446
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:43544:1
position: 43544
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 22
SIO_000628: feature:43932-43985:1:exon

position:43932:1
position: 43932
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:43985:1
position: 43985
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 23
SIO_000628: feature:44736-44843:1:exon

position:44736:1
position: 44736
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:44843:1
position: 44843
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 24
SIO_000628: feature:45008-45061:1:exon

position:45008:1
position: 45008
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:45061:1
position: 45061
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 25
SIO_000628: feature:45164-45262:1:exon

position:45164:1
position: 45164
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:45262:1
position: 45262
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 26
SIO_000628: feature:45934-45987:1:exon

position:45934:1
position: 45934
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:45987:1
position: 45987
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 27
SIO_000628: feature:46360-46458:1:exon

position:46360:1
position: 46360
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:46458:1
position: 46458
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 28
SIO_000628: feature:46536-46589:1:exon

position:46536:1
position: 46536
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:46589:1
position: 46589
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 29
SIO_000628: feature:46734-46787:1:exon

position:46734:1
position: 46734
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:46787:1
position: 46787
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 30
SIO_000628: feature:46994-47047:1:exon

position:46994:1
position: 46994
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:47047:1
position: 47047
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 31
SIO_000628: feature:47153-47206:1:exon

position:47153:1
position: 47153
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:47206:1
position: 47206
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 32
SIO_000628: feature:47296-47340:1:exon

position:47296:1
position: 47296
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:47340:1
position: 47340
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 33
SIO_000628: feature:47728-47830:1:exon

position:47728:1
position: 47728
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:47830:1
position: 47830
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 34
SIO_000628: feature:47915-48022:1:exon

position:47915:1
position: 47915
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:48022:1
position: 48022
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 35
SIO_000628: feature:48111-48164:1:exon

position:48111:1
position: 48111
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:48164:1
position: 48164
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 36
SIO_000628: feature:48327-48380:1:exon

position:48327:1
position: 48327
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:48380:1
position: 48380
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 37
SIO_000628: feature:48769-48822:1:exon

position:48769:1
position: 48769
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:48822:1
position: 48822
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 38
SIO_000628: feature:48905-48958:1:exon

position:48905:1
position: 48905
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:48958:1
position: 48958
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 39
SIO_000628: feature:49048-49155:1:exon

position:49048:1
position: 49048
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:49155:1
position: 49155
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 40
SIO_000628: feature:49274-49327:1:exon

position:49274:1
position: 49274
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:49327:1
position: 49327
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 41
SIO_000628: feature:49405-49458:1:exon

position:49405:1
position: 49405
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:49458:1
position: 49458
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 42
SIO_000628: feature:49909-50070:1:exon

position:49909:1
position: 49909
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:50070:1
position: 50070
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 43
SIO_000628: feature:50163-50270:1:exon

position:50163:1
position: 50163
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:50270:1
position: 50270
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 44
SIO_000628: feature:50696-50803:1:exon

position:50696:1
position: 50696
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:50803:1
position: 50803
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 45
SIO_000628: feature:50983-51036:1:exon

position:50983:1
position: 50983
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:51036:1
position: 51036
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 46
SIO_000628: feature:51146-51253:1:exon

position:51146:1
position: 51146
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:51253:1
position: 51253
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 47
SIO_000628: feature:51575-51628:1:exon

position:51575:1
position: 51575
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:51628:1
position: 51628
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 48
SIO_000628: feature:51756-51863:1:exon

position:51756:1
position: 51756
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:51863:1
position: 51863
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 49
SIO_000628: feature:51978-52031:1:exon

position:51978:1
position: 51978
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:52031:1
position: 52031
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 50
SIO_000628: feature:52149-52256:1:exon

position:52149:1
position: 52149
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:52256:1
position: 52256
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 51
SIO_000628: feature:52368-52656:1:exon

position:52368:1
position: 52368
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:52656:1
position: 52656
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 52
SIO_000628: feature:53022-53209:1:exon

position:53022:1
position: 53022
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:53209:1
position: 53209
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 53
SIO_000628: feature:54568-54810:1:exon

position:54568:1
position: 54568
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:54810:1
position: 54810
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 54
SIO_000628: feature:55414-56127:1:exon

position:55414:1
position: 55414
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC115914537
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 87175
gene: LOC115914537
exception: unclassified translation discrepancy
note: The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: deleted 2 bases in 2 codons; Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: LOW QUALITY PROTEIN: collagen alpha-1(II) chain-like
translation: MPGHRPAPGGRRSRRPEPAATGAVPGAAPRPGLLLLLLLCLAAAAAAQDRDLPEAGSCLQDGHRYSDKDVWKPEPCRICVCDTGTVLCDEIMCEELRDCPSPEIPFGECCPICPTEQPSGWKPGPKGQKGEPGDIKDVVGPRGPPGPQGPAGEQGQRGDRGEKGEKGTPGPRGRDGEPGTPGNPGPPAPPGPPGPPGPPGLGGGNFAAQMAGGFDEKAGGAQMGVMQGPMGPMGPRGPPGPSGSPGPQGFQGNPGEPGEPGAAGPMGPRGPPGPPGKPGDDGETGKPGKSGDRGPPGPQGARGFPGTPGLPGVKGHRGYPGLDGAKGEAGAPGAKGESGSPGENGSPGPMGPRGLPGERGRPGPSGAAGARGNDGLPGPAGPPGPVGPAGAPGFPGAPGSKGEAGPTGARGPEGAQGPRGESGTPGSPGPAGAPGNPGTDGIPGAKGSAGAPGIAGAPGFPGPRGPPGPQGATGPLGPKGQTGEPGIAGFKGEQGPKGETGPAGPQGAPGPAGEEGKRGARGEPGAAGPLGPPGERGAPGNRGFPGQDGLAGPKGAPGERGPAGLAGPKGATGDPGRPGEPGLPGARGLTGRPGDAGPQGKVGPTGAPGEDGRPGPPGPQGARGQPGVMGFPGPKGANGEPGKAGEKGLPGAPGLRGLPGKDGETGAAGPPGPAGPAGERGEQGAPGPSGFQGLPGTPGPPGESGKPGDQGVPGEAGAPGLVGPRGERGFPGERGSPGGAQGLQGPRGLPGTPGTDGPKGATGPAGPNGAQGPPGLQGMPGERGAAGIAGPKGDRGDVGEKGPEGAPGKDGARGLTGPIGPPGPAGPNGEKGESGPPGPSGAAGARGAPGERGEPGAPGPAGFAGPPGADGQPGAKGEQGEPGQKGDAGAPGPQGPSGAPGPQGPTGVTGPKGARGAQGPPGATGFPGAAGRVGPPGPNGNPGPPGPPGSAGKDGPKGARGDAGPPGRAGDPGLQGPAGPPGEKGEPGEDGPAGPDGPPGPQGLAGQRGIVGLPGQRGERGFPGLPGPSGEPGKQGAPGSAGDRGPPGPVGPPGLTGPAGEPGREGNPGADGPPGRDGAAGVKGDRGETGPVGAPGAPGAPGAPGPVGPTGKQGDRGETGAQGPMGPSGPAGARGMPGPQGPRGDKGEAGEAGERGLKGHRGFTGLQGLPGPPGPSGDQGAAGPAGPSGPRGPPGPVGPSGKDGSNGMPGPIGPPGPRGRSGEPGPAGPPGNPGPPGPPGPPGTGIDMSAFAGLGQPEKGPDPGRYMRADEAAPGLRPHDAEVDATLKALNNQIESIRSPEGSRKNPARTCRDIKLCHPDWKSGDYWIDPNQGCTLDAIKVFCNMATGETCVYPSPGSIPRKNWWSSKAKEKKHVWFGETINGGFHFSYGAEELAPNTANIQMTFLRLLSTEGSQNVTYHCRNSVAYLDEESGSLRKALLIQGSNDVEIRAEGNSRFTYSVLEDGCTKHTGKWGRTVIEYRSQKTSRLPIVDIAPMDIGGPEQEFGVDLGPVCFL
SIO_010081: LOC115914537
subclass of: SO_0000673
so part of: LOC115914537
location: join(36645..36801,38523..38726,39397..39413,39631..39663,39782..39814,39944..39997,40141..40255,40626..40703,40947..40991,41074..41127,41217..41270,41387..41440,41524..41577,41672..41725,42206..42250,42364..42417,42524..42568,42688..42741,42822..42920,43048..43092,43446..43544,43932..43985,44736..44843,45008..45061,45164..45262,45934..45987,46360..46458,46536..46589,46734..46787,46994..47047,47153..47206,47296..47340,47728..47830,47915..48022,48111..48164,48327..48380,48769..48822,48905..48958,49048..49155,49274..49327,49405..49458,49909..50070,50163..50270,50696..50803,50983..51036,51146..51253,51575..51628,51756..51863,51978..52031,52149..52256,52368..52656,53022..53209,54568..54810,55414..55560)
location: region:36645-55560:1
so has part: feature:36645-36801:1:exon
so has part: feature:38523-38726:1:exon
so has part: feature:39397-39413:1:exon
so has part: feature:39631-39663:1:exon
so has part: feature:39782-39814:1:exon
so has part: feature:39944-39997:1:exon
so has part: feature:40141-40255:1:exon
so has part: feature:40626-40703:1:exon
so has part: feature:40947-40991:1:exon
so has part: feature:41074-41127:1:exon
so has part: feature:41217-41270:1:exon
so has part: feature:41387-41440:1:exon
so has part: feature:41524-41577:1:exon
so has part: feature:41672-41725:1:exon
so has part: feature:42206-42250:1:exon
so has part: feature:42364-42417:1:exon
so has part: feature:42524-42568:1:exon
so has part: feature:42688-42741:1:exon
so has part: feature:42822-42920:1:exon
so has part: feature:43048-43092:1:exon
so has part: feature:43446-43544:1:exon
so has part: feature:43932-43985:1:exon
so has part: feature:44736-44843:1:exon
so has part: feature:45008-45061:1:exon
so has part: feature:45164-45262:1:exon
so has part: feature:45934-45987:1:exon
so has part: feature:46360-46458:1:exon
so has part: feature:46536-46589:1:exon
so has part: feature:46734-46787:1:exon
so has part: feature:46994-47047:1:exon
so has part: feature:47153-47206:1:exon
so has part: feature:47296-47340:1:exon
so has part: feature:47728-47830:1:exon
so has part: feature:47915-48022:1:exon
so has part: feature:48111-48164:1:exon
so has part: feature:48327-48380:1:exon
so has part: feature:48769-48822:1:exon
so has part: feature:48905-48958:1:exon
so has part: feature:49048-49155:1:exon
so has part: feature:49274-49327:1:exon
so has part: feature:49405-49458:1:exon
so has part: feature:49909-50070:1:exon
so has part: feature:50163-50270:1:exon
so has part: feature:50696-50803:1:exon
so has part: feature:50983-51036:1:exon
so has part: feature:51146-51253:1:exon
so has part: feature:51575-51628:1:exon
so has part: feature:51756-51863:1:exon
so has part: feature:51978-52031:1:exon
so has part: feature:52149-52256:1:exon
so has part: feature:52368-52656:1:exon
so has part: feature:53022-53209:1:exon
so has part: feature:54568-54810:1:exon
so has part: feature:55414-55560:1:exon

XP_030822946.1
type: Protein
SIO_000068: ncbiprotein

position:36645:1
position: 36645
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:55560:1
position: 55560
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:36645-36801:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:38523-38726:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:39397-39413:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:39631-39663:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:39782-39814:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:39944-39997:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:40141-40255:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:40626-40703:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:40947-40991:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:41074-41127:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:41217-41270:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:41387-41440:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:41524-41577:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:41672-41725:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:42206-42250:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:42364-42417:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:42524-42568:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:42688-42741:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:42822-42920:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:43048-43092:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:43446-43544:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:43932-43985:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:44736-44843:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:45008-45061:1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:45164-45262:1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:45934-45987:1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:46360-46458:1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:46536-46589:1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:46734-46787:1:exon

urn:…
SIO_000300: 30
SIO_000628: feature:46994-47047:1:exon

urn:…
SIO_000300: 31
SIO_000628: feature:47153-47206:1:exon

urn:…
SIO_000300: 32
SIO_000628: feature:47296-47340:1:exon

urn:…
SIO_000300: 33
SIO_000628: feature:47728-47830:1:exon

urn:…
SIO_000300: 34
SIO_000628: feature:47915-48022:1:exon

urn:…
SIO_000300: 35
SIO_000628: feature:48111-48164:1:exon

urn:…
SIO_000300: 36
SIO_000628: feature:48327-48380:1:exon

urn:…
SIO_000300: 37
SIO_000628: feature:48769-48822:1:exon

urn:…
SIO_000300: 38
SIO_000628: feature:48905-48958:1:exon

urn:…
SIO_000300: 39
SIO_000628: feature:49048-49155:1:exon

urn:…
SIO_000300: 40
SIO_000628: feature:49274-49327:1:exon

urn:…
SIO_000300: 41
SIO_000628: feature:49405-49458:1:exon

urn:…
SIO_000300: 42
SIO_000628: feature:49909-50070:1:exon

urn:…
SIO_000300: 43
SIO_000628: feature:50163-50270:1:exon

urn:…
SIO_000300: 44
SIO_000628: feature:50696-50803:1:exon

urn:…
SIO_000300: 45
SIO_000628: feature:50983-51036:1:exon

urn:…
SIO_000300: 46
SIO_000628: feature:51146-51253:1:exon

urn:…
SIO_000300: 47
SIO_000628: feature:51575-51628:1:exon

urn:…
SIO_000300: 48
SIO_000628: feature:51756-51863:1:exon

urn:…
SIO_000300: 49
SIO_000628: feature:51978-52031:1:exon

urn:…
SIO_000300: 50
SIO_000628: feature:52149-52256:1:exon

urn:…
SIO_000300: 51
SIO_000628: feature:52368-52656:1:exon

urn:…
SIO_000300: 52
SIO_000628: feature:53022-53209:1:exon

urn:…
SIO_000300: 53
SIO_000628: feature:54568-54810:1:exon

urn:…
SIO_000300: 54
SIO_000628: feature:55414-55560:1:exon

TMEM106C
type: Gene
subclass of: SO_0000704
RO_0002162: 87175
gene: TMEM106C
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(57843..61259)
location: region:57843-61259:-1
so has part: feature:57843-61259:-1:exon
subclass of: SO_0000010

115914628
type: Gene
SIO_000068: ncbigene

position:57843:-1
position: 57843
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:61259:-1
position: 61259
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:57843-61259:-1:exon

TMEM106C
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 87175
gene: TMEM106C
product: transmembrane protein 106C, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_030967253.1
SIO_010081: TMEM106C
subclass of: SO_0000673
so part of: TMEM106C
location: complement(join(57843..58746,59081..59134,59383..59432,59576..59716,59842..59956,60312..60375,60504..60754,61202..61259))
location: region:57843-61259:-1
so has part: feature:61202-61259:-1:exon
so has part: feature:60504-60754:-1:exon
so has part: feature:60312-60375:-1:exon
so has part: feature:59842-59956:-1:exon
so has part: feature:59576-59716:-1:exon
so has part: feature:59383-59432:-1:exon
so has part: feature:59081-59134:-1:exon
so has part: feature:57843-58746:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:61202-61259:-1:exon

position:61202:-1
position: 61202
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:60504-60754:-1:exon

position:60504:-1
position: 60504
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:60754:-1
position: 60754
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:60312-60375:-1:exon

position:60312:-1
position: 60312
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:60375:-1
position: 60375
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:59842-59956:-1:exon

position:59842:-1
position: 59842
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:59956:-1
position: 59956
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:59576-59716:-1:exon

position:59576:-1
position: 59576
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:59716:-1
position: 59716
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:59383-59432:-1:exon

position:59383:-1
position: 59383
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:59432:-1
position: 59432
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:59081-59134:-1:exon

position:59081:-1
position: 59081
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:59134:-1
position: 59134
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:57843-58746:-1:exon

position:58746:-1
position: 58746
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

TMEM106C
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 87175
gene: TMEM106C
product: transmembrane protein 106C, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 10 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_030967252.1
SIO_010081: TMEM106C
subclass of: SO_0000673
so part of: TMEM106C
location: complement(join(57843..58746,59081..59134,59383..59432,59576..59716,59797..59956,60312..60375,60504..60754,61202..61259))
location: region:57843-61259:-1
so has part: feature:61202-61259:-1:exon
so has part: feature:60504-60754:-1:exon
so has part: feature:60312-60375:-1:exon
so has part: feature:59797-59956:-1:exon
so has part: feature:59576-59716:-1:exon
so has part: feature:59383-59432:-1:exon
so has part: feature:59081-59134:-1:exon
so has part: feature:57843-58746:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:61202-61259:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:60504-60754:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:60312-60375:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:59797-59956:-1:exon

position:59797:-1
position: 59797
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:59576-59716:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:59383-59432:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:59081-59134:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:57843-58746:-1:exon

TMEM106C
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 87175
gene: TMEM106C
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: transmembrane protein 106C isoform X2
translation: MGSVRSLSAASAAPSHRKAEDEEDEEVLLSQEPVQDGAKIPYMEFTGQDSVTCPTCQGTGRIPTEQVNELVALIPYSDQRLRPQRTKLYVLLSVLLCLLLSGLGVFFLFPHSVLVDDDGIKVVQATLRIRNSNFYSVAVSSLSSQVQYMNTVVGRQQLTNVSSIQPLRDKLVNFTVKAELGGSLSYVYFFCTLPKVKVHNIVILMRTSVKLSYIGHSAQSTLETFHYLDCSSNSTAPARGAP
SIO_010081: TMEM106C
subclass of: SO_0000673
so part of: TMEM106C
location: complement(join(58635..58746,59081..59134,59383..59432,59576..59716,59842..59956,60312..60375,60504..60696))
location: region:58635-60696:-1
so has part: feature:60504-60696:-1:exon
so has part: feature:60312-60375:-1:exon
so has part: feature:59842-59956:-1:exon
so has part: feature:59576-59716:-1:exon
so has part: feature:59383-59432:-1:exon
so has part: feature:59081-59134:-1:exon
so has part: feature:58635-58746:-1:exon

XP_030823113.1
type: Protein
SIO_000068: ncbiprotein

position:58635:-1
position: 58635
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:60696:-1
position: 60696
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:60504-60696:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:60312-60375:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:59842-59956:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:59576-59716:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:59383-59432:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:59081-59134:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:58635-58746:-1:exon

TMEM106C
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 87175
gene: TMEM106C
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: transmembrane protein 106C isoform X1
translation: MGSVRSLSAASAAPSHRKAEDEEDEEVLLSQEPVQDGAKIPYMEFTGQDSVTCPTCQGTGRIPTEQVNELVALIPYSDQRLRPQRTKLYVLLSVLLCLLLSGLGVFFLFPHSVLVDDDGIKVVQVWFDRKNSAVLLAITATLRIRNSNFYSVAVSSLSSQVQYMNTVVGRQQLTNVSSIQPLRDKLVNFTVKAELGGSLSYVYFFCTLPKVKVHNIVILMRTSVKLSYIGHSAQSTLETFHYLDCSSNSTAPARGAP
SIO_010081: TMEM106C
subclass of: SO_0000673
so part of: TMEM106C
location: complement(join(58635..58746,59081..59134,59383..59432,59576..59716,59797..59956,60312..60375,60504..60696))
location: region:58635-60696:-1
so has part: feature:60504-60696:-1:exon
so has part: feature:60312-60375:-1:exon
so has part: feature:59797-59956:-1:exon
so has part: feature:59576-59716:-1:exon
so has part: feature:59383-59432:-1:exon
so has part: feature:59081-59134:-1:exon
so has part: feature:58635-58746:-1:exon

XP_030823112.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:60504-60696:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:60312-60375:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:59797-59956:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:59576-59716:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:59383-59432:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:59081-59134:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:58635-58746:-1:exon

VDR
type: Gene
subclass of: SO_0000704
RO_0002162: 87175
gene: VDR
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 65336..80092
location: region:65336-80092:1
so has part: feature:65336-80092:1:exon
subclass of: SO_0000010

115914631
type: Gene
SIO_000068: ncbigene

position:65336:1
position: 65336
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:80092:1
position: 80092
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:65336-80092:1:exon

VDR
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 87175
gene: VDR
product: vitamin D receptor
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 20 Proteins, and 96% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_030967257.1
SIO_010081: VDR
subclass of: SO_0000673
so part of: VDR
location: join(65336..65426,66480..66533,70962..71109,73358..73488,76842..77026,77135..77258,77626..77797,78201..78352,78645..78761,79238..80092)
location: region:65336-80092:1
so has part: feature:65336-65426:1:exon
so has part: feature:66480-66533:1:exon
so has part: feature:70962-71109:1:exon
so has part: feature:73358-73488:1:exon
so has part: feature:76842-77026:1:exon
so has part: feature:77135-77258:1:exon
so has part: feature:77626-77797:1:exon
so has part: feature:78201-78352:1:exon
so has part: feature:78645-78761:1:exon
so has part: feature:79238-80092:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:65336-65426:1:exon

position:65426:1
position: 65426
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:66480-66533:1:exon

position:66480:1
position: 66480
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:66533:1
position: 66533
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:70962-71109:1:exon

position:70962:1
position: 70962
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:71109:1
position: 71109
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:73358-73488:1:exon

position:73358:1
position: 73358
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:73488:1
position: 73488
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:76842-77026:1:exon

position:76842:1
position: 76842
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:77026:1
position: 77026
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:77135-77258:1:exon

position:77135:1
position: 77135
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:77258:1
position: 77258
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:77626-77797:1:exon

position:77626:1
position: 77626
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:77797:1
position: 77797
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:78201-78352:1:exon

position:78201:1
position: 78201
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:78352:1
position: 78352
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:78645-78761:1:exon

position:78645:1
position: 78645
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:78761:1
position: 78761
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:79238-80092:1:exon

position:79238:1
position: 79238
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

VDR
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 87175
gene: VDR
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: vitamin D3 receptor
translation: MDAACSTSVADAAAECERSVPRVCGVCGDRATGFHFNAMTCEGCKGFFRRSMKRKAMFTCPFSGECHITKDNRRHCQACRLKRCLDIGMMKEFILTDEEVQRKREMILKRKEEEALRESLKPKLSEEQQKVIDILLEAHRKTYDPTYADFTKFRPPVRSHPSSRGATKSSSLLTQDLSSEDSSDLFSSEAFSTFPDPAEPPPFPSLALQEEQDESSSVNLQFSQLSMLPHLADLVSYSIQKVIGFAKMIPGFRDLSVEDQIVLLKCSAMEVIMLRSNESFTLEDMSWTCGSNDFKYRVSDVTQAGHSMDLLEPLVKFQVGLKKLNLHEEEHVLLMAICILSPDRPGVREPLRVEALQERLSEVLQSYIRARHAAPGGRLLYAKMIQKLADLRSLNEEHSRQYRCLSFQPEHSMQLTPLLLEVFGNEIS
SIO_010081: VDR
subclass of: SO_0000673
so part of: VDR
location: join(70964..71109,73358..73488,76842..77026,77135..77258,77626..77797,78201..78352,78645..78761,79238..79497)
location: region:70964-79497:1
so has part: feature:70964-71109:1:exon
so has part: feature:73358-73488:1:exon
so has part: feature:76842-77026:1:exon
so has part: feature:77135-77258:1:exon
so has part: feature:77626-77797:1:exon
so has part: feature:78201-78352:1:exon
so has part: feature:78645-78761:1:exon
so has part: feature:79238-79497:1:exon

XP_030823117.1
type: Protein
SIO_000068: ncbiprotein

position:70964:1
position: 70964
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:79497:1
position: 79497
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:70964-71109:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:73358-73488:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:76842-77026:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:77135-77258:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:77626-77797:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:78201-78352:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:78645-78761:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:79238-79497:1:exon

C29H12orf10
type: Gene
subclass of: SO_0000704
RO_0002162: 87175
gene: C29H12orf10
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 80386..83066
location: region:80386-83066:1
so has part: feature:80386-83066:1:exon
subclass of: SO_0000010

115914624
type: Gene
SIO_000068: ncbigene

position:80386:1
position: 80386
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:83066:1
position: 83066
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:80386-83066:1:exon

C29H12orf10
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 87175
gene: C29H12orf10
product: chromosome 29 C12orf10 homolog, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XM_030967247.1
SIO_010081: C29H12orf10
subclass of: SO_0000673
so part of: C29H12orf10
location: join(80386..80576,80935..81047,81112..81271,81474..81623,81762..81815,82036..82217,82292..83066)
location: region:80386-83066:1
so has part: feature:80386-80576:1:exon
so has part: feature:80935-81047:1:exon
so has part: feature:81112-81271:1:exon
so has part: feature:81474-81623:1:exon
so has part: feature:81762-81815:1:exon
so has part: feature:82036-82217:1:exon
so has part: feature:82292-83066:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:80386-80576:1:exon

position:80576:1
position: 80576
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:80935-81047:1:exon

position:80935:1
position: 80935
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:81047:1
position: 81047
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:81112-81271:1:exon

position:81112:1
position: 81112
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:81271:1
position: 81271
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:81474-81623:1:exon

position:81474:1
position: 81474
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:81623:1
position: 81623
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:81762-81815:1:exon

position:81762:1
position: 81762
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:81815:1
position: 81815
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:82036-82217:1:exon

position:82036:1
position: 82036
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:82217:1
position: 82217
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:82292-83066:1:exon

position:82292:1
position: 82292
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

C29H12orf10
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 87175
gene: C29H12orf10
product: chromosome 29 C12orf10 homolog, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 8 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
transcript id: XM_030967246.1
SIO_010081: C29H12orf10
subclass of: SO_0000673
so part of: C29H12orf10
location: join(80386..80576,80935..81047,81112..81271,81474..81623,81693..81815,82036..82217,82292..82993)
location: region:80386-82993:1
so has part: feature:80386-80576:1:exon
so has part: feature:80935-81047:1:exon
so has part: feature:81112-81271:1:exon
so has part: feature:81474-81623:1:exon
so has part: feature:81693-81815:1:exon
so has part: feature:82036-82217:1:exon
so has part: feature:82292-82993:1:exon

position:82993:1
position: 82993
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:80386-80576:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:80935-81047:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:81112-81271:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:81474-81623:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:81693-81815:1:exon

position:81693:1
position: 81693
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:82036-82217:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:82292-82993:1:exon

C29H12orf10
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 87175
gene: C29H12orf10
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: UPF0160 protein MYG1, mitochondrial isoform X1
translation: MRGAVRAARLVVMAAAGTGTGTGHKRPHPEPAARIGTHDGTFHCDEALACFLLRLLPRYRDAEIVRTRDPQRLAGCDVVVDVGGEYDPGRHRYDHHQRSFTESMRSLRPDKPWSTKLSSAGLVYCHFGAQILAGLLGQPEDGPVVAALYDKLYENFVEEIDAMDNGIAPAAGEPRYALSTTLSARVGHLNPRWNDPDQDTEAGFRRAMELVGTEFLQRLDFYHQAWLPARALVEEAVRRRLEVDSSGQVLELSQGGCPWKEHLFQLEQELALPRPLLLVLFPDRGGQWRVQSVPTAPHSFQSRLPLPEAWRGLRDEALSELAGIPGCVFVHASGFIGGNRTREGALEMARRALELGGATEST
SIO_010081: C29H12orf10
subclass of: SO_0000673
so part of: C29H12orf10
location: join(80397..80576,80935..81047,81112..81271,81474..81623,81693..81815,82036..82217,82292..82472)
location: region:80397-82472:1
so has part: feature:80397-80576:1:exon
so has part: feature:80935-81047:1:exon
so has part: feature:81112-81271:1:exon
so has part: feature:81474-81623:1:exon
so has part: feature:81693-81815:1:exon
so has part: feature:82036-82217:1:exon
so has part: feature:82292-82472:1:exon

XP_030823106.1
type: Protein
SIO_000068: ncbiprotein

position:80397:1
position: 80397
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:82472:1
position: 82472
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:80397-80576:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:80935-81047:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:81112-81271:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:81474-81623:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:81693-81815:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:82036-82217:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:82292-82472:1:exon

C29H12orf10
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 87175
gene: C29H12orf10
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: UPF0160 protein MYG1, mitochondrial isoform X2
translation: MRGAVRAARLVVMAAAGTGTGTGHKRPHPEPAARIGTHDGTFHCDEALACFLLRLLPRYRDAEIVRTRDPQRLAGCDVVVDVGGEYDPGRHRYDHHQRSFTESMRSLRPDKPWSTKLSSAGLVYCHFGAQILAGLLGQPEDGPVVAALYDKLYENFVEEIDAMDNGIAPAAGEPRYALSTTLSARVGHLNPRWNDPDQDTEAWLPARALVEEAVRRRLEVDSSGQVLELSQGGCPWKEHLFQLEQELALPRPLLLVLFPDRGGQWRVQSVPTAPHSFQSRLPLPEAWRGLRDEALSELAGIPGCVFVHASGFIGGNRTREGALEMARRALELGGATEST
SIO_010081: C29H12orf10
subclass of: SO_0000673
so part of: C29H12orf10
location: join(80397..80576,80935..81047,81112..81271,81474..81623,81762..81815,82036..82217,82292..82472)
location: region:80397-82472:1
so has part: feature:80397-80576:1:exon
so has part: feature:80935-81047:1:exon
so has part: feature:81112-81271:1:exon
so has part: feature:81474-81623:1:exon
so has part: feature:81762-81815:1:exon
so has part: feature:82036-82217:1:exon
so has part: feature:82292-82472:1:exon

XP_030823107.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:80397-80576:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:80935-81047:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:81112-81271:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:81474-81623:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:81762-81815:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:82036-82217:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:82292-82472:1:exon

AAAS
type: Gene
subclass of: SO_0000704
RO_0002162: 87175
gene: AAAS
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(84085..90316)
location: region:84085-90316:-1
so has part: feature:84085-90316:-1:exon
subclass of: SO_0000010

115914576
type: Gene
SIO_000068: ncbigene

position:84085:-1
position: 84085
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:90316:-1
position: 90316
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:84085-90316:-1:exon

AAAS
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 87175
gene: AAAS
product: aladin WD repeat nucleoporin
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 ESTs, 10 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
transcript id: XM_030967155.1
SIO_010081: AAAS
subclass of: SO_0000673
so part of: AAAS
location: complement(join(84085..84432,85009..85093,85484..85565,85668..85735,85849..85942,86284..86374,86796..86856,87055..87179,87315..87435,87686..87829,88408..88506,88905..88951,89229..89320,89442..89497,89580..89707,89947..90082,90275..90316))
location: region:84085-90316:-1
so has part: feature:90275-90316:-1:exon
so has part: feature:89947-90082:-1:exon
so has part: feature:89580-89707:-1:exon
so has part: feature:89442-89497:-1:exon
so has part: feature:89229-89320:-1:exon
so has part: feature:88905-88951:-1:exon
so has part: feature:88408-88506:-1:exon
so has part: feature:87686-87829:-1:exon
so has part: feature:87315-87435:-1:exon
so has part: feature:87055-87179:-1:exon
so has part: feature:86796-86856:-1:exon
so has part: feature:86284-86374:-1:exon
so has part: feature:85849-85942:-1:exon
so has part: feature:85668-85735:-1:exon
so has part: feature:85484-85565:-1:exon
so has part: feature:85009-85093:-1:exon
so has part: feature:84085-84432:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:90275-90316:-1:exon

position:90275:-1
position: 90275
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:89947-90082:-1:exon

position:89947:-1
position: 89947
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:90082:-1
position: 90082
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:89580-89707:-1:exon

position:89580:-1
position: 89580
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:89707:-1
position: 89707
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:89442-89497:-1:exon

position:89442:-1
position: 89442
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:89497:-1
position: 89497
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:89229-89320:-1:exon

position:89229:-1
position: 89229
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:89320:-1
position: 89320
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:88905-88951:-1:exon

position:88905:-1
position: 88905
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:88951:-1
position: 88951
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:88408-88506:-1:exon

position:88408:-1
position: 88408
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:88506:-1
position: 88506
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:87686-87829:-1:exon

position:87686:-1
position: 87686
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:87829:-1
position: 87829
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:87315-87435:-1:exon

position:87315:-1
position: 87315
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:87435:-1
position: 87435
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:87055-87179:-1:exon

position:87055:-1
position: 87055
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:87179:-1
position: 87179
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:86796-86856:-1:exon

position:86796:-1
position: 86796
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:86856:-1
position: 86856
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:86284-86374:-1:exon

position:86284:-1
position: 86284
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:86374:-1
position: 86374
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:85849-85942:-1:exon

position:85849:-1
position: 85849
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:85942:-1
position: 85942
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:85668-85735:-1:exon

position:85668:-1
position: 85668
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:85735:-1
position: 85735
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:85484-85565:-1:exon

position:85484:-1
position: 85484
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:85565:-1
position: 85565
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:85009-85093:-1:exon

position:85009:-1
position: 85009
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:85093:-1
position: 85093
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:84085-84432:-1:exon

position:84432:-1
position: 84432
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

AAAS
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 87175
gene: AAAS
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: aladin
translation: MCSLGLFPPPPPPGDVTLYELNNALVCGRLSEQLPLAFQSQVPDLPVLTLPKEPLKAHGRLEPSARPPFIHHRESLWKRCLSAWRDAGLCGLLRELASADEEGLQWLRTGSSHALAVCRWLSSLHGSLFPHLSLTSEDMIAAFSQAVDWAGCTVRAFAWHPHTNKFAVALLDDSIRVYNSNSATVPSLKHRLQRNVAAMAWKPLCASILAVACQSCVLVWHLDPTSLSTRPSSGCAQVLSCPGHSPVTSLAWAPSGERLLSASPVDTAMLVWDVSTETCVQLQWFGGGGVTYLAWSPDGSKVLAATPSAVFRVWEAQMWTCERWPTIKGRCQTGCWSPDGSRLLFTVLGESVIYSLSFSEYRGEMQGQVGGSKTASIVADLSETTFETLYGEERIGGEVHSMVWDPTGERLAVIIRGHPECAGSQPAVAVFRTRNSPVFELLPCGFVRGERGARPQLISFHPCFPQGALLTVCWSSGRISHIPFFFVSALEPRGSPRRSPAPVLGSVREQPLFSEL
SIO_010081: AAAS
subclass of: SO_0000673
so part of: AAAS
location: complement(join(84298..84432,85009..85093,85484..85565,85668..85735,85849..85942,86284..86374,86796..86856,87055..87179,87315..87435,87686..87829,88408..88506,88905..88951,89229..89320,89442..89497,89580..89707,89947..90069))
location: region:84298-90069:-1
so has part: feature:89947-90069:-1:exon
so has part: feature:89580-89707:-1:exon
so has part: feature:89442-89497:-1:exon
so has part: feature:89229-89320:-1:exon
so has part: feature:88905-88951:-1:exon
so has part: feature:88408-88506:-1:exon
so has part: feature:87686-87829:-1:exon
so has part: feature:87315-87435:-1:exon
so has part: feature:87055-87179:-1:exon
so has part: feature:86796-86856:-1:exon
so has part: feature:86284-86374:-1:exon
so has part: feature:85849-85942:-1:exon
so has part: feature:85668-85735:-1:exon
so has part: feature:85484-85565:-1:exon
so has part: feature:85009-85093:-1:exon
so has part: feature:84298-84432:-1:exon

XP_030823015.1
type: Protein
SIO_000068: ncbiprotein

position:84298:-1
position: 84298
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:90069:-1
position: 90069
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:89947-90069:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:89580-89707:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:89442-89497:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:89229-89320:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:88905-88951:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:88408-88506:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:87686-87829:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:87315-87435:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:87055-87179:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:86796-86856:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:86284-86374:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:85849-85942:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:85668-85735:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:85484-85565:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:85009-85093:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:84298-84432:-1:exon

SP7
type: Gene
subclass of: SO_0000704
RO_0002162: 87175
gene: SP7
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(92457..95776)
location: region:92457-95776:-1
so has part: feature:92457-95776:-1:exon
subclass of: SO_0000010

115914629
type: Gene
SIO_000068: ncbigene

position:92457:-1
position: 92457
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:95776:-1
position: 95776
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:92457-95776:-1:exon

SP7
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 87175
gene: SP7
product: Sp7 transcription factor
exception: unclassified transcription discrepancy
note: The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: deleted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 11 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_030967254.1
SIO_010081: SP7
subclass of: SO_0000673
so part of: SP7
location: complement(join(92457..93938,95690..95776))
location: region:92457-95776:-1
so has part: feature:95690-95776:-1:exon
so has part: feature:92457-93938:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:95690-95776:-1:exon

position:95690:-1
position: 95690
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:92457-93938:-1:exon

position:93938:-1
position: 93938
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

SP7
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 87175
gene: SP7
exception: unclassified translation discrepancy
note: The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: deleted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: LOW QUALITY PROTEIN: transcription factor Sp7
translation: MGDSYAAAFPSAPGLLSPSASPQASPGPYGPDYGPFGHPFPAPSGAQEVLGAPVVVAAKGHPPSECLPGVYPSLEMPHPYGSWYKGGIGGGLPGGSGPAAPSWWDVHPNGGWLGGPAGAEGLQGSLQGQPALSPPLPTYGSDFGALNPPPYTNAPAAPPAPKPAPGETPKGPRGGSLGGRPACDCPNCQELERLGGPAGSRRKPVHSCHIPGCGKVYGKASHLKAHLRWHTGERPFVCNWLFCGKRFTRSDELERHVRTHTREKKFTCLLCSKRFTRSDHLSKHQKTHADPGPPKPPPGAEQPPASPRPASPAKDGGSPEAGSLLEI
SIO_010081: SP7
subclass of: SO_0000673
so part of: SP7
location: complement(92850..93834)
location: region:92850-93834:-1
so has part: feature:92850-93834:-1:exon

XP_030823114.1
type: Protein
SIO_000068: ncbiprotein

position:92850:-1
position: 92850
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:93834:-1
position: 93834
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:92850-93834:-1:exon

SP1
type: Gene
subclass of: SO_0000704
RO_0002162: 87175
gene: SP1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 102339..113836
location: region:102339-113836:1
so has part: feature:102339-113836:1:exon
subclass of: SO_0000010

115914650
type: Gene
SIO_000068: ncbigene

position:102339:1
position: 102339
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:113836:1
position: 113836
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:102339-113836:1:exon

SP1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 87175
gene: SP1
product: Sp1 transcription factor, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 8 ESTs, 8 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
transcript id: XM_030967281.1
SIO_010081: SP1
subclass of: SO_0000673
so part of: SP1
location: join(102339..102412,103426..103520,104106..105603,111889..112057,112699..112898,113297..113836)
location: region:102339-113836:1
so has part: feature:102339-102412:1:exon
so has part: feature:103426-103520:1:exon
so has part: feature:104106-105603:1:exon
so has part: feature:111889-112057:1:exon
so has part: feature:112699-112898:1:exon
so has part: feature:113297-113836:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:102339-102412:1:exon

position:102412:1
position: 102412
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:103426-103520:1:exon

position:103426:1
position: 103426
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:103520:1
position: 103520
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:104106-105603:1:exon

position:104106:1
position: 104106
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:105603:1
position: 105603
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:111889-112057:1:exon

position:111889:1
position: 111889
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:112057:1
position: 112057
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:112699-112898:1:exon

position:112699:1
position: 112699
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:112898:1
position: 112898
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:113297-113836:1:exon

position:113297:1
position: 113297
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

SP1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 87175
gene: SP1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: transcription factor Sp1 isoform X1
translation: MSDQESTEEMSAVKPDKGEGDASSTSSAGGGEAQESQPSPLALLAATCSRIESPNENSNSSQGQQGGSGELDLNAAAAQLTQSANGWQIISAGSSTPTGSKEPGSNGSNGGDASKSRPVSTGPYVVTSASGLQNQQVLTGLPGVIPNIQYQVIPQFQTIDGQQLQFATTPAQVNVQQDASGQLQIIPGSNQQIITSRAGGSNLIAMPNLLQQAVPIQGVGLANNSLSGQTQYVANVPVALNGNITLLPVNSVAASLAPTSQTGTLSSSGSPDSSSQPATSGAASSSASTATSQASSGAFFTNANSYSTTTTTSNVGVMNFSTSATVGTNVQAQTPQRASSVPSSDSLQTPVSGVALQPGQQKEGDQSQQSQQQQQQILIQPQLVQGGQTIQALQTTPLSGQTFATQAISQDTLQNLQLQAVPNSGPIIIRTPTVGPNGQVSWQTIQLQNLQVQNPQAQTITLAPMQGVSLGQTGSTSTTLTPIASLPSGTVTVNAAQLSSVPGLQTINLSALGASGIQVHQLQGLPLAIANAPGEHGAQLGLHGGSGDGLGDESTAVEEGETSPDPQPQQGRKTRREACTCPYCKEGEGRSSGDPGKKKQHICHVPGCGKVYGKTSHLRAHLRWHTGERPFICTWVLCGKRFTRSDELQRHKRTHTGEKKFACPECPKRFMRSDHLSKHIKTHQNKKGGAASVAMNVSAVPMDTAASAEGNGGATPSALIATNMVAMEAICPEGIARLASSGINVMQVADLQSINISGNGF
SIO_010081: SP1
subclass of: SO_0000673
so part of: SP1
location: join(102406..102412,103426..103520,104106..105603,111889..112057,112699..112898,113297..113613)
location: region:102406-113613:1
so has part: feature:102406-102412:1:exon
so has part: feature:103426-103520:1:exon
so has part: feature:104106-105603:1:exon
so has part: feature:111889-112057:1:exon
so has part: feature:112699-112898:1:exon
so has part: feature:113297-113613:1:exon

XP_030823141.1
type: Protein
SIO_000068: ncbiprotein

position:102406:1
position: 102406
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:113613:1
position: 113613
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:102406-102412:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:103426-103520:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:104106-105603:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:111889-112057:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:112699-112898:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:113297-113613:1:exon

SP1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 87175
gene: SP1
product: Sp1 transcription factor, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 8 ESTs, 6 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
transcript id: XM_030967282.1
SIO_010081: SP1
subclass of: SO_0000673
so part of: SP1
location: join(102878..103013,103426..103520,104106..105603,111889..112057,112699..112898,113297..113836)
location: region:102878-113836:1
so has part: feature:102878-103013:1:exon
so has part: feature:103426-103520:1:exon
so has part: feature:104106-105603:1:exon
so has part: feature:111889-112057:1:exon
so has part: feature:112699-112898:1:exon
so has part: feature:113297-113836:1:exon

position:102878:1
position: 102878
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:102878-103013:1:exon

position:103013:1
position: 103013
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:103426-103520:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:104106-105603:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:111889-112057:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:112699-112898:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:113297-113836:1:exon

SP1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 87175
gene: SP1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: transcription factor Sp1 isoform X2
translation: MSAVKPDKGEGDASSTSSAGGGEAQESQPSPLALLAATCSRIESPNENSNSSQGQQGGSGELDLNAAAAQLTQSANGWQIISAGSSTPTGSKEPGSNGSNGGDASKSRPVSTGPYVVTSASGLQNQQVLTGLPGVIPNIQYQVIPQFQTIDGQQLQFATTPAQVNVQQDASGQLQIIPGSNQQIITSRAGGSNLIAMPNLLQQAVPIQGVGLANNSLSGQTQYVANVPVALNGNITLLPVNSVAASLAPTSQTGTLSSSGSPDSSSQPATSGAASSSASTATSQASSGAFFTNANSYSTTTTTSNVGVMNFSTSATVGTNVQAQTPQRASSVPSSDSLQTPVSGVALQPGQQKEGDQSQQSQQQQQQILIQPQLVQGGQTIQALQTTPLSGQTFATQAISQDTLQNLQLQAVPNSGPIIIRTPTVGPNGQVSWQTIQLQNLQVQNPQAQTITLAPMQGVSLGQTGSTSTTLTPIASLPSGTVTVNAAQLSSVPGLQTINLSALGASGIQVHQLQGLPLAIANAPGEHGAQLGLHGGSGDGLGDESTAVEEGETSPDPQPQQGRKTRREACTCPYCKEGEGRSSGDPGKKKQHICHVPGCGKVYGKTSHLRAHLRWHTGERPFICTWVLCGKRFTRSDELQRHKRTHTGEKKFACPECPKRFMRSDHLSKHIKTHQNKKGGAASVAMNVSAVPMDTAASAEGNGGATPSALIATNMVAMEAICPEGIARLASSGINVMQVADLQSINISGNGF
SIO_010081: SP1
subclass of: SO_0000673
so part of: SP1
location: join(103446..103520,104106..105603,111889..112057,112699..112898,113297..113613)
location: region:103446-113613:1
so has part: feature:103446-103520:1:exon
so has part: feature:104106-105603:1:exon
so has part: feature:111889-112057:1:exon
so has part: feature:112699-112898:1:exon
so has part: feature:113297-113613:1:exon

XP_030823142.1
type: Protein
SIO_000068: ncbiprotein

position:103446:1
position: 103446
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:103446-103520:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:104106-105603:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:111889-112057:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:112699-112898:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:113297-113613:1:exon

LOC115914449
type: Gene
subclass of: SO_0000704
RO_0002162: 87175
gene: LOC115914449
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 117605..123469
location: region:117605-123469:1
so has part: feature:117605-123469:1:exon
subclass of: SO_0000010

115914449
type: Gene
SIO_000068: ncbigene

position:117605:1
position: 117605
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:123469:1
position: 123469
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:117605-123469:1:exon

LOC115914449
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 87175
gene: LOC115914449
product: anti-Muellerian hormone type-2 receptor-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 5 Proteins, and 41% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_030966974.1
SIO_010081: LOC115914449
subclass of: SO_0000673
so part of: LOC115914449
location: join(117605..117617,117704..117853,118647..118820,119088..119177,119533..119645,120067..120291,120605..120719,120825..120985,121420..121567,121640..121776,122084..122497,122709..122745,122833..123161,123241..123469)
location: region:117605-123469:1
so has part: feature:117605-117617:1:exon
so has part: feature:117704-117853:1:exon
so has part: feature:118647-118820:1:exon
so has part: feature:119088-119177:1:exon
so has part: feature:119533-119645:1:exon
so has part: feature:120067-120291:1:exon
so has part: feature:120605-120719:1:exon
so has part: feature:120825-120985:1:exon
so has part: feature:121420-121567:1:exon
so has part: feature:121640-121776:1:exon
so has part: feature:122084-122497:1:exon
so has part: feature:122709-122745:1:exon
so has part: feature:122833-123161:1:exon
so has part: feature:123241-123469:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:117605-117617:1:exon

position:117617:1
position: 117617
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:117704-117853:1:exon

position:117704:1
position: 117704
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:117853:1
position: 117853
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:118647-118820:1:exon

position:118647:1
position: 118647
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:118820:1
position: 118820
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:119088-119177:1:exon

position:119088:1
position: 119088
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:119177:1
position: 119177
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:119533-119645:1:exon

position:119533:1
position: 119533
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:119645:1
position: 119645
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:120067-120291:1:exon

position:120067:1
position: 120067
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:120291:1
position: 120291
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:120605-120719:1:exon

position:120605:1
position: 120605
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:120719:1
position: 120719
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:120825-120985:1:exon

position:120825:1
position: 120825
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:120985:1
position: 120985
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:121420-121567:1:exon

position:121420:1
position: 121420
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:121567:1
position: 121567
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:121640-121776:1:exon

position:121640:1
position: 121640
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:121776:1
position: 121776
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:122084-122497:1:exon

position:122084:1
position: 122084
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:122497:1
position: 122497
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:122709-122745:1:exon

position:122709:1
position: 122709
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:122745:1
position: 122745
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:122833-123161:1:exon

position:122833:1
position: 122833
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:123161:1
position: 123161
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:123241-123469:1:exon

position:123241:1
position: 123241
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC115914449
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 87175
gene: LOC115914449
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: anti-Muellerian hormone type-2 receptor-like
translation: MGRPGPQNLTCVSYKHPSVRGALGHAGAAAAGAVRCPPGQCCVGIWNRSHALVQGCWGGRGDACPSATCAPSPAGHPGSSVLLCLCHGHLCNGNATGTAAAAGGLGGPRQGPVPGRGGSAGTLWLLGASPLLLILLICLGVLGLRRTRARMGQPPRGGRGSGVPPPEPPSPDLPALHFLQVLQSGRFSAVWRGTLRQRPVAIKAFAAGAGRRFAAERAVHSLPLMEHENVARLLHTRAAAPRARGGLLVLQLYPAGSLRHFLGQHVGTWAGSVRLALSLARGLAFLHQELWRDGLYKPSVVHRDLSSQNVLVREDGTCAIGDFGLALALPPRAQDSAGSRHSVAIRKAGTQRYLAPEILDESLDLRAWGRALRQADVYALGLLLWEILSRCQALSPGAPVPPFRLAYEAELGPSPSGAQLRRLAADERRRPLILAAWHRTPQAGGALPELLEDCWDPDPEARLSAERALQRLQRLAAGPAPAPGDPGPGAAPRQVRAGKLRHGAARGTPGTLRGSAGKLRHGAARGTPGTLRGSAGKLRHGAARGGGAGREGQDQAPPPGRSPAQPRPRFLPGGAAAGAKVPESPTMWNPGAGQPPPPNPVYPPNPTYPPQVPPPNPVYPPPAAPPNPLGGPGQPPYPAGPPPYPPGPPLAPSGPPLGPPLPHPHPGVLPHPGVLPSLSPGLDKKAAKKMKKRMKKAHKRHKRSSSSSSSSSSSD
SIO_010081: LOC115914449
subclass of: SO_0000673
so part of: LOC115914449
location: join(117605..117617,117704..117853,118647..118820,119088..119177,119533..119645,120067..120291,120605..120719,120825..120985,121420..121567,121640..121776,122084..122497,122709..122745,122833..123161,123241..123282)
location: region:117605-123282:1
so has part: feature:117605-117617:1:exon
so has part: feature:117704-117853:1:exon
so has part: feature:118647-118820:1:exon
so has part: feature:119088-119177:1:exon
so has part: feature:119533-119645:1:exon
so has part: feature:120067-120291:1:exon
so has part: feature:120605-120719:1:exon
so has part: feature:120825-120985:1:exon
so has part: feature:121420-121567:1:exon
so has part: feature:121640-121776:1:exon
so has part: feature:122084-122497:1:exon
so has part: feature:122709-122745:1:exon
so has part: feature:122833-123161:1:exon
so has part: feature:123241-123282:1:exon

XP_030822834.1
type: Protein
SIO_000068: ncbiprotein

position:123282:1
position: 123282
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:117605-117617:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:117704-117853:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:118647-118820:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:119088-119177:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:119533-119645:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:120067-120291:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:120605-120719:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:120825-120985:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:121420-121567:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:121640-121776:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:122084-122497:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:122709-122745:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:122833-123161:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:123241-123282:1:exon

PCBP2
type: Gene
subclass of: SO_0000704
RO_0002162: 87175
gene: PCBP2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 123947..137835
location: region:123947-137835:1
so has part: feature:123947-137835:1:exon
subclass of: SO_0000010

115914539
type: Gene
SIO_000068: ncbigene

position:123947:1
position: 123947
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:137835:1
position: 137835
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:123947-137835:1:exon

PCBP2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 87175
gene: PCBP2
product: poly(rC) binding protein 2, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 ESTs, 7 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
transcript id: XM_030967090.1
SIO_010081: PCBP2
subclass of: SO_0000673
so part of: PCBP2
location: join(123947..124053,126158..126275,126625..126648,126766..126798,127042..127158,128344..128475,129039..129167,129571..129645,132161..132202,133135..133207,134532..134584,135095..135264,135979..136614)
location: region:123947-136614:1
so has part: feature:123947-124053:1:exon
so has part: feature:126158-126275:1:exon
so has part: feature:126625-126648:1:exon
so has part: feature:126766-126798:1:exon
so has part: feature:127042-127158:1:exon
so has part: feature:128344-128475:1:exon
so has part: feature:129039-129167:1:exon
so has part: feature:129571-129645:1:exon
so has part: feature:132161-132202:1:exon
so has part: feature:133135-133207:1:exon
so has part: feature:134532-134584:1:exon
so has part: feature:135095-135264:1:exon
so has part: feature:135979-136614:1:exon

position:136614:1
position: 136614
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:123947-124053:1:exon

position:124053:1
position: 124053
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:126158-126275:1:exon

position:126158:1
position: 126158
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:126275:1
position: 126275
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:126625-126648:1:exon

position:126625:1
position: 126625
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:126648:1
position: 126648
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:126766-126798:1:exon

position:126766:1
position: 126766
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:126798:1
position: 126798
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:127042-127158:1:exon

position:127042:1
position: 127042
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:127158:1
position: 127158
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:128344-128475:1:exon

position:128344:1
position: 128344
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:128475:1
position: 128475
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:129039-129167:1:exon

position:129039:1
position: 129039
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:129167:1
position: 129167
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:129571-129645:1:exon

position:129571:1
position: 129571
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:129645:1
position: 129645
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:132161-132202:1:exon

position:132161:1
position: 132161
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:132202:1
position: 132202
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:133135-133207:1:exon

position:133135:1
position: 133135
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:133207:1
position: 133207
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:134532-134584:1:exon

position:134532:1
position: 134532
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:134584:1
position: 134584
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:135095-135264:1:exon

position:135095:1
position: 135095
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:135264:1
position: 135264
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:135979-136614:1:exon

position:135979:1
position: 135979
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

PCBP2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 87175
gene: PCBP2
product: poly(rC) binding protein 2, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 ESTs, 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
transcript id: XM_030967089.1
SIO_010081: PCBP2
subclass of: SO_0000673
so part of: PCBP2
location: join(123949..124053,126158..126275,126625..126648,126766..126798,127042..127158,128344..128475,129039..129167,129571..129645,131001..131087,133135..133207,134532..134584,135095..135264,135979..136614)
location: region:123949-136614:1
so has part: feature:123949-124053:1:exon
so has part: feature:126158-126275:1:exon
so has part: feature:126625-126648:1:exon
so has part: feature:126766-126798:1:exon
so has part: feature:127042-127158:1:exon
so has part: feature:128344-128475:1:exon
so has part: feature:129039-129167:1:exon
so has part: feature:129571-129645:1:exon
so has part: feature:131001-131087:1:exon
so has part: feature:133135-133207:1:exon
so has part: feature:134532-134584:1:exon
so has part: feature:135095-135264:1:exon
so has part: feature:135979-136614:1:exon

position:123949:1
position: 123949
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:123949-124053:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:126158-126275:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:126625-126648:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:126766-126798:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:127042-127158:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:128344-128475:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:129039-129167:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:129571-129645:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:131001-131087:1:exon

position:131001:1
position: 131001
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:131087:1
position: 131087
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:133135-133207:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:134532-134584:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:135095-135264:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:135979-136614:1:exon

PCBP2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 87175
gene: PCBP2
product: poly(rC) binding protein 2, transcript variant X5
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 ESTs, 11 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
transcript id: XM_030967092.1
SIO_010081: PCBP2
subclass of: SO_0000673
so part of: PCBP2
location: join(123956..124053,126158..126275,126625..126648,126766..126798,127042..127158,128344..128475,129039..129167,129571..129645,132161..132202,133135..133207,134532..134584,135095..135264,137279..137835)
location: region:123956-137835:1
so has part: feature:123956-124053:1:exon
so has part: feature:126158-126275:1:exon
so has part: feature:126625-126648:1:exon
so has part: feature:126766-126798:1:exon
so has part: feature:127042-127158:1:exon
so has part: feature:128344-128475:1:exon
so has part: feature:129039-129167:1:exon
so has part: feature:129571-129645:1:exon
so has part: feature:132161-132202:1:exon
so has part: feature:133135-133207:1:exon
so has part: feature:134532-134584:1:exon
so has part: feature:135095-135264:1:exon
so has part: feature:137279-137835:1:exon

position:123956:1
position: 123956
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:123956-124053:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:126158-126275:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:126625-126648:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:126766-126798:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:127042-127158:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:128344-128475:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:129039-129167:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:129571-129645:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:132161-132202:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:133135-133207:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:134532-134584:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:135095-135264:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:137279-137835:1:exon

position:137279:1
position: 137279
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

PCBP2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 87175
gene: PCBP2
product: poly(rC) binding protein 2, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 12 ESTs, 7 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
transcript id: XM_030967091.1
SIO_010081: PCBP2
subclass of: SO_0000673
so part of: PCBP2
location: join(123956..124053,126158..126275,126625..126648,126766..126798,127042..127158,128344..128475,129039..129167,129571..129645,131001..131087,132161..132202,133135..133207,134532..134584,135095..135264,137279..137831)
location: region:123956-137831:1
so has part: feature:123956-124053:1:exon
so has part: feature:126158-126275:1:exon
so has part: feature:126625-126648:1:exon
so has part: feature:126766-126798:1:exon
so has part: feature:127042-127158:1:exon
so has part: feature:128344-128475:1:exon
so has part: feature:129039-129167:1:exon
so has part: feature:129571-129645:1:exon
so has part: feature:131001-131087:1:exon
so has part: feature:132161-132202:1:exon
so has part: feature:133135-133207:1:exon
so has part: feature:134532-134584:1:exon
so has part: feature:135095-135264:1:exon
so has part: feature:137279-137831:1:exon

position:137831:1
position: 137831
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:123956-124053:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:126158-126275:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:126625-126648:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:126766-126798:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:127042-127158:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:128344-128475:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:129039-129167:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:129571-129645:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:131001-131087:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:132161-132202:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:133135-133207:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:134532-134584:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:135095-135264:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:137279-137831:1:exon

PCBP2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 87175
gene: PCBP2
product: poly(rC) binding protein 2, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 8 ESTs, 6 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
transcript id: XM_030967088.1
SIO_010081: PCBP2
subclass of: SO_0000673
so part of: PCBP2
location: join(123956..124053,126158..126275,126625..126648,126766..126798,127042..127158,128344..128475,129039..129167,129571..129645,131001..131087,132161..132202,133135..133207,134532..134584,135095..135264,135979..136612)
location: region:123956-136612:1
so has part: feature:123956-124053:1:exon
so has part: feature:126158-126275:1:exon
so has part: feature:126625-126648:1:exon
so has part: feature:126766-126798:1:exon
so has part: feature:127042-127158:1:exon
so has part: feature:128344-128475:1:exon
so has part: feature:129039-129167:1:exon
so has part: feature:129571-129645:1:exon
so has part: feature:131001-131087:1:exon
so has part: feature:132161-132202:1:exon
so has part: feature:133135-133207:1:exon
so has part: feature:134532-134584:1:exon
so has part: feature:135095-135264:1:exon
so has part: feature:135979-136612:1:exon

position:136612:1
position: 136612
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:123956-124053:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:126158-126275:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:126625-126648:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:126766-126798:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:127042-127158:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:128344-128475:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:129039-129167:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:129571-129645:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:131001-131087:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:132161-132202:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:133135-133207:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:134532-134584:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:135095-135264:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:135979-136612:1:exon

PCBP2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 87175
gene: PCBP2
product: poly(rC) binding protein 2, transcript variant X6
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 7 ESTs, 6 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
transcript id: XM_030967093.1
SIO_010081: PCBP2
subclass of: SO_0000673
so part of: PCBP2
location: join(126190..126275,126625..126648,126766..126798,127042..127158,128344..128475,129039..129167,129571..129645,131001..131087,132161..132202,133135..133207,134532..134584,135095..135264,135979..136613)
location: region:126190-136613:1
so has part: feature:126190-126275:1:exon
so has part: feature:126625-126648:1:exon
so has part: feature:126766-126798:1:exon
so has part: feature:127042-127158:1:exon
so has part: feature:128344-128475:1:exon
so has part: feature:129039-129167:1:exon
so has part: feature:129571-129645:1:exon
so has part: feature:131001-131087:1:exon
so has part: feature:132161-132202:1:exon
so has part: feature:133135-133207:1:exon
so has part: feature:134532-134584:1:exon
so has part: feature:135095-135264:1:exon
so has part: feature:135979-136613:1:exon

position:126190:1
position: 126190
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:136613:1
position: 136613
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:126190-126275:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:126625-126648:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:126766-126798:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:127042-127158:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:128344-128475:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:129039-129167:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:129571-129645:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:131001-131087:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:132161-132202:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:133135-133207:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:134532-134584:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:135095-135264:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:135979-136613:1:exon

PCBP2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 87175
gene: PCBP2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: poly(rC)-binding protein 2 isoform X4
translation: MDTGVIEGGLNVTLTIRLLMHGKEVGSIIGKKGESVKKMREESGARINISEGNCPERIITLAGPTNAIFKAFAMIIDKLEEDISSSMTNSTAASRPPVTLRLVVPASQCGSLIGKGGCKIKEIRESTGAQVQVAGDMLPNSTERAITIAGIPQSIIECVKQICVVMLESPPKGVTIPYRPKPSSSPVIFAGGQDRYSSGSASYPHTAPSMCLNSDLEGPPQEAYTIQGQYAIPQPDLTKLHQLAMQQSHFPMSHGNTGFSGLDASAQTTSHELTIPNDLIGCIIGRQGAKINEIRQMSGAQIKIANPVEGSTDRQVTITGSAASISLAQYLINVRLSSETGGMGSS
SIO_010081: PCBP2
subclass of: SO_0000673
so part of: PCBP2
location: join(126207..126275,126625..126648,126766..126798,127042..127158,128344..128475,129039..129167,129571..129645,131001..131087,132161..132202,133135..133207,134532..134584,135095..135264,137279..137315)
location: region:126207-137315:1
so has part: feature:126207-126275:1:exon
so has part: feature:126625-126648:1:exon
so has part: feature:126766-126798:1:exon
so has part: feature:127042-127158:1:exon
so has part: feature:128344-128475:1:exon
so has part: feature:129039-129167:1:exon
so has part: feature:129571-129645:1:exon
so has part: feature:131001-131087:1:exon
so has part: feature:132161-132202:1:exon
so has part: feature:133135-133207:1:exon
so has part: feature:134532-134584:1:exon
so has part: feature:135095-135264:1:exon
so has part: feature:137279-137315:1:exon

XP_030822951.1
type: Protein
SIO_000068: ncbiprotein

position:126207:1
position: 126207
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:137315:1
position: 137315
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:126207-126275:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:126625-126648:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:126766-126798:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:127042-127158:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:128344-128475:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:129039-129167:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:129571-129645:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:131001-131087:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:132161-132202:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:133135-133207:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:134532-134584:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:135095-135264:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:137279-137315:1:exon

PCBP2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 87175
gene: PCBP2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: poly(rC)-binding protein 2 isoform X5
translation: MDTGVIEGGLNVTLTIRLLMHGKEVGSIIGKKGESVKKMREESGARINISEGNCPERIITLAGPTNAIFKAFAMIIDKLEEDISSSMTNSTAASRPPVTLRLVVPASQCGSLIGKGGCKIKEIRESTGAQVQVAGDMLPNSTERAITIAGIPQSIIECVKQICVVMLESPPKGVTIPYRPKPSSSPVIFAGGQAYTIQGQYAIPQPDLTKLHQLAMQQSHFPMSHGNTGFSGLDASAQTTSHELTIPNDLIGCIIGRQGAKINEIRQMSGAQIKIANPVEGSTDRQVTITGSAASISLAQYLINVRLSSETGGMGSS
SIO_010081: PCBP2
subclass of: SO_0000673
so part of: PCBP2
location: join(126207..126275,126625..126648,126766..126798,127042..127158,128344..128475,129039..129167,129571..129645,132161..132202,133135..133207,134532..134584,135095..135264,137279..137315)
location: region:126207-137315:1
so has part: feature:126207-126275:1:exon
so has part: feature:126625-126648:1:exon
so has part: feature:126766-126798:1:exon
so has part: feature:127042-127158:1:exon
so has part: feature:128344-128475:1:exon
so has part: feature:129039-129167:1:exon
so has part: feature:129571-129645:1:exon
so has part: feature:132161-132202:1:exon
so has part: feature:133135-133207:1:exon
so has part: feature:134532-134584:1:exon
so has part: feature:135095-135264:1:exon
so has part: feature:137279-137315:1:exon

XP_030822952.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:126207-126275:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:126625-126648:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:126766-126798:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:127042-127158:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:128344-128475:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:129039-129167:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:129571-129645:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:132161-132202:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:133135-133207:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:134532-134584:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:135095-135264:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:137279-137315:1:exon

PCBP2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 87175
gene: PCBP2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: poly(rC)-binding protein 2 isoform X1
translation: MDTGVIEGGLNVTLTIRLLMHGKEVGSIIGKKGESVKKMREESGARINISEGNCPERIITLAGPTNAIFKAFAMIIDKLEEDISSSMTNSTAASRPPVTLRLVVPASQCGSLIGKGGCKIKEIRESTGAQVQVAGDMLPNSTERAITIAGIPQSIIECVKQICVVMLESPPKGVTIPYRPKPSSSPVIFAGGQDRYSSGSASYPHTAPSMCLNSDLEGPPQEAYTIQGQYAIPQPDLTKLHQLAMQQSHFPMSHGNTGFSGLDASAQTTSHELTIPNDLIGCIIGRQGAKINEIRQMSGAQIKIANPVEGSTDRQVTITGSAASISLAQYLINVSLESAKPSSQAASVTIPDHLSINLSQPSTPSSSSSSTTTPSLATAGASDAPSSLPNPLPTAPCVSSLLGMKPVPLLALNVVSAAKGAAAPAVPCVTNKLKAEKQRFSPY
SIO_010081: PCBP2
subclass of: SO_0000673
so part of: PCBP2
location: join(126207..126275,126625..126648,126766..126798,127042..127158,128344..128475,129039..129167,129571..129645,131001..131087,132161..132202,133135..133207,134532..134584,135095..135264,135979..136306)
location: region:126207-136306:1
so has part: feature:126207-126275:1:exon
so has part: feature:126625-126648:1:exon
so has part: feature:126766-126798:1:exon
so has part: feature:127042-127158:1:exon
so has part: feature:128344-128475:1:exon
so has part: feature:129039-129167:1:exon
so has part: feature:129571-129645:1:exon
so has part: feature:131001-131087:1:exon
so has part: feature:132161-132202:1:exon
so has part: feature:133135-133207:1:exon
so has part: feature:134532-134584:1:exon
so has part: feature:135095-135264:1:exon
so has part: feature:135979-136306:1:exon

XP_030822948.1
type: Protein
SIO_000068: ncbiprotein

position:136306:1
position: 136306
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:126207-126275:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:126625-126648:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:126766-126798:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:127042-127158:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:128344-128475:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:129039-129167:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:129571-129645:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:131001-131087:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:132161-132202:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:133135-133207:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:134532-134584:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:135095-135264:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:135979-136306:1:exon

PCBP2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 87175
gene: PCBP2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: poly(rC)-binding protein 2 isoform X1
translation: MDTGVIEGGLNVTLTIRLLMHGKEVGSIIGKKGESVKKMREESGARINISEGNCPERIITLAGPTNAIFKAFAMIIDKLEEDISSSMTNSTAASRPPVTLRLVVPASQCGSLIGKGGCKIKEIRESTGAQVQVAGDMLPNSTERAITIAGIPQSIIECVKQICVVMLESPPKGVTIPYRPKPSSSPVIFAGGQDRYSSGSASYPHTAPSMCLNSDLEGPPQEAYTIQGQYAIPQPDLTKLHQLAMQQSHFPMSHGNTGFSGLDASAQTTSHELTIPNDLIGCIIGRQGAKINEIRQMSGAQIKIANPVEGSTDRQVTITGSAASISLAQYLINVSLESAKPSSQAASVTIPDHLSINLSQPSTPSSSSSSTTTPSLATAGASDAPSSLPNPLPTAPCVSSLLGMKPVPLLALNVVSAAKGAAAPAVPCVTNKLKAEKQRFSPY
SIO_010081: PCBP2
subclass of: SO_0000673
so part of: PCBP2
location: join(126207..126275,126625..126648,126766..126798,127042..127158,128344..128475,129039..129167,129571..129645,131001..131087,132161..132202,133135..133207,134532..134584,135095..135264,135979..136306)
location: region:126207-136306:1
so has part: feature:126207-126275:1:exon
so has part: feature:126625-126648:1:exon
so has part: feature:126766-126798:1:exon
so has part: feature:127042-127158:1:exon
so has part: feature:128344-128475:1:exon
so has part: feature:129039-129167:1:exon
so has part: feature:129571-129645:1:exon
so has part: feature:131001-131087:1:exon
so has part: feature:132161-132202:1:exon
so has part: feature:133135-133207:1:exon
so has part: feature:134532-134584:1:exon
so has part: feature:135095-135264:1:exon
so has part: feature:135979-136306:1:exon

XP_030822953.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:126207-126275:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:126625-126648:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:126766-126798:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:127042-127158:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:128344-128475:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:129039-129167:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:129571-129645:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:131001-131087:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:132161-132202:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:133135-133207:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:134532-134584:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:135095-135264:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:135979-136306:1:exon

PCBP2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 87175
gene: PCBP2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: poly(rC)-binding protein 2 isoform X2
translation: MDTGVIEGGLNVTLTIRLLMHGKEVGSIIGKKGESVKKMREESGARINISEGNCPERIITLAGPTNAIFKAFAMIIDKLEEDISSSMTNSTAASRPPVTLRLVVPASQCGSLIGKGGCKIKEIRESTGAQVQVAGDMLPNSTERAITIAGIPQSIIECVKQICVVMLESPPKGVTIPYRPKPSSSPVIFAGGQDRYSSGSASYPHTAPSMCLNSDLEGPPQELTKLHQLAMQQSHFPMSHGNTGFSGLDASAQTTSHELTIPNDLIGCIIGRQGAKINEIRQMSGAQIKIANPVEGSTDRQVTITGSAASISLAQYLINVSLESAKPSSQAASVTIPDHLSINLSQPSTPSSSSSSTTTPSLATAGASDAPSSLPNPLPTAPCVSSLLGMKPVPLLALNVVSAAKGAAAPAVPCVTNKLKAEKQRFSPY
SIO_010081: PCBP2
subclass of: SO_0000673
so part of: PCBP2
location: join(126207..126275,126625..126648,126766..126798,127042..127158,128344..128475,129039..129167,129571..129645,131001..131087,133135..133207,134532..134584,135095..135264,135979..136306)
location: region:126207-136306:1
so has part: feature:126207-126275:1:exon
so has part: feature:126625-126648:1:exon
so has part: feature:126766-126798:1:exon
so has part: feature:127042-127158:1:exon
so has part: feature:128344-128475:1:exon
so has part: feature:129039-129167:1:exon
so has part: feature:129571-129645:1:exon
so has part: feature:131001-131087:1:exon
so has part: feature:133135-133207:1:exon
so has part: feature:134532-134584:1:exon
so has part: feature:135095-135264:1:exon
so has part: feature:135979-136306:1:exon

XP_030822949.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:126207-126275:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:126625-126648:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:126766-126798:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:127042-127158:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:128344-128475:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:129039-129167:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:129571-129645:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:131001-131087:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:133135-133207:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:134532-134584:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:135095-135264:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:135979-136306:1:exon

PCBP2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 87175
gene: PCBP2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: poly(rC)-binding protein 2 isoform X3
translation: MDTGVIEGGLNVTLTIRLLMHGKEVGSIIGKKGESVKKMREESGARINISEGNCPERIITLAGPTNAIFKAFAMIIDKLEEDISSSMTNSTAASRPPVTLRLVVPASQCGSLIGKGGCKIKEIRESTGAQVQVAGDMLPNSTERAITIAGIPQSIIECVKQICVVMLESPPKGVTIPYRPKPSSSPVIFAGGQAYTIQGQYAIPQPDLTKLHQLAMQQSHFPMSHGNTGFSGLDASAQTTSHELTIPNDLIGCIIGRQGAKINEIRQMSGAQIKIANPVEGSTDRQVTITGSAASISLAQYLINVSLESAKPSSQAASVTIPDHLSINLSQPSTPSSSSSSTTTPSLATAGASDAPSSLPNPLPTAPCVSSLLGMKPVPLLALNVVSAAKGAAAPAVPCVTNKLKAEKQRFSPY
SIO_010081: PCBP2
subclass of: SO_0000673
so part of: PCBP2
location: join(126207..126275,126625..126648,126766..126798,127042..127158,128344..128475,129039..129167,129571..129645,132161..132202,133135..133207,134532..134584,135095..135264,135979..136306)
location: region:126207-136306:1
so has part: feature:126207-126275:1:exon
so has part: feature:126625-126648:1:exon
so has part: feature:126766-126798:1:exon
so has part: feature:127042-127158:1:exon
so has part: feature:128344-128475:1:exon
so has part: feature:129039-129167:1:exon
so has part: feature:129571-129645:1:exon
so has part: feature:132161-132202:1:exon
so has part: feature:133135-133207:1:exon
so has part: feature:134532-134584:1:exon
so has part: feature:135095-135264:1:exon
so has part: feature:135979-136306:1:exon

XP_030822950.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:126207-126275:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:126625-126648:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:126766-126798:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:127042-127158:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:128344-128475:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:129039-129167:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:129571-129645:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:132161-132202:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:133135-133207:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:134532-134584:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:135095-135264:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:135979-136306:1:exon

MAP3K12
type: Gene
subclass of: SO_0000704
RO_0002162: 87175
gene: MAP3K12
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(138336..145301)
location: region:138336-145301:-1
so has part: feature:138336-145301:-1:exon
subclass of: SO_0000010

115914538
type: Gene
SIO_000068: ncbigene

position:138336:-1
position: 138336
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:145301:-1
position: 145301
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:138336-145301:-1:exon

MAP3K12
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 87175
gene: MAP3K12
product: mitogen-activated protein kinase kinase kinase 12
exception: unclassified transcription discrepancy
note: The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: inserted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 23 Proteins, and 93% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XM_030967087.1
SIO_010081: MAP3K12
subclass of: SO_0000673
so part of: MAP3K12
location: complement(join(138336..138497,138851..139103,139188..139258,139449..139886,140364..140501,140753..140869,141033..141142,141472..141580,141869..142027,142242..142400,143243..143434,144377..144560,144921..145301))
location: region:138336-145301:-1
so has part: feature:144921-145301:-1:exon
so has part: feature:144377-144560:-1:exon
so has part: feature:143243-143434:-1:exon
so has part: feature:142242-142400:-1:exon
so has part: feature:141869-142027:-1:exon
so has part: feature:141472-141580:-1:exon
so has part: feature:141033-141142:-1:exon
so has part: feature:140753-140869:-1:exon
so has part: feature:140364-140501:-1:exon
so has part: feature:139449-139886:-1:exon
so has part: feature:139188-139258:-1:exon
so has part: feature:138851-139103:-1:exon
so has part: feature:138336-138497:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:144921-145301:-1:exon

position:144921:-1
position: 144921
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:144377-144560:-1:exon

position:144377:-1
position: 144377
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:144560:-1
position: 144560
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:143243-143434:-1:exon

position:143243:-1
position: 143243
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:143434:-1
position: 143434
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:142242-142400:-1:exon

position:142242:-1
position: 142242
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:142400:-1
position: 142400
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:141869-142027:-1:exon

position:141869:-1
position: 141869
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:142027:-1
position: 142027
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:141472-141580:-1:exon

position:141472:-1
position: 141472
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:141580:-1
position: 141580
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:141033-141142:-1:exon

position:141033:-1
position: 141033
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:141142:-1
position: 141142
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:140753-140869:-1:exon

position:140753:-1
position: 140753
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:140869:-1
position: 140869
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:140364-140501:-1:exon

position:140364:-1
position: 140364
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:140501:-1
position: 140501
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:139449-139886:-1:exon

position:139449:-1
position: 139449
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:139886:-1
position: 139886
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:139188-139258:-1:exon

position:139188:-1
position: 139188
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:139258:-1
position: 139258
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:138851-139103:-1:exon

position:138851:-1
position: 138851
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:139103:-1
position: 139103
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:138336-138497:-1:exon

position:138497:-1
position: 138497
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

MAP3K12
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 87175
gene: MAP3K12
exception: unclassified translation discrepancy
note: The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: inserted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: LOW QUALITY PROTEIN: mitogen-activated protein kinase kinase kinase 12
translation: MACLHETRTPSPSLALPSDGTPEQELTPTQCVLRDVLPAPSAPPEAWPRRGGSRPPELGPEAAGPLAADAAHLRCQAGGGFLEGLFGCLKPVWTMIGKAYAAEHKHPPEDPWEVPFEEILDLQWVGSGAQGAVFLGRFHGEEVAVKKVRDLKETDIKHLRKLKHPNIITFKGVCTQAPCYCIIMEFCAQGQLYEVLRAGRKVTPSLLVDWSMGIAGGMNYLHLHKIIHRDLKSPNMLITYDDVVKISDFGTSKELIDKSTKMSFAGTVAWMAPEVIRNEPVSEKVDIWSFGVVLWELLTGEIPYKDVDSSAIIWGVGSNSLHLPVPSSCPDGFKVLLRQCWNSKPRNRPSFRQILLHLDIASADVLSTPQETYFKSQAEWREEVKLHFEKIKSEGTCLHRLEEELINRRREELRHALDIREHYERKLERANNLYMELSALMLQLELKEKELLRREQALEKRYPGLFKPRVPRGLLHGNAVETLIKKRNVPQKLSPHGKRPDILKPEVLLPKLDAAMAQVALPGGPKGPPSPGRGRRAKGRHRKAGPRGGCGEPGPEAGTPRGPPXTAASPDILGGTLEAAGAPPAAEPDAGPEGAAGSQGSPPAQPPTPGEPERESGAGRGGKGGAGQHLTPAALLYRAAVTRGQKRGVSSEEEEGEVDSEVELPLRQRWPPGMSKRQSLSTFSSENFSDGDGDEGHTSEPSHSATPDVGSTNTDERPDDRSEDLLSQGSEIPLDAAPPEGPGRRHGGLSPTKVSEDSDCDSAELDHSGSGEGPPRPTAPPGL
SIO_010081: MAP3K12
subclass of: SO_0000673
so part of: MAP3K12
location: complement(join(138405..138497,138851..139103,139188..139258,139449..139886,140364..140501,140753..140869,141033..141142,141472..141580,141869..142027,142242..142400,143243..143434,144377..144560,144921..145248))
location: region:138405-145248:-1
so has part: feature:144921-145248:-1:exon
so has part: feature:144377-144560:-1:exon
so has part: feature:143243-143434:-1:exon
so has part: feature:142242-142400:-1:exon
so has part: feature:141869-142027:-1:exon
so has part: feature:141472-141580:-1:exon
so has part: feature:141033-141142:-1:exon
so has part: feature:140753-140869:-1:exon
so has part: feature:140364-140501:-1:exon
so has part: feature:139449-139886:-1:exon
so has part: feature:139188-139258:-1:exon
so has part: feature:138851-139103:-1:exon
so has part: feature:138405-138497:-1:exon

XP_030822947.1
type: Protein
SIO_000068: ncbiprotein

position:138405:-1
position: 138405
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:145248:-1
position: 145248
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:144921-145248:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:144377-144560:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:143243-143434:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:142242-142400:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:141869-142027:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:141472-141580:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:141033-141142:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:140753-140869:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:140364-140501:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:139449-139886:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:139188-139258:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:138851-139103:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:138405-138497:-1:exon

TARBP2
type: Gene
subclass of: SO_0000704
RO_0002162: 87175
gene: TARBP2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 147585..151626
location: region:147585-151626:1
so has part: feature:147585-151626:1:exon
subclass of: SO_0000010

115914616
type: Gene
SIO_000068: ncbigene

position:147585:1
position: 147585
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:151626:1
position: 151626
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:147585-151626:1:exon

TARBP2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 87175
gene: TARBP2
product: TARBP2 subunit of RISC loading complex, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 ESTs, 8 Proteins, and 98% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_030967233.1
SIO_010081: TARBP2
subclass of: SO_0000673
so part of: TARBP2
location: join(147585..147680,148440..148609,148792..148891,149134..149217,149310..149382,150437..150554,150630..150757,150995..151181,151280..151626)
location: region:147585-151626:1
so has part: feature:147585-147680:1:exon
so has part: feature:148440-148609:1:exon
so has part: feature:148792-148891:1:exon
so has part: feature:149134-149217:1:exon
so has part: feature:149310-149382:1:exon
so has part: feature:150437-150554:1:exon
so has part: feature:150630-150757:1:exon
so has part: feature:150995-151181:1:exon
so has part: feature:151280-151626:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:147585-147680:1:exon

position:147680:1
position: 147680
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:148440-148609:1:exon

position:148440:1
position: 148440
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:148609:1
position: 148609
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:148792-148891:1:exon

position:148792:1
position: 148792
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:148891:1
position: 148891
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:149134-149217:1:exon

position:149134:1
position: 149134
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:149217:1
position: 149217
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:149310-149382:1:exon

position:149310:1
position: 149310
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:149382:1
position: 149382
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:150437-150554:1:exon

position:150437:1
position: 150437
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:150554:1
position: 150554
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:150630-150757:1:exon

position:150630:1
position: 150630
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:150757:1
position: 150757
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:150995-151181:1:exon

position:150995:1
position: 150995
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:151181:1
position: 151181
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:151280-151626:1:exon

position:151280:1
position: 151280
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

TARBP2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 87175
gene: TARBP2
product: TARBP2 subunit of RISC loading complex, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 ESTs, 9 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_030967234.1
SIO_010081: TARBP2
subclass of: SO_0000673
so part of: TARBP2
location: join(147585..147680,148440..148609,148792..148891,149310..149382,150437..150554,150630..150757,150995..151181,151280..151625)
location: region:147585-151625:1
so has part: feature:147585-147680:1:exon
so has part: feature:148440-148609:1:exon
so has part: feature:148792-148891:1:exon
so has part: feature:149310-149382:1:exon
so has part: feature:150437-150554:1:exon
so has part: feature:150630-150757:1:exon
so has part: feature:150995-151181:1:exon
so has part: feature:151280-151625:1:exon

position:151625:1
position: 151625
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:147585-147680:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:148440-148609:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:148792-148891:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:149310-149382:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:150437-150554:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:150630-150757:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:150995-151181:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:151280-151625:1:exon

TARBP2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 87175
gene: TARBP2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: RISC-loading complex subunit TARBP2 isoform X1
translation: MVAASPGKTPISLLQEYGTRLGRTPGYDLLKAEGQAHQPNFTFRVTLGDISCTGQGPSKKAAKHKAAEVALRLLRGGGAMLEPLEHSSPFPPEPPAEPGPAAPPPAPAAPPPSPRGPPLEMKTPVSPPQAECNPVGALQELVVQKGWRLPEYTVTQESGPAHRKEFTMTCRVERFVEIGSGTSKKLAKRNAAAKMLVRIHNVPMEPRDGSEAEGEEDQFNMTCPRLEGLRGRAPGCTWDSLRNSAGEKLGQLRSRGGNPAPGALRPAAGAPEEQSFAISYLDIDALSLSGLHQCLVELSTQPTTVCHGTAPSRDGARAQAARNALQYLRIMAGGK
SIO_010081: TARBP2
subclass of: SO_0000673
so part of: TARBP2
location: join(148450..148609,148792..148891,149134..149217,149310..149382,150437..150554,150630..150757,150995..151181,151280..151437)
location: region:148450-151437:1
so has part: feature:148450-148609:1:exon
so has part: feature:148792-148891:1:exon
so has part: feature:149134-149217:1:exon
so has part: feature:149310-149382:1:exon
so has part: feature:150437-150554:1:exon
so has part: feature:150630-150757:1:exon
so has part: feature:150995-151181:1:exon
so has part: feature:151280-151437:1:exon

XP_030823093.1
type: Protein
SIO_000068: ncbiprotein

position:148450:1
position: 148450
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:151437:1
position: 151437
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:148450-148609:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:148792-148891:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:149134-149217:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:149310-149382:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:150437-150554:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:150630-150757:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:150995-151181:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:151280-151437:1:exon

TARBP2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 87175
gene: TARBP2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: RISC-loading complex subunit TARBP2 isoform X2
translation: MVAASPGKTPISLLQEYGTRLGRTPGYDLLKAEGQAHQPNFTFRVTLGDISCTGQGPSKKAAKHKAAEVALRLLRGGGAMLEPLEHRGPPLEMKTPVSPPQAECNPVGALQELVVQKGWRLPEYTVTQESGPAHRKEFTMTCRVERFVEIGSGTSKKLAKRNAAAKMLVRIHNVPMEPRDGSEAEGEEDQFNMTCPRLEGLRGRAPGCTWDSLRNSAGEKLGQLRSRGGNPAPGALRPAAGAPEEQSFAISYLDIDALSLSGLHQCLVELSTQPTTVCHGTAPSRDGARAQAARNALQYLRIMAGGK
SIO_010081: TARBP2
subclass of: SO_0000673
so part of: TARBP2
location: join(148450..148609,148792..148891,149310..149382,150437..150554,150630..150757,150995..151181,151280..151437)
location: region:148450-151437:1
so has part: feature:148450-148609:1:exon
so has part: feature:148792-148891:1:exon
so has part: feature:149310-149382:1:exon
so has part: feature:150437-150554:1:exon
so has part: feature:150630-150757:1:exon
so has part: feature:150995-151181:1:exon
so has part: feature:151280-151437:1:exon

XP_030823094.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:148450-148609:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:148792-148891:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:149310-149382:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:150437-150554:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:150630-150757:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:150995-151181:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:151280-151437:1:exon

LOC115914656
type: Gene
subclass of: SO_0000704
RO_0002162: 87175
gene: LOC115914656
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(157265..202284)
location: region:157265-202284:-1
so has part: feature:157265-202284:-1:exon
subclass of: SO_0000010

115914656
type: Gene
SIO_000068: ncbigene

position:157265:-1
position: 157265
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:202284:-1
position: 202284
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:157265-202284:-1:exon

LOC115914656
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 87175
gene: LOC115914656
product: cyclic AMP-dependent transcription factor ATF-7-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins, and 98% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_030967288.1
SIO_010081: LOC115914656
subclass of: SO_0000673
so part of: LOC115914656
location: complement(join(157265..157869,160786..160894,161339..161520,163600..163747,164195..164332,164517..164616,165493..165656,166089..166229,170594..170712,173522..173618,191900..191958,202188..202284))
location: region:157265-202284:-1
so has part: feature:202188-202284:-1:exon
so has part: feature:191900-191958:-1:exon
so has part: feature:173522-173618:-1:exon
so has part: feature:170594-170712:-1:exon
so has part: feature:166089-166229:-1:exon
so has part: feature:165493-165656:-1:exon
so has part: feature:164517-164616:-1:exon
so has part: feature:164195-164332:-1:exon
so has part: feature:163600-163747:-1:exon
so has part: feature:161339-161520:-1:exon
so has part: feature:160786-160894:-1:exon
so has part: feature:157265-157869:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:202188-202284:-1:exon

position:202188:-1
position: 202188
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:191900-191958:-1:exon

position:191900:-1
position: 191900
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:191958:-1
position: 191958
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:173522-173618:-1:exon

position:173522:-1
position: 173522
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:173618:-1
position: 173618
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:170594-170712:-1:exon

position:170594:-1
position: 170594
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:170712:-1
position: 170712
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:166089-166229:-1:exon

position:166089:-1
position: 166089
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:166229:-1
position: 166229
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:165493-165656:-1:exon

position:165493:-1
position: 165493
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:165656:-1
position: 165656
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:164517-164616:-1:exon

position:164517:-1
position: 164517
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:164616:-1
position: 164616
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:164195-164332:-1:exon

position:164195:-1
position: 164195
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:164332:-1
position: 164332
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:163600-163747:-1:exon

position:163600:-1
position: 163600
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:163747:-1
position: 163747
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:161339-161520:-1:exon

position:161339:-1
position: 161339
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:161520:-1
position: 161520
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:160786-160894:-1:exon

position:160786:-1
position: 160786
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:160894:-1
position: 160894
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:157265-157869:-1:exon

position:157869:-1
position: 157869
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC115914656
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 87175
gene: LOC115914656
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: cyclic AMP-dependent transcription factor ATF-7-like
translation: MGDDRPFVCSAPGCGQRFTNEDHLAVHKHKHELTLKFGPARTDSVIIADQTPTPTRFLKNCEEVGLFNELASSFEHEFKKAAEDDEKKGSGALDMSLPSPPEVRIKEEEPLEVDSSPPESPAARPRSPQRRHRDKDGAPKAVILSAPTPTIVRPGSLPLHLGYDALHAAATLPSPTSVITQAPPAHRQLGSPSSSLPLVVQLANGQTMPVLPGPPVQMPSVISLARPVAMVPNIPGIPGPPSSSSSSSSSSSSGSLSPSALPVHSEAKLRLKASLAASSSLNGSSLAVGSASTMVTARPEQSQGGQHPDTPSPAQPQVSHAQPSAAAGGAADEDPDERRQRFLERNRAAASRCRQKRKLWVSSLEKKAEELTSQNIQLSNEVTLLRNEVAQLKQLLLAHKDCPVTALQKKTQGYLESPKESSEPSGSPAPVIQHSSASAAPNGLRAAAEAVASSVLAHMAGQRTELAVPAASPVIMAPQSHSAGR
SIO_010081: LOC115914656
subclass of: SO_0000673
so part of: LOC115914656
location: complement(join(157658..157869,160786..160894,161339..161520,163600..163747,164195..164332,164517..164616,165493..165656,166089..166229,170594..170712,173522..173618,191900..191947))
location: region:157658-191947:-1
so has part: feature:191900-191947:-1:exon
so has part: feature:173522-173618:-1:exon
so has part: feature:170594-170712:-1:exon
so has part: feature:166089-166229:-1:exon
so has part: feature:165493-165656:-1:exon
so has part: feature:164517-164616:-1:exon
so has part: feature:164195-164332:-1:exon
so has part: feature:163600-163747:-1:exon
so has part: feature:161339-161520:-1:exon
so has part: feature:160786-160894:-1:exon
so has part: feature:157658-157869:-1:exon

XP_030823148.1
type: Protein
SIO_000068: ncbiprotein

position:157658:-1
position: 157658
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:191947:-1
position: 191947
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:191900-191947:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:173522-173618:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:170594-170712:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:166089-166229:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:165493-165656:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:164517-164616:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:164195-164332:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:163600-163747:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:161339-161520:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:160786-160894:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:157658-157869:-1:exon

HOXC12
type: Gene
subclass of: SO_0000704
RO_0002162: 87175
gene: HOXC12
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 270198..276245
location: region:270198-276245:1
so has part: feature:270198-276245:1:exon
subclass of: SO_0000010

115914642
type: Gene
SIO_000068: ncbigene

position:270198:1
position: 270198
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:276245:1
position: 276245
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:270198-276245:1:exon

HOXC12
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 87175
gene: HOXC12
product: homeobox C12
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 16 Proteins
transcript id: XM_030967268.1
SIO_010081: HOXC12
subclass of: SO_0000673
so part of: HOXC12
location: join(270198..270768,272816..272833,276010..276245)
location: region:270198-276245:1
so has part: feature:270198-270768:1:exon
so has part: feature:272816-272833:1:exon
so has part: feature:276010-276245:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:270198-270768:1:exon

position:270768:1
position: 270768
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:272816-272833:1:exon

position:272816:1
position: 272816
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:272833:1
position: 272833
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:276010-276245:1:exon

position:276010:1
position: 276010
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

HOXC12
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 87175
gene: HOXC12
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: homeobox protein Hox-C12
translation: MGEHNLLNPGFVGPLLNIHTGDAFYFPNFRASGGQIPALPSLPYPRRDNFASLPAWAPSEPCGPYPQPYLGFGRACELARPDEGKCCYRDGDAKGREGRDAALLPLEPPAAGSGPSPHVGTNPGALGTNPGALGTLGGGFGKFEFGGAEGGAQEAQSCPGLEADSGSALLAEAAKGDAPGLLSPLGAGGAALSTGGAPWYPLHTRSRKKRKPYSKLQLAELEGEFLVNEFITRQRRRELSDRLNLSDQQVKIWFQNRRMKKKRLLLREQALSFF
SIO_010081: HOXC12
subclass of: SO_0000673
so part of: HOXC12
location: join(270198..270768,272816..272833,276010..276245)
location: region:270198-276245:1
so has part: feature:270198-270768:1:exon
so has part: feature:272816-272833:1:exon
so has part: feature:276010-276245:1:exon

XP_030823128.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:270198-270768:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:272816-272833:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:276010-276245:1:exon

HOXC11
type: Gene
subclass of: SO_0000704
RO_0002162: 87175
gene: HOXC11
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 293418..299104
location: region:293418-299104:1
so has part: feature:293418-299104:1:exon
subclass of: SO_0000010

115914647
type: Gene
SIO_000068: ncbigene

position:293418:1
position: 293418
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:299104:1
position: 299104
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:293418-299104:1:exon

HOXC11
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 87175
gene: HOXC11
product: homeobox C11
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 17 Proteins
transcript id: XM_030967277.1
SIO_010081: HOXC11
subclass of: SO_0000673
so part of: HOXC11
location: join(293418..294054,298872..299104)
location: region:293418-299104:1
so has part: feature:293418-294054:1:exon
so has part: feature:298872-299104:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:293418-294054:1:exon

position:294054:1
position: 294054
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:298872-299104:1:exon

position:298872:1
position: 298872
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

HOXC11
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 87175
gene: HOXC11
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: homeobox protein Hox-C11
translation: MFNSVNLGNFCPSQARKERAGGGGGDFGERGGNLYVPGCAYYVPELPAVPPFAPGRQLPYPYPGVPREVPYALEPAGKWPPPRGNYAAWSSAEELLHRECLPAAEVLMKNENYHHHHHHHHHHQQHQGAAAPAFYPAVSKGSVLPQGFDRFFENSALCAPESAAESADGARSAEGNAQEEEEEEEEEENANPGSASAASAAGAKESSKSGAQSAPRTRKKRCPYSKFQIRELEREFFFNVYISKEKRLQLSRLLNLSDRQVKIWFQNRRMKEKKLSRDRLQYFSGNPLL
SIO_010081: HOXC11
subclass of: SO_0000673
so part of: HOXC11
location: join(293418..294054,298872..299104)
location: region:293418-299104:1
so has part: feature:293418-294054:1:exon
so has part: feature:298872-299104:1:exon

XP_030823137.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:293418-294054:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:298872-299104:1:exon

LOC115914450
type: Gene
subclass of: SO_0000704
RO_0002162: 87175
gene: LOC115914450
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(313348..313911)
location: region:313348-313911:-1
so has part: feature:313348-313911:-1:exon
subclass of: SO_0000010

115914450
type: Gene
SIO_000068: ncbigene

position:313348:-1
position: 313348
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:313911:-1
position: 313911
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:313348-313911:-1:exon

LOC115914450
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 87175
gene: LOC115914450
product: acid shock protein-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein
transcript id: XM_030966975.1
SIO_010081: LOC115914450
subclass of: SO_0000673
so part of: LOC115914450
location: complement(313348..313911)
location: region:313348-313911:-1
so has part: feature:313348-313911:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:313348-313911:-1:exon

LOC115914450
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 87175
gene: LOC115914450
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: uncharacterized protein LOC115914450
translation: MRIENGLGDSDGADVTGVKVAPAAAAPWSNSDICPRPAGTCAAAQRPKPAKKPRKKPAKYRQKTRQKTGKNPAKNRQKTGKIPAENPAENRQKNRQKNPAKNRQNTGKKPGRKPAKKPAKKTRKKTGKIPVKYPAENRQKPAKTPQKTGKIPAKNPAENRQKNPAKNRQNTGKIPGKKTGKKPVKYR
SIO_010081: LOC115914450
subclass of: SO_0000673
so part of: LOC115914450
location: complement(313348..313911)
location: region:313348-313911:-1
so has part: feature:313348-313911:-1:exon

XP_030822835.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:313348-313911:-1:exon

HOXC10
type: Gene
subclass of: SO_0000704
RO_0002162: 87175
gene: HOXC10
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 314245..320743
location: region:314245-320743:1
so has part: feature:314245-320743:1:exon
subclass of: SO_0000010

115914640
type: Gene
SIO_000068: ncbigene

position:314245:1
position: 314245
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:320743:1
position: 320743
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:314245-320743:1:exon

HOXC10
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 87175
gene: HOXC10
product: homeobox C10
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 21 Proteins
transcript id: XM_030967265.1
SIO_010081: HOXC10
subclass of: SO_0000673
so part of: HOXC10
location: join(314245..314869,320466..320743)
location: region:314245-320743:1
so has part: feature:314245-314869:1:exon
so has part: feature:320466-320743:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:314245-314869:1:exon

position:314869:1
position: 314869
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:320466-320743:1:exon

position:320466:1
position: 320466
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

HOXC10
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 87175
gene: HOXC10
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: homeobox protein Hox-C10
translation: MSCPGSAAPSAFLMEPLARPEPFAPGPGLFAQPGEFPALRSCQKRDEASLGSFPSYLAQLDAWAEPKGAFRPEPLPSCAFPGSVKEESGCCLFAEKAPKPAQNAAFSAEPCLGQPEATAAAFYRYPELEKSPESAEFQPGFRGERLEAAPAAAAERGSPQFAPSFPQNAAAEGEIKSEKAKASAGEAEKELGKSTDGGSSENSDSEAKEEAKAEGAGGTWLTARSGRKKRCPYTKHQTLELEKEFLFNMYLTRERRLEISRSIALTDRQVKIWFQNRRMKLKKMNRESRVRQLSAGFSFS
SIO_010081: HOXC10
subclass of: SO_0000673
so part of: HOXC10
location: join(314245..314869,320466..320743)
location: region:314245-320743:1
so has part: feature:314245-314869:1:exon
so has part: feature:320466-320743:1:exon

XP_030823125.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:314245-314869:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:320466-320743:1:exon

HOXC9
type: Gene
subclass of: SO_0000704
RO_0002162: 87175
gene: HOXC9
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 333151..335821
location: region:333151-335821:1
so has part: feature:333151-335821:1:exon
subclass of: SO_0000010

115914641
type: Gene
SIO_000068: ncbigene

position:333151:1
position: 333151
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:335821:1
position: 335821
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:333151-335821:1:exon

HOXC9
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 87175
gene: HOXC9
product: homeobox C9
exception: unclassified transcription discrepancy
note: The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: deleted 2 bases in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 16 Proteins
transcript id: XM_030967267.1
SIO_010081: HOXC9
subclass of: SO_0000673
so part of: HOXC9
location: join(333151..333696,335577..335821)
location: region:333151-335821:1
so has part: feature:333151-333696:1:exon
so has part: feature:335577-335821:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:333151-333696:1:exon

position:333696:1
position: 333696
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:335577-335821:1:exon

position:335577:1
position: 335577
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

HOXC9
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 87175
gene: HOXC9
exception: unclassified translation discrepancy
note: The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: deleted 2 bases in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: LOW QUALITY PROTEIN: homeobox protein Hox-C9
translation: MSASGPISNYYVDSLIGPDNEELLAPRFGGPGAARPAALVPDCADFPSCSFAPKPAVFTTSWAPVPSQPSVGYPHPHPHPAGPYAPQAAEPRYVRTWLEPLAGAVSFPAFGARPYGLKADAFGPPRRAECGPADGRAAYADFVYAAPGELRERAAQNVPSSPESEAIAAGKHKEEKHELDPNNPVANWIHARSTRKKRCPYTKYQTLELEKEFLFNMYLTRDRRYEVARVLNLTERQVKIWFQNRRMKMKKMNKEKSDKEQQ
SIO_010081: HOXC9
subclass of: SO_0000673
so part of: HOXC9
location: join(333151..333696,335577..335821)
location: region:333151-335821:1
so has part: feature:333151-333696:1:exon
so has part: feature:335577-335821:1:exon

XP_030823127.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:333151-333696:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:335577-335821:1:exon

HOXC8
type: Gene
subclass of: SO_0000704
RO_0002162: 87175
gene: HOXC8
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 346918..354082
location: region:346918-354082:1
so has part: feature:346918-354082:1:exon
subclass of: SO_0000010

115914626
type: Gene
SIO_000068: ncbigene

position:346918:1
position: 346918
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:354082:1
position: 354082
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:346918-354082:1:exon

HOXC8
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 87175
gene: HOXC8
product: homeobox C8
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 17 Proteins, and 98% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_030967250.1
SIO_010081: HOXC8
subclass of: SO_0000673
so part of: HOXC8
location: join(346918..347442,353685..354082)
location: region:346918-354082:1
so has part: feature:346918-347442:1:exon
so has part: feature:353685-354082:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:346918-347442:1:exon

position:347442:1
position: 347442
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:353685-354082:1:exon

position:353685:1
position: 353685
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

HOXC8
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 87175
gene: HOXC8
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: homeobox protein Hox-C8
translation: MSSYFVNPLFSKYKGGESLEPTYYDCRFPQSVGRGPAAVLYGPGGAAPAFQHPSHHVQEFFHHGASGISGSSGYQQNAPCALACHGDASKFYGYEALPRQALYGAQQDAPAVPYADCKSSAGGGGGGGGGAEGQGGHLSQSSSPSLMFPWMRPHAPGRRSGRQTYSRYQTLELEKEFLFNPYLTRKRRIEVSHALGLSERQVKIWFQNRRMKWKKENNKDKLPGAARGDEEKAEEEGNEEEEKEEEEKEESKE
SIO_010081: HOXC8
subclass of: SO_0000673
so part of: HOXC8
location: join(346980..347442,353685..353983)
location: region:346980-353983:1
so has part: feature:346980-347442:1:exon
so has part: feature:353685-353983:1:exon

XP_030823110.1
type: Protein
SIO_000068: ncbiprotein

position:346980:1
position: 346980
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:353983:1
position: 353983
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:346980-347442:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:353685-353983:1:exon

HOXC6
type: Gene
subclass of: SO_0000704
RO_0002162: 87175
gene: HOXC6
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 375826..378817
location: region:375826-378817:1
so has part: feature:375826-378817:1:exon
subclass of: SO_0000010

115914630
type: Gene
SIO_000068: ncbigene

position:375826:1
position: 375826
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:378817:1
position: 378817
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:375826-378817:1:exon

HOXC6
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 87175
gene: HOXC6
product: homeobox C6
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 11 Proteins, and 96% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_030967255.1
SIO_010081: HOXC6
subclass of: SO_0000673
so part of: HOXC6
location: join(375826..376358,378379..378596,378664..378817)
location: region:375826-378817:1
so has part: feature:375826-376358:1:exon
so has part: feature:378379-378596:1:exon
so has part: feature:378664-378817:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:375826-376358:1:exon

position:376358:1
position: 376358
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:378379-378596:1:exon

position:378379:1
position: 378379
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:378596:1
position: 378596
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:378664-378817:1:exon

position:378664:1
position: 378664
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

HOXC6
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 87175
gene: HOXC6
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: homeobox protein Hox-C6
translation: MNSYFTNPSLSCHLGGGQEVLPNVAALNSSYDPVRHFGGYGAAVAQNRIYSSPFYSAQENAVVFGSGRSPYEYGSNAFYQDKEVLSSCRQSSVGPHGTPNSIAQDFPGEQGRAAAQEQKSGIQIYPWMQRMNSHSGVGYGADRRRGRQIYSRYQTLELEKEFHFNRYLTRRRRIEIANALCLTERQIKIWFQNRRMKWKKETNLSSTLGGGGAAAADSLAKEEKRDETEEEKKE
SIO_010081: HOXC6
subclass of: SO_0000673
so part of: HOXC6
location: join(375953..376358,378379..378596,378664..378744)
location: region:375953-378744:1
so has part: feature:375953-376358:1:exon
so has part: feature:378379-378596:1:exon
so has part: feature:378664-378744:1:exon

XP_030823115.1
type: Protein
SIO_000068: ncbiprotein

position:375953:1
position: 375953
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:378744:1
position: 378744
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:375953-376358:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:378379-378596:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:378664-378744:1:exon

HOXC4
type: Gene
subclass of: SO_0000704
RO_0002162: 87175
gene: HOXC4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 402642..410047
location: region:402642-410047:1
so has part: feature:402642-410047:1:exon
subclass of: SO_0000010

115914451
type: Gene
SIO_000068: ncbigene

position:402642:1
position: 402642
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:410047:1
position: 410047
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:402642-410047:1:exon

HOXC4
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 87175
gene: HOXC4
product: homeobox C4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 16 Proteins, and 68% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_030966976.1
SIO_010081: HOXC4
subclass of: SO_0000673
so part of: HOXC4
location: join(402642..402842,402937..403054,409675..410047)
location: region:402642-410047:1
so has part: feature:402642-402842:1:exon
so has part: feature:402937-403054:1:exon
so has part: feature:409675-410047:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:402642-402842:1:exon

position:402842:1
position: 402842
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:402937-403054:1:exon

position:402937:1
position: 402937
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:403054:1
position: 403054
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:409675-410047:1:exon

position:409675:1
position: 409675
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

HOXC4
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 87175
gene: HOXC4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: homeobox protein Hox-C4
translation: MDSNYIDPKFPPCEEYSQSNYIPEPGAEFYARREPGAFPAHHAELFGQSRGAFPERPFGCGGLRAAGHLAEKPQLCEPPGPCAEPEGSAGKAPVVYPWMKKIHVSSVNPNFSGSEPKRSRTAYTRQQVLELEKEFHYNRYLTRGRRRIEIAHALSLSERQIKIWFQNRRMKWKKDHRLPNTKTRTAAPAPEPAQPPEPPGDITRL
SIO_010081: HOXC4
subclass of: SO_0000673
so part of: HOXC4
location: join(402642..402842,402937..403054,409675..409973)
location: region:402642-409973:1
so has part: feature:402642-402842:1:exon
so has part: feature:402937-403054:1:exon
so has part: feature:409675-409973:1:exon

XP_030822836.1
type: Protein
SIO_000068: ncbiprotein

position:409973:1
position: 409973
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:402642-402842:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:402937-403054:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:409675-409973:1:exon

SMUG1
type: Gene
subclass of: SO_0000704
RO_0002162: 87175
gene: SMUG1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(424504..427097)
location: region:424504-427097:-1
so has part: feature:424504-427097:-1:exon
subclass of: SO_0000010

115914627
type: Gene
SIO_000068: ncbigene

position:424504:-1
position: 424504
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:427097:-1
position: 427097
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:424504-427097:-1:exon

SMUG1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 87175
gene: SMUG1
product: single-strand-selective monofunctional uracil-DNA glycosylase 1
exception: unclassified transcription discrepancy
note: The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: deleted 2 bases in 2 codons; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 89% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_030967251.1
SIO_010081: SMUG1
subclass of: SO_0000673
so part of: SMUG1
location: complement(join(424504..425912,426297..426695,427067..427097))
location: region:424504-427097:-1
so has part: feature:427067-427097:-1:exon
so has part: feature:426297-426695:-1:exon
so has part: feature:424504-425912:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:427067-427097:-1:exon

position:427067:-1
position: 427067
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:426297-426695:-1:exon

position:426297:-1
position: 426297
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:426695:-1
position: 426695
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:424504-425912:-1:exon

position:425912:-1
position: 425912
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

SMUG1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 87175
gene: SMUG1
exception: unclassified translation discrepancy
note: The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: deleted 2 bases in 2 codons; Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: LOW QUALITY PROTEIN: single-strand selective monofunctional uracil DNA glycosylase
translation: MEREEEEEEGAGVGDEEGAGAEEDDGAKAEEAGAADDDAEDAEDEDADGSEAEGVAGRFLALQRALSERLRALPPPGPPVALVYAPLEYAWEPHRSFVRRFLRGPKAVLFLGMNPGPFGMAQTGVPFGEAWHVREWLRVSGAVRRPPREHPKRPVLGLRCPRAEVSGARFWGLVRSLCPDPRAFFRHCFVHNLCPLLFLAASGRNVAPPELRAAERERLLAPCGAALAAAVRALRVRLVVALGRVAELRAPRAAGAGLAVPVAWIPHPSPRNPRANRGWEGEARRRLRELGVLRLMGVRDEAGAERLRAGECGLGGALDQLGAGECGLGGCLPQFDQFGTGDSGLGGSLDPLDQFGTGESGVGGSLTRFGAGGSLDQFDQLGTGEKGIDGSLPQLDQFGAGEEGVGGSLPQFNQFGTRKKGIRGSLPQFGTGEKGIDGSLDQLGTGGKDASGSLPQSDQSGTGEKGIREPLPQFGTGGKGIDGALPQFPHSEQDLGQHYRAEGEPLPQFPRSGGGLGLL
SIO_010081: SMUG1
subclass of: SO_0000673
so part of: SMUG1
location: complement(join(424723..425912,426297..426668))
location: region:424723-426668:-1
so has part: feature:426297-426668:-1:exon
so has part: feature:424723-425912:-1:exon

XP_030823111.1
type: Protein
SIO_000068: ncbiprotein

position:424723:-1
position: 424723
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:426668:-1
position: 426668
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:426297-426668:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:424723-425912:-1:exon

CBX5
type: Gene
subclass of: SO_0000704
RO_0002162: 87175
gene: CBX5
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(427985..431503)
location: region:427985-431503:-1
so has part: feature:427985-431503:-1:exon
subclass of: SO_0000010

115914614
type: Gene
SIO_000068: ncbigene

position:427985:-1
position: 427985
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:431503:-1
position: 431503
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:427985-431503:-1:exon

CBX5
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 87175
gene: CBX5
product: chromobox 5, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, 28 Proteins, and 96% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
transcript id: XM_030967229.1
SIO_010081: CBX5
subclass of: SO_0000673
so part of: CBX5
location: complement(join(427985..428401,428685..428782,428925..429111,429428..429579,431406..431503))
location: region:427985-431503:-1
so has part: feature:431406-431503:-1:exon
so has part: feature:429428-429579:-1:exon
so has part: feature:428925-429111:-1:exon
so has part: feature:428685-428782:-1:exon
so has part: feature:427985-428401:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:431406-431503:-1:exon

position:431406:-1
position: 431406
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:429428-429579:-1:exon

position:429428:-1
position: 429428
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:429579:-1
position: 429579
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:428925-429111:-1:exon

position:428925:-1
position: 428925
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:429111:-1
position: 429111
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:428685-428782:-1:exon

position:428685:-1
position: 428685
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:428782:-1
position: 428782
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:427985-428401:-1:exon

position:428401:-1
position: 428401
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

CBX5
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 87175
gene: CBX5
product: chromobox 5, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 28 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
transcript id: XM_030967231.1
SIO_010081: CBX5
subclass of: SO_0000673
so part of: CBX5
location: complement(join(427985..428401,428685..428782,428925..429111,429428..429579,431207..431301))
location: region:427985-431301:-1
so has part: feature:431207-431301:-1:exon
so has part: feature:429428-429579:-1:exon
so has part: feature:428925-429111:-1:exon
so has part: feature:428685-428782:-1:exon
so has part: feature:427985-428401:-1:exon

position:431301:-1
position: 431301
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:431207-431301:-1:exon

position:431207:-1
position: 431207
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:429428-429579:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:428925-429111:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:428685-428782:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:427985-428401:-1:exon

CBX5
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 87175
gene: CBX5
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: chromobox protein homolog 5
translation: MGRRSRRAADSSSSGEEEEYVVEKVLDRRVVRGQAEYLLKWKGFSEEHNTWEPEKNLDCPELISQFLRKDRRMRDMRDSEGTRPRERPEGAKRKGLPGEDGRAKKKRESNDIARGFERGLEPEKIIGATDSCGDLMFLMKWKDTDEADLVLAKEANLKCPQIVIAFYEERLTWHAYPEDSEPKERDPPRS
SIO_010081: CBX5
subclass of: SO_0000673
so part of: CBX5
location: complement(join(428251..428401,428685..428782,428925..429111,429428..429564))
location: region:428251-429564:-1
so has part: feature:429428-429564:-1:exon
so has part: feature:428925-429111:-1:exon
so has part: feature:428685-428782:-1:exon
so has part: feature:428251-428401:-1:exon

XP_030823089.1
type: Protein
SIO_000068: ncbiprotein

position:428251:-1
position: 428251
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:429564:-1
position: 429564
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:429428-429564:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:428925-429111:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:428685-428782:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:428251-428401:-1:exon

CBX5
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 87175
gene: CBX5
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: chromobox protein homolog 5
translation: MGRRSRRAADSSSSGEEEEYVVEKVLDRRVVRGQAEYLLKWKGFSEEHNTWEPEKNLDCPELISQFLRKDRRMRDMRDSEGTRPRERPEGAKRKGLPGEDGRAKKKRESNDIARGFERGLEPEKIIGATDSCGDLMFLMKWKDTDEADLVLAKEANLKCPQIVIAFYEERLTWHAYPEDSEPKERDPPRS
SIO_010081: CBX5
subclass of: SO_0000673
so part of: CBX5
location: complement(join(428251..428401,428685..428782,428925..429111,429428..429564))
location: region:428251-429564:-1
so has part: feature:429428-429564:-1:exon
so has part: feature:428925-429111:-1:exon
so has part: feature:428685-428782:-1:exon
so has part: feature:428251-428401:-1:exon

XP_030823091.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:429428-429564:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:428925-429111:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:428685-428782:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:428251-428401:-1:exon

HNRNPA1
type: Gene
subclass of: SO_0000704
RO_0002162: 87175
gene: HNRNPA1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 431841..441477
location: region:431841-441477:1
so has part: feature:431841-441477:1:exon
subclass of: SO_0000010

115914608
type: Gene
SIO_000068: ncbigene

position:431841:1
position: 431841
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:441477:1
position: 441477
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:431841-441477:1:exon

HNRNPA1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 87175
gene: HNRNPA1
product: heterogeneous nuclear ribonucleoprotein A1
exception: unclassified transcription discrepancy
note: The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: deleted 2 bases in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 19 ESTs, 32 Proteins, and 85% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_030967217.1
SIO_010081: HNRNPA1
subclass of: SO_0000673
so part of: HNRNPA1
location: join(431841..431975,433354..433470,435071..435217,435753..435963,437106..437198,437271..437365,437479..437529,438963..439085,439691..439753,441326..441477)
location: region:431841-441477:1
so has part: feature:431841-431975:1:exon
so has part: feature:433354-433470:1:exon
so has part: feature:435071-435217:1:exon
so has part: feature:435753-435963:1:exon
so has part: feature:437106-437198:1:exon
so has part: feature:437271-437365:1:exon
so has part: feature:437479-437529:1:exon
so has part: feature:438963-439085:1:exon
so has part: feature:439691-439753:1:exon
so has part: feature:441326-441477:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:431841-431975:1:exon

position:431975:1
position: 431975
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:433354-433470:1:exon

position:433354:1
position: 433354
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:433470:1
position: 433470
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:435071-435217:1:exon

position:435071:1
position: 435071
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:435217:1
position: 435217
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:435753-435963:1:exon

position:435753:1
position: 435753
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:435963:1
position: 435963
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:437106-437198:1:exon

position:437106:1
position: 437106
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:437198:1
position: 437198
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:437271-437365:1:exon

position:437271:1
position: 437271
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:437365:1
position: 437365
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:437479-437529:1:exon

position:437479:1
position: 437479
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:437529:1
position: 437529
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:438963-439085:1:exon

position:438963:1
position: 438963
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:439085:1
position: 439085
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:439691-439753:1:exon

position:439691:1
position: 439691
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:439753:1
position: 439753
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:441326-441477:1:exon

position:441326:1
position: 441326
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

HNRNPA1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 87175
gene: HNRNPA1
exception: unclassified translation discrepancy
note: The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: deleted 2 bases in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: LOW QUALITY PROTEIN: heterogeneous nuclear ribonucleoprotein A1
translation: MAKAESPKEPEQLRKLFIGGLSFETTDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFVTYSSVEEVDAAMNARPHKVDGRVVEPKRAVSREDSQRPGAHLTVKKIFVGGIKEDTEEHHLRDYFGQYGKIEVIEIMTDRGSGKKRGFAFVTFDDHDSVDKIVIQKYHTVNGHNCEVRKALSKQEMASASAGQRGRSGSGNFGGGRRGGFGGGDNFNRGGNFGGRGAFGGGRGDGFNGFGADGSNFGGGGSYNDFGSYNNQASSFGPMKGGSFGGRSSGPYGGGGYGSSSGGGSYGGGRRF
SIO_010081: HNRNPA1
subclass of: SO_0000673
so part of: HNRNPA1
location: join(431961..431975,433354..433470,435071..435217,435753..435963,437106..437198,437271..437365,437479..437529,438963..439085,439691..439746)
location: region:431961-439746:1
so has part: feature:431961-431975:1:exon
so has part: feature:433354-433470:1:exon
so has part: feature:435071-435217:1:exon
so has part: feature:435753-435963:1:exon
so has part: feature:437106-437198:1:exon
so has part: feature:437271-437365:1:exon
so has part: feature:437479-437529:1:exon
so has part: feature:438963-439085:1:exon
so has part: feature:439691-439746:1:exon

XP_030823077.1
type: Protein
SIO_000068: ncbiprotein

position:431961:1
position: 431961
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:439746:1
position: 439746
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:431961-431975:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:433354-433470:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:435071-435217:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:435753-435963:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:437106-437198:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:437271-437365:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:437479-437529:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:438963-439085:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:439691-439746:1:exon

COPZ1
type: Gene
subclass of: SO_0000704
RO_0002162: 87175
gene: COPZ1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 442280..448446
location: region:442280-448446:1
so has part: feature:442280-448446:1:exon
subclass of: SO_0000010

115914452
type: Gene
SIO_000068: ncbigene

position:442280:1
position: 442280
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:448446:1
position: 448446
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:442280-448446:1:exon

COPZ1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 87175
gene: COPZ1
product: coatomer protein complex subunit zeta 1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 16 Proteins, and 69% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_030966977.1
SIO_010081: COPZ1
subclass of: SO_0000673
so part of: COPZ1
location: join(442280..442353,443826..443894,444226..444307,445415..445506,445793..445806,446512..446643,447887..447947,448257..448446)
location: region:442280-448446:1
so has part: feature:442280-442353:1:exon
so has part: feature:443826-443894:1:exon
so has part: feature:444226-444307:1:exon
so has part: feature:445415-445506:1:exon
so has part: feature:445793-445806:1:exon
so has part: feature:446512-446643:1:exon
so has part: feature:447887-447947:1:exon
so has part: feature:448257-448446:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:442280-442353:1:exon

position:442353:1
position: 442353
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:443826-443894:1:exon

position:443826:1
position: 443826
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:443894:1
position: 443894
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:444226-444307:1:exon

position:444226:1
position: 444226
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:444307:1
position: 444307
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:445415-445506:1:exon

position:445415:1
position: 445415
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:445506:1
position: 445506
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:445793-445806:1:exon

position:445793:1
position: 445793
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:445806:1
position: 445806
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:446512-446643:1:exon

position:446512:1
position: 446512
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:446643:1
position: 446643
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:447887-447947:1:exon

position:447887:1
position: 447887
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:447947:1
position: 447947
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:448257-448446:1:exon

position:448257:1
position: 448257
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

COPZ1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 87175
gene: COPZ1
note: The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: substituted 1 base at 1 genomic stop codon; Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
transl except: (pos:445438..445440,aa:OTHER)
product: LOW QUALITY PROTEIN: coatomer subunit zeta-1
translation: MEALVLEPSLYTVKAIIILDNDGERLFAKYYDDTYPSVKEQRAFEKNIFSKTHRSDSESDSDHGXHTGDKSSIDLYCCVIGSATQNELGRLTPVPCVPSVSPQCPPCPRRKNVERRALLDNMEGLFLAVDEIVDGGPLSPLSQGEDVPLTEQTVSQVLQSAKEQIKWSLLR
SIO_010081: COPZ1
subclass of: SO_0000673
so part of: COPZ1
location: join(442336..442353,443826..443894,444226..444307,445415..445506,445793..445806,446512..446643,447887..447947,448257..448304)
location: region:442336-448304:1
so has part: feature:442336-442353:1:exon
so has part: feature:443826-443894:1:exon
so has part: feature:444226-444307:1:exon
so has part: feature:445415-445506:1:exon
so has part: feature:445793-445806:1:exon
so has part: feature:446512-446643:1:exon
so has part: feature:447887-447947:1:exon
so has part: feature:448257-448304:1:exon

XP_030822837.1
type: Protein
SIO_000068: ncbiprotein

position:442336:1
position: 442336
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:448304:1
position: 448304
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:442336-442353:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:443826-443894:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:444226-444307:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:445415-445506:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:445793-445806:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:446512-446643:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:447887-447947:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:448257-448304:1:exon

ATF1
type: Gene
subclass of: SO_0000704
RO_0002162: 87175
gene: ATF1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 443774..894075
location: region:443774-894075:1
so has part: feature:443774-894075:1:exon
subclass of: SO_0000010

115914594
type: Gene
SIO_000068: ncbigene

position:443774:1
position: 443774
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:894075:1
position: 894075
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:443774-894075:1:exon

ATF1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 87175
gene: ATF1
product: activating transcription factor 1, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 10 ESTs, 37 Proteins, and 97% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_030967199.1
SIO_010081: ATF1
subclass of: SO_0000673
so part of: ATF1
location: join(443774..443780,453534..453538,458236..458251,853649..853656,885836..885949,887160..887288,888599..888699,889002..889132,889825..890245,891128..894075)
location: region:443774-894075:1
so has part: feature:443774-443780:1:exon
so has part: feature:453534-453538:1:exon
so has part: feature:458236-458251:1:exon
so has part: feature:853649-853656:1:exon
so has part: feature:885836-885949:1:exon
so has part: feature:887160-887288:1:exon
so has part: feature:888599-888699:1:exon
so has part: feature:889002-889132:1:exon
so has part: feature:889825-890245:1:exon
so has part: feature:891128-894075:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:443774-443780:1:exon

position:443780:1
position: 443780
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:453534-453538:1:exon

position:453534:1
position: 453534
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:453538:1
position: 453538
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:458236-458251:1:exon

position:458236:1
position: 458236
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:458251:1
position: 458251
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:853649-853656:1:exon

position:853649:1
position: 853649
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:853656:1
position: 853656
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:885836-885949:1:exon

position:885836:1
position: 885836
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:885949:1
position: 885949
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:887160-887288:1:exon

position:887160:1
position: 887160
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:887288:1
position: 887288
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:888599-888699:1:exon

position:888599:1
position: 888599
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:888699:1
position: 888699
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:889002-889132:1:exon

position:889002:1
position: 889002
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:889132:1
position: 889132
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:889825-890245:1:exon

position:889825:1
position: 889825
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:890245:1
position: 890245
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:891128-894075:1:exon

position:891128:1
position: 891128
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

ZNF385A
type: Gene
subclass of: SO_0000704
RO_0002162: 87175
gene: ZNF385A
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(450195..457767)
location: region:450195-457767:-1
so has part: feature:450195-457767:-1:exon
subclass of: SO_0000010

115914453
type: Gene
SIO_000068: ncbigene

position:450195:-1
position: 450195
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:457767:-1
position: 457767
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:450195-457767:-1:exon

ZNF385A
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 87175
gene: ZNF385A
product: zinc finger protein 385A
exception: unclassified transcription discrepancy
note: The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: inserted 1 base in 1 codon; deleted 3 bases in 2 codons; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins, and 67% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_030966978.1
SIO_010081: ZNF385A
subclass of: SO_0000673
so part of: ZNF385A
location: complement(join(450195..451638,452084..452175,453195..453362,454377..454489,455461..455580,456081..456115,456705..456800,457657..457767))
location: region:450195-457767:-1
so has part: feature:457657-457767:-1:exon
so has part: feature:456705-456800:-1:exon
so has part: feature:456081-456115:-1:exon
so has part: feature:455461-455580:-1:exon
so has part: feature:454377-454489:-1:exon
so has part: feature:453195-453362:-1:exon
so has part: feature:452084-452175:-1:exon
so has part: feature:450195-451638:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:457657-457767:-1:exon

position:457657:-1
position: 457657
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:456705-456800:-1:exon

position:456705:-1
position: 456705
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:456800:-1
position: 456800
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:456081-456115:-1:exon

position:456081:-1
position: 456081
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:456115:-1
position: 456115
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:455461-455580:-1:exon

position:455461:-1
position: 455461
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:455580:-1
position: 455580
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:454377-454489:-1:exon

position:454377:-1
position: 454377
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:454489:-1
position: 454489
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:453195-453362:-1:exon

position:453195:-1
position: 453195
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:453362:-1
position: 453362
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:452084-452175:-1:exon

position:452084:-1
position: 452084
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:452175:-1
position: 452175
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:450195-451638:-1:exon

position:451638:-1
position: 451638
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

ZNF385A
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 87175
gene: ZNF385A
exception: unclassified translation discrepancy
note: The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: inserted 1 base in 1 codon; deleted 3 bases in 2 codons; Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: LOW QUALITY PROTEIN: zinc finger protein 385A
translation: MLRAPGPPLGPPPAASSCPTAAAAAAAALRLLPPLPAMEALPKAGLGALAKPRRPVIACSVCQIRFNSESQAAAHYQGNGLARPPPPGNAPRARGLEAARRGPRKPPDSPPAAPARKPQARSGGQEEEEERAKAKRLLYCGLCKVAVNSLSQLEAHNKGTKHKTLVEARSGLGPIRAFPRGGGSGGAPPAEGPERSFHCQICNVRLNSELQLKQHISSRRHRDGVAGKPNPLLGRHXKPRSPPELAPLPFPTSCPRPLGGAPPPLAPAAAPLARAAPPAIPLALRGPAPLLPGPPLGPALLRPAPGPLRPGHAPLLFTPY
SIO_010081: ZNF385A
subclass of: SO_0000673
so part of: ZNF385A
location: complement(join(451409..451638,452084..452175,453195..453362,454377..454489,455461..455580,456081..456115,456705..456800,457657..457767))
location: region:451409-457767:-1
so has part: feature:457657-457767:-1:exon
so has part: feature:456705-456800:-1:exon
so has part: feature:456081-456115:-1:exon
so has part: feature:455461-455580:-1:exon
so has part: feature:454377-454489:-1:exon
so has part: feature:453195-453362:-1:exon
so has part: feature:452084-452175:-1:exon
so has part: feature:451409-451638:-1:exon

XP_030822838.1
type: Protein
SIO_000068: ncbiprotein

position:451409:-1
position: 451409
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:457657-457767:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:456705-456800:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:456081-456115:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:455461-455580:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:454377-454489:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:453195-453362:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:452084-452175:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:451409-451638:-1:exon

ITGA5
type: Gene
subclass of: SO_0000704
RO_0002162: 87175
gene: ITGA5
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(460888..483638)
location: region:460888-483638:-1
so has part: feature:460888-483638:-1:exon
subclass of: SO_0000010

115914454
type: Gene
SIO_000068: ncbigene

position:460888:-1
position: 460888
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:483638:-1
position: 483638
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:460888-483638:-1:exon

ITGA5
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 87175
gene: ITGA5
product: integrin subunit alpha 5
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 86% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_030966979.1
SIO_010081: ITGA5
subclass of: SO_0000673
so part of: ITGA5
location: complement(join(460888..462896,463396..463503,463575..463607,463696..463761,464976..465089,465405..465479,466721..466870,467558..467660,469124..469204,469581..469660,470170..470262,470708..470777,471282..471346,472274..472411,473111..473280,473658..473713,474048..474152,474230..474275,475180..475348,476392..476695,477402..477454,477728..477784,477964..478007,478100..478144,478689..478814,479315..479360,480112..480170,480740..480866,481660..481772,482338..482465,483464..483638))
location: region:460888-483638:-1
so has part: feature:483464-483638:-1:exon
so has part: feature:482338-482465:-1:exon
so has part: feature:481660-481772:-1:exon
so has part: feature:480740-480866:-1:exon
so has part: feature:480112-480170:-1:exon
so has part: feature:479315-479360:-1:exon
so has part: feature:478689-478814:-1:exon
so has part: feature:478100-478144:-1:exon
so has part: feature:477964-478007:-1:exon
so has part: feature:477728-477784:-1:exon
so has part: feature:477402-477454:-1:exon
so has part: feature:476392-476695:-1:exon
so has part: feature:475180-475348:-1:exon
so has part: feature:474230-474275:-1:exon
so has part: feature:474048-474152:-1:exon
so has part: feature:473658-473713:-1:exon
so has part: feature:473111-473280:-1:exon
so has part: feature:472274-472411:-1:exon
so has part: feature:471282-471346:-1:exon
so has part: feature:470708-470777:-1:exon
so has part: feature:470170-470262:-1:exon
so has part: feature:469581-469660:-1:exon
so has part: feature:469124-469204:-1:exon
so has part: feature:467558-467660:-1:exon
so has part: feature:466721-466870:-1:exon
so has part: feature:465405-465479:-1:exon
so has part: feature:464976-465089:-1:exon
so has part: feature:463696-463761:-1:exon
so has part: feature:463575-463607:-1:exon
so has part: feature:463396-463503:-1:exon
so has part: feature:460888-462896:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:483464-483638:-1:exon

position:483464:-1
position: 483464
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:482338-482465:-1:exon

position:482338:-1
position: 482338
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:482465:-1
position: 482465
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:481660-481772:-1:exon

position:481660:-1
position: 481660
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:481772:-1
position: 481772
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:480740-480866:-1:exon

position:480740:-1
position: 480740
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:480866:-1
position: 480866
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:480112-480170:-1:exon

position:480112:-1
position: 480112
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:480170:-1
position: 480170
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:479315-479360:-1:exon

position:479315:-1
position: 479315
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:479360:-1
position: 479360
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:478689-478814:-1:exon

position:478689:-1
position: 478689
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:478814:-1
position: 478814
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:478100-478144:-1:exon

position:478100:-1
position: 478100
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:478144:-1
position: 478144
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:477964-478007:-1:exon

position:477964:-1
position: 477964
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:478007:-1
position: 478007
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:477728-477784:-1:exon

position:477728:-1
position: 477728
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:477784:-1
position: 477784
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:477402-477454:-1:exon

position:477402:-1
position: 477402
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:477454:-1
position: 477454
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:476392-476695:-1:exon

position:476392:-1
position: 476392
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:476695:-1
position: 476695
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:475180-475348:-1:exon

position:475180:-1
position: 475180
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:475348:-1
position: 475348
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:474230-474275:-1:exon

position:474230:-1
position: 474230
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:474275:-1
position: 474275
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:474048-474152:-1:exon

position:474048:-1
position: 474048
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:474152:-1
position: 474152
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:473658-473713:-1:exon

position:473658:-1
position: 473658
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:473713:-1
position: 473713
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:473111-473280:-1:exon

position:473111:-1
position: 473111
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:473280:-1
position: 473280
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:472274-472411:-1:exon

position:472274:-1
position: 472274
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:472411:-1
position: 472411
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:471282-471346:-1:exon

position:471282:-1
position: 471282
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:471346:-1
position: 471346
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:470708-470777:-1:exon

position:470708:-1
position: 470708
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:470777:-1
position: 470777
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:470170-470262:-1:exon

position:470170:-1
position: 470170
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:470262:-1
position: 470262
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 22
SIO_000628: feature:469581-469660:-1:exon

position:469581:-1
position: 469581
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:469660:-1
position: 469660
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 23
SIO_000628: feature:469124-469204:-1:exon

position:469124:-1
position: 469124
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:469204:-1
position: 469204
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 24
SIO_000628: feature:467558-467660:-1:exon

position:467558:-1
position: 467558
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:467660:-1
position: 467660
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 25
SIO_000628: feature:466721-466870:-1:exon

position:466721:-1
position: 466721
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:466870:-1
position: 466870
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 26
SIO_000628: feature:465405-465479:-1:exon

position:465405:-1
position: 465405
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:465479:-1
position: 465479
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 27
SIO_000628: feature:464976-465089:-1:exon

position:464976:-1
position: 464976
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:465089:-1
position: 465089
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 28
SIO_000628: feature:463696-463761:-1:exon

position:463696:-1
position: 463696
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:463761:-1
position: 463761
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 29
SIO_000628: feature:463575-463607:-1:exon

position:463575:-1
position: 463575
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:463607:-1
position: 463607
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 30
SIO_000628: feature:463396-463503:-1:exon

position:463396:-1
position: 463396
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:463503:-1
position: 463503
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 31
SIO_000628: feature:460888-462896:-1:exon

position:462896:-1
position: 462896
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

ITGA5
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 87175
gene: ITGA5
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: integrin alpha-5
translation: MALPVPLPVPLLLPLLLPPVAAFNLEASRPVVFRGAPGSFFGFALDFYLPEPRSVSILVGAPKANTSQPNVTQGGAVFHCPWPPEGGCAPIDFDHIGTRTHDFGGNSSDGAEPVEFKSLQWFGATVRAHNGSILACAPLYSWSPPKKEGGAREPVGSCFLSLGNFSKFVEYAPCRSETRNFAGQGLCGGFSAEFTQTGRVLLGGPGSFFWQGQVMSATQEQITAGNFPEYLIQEVPGQLQTRQAEPSHDDSYMGYSVAVGEFSGDTTQDFVAGVPKGNLTYGYVTILNGTNMKSLYNFSGEQMASYFGYAVAATDVNNDGLTDLLVGAPLFMARAAAAGRGRVPAAGARRPRPAPQRAAPRPPRPGPAGYNGTGGQWCRGQWYRRVTDRRIQRYRDAARTGTDTTVPGAMVPGKRDRADTTTWPWGPAGARVAGGSCSSSRRGCGPARRCCGGRGAGSPTSGARARRGSDLDGNGYPDLLVGAFGADAAVVYRGRPIVHASATLAIVPSMFNPEERGCALASGHHVSCINVTFCLNASGRHLPGPIGLALELSVDGAKAGGARRALFLGGGAGGAPPSPTRNLSLEVPNGGSPRCRTLPVFLRNESEFRDKLSPIPVSLSLALDPAVSPAPPGLSPLLSPATRTRLEAKAHIQLDCEDNVCVPDLQLEASADRRAVFLGDRNSERGVPGATVLGNFSALSCELGGGNGSGALVCDLGNPMKAGASIWGGLRFTLPHLSDNSSSVRFELQIRSKNANNSQSALVPVALAVRAATRVSVLGVSRPDVVTIPEGGWGPDPPQRLQDLGPPVEHVYEVVNEGPGAISQGTLELSCPLGHRGHPLLYVTGHEGLHNCTASQASDPLGLEREQSPAPPRGSAGTAGTALGTAGTGCPEAECFRLSCPSGPLQRQQRVTLRLSFRLRSPPVRQVVTALSRARPEAGGGVPVWAVAVVTALSRARPERCRGPGPRRGVPVWAVVLAVLLGLLLLGLLCYGLYKLGFFKRSGPYGTAMEKAQLKPQAASEA
SIO_010081: ITGA5
subclass of: SO_0000673
so part of: ITGA5
location: complement(join(462813..462896,463396..463503,463575..463607,463696..463761,464976..465089,465405..465479,466721..466870,467558..467660,469124..469204,469581..469660,470170..470262,470708..470777,471282..471346,472274..472411,473111..473280,473658..473713,474048..474152,474230..474275,475180..475348,476392..476695,477402..477454,477728..477784,477964..478007,478100..478144,478689..478814,479315..479360,480112..480170,480740..480866,481660..481772,482338..482465,483464..483624))
location: region:462813-483624:-1
so has part: feature:483464-483624:-1:exon
so has part: feature:482338-482465:-1:exon
so has part: feature:481660-481772:-1:exon
so has part: feature:480740-480866:-1:exon
so has part: feature:480112-480170:-1:exon
so has part: feature:479315-479360:-1:exon
so has part: feature:478689-478814:-1:exon
so has part: feature:478100-478144:-1:exon
so has part: feature:477964-478007:-1:exon
so has part: feature:477728-477784:-1:exon
so has part: feature:477402-477454:-1:exon
so has part: feature:476392-476695:-1:exon
so has part: feature:475180-475348:-1:exon
so has part: feature:474230-474275:-1:exon
so has part: feature:474048-474152:-1:exon
so has part: feature:473658-473713:-1:exon
so has part: feature:473111-473280:-1:exon
so has part: feature:472274-472411:-1:exon
so has part: feature:471282-471346:-1:exon
so has part: feature:470708-470777:-1:exon
so has part: feature:470170-470262:-1:exon
so has part: feature:469581-469660:-1:exon
so has part: feature:469124-469204:-1:exon
so has part: feature:467558-467660:-1:exon
so has part: feature:466721-466870:-1:exon
so has part: feature:465405-465479:-1:exon
so has part: feature:464976-465089:-1:exon
so has part: feature:463696-463761:-1:exon
so has part: feature:463575-463607:-1:exon
so has part: feature:463396-463503:-1:exon
so has part: feature:462813-462896:-1:exon

XP_030822839.1
type: Protein
SIO_000068: ncbiprotein

position:462813:-1
position: 462813
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:483624:-1
position: 483624
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:483464-483624:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:482338-482465:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:481660-481772:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:480740-480866:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:480112-480170:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:479315-479360:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:478689-478814:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:478100-478144:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:477964-478007:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:477728-477784:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:477402-477454:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:476392-476695:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:475180-475348:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:474230-474275:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:474048-474152:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:473658-473713:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:473111-473280:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:472274-472411:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:471282-471346:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:470708-470777:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:470170-470262:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:469581-469660:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:469124-469204:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:467558-467660:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:466721-466870:-1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:465405-465479:-1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:464976-465089:-1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:463696-463761:-1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:463575-463607:-1:exon

urn:…
SIO_000300: 30
SIO_000628: feature:463396-463503:-1:exon

urn:…
SIO_000300: 31
SIO_000628: feature:462813-462896:-1:exon

GTSF1
type: Gene
subclass of: SO_0000704
RO_0002162: 87175
gene: GTSF1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(489286..493197)
location: region:489286-493197:-1
so has part: feature:489286-493197:-1:exon
subclass of: SO_0000010

115914455
type: Gene
SIO_000068: ncbigene

position:489286:-1
position: 489286
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:493197:-1
position: 493197
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:489286-493197:-1:exon

GTSF1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 87175
gene: GTSF1
product: gametocyte specific factor 1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 85% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_030966980.1
SIO_010081: GTSF1
subclass of: SO_0000673
so part of: GTSF1
location: complement(join(489286..489529,491251..491332,491683..491751,491852..491978,492872..493197))
location: region:489286-493197:-1
so has part: feature:492872-493197:-1:exon
so has part: feature:491852-491978:-1:exon
so has part: feature:491683-491751:-1:exon
so has part: feature:491251-491332:-1:exon
so has part: feature:489286-489529:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:492872-493197:-1:exon

position:492872:-1
position: 492872
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:491852-491978:-1:exon

position:491852:-1
position: 491852
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:491978:-1
position: 491978
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:491683-491751:-1:exon

position:491683:-1
position: 491683
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:491751:-1
position: 491751
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:491251-491332:-1:exon

position:491251:-1
position: 491251
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:491332:-1
position: 491332
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:489286-489529:-1:exon

position:489529:-1
position: 489529
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

GTSF1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 87175
gene: GTSF1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: gametocyte-specific factor 1
translation: MEPDALVQCPYDRSHQVRVSRLPYHLVRCQQNNPQVSRTLATCPFNARHRVPRALLRAHVTSCPDKLPLELPPDPEDMAKTAHTWQPPPCREDWDAELSELELEEPPPFILQVTKGDLPVPCRSPDPAAPPEGLALRKPRPATAGPRLGTAGPRLGTAGPRLGTAGPRSGTARPRPVTAGGARGVAGPGGAPPAVTYFRKLKQK
SIO_010081: GTSF1
subclass of: SO_0000673
so part of: GTSF1
location: complement(join(489286..489529,491251..491332,491683..491751,491852..491978,492872..492964))
location: region:489286-492964:-1
so has part: feature:492872-492964:-1:exon
so has part: feature:491852-491978:-1:exon
so has part: feature:491683-491751:-1:exon
so has part: feature:491251-491332:-1:exon
so has part: feature:489286-489529:-1:exon

XP_030822840.1
type: Protein
SIO_000068: ncbiprotein

position:492964:-1
position: 492964
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:492872-492964:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:491852-491978:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:491683-491751:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:491251-491332:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:489286-489529:-1:exon

NCKAP1L
type: Gene
subclass of: SO_0000704
RO_0002162: 87175
gene: NCKAP1L
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 495282..509811
location: region:495282-509811:1
so has part: feature:495282-509811:1:exon
subclass of: SO_0000010

115914456
type: Gene
SIO_000068: ncbigene

position:495282:1
position: 495282
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:509811:1
position: 509811
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:495282-509811:1:exon

NCKAP1L
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 87175
gene: NCKAP1L
product: NCK associated protein 1 like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 Proteins, and 93% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_030966982.1
SIO_010081: NCKAP1L
subclass of: SO_0000673
so part of: NCKAP1L
location: join(495282..495402,495848..495958,496322..496414,496821..496877,496957..497099,497556..497646,498525..498573,499090..499240,499772..499845,500711..500805,501110..501219,501600..501732,501813..501894,502126..502184,502684..502829,503270..503402,503480..503599,504124..504263,504601..504732,505209..505427,506073..506203,506284..506381,507210..507297,507382..507464,507638..507718,507813..507906,507987..508103,508646..508755,509128..509217,509682..509811)
location: region:495282-509811:1
so has part: feature:495282-495402:1:exon
so has part: feature:495848-495958:1:exon
so has part: feature:496322-496414:1:exon
so has part: feature:496821-496877:1:exon
so has part: feature:496957-497099:1:exon
so has part: feature:497556-497646:1:exon
so has part: feature:498525-498573:1:exon
so has part: feature:499090-499240:1:exon
so has part: feature:499772-499845:1:exon
so has part: feature:500711-500805:1:exon
so has part: feature:501110-501219:1:exon
so has part: feature:501600-501732:1:exon
so has part: feature:501813-501894:1:exon
so has part: feature:502126-502184:1:exon
so has part: feature:502684-502829:1:exon
so has part: feature:503270-503402:1:exon
so has part: feature:503480-503599:1:exon
so has part: feature:504124-504263:1:exon
so has part: feature:504601-504732:1:exon
so has part: feature:505209-505427:1:exon
so has part: feature:506073-506203:1:exon
so has part: feature:506284-506381:1:exon
so has part: feature:507210-507297:1:exon
so has part: feature:507382-507464:1:exon
so has part: feature:507638-507718:1:exon
so has part: feature:507813-507906:1:exon
so has part: feature:507987-508103:1:exon
so has part: feature:508646-508755:1:exon
so has part: feature:509128-509217:1:exon
so has part: feature:509682-509811:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:495282-495402:1:exon

position:495402:1
position: 495402
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:495848-495958:1:exon

position:495848:1
position: 495848
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:495958:1
position: 495958
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:496322-496414:1:exon

position:496322:1
position: 496322
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:496414:1
position: 496414
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:496821-496877:1:exon

position:496821:1
position: 496821
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:496877:1
position: 496877
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:496957-497099:1:exon

position:496957:1
position: 496957
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:497099:1
position: 497099
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:497556-497646:1:exon

position:497556:1
position: 497556
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:497646:1
position: 497646
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:498525-498573:1:exon

position:498525:1
position: 498525
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:498573:1
position: 498573
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:499090-499240:1:exon

position:499090:1
position: 499090
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:499240:1
position: 499240
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:499772-499845:1:exon

position:499772:1
position: 499772
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:499845:1
position: 499845
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:500711-500805:1:exon

position:500711:1
position: 500711
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:500805:1
position: 500805
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:501110-501219:1:exon

position:501110:1
position: 501110
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:501219:1
position: 501219
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:501600-501732:1:exon

position:501600:1
position: 501600
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:501732:1
position: 501732
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:501813-501894:1:exon

position:501813:1
position: 501813
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:501894:1
position: 501894
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:502126-502184:1:exon

position:502126:1
position: 502126
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:502184:1
position: 502184
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:502684-502829:1:exon

position:502684:1
position: 502684
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:502829:1
position: 502829
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:503270-503402:1:exon

position:503270:1
position: 503270
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:503402:1
position: 503402
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:503480-503599:1:exon

position:503480:1
position: 503480
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:503599:1
position: 503599
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:504124-504263:1:exon

position:504124:1
position: 504124
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:504263:1
position: 504263
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:504601-504732:1:exon

position:504601:1
position: 504601
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:504732:1
position: 504732
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:505209-505427:1:exon

position:505209:1
position: 505209
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:505427:1
position: 505427
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:506073-506203:1:exon

position:506073:1
position: 506073
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:506203:1
position: 506203
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 22
SIO_000628: feature:506284-506381:1:exon

position:506284:1
position: 506284
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:506381:1
position: 506381
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 23
SIO_000628: feature:507210-507297:1:exon

position:507210:1
position: 507210
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:507297:1
position: 507297
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 24
SIO_000628: feature:507382-507464:1:exon

position:507382:1
position: 507382
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:507464:1
position: 507464
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 25
SIO_000628: feature:507638-507718:1:exon

position:507638:1
position: 507638
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:507718:1
position: 507718
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 26
SIO_000628: feature:507813-507906:1:exon

position:507813:1
position: 507813
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:507906:1
position: 507906
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 27
SIO_000628: feature:507987-508103:1:exon

position:507987:1
position: 507987
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:508103:1
position: 508103
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 28
SIO_000628: feature:508646-508755:1:exon

position:508646:1
position: 508646
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:508755:1
position: 508755
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 29
SIO_000628: feature:509128-509217:1:exon

position:509128:1
position: 509128
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:509217:1
position: 509217
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 30
SIO_000628: feature:509682-509811:1:exon

position:509682:1
position: 509682
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

NCKAP1L
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 87175
gene: NCKAP1L
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: nck-associated protein 1-like
translation: MSLPSVYGDKLAEKLTLLNERGRGVLVRVYNLKKTCSDPRTRPPFLGDKAMEASAKFILKKFPHLDVRSSTQHLGPVHRDRGDIVRVLAPFYQTLLDVLEFRDHVYELLNTIDASQCFFDIHINYDFTKGYLDLVVTYVSLVLLLARAEERRLLLGLYQCAHEMSHGASEPGFPRLAQMVLEYEHPLKKLPEEFGPHTKMACEYLSLEVMERWIILGFLVCPGVRAWGPCQERGAPPAGPLFVTLVRDEAVAVHKVTEELLGGLKGYGKRVADVKECREHAVAHRSGGWGARRRPLAPLLLRGAGSELAALLEDQPGLLGPKALLVFVALSLCRDEVSWLSRHAEHVTKSKNPEDFSDSRIAELLFLLEQLRALVRRHLRLLRRYHRQYLARFDALVLSDVIQNLSVCPEEESVILSSFVSSLSALAAKEVDDQEQFDFTALRLDWFRLQAYTSVAKAALPLSSNGDVGRAMSLVVFHTRLLDRPEELLDETSDLSHLCFYPRPLERMFALTLDEPSMLRFAIAFPLLCAHFSRCQHPMCPEEYPQLEAAALGLCHKFLEELARVGSGCVLDACAEQHNLSQQLLPKHCAATISRARVKKTPKQPPRKGDPQRDKPGTESQRRDRTLTTNMDKLHLTLAELSLSLNHVPNFTVFGHTVTPAEYLSSHLETRLTKAIVAMAGYSQASQEVARPSEVLAGLVAYMGLVQRLGHLVALDTARLLRAVLLQQSHPRDGSGQPTLTAIYTDWYLEALLRQASTGAVLLSPALQAFTTVPREEQPPFSAAEFSDVSEMRALAELIGPYGMRFLSENLMWHVGSQVTELKKLVVENMDTLVQLRCCRAEQRPALLPRLSSAENVLKRMTIIGEILNFRAMAQQGLREVFSQHCPFLMGPIECLADVVTPDTDIQVTLSIFELASAAGVPCEVDPALVAALAGHRTEGSSPEEDYKVSCLLLVFVAVSLPLLAADPASLYNPELDGHNNNVHCLAKAIVQLSAALFTVHSKNIETHLKEFLLLASSSLLQLAQEPDKARLRNQDSIVLLLHLIVAESSFLTLDMLESCFPYVLLRNAFRQVCREPPGRAPPH
SIO_010081: NCKAP1L
subclass of: SO_0000673
so part of: NCKAP1L
location: join(495301..495402,495848..495958,496322..496414,496821..496877,496957..497099,497556..497646,498525..498573,499090..499240,499772..499845,500711..500805,501110..501219,501600..501732,501813..501894,502126..502184,502684..502829,503270..503402,503480..503599,504124..504263,504601..504732,505209..505427,506073..506203,506284..506381,507210..507297,507382..507464,507638..507718,507813..507906,507987..508103,508646..508755,509128..509217,509682..509804)
location: region:495301-509804:1
so has part: feature:495301-495402:1:exon
so has part: feature:495848-495958:1:exon
so has part: feature:496322-496414:1:exon
so has part: feature:496821-496877:1:exon
so has part: feature:496957-497099:1:exon
so has part: feature:497556-497646:1:exon
so has part: feature:498525-498573:1:exon
so has part: feature:499090-499240:1:exon
so has part: feature:499772-499845:1:exon
so has part: feature:500711-500805:1:exon
so has part: feature:501110-501219:1:exon
so has part: feature:501600-501732:1:exon
so has part: feature:501813-501894:1:exon
so has part: feature:502126-502184:1:exon
so has part: feature:502684-502829:1:exon
so has part: feature:503270-503402:1:exon
so has part: feature:503480-503599:1:exon
so has part: feature:504124-504263:1:exon
so has part: feature:504601-504732:1:exon
so has part: feature:505209-505427:1:exon
so has part: feature:506073-506203:1:exon
so has part: feature:506284-506381:1:exon
so has part: feature:507210-507297:1:exon
so has part: feature:507382-507464:1:exon
so has part: feature:507638-507718:1:exon
so has part: feature:507813-507906:1:exon
so has part: feature:507987-508103:1:exon
so has part: feature:508646-508755:1:exon
so has part: feature:509128-509217:1:exon
so has part: feature:509682-509804:1:exon

XP_030822842.1
type: Protein
SIO_000068: ncbiprotein

position:495301:1
position: 495301
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:509804:1
position: 509804
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:495301-495402:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:495848-495958:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:496322-496414:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:496821-496877:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:496957-497099:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:497556-497646:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:498525-498573:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:499090-499240:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:499772-499845:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:500711-500805:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:501110-501219:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:501600-501732:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:501813-501894:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:502126-502184:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:502684-502829:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:503270-503402:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:503480-503599:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:504124-504263:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:504601-504732:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:505209-505427:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:506073-506203:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:506284-506381:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:507210-507297:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:507382-507464:1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:507638-507718:1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:507813-507906:1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:507987-508103:1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:508646-508755:1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:509128-509217:1:exon

urn:…
SIO_000300: 30
SIO_000628: feature:509682-509804:1:exon

PDE1B
type: Gene
subclass of: SO_0000704
RO_0002162: 87175
gene: PDE1B
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 513554..524138
location: region:513554-524138:1
so has part: feature:513554-524138:1:exon
subclass of: SO_0000010

115914587
type: Gene
SIO_000068: ncbigene

position:513554:1
position: 513554
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:524138:1
position: 524138
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:513554-524138:1:exon

PDE1B
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 87175
gene: PDE1B
product: phosphodiesterase 1B, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 26 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_030967188.1
SIO_010081: PDE1B
subclass of: SO_0000673
so part of: PDE1B
location: join(513554..513693,516604..516717,517811..517996,518432..518498,519263..519379,519956..520096,520495..520595,521169..521294,521386..521487,521573..521693,521768..521849,521949..522075,522161..522291,522671..522778,522914..524138)
location: region:513554-524138:1
so has part: feature:513554-513693:1:exon
so has part: feature:516604-516717:1:exon
so has part: feature:517811-517996:1:exon
so has part: feature:518432-518498:1:exon
so has part: feature:519263-519379:1:exon
so has part: feature:519956-520096:1:exon
so has part: feature:520495-520595:1:exon
so has part: feature:521169-521294:1:exon
so has part: feature:521386-521487:1:exon
so has part: feature:521573-521693:1:exon
so has part: feature:521768-521849:1:exon
so has part: feature:521949-522075:1:exon
so has part: feature:522161-522291:1:exon
so has part: feature:522671-522778:1:exon
so has part: feature:522914-524138:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:513554-513693:1:exon

position:513693:1
position: 513693
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:516604-516717:1:exon

position:516604:1
position: 516604
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:516717:1
position: 516717
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:517811-517996:1:exon

position:517811:1
position: 517811
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:517996:1
position: 517996
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:518432-518498:1:exon

position:518432:1
position: 518432
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:518498:1
position: 518498
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:519263-519379:1:exon

position:519263:1
position: 519263
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:519379:1
position: 519379
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:519956-520096:1:exon

position:519956:1
position: 519956
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:520096:1
position: 520096
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:520495-520595:1:exon

position:520495:1
position: 520495
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:520595:1
position: 520595
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:521169-521294:1:exon

position:521169:1
position: 521169
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:521294:1
position: 521294
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:521386-521487:1:exon

position:521386:1
position: 521386
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:521487:1
position: 521487
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:521573-521693:1:exon

position:521573:1
position: 521573
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:521693:1
position: 521693
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:521768-521849:1:exon

position:521768:1
position: 521768
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:521849:1
position: 521849
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:521949-522075:1:exon

position:521949:1
position: 521949
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:522075:1
position: 522075
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:522161-522291:1:exon

position:522161:1
position: 522161
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:522291:1
position: 522291
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:522671-522778:1:exon

position:522671:1
position: 522671
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:522778:1
position: 522778
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:522914-524138:1:exon

position:522914:1
position: 522914
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

PDE1B
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 87175
gene: PDE1B
product: phosphodiesterase 1B, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 36 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_030967187.1
SIO_010081: PDE1B
subclass of: SO_0000673
so part of: PDE1B
location: join(513595..513693,514284..514419,516604..516717,517811..517996,518432..518498,519263..519379,519956..520096,520495..520595,521169..521294,521386..521487,521573..521693,521768..521849,521949..522075,522161..522291,522671..522778,522911..524138)
location: region:513595-524138:1
so has part: feature:513595-513693:1:exon
so has part: feature:514284-514419:1:exon
so has part: feature:516604-516717:1:exon
so has part: feature:517811-517996:1:exon
so has part: feature:518432-518498:1:exon
so has part: feature:519263-519379:1:exon
so has part: feature:519956-520096:1:exon
so has part: feature:520495-520595:1:exon
so has part: feature:521169-521294:1:exon
so has part: feature:521386-521487:1:exon
so has part: feature:521573-521693:1:exon
so has part: feature:521768-521849:1:exon
so has part: feature:521949-522075:1:exon
so has part: feature:522161-522291:1:exon
so has part: feature:522671-522778:1:exon
so has part: feature:522911-524138:1:exon

position:513595:1
position: 513595
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:513595-513693:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:514284-514419:1:exon

position:514284:1
position: 514284
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:514419:1
position: 514419
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:516604-516717:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:517811-517996:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:518432-518498:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:519263-519379:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:519956-520096:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:520495-520595:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:521169-521294:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:521386-521487:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:521573-521693:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:521768-521849:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:521949-522075:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:522161-522291:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:522671-522778:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:522911-524138:1:exon

position:522911:1
position: 522911
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

PDE1B
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 87175
gene: PDE1B
product: phosphodiesterase 1B, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 36 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_030967186.1
SIO_010081: PDE1B
subclass of: SO_0000673
so part of: PDE1B
location: join(513595..513693,514284..514419,516604..516717,517811..517996,518432..518498,519263..519379,519956..520096,520495..520595,521169..521294,521386..521487,521573..521693,521768..521849,521949..522075,522161..522291,522671..522778,522914..524138)
location: region:513595-524138:1
so has part: feature:513595-513693:1:exon
so has part: feature:514284-514419:1:exon
so has part: feature:516604-516717:1:exon
so has part: feature:517811-517996:1:exon
so has part: feature:518432-518498:1:exon
so has part: feature:519263-519379:1:exon
so has part: feature:519956-520096:1:exon
so has part: feature:520495-520595:1:exon
so has part: feature:521169-521294:1:exon
so has part: feature:521386-521487:1:exon
so has part: feature:521573-521693:1:exon
so has part: feature:521768-521849:1:exon
so has part: feature:521949-522075:1:exon
so has part: feature:522161-522291:1:exon
so has part: feature:522671-522778:1:exon
so has part: feature:522914-524138:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:513595-513693:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:514284-514419:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:516604-516717:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:517811-517996:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:518432-518498:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:519263-519379:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:519956-520096:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:520495-520595:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:521169-521294:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:521386-521487:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:521573-521693:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:521768-521849:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:521949-522075:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:522161-522291:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:522671-522778:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:522914-524138:1:exon

PDE1B
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 87175
gene: PDE1B
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: calcium/calmodulin-dependent 3',5'-cyclic nucleotide phosphodiesterase 1B isoform X1
translation: MEPPRSLPGLERERPALDAAGGCPSPLDARAVPGRKVWVKLRALLRFLVKQLEAGEVSVEELKRNLEYAASLLEAVCIDETRQVLDTEDELRAMGSDAAVPSEVRDWLAATFTQQARAKGRRAEEKPKFRSIVHAVQAGIFVERMFRRTYTAVGPSYSSSVLNCLKGLDQWCFDVFSLHRAAEEHSLRTVVFELFTRHNLNSRFKIPGAFLTSLLEALEGGYGKFRNPYHNQVHAADVTQTVHCFLLRTGMLHCLSEIELLAIVFAAAIHDFEHTGTTNSFHIQTKSDTAILYNDRSVLENHHISAVFRLMQDEELNIFVNLTKDEFAELRALVIEMVLATDMSCHFQQVKSMKTALQQLERLDKSKVLSLLLHAADISHPTKQWAVHSRWTKALMEEFFRQGDKEAELGLPFSPLCDRTSTLVAQSQIGFIDFIVEPTFSVLTDVAEKLVTPPAEDGSKAKGNPTATQQPSSQWRQPSLDEHLEDIKADLAGFRSTWTKHIQENKQKWKERAASGITNQASIDELSPCEEPAATGTHSENGDVE
SIO_010081: PDE1B
subclass of: SO_0000673
so part of: PDE1B
location: join(514289..514419,516604..516717,517811..517996,518432..518498,519263..519379,519956..520096,520495..520595,521169..521294,521386..521487,521573..521693,521768..521849,521949..522075,522161..522291,522671..522762)
location: region:514289-522762:1
so has part: feature:514289-514419:1:exon
so has part: feature:516604-516717:1:exon
so has part: feature:517811-517996:1:exon
so has part: feature:518432-518498:1:exon
so has part: feature:519263-519379:1:exon
so has part: feature:519956-520096:1:exon
so has part: feature:520495-520595:1:exon
so has part: feature:521169-521294:1:exon
so has part: feature:521386-521487:1:exon
so has part: feature:521573-521693:1:exon
so has part: feature:521768-521849:1:exon
so has part: feature:521949-522075:1:exon
so has part: feature:522161-522291:1:exon
so has part: feature:522671-522762:1:exon

XP_030823046.1
type: Protein
SIO_000068: ncbiprotein

position:514289:1
position: 514289
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:522762:1
position: 522762
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:514289-514419:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:516604-516717:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:517811-517996:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:518432-518498:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:519263-519379:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:519956-520096:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:520495-520595:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:521169-521294:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:521386-521487:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:521573-521693:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:521768-521849:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:521949-522075:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:522161-522291:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:522671-522762:1:exon

PDE1B
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 87175
gene: PDE1B
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: calcium/calmodulin-dependent 3',5'-cyclic nucleotide phosphodiesterase 1B isoform X1
translation: MEPPRSLPGLERERPALDAAGGCPSPLDARAVPGRKVWVKLRALLRFLVKQLEAGEVSVEELKRNLEYAASLLEAVCIDETRQVLDTEDELRAMGSDAAVPSEVRDWLAATFTQQARAKGRRAEEKPKFRSIVHAVQAGIFVERMFRRTYTAVGPSYSSSVLNCLKGLDQWCFDVFSLHRAAEEHSLRTVVFELFTRHNLNSRFKIPGAFLTSLLEALEGGYGKFRNPYHNQVHAADVTQTVHCFLLRTGMLHCLSEIELLAIVFAAAIHDFEHTGTTNSFHIQTKSDTAILYNDRSVLENHHISAVFRLMQDEELNIFVNLTKDEFAELRALVIEMVLATDMSCHFQQVKSMKTALQQLERLDKSKVLSLLLHAADISHPTKQWAVHSRWTKALMEEFFRQGDKEAELGLPFSPLCDRTSTLVAQSQIGFIDFIVEPTFSVLTDVAEKLVTPPAEDGSKAKGNPTATQQPSSQWRQPSLDEHLEDIKADLAGFRSTWTKHIQENKQKWKERAASGITNQASIDELSPCEEPAATGTHSENGDVE
SIO_010081: PDE1B
subclass of: SO_0000673
so part of: PDE1B
location: join(514289..514419,516604..516717,517811..517996,518432..518498,519263..519379,519956..520096,520495..520595,521169..521294,521386..521487,521573..521693,521768..521849,521949..522075,522161..522291,522671..522762)
location: region:514289-522762:1
so has part: feature:514289-514419:1:exon
so has part: feature:516604-516717:1:exon
so has part: feature:517811-517996:1:exon
so has part: feature:518432-518498:1:exon
so has part: feature:519263-519379:1:exon
so has part: feature:519956-520096:1:exon
so has part: feature:520495-520595:1:exon
so has part: feature:521169-521294:1:exon
so has part: feature:521386-521487:1:exon
so has part: feature:521573-521693:1:exon
so has part: feature:521768-521849:1:exon
so has part: feature:521949-522075:1:exon
so has part: feature:522161-522291:1:exon
so has part: feature:522671-522762:1:exon

XP_030823047.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:514289-514419:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:516604-516717:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:517811-517996:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:518432-518498:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:519263-519379:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:519956-520096:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:520495-520595:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:521169-521294:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:521386-521487:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:521573-521693:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:521768-521849:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:521949-522075:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:522161-522291:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:522671-522762:1:exon

PDE1B
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 87175
gene: PDE1B
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: calcium/calmodulin-dependent 3',5'-cyclic nucleotide phosphodiesterase 1B isoform X2
translation: MGSDAAVPSEVRDWLAATFTQQARAKGRRAEEKPKFRSIVHAVQAGIFVERMFRRTYTAVGPSYSSSVLNCLKGLDQWCFDVFSLHRAAEEHSLRTVVFELFTRHNLNSRFKIPGAFLTSLLEALEGGYGKFRNPYHNQVHAADVTQTVHCFLLRTGMLHCLSEIELLAIVFAAAIHDFEHTGTTNSFHIQTKSDTAILYNDRSVLENHHISAVFRLMQDEELNIFVNLTKDEFAELRALVIEMVLATDMSCHFQQVKSMKTALQQLERLDKSKVLSLLLHAADISHPTKQWAVHSRWTKALMEEFFRQGDKEAELGLPFSPLCDRTSTLVAQSQIGFIDFIVEPTFSVLTDVAEKLVTPPAEDGSKAKGNPTATQQPSSQWRQPSLDEHLEDIKADLAGFRSTWTKHIQENKQKWKERAASGITNQASIDELSPCEEPAATGTHSENGDVE
SIO_010081: PDE1B
subclass of: SO_0000673
so part of: PDE1B
location: join(517845..517996,518432..518498,519263..519379,519956..520096,520495..520595,521169..521294,521386..521487,521573..521693,521768..521849,521949..522075,522161..522291,522671..522762)
location: region:517845-522762:1
so has part: feature:517845-517996:1:exon
so has part: feature:518432-518498:1:exon
so has part: feature:519263-519379:1:exon
so has part: feature:519956-520096:1:exon
so has part: feature:520495-520595:1:exon
so has part: feature:521169-521294:1:exon
so has part: feature:521386-521487:1:exon
so has part: feature:521573-521693:1:exon
so has part: feature:521768-521849:1:exon
so has part: feature:521949-522075:1:exon
so has part: feature:522161-522291:1:exon
so has part: feature:522671-522762:1:exon

XP_030823048.1
type: Protein
SIO_000068: ncbiprotein

position:517845:1
position: 517845
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:517845-517996:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:518432-518498:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:519263-519379:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:519956-520096:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:520495-520595:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:521169-521294:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:521386-521487:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:521573-521693:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:521768-521849:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:521949-522075:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:522161-522291:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:522671-522762:1:exon

PPP1R1A
type: Gene
subclass of: SO_0000704
RO_0002162: 87175
gene: PPP1R1A
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(524968..530244)
location: region:524968-530244:-1
so has part: feature:524968-530244:-1:exon
subclass of: SO_0000010

115914600
type: Gene
SIO_000068: ncbigene

position:524968:-1
position: 524968
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:530244:-1
position: 530244
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:524968-530244:-1:exon

PPP1R1A
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 87175
gene: PPP1R1A
product: protein phosphatase 1 regulatory inhibitor subunit 1A, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_030967208.1
SIO_010081: PPP1R1A
subclass of: SO_0000673
so part of: PPP1R1A
location: complement(join(524968..525388,525867..525994,526072..526180,526619..526682,526775..526812,527244..527304,530121..530244))
location: region:524968-530244:-1
so has part: feature:530121-530244:-1:exon
so has part: feature:527244-527304:-1:exon
so has part: feature:526775-526812:-1:exon
so has part: feature:526619-526682:-1:exon
so has part: feature:526072-526180:-1:exon
so has part: feature:525867-525994:-1:exon
so has part: feature:524968-525388:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:530121-530244:-1:exon

position:530121:-1
position: 530121
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:527244-527304:-1:exon

position:527244:-1
position: 527244
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:527304:-1
position: 527304
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:526775-526812:-1:exon

position:526775:-1
position: 526775
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:526812:-1
position: 526812
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:526619-526682:-1:exon

position:526619:-1
position: 526619
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:526682:-1
position: 526682
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:526072-526180:-1:exon

position:526072:-1
position: 526072
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:526180:-1
position: 526180
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:525867-525994:-1:exon

position:525867:-1
position: 525867
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:525994:-1
position: 525994
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:524968-525388:-1:exon

position:525388:-1
position: 525388
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

PPP1R1A
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 87175
gene: PPP1R1A
product: protein phosphatase 1 regulatory inhibitor subunit 1A, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 13 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_030967207.1
SIO_010081: PPP1R1A
subclass of: SO_0000673
so part of: PPP1R1A
location: complement(join(524968..525388,525867..525994,526072..526218,526619..526682,526775..526812,527244..527304,530121..530244))
location: region:524968-530244:-1
so has part: feature:530121-530244:-1:exon
so has part: feature:527244-527304:-1:exon
so has part: feature:526775-526812:-1:exon
so has part: feature:526619-526682:-1:exon
so has part: feature:526072-526218:-1:exon
so has part: feature:525867-525994:-1:exon
so has part: feature:524968-525388:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:530121-530244:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:527244-527304:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:526775-526812:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:526619-526682:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:526072-526218:-1:exon

position:526218:-1
position: 526218
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:525867-525994:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:524968-525388:-1:exon

PPP1R1A
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 87175
gene: PPP1R1A
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protein phosphatase 1 regulatory subunit 1A isoform X1
translation: MEPNSPRKIQFTVPLLEPHLDPEAAEQIRRRRPTPANLVLSSDQSSPEIDEDRLPNPLLKSGLAMSPRQRKKVSRSTPTMKELQMMVEHHLCKQAQGGDDDEEVAATARCQRGDTEPEHRHSPGAAPGSHRTPGDGTPQAGTPRAGTPGAVRRSRAEDGTHIEPGDSAGSGH
SIO_010081: PPP1R1A
subclass of: SO_0000673
so part of: PPP1R1A
location: complement(join(525867..525994,526072..526218,526619..526682,526775..526812,527244..527304,530121..530201))
location: region:525867-530201:-1
so has part: feature:530121-530201:-1:exon
so has part: feature:527244-527304:-1:exon
so has part: feature:526775-526812:-1:exon
so has part: feature:526619-526682:-1:exon
so has part: feature:526072-526218:-1:exon
so has part: feature:525867-525994:-1:exon

XP_030823067.1
type: Protein
SIO_000068: ncbiprotein

position:530201:-1
position: 530201
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:530121-530201:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:527244-527304:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:526775-526812:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:526619-526682:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:526072-526218:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:525867-525994:-1:exon

PPP1R1A
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 87175
gene: PPP1R1A
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protein phosphatase 1 regulatory subunit 1A isoform X2
translation: MEPNSPRKIQFTVPLLEPHLDPEAAEQIRRRRPTPANLVLSSDQSSPEIDEDRLPNPLLKSGLAMSPRQRKKVSRSTPTMKGAGRRRRRRGGGHRPLPARRHRARAPAQPRRGPGQPPDPRGWDTPSGDTPGRDPRGRAAQPG
SIO_010081: PPP1R1A
subclass of: SO_0000673
so part of: PPP1R1A
location: complement(join(525916..525994,526072..526180,526619..526682,526775..526812,527244..527304,530121..530201))
location: region:525916-530201:-1
so has part: feature:530121-530201:-1:exon
so has part: feature:527244-527304:-1:exon
so has part: feature:526775-526812:-1:exon
so has part: feature:526619-526682:-1:exon
so has part: feature:526072-526180:-1:exon
so has part: feature:525916-525994:-1:exon

XP_030823068.1
type: Protein
SIO_000068: ncbiprotein

position:525916:-1
position: 525916
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:530121-530201:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:527244-527304:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:526775-526812:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:526619-526682:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:526072-526180:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:525916-525994:-1:exon

TESPA1
type: Gene
subclass of: SO_0000704
RO_0002162: 87175
gene: TESPA1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 534024..536548
location: region:534024-536548:1
so has part: feature:534024-536548:1:exon
subclass of: SO_0000010

115914457
type: Gene
SIO_000068: ncbigene

position:534024:1
position: 534024
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:536548:1
position: 536548
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:534024-536548:1:exon

TESPA1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 87175
gene: TESPA1
product: thymocyte expressed, positive selection associated 1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 95% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_030966983.1
SIO_010081: TESPA1
subclass of: SO_0000673
so part of: TESPA1
location: join(534024..534204,534310..534352,534790..534830,534918..534971,535182..535218,535324..535473,535586..535794,536043..536548)
location: region:534024-536548:1
so has part: feature:534024-534204:1:exon
so has part: feature:534310-534352:1:exon
so has part: feature:534790-534830:1:exon
so has part: feature:534918-534971:1:exon
so has part: feature:535182-535218:1:exon
so has part: feature:535324-535473:1:exon
so has part: feature:535586-535794:1:exon
so has part: feature:536043-536548:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:534024-534204:1:exon

position:534204:1
position: 534204
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:534310-534352:1:exon

position:534310:1
position: 534310
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:534352:1
position: 534352
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:534790-534830:1:exon

position:534790:1
position: 534790
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:534830:1
position: 534830
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:534918-534971:1:exon

position:534918:1
position: 534918
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:534971:1
position: 534971
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:535182-535218:1:exon

position:535182:1
position: 535182
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:535218:1
position: 535218
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:535324-535473:1:exon

position:535324:1
position: 535324
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:535473:1
position: 535473
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:535586-535794:1:exon

position:535586:1
position: 535586
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:535794:1
position: 535794
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:536043-536548:1:exon

position:536043:1
position: 536043
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

TESPA1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 87175
gene: TESPA1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protein TESPA1
translation: MEGPSVLGPSWRQSRGWRSPEGEREQEEEEEEEEEEEEEEEQEAAAVAWEPPEPHRAVLEGGLCCRVRPWLRDCGAAPLDEPGSPGPCGCGSSGTSLEDELGLAAEAVLLPGSPQAAGRSQWDRRVKPGDSAASSVPCSVPCSVPSSVPSGVPSSVPCSVPCGVPSSSSLPAVLAWWHSDAEEILHSLGFVGSDPGVASRVPPRFFSGPSRASGIDLGLFLRAQARRLQLEDPCLLLASRFQQVQALAATADAFFCLYSHVSRTPLQRLAPPRPCRDIPDSAGERLKRAVSSLCLYTGRGHSGDTTRGATPGPDGTP
SIO_010081: TESPA1
subclass of: SO_0000673
so part of: TESPA1
location: join(534024..534204,534310..534352,534790..534830,534918..534971,535182..535218,535324..535473,535586..535794,536043..536281)
location: region:534024-536281:1
so has part: feature:534024-534204:1:exon
so has part: feature:534310-534352:1:exon
so has part: feature:534790-534830:1:exon
so has part: feature:534918-534971:1:exon
so has part: feature:535182-535218:1:exon
so has part: feature:535324-535473:1:exon
so has part: feature:535586-535794:1:exon
so has part: feature:536043-536281:1:exon

XP_030822843.1
type: Protein
SIO_000068: ncbiprotein

position:536281:1
position: 536281
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:534024-534204:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:534310-534352:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:534790-534830:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:534918-534971:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:535182-535218:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:535324-535473:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:535586-535794:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:536043-536281:1:exon

NEUROD4
type: Gene
subclass of: SO_0000704
RO_0002162: 87175
gene: NEUROD4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 550292..552871
location: region:550292-552871:1
so has part: feature:550292-552871:1:exon
subclass of: SO_0000010

115914597
type: Gene
SIO_000068: ncbigene

position:550292:1
position: 550292
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:552871:1
position: 552871
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:550292-552871:1:exon

NEUROD4
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 87175
gene: NEUROD4
product: neuronal differentiation 4
exception: unclassified transcription discrepancy
note: The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: deleted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 19 Proteins, and 98% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_030967205.1
SIO_010081: NEUROD4
subclass of: SO_0000673
so part of: NEUROD4
location: join(550292..550432,551746..552871)
location: region:550292-552871:1
so has part: feature:550292-550432:1:exon
so has part: feature:551746-552871:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:550292-550432:1:exon

position:550432:1
position: 550432
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:551746-552871:1:exon

position:551746:1
position: 551746
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

NEUROD4
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 87175
gene: NEUROD4
exception: unclassified translation discrepancy
note: The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: deleted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: LOW QUALITY PROTEIN: neurogenic differentiation factor 4
translation: MPQSCAKPSDMAELVSSQAWMGEMPAAKAELKEQGDARSAPFALLPALPEERDSAEEEEEEEEEEGEKPKRRGPKKKKMTKARLERFRARRVKANARERTRMHGLNDALDNLRRVMPCYSKTQKLSKIETLRLARNYIWALSEVLETGQTPEGKSFVEMLCKGLSQPTSNLVAGCLQLGPQPLFLEKREEKPCEPGLAGHSFGYQGLPSPPYGSMESHLLHLKPPAFKSLVEASFGSHPSDCSTPPYEGPLTPPLSISGNFSLKQDGSPELDKSYPFMAHYPSVGLAAAHGHGSHFQGSVPRYEIPLDVTFESFPPHVAGAQLGAIFNE
SIO_010081: NEUROD4
subclass of: SO_0000673
so part of: NEUROD4
location: 551746..552736
location: region:551746-552736:1
so has part: feature:551746-552736:1:exon

XP_030823065.1
type: Protein
SIO_000068: ncbiprotein

position:552736:1
position: 552736
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:551746-552736:1:exon

ENDOU
type: Gene
subclass of: SO_0000704
RO_0002162: 87175
gene: ENDOU
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(563129..571367)
location: region:563129-571367:-1
so has part: feature:563129-571367:-1:exon
subclass of: SO_0000010

115914596
type: Gene
SIO_000068: ncbigene

position:563129:-1
position: 563129
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:571367:-1
position: 571367
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:563129-571367:-1:exon

ENDOU
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 87175
gene: ENDOU
product: endonuclease, poly(U) specific
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins, and 73% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_030967204.1
SIO_010081: ENDOU
subclass of: SO_0000673
so part of: ENDOU
location: complement(join(563129..563298,563831..563973,564264..564370,564465..564578,565828..566027,566102..566273,566858..566992,571263..571367))
location: region:563129-571367:-1
so has part: feature:571263-571367:-1:exon
so has part: feature:566858-566992:-1:exon
so has part: feature:566102-566273:-1:exon
so has part: feature:565828-566027:-1:exon
so has part: feature:564465-564578:-1:exon
so has part: feature:564264-564370:-1:exon
so has part: feature:563831-563973:-1:exon
so has part: feature:563129-563298:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:571263-571367:-1:exon

position:571263:-1
position: 571263
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:566858-566992:-1:exon

position:566858:-1
position: 566858
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:566992:-1
position: 566992
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:566102-566273:-1:exon

position:566102:-1
position: 566102
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:566273:-1
position: 566273
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:565828-566027:-1:exon

position:565828:-1
position: 565828
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:566027:-1
position: 566027
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:564465-564578:-1:exon

position:564465:-1
position: 564465
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:564578:-1
position: 564578
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:564264-564370:-1:exon

position:564264:-1
position: 564264
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:564370:-1
position: 564370
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:563831-563973:-1:exon

position:563831:-1
position: 563831
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:563973:-1
position: 563973
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:563129-563298:-1:exon

position:563298:-1
position: 563298
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

ENDOU
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 87175
gene: ENDOU
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: poly(U)-specific endoribonuclease
translation: MELWMLLLGAGIALGCVSGHLYTAPDSCEGRCGEPFNEEDECHCHPGCEAEHNCCEDHERHCGPDGFSSSSGSISEQELLELSEQLYGLDHNKARPSDIALNPQHLAGPDETGDKQDRSPQPLYKYVNEELFSKPTYASFIKLLDNYQRATGREEEVTAEELREQERFLEEVMKTELMKKLFVFLQGKDRYSSEQEFLQDLNQMWFGLYSRGDGQRDSSGFEHVFSGEVKKGKVSGFHNWIRFYLLEKQGVLNYFSHNFDGPWDSYPDVLGLQFSWDGFYKEVGSAFIGCSPEFEFGLYTLCFLARPGRACHLSLGGHRLSVQTYPWTKATYGGGRRFIATAYVMSP
SIO_010081: ENDOU
subclass of: SO_0000673
so part of: ENDOU
location: complement(join(563184..563298,563831..563973,564264..564370,564465..564578,565828..566027,566102..566273,566858..566992,571263..571320))
location: region:563184-571320:-1
so has part: feature:571263-571320:-1:exon
so has part: feature:566858-566992:-1:exon
so has part: feature:566102-566273:-1:exon
so has part: feature:565828-566027:-1:exon
so has part: feature:564465-564578:-1:exon
so has part: feature:564264-564370:-1:exon
so has part: feature:563831-563973:-1:exon
so has part: feature:563184-563298:-1:exon

XP_030823064.1
type: Protein
SIO_000068: ncbiprotein

position:563184:-1
position: 563184
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:571320:-1
position: 571320
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:571263-571320:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:566858-566992:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:566102-566273:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:565828-566027:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:564465-564578:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:564264-564370:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:563831-563973:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:563184-563298:-1:exon

RAPGEF3
type: Gene
subclass of: SO_0000704
RO_0002162: 87175
gene: RAPGEF3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(573451..584518)
location: region:573451-584518:-1
so has part: feature:573451-584518:-1:exon
subclass of: SO_0000010

115914582
type: Gene
SIO_000068: ncbigene

position:573451:-1
position: 573451
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:584518:-1
position: 584518
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:573451-584518:-1:exon

RAPGEF3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 87175
gene: RAPGEF3
product: Rap guanine nucleotide exchange factor 3
exception: unclassified transcription discrepancy
note: The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: inserted 2 bases in 1 codon; deleted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins, and 97% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
transcript id: XM_030967174.1
SIO_010081: RAPGEF3
subclass of: SO_0000673
so part of: RAPGEF3
location: complement(join(573451..573615,574031..574102,574300..574354,574508..574572,574653..574740,574935..574985,575172..575262,575340..575522,575679..575804,575943..576040,576131..576277,576373..576454,576573..576612,576947..577029,577115..577263,577460..577538,578115..578206,578407..578516,578589..578735,578816..578892,579004..579064,579300..579384,579558..579732,579806..579927,580001..580107,580318..580371,584365..584518))
location: region:573451-584518:-1
so has part: feature:584365-584518:-1:exon
so has part: feature:580318-580371:-1:exon
so has part: feature:580001-580107:-1:exon
so has part: feature:579806-579927:-1:exon
so has part: feature:579558-579732:-1:exon
so has part: feature:579300-579384:-1:exon
so has part: feature:579004-579064:-1:exon
so has part: feature:578816-578892:-1:exon
so has part: feature:578589-578735:-1:exon
so has part: feature:578407-578516:-1:exon
so has part: feature:578115-578206:-1:exon
so has part: feature:577460-577538:-1:exon
so has part: feature:577115-577263:-1:exon
so has part: feature:576947-577029:-1:exon
so has part: feature:576573-576612:-1:exon
so has part: feature:576373-576454:-1:exon
so has part: feature:576131-576277:-1:exon
so has part: feature:575943-576040:-1:exon
so has part: feature:575679-575804:-1:exon
so has part: feature:575340-575522:-1:exon
so has part: feature:575172-575262:-1:exon
so has part: feature:574935-574985:-1:exon
so has part: feature:574653-574740:-1:exon
so has part: feature:574508-574572:-1:exon
so has part: feature:574300-574354:-1:exon
so has part: feature:574031-574102:-1:exon
so has part: feature:573451-573615:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:584365-584518:-1:exon

position:584365:-1
position: 584365
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:580318-580371:-1:exon

position:580318:-1
position: 580318
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:580371:-1
position: 580371
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:580001-580107:-1:exon

position:580001:-1
position: 580001
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:580107:-1
position: 580107
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:579806-579927:-1:exon

position:579806:-1
position: 579806
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:579927:-1
position: 579927
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:579558-579732:-1:exon

position:579558:-1
position: 579558
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:579732:-1
position: 579732
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:579300-579384:-1:exon

position:579300:-1
position: 579300
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:579384:-1
position: 579384
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:579004-579064:-1:exon

position:579004:-1
position: 579004
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:579064:-1
position: 579064
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:578816-578892:-1:exon

position:578816:-1
position: 578816
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:578892:-1
position: 578892
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:578589-578735:-1:exon

position:578589:-1
position: 578589
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:578735:-1
position: 578735
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:578407-578516:-1:exon

position:578407:-1
position: 578407
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:578516:-1
position: 578516
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:578115-578206:-1:exon

position:578115:-1
position: 578115
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:578206:-1
position: 578206
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:577460-577538:-1:exon

position:577460:-1
position: 577460
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:577538:-1
position: 577538
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:577115-577263:-1:exon

position:577115:-1
position: 577115
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:577263:-1
position: 577263
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:576947-577029:-1:exon

position:576947:-1
position: 576947
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:577029:-1
position: 577029
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:576573-576612:-1:exon

position:576573:-1
position: 576573
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:576612:-1
position: 576612
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:576373-576454:-1:exon

position:576373:-1
position: 576373
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:576454:-1
position: 576454
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:576131-576277:-1:exon

position:576131:-1
position: 576131
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:576277:-1
position: 576277
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:575943-576040:-1:exon

position:575943:-1
position: 575943
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:576040:-1
position: 576040
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:575679-575804:-1:exon

position:575679:-1
position: 575679
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:575804:-1
position: 575804
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:575340-575522:-1:exon

position:575340:-1
position: 575340
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:575522:-1
position: 575522
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:575172-575262:-1:exon

position:575172:-1
position: 575172
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:575262:-1
position: 575262
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 22
SIO_000628: feature:574935-574985:-1:exon

position:574935:-1
position: 574935
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:574985:-1
position: 574985
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 23
SIO_000628: feature:574653-574740:-1:exon

position:574653:-1
position: 574653
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:574740:-1
position: 574740
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 24
SIO_000628: feature:574508-574572:-1:exon

position:574508:-1
position: 574508
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:574572:-1
position: 574572
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 25
SIO_000628: feature:574300-574354:-1:exon

position:574300:-1
position: 574300
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:574354:-1
position: 574354
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 26
SIO_000628: feature:574031-574102:-1:exon

position:574031:-1
position: 574031
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:574102:-1
position: 574102
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 27
SIO_000628: feature:573451-573615:-1:exon

position:573615:-1
position: 573615
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

RAPGEF3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 87175
gene: RAPGEF3
exception: unclassified translation discrepancy
note: The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: inserted 2 bases in 1 codon; deleted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: LOW QUALITY PROTEIN: rap guanine nucleotide exchange factor 3
translation: MHLFRSSSYDVRLEGAGGSLPRIKGIRWTPLLDSESSLDYGHSITQASSEKIWRAGKLLFAHLSSSRPGLIRDHKHHLRHHRQCCSGKDLVDWLLSAGAAVQTRGQAVGIGQVLLDSGVLTHVRQEWHFQDKDTQFYRFAELELSPEPGAGPRDPEELLEALGFLAQLGPDALLSMALRKPPAQRTQDELELIFEELLHIKAVAHLSNSVKRELAAVLMFEGHQRAGTVLFSQGDKGTSWYIIWKGSVNVVTHGKGLVATLHEGDDFGQLALVNDAPRAATILLREDNCHFLRVDKQDFNRILKDVEANTVRLKEHGKVVLVLQKDLQGGSGQAASGRSSSRYLVMAGTPEKILEHLLEFMRLDATLYDPVDTLLGDFLLTYTVFMPTSQLCRALLHHFRXEPLEGSEQDKASYSLRKRRKILRLVSQWVLLYGRLLQGDRSTTALLQNLADLASRDPQLGGLCQEQGQERRRPRALENGDGSAFPQPKARSSAMWLGSPEEAMLDSSCALRAQDKVPYEIFRADHSCVVSVLPVNAAVRDVLRALAPRLRRDREHVLVKVNSAGERAVLPQDAVGVFTALGLNERLFVVSRDELGSLTPHPEQLGPHAGSSDTLDLISSKDLASHLTDYDWNLFKSIHQVEMIHYIVGPHKFHEVATANLARVLRRFNELQFWVATELCLCPELGRRAQLLRKFIKLAAHLKEQKNLNSFFAVMFGVSNTAVTRLAKTWERLPHKIRKLHSALERMLDPSWNHRVYRLAVAKLSPPIIPFVPLLLKDMTFIHEGNRTLAENLINFEKMHMMAKTVRVLQRCRGHAHAPLSPLRSRSPHRPEDTKAVRISTCSEQSLSVRNPVSTWAYLQHLRAIDSQKELLRLSRELEP
SIO_010081: RAPGEF3
subclass of: SO_0000673
so part of: RAPGEF3
location: complement(join(573497..573615,574031..574102,574300..574354,574508..574572,574653..574740,574935..574985,575172..575262,575340..575522,575679..575804,575943..576040,576131..576277,576373..576454,576573..576612,576947..577029,577115..577263,577460..577538,578115..578206,578407..578516,578589..578735,578816..578892,579004..579064,579300..579384,579558..579732,579806..579927,580001..580107,580318..580371,584365..584448))
location: region:573497-584448:-1
so has part: feature:584365-584448:-1:exon
so has part: feature:580318-580371:-1:exon
so has part: feature:580001-580107:-1:exon
so has part: feature:579806-579927:-1:exon
so has part: feature:579558-579732:-1:exon
so has part: feature:579300-579384:-1:exon
so has part: feature:579004-579064:-1:exon
so has part: feature:578816-578892:-1:exon
so has part: feature:578589-578735:-1:exon
so has part: feature:578407-578516:-1:exon
so has part: feature:578115-578206:-1:exon
so has part: feature:577460-577538:-1:exon
so has part: feature:577115-577263:-1:exon
so has part: feature:576947-577029:-1:exon
so has part: feature:576573-576612:-1:exon
so has part: feature:576373-576454:-1:exon
so has part: feature:576131-576277:-1:exon
so has part: feature:575943-576040:-1:exon
so has part: feature:575679-575804:-1:exon
so has part: feature:575340-575522:-1:exon
so has part: feature:575172-575262:-1:exon
so has part: feature:574935-574985:-1:exon
so has part: feature:574653-574740:-1:exon
so has part: feature:574508-574572:-1:exon
so has part: feature:574300-574354:-1:exon
so has part: feature:574031-574102:-1:exon
so has part: feature:573497-573615:-1:exon

XP_030823034.1
type: Protein
SIO_000068: ncbiprotein

position:573497:-1
position: 573497
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:584448:-1
position: 584448
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:584365-584448:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:580318-580371:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:580001-580107:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:579806-579927:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:579558-579732:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:579300-579384:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:579004-579064:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:578816-578892:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:578589-578735:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:578407-578516:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:578115-578206:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:577460-577538:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:577115-577263:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:576947-577029:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:576573-576612:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:576373-576454:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:576131-576277:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:575943-576040:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:575679-575804:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:575340-575522:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:575172-575262:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:574935-574985:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:574653-574740:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:574508-574572:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:574300-574354:-1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:574031-574102:-1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:573497-573615:-1:exon

SLC48A1
type: Gene
subclass of: SO_0000704
RO_0002162: 87175
gene: SLC48A1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 590547..597064
location: region:590547-597064:1
so has part: feature:590547-597064:1:exon
subclass of: SO_0000010

115914603
type: Gene
SIO_000068: ncbigene

position:590547:1
position: 590547
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:597064:1
position: 597064
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:590547-597064:1:exon

SLC48A1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 87175
gene: SLC48A1
product: solute carrier family 48 member 1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 ESTs, 8 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
transcript id: XM_030967212.1
SIO_010081: SLC48A1
subclass of: SO_0000673
so part of: SLC48A1
location: join(590547..590717,595516..595683,596680..597064)
location: region:590547-597064:1
so has part: feature:590547-590717:1:exon
so has part: feature:595516-595683:1:exon
so has part: feature:596680-597064:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:590547-590717:1:exon

position:590717:1
position: 590717
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:595516-595683:1:exon

position:595516:1
position: 595516
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:595683:1
position: 595683
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:596680-597064:1:exon

position:596680:1
position: 596680
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

SLC48A1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 87175
gene: SLC48A1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: heme transporter HRG1
translation: MALSGALALRVAYASFGALSGLSAFCAWSVVPALRQPGTAAAGGLSGVLALWALITHVMYLQDYWRTWLKGLRFFLSVGILFSALSGLGFCAFLALAITQHQSLTDPKSYYLSCVWSFMALKWALLLSLYSHRYRAEFADISILSDF
SIO_010081: SLC48A1
subclass of: SO_0000673
so part of: SLC48A1
location: join(590579..590717,595516..595683,596680..596816)
location: region:590579-596816:1
so has part: feature:590579-590717:1:exon
so has part: feature:595516-595683:1:exon
so has part: feature:596680-596816:1:exon

XP_030823072.1
type: Protein
SIO_000068: ncbiprotein

position:590579:1
position: 590579
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:596816:1
position: 596816
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:590579-590717:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:595516-595683:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:596680-596816:1:exon

LOC115914601
type: Gene
subclass of: SO_0000704
RO_0002162: 87175
gene: LOC115914601
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 604388..608864
location: region:604388-608864:1
so has part: feature:604388-608864:1:exon
subclass of: SO_0000010

115914601
type: Gene
SIO_000068: ncbigene

position:604388:1
position: 604388
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:608864:1
position: 608864
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:604388-608864:1:exon

LOC115914601
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 87175
gene: LOC115914601
product: twist-related protein 2-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 13 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XM_030967209.1
SIO_010081: LOC115914601
subclass of: SO_0000673
so part of: LOC115914601
location: join(604388..605508,608808..608864)
location: region:604388-608864:1
so has part: feature:604388-605508:1:exon
so has part: feature:608808-608864:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:604388-605508:1:exon

position:605508:1
position: 605508
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:608808-608864:1:exon

position:608808:1
position: 608808
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC115914601
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 87175
gene: LOC115914601
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: twist-related protein 2-like
translation: MKEENLSPESPEGSAATSEDEAERLPRKSGRKRGQGPSGAPEAQGKRSRRSPAPQPPEDAHAQRVIANVRERQRTQSLNDAFAELRKIIPTLPSDKLSKIQTLKLAARYIDFLCQVLQSDELDHKVATSCNFLAHERLSYAFSVWRMEGAWSMSASH
SIO_010081: LOC115914601
subclass of: SO_0000673
so part of: LOC115914601
location: 605030..605503
location: region:605030-605503:1
so has part: feature:605030-605503:1:exon

XP_030823069.1
type: Protein
SIO_000068: ncbiprotein

position:605030:1
position: 605030
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:605503:1
position: 605503
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:605030-605503:1:exon

HDAC7
type: Gene
subclass of: SO_0000704
RO_0002162: 87175
gene: HDAC7
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(610144..668653)
location: region:610144-668653:-1
so has part: feature:610144-668653:-1:exon
subclass of: SO_0000010

115914581
type: Gene
SIO_000068: ncbigene

position:610144:-1
position: 610144
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:668653:-1
position: 668653
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:610144-668653:-1:exon

HDAC7
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 87175
gene: HDAC7
product: histone deacetylase 7, transcript variant X5
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, 8 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_030967172.1
SIO_010081: HDAC7
subclass of: SO_0000673
so part of: HDAC7
location: complement(join(610144..611628,611988..612126,612333..612417,612555..612688,612871..612989,613125..613222,613776..613895,614137..614224,614370..614425,614654..614761,615709..615758,616079..616199,616691..616824,617174..617384,617903..618079,619050..619258,619787..619985,620342..620458,620849..620958,621433..621555,621710..621825,621913..622024,622665..622755,623617..623807,668635..668653))
location: region:610144-668653:-1
so has part: feature:668635-668653:-1:exon
so has part: feature:623617-623807:-1:exon
so has part: feature:622665-622755:-1:exon
so has part: feature:621913-622024:-1:exon
so has part: feature:621710-621825:-1:exon
so has part: feature:621433-621555:-1:exon
so has part: feature:620849-620958:-1:exon
so has part: feature:620342-620458:-1:exon
so has part: feature:619787-619985:-1:exon
so has part: feature:619050-619258:-1:exon
so has part: feature:617903-618079:-1:exon
so has part: feature:617174-617384:-1:exon
so has part: feature:616691-616824:-1:exon
so has part: feature:616079-616199:-1:exon
so has part: feature:615709-615758:-1:exon
so has part: feature:614654-614761:-1:exon
so has part: feature:614370-614425:-1:exon
so has part: feature:614137-614224:-1:exon
so has part: feature:613776-613895:-1:exon
so has part: feature:613125-613222:-1:exon
so has part: feature:612871-612989:-1:exon
so has part: feature:612555-612688:-1:exon
so has part: feature:612333-612417:-1:exon
so has part: feature:611988-612126:-1:exon
so has part: feature:610144-611628:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:668635-668653:-1:exon

position:668635:-1
position: 668635
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:623617-623807:-1:exon

position:623617:-1
position: 623617
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:623807:-1
position: 623807
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:622665-622755:-1:exon

position:622665:-1
position: 622665
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:622755:-1
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reference: sequence
type: ReverseStrandPosition
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urn:…
SIO_000300: 4
SIO_000628: feature:621913-622024:-1:exon

position:621913:-1
position: 621913
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:622024:-1
position: 622024
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:621710-621825:-1:exon

position:621710:-1
position: 621710
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:621825:-1
position: 621825
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:621433-621555:-1:exon

position:621433:-1
position: 621433
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:621555:-1
position: 621555
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:620849-620958:-1:exon

position:620849:-1
position: 620849
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:620958:-1
position: 620958
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:620342-620458:-1:exon

position:620342:-1
position: 620342
reference: sequence
type: ReverseStrandPosition
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position:620458:-1
position: 620458
reference: sequence
type: ReverseStrandPosition
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urn:…
SIO_000300: 9
SIO_000628: feature:619787-619985:-1:exon

position:619787:-1
position: 619787
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:619985:-1
position: 619985
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:619050-619258:-1:exon

position:619050:-1
position: 619050
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:619258:-1
position: 619258
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:617903-618079:-1:exon

position:617903:-1
position: 617903
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:618079:-1
position: 618079
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:617174-617384:-1:exon

position:617174:-1
position: 617174
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:617384:-1
position: 617384
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:616691-616824:-1:exon

position:616691:-1
position: 616691
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:616824:-1
position: 616824
reference: sequence
type: ReverseStrandPosition
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urn:…
SIO_000300: 14
SIO_000628: feature:616079-616199:-1:exon

position:616079:-1
position: 616079
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:616199:-1
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reference: sequence
type: ReverseStrandPosition
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urn:…
SIO_000300: 15
SIO_000628: feature:615709-615758:-1:exon

position:615709:-1
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reference: sequence
type: ReverseStrandPosition
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position:615758:-1
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reference: sequence
type: ReverseStrandPosition
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urn:…
SIO_000300: 16
SIO_000628: feature:614654-614761:-1:exon

position:614654:-1
position: 614654
reference: sequence
type: ReverseStrandPosition
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position:614761:-1
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reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:614370-614425:-1:exon

position:614370:-1
position: 614370
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:614425:-1
position: 614425
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:614137-614224:-1:exon

position:614137:-1
position: 614137
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:614224:-1
position: 614224
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:613776-613895:-1:exon

position:613776:-1
position: 613776
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:613895:-1
position: 613895
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:613125-613222:-1:exon

position:613125:-1
position: 613125
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:613222:-1
position: 613222
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:612871-612989:-1:exon

position:612871:-1
position: 612871
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:612989:-1
position: 612989
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 22
SIO_000628: feature:612555-612688:-1:exon

position:612555:-1
position: 612555
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:612688:-1
position: 612688
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 23
SIO_000628: feature:612333-612417:-1:exon

position:612333:-1
position: 612333
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:612417:-1
position: 612417
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 24
SIO_000628: feature:611988-612126:-1:exon

position:611988:-1
position: 611988
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:612126:-1
position: 612126
reference: sequence
type: ReverseStrandPosition
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urn:…
SIO_000300: 25
SIO_000628: feature:610144-611628:-1:exon

position:611628:-1
position: 611628
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

HDAC7
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 87175
gene: HDAC7
product: histone deacetylase 7, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, 7 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
transcript id: XM_030967169.1
SIO_010081: HDAC7
subclass of: SO_0000673
so part of: HDAC7
location: complement(join(610144..611628,611988..612126,612333..612417,612555..612688,612871..612989,613125..613222,613776..613895,614137..614224,614370..614425,614654..614761,615709..615758,616079..616199,616691..616824,617174..617384,617903..618079,619050..619258,619787..619985,620342..620458,620849..620958,621433..621555,621710..621825,621913..622024,622665..622755,623617..623807,668032..668247))
location: region:610144-668247:-1
so has part: feature:668032-668247:-1:exon
so has part: feature:623617-623807:-1:exon
so has part: feature:622665-622755:-1:exon
so has part: feature:621913-622024:-1:exon
so has part: feature:621710-621825:-1:exon
so has part: feature:621433-621555:-1:exon
so has part: feature:620849-620958:-1:exon
so has part: feature:620342-620458:-1:exon
so has part: feature:619787-619985:-1:exon
so has part: feature:619050-619258:-1:exon
so has part: feature:617903-618079:-1:exon
so has part: feature:617174-617384:-1:exon
so has part: feature:616691-616824:-1:exon
so has part: feature:616079-616199:-1:exon
so has part: feature:615709-615758:-1:exon
so has part: feature:614654-614761:-1:exon
so has part: feature:614370-614425:-1:exon
so has part: feature:614137-614224:-1:exon
so has part: feature:613776-613895:-1:exon
so has part: feature:613125-613222:-1:exon
so has part: feature:612871-612989:-1:exon
so has part: feature:612555-612688:-1:exon
so has part: feature:612333-612417:-1:exon
so has part: feature:611988-612126:-1:exon
so has part: feature:610144-611628:-1:exon

position:668247:-1
position: 668247
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:668032-668247:-1:exon

position:668032:-1
position: 668032
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:623617-623807:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:622665-622755:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:621913-622024:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:621710-621825:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:621433-621555:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:620849-620958:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:620342-620458:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:619787-619985:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:619050-619258:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:617903-618079:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:617174-617384:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:616691-616824:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:616079-616199:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:615709-615758:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:614654-614761:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:614370-614425:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:614137-614224:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:613776-613895:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:613125-613222:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:612871-612989:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:612555-612688:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:612333-612417:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:611988-612126:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:610144-611628:-1:exon

HDAC7
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 87175
gene: HDAC7
product: histone deacetylase 7, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, 8 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XM_030967170.1
SIO_010081: HDAC7
subclass of: SO_0000673
so part of: HDAC7
location: complement(join(610144..611628,611988..612126,612333..612417,612555..612688,612871..612989,613125..613222,613776..613895,614137..614224,614370..614425,614654..614761,615709..615758,616079..616199,616691..616824,617174..617384,617903..618079,619050..619258,619787..619985,620342..620458,620849..620958,621433..621555,621710..621825,621913..622024,622665..622755,623617..623807,650581..650640))
location: region:610144-650640:-1
so has part: feature:650581-650640:-1:exon
so has part: feature:623617-623807:-1:exon
so has part: feature:622665-622755:-1:exon
so has part: feature:621913-622024:-1:exon
so has part: feature:621710-621825:-1:exon
so has part: feature:621433-621555:-1:exon
so has part: feature:620849-620958:-1:exon
so has part: feature:620342-620458:-1:exon
so has part: feature:619787-619985:-1:exon
so has part: feature:619050-619258:-1:exon
so has part: feature:617903-618079:-1:exon
so has part: feature:617174-617384:-1:exon
so has part: feature:616691-616824:-1:exon
so has part: feature:616079-616199:-1:exon
so has part: feature:615709-615758:-1:exon
so has part: feature:614654-614761:-1:exon
so has part: feature:614370-614425:-1:exon
so has part: feature:614137-614224:-1:exon
so has part: feature:613776-613895:-1:exon
so has part: feature:613125-613222:-1:exon
so has part: feature:612871-612989:-1:exon
so has part: feature:612555-612688:-1:exon
so has part: feature:612333-612417:-1:exon
so has part: feature:611988-612126:-1:exon
so has part: feature:610144-611628:-1:exon

position:650640:-1
position: 650640
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:650581-650640:-1:exon

position:650581:-1
position: 650581
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:623617-623807:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:622665-622755:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:621913-622024:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:621710-621825:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:621433-621555:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:620849-620958:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:620342-620458:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:619787-619985:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:619050-619258:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:617903-618079:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:617174-617384:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:616691-616824:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:616079-616199:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:615709-615758:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:614654-614761:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:614370-614425:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:614137-614224:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:613776-613895:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:613125-613222:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:612871-612989:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:612555-612688:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:612333-612417:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:611988-612126:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:610144-611628:-1:exon

HDAC7
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 87175
gene: HDAC7
product: histone deacetylase 7, transcript variant X6
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, 7 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_030967173.1
SIO_010081: HDAC7
subclass of: SO_0000673
so part of: HDAC7
location: complement(join(610144..611628,611988..612126,612333..612417,612555..612688,612871..612989,613125..613222,613776..613895,614137..614224,614370..614425,614654..614761,615709..615758,616079..616199,616691..616824,617174..617384,617903..618079,619050..619258,619787..619985,620849..620958,621433..621555,621710..621825,621913..622024,622665..622755,623617..623807,642702..643463))
location: region:610144-643463:-1
so has part: feature:642702-643463:-1:exon
so has part: feature:623617-623807:-1:exon
so has part: feature:622665-622755:-1:exon
so has part: feature:621913-622024:-1:exon
so has part: feature:621710-621825:-1:exon
so has part: feature:621433-621555:-1:exon
so has part: feature:620849-620958:-1:exon
so has part: feature:619787-619985:-1:exon
so has part: feature:619050-619258:-1:exon
so has part: feature:617903-618079:-1:exon
so has part: feature:617174-617384:-1:exon
so has part: feature:616691-616824:-1:exon
so has part: feature:616079-616199:-1:exon
so has part: feature:615709-615758:-1:exon
so has part: feature:614654-614761:-1:exon
so has part: feature:614370-614425:-1:exon
so has part: feature:614137-614224:-1:exon
so has part: feature:613776-613895:-1:exon
so has part: feature:613125-613222:-1:exon
so has part: feature:612871-612989:-1:exon
so has part: feature:612555-612688:-1:exon
so has part: feature:612333-612417:-1:exon
so has part: feature:611988-612126:-1:exon
so has part: feature:610144-611628:-1:exon

position:643463:-1
position: 643463
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:642702-643463:-1:exon

position:642702:-1
position: 642702
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:623617-623807:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:622665-622755:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:621913-622024:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:621710-621825:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:621433-621555:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:620849-620958:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:619787-619985:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:619050-619258:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:617903-618079:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:617174-617384:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:616691-616824:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:616079-616199:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:615709-615758:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:614654-614761:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:614370-614425:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:614137-614224:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:613776-613895:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:613125-613222:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:612871-612989:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:612555-612688:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:612333-612417:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:611988-612126:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:610144-611628:-1:exon

HDAC7
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 87175
gene: HDAC7
product: histone deacetylase 7, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, 7 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_030967168.1
SIO_010081: HDAC7
subclass of: SO_0000673
so part of: HDAC7
location: complement(join(610144..611628,611988..612126,612333..612417,612555..612688,612871..612989,613125..613222,613776..613895,614137..614224,614370..614425,614654..614761,615709..615758,616079..616199,616691..616824,617174..617384,617903..618079,619050..619258,619787..619985,620342..620458,620849..620958,621433..621555,621710..621825,621913..622024,622665..622755,623617..623807,642702..643462))
location: region:610144-643462:-1
so has part: feature:642702-643462:-1:exon
so has part: feature:623617-623807:-1:exon
so has part: feature:622665-622755:-1:exon
so has part: feature:621913-622024:-1:exon
so has part: feature:621710-621825:-1:exon
so has part: feature:621433-621555:-1:exon
so has part: feature:620849-620958:-1:exon
so has part: feature:620342-620458:-1:exon
so has part: feature:619787-619985:-1:exon
so has part: feature:619050-619258:-1:exon
so has part: feature:617903-618079:-1:exon
so has part: feature:617174-617384:-1:exon
so has part: feature:616691-616824:-1:exon
so has part: feature:616079-616199:-1:exon
so has part: feature:615709-615758:-1:exon
so has part: feature:614654-614761:-1:exon
so has part: feature:614370-614425:-1:exon
so has part: feature:614137-614224:-1:exon
so has part: feature:613776-613895:-1:exon
so has part: feature:613125-613222:-1:exon
so has part: feature:612871-612989:-1:exon
so has part: feature:612555-612688:-1:exon
so has part: feature:612333-612417:-1:exon
so has part: feature:611988-612126:-1:exon
so has part: feature:610144-611628:-1:exon

position:643462:-1
position: 643462
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:642702-643462:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:623617-623807:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:622665-622755:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:621913-622024:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:621710-621825:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:621433-621555:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:620849-620958:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:620342-620458:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:619787-619985:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:619050-619258:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:617903-618079:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:617174-617384:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:616691-616824:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:616079-616199:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:615709-615758:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:614654-614761:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:614370-614425:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:614137-614224:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:613776-613895:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:613125-613222:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:612871-612989:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:612555-612688:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:612333-612417:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:611988-612126:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:610144-611628:-1:exon

HDAC7
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 87175
gene: HDAC7
product: histone deacetylase 7, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, 8 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
transcript id: XM_030967171.1
SIO_010081: HDAC7
subclass of: SO_0000673
so part of: HDAC7
location: complement(join(610144..611628,611988..612126,612333..612417,612555..612688,612871..612989,613125..613222,613776..613895,614137..614224,614370..614425,614654..614761,615709..615758,616079..616199,616691..616824,617174..617384,617903..618079,619050..619258,619787..619985,620342..620458,620849..620958,621433..621555,621710..621825,621913..622024,622665..622755,623617..623807,634390..634474))
location: region:610144-634474:-1
so has part: feature:634390-634474:-1:exon
so has part: feature:623617-623807:-1:exon
so has part: feature:622665-622755:-1:exon
so has part: feature:621913-622024:-1:exon
so has part: feature:621710-621825:-1:exon
so has part: feature:621433-621555:-1:exon
so has part: feature:620849-620958:-1:exon
so has part: feature:620342-620458:-1:exon
so has part: feature:619787-619985:-1:exon
so has part: feature:619050-619258:-1:exon
so has part: feature:617903-618079:-1:exon
so has part: feature:617174-617384:-1:exon
so has part: feature:616691-616824:-1:exon
so has part: feature:616079-616199:-1:exon
so has part: feature:615709-615758:-1:exon
so has part: feature:614654-614761:-1:exon
so has part: feature:614370-614425:-1:exon
so has part: feature:614137-614224:-1:exon
so has part: feature:613776-613895:-1:exon
so has part: feature:613125-613222:-1:exon
so has part: feature:612871-612989:-1:exon
so has part: feature:612555-612688:-1:exon
so has part: feature:612333-612417:-1:exon
so has part: feature:611988-612126:-1:exon
so has part: feature:610144-611628:-1:exon

position:634474:-1
position: 634474
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:634390-634474:-1:exon

position:634390:-1
position: 634390
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:623617-623807:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:622665-622755:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:621913-622024:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:621710-621825:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:621433-621555:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:620849-620958:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:620342-620458:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:619787-619985:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:619050-619258:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:617903-618079:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:617174-617384:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:616691-616824:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:616079-616199:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:615709-615758:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:614654-614761:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:614370-614425:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:614137-614224:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:613776-613895:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:613125-613222:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:612871-612989:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:612555-612688:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:612333-612417:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:611988-612126:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:610144-611628:-1:exon

HDAC7
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 87175
gene: HDAC7
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: histone deacetylase 7 isoform X2
translation: MQGQSQAAVSPCPSPRVPQAVPMDLRIGQRLLKPQDTALLALKQQQLQHQLFLASLHQQQVEQLTHQHVRVAMESPHREAEPGQQEQELRQILNKDKSKRSAVASTVVKQKLAEVILKKQQAALERTSNAPAAALPYRSLEPLEPEGPSPAMLSTFLSPVPSTSLDTPEHFPLRKTASEPNLKVRCKPRKCLERRKNPLTRKESAPPSLKRRPPDAIDSSPSSSSTPVSGCSSPNDSLPAEHAALPAAPGGAHEAPLAQRLLMQESSLAQFALQSAASLPAITLGLPATTGARGDTERRALPSLAHRVPVLNGPVLPGSHQPVFIPASLEQHEAGSALSPRLQPVIILEPSVTHAPLVAVPGLGAVPFSFAPSLVPAERLALPGQHKPLGRTRSEPLPPSPRAVQQHLLFQQHHAHFLERLKQQTHLGKRMAKSSEKPRLRQIPSSEDMEAEGSVPEAAAEAAEPSRARPGSSGKEMGQPQEELVLQQALLWDSFQRVQQQLLKRQPLADPPVLPPGHRPLSRAQSSPATATVSLPAQDTKALALPVQEQPPKPHFTTGLVYDSVMLKHQCSCGDNSNHPEHAGRIQSIWSRLQERGLRSRCECLRGRKATLEELQCVHSERHVLLYGTNPLNRLKLDNGKLAGILSQRTFVMLPCGGVGVDSDTIWNELHSSNAARWAAGSVTELAFKVATRELKNGFAVVRPPGHHADPSTAMGFCFFNSVAIAARQLQQKGKLSKILIVDWDVHHGNGTQQIFYRDPEVLYISLHRHDDGNFFPGSGAADEVGAGPGEGFNVNVAWAGGLDPPMGDPEYLAAFRTVVMPIAHEFCPDVVLVSAGFDAAEGHPPPLGGYKVSAKCFGYMTKQLMSLAGGAVVLALEGGHDLTAICDASEACVSALLGHEPEPLPEDSLRQKPNANAVRSLEAVIQVQSRYWVAVQRFASKLGCSFLEAQHHEADEVETVTALASLSVAVMVEKRAQEEPMEQEEPMNQ
SIO_010081: HDAC7
subclass of: SO_0000673
so part of: HDAC7
location: complement(join(611583..611628,611988..612126,612333..612417,612555..612688,612871..612989,613125..613222,613776..613895,614137..614224,614370..614425,614654..614761,615709..615758,616079..616199,616691..616824,617174..617384,617903..618079,619050..619258,619787..619985,620342..620458,620849..620958,621433..621555,621710..621825,621913..622024,622665..622755,623617..623807,668032..668050))
location: region:611583-668050:-1
so has part: feature:668032-668050:-1:exon
so has part: feature:623617-623807:-1:exon
so has part: feature:622665-622755:-1:exon
so has part: feature:621913-622024:-1:exon
so has part: feature:621710-621825:-1:exon
so has part: feature:621433-621555:-1:exon
so has part: feature:620849-620958:-1:exon
so has part: feature:620342-620458:-1:exon
so has part: feature:619787-619985:-1:exon
so has part: feature:619050-619258:-1:exon
so has part: feature:617903-618079:-1:exon
so has part: feature:617174-617384:-1:exon
so has part: feature:616691-616824:-1:exon
so has part: feature:616079-616199:-1:exon
so has part: feature:615709-615758:-1:exon
so has part: feature:614654-614761:-1:exon
so has part: feature:614370-614425:-1:exon
so has part: feature:614137-614224:-1:exon
so has part: feature:613776-613895:-1:exon
so has part: feature:613125-613222:-1:exon
so has part: feature:612871-612989:-1:exon
so has part: feature:612555-612688:-1:exon
so has part: feature:612333-612417:-1:exon
so has part: feature:611988-612126:-1:exon
so has part: feature:611583-611628:-1:exon

XP_030823029.1
type: Protein
SIO_000068: ncbiprotein

position:611583:-1
position: 611583
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:668050:-1
position: 668050
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:668032-668050:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:623617-623807:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:622665-622755:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:621913-622024:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:621710-621825:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:621433-621555:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:620849-620958:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:620342-620458:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:619787-619985:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:619050-619258:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:617903-618079:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:617174-617384:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:616691-616824:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:616079-616199:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:615709-615758:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:614654-614761:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:614370-614425:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:614137-614224:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:613776-613895:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:613125-613222:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:612871-612989:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:612555-612688:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:612333-612417:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:611988-612126:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:611583-611628:-1:exon

HDAC7
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 87175
gene: HDAC7
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: histone deacetylase 7 isoform X4
translation: MFSGLEICTTLVMFSPSSAVSPCPSPRVPQAVPMDLRIGQRLLKPQDTALLALKQQQLQHQLFLASLHQQQVEQLTHQHVRVAMESPHREAEPGQQEQELRQILNKDKSKRSAVASTVVKQKLAEVILKKQQAALERTSNAPAAALPYRSLEPLEPEGPSPAMLSTFLSPVPSTSLDTPEHFPLRKTASEPNLKVRCKPRKCLERRKNPLTRKESAPPSLKRRPPDAIDSSPSSSSTPVSGCSSPNDSLPAEHAALPAAPGGAHEGDTERRALPSLAHRVPVLNGPVLPGSHQPVFIPASLEQHEAGSALSPRLQPVIILEPSVTHAPLVAVPGLGAVPFSFAPSLVPAERLALPGQHKPLGRTRSEPLPPSPRAVQQHLLFQQHHAHFLERLKQQTHLGKRMAKSSEKPRLRQIPSSEDMEAEGSVPEAAAEAAEPSRARPGSSGKEMGQPQEELVLQQALLWDSFQRVQQQLLKRQPLADPPVLPPGHRPLSRAQSSPATATVSLPAQDTKALALPVQEQPPKPHFTTGLVYDSVMLKHQCSCGDNSNHPEHAGRIQSIWSRLQERGLRSRCECLRGRKATLEELQCVHSERHVLLYGTNPLNRLKLDNGKLAGILSQRTFVMLPCGGVGVDSDTIWNELHSSNAARWAAGSVTELAFKVATRELKNGFAVVRPPGHHADPSTAMGFCFFNSVAIAARQLQQKGKLSKILIVDWDVHHGNGTQQIFYRDPEVLYISLHRHDDGNFFPGSGAADEVGAGPGEGFNVNVAWAGGLDPPMGDPEYLAAFRTVVMPIAHEFCPDVVLVSAGFDAAEGHPPPLGGYKVSAKCFGYMTKQLMSLAGGAVVLALEGGHDLTAICDASEACVSALLGHEPEPLPEDSLRQKPNANAVRSLEAVIQVQSRYWVAVQRFASKLGCSFLEAQHHEADEVETVTALASLSVAVMVEKRAQEEPMEQEEPMNQ
SIO_010081: HDAC7
subclass of: SO_0000673
so part of: HDAC7
location: complement(join(611583..611628,611988..612126,612333..612417,612555..612688,612871..612989,613125..613222,613776..613895,614137..614224,614370..614425,614654..614761,615709..615758,616079..616199,616691..616824,617174..617384,617903..618079,619050..619258,619787..619985,620849..620958,621433..621555,621710..621825,621913..622024,622665..622755,623617..623807,642702..642753))
location: region:611583-642753:-1
so has part: feature:642702-642753:-1:exon
so has part: feature:623617-623807:-1:exon
so has part: feature:622665-622755:-1:exon
so has part: feature:621913-622024:-1:exon
so has part: feature:621710-621825:-1:exon
so has part: feature:621433-621555:-1:exon
so has part: feature:620849-620958:-1:exon
so has part: feature:619787-619985:-1:exon
so has part: feature:619050-619258:-1:exon
so has part: feature:617903-618079:-1:exon
so has part: feature:617174-617384:-1:exon
so has part: feature:616691-616824:-1:exon
so has part: feature:616079-616199:-1:exon
so has part: feature:615709-615758:-1:exon
so has part: feature:614654-614761:-1:exon
so has part: feature:614370-614425:-1:exon
so has part: feature:614137-614224:-1:exon
so has part: feature:613776-613895:-1:exon
so has part: feature:613125-613222:-1:exon
so has part: feature:612871-612989:-1:exon
so has part: feature:612555-612688:-1:exon
so has part: feature:612333-612417:-1:exon
so has part: feature:611988-612126:-1:exon
so has part: feature:611583-611628:-1:exon

XP_030823033.1
type: Protein
SIO_000068: ncbiprotein

position:642753:-1
position: 642753
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:642702-642753:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:623617-623807:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:622665-622755:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:621913-622024:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:621710-621825:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:621433-621555:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:620849-620958:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:619787-619985:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:619050-619258:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:617903-618079:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:617174-617384:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:616691-616824:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:616079-616199:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:615709-615758:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:614654-614761:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:614370-614425:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:614137-614224:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:613776-613895:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:613125-613222:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:612871-612989:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:612555-612688:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:612333-612417:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:611988-612126:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:611583-611628:-1:exon

HDAC7
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 87175
gene: HDAC7
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: histone deacetylase 7 isoform X1
translation: MFSGLEICTTLVMFSPSSAVSPCPSPRVPQAVPMDLRIGQRLLKPQDTALLALKQQQLQHQLFLASLHQQQVEQLTHQHVRVAMESPHREAEPGQQEQELRQILNKDKSKRSAVASTVVKQKLAEVILKKQQAALERTSNAPAAALPYRSLEPLEPEGPSPAMLSTFLSPVPSTSLDTPEHFPLRKTASEPNLKVRCKPRKCLERRKNPLTRKESAPPSLKRRPPDAIDSSPSSSSTPVSGCSSPNDSLPAEHAALPAAPGGAHEAPLAQRLLMQESSLAQFALQSAASLPAITLGLPATTGARGDTERRALPSLAHRVPVLNGPVLPGSHQPVFIPASLEQHEAGSALSPRLQPVIILEPSVTHAPLVAVPGLGAVPFSFAPSLVPAERLALPGQHKPLGRTRSEPLPPSPRAVQQHLLFQQHHAHFLERLKQQTHLGKRMAKSSEKPRLRQIPSSEDMEAEGSVPEAAAEAAEPSRARPGSSGKEMGQPQEELVLQQALLWDSFQRVQQQLLKRQPLADPPVLPPGHRPLSRAQSSPATATVSLPAQDTKALALPVQEQPPKPHFTTGLVYDSVMLKHQCSCGDNSNHPEHAGRIQSIWSRLQERGLRSRCECLRGRKATLEELQCVHSERHVLLYGTNPLNRLKLDNGKLAGILSQRTFVMLPCGGVGVDSDTIWNELHSSNAARWAAGSVTELAFKVATRELKNGFAVVRPPGHHADPSTAMGFCFFNSVAIAARQLQQKGKLSKILIVDWDVHHGNGTQQIFYRDPEVLYISLHRHDDGNFFPGSGAADEVGAGPGEGFNVNVAWAGGLDPPMGDPEYLAAFRTVVMPIAHEFCPDVVLVSAGFDAAEGHPPPLGGYKVSAKCFGYMTKQLMSLAGGAVVLALEGGHDLTAICDASEACVSALLGHEPEPLPEDSLRQKPNANAVRSLEAVIQVQSRYWVAVQRFASKLGCSFLEAQHHEADEVETVTALASLSVAVMVEKRAQEEPMEQEEPMNQ
SIO_010081: HDAC7
subclass of: SO_0000673
so part of: HDAC7
location: complement(join(611583..611628,611988..612126,612333..612417,612555..612688,612871..612989,613125..613222,613776..613895,614137..614224,614370..614425,614654..614761,615709..615758,616079..616199,616691..616824,617174..617384,617903..618079,619050..619258,619787..619985,620342..620458,620849..620958,621433..621555,621710..621825,621913..622024,622665..622755,623617..623807,642702..642753))
location: region:611583-642753:-1
so has part: feature:642702-642753:-1:exon
so has part: feature:623617-623807:-1:exon
so has part: feature:622665-622755:-1:exon
so has part: feature:621913-622024:-1:exon
so has part: feature:621710-621825:-1:exon
so has part: feature:621433-621555:-1:exon
so has part: feature:620849-620958:-1:exon
so has part: feature:620342-620458:-1:exon
so has part: feature:619787-619985:-1:exon
so has part: feature:619050-619258:-1:exon
so has part: feature:617903-618079:-1:exon
so has part: feature:617174-617384:-1:exon
so has part: feature:616691-616824:-1:exon
so has part: feature:616079-616199:-1:exon
so has part: feature:615709-615758:-1:exon
so has part: feature:614654-614761:-1:exon
so has part: feature:614370-614425:-1:exon
so has part: feature:614137-614224:-1:exon
so has part: feature:613776-613895:-1:exon
so has part: feature:613125-613222:-1:exon
so has part: feature:612871-612989:-1:exon
so has part: feature:612555-612688:-1:exon
so has part: feature:612333-612417:-1:exon
so has part: feature:611988-612126:-1:exon
so has part: feature:611583-611628:-1:exon

XP_030823028.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:642702-642753:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:623617-623807:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:622665-622755:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:621913-622024:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:621710-621825:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:621433-621555:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:620849-620958:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:620342-620458:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:619787-619985:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:619050-619258:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:617903-618079:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:617174-617384:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:616691-616824:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:616079-616199:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:615709-615758:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:614654-614761:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:614370-614425:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:614137-614224:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:613776-613895:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:613125-613222:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:612871-612989:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:612555-612688:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:612333-612417:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:611988-612126:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:611583-611628:-1:exon

HDAC7
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 87175
gene: HDAC7
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: histone deacetylase 7 isoform X3
translation: MDLRIGQRLLKPQDTALLALKQQQLQHQLFLASLHQQQVEQLTHQHVRVAMESPHREAEPGQQEQELRQILNKDKSKRSAVASTVVKQKLAEVILKKQQAALERTSNAPAAALPYRSLEPLEPEGPSPAMLSTFLSPVPSTSLDTPEHFPLRKTASEPNLKVRCKPRKCLERRKNPLTRKESAPPSLKRRPPDAIDSSPSSSSTPVSGCSSPNDSLPAEHAALPAAPGGAHEAPLAQRLLMQESSLAQFALQSAASLPAITLGLPATTGARGDTERRALPSLAHRVPVLNGPVLPGSHQPVFIPASLEQHEAGSALSPRLQPVIILEPSVTHAPLVAVPGLGAVPFSFAPSLVPAERLALPGQHKPLGRTRSEPLPPSPRAVQQHLLFQQHHAHFLERLKQQTHLGKRMAKSSEKPRLRQIPSSEDMEAEGSVPEAAAEAAEPSRARPGSSGKEMGQPQEELVLQQALLWDSFQRVQQQLLKRQPLADPPVLPPGHRPLSRAQSSPATATVSLPAQDTKALALPVQEQPPKPHFTTGLVYDSVMLKHQCSCGDNSNHPEHAGRIQSIWSRLQERGLRSRCECLRGRKATLEELQCVHSERHVLLYGTNPLNRLKLDNGKLAGILSQRTFVMLPCGGVGVDSDTIWNELHSSNAARWAAGSVTELAFKVATRELKNGFAVVRPPGHHADPSTAMGFCFFNSVAIAARQLQQKGKLSKILIVDWDVHHGNGTQQIFYRDPEVLYISLHRHDDGNFFPGSGAADEVGAGPGEGFNVNVAWAGGLDPPMGDPEYLAAFRTVVMPIAHEFCPDVVLVSAGFDAAEGHPPPLGGYKVSAKCFGYMTKQLMSLAGGAVVLALEGGHDLTAICDASEACVSALLGHEPEPLPEDSLRQKPNANAVRSLEAVIQVQSRYWVAVQRFASKLGCSFLEAQHHEADEVETVTALASLSVAVMVEKRAQEEPMEQEEPMNQ
SIO_010081: HDAC7
subclass of: SO_0000673
so part of: HDAC7
location: complement(join(611583..611628,611988..612126,612333..612417,612555..612688,612871..612989,613125..613222,613776..613895,614137..614224,614370..614425,614654..614761,615709..615758,616079..616199,616691..616824,617174..617384,617903..618079,619050..619258,619787..619985,620342..620458,620849..620958,621433..621555,621710..621825,621913..622024,622665..622755,623617..623760))
location: region:611583-623760:-1
so has part: feature:623617-623760:-1:exon
so has part: feature:622665-622755:-1:exon
so has part: feature:621913-622024:-1:exon
so has part: feature:621710-621825:-1:exon
so has part: feature:621433-621555:-1:exon
so has part: feature:620849-620958:-1:exon
so has part: feature:620342-620458:-1:exon
so has part: feature:619787-619985:-1:exon
so has part: feature:619050-619258:-1:exon
so has part: feature:617903-618079:-1:exon
so has part: feature:617174-617384:-1:exon
so has part: feature:616691-616824:-1:exon
so has part: feature:616079-616199:-1:exon
so has part: feature:615709-615758:-1:exon
so has part: feature:614654-614761:-1:exon
so has part: feature:614370-614425:-1:exon
so has part: feature:614137-614224:-1:exon
so has part: feature:613776-613895:-1:exon
so has part: feature:613125-613222:-1:exon
so has part: feature:612871-612989:-1:exon
so has part: feature:612555-612688:-1:exon
so has part: feature:612333-612417:-1:exon
so has part: feature:611988-612126:-1:exon
so has part: feature:611583-611628:-1:exon

XP_030823030.1
type: Protein
SIO_000068: ncbiprotein

position:623760:-1
position: 623760
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:623617-623760:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:622665-622755:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:621913-622024:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:621710-621825:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:621433-621555:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:620849-620958:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:620342-620458:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:619787-619985:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:619050-619258:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:617903-618079:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:617174-617384:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:616691-616824:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:616079-616199:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:615709-615758:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:614654-614761:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:614370-614425:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:614137-614224:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:613776-613895:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:613125-613222:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:612871-612989:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:612555-612688:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:612333-612417:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:611988-612126:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:611583-611628:-1:exon

HDAC7
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 87175
gene: HDAC7
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: histone deacetylase 7 isoform X3
translation: MDLRIGQRLLKPQDTALLALKQQQLQHQLFLASLHQQQVEQLTHQHVRVAMESPHREAEPGQQEQELRQILNKDKSKRSAVASTVVKQKLAEVILKKQQAALERTSNAPAAALPYRSLEPLEPEGPSPAMLSTFLSPVPSTSLDTPEHFPLRKTASEPNLKVRCKPRKCLERRKNPLTRKESAPPSLKRRPPDAIDSSPSSSSTPVSGCSSPNDSLPAEHAALPAAPGGAHEAPLAQRLLMQESSLAQFALQSAASLPAITLGLPATTGARGDTERRALPSLAHRVPVLNGPVLPGSHQPVFIPASLEQHEAGSALSPRLQPVIILEPSVTHAPLVAVPGLGAVPFSFAPSLVPAERLALPGQHKPLGRTRSEPLPPSPRAVQQHLLFQQHHAHFLERLKQQTHLGKRMAKSSEKPRLRQIPSSEDMEAEGSVPEAAAEAAEPSRARPGSSGKEMGQPQEELVLQQALLWDSFQRVQQQLLKRQPLADPPVLPPGHRPLSRAQSSPATATVSLPAQDTKALALPVQEQPPKPHFTTGLVYDSVMLKHQCSCGDNSNHPEHAGRIQSIWSRLQERGLRSRCECLRGRKATLEELQCVHSERHVLLYGTNPLNRLKLDNGKLAGILSQRTFVMLPCGGVGVDSDTIWNELHSSNAARWAAGSVTELAFKVATRELKNGFAVVRPPGHHADPSTAMGFCFFNSVAIAARQLQQKGKLSKILIVDWDVHHGNGTQQIFYRDPEVLYISLHRHDDGNFFPGSGAADEVGAGPGEGFNVNVAWAGGLDPPMGDPEYLAAFRTVVMPIAHEFCPDVVLVSAGFDAAEGHPPPLGGYKVSAKCFGYMTKQLMSLAGGAVVLALEGGHDLTAICDASEACVSALLGHEPEPLPEDSLRQKPNANAVRSLEAVIQVQSRYWVAVQRFASKLGCSFLEAQHHEADEVETVTALASLSVAVMVEKRAQEEPMEQEEPMNQ
SIO_010081: HDAC7
subclass of: SO_0000673
so part of: HDAC7
location: complement(join(611583..611628,611988..612126,612333..612417,612555..612688,612871..612989,613125..613222,613776..613895,614137..614224,614370..614425,614654..614761,615709..615758,616079..616199,616691..616824,617174..617384,617903..618079,619050..619258,619787..619985,620342..620458,620849..620958,621433..621555,621710..621825,621913..622024,622665..622755,623617..623760))
location: region:611583-623760:-1
so has part: feature:623617-623760:-1:exon
so has part: feature:622665-622755:-1:exon
so has part: feature:621913-622024:-1:exon
so has part: feature:621710-621825:-1:exon
so has part: feature:621433-621555:-1:exon
so has part: feature:620849-620958:-1:exon
so has part: feature:620342-620458:-1:exon
so has part: feature:619787-619985:-1:exon
so has part: feature:619050-619258:-1:exon
so has part: feature:617903-618079:-1:exon
so has part: feature:617174-617384:-1:exon
so has part: feature:616691-616824:-1:exon
so has part: feature:616079-616199:-1:exon
so has part: feature:615709-615758:-1:exon
so has part: feature:614654-614761:-1:exon
so has part: feature:614370-614425:-1:exon
so has part: feature:614137-614224:-1:exon
so has part: feature:613776-613895:-1:exon
so has part: feature:613125-613222:-1:exon
so has part: feature:612871-612989:-1:exon
so has part: feature:612555-612688:-1:exon
so has part: feature:612333-612417:-1:exon
so has part: feature:611988-612126:-1:exon
so has part: feature:611583-611628:-1:exon

XP_030823031.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:623617-623760:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:622665-622755:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:621913-622024:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:621710-621825:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:621433-621555:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:620849-620958:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:620342-620458:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:619787-619985:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:619050-619258:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:617903-618079:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:617174-617384:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:616691-616824:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:616079-616199:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:615709-615758:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:614654-614761:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:614370-614425:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:614137-614224:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:613776-613895:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:613125-613222:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:612871-612989:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:612555-612688:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:612333-612417:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:611988-612126:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:611583-611628:-1:exon

HDAC7
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 87175
gene: HDAC7
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: histone deacetylase 7 isoform X3
translation: MDLRIGQRLLKPQDTALLALKQQQLQHQLFLASLHQQQVEQLTHQHVRVAMESPHREAEPGQQEQELRQILNKDKSKRSAVASTVVKQKLAEVILKKQQAALERTSNAPAAALPYRSLEPLEPEGPSPAMLSTFLSPVPSTSLDTPEHFPLRKTASEPNLKVRCKPRKCLERRKNPLTRKESAPPSLKRRPPDAIDSSPSSSSTPVSGCSSPNDSLPAEHAALPAAPGGAHEAPLAQRLLMQESSLAQFALQSAASLPAITLGLPATTGARGDTERRALPSLAHRVPVLNGPVLPGSHQPVFIPASLEQHEAGSALSPRLQPVIILEPSVTHAPLVAVPGLGAVPFSFAPSLVPAERLALPGQHKPLGRTRSEPLPPSPRAVQQHLLFQQHHAHFLERLKQQTHLGKRMAKSSEKPRLRQIPSSEDMEAEGSVPEAAAEAAEPSRARPGSSGKEMGQPQEELVLQQALLWDSFQRVQQQLLKRQPLADPPVLPPGHRPLSRAQSSPATATVSLPAQDTKALALPVQEQPPKPHFTTGLVYDSVMLKHQCSCGDNSNHPEHAGRIQSIWSRLQERGLRSRCECLRGRKATLEELQCVHSERHVLLYGTNPLNRLKLDNGKLAGILSQRTFVMLPCGGVGVDSDTIWNELHSSNAARWAAGSVTELAFKVATRELKNGFAVVRPPGHHADPSTAMGFCFFNSVAIAARQLQQKGKLSKILIVDWDVHHGNGTQQIFYRDPEVLYISLHRHDDGNFFPGSGAADEVGAGPGEGFNVNVAWAGGLDPPMGDPEYLAAFRTVVMPIAHEFCPDVVLVSAGFDAAEGHPPPLGGYKVSAKCFGYMTKQLMSLAGGAVVLALEGGHDLTAICDASEACVSALLGHEPEPLPEDSLRQKPNANAVRSLEAVIQVQSRYWVAVQRFASKLGCSFLEAQHHEADEVETVTALASLSVAVMVEKRAQEEPMEQEEPMNQ
SIO_010081: HDAC7
subclass of: SO_0000673
so part of: HDAC7
location: complement(join(611583..611628,611988..612126,612333..612417,612555..612688,612871..612989,613125..613222,613776..613895,614137..614224,614370..614425,614654..614761,615709..615758,616079..616199,616691..616824,617174..617384,617903..618079,619050..619258,619787..619985,620342..620458,620849..620958,621433..621555,621710..621825,621913..622024,622665..622755,623617..623760))
location: region:611583-623760:-1
so has part: feature:623617-623760:-1:exon
so has part: feature:622665-622755:-1:exon
so has part: feature:621913-622024:-1:exon
so has part: feature:621710-621825:-1:exon
so has part: feature:621433-621555:-1:exon
so has part: feature:620849-620958:-1:exon
so has part: feature:620342-620458:-1:exon
so has part: feature:619787-619985:-1:exon
so has part: feature:619050-619258:-1:exon
so has part: feature:617903-618079:-1:exon
so has part: feature:617174-617384:-1:exon
so has part: feature:616691-616824:-1:exon
so has part: feature:616079-616199:-1:exon
so has part: feature:615709-615758:-1:exon
so has part: feature:614654-614761:-1:exon
so has part: feature:614370-614425:-1:exon
so has part: feature:614137-614224:-1:exon
so has part: feature:613776-613895:-1:exon
so has part: feature:613125-613222:-1:exon
so has part: feature:612871-612989:-1:exon
so has part: feature:612555-612688:-1:exon
so has part: feature:612333-612417:-1:exon
so has part: feature:611988-612126:-1:exon
so has part: feature:611583-611628:-1:exon

XP_030823032.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:623617-623760:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:622665-622755:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:621913-622024:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:621710-621825:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:621433-621555:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:620849-620958:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:620342-620458:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:619787-619985:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:619050-619258:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:617903-618079:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:617174-617384:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:616691-616824:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:616079-616199:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:615709-615758:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:614654-614761:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:614370-614425:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:614137-614224:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:613776-613895:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:613125-613222:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:612871-612989:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:612555-612688:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:612333-612417:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:611988-612126:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:611583-611628:-1:exon

LOC115914458
type: Gene
subclass of: SO_0000704
RO_0002162: 87175
gene: LOC115914458
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 683461..686330
location: region:683461-686330:1
so has part: feature:683461-686330:1:exon
subclass of: SO_0000010

115914458
type: Gene
SIO_000068: ncbigene

position:683461:1
position: 683461
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:686330:1
position: 686330
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:683461-686330:1:exon

LOC115914458
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 87175
gene: LOC115914458
product: interferon-induced protein with tetratricopeptide repeats 1-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 82% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_030966984.1
SIO_010081: LOC115914458
subclass of: SO_0000673
so part of: LOC115914458
location: join(683461..683505,683772..683842,684705..686330)
location: region:683461-686330:1
so has part: feature:683461-683505:1:exon
so has part: feature:683772-683842:1:exon
so has part: feature:684705-686330:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:683461-683505:1:exon

position:683505:1
position: 683505
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:683772-683842:1:exon

position:683772:1
position: 683772
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:683842:1
position: 683842
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:684705-686330:1:exon

position:684705:1
position: 684705
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC115914458
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 87175
gene: LOC115914458
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: interferon-induced protein with tetratricopeptide repeats 1-like
translation: MPCFHSDGSSIALHQDLLLGGRTKPSSLDSDMMAAGKLSQERLKEKLDALQCHFTWKMDVDSFSLWHLLQKLAVEIKHTAHQNQGALLGLQAYLHQMNKQSKEALQSLKAAEEHNDEKDLPTSTAGSLIIYGNYAWIHYLQGSYQEAEIYQERAKKLCPTPWDVRLIPHIQALKGWSLLAIRARNGGRARECFNTALMLEPENSSFRTGLAMALYSSWNFSWQPDIEREARIQLERIVNEQPENYRAKIYLAKLLKQVDREKSIALAKECAERSSDPEVLKLAALFWMPLSTERAFQIIQQALQQDPGYHLLYQALANCYKQRWLKADHKESDKIRCKAIKDLQQIVQEHPDLDLTLVKLQLAEFIGVKKPAQEEKIYEELQKKIDTLSLRCRQALNLFWGDFFCNREKCKASAKAKFMECYKIPVQTDQRRECGHRLLKMAETYQHNGDADTANDIHRFLQEADKHLPREPAVLGLDDEDHPIPQRIGQDFSQG
SIO_010081: LOC115914458
subclass of: SO_0000673
so part of: LOC115914458
location: join(683461..683505,683772..683842,684705..686076)
location: region:683461-686076:1
so has part: feature:683461-683505:1:exon
so has part: feature:683772-683842:1:exon
so has part: feature:684705-686076:1:exon

XP_030822844.1
type: Protein
SIO_000068: ncbiprotein

position:686076:1
position: 686076
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:683461-683505:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:683772-683842:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:684705-686076:1:exon

RACGAP1
type: Gene
subclass of: SO_0000704
RO_0002162: 87175
gene: RACGAP1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(687534..695878)
location: region:687534-695878:-1
so has part: feature:687534-695878:-1:exon
subclass of: SO_0000010

115914586
type: Gene
SIO_000068: ncbigene

position:687534:-1
position: 687534
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:695878:-1
position: 695878
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:687534-695878:-1:exon

RACGAP1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 87175
gene: RACGAP1
product: Rac GTPase activating protein 1, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 ESTs, 15 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XM_030967183.1
SIO_010081: RACGAP1
subclass of: SO_0000673
so part of: RACGAP1
location: complement(join(687534..688439,688733..688841,689072..689207,689292..689424,689678..689783,690041..690239,690421..690516,690934..691098,691525..691655,691812..691929,692048..692125,692829..692882,693097..693166,693366..693502,693839..694041,694568..694656,695818..695878))
location: region:687534-695878:-1
so has part: feature:695818-695878:-1:exon
so has part: feature:694568-694656:-1:exon
so has part: feature:693839-694041:-1:exon
so has part: feature:693366-693502:-1:exon
so has part: feature:693097-693166:-1:exon
so has part: feature:692829-692882:-1:exon
so has part: feature:692048-692125:-1:exon
so has part: feature:691812-691929:-1:exon
so has part: feature:691525-691655:-1:exon
so has part: feature:690934-691098:-1:exon
so has part: feature:690421-690516:-1:exon
so has part: feature:690041-690239:-1:exon
so has part: feature:689678-689783:-1:exon
so has part: feature:689292-689424:-1:exon
so has part: feature:689072-689207:-1:exon
so has part: feature:688733-688841:-1:exon
so has part: feature:687534-688439:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:695818-695878:-1:exon

position:695818:-1
position: 695818
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:694568-694656:-1:exon

position:694568:-1
position: 694568
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:694656:-1
position: 694656
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:693839-694041:-1:exon

position:693839:-1
position: 693839
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:694041:-1
position: 694041
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:693366-693502:-1:exon

position:693366:-1
position: 693366
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:693502:-1
position: 693502
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:693097-693166:-1:exon

position:693097:-1
position: 693097
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:693166:-1
position: 693166
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:692829-692882:-1:exon

position:692829:-1
position: 692829
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:692882:-1
position: 692882
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:692048-692125:-1:exon

position:692048:-1
position: 692048
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:692125:-1
position: 692125
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:691812-691929:-1:exon

position:691812:-1
position: 691812
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:691929:-1
position: 691929
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:691525-691655:-1:exon

position:691525:-1
position: 691525
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:691655:-1
position: 691655
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:690934-691098:-1:exon

position:690934:-1
position: 690934
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:691098:-1
position: 691098
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:690421-690516:-1:exon

position:690421:-1
position: 690421
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:690516:-1
position: 690516
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:690041-690239:-1:exon

position:690041:-1
position: 690041
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:690239:-1
position: 690239
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:689678-689783:-1:exon

position:689678:-1
position: 689678
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:689783:-1
position: 689783
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:689292-689424:-1:exon

position:689292:-1
position: 689292
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:689424:-1
position: 689424
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:689072-689207:-1:exon

position:689072:-1
position: 689072
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:689207:-1
position: 689207
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:688733-688841:-1:exon

position:688733:-1
position: 688733
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:688841:-1
position: 688841
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:687534-688439:-1:exon

position:688439:-1
position: 688439
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

RACGAP1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 87175
gene: RACGAP1
product: Rac GTPase activating protein 1, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_030967185.1
SIO_010081: RACGAP1
subclass of: SO_0000673
so part of: RACGAP1
location: complement(join(687534..688439,688733..688841,689072..689207,689292..689424,689678..689783,690041..690239,690421..690516,690949..691098,691525..691655,691812..691929,692048..692125,692829..692882,693097..693166,693366..693502,693839..694041,694568..694656,695784..695878))
location: region:687534-695878:-1
so has part: feature:695784-695878:-1:exon
so has part: feature:694568-694656:-1:exon
so has part: feature:693839-694041:-1:exon
so has part: feature:693366-693502:-1:exon
so has part: feature:693097-693166:-1:exon
so has part: feature:692829-692882:-1:exon
so has part: feature:692048-692125:-1:exon
so has part: feature:691812-691929:-1:exon
so has part: feature:691525-691655:-1:exon
so has part: feature:690949-691098:-1:exon
so has part: feature:690421-690516:-1:exon
so has part: feature:690041-690239:-1:exon
so has part: feature:689678-689783:-1:exon
so has part: feature:689292-689424:-1:exon
so has part: feature:689072-689207:-1:exon
so has part: feature:688733-688841:-1:exon
so has part: feature:687534-688439:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:695784-695878:-1:exon

position:695784:-1
position: 695784
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:694568-694656:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:693839-694041:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:693366-693502:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:693097-693166:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:692829-692882:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:692048-692125:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:691812-691929:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:691525-691655:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:690949-691098:-1:exon

position:690949:-1
position: 690949
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:690421-690516:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:690041-690239:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:689678-689783:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:689292-689424:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:689072-689207:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:688733-688841:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:687534-688439:-1:exon

RACGAP1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 87175
gene: RACGAP1
product: Rac GTPase activating protein 1, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 ESTs, 15 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XM_030967182.1
SIO_010081: RACGAP1
subclass of: SO_0000673
so part of: RACGAP1
location: complement(join(687534..688439,688733..688841,689072..689207,689292..689424,689678..689783,690041..690239,690421..690516,690934..691098,691525..691655,691812..691929,692048..692125,692829..692882,693097..693166,693366..693502,693839..694041,694568..694656,695784..695878))
location: region:687534-695878:-1
so has part: feature:695784-695878:-1:exon
so has part: feature:694568-694656:-1:exon
so has part: feature:693839-694041:-1:exon
so has part: feature:693366-693502:-1:exon
so has part: feature:693097-693166:-1:exon
so has part: feature:692829-692882:-1:exon
so has part: feature:692048-692125:-1:exon
so has part: feature:691812-691929:-1:exon
so has part: feature:691525-691655:-1:exon
so has part: feature:690934-691098:-1:exon
so has part: feature:690421-690516:-1:exon
so has part: feature:690041-690239:-1:exon
so has part: feature:689678-689783:-1:exon
so has part: feature:689292-689424:-1:exon
so has part: feature:689072-689207:-1:exon
so has part: feature:688733-688841:-1:exon
so has part: feature:687534-688439:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:695784-695878:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:694568-694656:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:693839-694041:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:693366-693502:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:693097-693166:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:692829-692882:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:692048-692125:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:691812-691929:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:691525-691655:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:690934-691098:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:690421-690516:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:690041-690239:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:689678-689783:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:689292-689424:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:689072-689207:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:688733-688841:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:687534-688439:-1:exon

RACGAP1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 87175
gene: RACGAP1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: rac GTPase-activating protein 1 isoform X2
translation: MEIAMVNLRGLFEQLTRQAELLSEGNECQFIQLAKNFEENRRKWQKLEQELCRYKDLLMKTEAERSALDVKLKHARNQVDVEIKRRQKAEMDCEKLERQIQLIRELLMCDGSGSIQLSEEQKSVLAFLNRPQPSVGSAGNKRLSTIDESGSILSDISFDKSDDSLDWDSSVVKAVRLKRREKRRSSRQFAEGPPAPQKKSRSISSSADQANESIVAKTTVMVPNDGGPIEAISTIQTVPYPRRSRRKSGPLQPWNSESSIGSKQLESKQDTDGSSTPQHNGGVRLHDFVSKTVIKPESCVPCGKRVKFGKISLKCRDCRVVAHPECRERCPLPCIPTLTGTPGTLMDFVPSTPPMIPSIIVHCVNEIEQRGLHETGIYRISGCDKTVRELKEKFLRAKSIPLLSKVDDIHAICGLLKDFLRSLKEPLLTFRLNKTFMEAAEIPDEDNSIAAMYQAVGELPQANRDTLAFLMVHLQRVAQSPDTKMDISNLAKVFGPTIVAHAVPDPDPMTLLQDTKRQPKVVERLLLLPMDYWSQLMMVEQENIDPAHVIENTNAYSTPRTPEVQVSILGPLTTPEHQLSKTPSSSSLSQRVRSTFSKTTPKFGSKSKSTTQFGHQGNFFASPMLK
SIO_010081: RACGAP1
subclass of: SO_0000673
so part of: RACGAP1
location: complement(join(688364..688439,688733..688841,689072..689207,689292..689424,689678..689783,690041..690239,690421..690516,690949..691098,691525..691655,691812..691929,692048..692125,692829..692882,693097..693166,693366..693502,693839..694041,694568..694652))
location: region:688364-694652:-1
so has part: feature:694568-694652:-1:exon
so has part: feature:693839-694041:-1:exon
so has part: feature:693366-693502:-1:exon
so has part: feature:693097-693166:-1:exon
so has part: feature:692829-692882:-1:exon
so has part: feature:692048-692125:-1:exon
so has part: feature:691812-691929:-1:exon
so has part: feature:691525-691655:-1:exon
so has part: feature:690949-691098:-1:exon
so has part: feature:690421-690516:-1:exon
so has part: feature:690041-690239:-1:exon
so has part: feature:689678-689783:-1:exon
so has part: feature:689292-689424:-1:exon
so has part: feature:689072-689207:-1:exon
so has part: feature:688733-688841:-1:exon
so has part: feature:688364-688439:-1:exon

XP_030823045.1
type: Protein
SIO_000068: ncbiprotein

position:688364:-1
position: 688364
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:694652:-1
position: 694652
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:694568-694652:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:693839-694041:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:693366-693502:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:693097-693166:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:692829-692882:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:692048-692125:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:691812-691929:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:691525-691655:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:690949-691098:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:690421-690516:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:690041-690239:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:689678-689783:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:689292-689424:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:689072-689207:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:688733-688841:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:688364-688439:-1:exon

RACGAP1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 87175
gene: RACGAP1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: rac GTPase-activating protein 1 isoform X1
translation: MEIAMVNLRGLFEQLTRQAELLSEGNECQFIQLAKNFEENRRKWQKLEQELCRYKDLLMKTEAERSALDVKLKHARNQVDVEIKRRQKAEMDCEKLERQIQLIRELLMCDGSGSIQLSEEQKSVLAFLNRPQPSVGSAGNKRLSTIDESGSILSDISFDKSDDSLDWDSSVVKAVRLKRREKRRSSRQFAEGPPAPQKKSRSISSSADQANESIVAKTTVMVPNDGGPIEAISTIQTVPYPRRSRRKSGPLQPWNSESSIGSKQLESKQDTDGSSTPQHNGGVRLHDFVSKTVIKPESCVPCGKRVKFGKISLKCRDCRVVAHPECRERCPLPCIPTLTGTPVRIGEGTLMDFVPSTPPMIPSIIVHCVNEIEQRGLHETGIYRISGCDKTVRELKEKFLRAKSIPLLSKVDDIHAICGLLKDFLRSLKEPLLTFRLNKTFMEAAEIPDEDNSIAAMYQAVGELPQANRDTLAFLMVHLQRVAQSPDTKMDISNLAKVFGPTIVAHAVPDPDPMTLLQDTKRQPKVVERLLLLPMDYWSQLMMVEQENIDPAHVIENTNAYSTPRTPEVQVSILGPLTTPEHQLSKTPSSSSLSQRVRSTFSKTTPKFGSKSKSTTQFGHQGNFFASPMLK
SIO_010081: RACGAP1
subclass of: SO_0000673
so part of: RACGAP1
location: complement(join(688364..688439,688733..688841,689072..689207,689292..689424,689678..689783,690041..690239,690421..690516,690934..691098,691525..691655,691812..691929,692048..692125,692829..692882,693097..693166,693366..693502,693839..694041,694568..694652))
location: region:688364-694652:-1
so has part: feature:694568-694652:-1:exon
so has part: feature:693839-694041:-1:exon
so has part: feature:693366-693502:-1:exon
so has part: feature:693097-693166:-1:exon
so has part: feature:692829-692882:-1:exon
so has part: feature:692048-692125:-1:exon
so has part: feature:691812-691929:-1:exon
so has part: feature:691525-691655:-1:exon
so has part: feature:690934-691098:-1:exon
so has part: feature:690421-690516:-1:exon
so has part: feature:690041-690239:-1:exon
so has part: feature:689678-689783:-1:exon
so has part: feature:689292-689424:-1:exon
so has part: feature:689072-689207:-1:exon
so has part: feature:688733-688841:-1:exon
so has part: feature:688364-688439:-1:exon

XP_030823042.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:694568-694652:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:693839-694041:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:693366-693502:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:693097-693166:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:692829-692882:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:692048-692125:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:691812-691929:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:691525-691655:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:690934-691098:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:690421-690516:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:690041-690239:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:689678-689783:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:689292-689424:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:689072-689207:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:688733-688841:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:688364-688439:-1:exon

RACGAP1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 87175
gene: RACGAP1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: rac GTPase-activating protein 1 isoform X1
translation: MEIAMVNLRGLFEQLTRQAELLSEGNECQFIQLAKNFEENRRKWQKLEQELCRYKDLLMKTEAERSALDVKLKHARNQVDVEIKRRQKAEMDCEKLERQIQLIRELLMCDGSGSIQLSEEQKSVLAFLNRPQPSVGSAGNKRLSTIDESGSILSDISFDKSDDSLDWDSSVVKAVRLKRREKRRSSRQFAEGPPAPQKKSRSISSSADQANESIVAKTTVMVPNDGGPIEAISTIQTVPYPRRSRRKSGPLQPWNSESSIGSKQLESKQDTDGSSTPQHNGGVRLHDFVSKTVIKPESCVPCGKRVKFGKISLKCRDCRVVAHPECRERCPLPCIPTLTGTPVRIGEGTLMDFVPSTPPMIPSIIVHCVNEIEQRGLHETGIYRISGCDKTVRELKEKFLRAKSIPLLSKVDDIHAICGLLKDFLRSLKEPLLTFRLNKTFMEAAEIPDEDNSIAAMYQAVGELPQANRDTLAFLMVHLQRVAQSPDTKMDISNLAKVFGPTIVAHAVPDPDPMTLLQDTKRQPKVVERLLLLPMDYWSQLMMVEQENIDPAHVIENTNAYSTPRTPEVQVSILGPLTTPEHQLSKTPSSSSLSQRVRSTFSKTTPKFGSKSKSTTQFGHQGNFFASPMLK
SIO_010081: RACGAP1
subclass of: SO_0000673
so part of: RACGAP1
location: complement(join(688364..688439,688733..688841,689072..689207,689292..689424,689678..689783,690041..690239,690421..690516,690934..691098,691525..691655,691812..691929,692048..692125,692829..692882,693097..693166,693366..693502,693839..694041,694568..694652))
location: region:688364-694652:-1
so has part: feature:694568-694652:-1:exon
so has part: feature:693839-694041:-1:exon
so has part: feature:693366-693502:-1:exon
so has part: feature:693097-693166:-1:exon
so has part: feature:692829-692882:-1:exon
so has part: feature:692048-692125:-1:exon
so has part: feature:691812-691929:-1:exon
so has part: feature:691525-691655:-1:exon
so has part: feature:690934-691098:-1:exon
so has part: feature:690421-690516:-1:exon
so has part: feature:690041-690239:-1:exon
so has part: feature:689678-689783:-1:exon
so has part: feature:689292-689424:-1:exon
so has part: feature:689072-689207:-1:exon
so has part: feature:688733-688841:-1:exon
so has part: feature:688364-688439:-1:exon

XP_030823043.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:694568-694652:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:693839-694041:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:693366-693502:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:693097-693166:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:692829-692882:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:692048-692125:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:691812-691929:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:691525-691655:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:690934-691098:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:690421-690516:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:690041-690239:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:689678-689783:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:689292-689424:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:689072-689207:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:688733-688841:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:688364-688439:-1:exon

ASIC1
type: Gene
subclass of: SO_0000704
RO_0002162: 87175
gene: ASIC1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 708848..726366
location: region:708848-726366:1
so has part: feature:708848-726366:1:exon
subclass of: SO_0000010

115914588
type: Gene
SIO_000068: ncbigene

position:708848:1
position: 708848
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:726366:1
position: 726366
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:708848-726366:1:exon

ASIC1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 87175
gene: ASIC1
product: acid sensing ion channel subunit 1, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 mRNAs, 7 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_030967189.1
SIO_010081: ASIC1
subclass of: SO_0000673
so part of: ASIC1
location: join(708848..709337,709739..710133,710961..711156,723472..723622,724103..724230,724418..724568,724648..724704,724788..724941,725030..725121,725380..725459,725553..725657,725918..726366)
location: region:708848-726366:1
so has part: feature:708848-709337:1:exon
so has part: feature:709739-710133:1:exon
so has part: feature:710961-711156:1:exon
so has part: feature:723472-723622:1:exon
so has part: feature:724103-724230:1:exon
so has part: feature:724418-724568:1:exon
so has part: feature:724648-724704:1:exon
so has part: feature:724788-724941:1:exon
so has part: feature:725030-725121:1:exon
so has part: feature:725380-725459:1:exon
so has part: feature:725553-725657:1:exon
so has part: feature:725918-726366:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:708848-709337:1:exon

position:709337:1
position: 709337
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:709739-710133:1:exon

position:709739:1
position: 709739
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:710133:1
position: 710133
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:710961-711156:1:exon

position:710961:1
position: 710961
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:711156:1
position: 711156
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:723472-723622:1:exon

position:723472:1
position: 723472
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:723622:1
position: 723622
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:724103-724230:1:exon

position:724103:1
position: 724103
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:724230:1
position: 724230
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:724418-724568:1:exon

position:724418:1
position: 724418
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:724568:1
position: 724568
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:724648-724704:1:exon

position:724648:1
position: 724648
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:724704:1
position: 724704
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:724788-724941:1:exon

position:724788:1
position: 724788
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:724941:1
position: 724941
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:725030-725121:1:exon

position:725030:1
position: 725030
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:725121:1
position: 725121
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:725380-725459:1:exon

position:725380:1
position: 725380
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:725459:1
position: 725459
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:725553-725657:1:exon

position:725553:1
position: 725553
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:725657:1
position: 725657
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:725918-726366:1:exon

position:725918:1
position: 725918
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

ASIC1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 87175
gene: ASIC1
product: acid sensing ion channel subunit 1, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 mRNAs, 7 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_030967190.1
SIO_010081: ASIC1
subclass of: SO_0000673
so part of: ASIC1
location: join(708848..709148,709268..709337,709736..710133,710961..711156,723472..723622,724103..724230,724418..724568,724648..724704,724788..724941,725030..725121,725380..725459,725553..725657,725918..726366)
location: region:708848-726366:1
so has part: feature:708848-709148:1:exon
so has part: feature:709268-709337:1:exon
so has part: feature:709736-710133:1:exon
so has part: feature:710961-711156:1:exon
so has part: feature:723472-723622:1:exon
so has part: feature:724103-724230:1:exon
so has part: feature:724418-724568:1:exon
so has part: feature:724648-724704:1:exon
so has part: feature:724788-724941:1:exon
so has part: feature:725030-725121:1:exon
so has part: feature:725380-725459:1:exon
so has part: feature:725553-725657:1:exon
so has part: feature:725918-726366:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:708848-709148:1:exon

position:709148:1
position: 709148
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:709268-709337:1:exon

position:709268:1
position: 709268
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:709736-710133:1:exon

position:709736:1
position: 709736
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:710961-711156:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:723472-723622:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:724103-724230:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:724418-724568:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:724648-724704:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:724788-724941:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:725030-725121:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:725380-725459:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:725553-725657:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:725918-726366:1:exon

ASIC1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 87175
gene: ASIC1
product: acid sensing ion channel subunit 1, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 mRNAs, 7 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_030967191.1
SIO_010081: ASIC1
subclass of: SO_0000673
so part of: ASIC1
location: join(708848..708981,709199..709337,709739..710133,710961..711156,723472..723622,724103..724230,724418..724568,724648..724704,724788..724941,725030..725121,725380..725459,725553..725657,725918..726366)
location: region:708848-726366:1
so has part: feature:708848-708981:1:exon
so has part: feature:709199-709337:1:exon
so has part: feature:709739-710133:1:exon
so has part: feature:710961-711156:1:exon
so has part: feature:723472-723622:1:exon
so has part: feature:724103-724230:1:exon
so has part: feature:724418-724568:1:exon
so has part: feature:724648-724704:1:exon
so has part: feature:724788-724941:1:exon
so has part: feature:725030-725121:1:exon
so has part: feature:725380-725459:1:exon
so has part: feature:725553-725657:1:exon
so has part: feature:725918-726366:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:708848-708981:1:exon

position:708981:1
position: 708981
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:709199-709337:1:exon

position:709199:1
position: 709199
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:709739-710133:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:710961-711156:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:723472-723622:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:724103-724230:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:724418-724568:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:724648-724704:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:724788-724941:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:725030-725121:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:725380-725459:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:725553-725657:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:725918-726366:1:exon

ASIC1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 87175
gene: ASIC1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: acid-sensing ion channel 1
translation: MMDLKVDEEEVDSGQPVSIQAFASSSTLHGLSHIFSYERLSLKRVVWALCFLGSLALLALVCTNRIQYYFLYPHVTKLDEVAATRLTFPAVTFCNLNEFRFSRVTKNDLYHAGELLALLNNRYEIPDIQTADEKQLEILQDKANFRNFKPKPFNMLEFYDRAGHDIREMLLSCFFRGEQCTPEDFKVVFTRYGKCYTFNAGQDGKPRLITMKGGTGNGLEIMLDIQQDEYLPVWGETDETSFEAGIKVQIHSQDEPPLIDQLGFGVAPGFQTFVSCQEQRLIYLPPPWGDCKAVAGDSEFYDTYSITACRIDCETRYLVENCNCRMVHMPGDAPYCTPEQYKECADPALDFLVEKDNEYCICEMPCNMTRYGKELSMVKIPSKASAKYLAKKYNKSEQYIGENILVLDIFFEALNYETIEQKKAYEVAGLLGDIGGQMGLFIGASILTVLELFDYAYEVIKHRLCRRGKCRKNHKRNNTDKGVALSMDDVKRHNPCESIRGHPAGMTYAANILPHHPARGTFEDFTC
SIO_010081: ASIC1
subclass of: SO_0000673
so part of: ASIC1
location: join(709769..710133,710961..711156,723472..723622,724103..724230,724418..724568,724648..724704,724788..724941,725030..725121,725380..725459,725553..725657,725918..726022)
location: region:709769-726022:1
so has part: feature:709769-710133:1:exon
so has part: feature:710961-711156:1:exon
so has part: feature:723472-723622:1:exon
so has part: feature:724103-724230:1:exon
so has part: feature:724418-724568:1:exon
so has part: feature:724648-724704:1:exon
so has part: feature:724788-724941:1:exon
so has part: feature:725030-725121:1:exon
so has part: feature:725380-725459:1:exon
so has part: feature:725553-725657:1:exon
so has part: feature:725918-726022:1:exon

XP_030823049.1
type: Protein
SIO_000068: ncbiprotein

position:709769:1
position: 709769
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:726022:1
position: 726022
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:709769-710133:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:710961-711156:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:723472-723622:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:724103-724230:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:724418-724568:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:724648-724704:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:724788-724941:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:725030-725121:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:725380-725459:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:725553-725657:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:725918-726022:1:exon

ASIC1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 87175
gene: ASIC1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: acid-sensing ion channel 1
translation: MMDLKVDEEEVDSGQPVSIQAFASSSTLHGLSHIFSYERLSLKRVVWALCFLGSLALLALVCTNRIQYYFLYPHVTKLDEVAATRLTFPAVTFCNLNEFRFSRVTKNDLYHAGELLALLNNRYEIPDIQTADEKQLEILQDKANFRNFKPKPFNMLEFYDRAGHDIREMLLSCFFRGEQCTPEDFKVVFTRYGKCYTFNAGQDGKPRLITMKGGTGNGLEIMLDIQQDEYLPVWGETDETSFEAGIKVQIHSQDEPPLIDQLGFGVAPGFQTFVSCQEQRLIYLPPPWGDCKAVAGDSEFYDTYSITACRIDCETRYLVENCNCRMVHMPGDAPYCTPEQYKECADPALDFLVEKDNEYCICEMPCNMTRYGKELSMVKIPSKASAKYLAKKYNKSEQYIGENILVLDIFFEALNYETIEQKKAYEVAGLLGDIGGQMGLFIGASILTVLELFDYAYEVIKHRLCRRGKCRKNHKRNNTDKGVALSMDDVKRHNPCESIRGHPAGMTYAANILPHHPARGTFEDFTC
SIO_010081: ASIC1
subclass of: SO_0000673
so part of: ASIC1
location: join(709769..710133,710961..711156,723472..723622,724103..724230,724418..724568,724648..724704,724788..724941,725030..725121,725380..725459,725553..725657,725918..726022)
location: region:709769-726022:1
so has part: feature:709769-710133:1:exon
so has part: feature:710961-711156:1:exon
so has part: feature:723472-723622:1:exon
so has part: feature:724103-724230:1:exon
so has part: feature:724418-724568:1:exon
so has part: feature:724648-724704:1:exon
so has part: feature:724788-724941:1:exon
so has part: feature:725030-725121:1:exon
so has part: feature:725380-725459:1:exon
so has part: feature:725553-725657:1:exon
so has part: feature:725918-726022:1:exon

XP_030823050.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:709769-710133:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:710961-711156:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:723472-723622:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:724103-724230:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:724418-724568:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:724648-724704:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:724788-724941:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:725030-725121:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:725380-725459:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:725553-725657:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:725918-726022:1:exon

ASIC1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 87175
gene: ASIC1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: acid-sensing ion channel 1
translation: MMDLKVDEEEVDSGQPVSIQAFASSSTLHGLSHIFSYERLSLKRVVWALCFLGSLALLALVCTNRIQYYFLYPHVTKLDEVAATRLTFPAVTFCNLNEFRFSRVTKNDLYHAGELLALLNNRYEIPDIQTADEKQLEILQDKANFRNFKPKPFNMLEFYDRAGHDIREMLLSCFFRGEQCTPEDFKVVFTRYGKCYTFNAGQDGKPRLITMKGGTGNGLEIMLDIQQDEYLPVWGETDETSFEAGIKVQIHSQDEPPLIDQLGFGVAPGFQTFVSCQEQRLIYLPPPWGDCKAVAGDSEFYDTYSITACRIDCETRYLVENCNCRMVHMPGDAPYCTPEQYKECADPALDFLVEKDNEYCICEMPCNMTRYGKELSMVKIPSKASAKYLAKKYNKSEQYIGENILVLDIFFEALNYETIEQKKAYEVAGLLGDIGGQMGLFIGASILTVLELFDYAYEVIKHRLCRRGKCRKNHKRNNTDKGVALSMDDVKRHNPCESIRGHPAGMTYAANILPHHPARGTFEDFTC
SIO_010081: ASIC1
subclass of: SO_0000673
so part of: ASIC1
location: join(709769..710133,710961..711156,723472..723622,724103..724230,724418..724568,724648..724704,724788..724941,725030..725121,725380..725459,725553..725657,725918..726022)
location: region:709769-726022:1
so has part: feature:709769-710133:1:exon
so has part: feature:710961-711156:1:exon
so has part: feature:723472-723622:1:exon
so has part: feature:724103-724230:1:exon
so has part: feature:724418-724568:1:exon
so has part: feature:724648-724704:1:exon
so has part: feature:724788-724941:1:exon
so has part: feature:725030-725121:1:exon
so has part: feature:725380-725459:1:exon
so has part: feature:725553-725657:1:exon
so has part: feature:725918-726022:1:exon

XP_030823051.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:709769-710133:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:710961-711156:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:723472-723622:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:724103-724230:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:724418-724568:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:724648-724704:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:724788-724941:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:725030-725121:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:725380-725459:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:725553-725657:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:725918-726022:1:exon

SMARCD1
type: Gene
subclass of: SO_0000704
RO_0002162: 87175
gene: SMARCD1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 730375..737062
location: region:730375-737062:1
so has part: feature:730375-737062:1:exon
subclass of: SO_0000010

115914589
type: Gene
SIO_000068: ncbigene

position:730375:1
position: 730375
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:737062:1
position: 737062
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:730375-737062:1:exon

SMARCD1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 87175
gene: SMARCD1
product: SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1
exception: unclassified transcription discrepancy
note: The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: deleted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 ESTs, 14 Proteins, and 94% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_030967192.1
SIO_010081: SMARCD1
subclass of: SO_0000673
so part of: SMARCD1
location: join(730375..730540,730615..730802,731566..731608,731693..731815,732061..732183,732666..732782,733103..733204,733501..733662,733779..733876,734324..734459,734785..734907,735147..735248,735434..737062)
location: region:730375-737062:1
so has part: feature:730375-730540:1:exon
so has part: feature:730615-730802:1:exon
so has part: feature:731566-731608:1:exon
so has part: feature:731693-731815:1:exon
so has part: feature:732061-732183:1:exon
so has part: feature:732666-732782:1:exon
so has part: feature:733103-733204:1:exon
so has part: feature:733501-733662:1:exon
so has part: feature:733779-733876:1:exon
so has part: feature:734324-734459:1:exon
so has part: feature:734785-734907:1:exon
so has part: feature:735147-735248:1:exon
so has part: feature:735434-737062:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:730375-730540:1:exon

position:730540:1
position: 730540
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:730615-730802:1:exon

position:730615:1
position: 730615
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:730802:1
position: 730802
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:731566-731608:1:exon

position:731566:1
position: 731566
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:731608:1
position: 731608
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:731693-731815:1:exon

position:731693:1
position: 731693
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:731815:1
position: 731815
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:732061-732183:1:exon

position:732061:1
position: 732061
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:732183:1
position: 732183
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:732666-732782:1:exon

position:732666:1
position: 732666
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:732782:1
position: 732782
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:733103-733204:1:exon

position:733103:1
position: 733103
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:733204:1
position: 733204
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:733501-733662:1:exon

position:733501:1
position: 733501
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:733662:1
position: 733662
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:733779-733876:1:exon

position:733779:1
position: 733779
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:733876:1
position: 733876
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:734324-734459:1:exon

position:734324:1
position: 734324
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:734459:1
position: 734459
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:734785-734907:1:exon

position:734785:1
position: 734785
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:734907:1
position: 734907
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:735147-735248:1:exon

position:735147:1
position: 735147
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:735248:1
position: 735248
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:735434-737062:1:exon

position:735434:1
position: 735434
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

SMARCD1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 87175
gene: SMARCD1
exception: unclassified translation discrepancy
note: The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: deleted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: LOW QUALITY PROTEIN: SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 1
translation: MAARAGFQSGPASGGGAGAAPGAALGPGAPGGAVRMGPAPGQGLYRSPLPGAAYPRPGMLPGGRLAPQGPAMGPPGYGGSPAVRPALAQAGLDQARKRPAPQQLQQVQPQAVPNRNHNAKKKKMADKILPQRIRELVPESQAYMDLLAFERKLDQTIMRKRLDIQEALKRPIKQKRKLRIFISNTFNPAKSDAEDGEGTVASWELRVEGRLLEDSALSKYDATKQKRKFSSFFKSLVIELDKDLYGPDNHLVEWHRTATTQETDGFQVKRPGDVNVRCTVLLMLDYQPPQFKLDPRLARLLGIHTQTRPVIIQALWQYIKTHKLQDPHEREFVICDKYLQQIFESQRMKFSEIPQRLHALLMPPEPIIINHVISVDPNDQKKTACYDIDVEVDDTLKTQMNSFLLSTASQQEIAALDNKIHETIETINQLKTQREFMLSFARDPQGFINDWLQSQCRDLKTMTDVVGNPEEERRAEFYFQPWAQEAVCRYFYSKVQQRRQELEQALGIRNT
SIO_010081: SMARCD1
subclass of: SO_0000673
so part of: SMARCD1
location: join(730375..730540,730615..730802,731566..731608,731693..731815,732061..732183,732666..732782,733103..733204,733501..733662,733779..733876,734324..734459,734785..734907,735147..735248,735434..735487)
location: region:730375-735487:1
so has part: feature:730375-730540:1:exon
so has part: feature:730615-730802:1:exon
so has part: feature:731566-731608:1:exon
so has part: feature:731693-731815:1:exon
so has part: feature:732061-732183:1:exon
so has part: feature:732666-732782:1:exon
so has part: feature:733103-733204:1:exon
so has part: feature:733501-733662:1:exon
so has part: feature:733779-733876:1:exon
so has part: feature:734324-734459:1:exon
so has part: feature:734785-734907:1:exon
so has part: feature:735147-735248:1:exon
so has part: feature:735434-735487:1:exon

XP_030823052.1
type: Protein
SIO_000068: ncbiprotein

position:735487:1
position: 735487
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:730375-730540:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:730615-730802:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:731566-731608:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:731693-731815:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:732061-732183:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:732666-732782:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:733103-733204:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:733501-733662:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:733779-733876:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:734324-734459:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:734785-734907:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:735147-735248:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:735434-735487:1:exon

GPD1
type: Gene
subclass of: SO_0000704
RO_0002162: 87175
gene: GPD1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 738252..741941
location: region:738252-741941:1
so has part: feature:738252-741941:1:exon
subclass of: SO_0000010

115914595
type: Gene
SIO_000068: ncbigene

position:738252:1
position: 738252
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:741941:1
position: 741941
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:738252-741941:1:exon

GPD1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 87175
gene: GPD1
product: glycerol-3-phosphate dehydrogenase 1, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 32 Proteins, and 48% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_030967202.1
SIO_010081: GPD1
subclass of: SO_0000673
so part of: GPD1
location: join(738252..738311,738469..738646,739040..739180,739601..739739,740616..740728,740873..741106,741532..741638,741845..741941)
location: region:738252-741941:1
so has part: feature:738252-738311:1:exon
so has part: feature:738469-738646:1:exon
so has part: feature:739040-739180:1:exon
so has part: feature:739601-739739:1:exon
so has part: feature:740616-740728:1:exon
so has part: feature:740873-741106:1:exon
so has part: feature:741532-741638:1:exon
so has part: feature:741845-741941:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:738252-738311:1:exon

position:738311:1
position: 738311
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:738469-738646:1:exon

position:738469:1
position: 738469
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:738646:1
position: 738646
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:739040-739180:1:exon

position:739040:1
position: 739040
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:739180:1
position: 739180
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:739601-739739:1:exon

position:739601:1
position: 739601
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:739739:1
position: 739739
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:740616-740728:1:exon

position:740616:1
position: 740616
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:740728:1
position: 740728
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:740873-741106:1:exon

position:740873:1
position: 740873
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:741106:1
position: 741106
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:741532-741638:1:exon

position:741532:1
position: 741532
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:741638:1
position: 741638
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:741845-741941:1:exon

position:741845:1
position: 741845
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

GPD1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 87175
gene: GPD1
product: glycerol-3-phosphate dehydrogenase 1, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 38% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_030967203.1
SIO_010081: GPD1
subclass of: SO_0000673
so part of: GPD1
location: join(738252..738311,738469..738646,739109..739180,739601..739739,740616..740728,740873..741106,741532..741638,741845..741941)
location: region:738252-741941:1
so has part: feature:738252-738311:1:exon
so has part: feature:738469-738646:1:exon
so has part: feature:739109-739180:1:exon
so has part: feature:739601-739739:1:exon
so has part: feature:740616-740728:1:exon
so has part: feature:740873-741106:1:exon
so has part: feature:741532-741638:1:exon
so has part: feature:741845-741941:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:738252-738311:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:738469-738646:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:739109-739180:1:exon

position:739109:1
position: 739109
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:739601-739739:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:740616-740728:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:740873-741106:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:741532-741638:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:741845-741941:1:exon

GPD1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 87175
gene: GPD1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: glycerol-3-phosphate dehydrogenase [NAD(+)], cytoplasmic isoform X1
translation: MGGKKVCVVGSGNWGSAIAKIAGSNTARLGSFENQVNMWVLEEEVGGRRLTDIINTEHENVKYLPGHKLPPNVVAEPDLLKACAGADVLLFVVPHQFIGKVCDQLKGHVKKDAIGMSLIKGVDEGPDGLRLISDIIHEKLGIEMNVLMGANIANEVAEEKFCETTIGCKNMKHGQMLKDLMQTPNFRVSVVQEADTVEICGALKNVVAVGAGFCDGLGYGDNTKAAVIRLGLMEMIGFAKLFCKAPVTSSTFLESCGVADLITTCYGGRNRKVAEAFAKTGKSIEQLEKEMLNGQKLQGPQTSAELHRILKSKNAVEKFPLFTAVYRICYEGKPVTDFITCLQNHPEHM
SIO_010081: GPD1
subclass of: SO_0000673
so part of: GPD1
location: join(738271..738311,738469..738646,739040..739180,739601..739739,740616..740728,740873..741106,741532..741638,741845..741941)
location: region:738271-741941:1
so has part: feature:738271-738311:1:exon
so has part: feature:738469-738646:1:exon
so has part: feature:739040-739180:1:exon
so has part: feature:739601-739739:1:exon
so has part: feature:740616-740728:1:exon
so has part: feature:740873-741106:1:exon
so has part: feature:741532-741638:1:exon
so has part: feature:741845-741941:1:exon

XP_030823062.1
type: Protein
SIO_000068: ncbiprotein

position:738271:1
position: 738271
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:738271-738311:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:738469-738646:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:739040-739180:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:739601-739739:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:740616-740728:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:740873-741106:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:741532-741638:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:741845-741941:1:exon

GPD1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 87175
gene: GPD1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: glycerol-3-phosphate dehydrogenase [NAD(+)], cytoplasmic isoform X2
translation: MGGKKVCVVGSGNWGSAIAKIAGSNTARLGSFENQVNMWVLEEEVGGRRLTDIINTEHENVKYLPGHKLPPNVFIGKVCDQLKGHVKKDAIGMSLIKGVDEGPDGLRLISDIIHEKLGIEMNVLMGANIANEVAEEKFCETTIGCKNMKHGQMLKDLMQTPNFRVSVVQEADTVEICGALKNVVAVGAGFCDGLGYGDNTKAAVIRLGLMEMIGFAKLFCKAPVTSSTFLESCGVADLITTCYGGRNRKVAEAFAKTGKSIEQLEKEMLNGQKLQGPQTSAELHRILKSKNAVEKFPLFTAVYRICYEGKPVTDFITCLQNHPEHM
SIO_010081: GPD1
subclass of: SO_0000673
so part of: GPD1
location: join(738271..738311,738469..738646,739109..739180,739601..739739,740616..740728,740873..741106,741532..741638,741845..741941)
location: region:738271-741941:1
so has part: feature:738271-738311:1:exon
so has part: feature:738469-738646:1:exon
so has part: feature:739109-739180:1:exon
so has part: feature:739601-739739:1:exon
so has part: feature:740616-740728:1:exon
so has part: feature:740873-741106:1:exon
so has part: feature:741532-741638:1:exon
so has part: feature:741845-741941:1:exon

XP_030823063.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:738271-738311:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:738469-738646:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:739109-739180:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:739601-739739:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:740616-740728:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:740873-741106:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:741532-741638:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:741845-741941:1:exon

LOC115914605
type: Gene
subclass of: SO_0000704
RO_0002162: 87175
gene: LOC115914605
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 744682..746156
location: region:744682-746156:1
so has part: feature:744682-746156:1:exon
subclass of: SO_0000010

115914605
type: Gene
SIO_000068: ncbigene

position:744682:1
position: 744682
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:746156:1
position: 746156
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:744682-746156:1:exon

LOC115914605
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 87175
gene: LOC115914605
product: cytochrome c oxidase assembly protein COX14 homolog
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
transcript id: XM_030967214.1
SIO_010081: LOC115914605
subclass of: SO_0000673
so part of: LOC115914605
location: join(744682..744751,745870..746156)
location: region:744682-746156:1
so has part: feature:744682-744751:1:exon
so has part: feature:745870-746156:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:744682-744751:1:exon

position:744751:1
position: 744751
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:745870-746156:1:exon

position:745870:1
position: 745870
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC115914605
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 87175
gene: LOC115914605
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: cytochrome c oxidase assembly protein COX14 homolog
translation: MVSRKQLADFGYKAFPGSMMLLTVYAGYLCSVRVQRMLQHRRQRENTPGPES
SIO_010081: LOC115914605
subclass of: SO_0000673
so part of: LOC115914605
location: 745878..746036
location: region:745878-746036:1
so has part: feature:745878-746036:1:exon

XP_030823074.1
type: Protein
SIO_000068: ncbiprotein

position:745878:1
position: 745878
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:746036:1
position: 746036
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:745878-746036:1:exon

CERS5
type: Gene
subclass of: SO_0000704
RO_0002162: 87175
gene: CERS5
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(746393..763666)
location: region:746393-763666:-1
so has part: feature:746393-763666:-1:exon
subclass of: SO_0000010

115914592
type: Gene
SIO_000068: ncbigene

position:746393:-1
position: 746393
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:763666:-1
position: 763666
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:746393-763666:-1:exon

CERS5
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 87175
gene: CERS5
product: ceramide synthase 5
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 ESTs, 14 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XM_030967195.1
SIO_010081: CERS5
subclass of: SO_0000673
so part of: CERS5
location: complement(join(746393..747616,750150..750306,752524..752630,753214..753342,754596..754688,754977..755027,755551..755608,756591..756721,758638..758743,763407..763666))
location: region:746393-763666:-1
so has part: feature:763407-763666:-1:exon
so has part: feature:758638-758743:-1:exon
so has part: feature:756591-756721:-1:exon
so has part: feature:755551-755608:-1:exon
so has part: feature:754977-755027:-1:exon
so has part: feature:754596-754688:-1:exon
so has part: feature:753214-753342:-1:exon
so has part: feature:752524-752630:-1:exon
so has part: feature:750150-750306:-1:exon
so has part: feature:746393-747616:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:763407-763666:-1:exon

position:763407:-1
position: 763407
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:758638-758743:-1:exon

position:758638:-1
position: 758638
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:758743:-1
position: 758743
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:756591-756721:-1:exon

position:756591:-1
position: 756591
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:756721:-1
position: 756721
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:755551-755608:-1:exon

position:755551:-1
position: 755551
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:755608:-1
position: 755608
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:754977-755027:-1:exon

position:754977:-1
position: 754977
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:755027:-1
position: 755027
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:754596-754688:-1:exon

position:754596:-1
position: 754596
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:754688:-1
position: 754688
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:753214-753342:-1:exon

position:753214:-1
position: 753214
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:753342:-1
position: 753342
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:752524-752630:-1:exon

position:752524:-1
position: 752524
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:752630:-1
position: 752630
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:750150-750306:-1:exon

position:750150:-1
position: 750150
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:750306:-1
position: 750306
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:746393-747616:-1:exon

position:747616:-1
position: 747616
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

CERS5
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 87175
gene: CERS5
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: ceramide synthase 5
translation: MAAAAAAALRAWFWNERFWLPHNVTWADLAGEPGPPGSGLQYPRAAHVFSAFPLALGIFAVRLLFERFIAKPCAINLGIQDSGPHRAQPNAILEKVFTSITKSPDGKRLEGLSKQLDWDVRKIQRWFRHRRNQDKPTTLTKFCESMWRFTFYFSIFFYGIRFLWTAPWFWDTRQCWYNYPFQPLTSRLYYYYILELAFYWSLMFSQFTDIKRKDFLIMFVHHLATIGLITFSYMNNMVRVGTLVLCLHDASDFLLEAAKLANYAKYQRLCDAFFMLFGVVFIVTRLGIYPFWILNTTLFESWELIGPYPSWWLFNGLLVTLQVLHVIWSYLIIRTASKALVRGKVSKDDRSDVESSSEEEDVTSNSTKGIFSTSSNGSNRLNGHVAGGQWTGEE
SIO_010081: CERS5
subclass of: SO_0000673
so part of: CERS5
location: complement(join(747464..747616,750150..750306,752524..752630,753214..753342,754596..754688,754977..755027,755551..755608,756591..756721,758638..758743,763407..763606))
location: region:747464-763606:-1
so has part: feature:763407-763606:-1:exon
so has part: feature:758638-758743:-1:exon
so has part: feature:756591-756721:-1:exon
so has part: feature:755551-755608:-1:exon
so has part: feature:754977-755027:-1:exon
so has part: feature:754596-754688:-1:exon
so has part: feature:753214-753342:-1:exon
so has part: feature:752524-752630:-1:exon
so has part: feature:750150-750306:-1:exon
so has part: feature:747464-747616:-1:exon

XP_030823055.1
type: Protein
SIO_000068: ncbiprotein

position:747464:-1
position: 747464
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:763606:-1
position: 763606
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:763407-763606:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:758638-758743:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:756591-756721:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:755551-755608:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:754977-755027:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:754596-754688:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:753214-753342:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:752524-752630:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:750150-750306:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:747464-747616:-1:exon

LIMA1
type: Gene
subclass of: SO_0000704
RO_0002162: 87175
gene: LIMA1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(766201..789518)
location: region:766201-789518:-1
so has part: feature:766201-789518:-1:exon
subclass of: SO_0000010

115914584
type: Gene
SIO_000068: ncbigene

position:766201:-1
position: 766201
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:789518:-1
position: 789518
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:766201-789518:-1:exon

LIMA1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 87175
gene: LIMA1
product: LIM domain and actin binding 1, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 ESTs, 13 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_030967178.1
SIO_010081: LIMA1
subclass of: SO_0000673
so part of: LIMA1
location: complement(join(766201..768376,768759..768892,771771..771883,772150..772207,774161..774265,776550..776710,777473..777584,781827..782225,784132..784177,786102..786237,789425..789518))
location: region:766201-789518:-1
so has part: feature:789425-789518:-1:exon
so has part: feature:786102-786237:-1:exon
so has part: feature:784132-784177:-1:exon
so has part: feature:781827-782225:-1:exon
so has part: feature:777473-777584:-1:exon
so has part: feature:776550-776710:-1:exon
so has part: feature:774161-774265:-1:exon
so has part: feature:772150-772207:-1:exon
so has part: feature:771771-771883:-1:exon
so has part: feature:768759-768892:-1:exon
so has part: feature:766201-768376:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:789425-789518:-1:exon

position:789425:-1
position: 789425
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:786102-786237:-1:exon

position:786102:-1
position: 786102
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:786237:-1
position: 786237
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:784132-784177:-1:exon

position:784132:-1
position: 784132
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:784177:-1
position: 784177
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:781827-782225:-1:exon

position:781827:-1
position: 781827
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:782225:-1
position: 782225
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:777473-777584:-1:exon

position:777473:-1
position: 777473
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:777584:-1
position: 777584
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:776550-776710:-1:exon

position:776550:-1
position: 776550
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:776710:-1
position: 776710
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:774161-774265:-1:exon

position:774161:-1
position: 774161
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:774265:-1
position: 774265
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:772150-772207:-1:exon

position:772150:-1
position: 772150
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:772207:-1
position: 772207
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:771771-771883:-1:exon

position:771771:-1
position: 771771
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:771883:-1
position: 771883
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:768759-768892:-1:exon

position:768759:-1
position: 768759
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:768892:-1
position: 768892
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:766201-768376:-1:exon

position:768376:-1
position: 768376
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LIMA1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 87175
gene: LIMA1
product: LIM domain and actin binding 1, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 ESTs, 12 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XM_030967179.1
SIO_010081: LIMA1
subclass of: SO_0000673
so part of: LIMA1
location: complement(join(766201..768376,768759..768892,771771..771883,772150..772207,774161..774265,776550..776710,777473..777581,781827..782225,784132..784177,786102..786237,789391..789516))
location: region:766201-789516:-1
so has part: feature:789391-789516:-1:exon
so has part: feature:786102-786237:-1:exon
so has part: feature:784132-784177:-1:exon
so has part: feature:781827-782225:-1:exon
so has part: feature:777473-777581:-1:exon
so has part: feature:776550-776710:-1:exon
so has part: feature:774161-774265:-1:exon
so has part: feature:772150-772207:-1:exon
so has part: feature:771771-771883:-1:exon
so has part: feature:768759-768892:-1:exon
so has part: feature:766201-768376:-1:exon

position:789516:-1
position: 789516
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:789391-789516:-1:exon

position:789391:-1
position: 789391
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:786102-786237:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:784132-784177:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:781827-782225:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:777473-777581:-1:exon

position:777581:-1
position: 777581
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:776550-776710:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:774161-774265:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:772150-772207:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:771771-771883:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:768759-768892:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:766201-768376:-1:exon

LIMA1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 87175
gene: LIMA1
product: LIM domain and actin binding 1, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 ESTs, 12 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XM_030967180.1
SIO_010081: LIMA1
subclass of: SO_0000673
so part of: LIMA1
location: complement(join(766201..768376,768759..768892,771771..771883,772150..772207,776550..776710,777473..777584,781827..782225,784132..784177,786102..786237,789391..789516))
location: region:766201-789516:-1
so has part: feature:789391-789516:-1:exon
so has part: feature:786102-786237:-1:exon
so has part: feature:784132-784177:-1:exon
so has part: feature:781827-782225:-1:exon
so has part: feature:777473-777584:-1:exon
so has part: feature:776550-776710:-1:exon
so has part: feature:772150-772207:-1:exon
so has part: feature:771771-771883:-1:exon
so has part: feature:768759-768892:-1:exon
so has part: feature:766201-768376:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:789391-789516:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:786102-786237:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:784132-784177:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:781827-782225:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:777473-777584:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:776550-776710:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:772150-772207:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:771771-771883:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:768759-768892:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:766201-768376:-1:exon

LIMA1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 87175
gene: LIMA1
product: LIM domain and actin binding 1, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 ESTs, 13 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XM_030967177.1
SIO_010081: LIMA1
subclass of: SO_0000673
so part of: LIMA1
location: complement(join(766201..768376,768759..768892,771771..771883,772150..772207,774161..774265,776550..776710,777473..777584,781827..782225,784132..784177,786102..786237,789391..789516))
location: region:766201-789516:-1
so has part: feature:789391-789516:-1:exon
so has part: feature:786102-786237:-1:exon
so has part: feature:784132-784177:-1:exon
so has part: feature:781827-782225:-1:exon
so has part: feature:777473-777584:-1:exon
so has part: feature:776550-776710:-1:exon
so has part: feature:774161-774265:-1:exon
so has part: feature:772150-772207:-1:exon
so has part: feature:771771-771883:-1:exon
so has part: feature:768759-768892:-1:exon
so has part: feature:766201-768376:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:789391-789516:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:786102-786237:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:784132-784177:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:781827-782225:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:777473-777584:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:776550-776710:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:774161-774265:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:772150-772207:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:771771-771883:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:768759-768892:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:766201-768376:-1:exon

LIMA1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 87175
gene: LIMA1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: LIM domain and actin-binding protein 1 isoform X2
translation: MEPSPFNRRQWTSQSLKITAKELSLVNKNKSSALVERFSKYQKAAEEATAEKKRSNTENLPAHLTRGNLSVLKKKWENPVPGAESGKEAVRGSGAEVRHKVGTGRAPSPSPGAGAAPGRPQCPAGDSAEPRSRSREGATMENCAREPREMEKPEGSERSESPGRIEKYNVPLSKLKMMFEKGEAPQPKGPRELRRAGAGRRISENSLSLEDCDAAQGERSHSTAGYLVETSSGLSPDKAETRKNLDMPRLSETSIKDRLAKYQAAVSKQGSSSGIIPMSEIQSSESELKNYKSGQKENMAPIEDSSSCQDGEKVSVGENSLSLHSGLLEDGHAGQSESEAEAQKPVSSKQQNLGAKAAGQTEASPPKAVKKFQLPMKETCVGCQKTVYPMERLFANQQVFHISCFRCSYCNSKLSLGTYASLRGNIYCKPHFNQLFKSKGNYDEGFGHKQHKELWAGKTECEESPEKTVHGVNSPDTPQSPGVEDAPIAKVGVLAASMEAKASAVPEREERPAETKKLRIAWPPPSDQSIQGSALDEGIKVLKPKWPPEEEIFKPDVQEDVDLDLKKLRRSSSLKERSRPFTVAASFRTVSVKGHKTENSPSPSKEERDTLKRSDELEREVVVEKKQKEKTVEHRNIQNSGEKNEEEEWELSGIRTTEQNIVENGQMNADTDEEEHATEEPEIPKEELLEPNSAKHSSLANVVTAKESSPNQNRKSQDVGFWEGEDMEDLSVEEQIKRNRYYEDDDDDE
SIO_010081: LIMA1
subclass of: SO_0000673
so part of: LIMA1
location: complement(join(767371..768376,768759..768892,771771..771883,772150..772207,774161..774265,776550..776710,777473..777581,781827..782225,784132..784177,786102..786220))
location: region:767371-786220:-1
so has part: feature:786102-786220:-1:exon
so has part: feature:784132-784177:-1:exon
so has part: feature:781827-782225:-1:exon
so has part: feature:777473-777581:-1:exon
so has part: feature:776550-776710:-1:exon
so has part: feature:774161-774265:-1:exon
so has part: feature:772150-772207:-1:exon
so has part: feature:771771-771883:-1:exon
so has part: feature:768759-768892:-1:exon
so has part: feature:767371-768376:-1:exon

XP_030823039.1
type: Protein
SIO_000068: ncbiprotein

position:767371:-1
position: 767371
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:786220:-1
position: 786220
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:786102-786220:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:784132-784177:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:781827-782225:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:777473-777581:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:776550-776710:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:774161-774265:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:772150-772207:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:771771-771883:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:768759-768892:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:767371-768376:-1:exon

LIMA1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 87175
gene: LIMA1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: LIM domain and actin-binding protein 1 isoform X3
translation: MEPSPFNRRQWTSQSLKITAKELSLVNKNKSSALVERFSKYQKAAEEATAEKKRSNTENLPAHLTRGNLSVLKKKWENPVPGAESGKEAVRGSGAEVRHKVGTGRAPSPSPGAGAAPGRPQCPAGDSAEPRSRSREGATMENCAREPREMEKPEGSERSESPGRIEKYNVPLSKLKMMFEKGEAPQPKQGPRELRRAGAGRRISENSLSLEDCDAAQGERSHSTAGYLVETSSGLSPDKAETRKNLDMPRLSETSIKDRLAKYQAAVSKQGSSSGIIPMVSVGENSLSLHSGLLEDGHAGQSESEAEAQKPVSSKQQNLGAKAAGQTEASPPKAVKKFQLPMKETCVGCQKTVYPMERLFANQQVFHISCFRCSYCNSKLSLGTYASLRGNIYCKPHFNQLFKSKGNYDEGFGHKQHKELWAGKTECEESPEKTVHGVNSPDTPQSPGVEDAPIAKVGVLAASMEAKASAVPEREERPAETKKLRIAWPPPSDQSIQGSALDEGIKVLKPKWPPEEEIFKPDVQEDVDLDLKKLRRSSSLKERSRPFTVAASFRTVSVKGHKTENSPSPSKEERDTLKRSDELEREVVVEKKQKEKTVEHRNIQNSGEKNEEEEWELSGIRTTEQNIVENGQMNADTDEEEHATEEPEIPKEELLEPNSAKHSSLANVVTAKESSPNQNRKSQDVGFWEGEDMEDLSVEEQIKRNRYYEDDDDDE
SIO_010081: LIMA1
subclass of: SO_0000673
so part of: LIMA1
location: complement(join(767371..768376,768759..768892,771771..771883,772150..772207,776550..776710,777473..777584,781827..782225,784132..784177,786102..786220))
location: region:767371-786220:-1
so has part: feature:786102-786220:-1:exon
so has part: feature:784132-784177:-1:exon
so has part: feature:781827-782225:-1:exon
so has part: feature:777473-777584:-1:exon
so has part: feature:776550-776710:-1:exon
so has part: feature:772150-772207:-1:exon
so has part: feature:771771-771883:-1:exon
so has part: feature:768759-768892:-1:exon
so has part: feature:767371-768376:-1:exon

XP_030823040.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:786102-786220:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:784132-784177:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:781827-782225:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:777473-777584:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:776550-776710:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:772150-772207:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:771771-771883:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:768759-768892:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:767371-768376:-1:exon

LIMA1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 87175
gene: LIMA1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: LIM domain and actin-binding protein 1 isoform X1
translation: MEPSPFNRRQWTSQSLKITAKELSLVNKNKSSALVERFSKYQKAAEEATAEKKRSNTENLPAHLTRGNLSVLKKKWENPVPGAESGKEAVRGSGAEVRHKVGTGRAPSPSPGAGAAPGRPQCPAGDSAEPRSRSREGATMENCAREPREMEKPEGSERSESPGRIEKYNVPLSKLKMMFEKGEAPQPKQGPRELRRAGAGRRISENSLSLEDCDAAQGERSHSTAGYLVETSSGLSPDKAETRKNLDMPRLSETSIKDRLAKYQAAVSKQGSSSGIIPMSEIQSSESELKNYKSGQKENMAPIEDSSSCQDGEKVSVGENSLSLHSGLLEDGHAGQSESEAEAQKPVSSKQQNLGAKAAGQTEASPPKAVKKFQLPMKETCVGCQKTVYPMERLFANQQVFHISCFRCSYCNSKLSLGTYASLRGNIYCKPHFNQLFKSKGNYDEGFGHKQHKELWAGKTECEESPEKTVHGVNSPDTPQSPGVEDAPIAKVGVLAASMEAKASAVPEREERPAETKKLRIAWPPPSDQSIQGSALDEGIKVLKPKWPPEEEIFKPDVQEDVDLDLKKLRRSSSLKERSRPFTVAASFRTVSVKGHKTENSPSPSKEERDTLKRSDELEREVVVEKKQKEKTVEHRNIQNSGEKNEEEEWELSGIRTTEQNIVENGQMNADTDEEEHATEEPEIPKEELLEPNSAKHSSLANVVTAKESSPNQNRKSQDVGFWEGEDMEDLSVEEQIKRNRYYEDDDDDE
SIO_010081: LIMA1
subclass of: SO_0000673
so part of: LIMA1
location: complement(join(767371..768376,768759..768892,771771..771883,772150..772207,774161..774265,776550..776710,777473..777584,781827..782225,784132..784177,786102..786220))
location: region:767371-786220:-1
so has part: feature:786102-786220:-1:exon
so has part: feature:784132-784177:-1:exon
so has part: feature:781827-782225:-1:exon
so has part: feature:777473-777584:-1:exon
so has part: feature:776550-776710:-1:exon
so has part: feature:774161-774265:-1:exon
so has part: feature:772150-772207:-1:exon
so has part: feature:771771-771883:-1:exon
so has part: feature:768759-768892:-1:exon
so has part: feature:767371-768376:-1:exon

XP_030823037.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:786102-786220:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:784132-784177:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:781827-782225:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:777473-777584:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:776550-776710:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:774161-774265:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:772150-772207:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:771771-771883:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:768759-768892:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:767371-768376:-1:exon

LIMA1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 87175
gene: LIMA1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: LIM domain and actin-binding protein 1 isoform X1
translation: MEPSPFNRRQWTSQSLKITAKELSLVNKNKSSALVERFSKYQKAAEEATAEKKRSNTENLPAHLTRGNLSVLKKKWENPVPGAESGKEAVRGSGAEVRHKVGTGRAPSPSPGAGAAPGRPQCPAGDSAEPRSRSREGATMENCAREPREMEKPEGSERSESPGRIEKYNVPLSKLKMMFEKGEAPQPKQGPRELRRAGAGRRISENSLSLEDCDAAQGERSHSTAGYLVETSSGLSPDKAETRKNLDMPRLSETSIKDRLAKYQAAVSKQGSSSGIIPMSEIQSSESELKNYKSGQKENMAPIEDSSSCQDGEKVSVGENSLSLHSGLLEDGHAGQSESEAEAQKPVSSKQQNLGAKAAGQTEASPPKAVKKFQLPMKETCVGCQKTVYPMERLFANQQVFHISCFRCSYCNSKLSLGTYASLRGNIYCKPHFNQLFKSKGNYDEGFGHKQHKELWAGKTECEESPEKTVHGVNSPDTPQSPGVEDAPIAKVGVLAASMEAKASAVPEREERPAETKKLRIAWPPPSDQSIQGSALDEGIKVLKPKWPPEEEIFKPDVQEDVDLDLKKLRRSSSLKERSRPFTVAASFRTVSVKGHKTENSPSPSKEERDTLKRSDELEREVVVEKKQKEKTVEHRNIQNSGEKNEEEEWELSGIRTTEQNIVENGQMNADTDEEEHATEEPEIPKEELLEPNSAKHSSLANVVTAKESSPNQNRKSQDVGFWEGEDMEDLSVEEQIKRNRYYEDDDDDE
SIO_010081: LIMA1
subclass of: SO_0000673
so part of: LIMA1
location: complement(join(767371..768376,768759..768892,771771..771883,772150..772207,774161..774265,776550..776710,777473..777584,781827..782225,784132..784177,786102..786220))
location: region:767371-786220:-1
so has part: feature:786102-786220:-1:exon
so has part: feature:784132-784177:-1:exon
so has part: feature:781827-782225:-1:exon
so has part: feature:777473-777584:-1:exon
so has part: feature:776550-776710:-1:exon
so has part: feature:774161-774265:-1:exon
so has part: feature:772150-772207:-1:exon
so has part: feature:771771-771883:-1:exon
so has part: feature:768759-768892:-1:exon
so has part: feature:767371-768376:-1:exon

XP_030823038.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:786102-786220:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:784132-784177:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:781827-782225:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:777473-777584:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:776550-776710:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:774161-774265:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:772150-772207:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:771771-771883:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:768759-768892:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:767371-768376:-1:exon

LARP4
type: Gene
subclass of: SO_0000704
RO_0002162: 87175
gene: LARP4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 798181..819818
location: region:798181-819818:1
so has part: feature:798181-819818:1:exon
subclass of: SO_0000010

115914583
type: Gene
SIO_000068: ncbigene

position:798181:1
position: 798181
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:819818:1
position: 819818
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:798181-819818:1:exon

LARP4
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 87175
gene: LARP4
product: La ribonucleoprotein 4
exception: unclassified transcription discrepancy
note: The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: inserted 1 base in 1 codon; deleted 2 bases in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 14 ESTs, 7 Proteins, and 97% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
transcript id: XM_030967176.1
SIO_010081: LARP4
subclass of: SO_0000673
so part of: LARP4
location: join(798181..798282,803280..803424,804508..804666,804993..805068,805550..805686,805916..806019,807007..807117,807500..807553,808152..808361,808811..808914,811575..811799,812490..812538,812731..812889,813420..813541,814346..814514,814732..819818)
location: region:798181-819818:1
so has part: feature:798181-798282:1:exon
so has part: feature:803280-803424:1:exon
so has part: feature:804508-804666:1:exon
so has part: feature:804993-805068:1:exon
so has part: feature:805550-805686:1:exon
so has part: feature:805916-806019:1:exon
so has part: feature:807007-807117:1:exon
so has part: feature:807500-807553:1:exon
so has part: feature:808152-808361:1:exon
so has part: feature:808811-808914:1:exon
so has part: feature:811575-811799:1:exon
so has part: feature:812490-812538:1:exon
so has part: feature:812731-812889:1:exon
so has part: feature:813420-813541:1:exon
so has part: feature:814346-814514:1:exon
so has part: feature:814732-819818:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:798181-798282:1:exon

position:798282:1
position: 798282
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:803280-803424:1:exon

position:803280:1
position: 803280
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:803424:1
position: 803424
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:804508-804666:1:exon

position:804508:1
position: 804508
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:804666:1
position: 804666
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:804993-805068:1:exon

position:804993:1
position: 804993
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:805068:1
position: 805068
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:805550-805686:1:exon

position:805550:1
position: 805550
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:805686:1
position: 805686
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:805916-806019:1:exon

position:805916:1
position: 805916
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:806019:1
position: 806019
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:807007-807117:1:exon

position:807007:1
position: 807007
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:807117:1
position: 807117
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:807500-807553:1:exon

position:807500:1
position: 807500
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:807553:1
position: 807553
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:808152-808361:1:exon

position:808152:1
position: 808152
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:808361:1
position: 808361
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:808811-808914:1:exon

position:808811:1
position: 808811
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:808914:1
position: 808914
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:811575-811799:1:exon

position:811575:1
position: 811575
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:811799:1
position: 811799
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:812490-812538:1:exon

position:812490:1
position: 812490
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:812538:1
position: 812538
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:812731-812889:1:exon

position:812731:1
position: 812731
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:812889:1
position: 812889
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:813420-813541:1:exon

position:813420:1
position: 813420
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:813541:1
position: 813541
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:814346-814514:1:exon

position:814346:1
position: 814346
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:814514:1
position: 814514
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:814732-819818:1:exon

position:814732:1
position: 814732
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LARP4
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 87175
gene: LARP4
exception: unclassified translation discrepancy
note: The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: inserted 1 base in 1 codon; deleted 2 bases in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: LOW QUALITY PROTEIN: la-related protein 4
translation: MLLFVEVTSKGAGLNPNAKVWQEVPQGSGEAVPPTNGTEHTWQETAAAQGTPAEGNIEISEDSCKQYEVMYSPSCEATRNGTGVDEASANGIVLATEDLGYQIYEVSGDGSSTVSTEDIRECLRKQLEFCFSRENLSKDLYLMSQMDSDQFVPIWTIANMEGIKKLTTDMDLILEVLRSSPMVQVDERGEKVRPNHKRCIIILREIPETTPIEEVKALFKNENCPKVISCEFAHNNNWYVTFQSDTDAQQAFKYLREEVKTFQGKPVMARIKAINTFFAKNGYRVVDSNVYPQPVQTQAQFASPLFMQPVYSPQQYSIYSIVPQTWSPNPAPYFETPLAPFPNGGFVNGFNTPGSYKTNAASLSIGRPFHRNRVKPHFRSSSSSEHPEGPPGAGALPMGDLSRTSSRNFVMERHNSSLTGHQDQGYSQKDSPTAQLEQNGDYGVGRGRRNVFRGRRRREDDRVSRPQPSAETKTQTPKFDLLASNFPPLPGSTAKILGEPVLESRMSDIVKGVCKEKESKDSLCPCPAPAPEEQTPSTAQLPVPSVSSPSQTEPVVLSMVQPESKPEEVSAPKDVASPASPPASVCPISAAKPPRTNTSSPSAQASTAPALSTQEPRKLSYAEVCQKPPKEPPPVPVQPLREHRTNIVAPAKNEENGTSEKAPERAPHERPEGRMKDYCGFRGSGAPRGAAGXNQGTEAPVWTQIFASGSATPRGQGAVRATPVTKVTLGQPMSLFHLSCGLKSSRETEEGRIQEGE
SIO_010081: LARP4
subclass of: SO_0000673
so part of: LARP4
location: join(798265..798282,803280..803424,804508..804666,804993..805068,805550..805686,805916..806019,807007..807117,807500..807553,808152..808361,808811..808914,811575..811799,812490..812538,812731..812889,813420..813541,814346..814514,814732..815164)
location: region:798265-815164:1
so has part: feature:798265-798282:1:exon
so has part: feature:803280-803424:1:exon
so has part: feature:804508-804666:1:exon
so has part: feature:804993-805068:1:exon
so has part: feature:805550-805686:1:exon
so has part: feature:805916-806019:1:exon
so has part: feature:807007-807117:1:exon
so has part: feature:807500-807553:1:exon
so has part: feature:808152-808361:1:exon
so has part: feature:808811-808914:1:exon
so has part: feature:811575-811799:1:exon
so has part: feature:812490-812538:1:exon
so has part: feature:812731-812889:1:exon
so has part: feature:813420-813541:1:exon
so has part: feature:814346-814514:1:exon
so has part: feature:814732-815164:1:exon

XP_030823036.1
type: Protein
SIO_000068: ncbiprotein

position:798265:1
position: 798265
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:815164:1
position: 815164
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:798265-798282:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:803280-803424:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:804508-804666:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:804993-805068:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:805550-805686:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:805916-806019:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:807007-807117:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:807500-807553:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:808152-808361:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:808811-808914:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:811575-811799:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:812490-812538:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:812731-812889:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:813420-813541:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:814346-814514:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:814732-815164:1:exon

DIP2B
type: Gene
subclass of: SO_0000704
RO_0002162: 87175
gene: DIP2B
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 820510..880298
location: region:820510-880298:1
so has part: feature:820510-880298:1:exon
subclass of: SO_0000010

115914580
type: Gene
SIO_000068: ncbigene

position:820510:1
position: 820510
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:880298:1
position: 880298
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:820510-880298:1:exon

DIP2B
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 87175
gene: DIP2B
product: disco interacting protein 2 homolog B, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 5 ESTs, 1 Protein, and 99% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_030967167.1
SIO_010081: DIP2B
subclass of: SO_0000673
so part of: DIP2B
location: join(820510..820661,845944..846015,849937..850080,850334..850459,852784..852996,855235..855378,856060..856179,856778..856975,857199..857290,857600..857692,858904..859027,859524..859633,860629..860731,861717..861781,862268..862361,863074..863193,863763..863877,864435..864574,864779..864915,865236..865316,865445..865572,866281..866395,867374..867575,867913..868022,868141..868221,868771..868894,869231..869352,869972..870083,870523..870632,871380..871510,872028..872196,873127..873297,873768..873829,873964..874021,874536..874610,875150..875327,876232..876355,876806..877058)
location: region:820510-877058:1
so has part: feature:820510-820661:1:exon
so has part: feature:845944-846015:1:exon
so has part: feature:849937-850080:1:exon
so has part: feature:850334-850459:1:exon
so has part: feature:852784-852996:1:exon
so has part: feature:855235-855378:1:exon
so has part: feature:856060-856179:1:exon
so has part: feature:856778-856975:1:exon
so has part: feature:857199-857290:1:exon
so has part: feature:857600-857692:1:exon
so has part: feature:858904-859027:1:exon
so has part: feature:859524-859633:1:exon
so has part: feature:860629-860731:1:exon
so has part: feature:861717-861781:1:exon
so has part: feature:862268-862361:1:exon
so has part: feature:863074-863193:1:exon
so has part: feature:863763-863877:1:exon
so has part: feature:864435-864574:1:exon
so has part: feature:864779-864915:1:exon
so has part: feature:865236-865316:1:exon
so has part: feature:865445-865572:1:exon
so has part: feature:866281-866395:1:exon
so has part: feature:867374-867575:1:exon
so has part: feature:867913-868022:1:exon
so has part: feature:868141-868221:1:exon
so has part: feature:868771-868894:1:exon
so has part: feature:869231-869352:1:exon
so has part: feature:869972-870083:1:exon
so has part: feature:870523-870632:1:exon
so has part: feature:871380-871510:1:exon
so has part: feature:872028-872196:1:exon
so has part: feature:873127-873297:1:exon
so has part: feature:873768-873829:1:exon
so has part: feature:873964-874021:1:exon
so has part: feature:874536-874610:1:exon
so has part: feature:875150-875327:1:exon
so has part: feature:876232-876355:1:exon
so has part: feature:876806-877058:1:exon

position:877058:1
position: 877058
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:820510-820661:1:exon

position:820661:1
position: 820661
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:845944-846015:1:exon

position:845944:1
position: 845944
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:846015:1
position: 846015
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:849937-850080:1:exon

position:849937:1
position: 849937
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:850080:1
position: 850080
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:850334-850459:1:exon

position:850334:1
position: 850334
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:850459:1
position: 850459
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:852784-852996:1:exon

position:852784:1
position: 852784
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:852996:1
position: 852996
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:855235-855378:1:exon

position:855235:1
position: 855235
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:855378:1
position: 855378
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:856060-856179:1:exon

position:856060:1
position: 856060
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:856179:1
position: 856179
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:856778-856975:1:exon

position:856778:1
position: 856778
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:856975:1
position: 856975
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:857199-857290:1:exon

position:857199:1
position: 857199
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:857290:1
position: 857290
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:857600-857692:1:exon