Camarhynchus parvulus chromosome 28, STF_HiC, whole genome shotgun sequence.
type: Entry
definition: Camarhynchus parvulus chromosome 28, STF_HiC, whole genome shotgun sequence.
sequence version: NC_044598.1
sequence date: 2019-09-26
sequence: sequence
division: CON
label: NC_044598.1
type: RefSeq
SIO_000068: refseq
dblink: PRJNA566393
dblink: SAMEA5603054
keyword: WGS
keyword: RefSeq
source: Camarhynchus parvulus
organism: Camarhynchus parvulus
taxonomy: Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Passeriformes; Thraupidae; Camarhynchus.
comment: REFSEQ INFORMATION: The reference sequence is identical to\nLR595721.1.\nAssembly name: STF_HiC\nThe genomic sequence for this RefSeq record is from the\nwhole-genome assembly released by the UPPSALA UNIVERISTY on\n2019/09/06. The original whole-genome shotgun project has the\naccession CABFNF000000000.1.\n\n##Genome-Annotation-Data-START##\nAnnotation Provider :: NCBI\nAnnotation Status :: Full annotation\nAnnotation Name :: Camarhynchus parvulus Annotation\n Release 100\nAnnotation Version :: 100\nAnnotation Pipeline :: NCBI eukaryotic genome annotation\n pipeline\nAnnotation Software Version :: 8.2\nAnnotation Method :: Best-placed RefSeq; Gnomon\nFeatures Annotated :: Gene; mRNA; CDS; ncRNA\n##Genome-Annotation-Data-END##

sequence
subclass of: SO_0000340
sequence length: 5921243
topology: linear
so has quality: SO_0000987
location: 1..5921243
location: region:1-5921243:1
RO_0002162: 87175

NC_044598
type: RefSeq
SIO_000068: refseq

PRJNA566393
type: BioProject
SIO_000068: bioproject

SAMEA5603054
type: BioSample
SIO_000068: biosample

position:1:1
position: 1
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5921243:1
position: 5921243
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

feature:1-5921243:1:source
so part of: sequence
organism: Camarhynchus parvulus
mol type: genomic DNA
chromosome: 28

87175
type: Taxonomy
SIO_000068: taxonomy

CCDC124
type: Gene
subclass of: SO_0000704
RO_0002162: 87175
gene: CCDC124
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 3953..9176
location: region:3953-9176:1
so has part: feature:3953-9176:1:exon
subclass of: SO_0000010

115914271
type: Gene
SIO_000068: ncbigene

position:3953:1
position: 3953
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:9176:1
position: 9176
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3953-9176:1:exon

CCDC124
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 87175
gene: CCDC124
product: coiled-coil domain containing 124, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XM_030966705.1
SIO_010081: CCDC124
subclass of: SO_0000673
so part of: CCDC124
location: join(3953..3982,5070..5240,6049..6235,6829..6943,7935..9176)
location: region:3953-9176:1
so has part: feature:3953-3982:1:exon
so has part: feature:5070-5240:1:exon
so has part: feature:6049-6235:1:exon
so has part: feature:6829-6943:1:exon
so has part: feature:7935-9176:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3953-3982:1:exon

position:3982:1
position: 3982
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:5070-5240:1:exon

position:5070:1
position: 5070
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5240:1
position: 5240
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:6049-6235:1:exon

position:6049:1
position: 6049
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6235:1
position: 6235
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:6829-6943:1:exon

position:6829:1
position: 6829
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6943:1
position: 6943
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:7935-9176:1:exon

position:7935:1
position: 7935
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

CCDC124
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 87175
gene: CCDC124
product: coiled-coil domain containing 124, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_030966706.1
SIO_010081: CCDC124
subclass of: SO_0000673
so part of: CCDC124
location: join(4004..4134,5070..5240,6049..6235,6829..6943,7935..9176)
location: region:4004-9176:1
so has part: feature:4004-4134:1:exon
so has part: feature:5070-5240:1:exon
so has part: feature:6049-6235:1:exon
so has part: feature:6829-6943:1:exon
so has part: feature:7935-9176:1:exon

position:4004:1
position: 4004
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4004-4134:1:exon

position:4134:1
position: 4134
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:5070-5240:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:6049-6235:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:6829-6943:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:7935-9176:1:exon

CCDC124
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 87175
gene: CCDC124
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: coiled-coil domain-containing protein 124
translation: MPKKFQGENSKSAAARARRAEAKAAAEARRQQELEDELWKDEDKHVLRKEQRKEEREKRRLEQLERRKELQRLLEEEDSKLKGKSPKQGNPGKITRAQIEENVRKEQQQRENTDAGEKEKSHLELPLEENLNRRLPEEGAVEARSIEDAIAALSVSQPLERHPERRLRAAFAAFEELQLPRLRRDNPNMRLSQLRQLLKKEWMRSPENPLNQRHKPYNSHQ
SIO_010081: CCDC124
subclass of: SO_0000673
so part of: CCDC124
location: join(5082..5240,6049..6235,6829..6943,7935..8139)
location: region:5082-8139:1
so has part: feature:5082-5240:1:exon
so has part: feature:6049-6235:1:exon
so has part: feature:6829-6943:1:exon
so has part: feature:7935-8139:1:exon

XP_030822565.1
type: Protein
SIO_000068: ncbiprotein

position:5082:1
position: 5082
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:8139:1
position: 8139
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5082-5240:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:6049-6235:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:6829-6943:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:7935-8139:1:exon

CCDC124
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 87175
gene: CCDC124
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: coiled-coil domain-containing protein 124
translation: MPKKFQGENSKSAAARARRAEAKAAAEARRQQELEDELWKDEDKHVLRKEQRKEEREKRRLEQLERRKELQRLLEEEDSKLKGKSPKQGNPGKITRAQIEENVRKEQQQRENTDAGEKEKSHLELPLEENLNRRLPEEGAVEARSIEDAIAALSVSQPLERHPERRLRAAFAAFEELQLPRLRRDNPNMRLSQLRQLLKKEWMRSPENPLNQRHKPYNSHQ
SIO_010081: CCDC124
subclass of: SO_0000673
so part of: CCDC124
location: join(5082..5240,6049..6235,6829..6943,7935..8139)
location: region:5082-8139:1
so has part: feature:5082-5240:1:exon
so has part: feature:6049-6235:1:exon
so has part: feature:6829-6943:1:exon
so has part: feature:7935-8139:1:exon

XP_030822566.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:5082-5240:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:6049-6235:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:6829-6943:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:7935-8139:1:exon

KCNN1
type: Gene
subclass of: SO_0000704
RO_0002162: 87175
gene: KCNN1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 11379..27813
location: region:11379-27813:1
so has part: feature:11379-27813:1:exon
subclass of: SO_0000010

115914279
type: Gene
SIO_000068: ncbigene

position:11379:1
position: 11379
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:27813:1
position: 27813
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:11379-27813:1:exon

KCNN1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 87175
gene: KCNN1
product: potassium calcium-activated channel subfamily N member 1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, 6 Proteins, and 91% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_030966717.1
SIO_010081: KCNN1
subclass of: SO_0000673
so part of: KCNN1
location: join(11379..11606,17646..17755,19047..19460,19541..19636,20674..21092,23924..24065,24833..24943,25528..25655,26511..26519,26783..26852,27529..27813)
location: region:11379-27813:1
so has part: feature:11379-11606:1:exon
so has part: feature:17646-17755:1:exon
so has part: feature:19047-19460:1:exon
so has part: feature:19541-19636:1:exon
so has part: feature:20674-21092:1:exon
so has part: feature:23924-24065:1:exon
so has part: feature:24833-24943:1:exon
so has part: feature:25528-25655:1:exon
so has part: feature:26511-26519:1:exon
so has part: feature:26783-26852:1:exon
so has part: feature:27529-27813:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:11379-11606:1:exon

position:11606:1
position: 11606
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:17646-17755:1:exon

position:17646:1
position: 17646
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:17755:1
position: 17755
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:19047-19460:1:exon

position:19047:1
position: 19047
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:19460:1
position: 19460
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:19541-19636:1:exon

position:19541:1
position: 19541
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:19636:1
position: 19636
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:20674-21092:1:exon

position:20674:1
position: 20674
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:21092:1
position: 21092
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:23924-24065:1:exon

position:23924:1
position: 23924
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:24065:1
position: 24065
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:24833-24943:1:exon

position:24833:1
position: 24833
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:24943:1
position: 24943
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:25528-25655:1:exon

position:25528:1
position: 25528
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:25655:1
position: 25655
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:26511-26519:1:exon

position:26511:1
position: 26511
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:26519:1
position: 26519
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:26783-26852:1:exon

position:26783:1
position: 26783
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:26852:1
position: 26852
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:27529-27813:1:exon

position:27529:1
position: 27529
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

KCNN1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 87175
gene: KCNN1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: small conductance calcium-activated potassium channel protein 1
translation: MSSCRYNGGVARPRGPPSAARTPQPPHRDPQPPCPSPRLQVVVSRPEQPGTAEPGPAAAPPGQGAAEERRNQNIGYKLGHRRALFEKRKRLSDYALIFGMFGIVVMVTETELSWGVYTKESSYSFALKCLISLSTLILLGLIVMYHAREIQLFMVDNGADDWRIAMTSERVFFIALELLVCAIHPIPGQYLFTWTARLAFTYAASVAHADVDIILSIPMFLRLYLIGRVMLLHSKLFTDASSRSIGALNKINFNTRFVMKTLMTICPGTVLLVFSISSWIIAAWTVRVCERYHDKQEVTSNFLGAMWLISITFLSIGYGDMVPHTYCGKGVCLLTGIMGAGCTALVVAVVARKLELTKAEKHVHNFMMDTQLTKRVKNAAANVLRETWLIYKHTKLVKKIDHAKVRTHQRKFLQAIHQAQKLRSVKMEQRKLNDQANTLVDLAKTQSVMLELLSELQERHEELGRRLGALEAQLEALGGLLQALPALLGRALRQPPARPAPGTAPGTARDATAPCSPRHGSSDSARDSDSARAASDSG
SIO_010081: KCNN1
subclass of: SO_0000673
so part of: KCNN1
location: join(19104..19460,19541..19636,20674..21092,23924..24065,24833..24943,25528..25655,26511..26519,26783..26852,27529..27813)
location: region:19104-27813:1
so has part: feature:19104-19460:1:exon
so has part: feature:19541-19636:1:exon
so has part: feature:20674-21092:1:exon
so has part: feature:23924-24065:1:exon
so has part: feature:24833-24943:1:exon
so has part: feature:25528-25655:1:exon
so has part: feature:26511-26519:1:exon
so has part: feature:26783-26852:1:exon
so has part: feature:27529-27813:1:exon

XP_030822577.1
type: Protein
SIO_000068: ncbiprotein

position:19104:1
position: 19104
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:19104-19460:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:19541-19636:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:20674-21092:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:23924-24065:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:24833-24943:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:25528-25655:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:26511-26519:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:26783-26852:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:27529-27813:1:exon

OCLN
type: Gene
subclass of: SO_0000704
RO_0002162: 87175
gene: OCLN
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 31645..42623
location: region:31645-42623:1
so has part: feature:31645-42623:1:exon
subclass of: SO_0000010

115914303
type: Gene
SIO_000068: ncbigene

position:31645:1
position: 31645
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:42623:1
position: 42623
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:31645-42623:1:exon

OCLN
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 87175
gene: OCLN
product: occludin, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 ESTs, 9 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_030966762.1
SIO_010081: OCLN
subclass of: SO_0000673
so part of: OCLN
location: join(31645..31737,33797..34494,36669..36827,39419..39558,40240..40437,41168..41339,41885..41926,42040..42623)
location: region:31645-42623:1
so has part: feature:31645-31737:1:exon
so has part: feature:33797-34494:1:exon
so has part: feature:36669-36827:1:exon
so has part: feature:39419-39558:1:exon
so has part: feature:40240-40437:1:exon
so has part: feature:41168-41339:1:exon
so has part: feature:41885-41926:1:exon
so has part: feature:42040-42623:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:31645-31737:1:exon

position:31737:1
position: 31737
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:33797-34494:1:exon

position:33797:1
position: 33797
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:34494:1
position: 34494
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:36669-36827:1:exon

position:36669:1
position: 36669
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:36827:1
position: 36827
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:39419-39558:1:exon

position:39419:1
position: 39419
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:39558:1
position: 39558
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:40240-40437:1:exon

position:40240:1
position: 40240
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:40437:1
position: 40437
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:41168-41339:1:exon

position:41168:1
position: 41168
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:41339:1
position: 41339
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:41885-41926:1:exon

position:41885:1
position: 41885
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:41926:1
position: 41926
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:42040-42623:1:exon

position:42040:1
position: 42040
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

OCLN
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 87175
gene: OCLN
product: occludin, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 ESTs, 9 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_030966763.1
SIO_010081: OCLN
subclass of: SO_0000673
so part of: OCLN
location: join(31721..31737,33699..34494,36669..36827,39419..39558,40240..40437,41168..41339,41885..41926,42040..42623)
location: region:31721-42623:1
so has part: feature:31721-31737:1:exon
so has part: feature:33699-34494:1:exon
so has part: feature:36669-36827:1:exon
so has part: feature:39419-39558:1:exon
so has part: feature:40240-40437:1:exon
so has part: feature:41168-41339:1:exon
so has part: feature:41885-41926:1:exon
so has part: feature:42040-42623:1:exon

position:31721:1
position: 31721
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:31721-31737:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:33699-34494:1:exon

position:33699:1
position: 33699
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:36669-36827:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:39419-39558:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:40240-40437:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:41168-41339:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:41885-41926:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:42040-42623:1:exon

OCLN
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 87175
gene: OCLN
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: occludin
translation: MFTKKPYDSAYGPPATSYGPPTGDYGYDFGARSPPPGSYYIEDVPQHFYKWSSPPGLVRLLEGAVMLLCIAVFACVASTLAWDYGYGYGGVLGTGLGGFYGSGYYGSGVNYGYGYGGYYGGVTNPRAANGFMIAMAVLCFLAQLGLLVASLSKSGSSRSRRFYLVVIVVCAVLALVMLVASIVYVVGVNPQAQMSGGGYYYSPLLAMCSQVYAGGAVLNQYLYHYCTVDPQEAVAIACGFLTVLLLCLICVLAHKTRSKIWKYGKHNIYWDKIPAEPQGPDVEEWVKNVSSGTSVPDEAATVAYSEKGGTPGPAPPYSPPLYSDPPQKGWKSDPPSDPPSPPEEPDAAHPPHKPPARRGRRGRRQPEGSQGSQGSQYDTDPATAPESGDERDSEQWHRLYPPVSSPGTRQRYKAEFGQELRRYKELCAHMDGLNERLAQLAAQLDQVPEDSAQYQALAEEYNHLKDVKRSPEYQDKKRESKTLRNKLFHIKRMVSDYDKLRG
SIO_010081: OCLN
subclass of: SO_0000673
so part of: OCLN
location: join(33799..34494,36669..36827,39419..39558,40240..40437,41168..41339,41885..41926,42040..42141)
location: region:33799-42141:1
so has part: feature:33799-34494:1:exon
so has part: feature:36669-36827:1:exon
so has part: feature:39419-39558:1:exon
so has part: feature:40240-40437:1:exon
so has part: feature:41168-41339:1:exon
so has part: feature:41885-41926:1:exon
so has part: feature:42040-42141:1:exon

XP_030822622.1
type: Protein
SIO_000068: ncbiprotein

position:33799:1
position: 33799
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:42141:1
position: 42141
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:33799-34494:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:36669-36827:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:39419-39558:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:40240-40437:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:41168-41339:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:41885-41926:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:42040-42141:1:exon

OCLN
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 87175
gene: OCLN
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: occludin
translation: MFTKKPYDSAYGPPATSYGPPTGDYGYDFGARSPPPGSYYIEDVPQHFYKWSSPPGLVRLLEGAVMLLCIAVFACVASTLAWDYGYGYGGVLGTGLGGFYGSGYYGSGVNYGYGYGGYYGGVTNPRAANGFMIAMAVLCFLAQLGLLVASLSKSGSSRSRRFYLVVIVVCAVLALVMLVASIVYVVGVNPQAQMSGGGYYYSPLLAMCSQVYAGGAVLNQYLYHYCTVDPQEAVAIACGFLTVLLLCLICVLAHKTRSKIWKYGKHNIYWDKIPAEPQGPDVEEWVKNVSSGTSVPDEAATVAYSEKGGTPGPAPPYSPPLYSDPPQKGWKSDPPSDPPSPPEEPDAAHPPHKPPARRGRRGRRQPEGSQGSQGSQYDTDPATAPESGDERDSEQWHRLYPPVSSPGTRQRYKAEFGQELRRYKELCAHMDGLNERLAQLAAQLDQVPEDSAQYQALAEEYNHLKDVKRSPEYQDKKRESKTLRNKLFHIKRMVSDYDKLRG
SIO_010081: OCLN
subclass of: SO_0000673
so part of: OCLN
location: join(33799..34494,36669..36827,39419..39558,40240..40437,41168..41339,41885..41926,42040..42141)
location: region:33799-42141:1
so has part: feature:33799-34494:1:exon
so has part: feature:36669-36827:1:exon
so has part: feature:39419-39558:1:exon
so has part: feature:40240-40437:1:exon
so has part: feature:41168-41339:1:exon
so has part: feature:41885-41926:1:exon
so has part: feature:42040-42141:1:exon

XP_030822623.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:33799-34494:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:36669-36827:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:39419-39558:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:40240-40437:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:41168-41339:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:41885-41926:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:42040-42141:1:exon

NR2F6
type: Gene
subclass of: SO_0000704
RO_0002162: 87175
gene: NR2F6
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(42919..52306)
location: region:42919-52306:-1
so has part: feature:42919-52306:-1:exon
subclass of: SO_0000010

115914308
type: Gene
SIO_000068: ncbigene

position:42919:-1
position: 42919
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:52306:-1
position: 52306
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:42919-52306:-1:exon

NR2F6
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 87175
gene: NR2F6
product: nuclear receptor subfamily 2 group F member 6
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 2 ESTs, 27 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
transcript id: XM_030966770.1
SIO_010081: NR2F6
subclass of: SO_0000673
so part of: NR2F6
location: complement(join(42919..44481,46095..46631,47422..47516,51212..52306))
location: region:42919-52306:-1
so has part: feature:51212-52306:-1:exon
so has part: feature:47422-47516:-1:exon
so has part: feature:46095-46631:-1:exon
so has part: feature:42919-44481:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:51212-52306:-1:exon

position:51212:-1
position: 51212
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:47422-47516:-1:exon

position:47422:-1
position: 47422
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:47516:-1
position: 47516
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:46095-46631:-1:exon

position:46095:-1
position: 46095
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:46631:-1
position: 46631
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:42919-44481:-1:exon

position:44481:-1
position: 44481
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

NR2F6
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 87175
gene: NR2F6
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: nuclear receptor subfamily 2 group F member 6
translation: MAMVAGAWGEPNGGGAGGTGGGGGGGGGAEEAASPGGGGSDAEHGEEERPGAGADCVVCGDKSSGKHYGVFTCEGCKSFFKRSIRRNLSYTCRSNRDCQIDQHHRNQCQYCRLKKCFRVGMRKEAVQRGRIPPSHSSSSPNPLPAGDFFNGQPVSELISQLLRAEPYPAARYGSQYAQQQQPPGSVMGIDNICELAARLLFSTVEWARNIPFFPELPVSDQVALLRLSWSELFVLNAAQSALPLHMAPLLAAAGFHASPMSAERVVAFMDQIRVFQEQVEKLNRLQVDSAEYSCLKAIALFTPDACGLSDPAHVETLQEKAQVALTEYERSQFPSQPQRFGRLLLRLPALRAVPAALISQLFFMRLVGKTPIETLIRDMLLSGSTFNWPYGAGQ
SIO_010081: NR2F6
subclass of: SO_0000673
so part of: NR2F6
location: complement(join(44207..44481,46095..46631,47422..47516,51212..51489))
location: region:44207-51489:-1
so has part: feature:51212-51489:-1:exon
so has part: feature:47422-47516:-1:exon
so has part: feature:46095-46631:-1:exon
so has part: feature:44207-44481:-1:exon

XP_030822630.1
type: Protein
SIO_000068: ncbiprotein

position:44207:-1
position: 44207
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:51489:-1
position: 51489
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:51212-51489:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:47422-47516:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:46095-46631:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:44207-44481:-1:exon

USHBP1
type: Gene
subclass of: SO_0000704
RO_0002162: 87175
gene: USHBP1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(56142..63558)
location: region:56142-63558:-1
so has part: feature:56142-63558:-1:exon
subclass of: SO_0000010

115914412
type: Gene
SIO_000068: ncbigene

position:56142:-1
position: 56142
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:63558:-1
position: 63558
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:56142-63558:-1:exon

USHBP1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 87175
gene: USHBP1
product: USH1 protein network component harmonin binding protein 1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 96% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_030966941.1
SIO_010081: USHBP1
subclass of: SO_0000673
so part of: USHBP1
location: complement(join(56142..57079,57789..57911,58453..58544,58624..58854,59271..59503,59579..59735,60132..60211,60805..60945,61043..61119,61293..61493,61571..61755,61823..61972,62060..62124,62447..62637,62816..62870,63549..63558))
location: region:56142-63558:-1
so has part: feature:63549-63558:-1:exon
so has part: feature:62816-62870:-1:exon
so has part: feature:62447-62637:-1:exon
so has part: feature:62060-62124:-1:exon
so has part: feature:61823-61972:-1:exon
so has part: feature:61571-61755:-1:exon
so has part: feature:61293-61493:-1:exon
so has part: feature:61043-61119:-1:exon
so has part: feature:60805-60945:-1:exon
so has part: feature:60132-60211:-1:exon
so has part: feature:59579-59735:-1:exon
so has part: feature:59271-59503:-1:exon
so has part: feature:58624-58854:-1:exon
so has part: feature:58453-58544:-1:exon
so has part: feature:57789-57911:-1:exon
so has part: feature:56142-57079:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:63549-63558:-1:exon

position:63549:-1
position: 63549
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:62816-62870:-1:exon

position:62816:-1
position: 62816
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:62870:-1
position: 62870
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:62447-62637:-1:exon

position:62447:-1
position: 62447
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:62637:-1
position: 62637
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:62060-62124:-1:exon

position:62060:-1
position: 62060
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:62124:-1
position: 62124
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:61823-61972:-1:exon

position:61823:-1
position: 61823
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:61972:-1
position: 61972
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:61571-61755:-1:exon

position:61571:-1
position: 61571
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:61755:-1
position: 61755
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:61293-61493:-1:exon

position:61293:-1
position: 61293
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:61493:-1
position: 61493
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:61043-61119:-1:exon

position:61043:-1
position: 61043
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:61119:-1
position: 61119
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:60805-60945:-1:exon

position:60805:-1
position: 60805
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:60945:-1
position: 60945
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:60132-60211:-1:exon

position:60132:-1
position: 60132
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:60211:-1
position: 60211
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:59579-59735:-1:exon

position:59579:-1
position: 59579
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:59735:-1
position: 59735
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:59271-59503:-1:exon

position:59271:-1
position: 59271
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:59503:-1
position: 59503
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:58624-58854:-1:exon

position:58624:-1
position: 58624
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:58854:-1
position: 58854
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:58453-58544:-1:exon

position:58453:-1
position: 58453
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:58544:-1
position: 58544
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:57789-57911:-1:exon

position:57789:-1
position: 57789
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:57911:-1
position: 57911
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:56142-57079:-1:exon

position:57079:-1
position: 57079
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

USHBP1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 87175
gene: USHBP1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: Usher syndrome type-1C protein-binding protein 1
translation: MEEESPVGATRSAPRAERDTGTPARPPRQEEEEEEEEEEDVAGDTEDIPLLAGAAPRQQRRQQRHAREDEDGWEATATVPTVTAASPDARSPDLFERLQHAVSSLERAAFSRHRQPPRGPPPAPPGTRALQVSLHARRAGHRAGARCWRRRRPGLRRGAAAAAARNASLRAALGQRDEELGQATAALRALRGERERLQGKVRDLREALARLEEAGESGSDTPGVGDAAGTGDTSGVGDTPGNGDIPGVGDTPGNGDTPGPSSPPGHRPRAPLSPQPSAGPGREQEERLQQLQGALARLQEANRELLAALGECKGEAERLSMELGRREARCSGLRLALSCSERCGGAYAALLDLVRAKMAPEGGTRGGTAAELSPGSERGPGPATPEPSPGSERGPGPATPEPAEPDSREDPADSPGAHSPGRWRRRRERCGSSSGGSAPSRRRCRGPCWTPPSPRSPRERDPPGPGGAGAAGSAGAAARLEAAGEGGAAAGAGGAQGGAGGAADAAAAGSEGEASAGAAAGRARAPRGRAAPPAAGTGAGAAPGAAPGPGTGVGTGPSLRQQLRQQLRQQLRGGGADGAGGSDGPGEPPGPRENKGGAAPDPGQDGAAAWPCPGAGAGPGAGQRCQPRPAGAQRHRHPGAPAGAQLAGPGVPRGAAQAGGAAAAAAGAGGGAAGPARPQGASAGPDTAGAGARRRRDLHLGSPGNPWGDSEIRGETRKFVGKFGNSWGAPEVHGETRKFAGKFGNLWGDSEMPGETQKFVGRFRNPWGDSEICGEIWKSLGILGIPGEPRKFVGRLRNSWGDSEIREDTRKSMGKSRNSVGKLGNLWGDLEIPGEIGKFVGILGNSWGN
SIO_010081: USHBP1
subclass of: SO_0000673
so part of: USHBP1
location: complement(join(56465..57079,57789..57911,58453..58544,58624..58854,59271..59503,59579..59735,60132..60211,60805..60945,61043..61119,61293..61493,61571..61755,61823..61972,62060..62124,62447..62637,62816..62824))
location: region:56465-62824:-1
so has part: feature:62816-62824:-1:exon
so has part: feature:62447-62637:-1:exon
so has part: feature:62060-62124:-1:exon
so has part: feature:61823-61972:-1:exon
so has part: feature:61571-61755:-1:exon
so has part: feature:61293-61493:-1:exon
so has part: feature:61043-61119:-1:exon
so has part: feature:60805-60945:-1:exon
so has part: feature:60132-60211:-1:exon
so has part: feature:59579-59735:-1:exon
so has part: feature:59271-59503:-1:exon
so has part: feature:58624-58854:-1:exon
so has part: feature:58453-58544:-1:exon
so has part: feature:57789-57911:-1:exon
so has part: feature:56465-57079:-1:exon

XP_030822801.1
type: Protein
SIO_000068: ncbiprotein

position:56465:-1
position: 56465
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:62824:-1
position: 62824
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:62816-62824:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:62447-62637:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:62060-62124:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:61823-61972:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:61571-61755:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:61293-61493:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:61043-61119:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:60805-60945:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:60132-60211:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:59579-59735:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:59271-59503:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:58624-58854:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:58453-58544:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:57789-57911:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:56465-57079:-1:exon

BABAM1
type: Gene
subclass of: SO_0000704
RO_0002162: 87175
gene: BABAM1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 64792..70328
location: region:64792-70328:1
so has part: feature:64792-70328:1:exon
subclass of: SO_0000010

115914413
type: Gene
SIO_000068: ncbigene

position:64792:1
position: 64792
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:70328:1
position: 70328
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:64792-70328:1:exon

BABAM1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 87175
gene: BABAM1
product: BRISC and BRCA1 A complex member 1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 13 Proteins, and 98% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_030966943.1
SIO_010081: BABAM1
subclass of: SO_0000673
so part of: BABAM1
location: join(64792..64812,65401..65787,66813..66871,67204..67324,67845..67851,67992..68016,68496..68625,69060..69146,69843..70328)
location: region:64792-70328:1
so has part: feature:64792-64812:1:exon
so has part: feature:65401-65787:1:exon
so has part: feature:66813-66871:1:exon
so has part: feature:67204-67324:1:exon
so has part: feature:67845-67851:1:exon
so has part: feature:67992-68016:1:exon
so has part: feature:68496-68625:1:exon
so has part: feature:69060-69146:1:exon
so has part: feature:69843-70328:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:64792-64812:1:exon

position:64812:1
position: 64812
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:65401-65787:1:exon

position:65401:1
position: 65401
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:65787:1
position: 65787
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:66813-66871:1:exon

position:66813:1
position: 66813
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:66871:1
position: 66871
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:67204-67324:1:exon

position:67204:1
position: 67204
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:67324:1
position: 67324
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:67845-67851:1:exon

position:67845:1
position: 67845
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:67851:1
position: 67851
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:67992-68016:1:exon

position:67992:1
position: 67992
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:68016:1
position: 68016
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:68496-68625:1:exon

position:68496:1
position: 68496
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:68625:1
position: 68625
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:69060-69146:1:exon

position:69060:1
position: 69060
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:69146:1
position: 69146
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:69843-70328:1:exon

position:69843:1
position: 69843
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

BABAM1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 87175
gene: BABAM1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: BRISC and BRCA1-A complex member 1
translation: MDTSEPGSAAEDEEEKIPEVRPRTRSNPEGAEDRAPSGPGSVGNRGEAPGNRAEAPGNRSEGEGEAASAGHSPPGQPGTAWHGPGSHGQQHGEVTVRTPRVNCPEKVIICLDLAEEMAVPKLESFNGCRSNALTVAQKMIEMFVRTKHKIDKSHEFALVVVNNDATWSFNLDGLFNLIQQKVELPVTDNVQTIPPPFVVRTILVFGRPRCQPHFCGGEHVKKLLQCPYFFFDVVYIHNGVDEKEDESSWKDMFGFFGSLDTKGTNYKYEVALAGPALELHNCMAKLLAHPLQRPCQSHAHYGLLDGGTAPRARPPTDTGDRPPLRGQRHPLRGQP
SIO_010081: BABAM1
subclass of: SO_0000673
so part of: BABAM1
location: join(65467..65787,66813..66871,67204..67324,67845..67851,67992..68016,68496..68625,69060..69146,69843..70100)
location: region:65467-70100:1
so has part: feature:65467-65787:1:exon
so has part: feature:66813-66871:1:exon
so has part: feature:67204-67324:1:exon
so has part: feature:67845-67851:1:exon
so has part: feature:67992-68016:1:exon
so has part: feature:68496-68625:1:exon
so has part: feature:69060-69146:1:exon
so has part: feature:69843-70100:1:exon

XP_030822803.1
type: Protein
SIO_000068: ncbiprotein

position:65467:1
position: 65467
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:70100:1
position: 70100
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:65467-65787:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:66813-66871:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:67204-67324:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:67845-67851:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:67992-68016:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:68496-68625:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:69060-69146:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:69843-70100:1:exon

PLVAP
type: Gene
subclass of: SO_0000704
RO_0002162: 87175
gene: PLVAP
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 78775..82706
location: region:78775-82706:1
so has part: feature:78775-82706:1:exon
subclass of: SO_0000010

115914305
type: Gene
SIO_000068: ncbigene

position:78775:1
position: 78775
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:82706:1
position: 82706
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:78775-82706:1:exon

PLVAP
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 87175
gene: PLVAP
product: plasmalemma vesicle associated protein, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_030966766.1
SIO_010081: PLVAP
subclass of: SO_0000673
so part of: PLVAP
location: join(78775..79156,79785..79863,80089..80681,81526..81646,82343..82421,82511..82706)
location: region:78775-82706:1
so has part: feature:78775-79156:1:exon
so has part: feature:79785-79863:1:exon
so has part: feature:80089-80681:1:exon
so has part: feature:81526-81646:1:exon
so has part: feature:82343-82421:1:exon
so has part: feature:82511-82706:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:78775-79156:1:exon

position:79156:1
position: 79156
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:79785-79863:1:exon

position:79785:1
position: 79785
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:79863:1
position: 79863
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:80089-80681:1:exon

position:80089:1
position: 80089
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:80681:1
position: 80681
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:81526-81646:1:exon

position:81526:1
position: 81526
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:81646:1
position: 81646
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:82343-82421:1:exon

position:82343:1
position: 82343
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:82421:1
position: 82421
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:82511-82706:1:exon

position:82511:1
position: 82511
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

PLVAP
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 87175
gene: PLVAP
product: plasmalemma vesicle associated protein, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_030966767.1
SIO_010081: PLVAP
subclass of: SO_0000673
so part of: PLVAP
location: join(78775..79156,79785..79863,80089..80681,81526..81646,82346..82421,82511..82706)
location: region:78775-82706:1
so has part: feature:78775-79156:1:exon
so has part: feature:79785-79863:1:exon
so has part: feature:80089-80681:1:exon
so has part: feature:81526-81646:1:exon
so has part: feature:82346-82421:1:exon
so has part: feature:82511-82706:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:78775-79156:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:79785-79863:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:80089-80681:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:81526-81646:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:82346-82421:1:exon

position:82346:1
position: 82346
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:82511-82706:1:exon

PLVAP
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 87175
gene: PLVAP
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: plasmalemma vesicle-associated protein isoform X1
translation: MEKSSFAMAKFGLEHKEAMPKRDCGFYLKYIFLFTSLIQFLIILGLVLFMVYGNAQAGTDTHLRLLEEQVQSHYRRIVALGATNANLSRTLNATLKDRDKAQGMALKVQRELEKCNSSQASSSIPQLRELLFRQVRLTECQVITTLINSTCTAEKLQLQRQLDQASSSKRSLEDSRQQSQAELTKATQERDKCQQDLQSASTEGHLSRMELEVHKQRCSSLQSDVSEKILRVLDLAKQYQCKEAEKELGQIRERVEELLRRQKERDSLFVWRSSCELSVQQCRHNCSRDTQELQQRIQRLEKRQRDGEEERKRLQAEKEKVGKELEEKRKAAAAMEESLRQQLGVCMGTKMSHLDLPGSRGPGSAARSGSFPGTGTYMELLKNPGTLGTMAGMQNPAELQQMLQLMEQYTATLKNASG
SIO_010081: PLVAP
subclass of: SO_0000673
so part of: PLVAP
location: join(78779..79156,79785..79863,80089..80681,81526..81646,82343..82421,82511..82517)
location: region:78779-82517:1
so has part: feature:78779-79156:1:exon
so has part: feature:79785-79863:1:exon
so has part: feature:80089-80681:1:exon
so has part: feature:81526-81646:1:exon
so has part: feature:82343-82421:1:exon
so has part: feature:82511-82517:1:exon

XP_030822626.1
type: Protein
SIO_000068: ncbiprotein

position:78779:1
position: 78779
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:82517:1
position: 82517
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:78779-79156:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:79785-79863:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:80089-80681:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:81526-81646:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:82343-82421:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:82511-82517:1:exon

PLVAP
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 87175
gene: PLVAP
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: plasmalemma vesicle-associated protein isoform X2
translation: MEKSSFAMAKFGLEHKEAMPKRDCGFYLKYIFLFTSLIQFLIILGLVLFMVYGNAQAGTDTHLRLLEEQVQSHYRRIVALGATNANLSRTLNATLKDRDKAQGMALKVQRELEKCNSSQASSSIPQLRELLFRQVRLTECQVITTLINSTCTAEKLQLQRQLDQASSSKRSLEDSRQQSQAELTKATQERDKCQQDLQSASTEGHLSRMELEVHKQRCSSLQSDVSEKILRVLDLAKQYQCKEAEKELGQIRERVEELLRRQKERDSLFVWRSSCELSVQQCRHNCSRDTQELQQRIQRLEKRQRDGEEERKRLQAEKEKVGKELEEKRKAAAAMEESLRQQLGVCMGTKMSHLDLPGSRGPGSAARSGSFPGTGTYMELLKNPGTLGTMGMQNPAELQQMLQLMEQYTATLKNASG
SIO_010081: PLVAP
subclass of: SO_0000673
so part of: PLVAP
location: join(78779..79156,79785..79863,80089..80681,81526..81646,82346..82421,82511..82517)
location: region:78779-82517:1
so has part: feature:78779-79156:1:exon
so has part: feature:79785-79863:1:exon
so has part: feature:80089-80681:1:exon
so has part: feature:81526-81646:1:exon
so has part: feature:82346-82421:1:exon
so has part: feature:82511-82517:1:exon

XP_030822627.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:78779-79156:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:79785-79863:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:80089-80681:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:81526-81646:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:82346-82421:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:82511-82517:1:exon

GTPBP3
type: Gene
subclass of: SO_0000704
RO_0002162: 87175
gene: GTPBP3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(83831..89710)
location: region:83831-89710:-1
so has part: feature:83831-89710:-1:exon
subclass of: SO_0000010

115914304
type: Gene
SIO_000068: ncbigene

position:83831:-1
position: 83831
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:89710:-1
position: 89710
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:83831-89710:-1:exon

GTPBP3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 87175
gene: GTPBP3
product: GTP binding protein 3, mitochondrial
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 7 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_030966765.1
SIO_010081: GTPBP3
subclass of: SO_0000673
so part of: GTPBP3
location: complement(join(83831..84123,85218..85487,85582..85747,86283..86426,87070..87142,87384..87586,88116..88202,88688..88965,89657..89710))
location: region:83831-89710:-1
so has part: feature:89657-89710:-1:exon
so has part: feature:88688-88965:-1:exon
so has part: feature:88116-88202:-1:exon
so has part: feature:87384-87586:-1:exon
so has part: feature:87070-87142:-1:exon
so has part: feature:86283-86426:-1:exon
so has part: feature:85582-85747:-1:exon
so has part: feature:85218-85487:-1:exon
so has part: feature:83831-84123:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:89657-89710:-1:exon

position:89657:-1
position: 89657
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:88688-88965:-1:exon

position:88688:-1
position: 88688
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:88965:-1
position: 88965
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:88116-88202:-1:exon

position:88116:-1
position: 88116
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:88202:-1
position: 88202
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:87384-87586:-1:exon

position:87384:-1
position: 87384
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:87586:-1
position: 87586
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:87070-87142:-1:exon

position:87070:-1
position: 87070
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:87142:-1
position: 87142
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:86283-86426:-1:exon

position:86283:-1
position: 86283
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:86426:-1
position: 86426
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:85582-85747:-1:exon

position:85582:-1
position: 85582
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:85747:-1
position: 85747
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:85218-85487:-1:exon

position:85218:-1
position: 85218
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:85487:-1
position: 85487
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:83831-84123:-1:exon

position:84123:-1
position: 84123
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

GTPBP3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 87175
gene: GTPBP3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: tRNA modification GTPase GTPBP3, mitochondrial
translation: MALSGAVRAARGRCARALSSAVPPGAGATRGAGATRGTGDTIFALSSAPGRCGVAVIRASGPGSGAALRSLTGSPEPPARVMALRRIRDPQSAESLDRGLVVWFPGPHSFTGEDCAELHVHGGPAVVSGVLRALGRLPGLRPAEPGEFTRRAFAHGKLDLTAAEGLRDLIGAETEAQRRQALRQMDGELGRLYQRWSHALTQALAHLEAYIDFSEDDNVEEEVLNQVRVTVRALLHELRGHLRDGRRGELLRGGVRAVIAGPPNAGKSSLLNLLCRRPAAIVSPTAGTTRDVLEVALDIGGYPLVLSDTAGLRQATDPVEREGVARARARLCQADLVLAVLDATSVPPTPVALGAALAALEPPPGTPCVLVLNKADLLGGHRASPSATGAQGPPATLLSCKTGEGLEALLELLTQQLAQLCGDPLLGSPSLTQSRHSRHLGACAAALERFGDLGDSGDLAVAAEQLRVARRELGRITGHVGAEDVLDIIFRDFCVGK
SIO_010081: GTPBP3
subclass of: SO_0000673
so part of: GTPBP3
location: complement(join(83889..84123,85218..85487,85582..85747,86283..86426,87070..87142,87384..87586,88116..88202,88688..88965,89657..89694))
location: region:83889-89694:-1
so has part: feature:89657-89694:-1:exon
so has part: feature:88688-88965:-1:exon
so has part: feature:88116-88202:-1:exon
so has part: feature:87384-87586:-1:exon
so has part: feature:87070-87142:-1:exon
so has part: feature:86283-86426:-1:exon
so has part: feature:85582-85747:-1:exon
so has part: feature:85218-85487:-1:exon
so has part: feature:83889-84123:-1:exon

XP_030822625.1
type: Protein
SIO_000068: ncbiprotein

position:83889:-1
position: 83889
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:89694:-1
position: 89694
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:89657-89694:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:88688-88965:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:88116-88202:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:87384-87586:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:87070-87142:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:86283-86426:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:85582-85747:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:85218-85487:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:83889-84123:-1:exon

ANO8
type: Gene
subclass of: SO_0000704
RO_0002162: 87175
gene: ANO8
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 91481..107815
location: region:91481-107815:1
so has part: feature:91481-107815:1:exon
subclass of: SO_0000010

115914414
type: Gene
SIO_000068: ncbigene

position:91481:1
position: 91481
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:107815:1
position: 107815
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:91481-107815:1:exon

ANO8
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 87175
gene: ANO8
product: anoctamin 8
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 91% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_030966944.1
SIO_010081: ANO8
subclass of: SO_0000673
so part of: ANO8
location: join(91481..91583,93985..94095,94899..95031,95446..95584,96623..96719,98088..98215,99016..99177,100184..100336,100623..100749,100830..100885,101440..101514,103050..103712,104024..104215,105194..105325,106287..106397,107153..107815)
location: region:91481-107815:1
so has part: feature:91481-91583:1:exon
so has part: feature:93985-94095:1:exon
so has part: feature:94899-95031:1:exon
so has part: feature:95446-95584:1:exon
so has part: feature:96623-96719:1:exon
so has part: feature:98088-98215:1:exon
so has part: feature:99016-99177:1:exon
so has part: feature:100184-100336:1:exon
so has part: feature:100623-100749:1:exon
so has part: feature:100830-100885:1:exon
so has part: feature:101440-101514:1:exon
so has part: feature:103050-103712:1:exon
so has part: feature:104024-104215:1:exon
so has part: feature:105194-105325:1:exon
so has part: feature:106287-106397:1:exon
so has part: feature:107153-107815:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:91481-91583:1:exon

position:91583:1
position: 91583
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:93985-94095:1:exon

position:93985:1
position: 93985
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:94095:1
position: 94095
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:94899-95031:1:exon

position:94899:1
position: 94899
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:95031:1
position: 95031
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:95446-95584:1:exon

position:95446:1
position: 95446
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:95584:1
position: 95584
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:96623-96719:1:exon

position:96623:1
position: 96623
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:96719:1
position: 96719
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:98088-98215:1:exon

position:98088:1
position: 98088
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:98215:1
position: 98215
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:99016-99177:1:exon

position:99016:1
position: 99016
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:99177:1
position: 99177
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:100184-100336:1:exon

position:100184:1
position: 100184
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:100336:1
position: 100336
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:100623-100749:1:exon

position:100623:1
position: 100623
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:100749:1
position: 100749
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:100830-100885:1:exon

position:100830:1
position: 100830
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:100885:1
position: 100885
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:101440-101514:1:exon

position:101440:1
position: 101440
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:101514:1
position: 101514
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:103050-103712:1:exon

position:103050:1
position: 103050
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:103712:1
position: 103712
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:104024-104215:1:exon

position:104024:1
position: 104024
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:104215:1
position: 104215
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:105194-105325:1:exon

position:105194:1
position: 105194
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:105325:1
position: 105325
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:106287-106397:1:exon

position:106287:1
position: 106287
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:106397:1
position: 106397
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:107153-107815:1:exon

position:107153:1
position: 107153
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

ANO8
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 87175
gene: ANO8
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: anoctamin-8
translation: MPEAAAAAAQDGERPRRGPAAEERAEPAAPTGVLDKLFGKRLLQAGRYIMSHKAWMKTVPTENCDVLMTFPDSTDDHTLLWLLNHIRLGIPELIVQVRHHRHTRVYAFFLTATYESLLRGADELGLRKPVKAEFGGGTRGFSCEEDFIYENIDNELGFFSSQERQSIIRYWLENLRAKQGESLHNIHFLEGQPINDICDYFGVKIAMYFAWLGFYTSAMVYPAVFGSILYSFTDSDQTSQDISCVVFAIFNVIWATLFLEEWKRRGAEFAYKWGTLDTPAESLEEPRPQFRGTKRISPVTSAEEFYYPPWKRLLFQSLVSLPVCLACLTLVFLLMLGCFQLQELVLSIQELPRVLRFLPKIILAVIVTACDELYKKVALWLNDMENYRLQSAYEKHLIIKMVLFQFVNSYLSLFYIGFYLKDMERLKEMLATLLITRQFLQNAREVAQPHLYRRLRRGELSARSLRELGRALLRLLGPRPAPRGPAEGKRCLNGGCGVPEEEEEEEAAAGGEEERRGSDSEEESALLDCGLKLKKVSFIERAERRAEPAGSEDEPFLEEGSPTMVEKGMDPAAVFELCEEEEEEAEAQPGSPGGAAEPAVLARRRRREEEEGEEEGRKRNRASWIDPPEEDYSTQLTQAEVESCMKKYEDTFQDYQEMFIQFAYVVLFSSAFPLAAACALLNNVLEIRSDAFKLCTGLQRPFGQRVASIGHWQKVMEAMGVLAIVVNCYLIAQCGQLQRLFPGLSPQAAIVCVVVLEHFALLLKYVIQVAIPDIPAWVAEEMAKLEYQRREAFKKHERQAQHHFQQQQRRKREEEERQRHAELQARRDRDPARDEATKAEATGQDPAHDKGQAKGKSSGGSSAHGPDKPKRPSSLLATNNVMKLKQIIPLQGKFLSGGTGAAGTATARSPQSPTGSENKLPGFLSFKFLKSPETKRDAGTEKVQSPTKPFNPGKLFNFGKSEGLGANGGAAGASPQPRAGPSADAGPGKSHLNEEGAREEAENRAEEEGGGARL
SIO_010081: ANO8
subclass of: SO_0000673
so part of: ANO8
location: join(91481..91583,93985..94095,94899..95031,95446..95584,96623..96719,98088..98215,99016..99177,100184..100336,100623..100749,100830..100885,101440..101514,103050..103712,104024..104215,105194..105325,106287..106397,107153..107815)
location: region:91481-107815:1
so has part: feature:91481-91583:1:exon
so has part: feature:93985-94095:1:exon
so has part: feature:94899-95031:1:exon
so has part: feature:95446-95584:1:exon
so has part: feature:96623-96719:1:exon
so has part: feature:98088-98215:1:exon
so has part: feature:99016-99177:1:exon
so has part: feature:100184-100336:1:exon
so has part: feature:100623-100749:1:exon
so has part: feature:100830-100885:1:exon
so has part: feature:101440-101514:1:exon
so has part: feature:103050-103712:1:exon
so has part: feature:104024-104215:1:exon
so has part: feature:105194-105325:1:exon
so has part: feature:106287-106397:1:exon
so has part: feature:107153-107815:1:exon

XP_030822804.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:91481-91583:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:93985-94095:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:94899-95031:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:95446-95584:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:96623-96719:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:98088-98215:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:99016-99177:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:100184-100336:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:100623-100749:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:100830-100885:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:101440-101514:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:103050-103712:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:104024-104215:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:105194-105325:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:106287-106397:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:107153-107815:1:exon

DDA1
type: Gene
subclass of: SO_0000704
RO_0002162: 87175
gene: DDA1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(111395..116688)
location: region:111395-116688:-1
so has part: feature:111395-116688:-1:exon
subclass of: SO_0000010

115914312
type: Gene
SIO_000068: ncbigene

position:111395:-1
position: 111395
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:116688:-1
position: 116688
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:111395-116688:-1:exon

DDA1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 87175
gene: DDA1
product: DET1 and DDB1 associated 1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 12 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
transcript id: XM_030966775.1
SIO_010081: DDA1
subclass of: SO_0000673
so part of: DDA1
location: complement(join(111395..113682,114297..114358,115004..115055,115641..115721,116626..116688))
location: region:111395-116688:-1
so has part: feature:116626-116688:-1:exon
so has part: feature:115641-115721:-1:exon
so has part: feature:115004-115055:-1:exon
so has part: feature:114297-114358:-1:exon
so has part: feature:111395-113682:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:116626-116688:-1:exon

position:116626:-1
position: 116626
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:115641-115721:-1:exon

position:115641:-1
position: 115641
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:115721:-1
position: 115721
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:115004-115055:-1:exon

position:115004:-1
position: 115004
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:115055:-1
position: 115055
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:114297-114358:-1:exon

position:114297:-1
position: 114297
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:114358:-1
position: 114358
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:111395-113682:-1:exon

position:113682:-1
position: 113682
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

DDA1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 87175
gene: DDA1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: DET1- and DDB1-associated protein 1
translation: MADFLKGLPVYNKSNFSRFHADSVCKASNRRPSVYLPTREFPSEQIIVTEKTNILLRYLHQQWDKKNAAKKREQEQGELEGENSAPPRKIARTGSQDMTEDT
SIO_010081: DDA1
subclass of: SO_0000673
so part of: DDA1
location: complement(join(113572..113682,114297..114358,115004..115055,115641..115721,116626..116628))
location: region:113572-116628:-1
so has part: feature:116626-116628:-1:exon
so has part: feature:115641-115721:-1:exon
so has part: feature:115004-115055:-1:exon
so has part: feature:114297-114358:-1:exon
so has part: feature:113572-113682:-1:exon

XP_030822635.1
type: Protein
SIO_000068: ncbiprotein

position:113572:-1
position: 113572
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:116628:-1
position: 116628
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:116626-116628:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:115641-115721:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:115004-115055:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:114297-114358:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:113572-113682:-1:exon

MRPL34
type: Gene
subclass of: SO_0000704
RO_0002162: 87175
gene: MRPL34
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(117123..117787)
location: region:117123-117787:-1
so has part: feature:117123-117787:-1:exon
subclass of: SO_0000010

115914311
type: Gene
SIO_000068: ncbigene

position:117123:-1
position: 117123
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:117787:-1
position: 117787
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:117123-117787:-1:exon

MRPL34
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 87175
gene: MRPL34
product: mitochondrial ribosomal protein L34
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 98% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
transcript id: XM_030966774.1
SIO_010081: MRPL34
subclass of: SO_0000673
so part of: MRPL34
location: complement(join(117123..117619,117711..117787))
location: region:117123-117787:-1
so has part: feature:117711-117787:-1:exon
so has part: feature:117123-117619:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:117711-117787:-1:exon

position:117711:-1
position: 117711
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:117123-117619:-1:exon

position:117619:-1
position: 117619
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

MRPL34
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 87175
gene: MRPL34
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: 39S ribosomal protein L34, mitochondrial
translation: MGSGVVGGRSKMAALGAVWARAGSRSFSPLRGFPFPLLPNALEPLAGTSNAAVLCRVPVPAWNFRQIRGKSRGNEYQPNNWKRKKTHGWIKRISTPGGIAVILRRMLKGRKSLSH
SIO_010081: MRPL34
subclass of: SO_0000673
so part of: MRPL34
location: complement(join(117349..117619,117711..117787))
location: region:117349-117787:-1
so has part: feature:117711-117787:-1:exon
so has part: feature:117349-117619:-1:exon

XP_030822634.1
type: Protein
SIO_000068: ncbiprotein

position:117349:-1
position: 117349
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:117711-117787:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:117349-117619:-1:exon

ABHD8
type: Gene
subclass of: SO_0000704
RO_0002162: 87175
gene: ABHD8
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 120231..128401
location: region:120231-128401:1
so has part: feature:120231-128401:1:exon
subclass of: SO_0000010

115914307
type: Gene
SIO_000068: ncbigene

position:120231:1
position: 120231
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:128401:1
position: 128401
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:120231-128401:1:exon

ABHD8
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 87175
gene: ABHD8
product: abhydrolase domain containing 8
exception: unclassified transcription discrepancy
note: The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: inserted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 98% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_030966769.1
SIO_010081: ABHD8
subclass of: SO_0000673
so part of: ABHD8
location: join(120231..120467,124147..124836,126456..126626,127264..127480,128238..128401)
location: region:120231-128401:1
so has part: feature:120231-120467:1:exon
so has part: feature:124147-124836:1:exon
so has part: feature:126456-126626:1:exon
so has part: feature:127264-127480:1:exon
so has part: feature:128238-128401:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:120231-120467:1:exon

position:120467:1
position: 120467
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:124147-124836:1:exon

position:124147:1
position: 124147
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:124836:1
position: 124836
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:126456-126626:1:exon

position:126456:1
position: 126456
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:126626:1
position: 126626
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:127264-127480:1:exon

position:127264:1
position: 127264
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:127480:1
position: 127480
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:128238-128401:1:exon

position:128238:1
position: 128238
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

ABHD8
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 87175
gene: ABHD8
exception: unclassified translation discrepancy
note: The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: inserted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: LOW QUALITY PROTEIN: protein ABHD8
translation: MLTSITDGFLCCLLGKTPNAVGPLDSVESSDGFTFLEVKPGRILRIHHSAPERPAAPELPAPSPERGAVRCQRRITLYRNGQLLIENLGEASRPRAPGARRARCPRPTASRXAPEPAGAAAKRRKRKPKRVVTVDCKKRITSCKGTHGDVVLFFIHGVGGSLDIWKEQLEFFSKLGYEVVAPDLAGHGCSSAPPVAAAYTFYALAEDMRAVFKRYAKKRNILIGHSYGVSFCTFLAHEYPELVHKVIMINGGGPTALEPSLCSIFNLPPCVLHCLSPCLAWSFLKAGFARQGAKEKQLLKEGNAFNVSSFVLRATMSGQYWPEGDELYHAELAVPVLLVHGMHDKFVPIEEDQRMAEILLIAFLKVIDEGSHMVMLECPDTVNTLLHEFVLWEPDTPAPRGDGDTK
SIO_010081: ABHD8
subclass of: SO_0000673
so part of: ABHD8
location: join(124155..124836,126456..126626,127264..127480,128238..128387)
location: region:124155-128387:1
so has part: feature:124155-124836:1:exon
so has part: feature:126456-126626:1:exon
so has part: feature:127264-127480:1:exon
so has part: feature:128238-128387:1:exon

XP_030822629.1
type: Protein
SIO_000068: ncbiprotein

position:124155:1
position: 124155
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:128387:1
position: 128387
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:124155-124836:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:126456-126626:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:127264-127480:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:128238-128387:1:exon

CILP2
type: Gene
subclass of: SO_0000704
RO_0002162: 87175
gene: CILP2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(137959..146979)
location: region:137959-146979:-1
so has part: feature:137959-146979:-1:exon
subclass of: SO_0000010

115914415
type: Gene
SIO_000068: ncbigene

position:137959:-1
position: 137959
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:146979:-1
position: 146979
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:137959-146979:-1:exon

CILP2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 87175
gene: CILP2
product: cartilage intermediate layer protein 2
exception: unclassified transcription discrepancy
note: The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: deleted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 7 Proteins
transcript id: XM_030966945.1
SIO_010081: CILP2
subclass of: SO_0000673
so part of: CILP2
location: complement(join(137959..140342,140424..140581,140673..140781,140866..141348,141903..142085,142679..142952,143518..143616,144945..145439,146808..146979))
location: region:137959-146979:-1
so has part: feature:146808-146979:-1:exon
so has part: feature:144945-145439:-1:exon
so has part: feature:143518-143616:-1:exon
so has part: feature:142679-142952:-1:exon
so has part: feature:141903-142085:-1:exon
so has part: feature:140866-141348:-1:exon
so has part: feature:140673-140781:-1:exon
so has part: feature:140424-140581:-1:exon
so has part: feature:137959-140342:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:146808-146979:-1:exon

position:146808:-1
position: 146808
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:144945-145439:-1:exon

position:144945:-1
position: 144945
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:145439:-1
position: 145439
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:143518-143616:-1:exon

position:143518:-1
position: 143518
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:143616:-1
position: 143616
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:142679-142952:-1:exon

position:142679:-1
position: 142679
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:142952:-1
position: 142952
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:141903-142085:-1:exon

position:141903:-1
position: 141903
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:142085:-1
position: 142085
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:140866-141348:-1:exon

position:140866:-1
position: 140866
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:141348:-1
position: 141348
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:140673-140781:-1:exon

position:140673:-1
position: 140673
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:140781:-1
position: 140781
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:140424-140581:-1:exon

position:140424:-1
position: 140424
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:140581:-1
position: 140581
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:137959-140342:-1:exon

position:140342:-1
position: 140342
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

CILP2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 87175
gene: CILP2
exception: unclassified translation discrepancy
note: The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: deleted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: LOW QUALITY PROTEIN: cartilage intermediate layer protein 2
translation: MPGMRRDFRADPGSPVPPVPSRCPQTRAKPPILGADLGFKGDEREFGSGGGFGSGVPPRAAAALPRAGSAPDKSGAGPGAAALAPGAALARLARLARLARVARVARVERVARLARVARVARVERVAQLARLARVERVERVAPVAPVTQLAQLARVEWLAQLARPAQLAQMAQMARPAQMVQLARLAQMARVVQMAHMARMAHVARVLVVLAVLGASYAARVAEPLENESEPGKTGTGGKPWKAAPDLEELDLGTAGKGAAWTSWFNIDHPGGDGDHESLAAIRFYYGDRVCARPVAIQARSTEWHLPEALGQVVRASPEQGFRCLHREQPAGTACANYHVRFLCPLDHVYWSHWSPWSPCSRSACGTRGTQSRSRRCGSARSPAPLRELRCRGKGTERRPCSAGPCPEPAWTDWGAWGPCSRSCGRPGTRVRRRSCRTAKNPPCPGRATEAQKCHPSPCPGNPSGAPSAVPPLPTGSEPPAGCPGHTLRGTVVTAAGLALPGARVYLEGRPPVLLARSDARGRFTASGLCPGPAANLSAHRDGFAPGLAPIVTNGSGLAEAHLRLRRLEKPYMVLQPAARVREAGQDVTFCCKASGTPAPQKYHWYHNGTLLEGTAERSSGRLALRGLAPEQAGTYHCKASSEAGAIRSAPAQLTVLAPGQQSCRAEPEPSLVELPSECPQDASGSRYYNVGRCPASPCPGGPAEPSGCGRESGLCCGVRRMELRQVPCAGSVLPLKVVAECGCGPCAQPRVLVQGRVTAADTGEPLRFGHIFLGGRKVGFTGYQGSFTIEVPPDTQRLVTRFVGDGQQRLVDAVKVLPFDPSGGAVYQEVKMLRKKEPVELDGGRSNAIPLGEAGGREPVGELVLPAGAFLRPSGEVFNGTVKASVTFVDPRDVGTASAASSDLSFANADGEIVPLRTYGMFAVDFREGESGAALQAGPVQVRMDAGQVWMAEHVQKMKLWSLNPESGLWEEEAVLRPAGGGGRRKREERTFLVGNLEIRERRLFNLDVPEDRRCFVKVRAYSNEKFNPYEQLEGVVVSLINLEPQPGFPSNPRAWGRFDSAVTGPNGACLPAFCDARRPDAYTALVTATLGGEELEAVASSPKLNPNAVGVAQPYLGKLGYRRSDHEDAALKKTAFQINVAKPDPNNVDENNGPVYSYRSLRECEEAPVSANHLRFYRVEVDRYEYNVVPFKESDVTSWTGDYLAWWPNPQEFRACYIKVQLRGPQEYMVRSRNVGGSHPRTRGQLYGLRDSRSVRDPLLDNTSGACVEFKCGGMLFDQSLADRTLVSVVPQGSCRRTAINGLLRDYLSRHPPLADNNHTGAFSMLAPLDPLGHNYGIYTVTDQNPRLAKEIAIGRCFAGTSDGFSREMRAGEGTAVTFECQERPPGRESLFQRLLSAPAEALAEIRREMGSSELRRAPPEVMDFASGPAAAPRTASSQRRPGRPRGQP
SIO_010081: CILP2
subclass of: SO_0000673
so part of: CILP2
location: complement(join(137959..140342,140424..140581,140673..140781,140866..141348,141903..142085,142679..142952,143518..143616,144945..145439,146808..146979))
location: region:137959-146979:-1
so has part: feature:146808-146979:-1:exon
so has part: feature:144945-145439:-1:exon
so has part: feature:143518-143616:-1:exon
so has part: feature:142679-142952:-1:exon
so has part: feature:141903-142085:-1:exon
so has part: feature:140866-141348:-1:exon
so has part: feature:140673-140781:-1:exon
so has part: feature:140424-140581:-1:exon
so has part: feature:137959-140342:-1:exon

XP_030822805.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:146808-146979:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:144945-145439:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:143518-143616:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:142679-142952:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:141903-142085:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:140866-141348:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:140673-140781:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:140424-140581:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:137959-140342:-1:exon

YJEFN3
type: Gene
subclass of: SO_0000704
RO_0002162: 87175
gene: YJEFN3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(147829..152477)
location: region:147829-152477:-1
so has part: feature:147829-152477:-1:exon
subclass of: SO_0000010

115914309
type: Gene
SIO_000068: ncbigene

position:147829:-1
position: 147829
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:152477:-1
position: 152477
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:147829-152477:-1:exon

YJEFN3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 87175
gene: YJEFN3
product: YjeF N-terminal domain containing 3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, 7 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_030966771.1
SIO_010081: YJEFN3
subclass of: SO_0000673
so part of: YJEFN3
location: complement(join(147829..148461,149227..149380,150251..150364,150454..150564,152298..152477))
location: region:147829-152477:-1
so has part: feature:152298-152477:-1:exon
so has part: feature:150454-150564:-1:exon
so has part: feature:150251-150364:-1:exon
so has part: feature:149227-149380:-1:exon
so has part: feature:147829-148461:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:152298-152477:-1:exon

position:152298:-1
position: 152298
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:150454-150564:-1:exon

position:150454:-1
position: 150454
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:150564:-1
position: 150564
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:150251-150364:-1:exon

position:150251:-1
position: 150251
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:150364:-1
position: 150364
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:149227-149380:-1:exon

position:149227:-1
position: 149227
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:149380:-1
position: 149380
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:147829-148461:-1:exon

position:148461:-1
position: 148461
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

YJEFN3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 87175
gene: YJEFN3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: yjeF N-terminal domain-containing protein 3
translation: MEKELLEDYRFGRQQLIEIWGHACAVAVTKAFPLRSLRRRQPTLLVACGPAQNGAVGLVCARHLRSFDYEPTIFYPKRSPDPLHRDFTTQCEKMDIPFLSYLPTEVQLIDDAYNAVVDAVLGAEGTPGTEGTEPCAAILATLRHVRIPIVSLDVPSGWVAGALGGSGDISPDVLVSLAAPKEAARRFRGRRHFLAGRFVPEELRRKFGLSPPEYPGSDCVVAL
SIO_010081: YJEFN3
subclass of: SO_0000673
so part of: YJEFN3
location: complement(join(148259..148461,149227..149380,150251..150364,150454..150564,152298..152387))
location: region:148259-152387:-1
so has part: feature:152298-152387:-1:exon
so has part: feature:150454-150564:-1:exon
so has part: feature:150251-150364:-1:exon
so has part: feature:149227-149380:-1:exon
so has part: feature:148259-148461:-1:exon

XP_030822631.1
type: Protein
SIO_000068: ncbiprotein

position:148259:-1
position: 148259
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:152387:-1
position: 152387
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:152298-152387:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:150454-150564:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:150251-150364:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:149227-149380:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:148259-148461:-1:exon

NDUFA13
type: Gene
subclass of: SO_0000704
RO_0002162: 87175
gene: NDUFA13
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(155025..157797)
location: region:155025-157797:-1
so has part: feature:155025-157797:-1:exon
subclass of: SO_0000010

115914310
type: Gene
SIO_000068: ncbigene

position:155025:-1
position: 155025
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:157797:-1
position: 157797
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:155025-157797:-1:exon

NDUFA13
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 87175
gene: NDUFA13
product: NADH:ubiquinone oxidoreductase subunit A13
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 18 ESTs, 21 Proteins, and 92% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
transcript id: XM_030966773.1
SIO_010081: NDUFA13
subclass of: SO_0000673
so part of: NDUFA13
location: complement(join(155025..155313,156000..156069,156953..157024,157475..157553,157663..157797))
location: region:155025-157797:-1
so has part: feature:157663-157797:-1:exon
so has part: feature:157475-157553:-1:exon
so has part: feature:156953-157024:-1:exon
so has part: feature:156000-156069:-1:exon
so has part: feature:155025-155313:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:157663-157797:-1:exon

position:157663:-1
position: 157663
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:157475-157553:-1:exon

position:157475:-1
position: 157475
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:157553:-1
position: 157553
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:156953-157024:-1:exon

position:156953:-1
position: 156953
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:157024:-1
position: 157024
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:156000-156069:-1:exon

position:156000:-1
position: 156000
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:156069:-1
position: 156069
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:155025-155313:-1:exon

position:155313:-1
position: 155313
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

NDUFA13
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 87175
gene: NDUFA13
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 13
translation: MAAPKVKQDMAPPGGYGPIDYKRHLPRRGLSGYSLFALGVGSLLLGYYTLVKWNRQRRRLLIEELEARIALMPLLQAESDRRTLRLLRENLEEEAKIMRDVPGWKVGESRFHTDRWVPPTLEELYYLRPPAELEREKFGLQNYV
SIO_010081: NDUFA13
subclass of: SO_0000673
so part of: NDUFA13
location: complement(join(155194..155313,156000..156069,156953..157024,157475..157553,157663..157756))
location: region:155194-157756:-1
so has part: feature:157663-157756:-1:exon
so has part: feature:157475-157553:-1:exon
so has part: feature:156953-157024:-1:exon
so has part: feature:156000-156069:-1:exon
so has part: feature:155194-155313:-1:exon

XP_030822633.1
type: Protein
SIO_000068: ncbiprotein

position:155194:-1
position: 155194
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:157756:-1
position: 157756
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:157663-157756:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:157475-157553:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:156953-157024:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:156000-156069:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:155194-155313:-1:exon

GATAD2A
type: Gene
subclass of: SO_0000704
RO_0002162: 87175
gene: GATAD2A
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(161678..182128)
location: region:161678-182128:-1
so has part: feature:161678-182128:-1:exon
subclass of: SO_0000010

115914313
type: Gene
SIO_000068: ncbigene

position:161678:-1
position: 161678
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:182128:-1
position: 182128
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:161678-182128:-1:exon

GATAD2A
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 87175
gene: GATAD2A
product: GATA zinc finger domain containing 2A
exception: unclassified transcription discrepancy
note: The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: inserted 2 bases in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 95% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_030966776.1
SIO_010081: GATAD2A
subclass of: SO_0000673
so part of: GATAD2A
location: complement(join(161678..161956,162767..162941,164022..164311,165322..165599,166331..166498,167251..167370,170091..170219,171245..171371,172547..172815,178168..178218,181910..182128))
location: region:161678-182128:-1
so has part: feature:181910-182128:-1:exon
so has part: feature:178168-178218:-1:exon
so has part: feature:172547-172815:-1:exon
so has part: feature:171245-171371:-1:exon
so has part: feature:170091-170219:-1:exon
so has part: feature:167251-167370:-1:exon
so has part: feature:166331-166498:-1:exon
so has part: feature:165322-165599:-1:exon
so has part: feature:164022-164311:-1:exon
so has part: feature:162767-162941:-1:exon
so has part: feature:161678-161956:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:181910-182128:-1:exon

position:181910:-1
position: 181910
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:178168-178218:-1:exon

position:178168:-1
position: 178168
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:178218:-1
position: 178218
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:172547-172815:-1:exon

position:172547:-1
position: 172547
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:172815:-1
position: 172815
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:171245-171371:-1:exon

position:171245:-1
position: 171245
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:171371:-1
position: 171371
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:170091-170219:-1:exon

position:170091:-1
position: 170091
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:170219:-1
position: 170219
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:167251-167370:-1:exon

position:167251:-1
position: 167251
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:167370:-1
position: 167370
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:166331-166498:-1:exon

position:166331:-1
position: 166331
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:166498:-1
position: 166498
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:165322-165599:-1:exon

position:165322:-1
position: 165322
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:165599:-1
position: 165599
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:164022-164311:-1:exon

position:164022:-1
position: 164022
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:164311:-1
position: 164311
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:162767-162941:-1:exon

position:162767:-1
position: 162767
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:162941:-1
position: 162941
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:161678-161956:-1:exon

position:161956:-1
position: 161956
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

GATAD2A
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 87175
gene: GATAD2A
exception: unclassified translation discrepancy
note: The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: inserted 2 bases in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: LOW QUALITY PROTEIN: transcriptional repressor p66-alpha
translation: MSEDSCRTRSQKRALERDSEPDSKKLRMDKGLLGSELSSPEGDMKIKADPGAGKIPGTLKSGEVKATIKVELPAAGDEPVDMSTSKGCRRERRVPSPDVIVLSDNEPSSPRVNGLARLALPEPGTEALLQSPEQRERLIKQLQEELRLEEAKLVLLKKLRQSQSQKETPAPKPSSSRVPGSGLPPPLLRGGQAAASKQSPQIVMPPLVRGAQQIHTIRQHSSTGPPPLLLAPRASVPSVQIQGQRIIQQGLIRVANVPNASLLVNIPQASPTSLKGSAVPSGQAXGRARAARALGGTGEAPGSRQAAAKLALRKQLEKTLLEIPPPKPPAPEMNFLPSAANNEFIYLVGLEEVVQNLLESQGKVAVAVSCREPYLCAQCHTDFTCRWREEKNGTIMCETCMASNQKKALKAEHTNRLKAAFVKALQQEQEIEQRILQQTAPPGQPKAEPMGQHHALKQSSSQLSRGASRGVLHTFSSSPKLQSSSGSAALGGRPGKHADRAGSKGGAAWKKNPISTGGALPFVSPALAVHKSASAVERQREYLLDMIPPRSIPQSATWK
SIO_010081: GATAD2A
subclass of: SO_0000673
so part of: GATAD2A
location: complement(join(161826..161956,162767..162941,164022..164311,165322..165599,166331..166498,167251..167370,170091..170219,171245..171371,172547..172806))
location: region:161826-172806:-1
so has part: feature:172547-172806:-1:exon
so has part: feature:171245-171371:-1:exon
so has part: feature:170091-170219:-1:exon
so has part: feature:167251-167370:-1:exon
so has part: feature:166331-166498:-1:exon
so has part: feature:165322-165599:-1:exon
so has part: feature:164022-164311:-1:exon
so has part: feature:162767-162941:-1:exon
so has part: feature:161826-161956:-1:exon

XP_030822636.1
type: Protein
SIO_000068: ncbiprotein

position:161826:-1
position: 161826
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:172806:-1
position: 172806
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:172547-172806:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:171245-171371:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:170091-170219:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:167251-167370:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:166331-166498:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:165322-165599:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:164022-164311:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:162767-162941:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:161826-161956:-1:exon

MAU2
type: Gene
subclass of: SO_0000704
RO_0002162: 87175
gene: MAU2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(189622..204429)
location: region:189622-204429:-1
so has part: feature:189622-204429:-1:exon
subclass of: SO_0000010

115914306
type: Gene
SIO_000068: ncbigene

position:189622:-1
position: 189622
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:204429:-1
position: 204429
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:189622-204429:-1:exon

MAU2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 87175
gene: MAU2
product: MAU2 sister chromatid cohesion factor
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 7 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
transcript id: XM_030966768.1
SIO_010081: MAU2
subclass of: SO_0000673
so part of: MAU2
location: complement(join(189622..190891,191519..191646,192581..192671,193460..193571,194574..194651,194870..194919,195840..195923,196151..196216,196846..196923,197772..197875,198138..198228,199371..199517,199939..200094,200578..200605,201955..202049,203082..203177,203600..203665,203878..203895,204166..204429))
location: region:189622-204429:-1
so has part: feature:204166-204429:-1:exon
so has part: feature:203878-203895:-1:exon
so has part: feature:203600-203665:-1:exon
so has part: feature:203082-203177:-1:exon
so has part: feature:201955-202049:-1:exon
so has part: feature:200578-200605:-1:exon
so has part: feature:199939-200094:-1:exon
so has part: feature:199371-199517:-1:exon
so has part: feature:198138-198228:-1:exon
so has part: feature:197772-197875:-1:exon
so has part: feature:196846-196923:-1:exon
so has part: feature:196151-196216:-1:exon
so has part: feature:195840-195923:-1:exon
so has part: feature:194870-194919:-1:exon
so has part: feature:194574-194651:-1:exon
so has part: feature:193460-193571:-1:exon
so has part: feature:192581-192671:-1:exon
so has part: feature:191519-191646:-1:exon
so has part: feature:189622-190891:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:204166-204429:-1:exon

position:204166:-1
position: 204166
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:203878-203895:-1:exon

position:203878:-1
position: 203878
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:203895:-1
position: 203895
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:203600-203665:-1:exon

position:203600:-1
position: 203600
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:203665:-1
position: 203665
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:203082-203177:-1:exon

position:203082:-1
position: 203082
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:203177:-1
position: 203177
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:201955-202049:-1:exon

position:201955:-1
position: 201955
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:202049:-1
position: 202049
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:200578-200605:-1:exon

position:200578:-1
position: 200578
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:200605:-1
position: 200605
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:199939-200094:-1:exon

position:199939:-1
position: 199939
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:200094:-1
position: 200094
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:199371-199517:-1:exon

position:199371:-1
position: 199371
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:199517:-1
position: 199517
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:198138-198228:-1:exon

position:198138:-1
position: 198138
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:198228:-1
position: 198228
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:197772-197875:-1:exon

position:197772:-1
position: 197772
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:197875:-1
position: 197875
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:196846-196923:-1:exon

position:196846:-1
position: 196846
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:196923:-1
position: 196923
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:196151-196216:-1:exon

position:196151:-1
position: 196151
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:196216:-1
position: 196216
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:195840-195923:-1:exon

position:195840:-1
position: 195840
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:195923:-1
position: 195923
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:194870-194919:-1:exon

position:194870:-1
position: 194870
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:194919:-1
position: 194919
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:194574-194651:-1:exon

position:194574:-1
position: 194574
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:194651:-1
position: 194651
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:193460-193571:-1:exon

position:193460:-1
position: 193460
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:193571:-1
position: 193571
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:192581-192671:-1:exon

position:192581:-1
position: 192581
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:192671:-1
position: 192671
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:191519-191646:-1:exon

position:191519:-1
position: 191519
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:191646:-1
position: 191646
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:189622-190891:-1:exon

position:190891:-1
position: 190891
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

MAU2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 87175
gene: MAU2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: MAU2 chromatid cohesion factor homolog
translation: MEARTHLQLGSVLYHHTRNGDQARGHLEKAWLISQQIPQFEDVKFEAASLLSELYCQENSVDTAKPLLRKAIQISQQTPYWHCRLLFQLAQLHTLEKDLVSACDLLGVGAEYARVVGSEYTRALFLLSKGMLLLMERKLQEVHPLLTLCGQIVENWQGNPIQKESLRVFFLVLQVTHYLDAGQVKSVKPCLKQLQQCIQTISTLHDDEILPSNPADLFHWLPKEHMCVLVYLVTVMHSMQAGYLEKAQKYTDKALMQLEKLKMLDCSPILSSFQVILLEHIIMCRLVTGHKATALQEISQVCQLCQQSPRLFSNHAAQLHTLLGLYCISVNCMDNAEAQFTTALRLTTHQELWAFIVTNLASVYIREGNRHQELYSLLERINPDHNFPVSSHCLRAAAFYIRGLFSFFQGRYNEAKRFLRETLKMSNAEDLNRLTACSLVLLGHIFYVLGNHRESNNMVVPAMQLASKIPDMSVQLWSSALLRDLNKACGNAMDAHEAAQMHQNFSQQLLQDHIEACSLPEHNLITWTDGPPPVQFQAQNGPTTSLASLL
SIO_010081: MAU2
subclass of: SO_0000673
so part of: MAU2
location: complement(join(190817..190891,191519..191646,192581..192671,193460..193571,194574..194651,194870..194919,195840..195923,196151..196216,196846..196923,197772..197875,198138..198228,199371..199517,199939..200094,200578..200605,201955..202049,203082..203177,203600..203665,203878..203895,204166..204255))
location: region:190817-204255:-1
so has part: feature:204166-204255:-1:exon
so has part: feature:203878-203895:-1:exon
so has part: feature:203600-203665:-1:exon
so has part: feature:203082-203177:-1:exon
so has part: feature:201955-202049:-1:exon
so has part: feature:200578-200605:-1:exon
so has part: feature:199939-200094:-1:exon
so has part: feature:199371-199517:-1:exon
so has part: feature:198138-198228:-1:exon
so has part: feature:197772-197875:-1:exon
so has part: feature:196846-196923:-1:exon
so has part: feature:196151-196216:-1:exon
so has part: feature:195840-195923:-1:exon
so has part: feature:194870-194919:-1:exon
so has part: feature:194574-194651:-1:exon
so has part: feature:193460-193571:-1:exon
so has part: feature:192581-192671:-1:exon
so has part: feature:191519-191646:-1:exon
so has part: feature:190817-190891:-1:exon

XP_030822628.1
type: Protein
SIO_000068: ncbiprotein

position:190817:-1
position: 190817
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:204255:-1
position: 204255
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:204166-204255:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:203878-203895:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:203600-203665:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:203082-203177:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:201955-202049:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:200578-200605:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:199939-200094:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:199371-199517:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:198138-198228:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:197772-197875:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:196846-196923:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:196151-196216:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:195840-195923:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:194870-194919:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:194574-194651:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:193460-193571:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:192581-192671:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:191519-191646:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:190817-190891:-1:exon

SUGP1
type: Gene
subclass of: SO_0000704
RO_0002162: 87175
gene: SUGP1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 204882..224747
location: region:204882-224747:1
so has part: feature:204882-224747:1:exon
subclass of: SO_0000010

115914416
type: Gene
SIO_000068: ncbigene

position:204882:1
position: 204882
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:224747:1
position: 224747
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:204882-224747:1:exon

SUGP1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 87175
gene: SUGP1
product: SURP and G-patch domain containing 1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, 1 Protein, and 97% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_030966946.1
SIO_010081: SUGP1
subclass of: SO_0000673
so part of: SUGP1
location: join(204882..204937,207747..207918,208584..208687,209236..209311,212492..212635,214107..214210,215326..215437,216858..217411,217678..217784,218793..218970,220268..220374,221028..221173,222262..222391,224129..224747)
location: region:204882-224747:1
so has part: feature:204882-204937:1:exon
so has part: feature:207747-207918:1:exon
so has part: feature:208584-208687:1:exon
so has part: feature:209236-209311:1:exon
so has part: feature:212492-212635:1:exon
so has part: feature:214107-214210:1:exon
so has part: feature:215326-215437:1:exon
so has part: feature:216858-217411:1:exon
so has part: feature:217678-217784:1:exon
so has part: feature:218793-218970:1:exon
so has part: feature:220268-220374:1:exon
so has part: feature:221028-221173:1:exon
so has part: feature:222262-222391:1:exon
so has part: feature:224129-224747:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:204882-204937:1:exon

position:204937:1
position: 204937
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:207747-207918:1:exon

position:207747:1
position: 207747
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:207918:1
position: 207918
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:208584-208687:1:exon

position:208584:1
position: 208584
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:208687:1
position: 208687
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:209236-209311:1:exon

position:209236:1
position: 209236
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:209311:1
position: 209311
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:212492-212635:1:exon

position:212492:1
position: 212492
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:212635:1
position: 212635
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:214107-214210:1:exon

position:214107:1
position: 214107
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:214210:1
position: 214210
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:215326-215437:1:exon

position:215326:1
position: 215326
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:215437:1
position: 215437
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:216858-217411:1:exon

position:216858:1
position: 216858
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:217411:1
position: 217411
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:217678-217784:1:exon

position:217678:1
position: 217678
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:217784:1
position: 217784
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:218793-218970:1:exon

position:218793:1
position: 218793
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:218970:1
position: 218970
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:220268-220374:1:exon

position:220268:1
position: 220268
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:220374:1
position: 220374
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:221028-221173:1:exon

position:221028:1
position: 221028
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:221173:1
position: 221173
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:222262-222391:1:exon

position:222262:1
position: 222262
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:222391:1
position: 222391
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:224129-224747:1:exon

position:224129:1
position: 224129
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

SUGP1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 87175
gene: SUGP1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: SURP and G-patch domain-containing protein 1
translation: MDNHRDAPGKASRWFGVSQSKSAKTSVNILQQEELIAQKKREIEARLEQQARQNSLSIPQLPLLGDDDGSESEASVSNKFVNDGSFLQQFLKLQREKSNAESAPNVPPTTPGMPQLQIPERDSQSSTDSLLKVLPPEDAETRQVVEKLARFVAEGGPELEKVAMEDYKDNPAFSFLHDKNSREFLYYRKKVAEIRKENQNSQAASSQKADQETRNSAEKLAQFVAAGGPEVEAIALQNNRENPAFRFLYEPHSKGHRYYRQKLEEFRRARAAPGASPFPGNSQESSLKLKSSPEASPSPLCFPPLPVPIPPPLALPVPSPVVPAALPVPSASPAPSSSSTSPPDQLAPISAPIPNSAPIPNPAVTPNPAVTPNPAAIPNLATTPNPPVAPSPAPGSTKKKRKSRWGPEEEKVELPLPQLVQQLDSPSPLSVQDLKGLGYEKGKPVGLVGVTELSEAQKKQLKEQQEMQQMYDMIMKHKRAMQEMQLLWERALQQHQHGYDSDEEVDSELGTWEHRLRRMEMDKTREWAEQLTQMGRGKHFIGDFLPPDELEKFMETFKALKEGREPDYSEYKEFKLTVENIGYQMLMKMGWKEGEGLGSDGQGIKNPVSKGTTTMDGAGFGIERPAELTKEDDEYEAFRKRMMLAYRFRPNPLNNPRRPYY
SIO_010081: SUGP1
subclass of: SO_0000673
so part of: SUGP1
location: join(204913..204937,207747..207918,208584..208687,209236..209311,212492..212635,214107..214210,215326..215437,216858..217411,217678..217784,218793..218970,220268..220374,221028..221173,222262..222391,224129..224155)
location: region:204913-224155:1
so has part: feature:204913-204937:1:exon
so has part: feature:207747-207918:1:exon
so has part: feature:208584-208687:1:exon
so has part: feature:209236-209311:1:exon
so has part: feature:212492-212635:1:exon
so has part: feature:214107-214210:1:exon
so has part: feature:215326-215437:1:exon
so has part: feature:216858-217411:1:exon
so has part: feature:217678-217784:1:exon
so has part: feature:218793-218970:1:exon
so has part: feature:220268-220374:1:exon
so has part: feature:221028-221173:1:exon
so has part: feature:222262-222391:1:exon
so has part: feature:224129-224155:1:exon

XP_030822806.1
type: Protein
SIO_000068: ncbiprotein

position:204913:1
position: 204913
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:224155:1
position: 224155
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:204913-204937:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:207747-207918:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:208584-208687:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:209236-209311:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:212492-212635:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:214107-214210:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:215326-215437:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:216858-217411:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:217678-217784:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:218793-218970:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:220268-220374:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:221028-221173:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:222262-222391:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:224129-224155:1:exon

TM6SF2
type: Gene
subclass of: SO_0000704
RO_0002162: 87175
gene: TM6SF2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 225778..231283
location: region:225778-231283:1
so has part: feature:225778-231283:1:exon
subclass of: SO_0000010

115914417
type: Gene
SIO_000068: ncbigene

position:225778:1
position: 225778
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:231283:1
position: 231283
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:225778-231283:1:exon

TM6SF2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 87175
gene: TM6SF2
product: transmembrane 6 superfamily member 2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 19 Proteins, and 14% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_030966947.1
SIO_010081: TM6SF2
subclass of: SO_0000673
so part of: TM6SF2
location: join(225778..225866,227017..227123,227539..227636,227973..228076,228526..228608,228705..228829,228927..229028,229740..229832,229920..230039,231077..231283)
location: region:225778-231283:1
so has part: feature:225778-225866:1:exon
so has part: feature:227017-227123:1:exon
so has part: feature:227539-227636:1:exon
so has part: feature:227973-228076:1:exon
so has part: feature:228526-228608:1:exon
so has part: feature:228705-228829:1:exon
so has part: feature:228927-229028:1:exon
so has part: feature:229740-229832:1:exon
so has part: feature:229920-230039:1:exon
so has part: feature:231077-231283:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:225778-225866:1:exon

position:225866:1
position: 225866
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:227017-227123:1:exon

position:227017:1
position: 227017
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:227123:1
position: 227123
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:227539-227636:1:exon

position:227539:1
position: 227539
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:227636:1
position: 227636
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:227973-228076:1:exon

position:227973:1
position: 227973
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:228076:1
position: 228076
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:228526-228608:1:exon

position:228526:1
position: 228526
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:228608:1
position: 228608
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:228705-228829:1:exon

position:228705:1
position: 228705
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:228829:1
position: 228829
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:228927-229028:1:exon

position:228927:1
position: 228927
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:229028:1
position: 229028
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:229740-229832:1:exon

position:229740:1
position: 229740
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:229832:1
position: 229832
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:229920-230039:1:exon

position:229920:1
position: 229920
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:230039:1
position: 230039
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:231077-231283:1:exon

position:231077:1
position: 231077
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

TM6SF2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 87175
gene: TM6SF2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: transmembrane 6 superfamily member 2
translation: MQLPAGPAALAAPLLALPVALGLSAVTSLDSPPALALAAVLLLLGLVSLLILTGGVGLVHDPLFCVFVAFSFVSAVDLLIALEEDGLISGFVELYVREGDPHLRTAHGLLTCYWDGTVHYGLCLAMAAAAGRRKSYRGLGLFWLGSLLMSAVVFLLGNLIGKYSAELSPSFLLNLPYLLLLTWAGLRLFQQPRALPNLSPEQIAEEQRKPLHQRPRDLLLILILILTAAFTFFRGMVVLDCPADSCFDYTYLHEPYLRDPVGYPKVQMLIYLFYLLPFLLLAIYGLAWPGCSWLPDWSLLFAGAVAQAQFAHLGSSLHSRTPFPYQTPEEVLGTFLLSNVLYALGPQLLALRCLRSPAFFVPPASPGLARAKKYQ
SIO_010081: TM6SF2
subclass of: SO_0000673
so part of: TM6SF2
location: join(225778..225866,227017..227123,227539..227636,227973..228076,228526..228608,228705..228829,228927..229028,229740..229832,229920..230039,231077..231283)
location: region:225778-231283:1
so has part: feature:225778-225866:1:exon
so has part: feature:227017-227123:1:exon
so has part: feature:227539-227636:1:exon
so has part: feature:227973-228076:1:exon
so has part: feature:228526-228608:1:exon
so has part: feature:228705-228829:1:exon
so has part: feature:228927-229028:1:exon
so has part: feature:229740-229832:1:exon
so has part: feature:229920-230039:1:exon
so has part: feature:231077-231283:1:exon

XP_030822807.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:225778-225866:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:227017-227123:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:227539-227636:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:227973-228076:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:228526-228608:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:228705-228829:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:228927-229028:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:229740-229832:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:229920-230039:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:231077-231283:1:exon

HAPLN4
type: Gene
subclass of: SO_0000704
RO_0002162: 87175
gene: HAPLN4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 231627..237013
location: region:231627-237013:1
so has part: feature:231627-237013:1:exon
subclass of: SO_0000010

115914418
type: Gene
SIO_000068: ncbigene

position:231627:1
position: 231627
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:237013:1
position: 237013
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:231627-237013:1:exon

HAPLN4
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 87175
gene: HAPLN4
product: hyaluronan and proteoglycan link protein 4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 18 Proteins
transcript id: XM_030966948.1
SIO_010081: HAPLN4
subclass of: SO_0000673
so part of: HAPLN4
location: join(231627..231734,232111..232359,233477..233594,234268..234630,235571..235873,236682..237013)
location: region:231627-237013:1
so has part: feature:231627-231734:1:exon
so has part: feature:232111-232359:1:exon
so has part: feature:233477-233594:1:exon
so has part: feature:234268-234630:1:exon
so has part: feature:235571-235873:1:exon
so has part: feature:236682-237013:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:231627-231734:1:exon

position:231734:1
position: 231734
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:232111-232359:1:exon

position:232111:1
position: 232111
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:232359:1
position: 232359
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:233477-233594:1:exon

position:233477:1
position: 233477
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:233594:1
position: 233594
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:234268-234630:1:exon

position:234268:1
position: 234268
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:234630:1
position: 234630
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:235571-235873:1:exon

position:235571:1
position: 235571
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:235873:1
position: 235873
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:236682-237013:1:exon

position:236682:1
position: 236682
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

HAPLN4
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 87175
gene: HAPLN4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: hyaluronan and proteoglycan link protein 4
translation: MLRSPKGSGDTGTLGGDIAAVPAPPVWGRRGPRSLPPGPGVPAVPGAPGRTGRAGDLGEQPVLRSAGTGAGPGRAAGVAPCAEPQRRHRRSYRRRYRGGTGGGTGSTGGPLPRAGTGHTMRPQSRWAAGPAALLLLAALVASEALPNARGRKKVVHVMEGDSGAVVVQTAPGKVVTHRGGTIILPCRYHYDVSAHDPAEIRLKWTKVTEPMDFVDVFVALGKARRAFGPYRGRTALQEDGVGDASLIIRNVTLQDYGRYECEVTNELEDDTGVVKLDLEGVIFPYHPRLGRYTLNFHEAQQACLEQDGILASHDQLHQAWLEGMDWCNAGWLQDGSVQYPISRPREQCGRKDTPVGVRNYGYRHKESEHYDAFCFTSNLNGKVYFLKTFRKLSYPEAVQACKNNGAAVAKVGQLYAAWKLQLLDRCEAGWLEDGSIRYPIVNPRARCGGREPGVRNLGFPDKKYKLFGVYCFKKAGEAPPVVAAGFPKRV
SIO_010081: HAPLN4
subclass of: SO_0000673
so part of: HAPLN4
location: join(231627..231734,232111..232359,233477..233594,234268..234630,235571..235873,236682..237013)
location: region:231627-237013:1
so has part: feature:231627-231734:1:exon
so has part: feature:232111-232359:1:exon
so has part: feature:233477-233594:1:exon
so has part: feature:234268-234630:1:exon
so has part: feature:235571-235873:1:exon
so has part: feature:236682-237013:1:exon

XP_030822808.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:231627-231734:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:232111-232359:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:233477-233594:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:234268-234630:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:235571-235873:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:236682-237013:1:exon

NCAN
type: Gene
subclass of: SO_0000704
RO_0002162: 87175
gene: NCAN
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(238187..251817)
location: region:238187-251817:-1
so has part: feature:238187-251817:-1:exon
subclass of: SO_0000010

115914352
type: Gene
SIO_000068: ncbigene

position:238187:-1
position: 238187
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:251817:-1
position: 251817
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:238187-251817:-1:exon

NCAN
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 87175
gene: NCAN
product: neurocan
exception: unclassified transcription discrepancy
note: The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: inserted 4 bases in 3 codons; deleted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, 7 Proteins, and 98% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_030966837.1
SIO_010081: NCAN
subclass of: SO_0000673
so part of: NCAN
location: complement(join(238187..238998,239090..239272,239872..240016,240098..240180,240261..240419,240587..240700,240820..240936,241131..242209,242288..243096,243347..243640,244325..244452,244695..244872,245679..246077,247310..247389,251751..251817))
location: region:238187-251817:-1
so has part: feature:251751-251817:-1:exon
so has part: feature:247310-247389:-1:exon
so has part: feature:245679-246077:-1:exon
so has part: feature:244695-244872:-1:exon
so has part: feature:244325-244452:-1:exon
so has part: feature:243347-243640:-1:exon
so has part: feature:242288-243096:-1:exon
so has part: feature:241131-242209:-1:exon
so has part: feature:240820-240936:-1:exon
so has part: feature:240587-240700:-1:exon
so has part: feature:240261-240419:-1:exon
so has part: feature:240098-240180:-1:exon
so has part: feature:239872-240016:-1:exon
so has part: feature:239090-239272:-1:exon
so has part: feature:238187-238998:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:251751-251817:-1:exon

position:251751:-1
position: 251751
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:247310-247389:-1:exon

position:247310:-1
position: 247310
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:247389:-1
position: 247389
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:245679-246077:-1:exon

position:245679:-1
position: 245679
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:246077:-1
position: 246077
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:244695-244872:-1:exon

position:244695:-1
position: 244695
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:244872:-1
position: 244872
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:244325-244452:-1:exon

position:244325:-1
position: 244325
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:244452:-1
position: 244452
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:243347-243640:-1:exon

position:243347:-1
position: 243347
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:243640:-1
position: 243640
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:242288-243096:-1:exon

position:242288:-1
position: 242288
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:243096:-1
position: 243096
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:241131-242209:-1:exon

position:241131:-1
position: 241131
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:242209:-1
position: 242209
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:240820-240936:-1:exon

position:240820:-1
position: 240820
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:240936:-1
position: 240936
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:240587-240700:-1:exon

position:240587:-1
position: 240587
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:240700:-1
position: 240700
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:240261-240419:-1:exon

position:240261:-1
position: 240261
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:240419:-1
position: 240419
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:240098-240180:-1:exon

position:240098:-1
position: 240098
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:240180:-1
position: 240180
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:239872-240016:-1:exon

position:239872:-1
position: 239872
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:240016:-1
position: 240016
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:239090-239272:-1:exon

position:239090:-1
position: 239090
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:239272:-1
position: 239272
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:238187-238998:-1:exon

position:238998:-1
position: 238998
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

NCAN
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 87175
gene: NCAN
exception: unclassified translation discrepancy
note: The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: inserted 4 bases in 3 codons; deleted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: LOW QUALITY PROTEIN: neurocan core protein
translation: MVPVMGDAACWVLLGLSLLPIAVLGSQDEGKVIHITRVQHQAVRVGLGEPVTLPCLFLLHPSASLGPNEPPEPPRVKWSKVRSASGQREDAPILVAKESAVKVVRAYEGRVSLPGYGRDRSNATLQLRAARASDAGLYRCEVVAGIEDEQDLLPLEVTGVVFHYRPAGERYALSFPAARRACRDNSAVIASPQHLQAAFEDGYDNCDAGWLSDQSVRYPITLSRPGCYGDRESLPGVRSYGRREPDELYDVYCYSRELRGTVFYATAPGRFTWQGARRHCRSRGASLATTGQLYLAWRQGLDQCDPGWLADGSVRYPIRQPRRKCGGEAPGVRTLYQFPNRTGFPPAASRFDAYCYKAAGHGDTEQPVLPVPTTPDPPGSDNVLVEHGEDPGTSGDTRDIPRERYDLLPPPGPAALGGDEDEQLRAAPRGDLPGTAXPPAPAAPGLPTGRRDIPPAAAATALVWPHEEEALNVVDAESSRRDPPSASPAHGDPAGPPAALPAHPHSPAPERRAGSSLSPPGLGTVPSAAPEPPSTAPGSSSAPRRSYPGLNGRYFQLQRHSRDPAVTAGIVTSGDPAVTAGIVTQAPVLAQEVRGAAANAVELWSPPRGGSESPHASLNALEEDISPELVAPATAPVDSGTPAGTPPVPSPSPAAPRDARGHRDIGSARGDSPRPPADGTEDFSGDSPRRQGGGSVPPLPPLPPAPLVAEGPELSPQPRGDGADGSGAPGDGALERQRKALTLLEPEGPSEGHPATPGHTEGAPPGPRGRSGPAAPHGAAEPGQEQPEESRDAGNGAAEPGSEATSSPPAWDVPSPSPSPTATEALLWASTERPEELARLEPLAEEGSAGFAPPGPQPTQRSEPGAAEQLLLSPPSPRQPPATPGPPTPAAPGEEDASGEPRREEPPTPLGSVTRGPWPSPGAPQXRGTEPAGSPSSGLLLEPSAEPELGGPGGSPLLGTDSGSGEEPARDERELLAWVGTGNASGHAPPDPCHSNPCLHGGTSRANGTVCGCSCAPGFTGENCEIDIDDCLSSPCQNGGTCIDEVNSFVCLCLPSYGGSRCEKDTEGCDHNWHKFQGHCYRYFARRRSWEDAERDCRRRAGHLTSIHSQEEHAFINGFGHENTWIGLNDRIVEQDFQWTDNTGLQYENWRENQPDNFFAGGEDCVVLVSHEIGKWNDVPCNYNLPYICKKGTVLCGPPPEVPNAFPVGKRKEKYNIHSSVRYQCHEGFTQRHVPTIKCHSSGKWDRPKILCTKRGRTQRGGTGGTGTATRTTSTTTTNRARSGENTASTSGWTGWRRATTSRAGRAQRGPQGMWWXVPRPRPTPSPPPFFSPLLALAP
SIO_010081: NCAN
subclass of: SO_0000673
so part of: NCAN
location: complement(join(238743..238998,239090..239272,239872..240016,240098..240180,240261..240419,240587..240700,240820..240936,241131..242209,242288..243096,243347..243640,244325..244452,244695..244872,245679..246077,247310..247382))
location: region:238743-247382:-1
so has part: feature:247310-247382:-1:exon
so has part: feature:245679-246077:-1:exon
so has part: feature:244695-244872:-1:exon
so has part: feature:244325-244452:-1:exon
so has part: feature:243347-243640:-1:exon
so has part: feature:242288-243096:-1:exon
so has part: feature:241131-242209:-1:exon
so has part: feature:240820-240936:-1:exon
so has part: feature:240587-240700:-1:exon
so has part: feature:240261-240419:-1:exon
so has part: feature:240098-240180:-1:exon
so has part: feature:239872-240016:-1:exon
so has part: feature:239090-239272:-1:exon
so has part: feature:238743-238998:-1:exon

XP_030822697.1
type: Protein
SIO_000068: ncbiprotein

position:238743:-1
position: 238743
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:247382:-1
position: 247382
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:247310-247382:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:245679-246077:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:244695-244872:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:244325-244452:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:243347-243640:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:242288-243096:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:241131-242209:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:240820-240936:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:240587-240700:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:240261-240419:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:240098-240180:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:239872-240016:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:239090-239272:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:238743-238998:-1:exon

NR2C2AP
type: Gene
subclass of: SO_0000704
RO_0002162: 87175
gene: NR2C2AP
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 259447..261463
location: region:259447-261463:1
so has part: feature:259447-261463:1:exon
subclass of: SO_0000010

115914300
type: Gene
SIO_000068: ncbigene

position:259447:1
position: 259447
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:261463:1
position: 261463
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:259447-261463:1:exon

NR2C2AP
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 87175
gene: NR2C2AP
product: nuclear receptor 2C2 associated protein
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 14 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
transcript id: XM_030966756.1
SIO_010081: NR2C2AP
subclass of: SO_0000673
so part of: NR2C2AP
location: join(259447..259465,259937..259983,260206..260296,260377..260482,260817..260884,261021..261463)
location: region:259447-261463:1
so has part: feature:259447-259465:1:exon
so has part: feature:259937-259983:1:exon
so has part: feature:260206-260296:1:exon
so has part: feature:260377-260482:1:exon
so has part: feature:260817-260884:1:exon
so has part: feature:261021-261463:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:259447-259465:1:exon

position:259465:1
position: 259465
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:259937-259983:1:exon

position:259937:1
position: 259937
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:259983:1
position: 259983
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:260206-260296:1:exon

position:260206:1
position: 260206
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:260296:1
position: 260296
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:260377-260482:1:exon

position:260377:1
position: 260377
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:260482:1
position: 260482
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:260817-260884:1:exon

position:260817:1
position: 260817
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:260884:1
position: 260884
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:261021-261463:1:exon

position:261021:1
position: 261021
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

NR2C2AP
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 87175
gene: NR2C2AP
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: nuclear receptor 2C2-associated protein
translation: MPVEPLVCPHTATRVSSVLNRDVKHFGKQHLFDGSEETCWNSDQGTSQWVTLDFPRPVKVSQLHIQFQGGFSSRLCTLEGCRTGEELVKISELYPQDSHAMQRFQVQETVLDKLKITFGSSTDFFGRVVVYHLGVLGERL
SIO_010081: NR2C2AP
subclass of: SO_0000673
so part of: NR2C2AP
location: join(259943..259983,260206..260296,260377..260482,260817..260884,261021..261137)
location: region:259943-261137:1
so has part: feature:259943-259983:1:exon
so has part: feature:260206-260296:1:exon
so has part: feature:260377-260482:1:exon
so has part: feature:260817-260884:1:exon
so has part: feature:261021-261137:1:exon

XP_030822616.1
type: Protein
SIO_000068: ncbiprotein

position:259943:1
position: 259943
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:261137:1
position: 261137
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:259943-259983:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:260206-260296:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:260377-260482:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:260817-260884:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:261021-261137:1:exon

RFXANK
type: Gene
subclass of: SO_0000704
RO_0002162: 87175
gene: RFXANK
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(262232..268256)
location: region:262232-268256:-1
so has part: feature:262232-268256:-1:exon
subclass of: SO_0000010

115914389
type: Gene
SIO_000068: ncbigene

position:262232:-1
position: 262232
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:268256:-1
position: 268256
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:262232-268256:-1:exon

RFXANK
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 87175
gene: RFXANK
product: regulatory factor X associated ankyrin containing protein, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, 9 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_030966896.1
SIO_010081: RFXANK
subclass of: SO_0000673
so part of: RFXANK
location: complement(join(262232..262418,262823..262903,263035..263101,263785..263910,264630..264730,264991..265056,265206..265286,266174..266251,266399..266529,268117..268256))
location: region:262232-268256:-1
so has part: feature:268117-268256:-1:exon
so has part: feature:266399-266529:-1:exon
so has part: feature:266174-266251:-1:exon
so has part: feature:265206-265286:-1:exon
so has part: feature:264991-265056:-1:exon
so has part: feature:264630-264730:-1:exon
so has part: feature:263785-263910:-1:exon
so has part: feature:263035-263101:-1:exon
so has part: feature:262823-262903:-1:exon
so has part: feature:262232-262418:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:268117-268256:-1:exon

position:268117:-1
position: 268117
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:266399-266529:-1:exon

position:266399:-1
position: 266399
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:266529:-1
position: 266529
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:266174-266251:-1:exon

position:266174:-1
position: 266174
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:266251:-1
position: 266251
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:265206-265286:-1:exon

position:265206:-1
position: 265206
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:265286:-1
position: 265286
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:264991-265056:-1:exon

position:264991:-1
position: 264991
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:265056:-1
position: 265056
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:264630-264730:-1:exon

position:264630:-1
position: 264630
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:264730:-1
position: 264730
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:263785-263910:-1:exon

position:263785:-1
position: 263785
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:263910:-1
position: 263910
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:263035-263101:-1:exon

position:263035:-1
position: 263035
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:263101:-1
position: 263101
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:262823-262903:-1:exon

position:262823:-1
position: 262823
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:262903:-1
position: 262903
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:262232-262418:-1:exon

position:262418:-1
position: 262418
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

RFXANK
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 87175
gene: RFXANK
product: regulatory factor X associated ankyrin containing protein, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, 9 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
transcript id: XM_030966895.1
SIO_010081: RFXANK
subclass of: SO_0000673
so part of: RFXANK
location: complement(join(262232..262418,262823..262903,263035..263101,263785..263910,264630..264730,264991..265056,265206..265286,266174..266251,266399..266529,267876..267953))
location: region:262232-267953:-1
so has part: feature:267876-267953:-1:exon
so has part: feature:266399-266529:-1:exon
so has part: feature:266174-266251:-1:exon
so has part: feature:265206-265286:-1:exon
so has part: feature:264991-265056:-1:exon
so has part: feature:264630-264730:-1:exon
so has part: feature:263785-263910:-1:exon
so has part: feature:263035-263101:-1:exon
so has part: feature:262823-262903:-1:exon
so has part: feature:262232-262418:-1:exon

position:267953:-1
position: 267953
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:267876-267953:-1:exon

position:267876:-1
position: 267876
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:266399-266529:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:266174-266251:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:265206-265286:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:264991-265056:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:264630-264730:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:263785-263910:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:263035-263101:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:262823-262903:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:262232-262418:-1:exon

RFXANK
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 87175
gene: RFXANK
product: regulatory factor X associated ankyrin containing protein, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, 9 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_030966897.1
SIO_010081: RFXANK
subclass of: SO_0000673
so part of: RFXANK
location: complement(join(262232..262418,262823..262903,263035..263101,263785..263910,264630..264730,264991..265056,265206..265286,266174..266251,266399..266529,267676..267696))
location: region:262232-267696:-1
so has part: feature:267676-267696:-1:exon
so has part: feature:266399-266529:-1:exon
so has part: feature:266174-266251:-1:exon
so has part: feature:265206-265286:-1:exon
so has part: feature:264991-265056:-1:exon
so has part: feature:264630-264730:-1:exon
so has part: feature:263785-263910:-1:exon
so has part: feature:263035-263101:-1:exon
so has part: feature:262823-262903:-1:exon
so has part: feature:262232-262418:-1:exon

position:267696:-1
position: 267696
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:267676-267696:-1:exon

position:267676:-1
position: 267676
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:266399-266529:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:266174-266251:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:265206-265286:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:264991-265056:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:264630-264730:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:263785-263910:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:263035-263101:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:262823-262903:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:262232-262418:-1:exon

RFXANK
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 87175
gene: RFXANK
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: DNA-binding protein RFXANK
translation: MGDSGVPSACPQQDGDGGAESARNSSAAPVDSQSPSEAPALDGFPLKHSNTLTNRQRGNEVSALPATLDTLSIHQLAAQGELIQLKEHLRKGENLVNKPDERGFTPLIWAAAFGEIETVRHLLEWGADPHALAKERESALALASMGGYTDIVTMLLDRDVDINTYDWNGGTPLLYAVRGNHVKCVEALLACGADLTEEADSGYTPMDLAVALGHKKVQQVIENHILKLFQNKKKK
SIO_010081: RFXANK
subclass of: SO_0000673
so part of: RFXANK
location: complement(join(262360..262418,262823..262903,263035..263101,263785..263910,264630..264730,264991..265056,265206..265286,266174..266251,266399..266447))
location: region:262360-266447:-1
so has part: feature:266399-266447:-1:exon
so has part: feature:266174-266251:-1:exon
so has part: feature:265206-265286:-1:exon
so has part: feature:264991-265056:-1:exon
so has part: feature:264630-264730:-1:exon
so has part: feature:263785-263910:-1:exon
so has part: feature:263035-263101:-1:exon
so has part: feature:262823-262903:-1:exon
so has part: feature:262360-262418:-1:exon

XP_030822755.1
type: Protein
SIO_000068: ncbiprotein

position:262360:-1
position: 262360
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:266447:-1
position: 266447
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:266399-266447:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:266174-266251:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:265206-265286:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:264991-265056:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:264630-264730:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:263785-263910:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:263035-263101:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:262823-262903:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:262360-262418:-1:exon

RFXANK
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 87175
gene: RFXANK
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: DNA-binding protein RFXANK
translation: MGDSGVPSACPQQDGDGGAESARNSSAAPVDSQSPSEAPALDGFPLKHSNTLTNRQRGNEVSALPATLDTLSIHQLAAQGELIQLKEHLRKGENLVNKPDERGFTPLIWAAAFGEIETVRHLLEWGADPHALAKERESALALASMGGYTDIVTMLLDRDVDINTYDWNGGTPLLYAVRGNHVKCVEALLACGADLTEEADSGYTPMDLAVALGHKKVQQVIENHILKLFQNKKKK
SIO_010081: RFXANK
subclass of: SO_0000673
so part of: RFXANK
location: complement(join(262360..262418,262823..262903,263035..263101,263785..263910,264630..264730,264991..265056,265206..265286,266174..266251,266399..266447))
location: region:262360-266447:-1
so has part: feature:266399-266447:-1:exon
so has part: feature:266174-266251:-1:exon
so has part: feature:265206-265286:-1:exon
so has part: feature:264991-265056:-1:exon
so has part: feature:264630-264730:-1:exon
so has part: feature:263785-263910:-1:exon
so has part: feature:263035-263101:-1:exon
so has part: feature:262823-262903:-1:exon
so has part: feature:262360-262418:-1:exon

XP_030822756.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:266399-266447:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:266174-266251:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:265206-265286:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:264991-265056:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:264630-264730:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:263785-263910:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:263035-263101:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:262823-262903:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:262360-262418:-1:exon

RFXANK
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 87175
gene: RFXANK
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: DNA-binding protein RFXANK
translation: MGDSGVPSACPQQDGDGGAESARNSSAAPVDSQSPSEAPALDGFPLKHSNTLTNRQRGNEVSALPATLDTLSIHQLAAQGELIQLKEHLRKGENLVNKPDERGFTPLIWAAAFGEIETVRHLLEWGADPHALAKERESALALASMGGYTDIVTMLLDRDVDINTYDWNGGTPLLYAVRGNHVKCVEALLACGADLTEEADSGYTPMDLAVALGHKKVQQVIENHILKLFQNKKKK
SIO_010081: RFXANK
subclass of: SO_0000673
so part of: RFXANK
location: complement(join(262360..262418,262823..262903,263035..263101,263785..263910,264630..264730,264991..265056,265206..265286,266174..266251,266399..266447))
location: region:262360-266447:-1
so has part: feature:266399-266447:-1:exon
so has part: feature:266174-266251:-1:exon
so has part: feature:265206-265286:-1:exon
so has part: feature:264991-265056:-1:exon
so has part: feature:264630-264730:-1:exon
so has part: feature:263785-263910:-1:exon
so has part: feature:263035-263101:-1:exon
so has part: feature:262823-262903:-1:exon
so has part: feature:262360-262418:-1:exon

XP_030822757.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:266399-266447:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:266174-266251:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:265206-265286:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:264991-265056:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:264630-264730:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:263785-263910:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:263035-263101:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:262823-262903:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:262360-262418:-1:exon

BORCS8
type: Gene
subclass of: SO_0000704
RO_0002162: 87175
gene: BORCS8
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 267928..273425
location: region:267928-273425:1
so has part: feature:267928-273425:1:exon
subclass of: SO_0000010

115914390
type: Gene
SIO_000068: ncbigene

position:267928:1
position: 267928
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:273425:1
position: 273425
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:267928-273425:1:exon

BORCS8
type: Miscellaneous RNA
subclass of: SO_0000673
RO_0002162: 87175
gene: BORCS8
product: BLOC-1 related complex subunit 8, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XR_004061423.1
SIO_010081: BORCS8
so part of: BORCS8
location: join(267928..268425,269856..269968,270701..270765,271654..271761,272799..272897,273030..273425)
location: region:267928-273425:1
so has part: feature:267928-268425:1:exon
so has part: feature:269856-269968:1:exon
so has part: feature:270701-270765:1:exon
so has part: feature:271654-271761:1:exon
so has part: feature:272799-272897:1:exon
so has part: feature:273030-273425:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:267928-268425:1:exon

position:268425:1
position: 268425
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:269856-269968:1:exon

position:269856:1
position: 269856
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:269968:1
position: 269968
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:270701-270765:1:exon

position:270701:1
position: 270701
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:270765:1
position: 270765
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:271654-271761:1:exon

position:271654:1
position: 271654
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:271761:1
position: 271761
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:272799-272897:1:exon

position:272799:1
position: 272799
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:272897:1
position: 272897
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:273030-273425:1:exon

position:273030:1
position: 273030
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

BORCS8
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 87175
gene: BORCS8
product: BLOC-1 related complex subunit 8, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
transcript id: XM_030966898.1
SIO_010081: BORCS8
subclass of: SO_0000673
so part of: BORCS8
location: join(267930..268425,269856..269968,270701..270765,271654..271761,272799..273425)
location: region:267930-273425:1
so has part: feature:267930-268425:1:exon
so has part: feature:269856-269968:1:exon
so has part: feature:270701-270765:1:exon
so has part: feature:271654-271761:1:exon
so has part: feature:272799-273425:1:exon

position:267930:1
position: 267930
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:267930-268425:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:269856-269968:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:270701-270765:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:271654-271761:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:272799-273425:1:exon

BORCS8
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 87175
gene: BORCS8
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: BLOC-1-related complex subunit 8
translation: MEEPEMQLKVKKVTDKFTESLYVLANEPSVALFRLQEHVRRSLPELAQHKSDMQSWEEQSQGAIYTVEYACSAIKNMTDSSVYFKSIDSLLKHSIAMKEQLNAAQGRSTITPQPKNPPGTS
SIO_010081: BORCS8
subclass of: SO_0000673
so part of: BORCS8
location: join(268389..268425,269856..269968,270701..270765,271654..271761,272799..272841)
location: region:268389-272841:1
so has part: feature:268389-268425:1:exon
so has part: feature:269856-269968:1:exon
so has part: feature:270701-270765:1:exon
so has part: feature:271654-271761:1:exon
so has part: feature:272799-272841:1:exon

XP_030822758.1
type: Protein
SIO_000068: ncbiprotein

position:268389:1
position: 268389
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:272841:1
position: 272841
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:268389-268425:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:269856-269968:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:270701-270765:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:271654-271761:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:272799-272841:1:exon

TMEM221
type: Gene
subclass of: SO_0000704
RO_0002162: 87175
gene: TMEM221
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(274042..279011)
location: region:274042-279011:-1
so has part: feature:274042-279011:-1:exon
subclass of: SO_0000010

115914419
type: Gene
SIO_000068: ncbigene

position:274042:-1
position: 274042
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:279011:-1
position: 279011
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:274042-279011:-1:exon

TMEM221
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 87175
gene: TMEM221
product: transmembrane protein 221
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 28% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_030966950.1
SIO_010081: TMEM221
subclass of: SO_0000673
so part of: TMEM221
location: complement(join(274042..274904,276242..276327,278728..279011))
location: region:274042-279011:-1
so has part: feature:278728-279011:-1:exon
so has part: feature:276242-276327:-1:exon
so has part: feature:274042-274904:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:278728-279011:-1:exon

position:278728:-1
position: 278728
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:276242-276327:-1:exon

position:276242:-1
position: 276242
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:276327:-1
position: 276327
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:274042-274904:-1:exon

position:274904:-1
position: 274904
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

TMEM221
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 87175
gene: TMEM221
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: transmembrane protein 221
translation: MPSAYPQRALTVLLLFGTLSAAMALLSSSLIFQLPSGRAAPGAGALPGPVAAAVLPVSAVLAALCLVLNVSCLLLCLLHGYFSTELGRGQLGPERALWFLLDGRSVRHAAIGLFCCGVCLYLTALALFMLLLFQLEAAIASACILTSGILVLLISLLHVLLRASHISQISRISQGPEPSQALYENDSAQPGHGSDLDRNAAAPPRPLREIHREFSFPPFPEGKSQPGWASSSNLSSRSKEFPRESQWELSRSKESQCQDWSRIEEFPRGSQSQDWSRNKELPRESQSHDWFRNKEFPKESQSQDWSRNKEFPRESHQELPRESQWELSRNKESQSQDWSRIKEFPRESQSQDWSRNKELPREPQSQDWSRSHRTLLDSGLLQEQGNPWNVISRDMRDVASHKATKDSTLV
SIO_010081: TMEM221
subclass of: SO_0000673
so part of: TMEM221
location: complement(join(274042..274904,276242..276327,278728..279011))
location: region:274042-279011:-1
so has part: feature:278728-279011:-1:exon
so has part: feature:276242-276327:-1:exon
so has part: feature:274042-274904:-1:exon

XP_030822810.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:278728-279011:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:276242-276327:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:274042-274904:-1:exon

MEF2B
type: Gene
subclass of: SO_0000704
RO_0002162: 87175
gene: MEF2B
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 281840..293916
location: region:281840-293916:1
so has part: feature:281840-293916:1:exon
subclass of: SO_0000010

115914420
type: Gene
SIO_000068: ncbigene

position:281840:1
position: 281840
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:293916:1
position: 293916
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:281840-293916:1:exon

MEF2B
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 87175
gene: MEF2B
product: myocyte enhancer factor 2B
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 82% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_030966951.1
SIO_010081: MEF2B
subclass of: SO_0000673
so part of: MEF2B
location: join(281840..281969,288589..288668,288833..289036,289108..289250,289635..289787,291417..291519,292442..292553,292647..292734,293559..293916)
location: region:281840-293916:1
so has part: feature:281840-281969:1:exon
so has part: feature:288589-288668:1:exon
so has part: feature:288833-289036:1:exon
so has part: feature:289108-289250:1:exon
so has part: feature:289635-289787:1:exon
so has part: feature:291417-291519:1:exon
so has part: feature:292442-292553:1:exon
so has part: feature:292647-292734:1:exon
so has part: feature:293559-293916:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:281840-281969:1:exon

position:281969:1
position: 281969
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:288589-288668:1:exon

position:288589:1
position: 288589
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:288668:1
position: 288668
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:288833-289036:1:exon

position:288833:1
position: 288833
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:289036:1
position: 289036
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:289108-289250:1:exon

position:289108:1
position: 289108
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:289250:1
position: 289250
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:289635-289787:1:exon

position:289635:1
position: 289635
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:289787:1
position: 289787
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:291417-291519:1:exon

position:291417:1
position: 291417
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:291519:1
position: 291519
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:292442-292553:1:exon

position:292442:1
position: 292442
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:292553:1
position: 292553
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:292647-292734:1:exon

position:292647:1
position: 292647
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:292734:1
position: 292734
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:293559-293916:1:exon

position:293559:1
position: 293559
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

MEF2B
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 87175
gene: MEF2B
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: myocyte-specific enhancer factor 2B
translation: MGRKKIQISRILDQRNRQVTFTKRKFGLMKKAYELSVLCDCEIALIIFNSTNRLFQYASTDMDKVLLKYTEYSEPHESRTNSDILETLKRKGLGLESHELELEEGPEPPGDRGRRLGDGVDLSLARPRFYVSRWVAVADPVSRMRGPGPCVPRPPAPAGSLSIRPCVRPSLSGPTTGVGAQACPSLSRALATKTPPPLFLGTEGRRGDSQGGRSGGTAARPLFPALQPLSPALSPGSSGLPSHGLAGFPFLSPAQADFGAGEVPAPPGFLQPPPAWQHPRDVAALGASARIVPAEEPAAVAVPGASPQPISIKSERVSPGLGCPPGTPQPPLATLAPLSEAPRAPGELQPRDDFAKSFPPYAPGPPRPLPDEPGVAVPAVPAVPTRRGQPVDVWQR
SIO_010081: MEF2B
subclass of: SO_0000673
so part of: MEF2B
location: join(288615..288668,288833..289036,289108..289250,289635..289787,291417..291519,292442..292553,292647..292734,293559..293892)
location: region:288615-293892:1
so has part: feature:288615-288668:1:exon
so has part: feature:288833-289036:1:exon
so has part: feature:289108-289250:1:exon
so has part: feature:289635-289787:1:exon
so has part: feature:291417-291519:1:exon
so has part: feature:292442-292553:1:exon
so has part: feature:292647-292734:1:exon
so has part: feature:293559-293892:1:exon

XP_030822811.1
type: Protein
SIO_000068: ncbiprotein

position:288615:1
position: 288615
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:293892:1
position: 293892
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:288615-288668:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:288833-289036:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:289108-289250:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:289635-289787:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:291417-291519:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:292442-292553:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:292647-292734:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:293559-293892:1:exon

TMEM161A
type: Gene
subclass of: SO_0000704
RO_0002162: 87175
gene: TMEM161A
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 334060..341676
location: region:334060-341676:1
so has part: feature:334060-341676:1:exon
subclass of: SO_0000010

115914269
type: Gene
SIO_000068: ncbigene

position:334060:1
position: 334060
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:341676:1
position: 341676
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:334060-341676:1:exon

TMEM161A
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 87175
gene: TMEM161A
product: transmembrane protein 161A
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, 14 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_030966701.1
SIO_010081: TMEM161A
subclass of: SO_0000673
so part of: TMEM161A
location: join(334060..334097,334632..334735,334815..334895,335386..335483,336135..336291,337113..337264,337602..337662,337806..337949,338846..338959,339756..339930,340711..340807,341381..341676)
location: region:334060-341676:1
so has part: feature:334060-334097:1:exon
so has part: feature:334632-334735:1:exon
so has part: feature:334815-334895:1:exon
so has part: feature:335386-335483:1:exon
so has part: feature:336135-336291:1:exon
so has part: feature:337113-337264:1:exon
so has part: feature:337602-337662:1:exon
so has part: feature:337806-337949:1:exon
so has part: feature:338846-338959:1:exon
so has part: feature:339756-339930:1:exon
so has part: feature:340711-340807:1:exon
so has part: feature:341381-341676:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:334060-334097:1:exon

position:334097:1
position: 334097
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:334632-334735:1:exon

position:334632:1
position: 334632
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:334735:1
position: 334735
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:334815-334895:1:exon

position:334815:1
position: 334815
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:334895:1
position: 334895
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:335386-335483:1:exon

position:335386:1
position: 335386
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:335483:1
position: 335483
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:336135-336291:1:exon

position:336135:1
position: 336135
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:336291:1
position: 336291
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:337113-337264:1:exon

position:337113:1
position: 337113
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:337264:1
position: 337264
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:337602-337662:1:exon

position:337602:1
position: 337602
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:337662:1
position: 337662
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:337806-337949:1:exon

position:337806:1
position: 337806
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:337949:1
position: 337949
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:338846-338959:1:exon

position:338846:1
position: 338846
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:338959:1
position: 338959
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:339756-339930:1:exon

position:339756:1
position: 339756
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:339930:1
position: 339930
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:340711-340807:1:exon

position:340711:1
position: 340711
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:340807:1
position: 340807
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:341381-341676:1:exon

position:341381:1
position: 341381
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

TMEM161A
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 87175
gene: TMEM161A
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: transmembrane protein 161A
translation: MAVMGVQVVVTLLAASLMQKMAPHCSFARWLLCNGSLYRYKHPSDEELCALAGKQRPKSRRDRRASGVAEDKPLSVPRDIELQLDTSPITAVDALVLRHFLEYQWFVDFSVYAGAVYAFSEGYLCLVSPARESNLGVLWCLLTVLFSVKVFCTVMRHYFRSEEGGERSVCLAAAFFFLLLAMLALVVREEYLEFGLEAGLAGVSSNLEPFLKPRGWEWTLPLARLAFKLGLVALSSFLGACLTFPGLRLAQTHLDALSMAAGKPLTQVLLHVGFVAPVLVVLLWVRPLARDFLLQAPLGKQTVQILSDASFDTLRLWAVVALSLLRLLGTRHHLQAYLALAERWVRRMRRQAGRIPARDIQRQISRIYCYVSVVSLQYLGPVILTLHCALLLKTLGHHSWGLYPAVSPAAPVAPPRPEGGAGDPGDVQVAVQEISGLLGCIFTPPLFRGLFSFLTWWVAACQVITSLFGLYFHQYLAAS
SIO_010081: TMEM161A
subclass of: SO_0000673
so part of: TMEM161A
location: join(334095..334097,334632..334735,334815..334895,335386..335483,336135..336291,337113..337264,337602..337662,337806..337949,338846..338959,339756..339930,340711..340807,341381..341634)
location: region:334095-341634:1
so has part: feature:334095-334097:1:exon
so has part: feature:334632-334735:1:exon
so has part: feature:334815-334895:1:exon
so has part: feature:335386-335483:1:exon
so has part: feature:336135-336291:1:exon
so has part: feature:337113-337264:1:exon
so has part: feature:337602-337662:1:exon
so has part: feature:337806-337949:1:exon
so has part: feature:338846-338959:1:exon
so has part: feature:339756-339930:1:exon
so has part: feature:340711-340807:1:exon
so has part: feature:341381-341634:1:exon

XP_030822561.1
type: Protein
SIO_000068: ncbiprotein

position:334095:1
position: 334095
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:341634:1
position: 341634
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:334095-334097:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:334632-334735:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:334815-334895:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:335386-335483:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:336135-336291:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:337113-337264:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:337602-337662:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:337806-337949:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:338846-338959:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:339756-339930:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:340711-340807:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:341381-341634:1:exon

SLC25A42
type: Gene
subclass of: SO_0000704
RO_0002162: 87175
gene: SLC25A42
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(347887..366492)
location: region:347887-366492:-1
so has part: feature:347887-366492:-1:exon
subclass of: SO_0000010

115914255
type: Gene
SIO_000068: ncbigene

position:347887:-1
position: 347887
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:366492:-1
position: 366492
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:347887-366492:-1:exon

SLC25A42
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 87175
gene: SLC25A42
product: solute carrier family 25 member 42
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 19 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_030966680.1
SIO_010081: SLC25A42
subclass of: SO_0000673
so part of: SLC25A42
location: complement(join(347887..350183,351124..351275,351598..351714,352971..353137,354794..354819,356535..356646,358536..358652,366445..366492))
location: region:347887-366492:-1
so has part: feature:366445-366492:-1:exon
so has part: feature:358536-358652:-1:exon
so has part: feature:356535-356646:-1:exon
so has part: feature:354794-354819:-1:exon
so has part: feature:352971-353137:-1:exon
so has part: feature:351598-351714:-1:exon
so has part: feature:351124-351275:-1:exon
so has part: feature:347887-350183:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:366445-366492:-1:exon

position:366445:-1
position: 366445
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:358536-358652:-1:exon

position:358536:-1
position: 358536
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:358652:-1
position: 358652
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:356535-356646:-1:exon

position:356535:-1
position: 356535
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:356646:-1
position: 356646
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:354794-354819:-1:exon

position:354794:-1
position: 354794
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:354819:-1
position: 354819
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:352971-353137:-1:exon

position:352971:-1
position: 352971
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:353137:-1
position: 353137
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:351598-351714:-1:exon

position:351598:-1
position: 351598
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:351714:-1
position: 351714
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:351124-351275:-1:exon

position:351124:-1
position: 351124
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:351275:-1
position: 351275
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:347887-350183:-1:exon

position:350183:-1
position: 350183
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

SLC25A42
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 87175
gene: SLC25A42
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: mitochondrial coenzyme A transporter SLC25A42
translation: MGNGVREGPVEFQRDVEPVPARIPAEDNQEKKKVLNSLMSGALAGAVAKTAVAPLDRTKIMFQVSSKRFSAKEAYRLIYRTYLNEGFWSLWRGNSATMVRVIPYAAIQFCAHEEYKQILGNYYGFQGKALTPFPRFIAGSLAGTTAAMLTYPLDMVRARMAVTPKEMYSSIVHVFIRISREEGLKTLYRGFTPTILGVIPYAGLSFFTYETLKKVHAEHSGKAQPSPPERLLFGACAGLIGQSASYPLDVVRRRMQTAGVLGHTYSSILLTMQDIVREEGLVRGLYKGLSMNWVKGPIAVGISFTTFDLTQILLRKLQHGPGLER
SIO_010081: SLC25A42
subclass of: SO_0000673
so part of: SLC25A42
location: complement(join(349858..350183,351124..351275,351598..351714,352971..353137,354794..354819,356535..356646,358536..358613))
location: region:349858-358613:-1
so has part: feature:358536-358613:-1:exon
so has part: feature:356535-356646:-1:exon
so has part: feature:354794-354819:-1:exon
so has part: feature:352971-353137:-1:exon
so has part: feature:351598-351714:-1:exon
so has part: feature:351124-351275:-1:exon
so has part: feature:349858-350183:-1:exon

XP_030822540.1
type: Protein
SIO_000068: ncbiprotein

position:349858:-1
position: 349858
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:358613:-1
position: 358613
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:358536-358613:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:356535-356646:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:354794-354819:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:352971-353137:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:351598-351714:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:351124-351275:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:349858-350183:-1:exon

ARMC6
type: Gene
subclass of: SO_0000704
RO_0002162: 87175
gene: ARMC6
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(367792..374996)
location: region:367792-374996:-1
so has part: feature:367792-374996:-1:exon
subclass of: SO_0000010

115914381
type: Gene
SIO_000068: ncbigene

position:367792:-1
position: 367792
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:374996:-1
position: 374996
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:367792-374996:-1:exon

ARMC6
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 87175
gene: ARMC6
product: armadillo repeat containing 6, transcript variant X5
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 8 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
transcript id: XM_030966877.1
SIO_010081: ARMC6
subclass of: SO_0000673
so part of: ARMC6
location: complement(join(367792..368932,369675..369812,370474..370605,371377..371522,372049..372619,373449..373531,373958..374114,374896..374996))
location: region:367792-374996:-1
so has part: feature:374896-374996:-1:exon
so has part: feature:373958-374114:-1:exon
so has part: feature:373449-373531:-1:exon
so has part: feature:372049-372619:-1:exon
so has part: feature:371377-371522:-1:exon
so has part: feature:370474-370605:-1:exon
so has part: feature:369675-369812:-1:exon
so has part: feature:367792-368932:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:374896-374996:-1:exon

position:374896:-1
position: 374896
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:373958-374114:-1:exon

position:373958:-1
position: 373958
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:374114:-1
position: 374114
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:373449-373531:-1:exon

position:373449:-1
position: 373449
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:373531:-1
position: 373531
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:372049-372619:-1:exon

position:372049:-1
position: 372049
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:372619:-1
position: 372619
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:371377-371522:-1:exon

position:371377:-1
position: 371377
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:371522:-1
position: 371522
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:370474-370605:-1:exon

position:370474:-1
position: 370474
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:370605:-1
position: 370605
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:369675-369812:-1:exon

position:369675:-1
position: 369675
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:369812:-1
position: 369812
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:367792-368932:-1:exon

position:368932:-1
position: 368932
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

ARMC6
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 87175
gene: ARMC6
product: armadillo repeat containing 6, transcript variant X6
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 8 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_030966878.1
SIO_010081: ARMC6
subclass of: SO_0000673
so part of: ARMC6
location: complement(join(367792..368932,369675..369812,370474..370605,371377..371522,372049..372619,373449..373531,373958..374111,374896..374932))
location: region:367792-374932:-1
so has part: feature:374896-374932:-1:exon
so has part: feature:373958-374111:-1:exon
so has part: feature:373449-373531:-1:exon
so has part: feature:372049-372619:-1:exon
so has part: feature:371377-371522:-1:exon
so has part: feature:370474-370605:-1:exon
so has part: feature:369675-369812:-1:exon
so has part: feature:367792-368932:-1:exon

position:374932:-1
position: 374932
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:374896-374932:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:373958-374111:-1:exon

position:374111:-1
position: 374111
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:373449-373531:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:372049-372619:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:371377-371522:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:370474-370605:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:369675-369812:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:367792-368932:-1:exon

ARMC6
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 87175
gene: ARMC6
product: armadillo repeat containing 6, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 8 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
transcript id: XM_030966872.1
SIO_010081: ARMC6
subclass of: SO_0000673
so part of: ARMC6
location: complement(join(367792..368932,369675..369812,370474..370605,371377..371522,372049..372619,373449..373531,373958..374114,374621..374753))
location: region:367792-374753:-1
so has part: feature:374621-374753:-1:exon
so has part: feature:373958-374114:-1:exon
so has part: feature:373449-373531:-1:exon
so has part: feature:372049-372619:-1:exon
so has part: feature:371377-371522:-1:exon
so has part: feature:370474-370605:-1:exon
so has part: feature:369675-369812:-1:exon
so has part: feature:367792-368932:-1:exon

position:374753:-1
position: 374753
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:374621-374753:-1:exon

position:374621:-1
position: 374621
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:373958-374114:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:373449-373531:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:372049-372619:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:371377-371522:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:370474-370605:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:369675-369812:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:367792-368932:-1:exon

ARMC6
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 87175
gene: ARMC6
product: armadillo repeat containing 6, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 8 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XM_030966873.1
SIO_010081: ARMC6
subclass of: SO_0000673
so part of: ARMC6
location: complement(join(367792..368932,369675..369812,370474..370605,371377..371522,372049..372619,373449..373531,373958..374111,374621..374721))
location: region:367792-374721:-1
so has part: feature:374621-374721:-1:exon
so has part: feature:373958-374111:-1:exon
so has part: feature:373449-373531:-1:exon
so has part: feature:372049-372619:-1:exon
so has part: feature:371377-371522:-1:exon
so has part: feature:370474-370605:-1:exon
so has part: feature:369675-369812:-1:exon
so has part: feature:367792-368932:-1:exon

position:374721:-1
position: 374721
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:374621-374721:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:373958-374111:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:373449-373531:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:372049-372619:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:371377-371522:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:370474-370605:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:369675-369812:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:367792-368932:-1:exon

ARMC6
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 87175
gene: ARMC6
product: armadillo repeat containing 6, transcript variant X7
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 8 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_030966879.1
SIO_010081: ARMC6
subclass of: SO_0000673
so part of: ARMC6
location: complement(join(367792..368932,369675..369812,370474..370605,371377..371522,372049..372619,373449..373531,373958..374111,374509..374593))
location: region:367792-374593:-1
so has part: feature:374509-374593:-1:exon
so has part: feature:373958-374111:-1:exon
so has part: feature:373449-373531:-1:exon
so has part: feature:372049-372619:-1:exon
so has part: feature:371377-371522:-1:exon
so has part: feature:370474-370605:-1:exon
so has part: feature:369675-369812:-1:exon
so has part: feature:367792-368932:-1:exon

position:374593:-1
position: 374593
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:374509-374593:-1:exon

position:374509:-1
position: 374509
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:373958-374111:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:373449-373531:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:372049-372619:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:371377-371522:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:370474-370605:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:369675-369812:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:367792-368932:-1:exon

ARMC6
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 87175
gene: ARMC6
product: armadillo repeat containing 6, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 8 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_030966874.1
SIO_010081: ARMC6
subclass of: SO_0000673
so part of: ARMC6
location: complement(join(367792..368932,369675..369812,370474..370605,371377..371522,372049..372619,373449..373531,373958..374114,374290..374459))
location: region:367792-374459:-1
so has part: feature:374290-374459:-1:exon
so has part: feature:373958-374114:-1:exon
so has part: feature:373449-373531:-1:exon
so has part: feature:372049-372619:-1:exon
so has part: feature:371377-371522:-1:exon
so has part: feature:370474-370605:-1:exon
so has part: feature:369675-369812:-1:exon
so has part: feature:367792-368932:-1:exon

position:374459:-1
position: 374459
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:374290-374459:-1:exon

position:374290:-1
position: 374290
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:373958-374114:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:373449-373531:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:372049-372619:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:371377-371522:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:370474-370605:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:369675-369812:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:367792-368932:-1:exon

ARMC6
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 87175
gene: ARMC6
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: armadillo repeat-containing protein 6 isoform X2
translation: MRRDPVRWPSGAVPPSPFVRRGRPAGAQDTEADPARPGAMGSKQIAQETFDEAVQENITEFEMEPEEAVREAVLQFESQGVDLSNIVKAVRPPASENGQRQKHQILLTLESLARAVAEQDVAQLPQQLLSLAAQCKEQLAFRCLAGRNGAYPAVLSACQLAAGDRELLLQALCTLAALLDGQPDLLDAAGRELLLRSLRERREDAEVTLAGIRCVRHACLKHEHNRQAFVKGGVLPVLTGAITQHGSAAELVRMAASALRVMTFDDDIRVPFGHAHDHAKMIVLENDGLRVLIEAAKAFTDNSGVLSELCATLSRLSVRNEFCQEIVDLGGLNFMVTLLADCMEHPDVVKQVLSAIRAVAGNDDVKDAIVDAGATELIVLAISHHLGNPQICEQGCAALCMLALRKPENCSVIMEGGGALAALQAMKAHPREVAVQKQACMLIRNLVSRSRELCGPILALGAEVLIAEARAAHRDCDDVARAALRDLGCKVELRELWTGQKGSLAQ
SIO_010081: ARMC6
subclass of: SO_0000673
so part of: ARMC6
location: complement(join(368720..368932,369675..369812,370474..370605,371377..371522,372049..372619,373449..373531,373958..374111,374621..374704))
location: region:368720-374704:-1
so has part: feature:374621-374704:-1:exon
so has part: feature:373958-374111:-1:exon
so has part: feature:373449-373531:-1:exon
so has part: feature:372049-372619:-1:exon
so has part: feature:371377-371522:-1:exon
so has part: feature:370474-370605:-1:exon
so has part: feature:369675-369812:-1:exon
so has part: feature:368720-368932:-1:exon

XP_030822733.1
type: Protein
SIO_000068: ncbiprotein

position:368720:-1
position: 368720
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:374704:-1
position: 374704
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:374621-374704:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:373958-374111:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:373449-373531:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:372049-372619:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:371377-371522:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:370474-370605:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:369675-369812:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:368720-368932:-1:exon

ARMC6
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 87175
gene: ARMC6
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: armadillo repeat-containing protein 6 isoform X1
translation: MRRDPVRWPSGAVPPSPFVRRGRPAGAQQDTEADPARPGAMGSKQIAQETFDEAVQENITEFEMEPEEAVREAVLQFESQGVDLSNIVKAVRPPASENGQRQKHQILLTLESLARAVAEQDVAQLPQQLLSLAAQCKEQLAFRCLAGRNGAYPAVLSACQLAAGDRELLLQALCTLAALLDGQPDLLDAAGRELLLRSLRERREDAEVTLAGIRCVRHACLKHEHNRQAFVKGGVLPVLTGAITQHGSAAELVRMAASALRVMTFDDDIRVPFGHAHDHAKMIVLENDGLRVLIEAAKAFTDNSGVLSELCATLSRLSVRNEFCQEIVDLGGLNFMVTLLADCMEHPDVVKQVLSAIRAVAGNDDVKDAIVDAGATELIVLAISHHLGNPQICEQGCAALCMLALRKPENCSVIMEGGGALAALQAMKAHPREVAVQKQACMLIRNLVSRSRELCGPILALGAEVLIAEARAAHRDCDDVARAALRDLGCKVELRELWTGQKGSLAQ
SIO_010081: ARMC6
subclass of: SO_0000673
so part of: ARMC6
location: complement(join(368720..368932,369675..369812,370474..370605,371377..371522,372049..372619,373449..373531,373958..374114,374621..374704))
location: region:368720-374704:-1
so has part: feature:374621-374704:-1:exon
so has part: feature:373958-374114:-1:exon
so has part: feature:373449-373531:-1:exon
so has part: feature:372049-372619:-1:exon
so has part: feature:371377-371522:-1:exon
so has part: feature:370474-370605:-1:exon
so has part: feature:369675-369812:-1:exon
so has part: feature:368720-368932:-1:exon

XP_030822732.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:374621-374704:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:373958-374114:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:373449-373531:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:372049-372619:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:371377-371522:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:370474-370605:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:369675-369812:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:368720-368932:-1:exon

ARMC6
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 87175
gene: ARMC6
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: armadillo repeat-containing protein 6 isoform X3
translation: MLPKCLLVPLPCRAFPIKYNSGRAFERQDTEADPARPGAMGSKQIAQETFDEAVQENITEFEMEPEEAVREAVLQFESQGVDLSNIVKAVRPPASENGQRQKHQILLTLESLARAVAEQDVAQLPQQLLSLAAQCKEQLAFRCLAGRNGAYPAVLSACQLAAGDRELLLQALCTLAALLDGQPDLLDAAGRELLLRSLRERREDAEVTLAGIRCVRHACLKHEHNRQAFVKGGVLPVLTGAITQHGSAAELVRMAASALRVMTFDDDIRVPFGHAHDHAKMIVLENDGLRVLIEAAKAFTDNSGVLSELCATLSRLSVRNEFCQEIVDLGGLNFMVTLLADCMEHPDVVKQVLSAIRAVAGNDDVKDAIVDAGATELIVLAISHHLGNPQICEQGCAALCMLALRKPENCSVIMEGGGALAALQAMKAHPREVAVQKQACMLIRNLVSRSRELCGPILALGAEVLIAEARAAHRDCDDVARAALRDLGCKVELRELWTGQKGSLAQ
SIO_010081: ARMC6
subclass of: SO_0000673
so part of: ARMC6
location: complement(join(368720..368932,369675..369812,370474..370605,371377..371522,372049..372619,373449..373531,373958..374114,374290..374370))
location: region:368720-374370:-1
so has part: feature:374290-374370:-1:exon
so has part: feature:373958-374114:-1:exon
so has part: feature:373449-373531:-1:exon
so has part: feature:372049-372619:-1:exon
so has part: feature:371377-371522:-1:exon
so has part: feature:370474-370605:-1:exon
so has part: feature:369675-369812:-1:exon
so has part: feature:368720-368932:-1:exon

XP_030822734.1
type: Protein
SIO_000068: ncbiprotein

position:374370:-1
position: 374370
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:374290-374370:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:373958-374114:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:373449-373531:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:372049-372619:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:371377-371522:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:370474-370605:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:369675-369812:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:368720-368932:-1:exon

ARMC6
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 87175
gene: ARMC6
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: armadillo repeat-containing protein 6 isoform X5
translation: MGSKQIAQETFDEAVQENITEFEMEPEEAVREAVLQFESQGVDLSNIVKAVRPPASENGQRQKHQILLTLESLARAVAEQDVAQLPQQLLSLAAQCKEQLAFRCLAGRNGAYPAVLSACQLAAGDRELLLQALCTLAALLDGQPDLLDAAGRELLLRSLRERREDAEVTLAGIRCVRHACLKHEHNRQAFVKGGVLPVLTGAITQHGSAAELVRMAASALRVMTFDDDIRVPFGHAHDHAKMIVLENDGLRVLIEAAKAFTDNSGVLSELCATLSRLSVRNEFCQEIVDLGGLNFMVTLLADCMEHPDVVKQVLSAIRAVAGNDDVKDAIVDAGATELIVLAISHHLGNPQICEQGCAALCMLALRKPENCSVIMEGGGALAALQAMKAHPREVAVQKQACMLIRNLVSRSRELCGPILALGAEVLIAEARAAHRDCDDVARAALRDLGCKVELRELWTGQKGSLAQ
SIO_010081: ARMC6
subclass of: SO_0000673
so part of: ARMC6
location: complement(join(368720..368932,369675..369812,370474..370605,371377..371522,372049..372619,373449..373531,373958..374078))
location: region:368720-374078:-1
so has part: feature:373958-374078:-1:exon
so has part: feature:373449-373531:-1:exon
so has part: feature:372049-372619:-1:exon
so has part: feature:371377-371522:-1:exon
so has part: feature:370474-370605:-1:exon
so has part: feature:369675-369812:-1:exon
so has part: feature:368720-368932:-1:exon

XP_030822737.1
type: Protein
SIO_000068: ncbiprotein

position:374078:-1
position: 374078
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:373958-374078:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:373449-373531:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:372049-372619:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:371377-371522:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:370474-370605:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:369675-369812:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:368720-368932:-1:exon

ARMC6
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 87175
gene: ARMC6
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: armadillo repeat-containing protein 6 isoform X5
translation: MGSKQIAQETFDEAVQENITEFEMEPEEAVREAVLQFESQGVDLSNIVKAVRPPASENGQRQKHQILLTLESLARAVAEQDVAQLPQQLLSLAAQCKEQLAFRCLAGRNGAYPAVLSACQLAAGDRELLLQALCTLAALLDGQPDLLDAAGRELLLRSLRERREDAEVTLAGIRCVRHACLKHEHNRQAFVKGGVLPVLTGAITQHGSAAELVRMAASALRVMTFDDDIRVPFGHAHDHAKMIVLENDGLRVLIEAAKAFTDNSGVLSELCATLSRLSVRNEFCQEIVDLGGLNFMVTLLADCMEHPDVVKQVLSAIRAVAGNDDVKDAIVDAGATELIVLAISHHLGNPQICEQGCAALCMLALRKPENCSVIMEGGGALAALQAMKAHPREVAVQKQACMLIRNLVSRSRELCGPILALGAEVLIAEARAAHRDCDDVARAALRDLGCKVELRELWTGQKGSLAQ
SIO_010081: ARMC6
subclass of: SO_0000673
so part of: ARMC6
location: complement(join(368720..368932,369675..369812,370474..370605,371377..371522,372049..372619,373449..373531,373958..374078))
location: region:368720-374078:-1
so has part: feature:373958-374078:-1:exon
so has part: feature:373449-373531:-1:exon
so has part: feature:372049-372619:-1:exon
so has part: feature:371377-371522:-1:exon
so has part: feature:370474-370605:-1:exon
so has part: feature:369675-369812:-1:exon
so has part: feature:368720-368932:-1:exon

XP_030822738.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:373958-374078:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:373449-373531:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:372049-372619:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:371377-371522:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:370474-370605:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:369675-369812:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:368720-368932:-1:exon

ARMC6
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 87175
gene: ARMC6
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: armadillo repeat-containing protein 6 isoform X5
translation: MGSKQIAQETFDEAVQENITEFEMEPEEAVREAVLQFESQGVDLSNIVKAVRPPASENGQRQKHQILLTLESLARAVAEQDVAQLPQQLLSLAAQCKEQLAFRCLAGRNGAYPAVLSACQLAAGDRELLLQALCTLAALLDGQPDLLDAAGRELLLRSLRERREDAEVTLAGIRCVRHACLKHEHNRQAFVKGGVLPVLTGAITQHGSAAELVRMAASALRVMTFDDDIRVPFGHAHDHAKMIVLENDGLRVLIEAAKAFTDNSGVLSELCATLSRLSVRNEFCQEIVDLGGLNFMVTLLADCMEHPDVVKQVLSAIRAVAGNDDVKDAIVDAGATELIVLAISHHLGNPQICEQGCAALCMLALRKPENCSVIMEGGGALAALQAMKAHPREVAVQKQACMLIRNLVSRSRELCGPILALGAEVLIAEARAAHRDCDDVARAALRDLGCKVELRELWTGQKGSLAQ
SIO_010081: ARMC6
subclass of: SO_0000673
so part of: ARMC6
location: complement(join(368720..368932,369675..369812,370474..370605,371377..371522,372049..372619,373449..373531,373958..374078))
location: region:368720-374078:-1
so has part: feature:373958-374078:-1:exon
so has part: feature:373449-373531:-1:exon
so has part: feature:372049-372619:-1:exon
so has part: feature:371377-371522:-1:exon
so has part: feature:370474-370605:-1:exon
so has part: feature:369675-369812:-1:exon
so has part: feature:368720-368932:-1:exon

XP_030822739.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:373958-374078:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:373449-373531:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:372049-372619:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:371377-371522:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:370474-370605:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:369675-369812:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:368720-368932:-1:exon

ARMC6
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 87175
gene: ARMC6
product: armadillo repeat containing 6, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XM_030966876.1
SIO_010081: ARMC6
subclass of: SO_0000673
so part of: ARMC6
location: complement(join(369184..369277,369675..369812,370474..370605,371377..371522,372049..372619,373449..373531,373958..374114,374621..374753))
location: region:369184-374753:-1
so has part: feature:374621-374753:-1:exon
so has part: feature:373958-374114:-1:exon
so has part: feature:373449-373531:-1:exon
so has part: feature:372049-372619:-1:exon
so has part: feature:371377-371522:-1:exon
so has part: feature:370474-370605:-1:exon
so has part: feature:369675-369812:-1:exon
so has part: feature:369184-369277:-1:exon

position:369184:-1
position: 369184
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:374621-374753:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:373958-374114:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:373449-373531:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:372049-372619:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:371377-371522:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:370474-370605:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:369675-369812:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:369184-369277:-1:exon

position:369277:-1
position: 369277
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

ARMC6
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 87175
gene: ARMC6
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: armadillo repeat-containing protein 6 isoform X4
translation: MRRDPVRWPSGAVPPSPFVRRGRPAGAQQDTEADPARPGAMGSKQIAQETFDEAVQENITEFEMEPEEAVREAVLQFESQGVDLSNIVKAVRPPASENGQRQKHQILLTLESLARAVAEQDVAQLPQQLLSLAAQCKEQLAFRCLAGRNGAYPAVLSACQLAAGDRELLLQALCTLAALLDGQPDLLDAAGRELLLRSLRERREDAEVTLAGIRCVRHACLKHEHNRQAFVKGGVLPVLTGAITQHGSAAELVRMAASALRVMTFDDDIRVPFGHAHDHAKMIVLENDGLRVLIEAAKAFTDNSGVLSELCATLSRLSVRNEFCQEIVDLGGLNFMVTLLADCMEHPDVVKQVLSAIRAVAGNDDVKDAIVDAGATELIVLAISHHLGNPQICEQGCAALCMLALRKPENCSVIMEGGGALAALQAMKAHPREVAVQKQACMLIRNLVSRSREL
SIO_010081: ARMC6
subclass of: SO_0000673
so part of: ARMC6
location: complement(join(369224..369277,369675..369812,370474..370605,371377..371522,372049..372619,373449..373531,373958..374114,374621..374704))
location: region:369224-374704:-1
so has part: feature:374621-374704:-1:exon
so has part: feature:373958-374114:-1:exon
so has part: feature:373449-373531:-1:exon
so has part: feature:372049-372619:-1:exon
so has part: feature:371377-371522:-1:exon
so has part: feature:370474-370605:-1:exon
so has part: feature:369675-369812:-1:exon
so has part: feature:369224-369277:-1:exon

XP_030822736.1
type: Protein
SIO_000068: ncbiprotein

position:369224:-1
position: 369224
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:374621-374704:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:373958-374114:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:373449-373531:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:372049-372619:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:371377-371522:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:370474-370605:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:369675-369812:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:369224-369277:-1:exon

SUGP2
type: Gene
subclass of: SO_0000704
RO_0002162: 87175
gene: SUGP2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 375221..395861
location: region:375221-395861:1
so has part: feature:375221-395861:1:exon
subclass of: SO_0000010

115914379
type: Gene
SIO_000068: ncbigene

position:375221:1
position: 375221
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:395861:1
position: 395861
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:375221-395861:1:exon

SUGP2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 87175
gene: SUGP2
product: SURP and G-patch domain containing 2, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 ESTs, 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_030966869.1
SIO_010081: SUGP2
subclass of: SO_0000673
so part of: SUGP2
location: join(375221..375495,376514..378160,379878..379995,381940..383165,384279..384390,385623..386113,388165..388229,389188..389324,391645..391765,395767..395861)
location: region:375221-395861:1
so has part: feature:375221-375495:1:exon
so has part: feature:376514-378160:1:exon
so has part: feature:379878-379995:1:exon
so has part: feature:381940-383165:1:exon
so has part: feature:384279-384390:1:exon
so has part: feature:385623-386113:1:exon
so has part: feature:388165-388229:1:exon
so has part: feature:389188-389324:1:exon
so has part: feature:391645-391765:1:exon
so has part: feature:395767-395861:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:375221-375495:1:exon

position:375495:1
position: 375495
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:376514-378160:1:exon

position:376514:1
position: 376514
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:378160:1
position: 378160
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:379878-379995:1:exon

position:379878:1
position: 379878
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:379995:1
position: 379995
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:381940-383165:1:exon

position:381940:1
position: 381940
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:383165:1
position: 383165
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:384279-384390:1:exon

position:384279:1
position: 384279
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:384390:1
position: 384390
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:385623-386113:1:exon

position:385623:1
position: 385623
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:386113:1
position: 386113
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:388165-388229:1:exon

position:388165:1
position: 388165
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:388229:1
position: 388229
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:389188-389324:1:exon

position:389188:1
position: 389188
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:389324:1
position: 389324
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:391645-391765:1:exon

position:391645:1
position: 391645
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:391765:1
position: 391765
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:395767-395861:1:exon

position:395767:1
position: 395767
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

SUGP2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 87175
gene: SUGP2
product: SURP and G-patch domain containing 2, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 ESTs, 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_030966867.1
SIO_010081: SUGP2
subclass of: SO_0000673
so part of: SUGP2
location: join(375221..375495,376514..378160,379878..379995,381940..383165,384279..384390,385623..386113,388165..388229,389188..389324,391645..391765,392600..392785)
location: region:375221-392785:1
so has part: feature:375221-375495:1:exon
so has part: feature:376514-378160:1:exon
so has part: feature:379878-379995:1:exon
so has part: feature:381940-383165:1:exon
so has part: feature:384279-384390:1:exon
so has part: feature:385623-386113:1:exon
so has part: feature:388165-388229:1:exon
so has part: feature:389188-389324:1:exon
so has part: feature:391645-391765:1:exon
so has part: feature:392600-392785:1:exon

position:392785:1
position: 392785
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:375221-375495:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:376514-378160:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:379878-379995:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:381940-383165:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:384279-384390:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:385623-386113:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:388165-388229:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:389188-389324:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:391645-391765:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:392600-392785:1:exon

position:392600:1
position: 392600
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

SUGP2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 87175
gene: SUGP2
product: SURP and G-patch domain containing 2, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 ESTs, 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XM_030966868.1
SIO_010081: SUGP2
subclass of: SO_0000673
so part of: SUGP2
location: join(375221..375495,376514..378160,379878..379995,381940..383165,384279..384390,385623..386113,388165..388229,389188..389324,391645..391811)
location: region:375221-391811:1
so has part: feature:375221-375495:1:exon
so has part: feature:376514-378160:1:exon
so has part: feature:379878-379995:1:exon
so has part: feature:381940-383165:1:exon
so has part: feature:384279-384390:1:exon
so has part: feature:385623-386113:1:exon
so has part: feature:388165-388229:1:exon
so has part: feature:389188-389324:1:exon
so has part: feature:391645-391811:1:exon

position:391811:1
position: 391811
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:375221-375495:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:376514-378160:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:379878-379995:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:381940-383165:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:384279-384390:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:385623-386113:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:388165-388229:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:389188-389324:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:391645-391811:1:exon

SUGP2
type: Miscellaneous RNA
subclass of: SO_0000673
RO_0002162: 87175
gene: SUGP2
product: SURP and G-patch domain containing 2, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 ESTs, 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XR_004061422.1
SIO_010081: SUGP2
so part of: SUGP2
location: join(375221..375495,376514..378160,379878..379995,381940..383165,384279..384390,385623..385876,385996..386113,388165..388229,389188..389265)
location: region:375221-389265:1
so has part: feature:375221-375495:1:exon
so has part: feature:376514-378160:1:exon
so has part: feature:379878-379995:1:exon
so has part: feature:381940-383165:1:exon
so has part: feature:384279-384390:1:exon
so has part: feature:385623-385876:1:exon
so has part: feature:385996-386113:1:exon
so has part: feature:388165-388229:1:exon
so has part: feature:389188-389265:1:exon

position:389265:1
position: 389265
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:375221-375495:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:376514-378160:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:379878-379995:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:381940-383165:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:384279-384390:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:385623-385876:1:exon

position:385876:1
position: 385876
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:385996-386113:1:exon

position:385996:1
position: 385996
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:388165-388229:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:389188-389265:1:exon

SUGP2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 87175
gene: SUGP2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: SURP and G-patch domain-containing protein 2
translation: MASRRITRDTFEAVVQDKVKRYRSGAAGDPGHRFPAPSRLPRPRYNESFQHDGRFPHSNCQHQDWSQEPGEDYPGENYPGEDYPGDNYPGDNYPGEDYPGENYPGENYPGENYPGPSYRAASPPPRKENYFHGRFSRPAPREREFGQDYRKFGRAAAPSREFGHHPAPHGREYGQRDREYRDYGASDCWEAGGQHGAGFGSPELLGDFRSPGLMEEEEYGSVEDQEYEAEDGEFRAPRRGGVGRARVLRGKRLARGVLKAKVFKGDLKSPLKKWSVKKAQPGLEPKALEQPLEVGAHPEQRPVPLQQHPKLPPHPAAAQRAVLRLPKPAHVFRNLNFDLVDKSDIFSTFGMEIIKWAGFHAIRNDAEFSRLFGALFELETETCAKMLASFKCSLRPEHRDYCFFTIKSLQHAALKTPKVDNEFLNMLLDKGAVKTKNCFFEIIKPFDKYIMRLQDRLLKGVTPLLMACNAYELSLKTSGLGNPRDMANAFETTVSLCRKSLALLGQTFALASVFRQEKILEAVGLQEMAPAPTAFPNFDDSTLFGREYIENLKAWLEKSGYPIQMKKAEAGSVEQLQTASPEARAPQRADRKVLDTIEQLVSSIVAGTLSAKDRNAQKNSPEYWFLSDEESLEYKYYRLRLSEVQRSSLAGDTAAPESLRAMLYARRVASIKRRLFKRKKKPGLVPARARKVRRASSGTQTLLSAGTGVNQPDRNLSAGTGVKQPEQNLSGGTGVKQPDRNLSGGTGVKQPDRNLSAGTGVKQPEQNLSGGTGVKQPDRNVPAGTGMKQPDRNLSAGTEVKHPDKNVPAGTGVKQPEQNLPAGTGMKQPDRNLTAGTRLEPPEQNVSAATGMKQPEQNLSAGTGMKHPEQNLPAGTGMKHPEQNLPAGTGMKHPEQNLPAGTGMKHPEQNLPAGTGMKHPEQNLPAGTGMKHPKQNLPAGTGMKQPNQNLPAGTGMKHPDQNLPAGTGLEQPDQNVPGAQVGLAQPGPGANCAPQGASSSCQVPVAAEGRAEAEGLAADPELLPALGSQFADVDAKTMETAEKLARFVAQVGPEIEQFSIDNSADNPELWFLQDQTSPAFKFYRMKVLELCPSITFSPEAAEAARAAGTALDTEEDEEEEEEEEEEEEEEEEEAEFEPSQADEEDEDDEEAVAAGRRVTKLEEDVVSLAGEEVSGGDVQLSSPSDGAVPTLSTQAPPGPGPGARFPRKRVSSKSLRVGLIPAPKRICLIQEPKVHEPVRIAYDRPRGCPVTKKKKKPRVLEVPQKRLSPRNVGFQMLQRMGWQEGHGLGTRGRGIREPLHLGATSAGEGLGVAGEENQEDAFDIFRQRMIQMYRQKRANK
SIO_010081: SUGP2
subclass of: SO_0000673
so part of: SUGP2
location: join(375390..375495,376514..378160,379878..379995,381940..383165,384279..384390,385623..386113,388165..388229,389188..389324,391645..391765)
location: region:375390-391765:1
so has part: feature:375390-375495:1:exon
so has part: feature:376514-378160:1:exon
so has part: feature:379878-379995:1:exon
so has part: feature:381940-383165:1:exon
so has part: feature:384279-384390:1:exon
so has part: feature:385623-386113:1:exon
so has part: feature:388165-388229:1:exon
so has part: feature:389188-389324:1:exon
so has part: feature:391645-391765:1:exon

XP_030822727.1
type: Protein
SIO_000068: ncbiprotein

position:375390:1
position: 375390
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:375390-375495:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:376514-378160:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:379878-379995:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:381940-383165:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:384279-384390:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:385623-386113:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:388165-388229:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:389188-389324:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:391645-391765:1:exon

SUGP2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 87175
gene: SUGP2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: SURP and G-patch domain-containing protein 2
translation: MASRRITRDTFEAVVQDKVKRYRSGAAGDPGHRFPAPSRLPRPRYNESFQHDGRFPHSNCQHQDWSQEPGEDYPGENYPGEDYPGDNYPGDNYPGEDYPGENYPGENYPGENYPGPSYRAASPPPRKENYFHGRFSRPAPREREFGQDYRKFGRAAAPSREFGHHPAPHGREYGQRDREYRDYGASDCWEAGGQHGAGFGSPELLGDFRSPGLMEEEEYGSVEDQEYEAEDGEFRAPRRGGVGRARVLRGKRLARGVLKAKVFKGDLKSPLKKWSVKKAQPGLEPKALEQPLEVGAHPEQRPVPLQQHPKLPPHPAAAQRAVLRLPKPAHVFRNLNFDLVDKSDIFSTFGMEIIKWAGFHAIRNDAEFSRLFGALFELETETCAKMLASFKCSLRPEHRDYCFFTIKSLQHAALKTPKVDNEFLNMLLDKGAVKTKNCFFEIIKPFDKYIMRLQDRLLKGVTPLLMACNAYELSLKTSGLGNPRDMANAFETTVSLCRKSLALLGQTFALASVFRQEKILEAVGLQEMAPAPTAFPNFDDSTLFGREYIENLKAWLEKSGYPIQMKKAEAGSVEQLQTASPEARAPQRADRKVLDTIEQLVSSIVAGTLSAKDRNAQKNSPEYWFLSDEESLEYKYYRLRLSEVQRSSLAGDTAAPESLRAMLYARRVASIKRRLFKRKKKPGLVPARARKVRRASSGTQTLLSAGTGVNQPDRNLSAGTGVKQPEQNLSGGTGVKQPDRNLSGGTGVKQPDRNLSAGTGVKQPEQNLSGGTGVKQPDRNVPAGTGMKQPDRNLSAGTEVKHPDKNVPAGTGVKQPEQNLPAGTGMKQPDRNLTAGTRLEPPEQNVSAATGMKQPEQNLSAGTGMKHPEQNLPAGTGMKHPEQNLPAGTGMKHPEQNLPAGTGMKHPEQNLPAGTGMKHPEQNLPAGTGMKHPKQNLPAGTGMKQPNQNLPAGTGMKHPDQNLPAGTGLEQPDQNVPGAQVGLAQPGPGANCAPQGASSSCQVPVAAEGRAEAEGLAADPELLPALGSQFADVDAKTMETAEKLARFVAQVGPEIEQFSIDNSADNPELWFLQDQTSPAFKFYRMKVLELCPSITFSPEAAEAARAAGTALDTEEDEEEEEEEEEEEEEEEEEAEFEPSQADEEDEDDEEAVAAGRRVTKLEEDVVSLAGEEVSGGDVQLSSPSDGAVPTLSTQAPPGPGPGARFPRKRVSSKSLRVGLIPAPKRICLIQEPKVHEPVRIAYDRPRGCPVTKKKKKPRVLEVPQKRLSPRNVGFQMLQRMGWQEGHGLGTRGRGIREPLHLGATSAGEGLGVAGEENQEDAFDIFRQRMIQMYRQKRANK
SIO_010081: SUGP2
subclass of: SO_0000673
so part of: SUGP2
location: join(375390..375495,376514..378160,379878..379995,381940..383165,384279..384390,385623..386113,388165..388229,389188..389324,391645..391765)
location: region:375390-391765:1
so has part: feature:375390-375495:1:exon
so has part: feature:376514-378160:1:exon
so has part: feature:379878-379995:1:exon
so has part: feature:381940-383165:1:exon
so has part: feature:384279-384390:1:exon
so has part: feature:385623-386113:1:exon
so has part: feature:388165-388229:1:exon
so has part: feature:389188-389324:1:exon
so has part: feature:391645-391765:1:exon

XP_030822728.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:375390-375495:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:376514-378160:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:379878-379995:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:381940-383165:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:384279-384390:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:385623-386113:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:388165-388229:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:389188-389324:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:391645-391765:1:exon

SUGP2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 87175
gene: SUGP2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: SURP and G-patch domain-containing protein 2
translation: MASRRITRDTFEAVVQDKVKRYRSGAAGDPGHRFPAPSRLPRPRYNESFQHDGRFPHSNCQHQDWSQEPGEDYPGENYPGEDYPGDNYPGDNYPGEDYPGENYPGENYPGENYPGPSYRAASPPPRKENYFHGRFSRPAPREREFGQDYRKFGRAAAPSREFGHHPAPHGREYGQRDREYRDYGASDCWEAGGQHGAGFGSPELLGDFRSPGLMEEEEYGSVEDQEYEAEDGEFRAPRRGGVGRARVLRGKRLARGVLKAKVFKGDLKSPLKKWSVKKAQPGLEPKALEQPLEVGAHPEQRPVPLQQHPKLPPHPAAAQRAVLRLPKPAHVFRNLNFDLVDKSDIFSTFGMEIIKWAGFHAIRNDAEFSRLFGALFELETETCAKMLASFKCSLRPEHRDYCFFTIKSLQHAALKTPKVDNEFLNMLLDKGAVKTKNCFFEIIKPFDKYIMRLQDRLLKGVTPLLMACNAYELSLKTSGLGNPRDMANAFETTVSLCRKSLALLGQTFALASVFRQEKILEAVGLQEMAPAPTAFPNFDDSTLFGREYIENLKAWLEKSGYPIQMKKAEAGSVEQLQTASPEARAPQRADRKVLDTIEQLVSSIVAGTLSAKDRNAQKNSPEYWFLSDEESLEYKYYRLRLSEVQRSSLAGDTAAPESLRAMLYARRVASIKRRLFKRKKKPGLVPARARKVRRASSGTQTLLSAGTGVNQPDRNLSAGTGVKQPEQNLSGGTGVKQPDRNLSGGTGVKQPDRNLSAGTGVKQPEQNLSGGTGVKQPDRNVPAGTGMKQPDRNLSAGTEVKHPDKNVPAGTGVKQPEQNLPAGTGMKQPDRNLTAGTRLEPPEQNVSAATGMKQPEQNLSAGTGMKHPEQNLPAGTGMKHPEQNLPAGTGMKHPEQNLPAGTGMKHPEQNLPAGTGMKHPEQNLPAGTGMKHPKQNLPAGTGMKQPNQNLPAGTGMKHPDQNLPAGTGLEQPDQNVPGAQVGLAQPGPGANCAPQGASSSCQVPVAAEGRAEAEGLAADPELLPALGSQFADVDAKTMETAEKLARFVAQVGPEIEQFSIDNSADNPELWFLQDQTSPAFKFYRMKVLELCPSITFSPEAAEAARAAGTALDTEEDEEEEEEEEEEEEEEEEEAEFEPSQADEEDEDDEEAVAAGRRVTKLEEDVVSLAGEEVSGGDVQLSSPSDGAVPTLSTQAPPGPGPGARFPRKRVSSKSLRVGLIPAPKRICLIQEPKVHEPVRIAYDRPRGCPVTKKKKKPRVLEVPQKRLSPRNVGFQMLQRMGWQEGHGLGTRGRGIREPLHLGATSAGEGLGVAGEENQEDAFDIFRQRMIQMYRQKRANK
SIO_010081: SUGP2
subclass of: SO_0000673
so part of: SUGP2
location: join(375390..375495,376514..378160,379878..379995,381940..383165,384279..384390,385623..386113,388165..388229,389188..389324,391645..391765)
location: region:375390-391765:1
so has part: feature:375390-375495:1:exon
so has part: feature:376514-378160:1:exon
so has part: feature:379878-379995:1:exon
so has part: feature:381940-383165:1:exon
so has part: feature:384279-384390:1:exon
so has part: feature:385623-386113:1:exon
so has part: feature:388165-388229:1:exon
so has part: feature:389188-389324:1:exon
so has part: feature:391645-391765:1:exon

XP_030822729.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:375390-375495:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:376514-378160:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:379878-379995:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:381940-383165:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:384279-384390:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:385623-386113:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:388165-388229:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:389188-389324:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:391645-391765:1:exon

HOMER3
type: Gene
subclass of: SO_0000704
RO_0002162: 87175
gene: HOMER3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 397728..418387
location: region:397728-418387:1
so has part: feature:397728-418387:1:exon
subclass of: SO_0000010

115914382
type: Gene
SIO_000068: ncbigene

position:397728:1
position: 397728
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:418387:1
position: 418387
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:397728-418387:1:exon

HOMER3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 87175
gene: HOMER3
product: homer scaffold protein 3, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 22 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
transcript id: XM_030966880.1
SIO_010081: HOMER3
subclass of: SO_0000673
so part of: HOMER3
location: join(397728..397805,405778..405916,409658..409814,410590..410721,411359..411466,411990..412111,413317..413473,415810..415920,416595..416675,417429..418387)
location: region:397728-418387:1
so has part: feature:397728-397805:1:exon
so has part: feature:405778-405916:1:exon
so has part: feature:409658-409814:1:exon
so has part: feature:410590-410721:1:exon
so has part: feature:411359-411466:1:exon
so has part: feature:411990-412111:1:exon
so has part: feature:413317-413473:1:exon
so has part: feature:415810-415920:1:exon
so has part: feature:416595-416675:1:exon
so has part: feature:417429-418387:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:397728-397805:1:exon

position:397805:1
position: 397805
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:405778-405916:1:exon

position:405778:1
position: 405778
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:405916:1
position: 405916
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:409658-409814:1:exon

position:409658:1
position: 409658
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:409814:1
position: 409814
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:410590-410721:1:exon

position:410590:1
position: 410590
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:410721:1
position: 410721
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:411359-411466:1:exon

position:411359:1
position: 411359
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:411466:1
position: 411466
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:411990-412111:1:exon

position:411990:1
position: 411990
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:412111:1
position: 412111
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:413317-413473:1:exon

position:413317:1
position: 413317
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:413473:1
position: 413473
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:415810-415920:1:exon

position:415810:1
position: 415810
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:415920:1
position: 415920
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:416595-416675:1:exon

position:416595:1
position: 416595
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:416675:1
position: 416675
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:417429-418387:1:exon

position:417429:1
position: 417429
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

HOMER3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 87175
gene: HOMER3
product: homer scaffold protein 3, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 21 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
transcript id: XM_030966883.1
SIO_010081: HOMER3
subclass of: SO_0000673
so part of: HOMER3
location: join(397729..397805,409658..409814,410590..410721,411359..411466,411990..412111,413317..413473,415810..415920,416595..416675,417429..418387)
location: region:397729-418387:1
so has part: feature:397729-397805:1:exon
so has part: feature:409658-409814:1:exon
so has part: feature:410590-410721:1:exon
so has part: feature:411359-411466:1:exon
so has part: feature:411990-412111:1:exon
so has part: feature:413317-413473:1:exon
so has part: feature:415810-415920:1:exon
so has part: feature:416595-416675:1:exon
so has part: feature:417429-418387:1:exon

position:397729:1
position: 397729
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:397729-397805:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:409658-409814:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:410590-410721:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:411359-411466:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:411990-412111:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:413317-413473:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:415810-415920:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:416595-416675:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:417429-418387:1:exon

HOMER3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 87175
gene: HOMER3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: homer protein homolog 3 isoform X2
translation: MGEQPIFSTRAHVFQIDPATKRNWIPASKHALTVSYFYDATRSVYRIISVGGTKAIINSTITPNMTFTKTSQKFGQWADSRANTVYGLGFASEQHLSQFAEKFQEVKEAARVAREKCQDKTELTNPALSIPSHQVLPSPIISSNGPGEDKLFRSQSADVEISTEKERLKKMLSEGSVSEVQWEAEFFSLQDNNSKLVAALHEANASVEQWKKELAAYQEETEALRQRVAELEAQGTPDSSSDNNKEELSQSLEELELLLKAKDEEIQLLKSQRCGRWEAEGEREETLQKLQELEARNAELEQRLQLAEQSLAESLAQRDRAHREVTRVAEIMDVKIFELSELRQGLAKLVESN
SIO_010081: HOMER3
subclass of: SO_0000673
so part of: HOMER3
location: join(397801..397805,409658..409814,410590..410721,411359..411466,411990..412111,413317..413473,415810..415920,416595..416675,417429..417617)
location: region:397801-417617:1
so has part: feature:397801-397805:1:exon
so has part: feature:409658-409814:1:exon
so has part: feature:410590-410721:1:exon
so has part: feature:411359-411466:1:exon
so has part: feature:411990-412111:1:exon
so has part: feature:413317-413473:1:exon
so has part: feature:415810-415920:1:exon
so has part: feature:416595-416675:1:exon
so has part: feature:417429-417617:1:exon

XP_030822743.1
type: Protein
SIO_000068: ncbiprotein

position:397801:1
position: 397801
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:417617:1
position: 417617
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:397801-397805:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:409658-409814:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:410590-410721:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:411359-411466:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:411990-412111:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:413317-413473:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:415810-415920:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:416595-416675:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:417429-417617:1:exon

HOMER3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 87175
gene: HOMER3
product: homer scaffold protein 3, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 22 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_030966881.1
SIO_010081: HOMER3
subclass of: SO_0000673
so part of: HOMER3
location: join(398023..398162,405778..405916,409658..409814,410590..410721,411359..411466,411990..412111,413317..413473,415810..415920,416595..416675,417429..418387)
location: region:398023-418387:1
so has part: feature:398023-398162:1:exon
so has part: feature:405778-405916:1:exon
so has part: feature:409658-409814:1:exon
so has part: feature:410590-410721:1:exon
so has part: feature:411359-411466:1:exon
so has part: feature:411990-412111:1:exon
so has part: feature:413317-413473:1:exon
so has part: feature:415810-415920:1:exon
so has part: feature:416595-416675:1:exon
so has part: feature:417429-418387:1:exon

position:398023:1
position: 398023
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:398023-398162:1:exon

position:398162:1
position: 398162
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:405778-405916:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:409658-409814:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:410590-410721:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:411359-411466:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:411990-412111:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:413317-413473:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:415810-415920:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:416595-416675:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:417429-418387:1:exon

HOMER3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 87175
gene: HOMER3
product: homer scaffold protein 3, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 22 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_030966882.1
SIO_010081: HOMER3
subclass of: SO_0000673
so part of: HOMER3
location: join(398029..398148,405778..405916,409658..409814,410590..410721,411359..411466,411990..412111,413317..413473,415810..415920,416595..416675,417429..418387)
location: region:398029-418387:1
so has part: feature:398029-398148:1:exon
so has part: feature:405778-405916:1:exon
so has part: feature:409658-409814:1:exon
so has part: feature:410590-410721:1:exon
so has part: feature:411359-411466:1:exon
so has part: feature:411990-412111:1:exon
so has part: feature:413317-413473:1:exon
so has part: feature:415810-415920:1:exon
so has part: feature:416595-416675:1:exon
so has part: feature:417429-418387:1:exon

position:398029:1
position: 398029
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:398029-398148:1:exon

position:398148:1
position: 398148
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:405778-405916:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:409658-409814:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:410590-410721:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:411359-411466:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:411990-412111:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:413317-413473:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:415810-415920:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:416595-416675:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:417429-418387:1:exon

HOMER3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 87175
gene: HOMER3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: homer protein homolog 3 isoform X1
translation: MSTTREQPIFSTRAHVFQIDPATKRNWIPASKHALTVSYFYDATRSVYRIISVGGTKAIINSTITPNMTFTKTSQKFGQWADSRANTVYGLGFASEQHLSQFAEKFQEVKEAARVAREKCQDKTELTNPALSIPSHQVLPSPIISSNGPGEDKLFRSQSADVEISTEKERLKKMLSEGSVSEVQWEAEFFSLQDNNSKLVAALHEANASVEQWKKELAAYQEETEALRQRVAELEAQGTPDSSSDNNKEELSQSLEELELLLKAKDEEIQLLKSQRCGRWEAEGEREETLQKLQELEARNAELEQRLQLAEQSLAESLAQRDRAHREVTRVAEIMDVKIFELSELRQGLAKLVESN
SIO_010081: HOMER3
subclass of: SO_0000673
so part of: HOMER3
location: join(405903..405916,409658..409814,410590..410721,411359..411466,411990..412111,413317..413473,415810..415920,416595..416675,417429..417617)
location: region:405903-417617:1
so has part: feature:405903-405916:1:exon
so has part: feature:409658-409814:1:exon
so has part: feature:410590-410721:1:exon
so has part: feature:411359-411466:1:exon
so has part: feature:411990-412111:1:exon
so has part: feature:413317-413473:1:exon
so has part: feature:415810-415920:1:exon
so has part: feature:416595-416675:1:exon
so has part: feature:417429-417617:1:exon

XP_030822740.1
type: Protein
SIO_000068: ncbiprotein

position:405903:1
position: 405903
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:405903-405916:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:409658-409814:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:410590-410721:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:411359-411466:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:411990-412111:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:413317-413473:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:415810-415920:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:416595-416675:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:417429-417617:1:exon

HOMER3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 87175
gene: HOMER3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: homer protein homolog 3 isoform X1
translation: MSTTREQPIFSTRAHVFQIDPATKRNWIPASKHALTVSYFYDATRSVYRIISVGGTKAIINSTITPNMTFTKTSQKFGQWADSRANTVYGLGFASEQHLSQFAEKFQEVKEAARVAREKCQDKTELTNPALSIPSHQVLPSPIISSNGPGEDKLFRSQSADVEISTEKERLKKMLSEGSVSEVQWEAEFFSLQDNNSKLVAALHEANASVEQWKKELAAYQEETEALRQRVAELEAQGTPDSSSDNNKEELSQSLEELELLLKAKDEEIQLLKSQRCGRWEAEGEREETLQKLQELEARNAELEQRLQLAEQSLAESLAQRDRAHREVTRVAEIMDVKIFELSELRQGLAKLVESN
SIO_010081: HOMER3
subclass of: SO_0000673
so part of: HOMER3
location: join(405903..405916,409658..409814,410590..410721,411359..411466,411990..412111,413317..413473,415810..415920,416595..416675,417429..417617)
location: region:405903-417617:1
so has part: feature:405903-405916:1:exon
so has part: feature:409658-409814:1:exon
so has part: feature:410590-410721:1:exon
so has part: feature:411359-411466:1:exon
so has part: feature:411990-412111:1:exon
so has part: feature:413317-413473:1:exon
so has part: feature:415810-415920:1:exon
so has part: feature:416595-416675:1:exon
so has part: feature:417429-417617:1:exon

XP_030822741.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:405903-405916:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:409658-409814:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:410590-410721:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:411359-411466:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:411990-412111:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:413317-413473:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:415810-415920:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:416595-416675:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:417429-417617:1:exon

HOMER3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 87175
gene: HOMER3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: homer protein homolog 3 isoform X1
translation: MSTTREQPIFSTRAHVFQIDPATKRNWIPASKHALTVSYFYDATRSVYRIISVGGTKAIINSTITPNMTFTKTSQKFGQWADSRANTVYGLGFASEQHLSQFAEKFQEVKEAARVAREKCQDKTELTNPALSIPSHQVLPSPIISSNGPGEDKLFRSQSADVEISTEKERLKKMLSEGSVSEVQWEAEFFSLQDNNSKLVAALHEANASVEQWKKELAAYQEETEALRQRVAELEAQGTPDSSSDNNKEELSQSLEELELLLKAKDEEIQLLKSQRCGRWEAEGEREETLQKLQELEARNAELEQRLQLAEQSLAESLAQRDRAHREVTRVAEIMDVKIFELSELRQGLAKLVESN
SIO_010081: HOMER3
subclass of: SO_0000673
so part of: HOMER3
location: join(405903..405916,409658..409814,410590..410721,411359..411466,411990..412111,413317..413473,415810..415920,416595..416675,417429..417617)
location: region:405903-417617:1
so has part: feature:405903-405916:1:exon
so has part: feature:409658-409814:1:exon
so has part: feature:410590-410721:1:exon
so has part: feature:411359-411466:1:exon
so has part: feature:411990-412111:1:exon
so has part: feature:413317-413473:1:exon
so has part: feature:415810-415920:1:exon
so has part: feature:416595-416675:1:exon
so has part: feature:417429-417617:1:exon

XP_030822742.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:405903-405916:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:409658-409814:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:410590-410721:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:411359-411466:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:411990-412111:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:413317-413473:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:415810-415920:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:416595-416675:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:417429-417617:1:exon

DDX49
type: Gene
subclass of: SO_0000704
RO_0002162: 87175
gene: DDX49
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(421864..434686)
location: region:421864-434686:-1
so has part: feature:421864-434686:-1:exon
subclass of: SO_0000010

115914386
type: Gene
SIO_000068: ncbigene

position:421864:-1
position: 421864
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:434686:-1
position: 434686
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:421864-434686:-1:exon

DDX49
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 87175
gene: DDX49
product: DEAD-box helicase 49
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 10 Proteins, and 95% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_030966890.1
SIO_010081: DDX49
subclass of: SO_0000673
so part of: DDX49
location: complement(join(421864..422435,424037..424108,424236..424324,425595..425669,426335..426432,427518..427594,427679..427754,428482..428622,430106..430293,431382..431556,432654..432740,433415..433538,434550..434686))
location: region:421864-434686:-1
so has part: feature:434550-434686:-1:exon
so has part: feature:433415-433538:-1:exon
so has part: feature:432654-432740:-1:exon
so has part: feature:431382-431556:-1:exon
so has part: feature:430106-430293:-1:exon
so has part: feature:428482-428622:-1:exon
so has part: feature:427679-427754:-1:exon
so has part: feature:427518-427594:-1:exon
so has part: feature:426335-426432:-1:exon
so has part: feature:425595-425669:-1:exon
so has part: feature:424236-424324:-1:exon
so has part: feature:424037-424108:-1:exon
so has part: feature:421864-422435:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:434550-434686:-1:exon

position:434550:-1
position: 434550
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:433415-433538:-1:exon

position:433415:-1
position: 433415
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:433538:-1
position: 433538
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:432654-432740:-1:exon

position:432654:-1
position: 432654
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:432740:-1
position: 432740
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:431382-431556:-1:exon

position:431382:-1
position: 431382
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:431556:-1
position: 431556
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:430106-430293:-1:exon

position:430106:-1
position: 430106
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:430293:-1
position: 430293
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:428482-428622:-1:exon

position:428482:-1
position: 428482
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:428622:-1
position: 428622
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:427679-427754:-1:exon

position:427679:-1
position: 427679
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:427754:-1
position: 427754
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:427518-427594:-1:exon

position:427518:-1
position: 427518
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:427594:-1
position: 427594
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:426335-426432:-1:exon

position:426335:-1
position: 426335
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:426432:-1
position: 426432
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:425595-425669:-1:exon

position:425595:-1
position: 425595
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:425669:-1
position: 425669
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:424236-424324:-1:exon

position:424236:-1
position: 424236
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:424324:-1
position: 424324
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:424037-424108:-1:exon

position:424037:-1
position: 424037
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:424108:-1
position: 424108
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:421864-422435:-1:exon

position:422435:-1
position: 422435
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

DDX49
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 87175
gene: DDX49
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: probable ATP-dependent RNA helicase DDX49
translation: MAEFRALGLAPWLAEQARQVGLLRPTPVQAACIPAVLQGRDCLGCAQTGSGKTAAFVLPVLHVLAQDPYGIFCLVLTPTRELAYQIAEQFRVLGKPLGLRVGWGGCVVVHGVAVPDPHLSVRLSVPDMVSQALALARRPHVVVATPGRLADHLRSSSTFSLSKVQFLVLDEADRLLEQGSADFSADLELILAAVPARRQTLLFSATLTGTLCQLRALAANSPFCWEAPAPVRTVQGLEQRYLLVPEALKDAYLVHLVQSFQDQHDDWAIIIFTKTCKDCQVLNMMLRKFSFPSVALHSMMKQKQRFAALAKFKSSIFKILIATDVAARGLDIPAVQVVINHNTPGLPKIYIHRVGRTARAGRKGMAITLVTQYDIHLVHAIEEEIKLQLPEFSVEEQLVLDILTQVNVTRRECEIELEGMDFDEKKEINKRKQMILEGKDPEQEARRKAELSRLRSRNRECRQKLQQSLHRRRQLQLRRKLHRRMERRKRKMEKEKEEQEEQ
SIO_010081: DDX49
subclass of: SO_0000673
so part of: DDX49
location: complement(join(422244..422435,424037..424108,424236..424324,425595..425669,426335..426432,427518..427594,427679..427754,428482..428622,430106..430293,431382..431556,432654..432740,433415..433538,434550..434664))
location: region:422244-434664:-1
so has part: feature:434550-434664:-1:exon
so has part: feature:433415-433538:-1:exon
so has part: feature:432654-432740:-1:exon
so has part: feature:431382-431556:-1:exon
so has part: feature:430106-430293:-1:exon
so has part: feature:428482-428622:-1:exon
so has part: feature:427679-427754:-1:exon
so has part: feature:427518-427594:-1:exon
so has part: feature:426335-426432:-1:exon
so has part: feature:425595-425669:-1:exon
so has part: feature:424236-424324:-1:exon
so has part: feature:424037-424108:-1:exon
so has part: feature:422244-422435:-1:exon

XP_030822750.1
type: Protein
SIO_000068: ncbiprotein

position:422244:-1
position: 422244
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:434664:-1
position: 434664
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:434550-434664:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:433415-433538:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:432654-432740:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:431382-431556:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:430106-430293:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:428482-428622:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:427679-427754:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:427518-427594:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:426335-426432:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:425595-425669:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:424236-424324:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:424037-424108:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:422244-422435:-1:exon

COPE
type: Gene
subclass of: SO_0000704
RO_0002162: 87175
gene: COPE
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 435017..444876
location: region:435017-444876:1
so has part: feature:435017-444876:1:exon
subclass of: SO_0000010

115914385
type: Gene
SIO_000068: ncbigene

position:435017:1
position: 435017
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:444876:1
position: 444876
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:435017-444876:1:exon

COPE
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 87175
gene: COPE
product: coatomer protein complex subunit epsilon, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 7 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_030966889.1
SIO_010081: COPE
subclass of: SO_0000673
so part of: COPE
location: join(435017..435172,435327..435389,436572..436678,437449..437601,437934..437987,438517..438598,440827..440982,441957..442025,443921..443995,444461..444545,444858..444876)
location: region:435017-444876:1
so has part: feature:435017-435172:1:exon
so has part: feature:435327-435389:1:exon
so has part: feature:436572-436678:1:exon
so has part: feature:437449-437601:1:exon
so has part: feature:437934-437987:1:exon
so has part: feature:438517-438598:1:exon
so has part: feature:440827-440982:1:exon
so has part: feature:441957-442025:1:exon
so has part: feature:443921-443995:1:exon
so has part: feature:444461-444545:1:exon
so has part: feature:444858-444876:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:435017-435172:1:exon

position:435172:1
position: 435172
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:435327-435389:1:exon

position:435327:1
position: 435327
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:435389:1
position: 435389
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:436572-436678:1:exon

position:436572:1
position: 436572
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:436678:1
position: 436678
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:437449-437601:1:exon

position:437449:1
position: 437449
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:437601:1
position: 437601
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:437934-437987:1:exon

position:437934:1
position: 437934
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:437987:1
position: 437987
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:438517-438598:1:exon

position:438517:1
position: 438517
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:438598:1
position: 438598
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:440827-440982:1:exon

position:440827:1
position: 440827
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:440982:1
position: 440982
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:441957-442025:1:exon

position:441957:1
position: 441957
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:442025:1
position: 442025
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:443921-443995:1:exon

position:443921:1
position: 443921
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:443995:1
position: 443995
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:444461-444545:1:exon

position:444461:1
position: 444461
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:444545:1
position: 444545
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:444858-444876:1:exon

position:444858:1
position: 444858
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

COPE
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 87175
gene: COPE
product: coatomer protein complex subunit epsilon, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 7 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
transcript id: XM_030966888.1
SIO_010081: COPE
subclass of: SO_0000673
so part of: COPE
location: join(435017..435172,435327..435389,436572..436678,437449..437601,437934..437987,438517..438598,440827..440982,441957..442025,443921..443995,444461..444806)
location: region:435017-444806:1
so has part: feature:435017-435172:1:exon
so has part: feature:435327-435389:1:exon
so has part: feature:436572-436678:1:exon
so has part: feature:437449-437601:1:exon
so has part: feature:437934-437987:1:exon
so has part: feature:438517-438598:1:exon
so has part: feature:440827-440982:1:exon
so has part: feature:441957-442025:1:exon
so has part: feature:443921-443995:1:exon
so has part: feature:444461-444806:1:exon

position:444806:1
position: 444806
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:435017-435172:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:435327-435389:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:436572-436678:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:437449-437601:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:437934-437987:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:438517-438598:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:440827-440982:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:441957-442025:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:443921-443995:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:444461-444806:1:exon

COPE
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 87175
gene: COPE
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: coatomer subunit epsilon
translation: MAAGTGAAPAGEADELFDLRNNFYIGAFQAAINEAQRVKPSSPQQETERDVFLFRAYIAQRKLAVVLDELQGSPSPALQSVRLLAHFLASDSQSHRDSIVAELDKKMAKSVDVANSTFLLMAASIYCHQQDPDAALRALHQGDSLECLAMMIQILLKLDRLDLARKELKKMQEQDEDATLTQLATAWVNLALGGEKLQDAFYTFQELADRYSPSLLLLNGQAAAAMAQGRWDEAEGLLQEALDKDSGHPETLLNLVVLSQHLGKAPEVTNRYLSQLKDAHKNHPFIQEYQAKENDFDRLALQYAPSA
SIO_010081: COPE
subclass of: SO_0000673
so part of: COPE
location: join(435056..435172,435327..435389,436572..436678,437449..437601,437934..437987,438517..438598,440827..440982,441957..442025,443921..443995,444461..444508)
location: region:435056-444508:1
so has part: feature:435056-435172:1:exon
so has part: feature:435327-435389:1:exon
so has part: feature:436572-436678:1:exon
so has part: feature:437449-437601:1:exon
so has part: feature:437934-437987:1:exon
so has part: feature:438517-438598:1:exon
so has part: feature:440827-440982:1:exon
so has part: feature:441957-442025:1:exon
so has part: feature:443921-443995:1:exon
so has part: feature:444461-444508:1:exon

XP_030822748.1
type: Protein
SIO_000068: ncbiprotein

position:435056:1
position: 435056
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:444508:1
position: 444508
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:435056-435172:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:435327-435389:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:436572-436678:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:437449-437601:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:437934-437987:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:438517-438598:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:440827-440982:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:441957-442025:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:443921-443995:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:444461-444508:1:exon

COPE
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 87175
gene: COPE
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: coatomer subunit epsilon
translation: MAAGTGAAPAGEADELFDLRNNFYIGAFQAAINEAQRVKPSSPQQETERDVFLFRAYIAQRKLAVVLDELQGSPSPALQSVRLLAHFLASDSQSHRDSIVAELDKKMAKSVDVANSTFLLMAASIYCHQQDPDAALRALHQGDSLECLAMMIQILLKLDRLDLARKELKKMQEQDEDATLTQLATAWVNLALGGEKLQDAFYTFQELADRYSPSLLLLNGQAAAAMAQGRWDEAEGLLQEALDKDSGHPETLLNLVVLSQHLGKAPEVTNRYLSQLKDAHKNHPFIQEYQAKENDFDRLALQYAPSA
SIO_010081: COPE
subclass of: SO_0000673
so part of: COPE
location: join(435056..435172,435327..435389,436572..436678,437449..437601,437934..437987,438517..438598,440827..440982,441957..442025,443921..443995,444461..444508)
location: region:435056-444508:1
so has part: feature:435056-435172:1:exon
so has part: feature:435327-435389:1:exon
so has part: feature:436572-436678:1:exon
so has part: feature:437449-437601:1:exon
so has part: feature:437934-437987:1:exon
so has part: feature:438517-438598:1:exon
so has part: feature:440827-440982:1:exon
so has part: feature:441957-442025:1:exon
so has part: feature:443921-443995:1:exon
so has part: feature:444461-444508:1:exon

XP_030822749.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:435056-435172:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:435327-435389:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:436572-436678:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:437449-437601:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:437934-437987:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:438517-438598:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:440827-440982:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:441957-442025:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:443921-443995:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:444461-444508:1:exon

CERS1
type: Gene
subclass of: SO_0000704
RO_0002162: 87175
gene: CERS1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 449596..465571
location: region:449596-465571:1
so has part: feature:449596-465571:1:exon
subclass of: SO_0000010

115914384
type: Gene
SIO_000068: ncbigene

position:449596:1
position: 449596
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:465571:1
position: 465571
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:449596-465571:1:exon

CERS1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 87175
gene: CERS1
product: ceramide synthase 1, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_030966886.1
SIO_010081: CERS1
subclass of: SO_0000673
so part of: CERS1
location: join(449596..449832,458752..458911,460384..460564,461460..461621,463567..463714,464417..464553,465130..465571)
location: region:449596-465571:1
so has part: feature:449596-449832:1:exon
so has part: feature:458752-458911:1:exon
so has part: feature:460384-460564:1:exon
so has part: feature:461460-461621:1:exon
so has part: feature:463567-463714:1:exon
so has part: feature:464417-464553:1:exon
so has part: feature:465130-465571:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:449596-449832:1:exon

position:449832:1
position: 449832
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:458752-458911:1:exon

position:458752:1
position: 458752
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:458911:1
position: 458911
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:460384-460564:1:exon

position:460384:1
position: 460384
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:460564:1
position: 460564
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:461460-461621:1:exon

position:461460:1
position: 461460
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:461621:1
position: 461621
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:463567-463714:1:exon

position:463567:1
position: 463567
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:463714:1
position: 463714
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:464417-464553:1:exon

position:464417:1
position: 464417
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:464553:1
position: 464553
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:465130-465571:1:exon

position:465130:1
position: 465130
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

CERS1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 87175
gene: CERS1
product: ceramide synthase 1, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_030966887.1
SIO_010081: CERS1
subclass of: SO_0000673
so part of: CERS1
location: join(449596..449832,458752..458911,460384..460564,461460..461621,463567..463714,464441..464553,465130..465571)
location: region:449596-465571:1
so has part: feature:449596-449832:1:exon
so has part: feature:458752-458911:1:exon
so has part: feature:460384-460564:1:exon
so has part: feature:461460-461621:1:exon
so has part: feature:463567-463714:1:exon
so has part: feature:464441-464553:1:exon
so has part: feature:465130-465571:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:449596-449832:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:458752-458911:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:460384-460564:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:461460-461621:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:463567-463714:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:464441-464553:1:exon

position:464441:1
position: 464441
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:465130-465571:1:exon

CERS1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 87175
gene: CERS1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: ceramide synthase 1 isoform X1
translation: MPPPEPMPGYGELLRRGYGSLAAAARGCGDCGWELALRTWAENAHLGWAEVLLCGICALGWTALRRACSRRLFRPLGEWCQLQPKDAAKMPESAWKLFFYSVSWSYGAYLLFGTDYPFFHDPPSVFYGWQRGMEVPGDIALAYLLQGSFYGHSLYATAYMDTWRKDSLVMLLHHVVTLTLLASSYAFRYHNVGVLVLFLHDVNDVQLEFTKLNVYFKHRGGAFHRLNDLLANAGCLAFSVSWFWFRLYWFPLKVLYATCHSSLQSVPNIPFYFFFNALLLVLTLMNIYWFLYIVLFVAKVLLGQMQEVNDVREYDLEESRKPGKEPGIQLPRALKEGLHLKNGLVKDKRL
SIO_010081: CERS1
subclass of: SO_0000673
so part of: CERS1
location: join(449611..449832,458752..458911,460384..460564,461460..461621,463567..463714,464417..464553,465130..465172)
location: region:449611-465172:1
so has part: feature:449611-449832:1:exon
so has part: feature:458752-458911:1:exon
so has part: feature:460384-460564:1:exon
so has part: feature:461460-461621:1:exon
so has part: feature:463567-463714:1:exon
so has part: feature:464417-464553:1:exon
so has part: feature:465130-465172:1:exon

XP_030822746.1
type: Protein
SIO_000068: ncbiprotein

position:449611:1
position: 449611
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:465172:1
position: 465172
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:449611-449832:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:458752-458911:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:460384-460564:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:461460-461621:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:463567-463714:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:464417-464553:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:465130-465172:1:exon

CERS1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 87175
gene: CERS1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: ceramide synthase 1 isoform X2
translation: MPPPEPMPGYGELLRRGYGSLAAAARGCGDCGWELALRTWAENAHLGWAEVLLCGICALGWTALRRACSRRLFRPLGEWCQLQPKDAAKMPESAWKLFFYSVSWSYGAYLLFGTDYPFFHDPPSVFYGWQRGMEVPGDIALAYLLQGSFYGHSLYATAYMDTWRKDSLVMLLHHVVTLTLLASSYAFRYHNVGVLVLFLHDVNDVQLEFTKLNVYFKHRGGAFHRLNDLLANAGCLAFSVSWFWFRLYWFPLKVLYATCHSSLQSVPNIPFYFFFNALLLVLTLMNIYWFLVLLGQMQEVNDVREYDLEESRKPGKEPGIQLPRALKEGLHLKNGLVKDKRL
SIO_010081: CERS1
subclass of: SO_0000673
so part of: CERS1
location: join(449611..449832,458752..458911,460384..460564,461460..461621,463567..463714,464441..464553,465130..465172)
location: region:449611-465172:1
so has part: feature:449611-449832:1:exon
so has part: feature:458752-458911:1:exon
so has part: feature:460384-460564:1:exon
so has part: feature:461460-461621:1:exon
so has part: feature:463567-463714:1:exon
so has part: feature:464441-464553:1:exon
so has part: feature:465130-465172:1:exon

XP_030822747.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:449611-449832:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:458752-458911:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:460384-460564:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:461460-461621:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:463567-463714:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:464441-464553:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:465130-465172:1:exon

GDF1
type: Gene
subclass of: SO_0000704
RO_0002162: 87175
gene: GDF1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 466281..470636
location: region:466281-470636:1
so has part: feature:466281-470636:1:exon
subclass of: SO_0000010

115914383
type: Gene
SIO_000068: ncbigene

position:466281:1
position: 466281
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:470636:1
position: 470636
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:466281-470636:1:exon

GDF1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 87175
gene: GDF1
product: growth differentiation factor 1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 ESTs, 12 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_030966884.1
SIO_010081: GDF1
subclass of: SO_0000673
so part of: GDF1
location: join(466281..467182,468059..470636)
location: region:466281-470636:1
so has part: feature:466281-467182:1:exon
so has part: feature:468059-470636:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:466281-467182:1:exon

position:467182:1
position: 467182
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:468059-470636:1:exon

position:468059:1
position: 468059
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

GDF1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 87175
gene: GDF1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: embryonic growth/differentiation factor 1
translation: MWMWLLRGLAWALLSPALAPEPGPQENSLLRSLGLSAKPSPKSPAPVPPVLWRIFHKRRTLPRPEAELEPCRVEELNVPGSIVRVFADQGRFLPAGPPQGRLCLRKLLLFNLSALEEGERPTMAQLELRFQHNSYHGPSPGQVLELRLHRASRRGSPQPGRAPLLERSLVQLRKSLLFDLSAALRAGAVPGRDYLALVLEMSVSGGPGSPRSPCGGSDAFAAASLLLVTLGRQCRAGRGRRSAPSPAASASPLCKPRRLYISFSDVGWENWIIAPQGYLANYCGGECPFPLAAELNSTNHAVLQTMVHSLDPQGTPQPCCVPVRLSPISILYYDNSDNVVLRHYEDMVVDECGCR
SIO_010081: GDF1
subclass of: SO_0000673
so part of: GDF1
location: join(466915..467182,468059..468858)
location: region:466915-468858:1
so has part: feature:466915-467182:1:exon
so has part: feature:468059-468858:1:exon

XP_030822744.1
type: Protein
SIO_000068: ncbiprotein

position:466915:1
position: 466915
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:468858:1
position: 468858
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:466915-467182:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:468059-468858:1:exon

UPF1
type: Gene
subclass of: SO_0000704
RO_0002162: 87175
gene: UPF1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(470654..496814)
location: region:470654-496814:-1
so has part: feature:470654-496814:-1:exon
subclass of: SO_0000010

115914380
type: Gene
SIO_000068: ncbigene

position:470654:-1
position: 470654
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:496814:-1
position: 496814
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:470654-496814:-1:exon

UPF1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 87175
gene: UPF1
product: UPF1 RNA helicase and ATPase, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 8 ESTs, 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
transcript id: XM_030966871.1
SIO_010081: UPF1
subclass of: SO_0000673
so part of: UPF1
location: complement(join(470654..473004,473860..473982,474315..474532,474622..474783,476075..476156,476791..476965,477605..477747,479187..479343,480385..480502,481431..481644,482974..483117,483733..483847,484029..484193,484430..484548,484667..484826,485621..485729,485933..486031,486180..486264,486855..487016,487464..487644,488409..488576,489311..489400,489983..490125,496548..496814))
location: region:470654-496814:-1
so has part: feature:496548-496814:-1:exon
so has part: feature:489983-490125:-1:exon
so has part: feature:489311-489400:-1:exon
so has part: feature:488409-488576:-1:exon
so has part: feature:487464-487644:-1:exon
so has part: feature:486855-487016:-1:exon
so has part: feature:486180-486264:-1:exon
so has part: feature:485933-486031:-1:exon
so has part: feature:485621-485729:-1:exon
so has part: feature:484667-484826:-1:exon
so has part: feature:484430-484548:-1:exon
so has part: feature:484029-484193:-1:exon
so has part: feature:483733-483847:-1:exon
so has part: feature:482974-483117:-1:exon
so has part: feature:481431-481644:-1:exon
so has part: feature:480385-480502:-1:exon
so has part: feature:479187-479343:-1:exon
so has part: feature:477605-477747:-1:exon
so has part: feature:476791-476965:-1:exon
so has part: feature:476075-476156:-1:exon
so has part: feature:474622-474783:-1:exon
so has part: feature:474315-474532:-1:exon
so has part: feature:473860-473982:-1:exon
so has part: feature:470654-473004:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:496548-496814:-1:exon

position:496548:-1
position: 496548
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:489983-490125:-1:exon

position:489983:-1
position: 489983
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:490125:-1
position: 490125
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:489311-489400:-1:exon

position:489311:-1
position: 489311
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:489400:-1
position: 489400
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:488409-488576:-1:exon

position:488409:-1
position: 488409
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:488576:-1
position: 488576
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:487464-487644:-1:exon

position:487464:-1
position: 487464
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:487644:-1
position: 487644
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:486855-487016:-1:exon

position:486855:-1
position: 486855
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:487016:-1
position: 487016
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:486180-486264:-1:exon

position:486180:-1
position: 486180
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:486264:-1
position: 486264
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:485933-486031:-1:exon

position:485933:-1
position: 485933
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:486031:-1
position: 486031
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:485621-485729:-1:exon

position:485621:-1
position: 485621
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:485729:-1
position: 485729
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:484667-484826:-1:exon

position:484667:-1
position: 484667
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:484826:-1
position: 484826
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:484430-484548:-1:exon

position:484430:-1
position: 484430
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:484548:-1
position: 484548
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:484029-484193:-1:exon

position:484029:-1
position: 484029
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:484193:-1
position: 484193
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:483733-483847:-1:exon

position:483733:-1
position: 483733
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:483847:-1
position: 483847
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:482974-483117:-1:exon

position:482974:-1
position: 482974
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:483117:-1
position: 483117
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:481431-481644:-1:exon

position:481431:-1
position: 481431
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:481644:-1
position: 481644
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:480385-480502:-1:exon

position:480385:-1
position: 480385
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:480502:-1
position: 480502
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:479187-479343:-1:exon

position:479187:-1
position: 479187
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:479343:-1
position: 479343
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:477605-477747:-1:exon

position:477605:-1
position: 477605
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:477747:-1
position: 477747
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:476791-476965:-1:exon

position:476791:-1
position: 476791
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:476965:-1
position: 476965
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:476075-476156:-1:exon

position:476075:-1
position: 476075
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:476156:-1
position: 476156
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:474622-474783:-1:exon

position:474622:-1
position: 474622
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:474783:-1
position: 474783
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 22
SIO_000628: feature:474315-474532:-1:exon

position:474315:-1
position: 474315
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:474532:-1
position: 474532
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 23
SIO_000628: feature:473860-473982:-1:exon

position:473860:-1
position: 473860
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:473982:-1
position: 473982
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 24
SIO_000628: feature:470654-473004:-1:exon

position:473004:-1
position: 473004
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

UPF1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 87175
gene: UPF1
product: UPF1 RNA helicase and ATPase, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 8 ESTs, 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XM_030966870.1
SIO_010081: UPF1
subclass of: SO_0000673
so part of: UPF1
location: complement(join(470654..473004,473860..473982,474315..474532,474622..474783,476075..476156,476791..476965,477605..477747,479187..479343,480385..480502,481431..481644,482974..483117,483733..483847,484029..484193,484430..484548,484667..484826,485621..485738,485933..486031,486180..486264,486855..487016,487464..487644,488409..488576,489311..489400,489983..490125,496548..496814))
location: region:470654-496814:-1
so has part: feature:496548-496814:-1:exon
so has part: feature:489983-490125:-1:exon
so has part: feature:489311-489400:-1:exon
so has part: feature:488409-488576:-1:exon
so has part: feature:487464-487644:-1:exon
so has part: feature:486855-487016:-1:exon
so has part: feature:486180-486264:-1:exon
so has part: feature:485933-486031:-1:exon
so has part: feature:485621-485738:-1:exon
so has part: feature:484667-484826:-1:exon
so has part: feature:484430-484548:-1:exon
so has part: feature:484029-484193:-1:exon
so has part: feature:483733-483847:-1:exon
so has part: feature:482974-483117:-1:exon
so has part: feature:481431-481644:-1:exon
so has part: feature:480385-480502:-1:exon
so has part: feature:479187-479343:-1:exon
so has part: feature:477605-477747:-1:exon
so has part: feature:476791-476965:-1:exon
so has part: feature:476075-476156:-1:exon
so has part: feature:474622-474783:-1:exon
so has part: feature:474315-474532:-1:exon
so has part: feature:473860-473982:-1:exon
so has part: feature:470654-473004:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:496548-496814:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:489983-490125:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:489311-489400:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:488409-488576:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:487464-487644:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:486855-487016:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:486180-486264:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:485933-486031:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:485621-485738:-1:exon

position:485738:-1
position: 485738
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:484667-484826:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:484430-484548:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:484029-484193:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:483733-483847:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:482974-483117:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:481431-481644:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:480385-480502:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:479187-479343:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:477605-477747:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:476791-476965:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:476075-476156:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:474622-474783:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:474315-474532:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:473860-473982:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:470654-473004:-1:exon

UPF1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 87175
gene: UPF1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: regulator of nonsense transcripts 1 isoform X2
translation: MSVEAYGPSSQTLTFLDTEEAELLGADTQGSEFEFTDFTLPSQTQTPPGPGQAGPAQGQGPPGAGQGAPGPLEAQVNGPDGILQNGAVDENVAKTSQLLAELNFEEDEEDTYYTKDLPVHACSYCGIHDPACVVYCNTSKKWFCNGRGNTSGSHIVNHLVRAKCKEVTLHKDGPLGETVLECYNCGCRNVFLLGFIPAKADSVVVLLCRQPCASQSSLKDINWDSSQWQPLIQDRCFLSWLVKIPSEQEQLRARQITAQQINKLEELWKENPSATLEDLEKPGVDEEPQHVLLRYEDAYQYQNIFGPLVKLEADYDKKLKESQTQDNITVRWDLGLNKKRIAYFTLPKTDSDMRLMQGDEICLRYKGDLAPLWKGIGHVIKVPDNYGDEIAIELRSSVGAPVEVTHNFQVDFVWKSTSFDRMQSALKTFAVDETSVSGYIYHKLLGHEVEDVIIKCQLPKRFTAQGLPDLNHSQVYAVKTVLQRPLSLIQGPPGTGKTVTSATIVYHLARQGNGPVLVCAPSNIAVDQLTEKIHQTGLKVVRLCAKSREAIDSPVSFLALHNQIRNMDSMPELQKLQQLKDETGELSSADEKRYRALKRTAERELLMNADVICCTCVGAGDPRLAKMQFRSILIDESTQATEPECMVPVVLGAKQLILVGDHCQLGPVVMCKKAAKAGLSQSLFERLVVLGIRPIRLQVQYRMHPALSAFPSNIFYEGSLQNGVTAADRVKKGFDFQWPQPDKPMFFYVTQGQEEIASSGTSYLNRTEAANVEKITTKLLKAGAKPDQIGIITPYEGQRSYLVQYMQFSGSLHTKLYQEVEIASVDAFQGREKDFIILSCVRANEHQGIGFLNDPRRLNVALTRARYGVIIVGNPKALSKQPLWNHLLNYYKEQKVLVEGPLNNLRESLMQFSKPRKLVNTINPGARFMTTAMYDAREAIIPGSVYDRSSQGRPSNMYFQTHDQIGMISAGPSHVTAMNIPIPFNLVMPPMPPPGYFGQANGPAAGRGAPKGKAGRGGRQKNRFGIPGTSQSNLPNSQASQDVVSQPFSQGPLTQGYISMSQPSQMSQPGLSQPELSQDSYLGDEFKSQIDVALSQDSTYQGERAYQHGGVTGLSQY
SIO_010081: UPF1
subclass of: SO_0000673
so part of: UPF1
location: complement(join(473863..473982,474315..474532,474622..474783,476075..476156,476791..476965,477605..477747,479187..479343,480385..480502,481431..481644,482974..483117,483733..483847,484029..484193,484430..484548,484667..484826,485621..485729,485933..486031,486180..486264,486855..487016,487464..487644,488409..488576,489311..489400,489983..490125,496548..496772))
location: region:473863-496772:-1
so has part: feature:496548-496772:-1:exon
so has part: feature:489983-490125:-1:exon
so has part: feature:489311-489400:-1:exon
so has part: feature:488409-488576:-1:exon
so has part: feature:487464-487644:-1:exon
so has part: feature:486855-487016:-1:exon
so has part: feature:486180-486264:-1:exon
so has part: feature:485933-486031:-1:exon
so has part: feature:485621-485729:-1:exon
so has part: feature:484667-484826:-1:exon
so has part: feature:484430-484548:-1:exon
so has part: feature:484029-484193:-1:exon
so has part: feature:483733-483847:-1:exon
so has part: feature:482974-483117:-1:exon
so has part: feature:481431-481644:-1:exon
so has part: feature:480385-480502:-1:exon
so has part: feature:479187-479343:-1:exon
so has part: feature:477605-477747:-1:exon
so has part: feature:476791-476965:-1:exon
so has part: feature:476075-476156:-1:exon
so has part: feature:474622-474783:-1:exon
so has part: feature:474315-474532:-1:exon
so has part: feature:473863-473982:-1:exon

XP_030822731.1
type: Protein
SIO_000068: ncbiprotein

position:473863:-1
position: 473863
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:496772:-1
position: 496772
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:496548-496772:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:489983-490125:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:489311-489400:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:488409-488576:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:487464-487644:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:486855-487016:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:486180-486264:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:485933-486031:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:485621-485729:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:484667-484826:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:484430-484548:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:484029-484193:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:483733-483847:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:482974-483117:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:481431-481644:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:480385-480502:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:479187-479343:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:477605-477747:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:476791-476965:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:476075-476156:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:474622-474783:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:474315-474532:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:473863-473982:-1:exon

UPF1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 87175
gene: UPF1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: regulator of nonsense transcripts 1 isoform X1
translation: MSVEAYGPSSQTLTFLDTEEAELLGADTQGSEFEFTDFTLPSQTQTPPGPGQAGPAQGQGPPGAGQGAPGPLEAQVNGPDGILQNGAVDENVAKTSQLLAELNFEEDEEDTYYTKDLPVHACSYCGIHDPACVVYCNTSKKWFCNGRGNTSGSHIVNHLVRAKCKEVTLHKDGPLGETVLECYNCGCRNVFLLGFIPAKADSVVVLLCRQPCASQSSLKDINWDSSQWQPLIQDRCFLSWLVKIPSEQEQLRARQITAQQINKLEELWKENPSATLEDLEKPGVDEEPQHVLLRYEDAYQYQNIFGPLVKLEADYDKKLKESQTQDNITVRWDLGLNKKRIAYFTLPKTDSDMRLMQGDEICLRYKGDLAPLWKGIGHVIKVPDSSTDYGDEIAIELRSSVGAPVEVTHNFQVDFVWKSTSFDRMQSALKTFAVDETSVSGYIYHKLLGHEVEDVIIKCQLPKRFTAQGLPDLNHSQVYAVKTVLQRPLSLIQGPPGTGKTVTSATIVYHLARQGNGPVLVCAPSNIAVDQLTEKIHQTGLKVVRLCAKSREAIDSPVSFLALHNQIRNMDSMPELQKLQQLKDETGELSSADEKRYRALKRTAERELLMNADVICCTCVGAGDPRLAKMQFRSILIDESTQATEPECMVPVVLGAKQLILVGDHCQLGPVVMCKKAAKAGLSQSLFERLVVLGIRPIRLQVQYRMHPALSAFPSNIFYEGSLQNGVTAADRVKKGFDFQWPQPDKPMFFYVTQGQEEIASSGTSYLNRTEAANVEKITTKLLKAGAKPDQIGIITPYEGQRSYLVQYMQFSGSLHTKLYQEVEIASVDAFQGREKDFIILSCVRANEHQGIGFLNDPRRLNVALTRARYGVIIVGNPKALSKQPLWNHLLNYYKEQKVLVEGPLNNLRESLMQFSKPRKLVNTINPGARFMTTAMYDAREAIIPGSVYDRSSQGRPSNMYFQTHDQIGMISAGPSHVTAMNIPIPFNLVMPPMPPPGYFGQANGPAAGRGAPKGKAGRGGRQKNRFGIPGTSQSNLPNSQASQDVVSQPFSQGPLTQGYISMSQPSQMSQPGLSQPELSQDSYLGDEFKSQIDVALSQDSTYQGERAYQHGGVTGLSQY
SIO_010081: UPF1
subclass of: SO_0000673
so part of: UPF1
location: complement(join(473863..473982,474315..474532,474622..474783,476075..476156,476791..476965,477605..477747,479187..479343,480385..480502,481431..481644,482974..483117,483733..483847,484029..484193,484430..484548,484667..484826,485621..485738,485933..486031,486180..486264,486855..487016,487464..487644,488409..488576,489311..489400,489983..490125,496548..496772))
location: region:473863-496772:-1
so has part: feature:496548-496772:-1:exon
so has part: feature:489983-490125:-1:exon
so has part: feature:489311-489400:-1:exon
so has part: feature:488409-488576:-1:exon
so has part: feature:487464-487644:-1:exon
so has part: feature:486855-487016:-1:exon
so has part: feature:486180-486264:-1:exon
so has part: feature:485933-486031:-1:exon
so has part: feature:485621-485738:-1:exon
so has part: feature:484667-484826:-1:exon
so has part: feature:484430-484548:-1:exon
so has part: feature:484029-484193:-1:exon
so has part: feature:483733-483847:-1:exon
so has part: feature:482974-483117:-1:exon
so has part: feature:481431-481644:-1:exon
so has part: feature:480385-480502:-1:exon
so has part: feature:479187-479343:-1:exon
so has part: feature:477605-477747:-1:exon
so has part: feature:476791-476965:-1:exon
so has part: feature:476075-476156:-1:exon
so has part: feature:474622-474783:-1:exon
so has part: feature:474315-474532:-1:exon
so has part: feature:473863-473982:-1:exon

XP_030822730.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:496548-496772:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:489983-490125:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:489311-489400:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:488409-488576:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:487464-487644:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:486855-487016:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:486180-486264:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:485933-486031:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:485621-485738:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:484667-484826:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:484430-484548:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:484029-484193:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:483733-483847:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:482974-483117:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:481431-481644:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:480385-480502:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:479187-479343:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:477605-477747:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:476791-476965:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:476075-476156:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:474622-474783:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:474315-474532:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:473863-473982:-1:exon

LOC115914349
type: Gene
subclass of: SO_0000704
RO_0002162: 87175
gene: LOC115914349
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 499357..502292
location: region:499357-502292:1
so has part: feature:499357-502292:1:exon
subclass of: SO_0000011

115914349
type: Gene
SIO_000068: ncbigene

position:499357:1
position: 499357
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:502292:1
position: 502292
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:499357-502292:1:exon

LOC115914349
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 87175
nc RNA class: lncRNA
gene: LOC115914349
product: uncharacterized LOC115914349
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XR_004061420.1
SIO_010081: LOC115914349
subclass of: SO_0000673
so part of: LOC115914349
location: join(499357..499679,500775..500910,502102..502292)
location: region:499357-502292:1
so has part: feature:499357-499679:1:exon
so has part: feature:500775-500910:1:exon
so has part: feature:502102-502292:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:499357-499679:1:exon

position:499679:1
position: 499679
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:500775-500910:1:exon

position:500775:1
position: 500775
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:500910:1
position: 500910
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:502102-502292:1:exon

position:502102:1
position: 502102
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

COMP
type: Gene
subclass of: SO_0000704
RO_0002162: 87175
gene: COMP
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 517187..535937
location: region:517187-535937:1
so has part: feature:517187-535937:1:exon
subclass of: SO_0000010

115914287
type: Gene
SIO_000068: ncbigene

position:517187:1
position: 517187
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:535937:1
position: 535937
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:517187-535937:1:exon

COMP
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 87175
gene: COMP
product: cartilage oligomeric matrix protein
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, 41 Proteins, and 97% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_030966732.1
SIO_010081: COMP
subclass of: SO_0000673
so part of: COMP
location: join(517187..517350,520511..520594,522443..522531,522890..522941,525041..525210,526631..526768,528016..528093,528407..528574,529536..529640,529762..529869,530643..530802,531584..531702,531979..532031,533165..533358,533906..534084,534235..534283,534439..534635,534746..534918,535100..535239,535371..535937)
location: region:517187-535937:1
so has part: feature:517187-517350:1:exon
so has part: feature:520511-520594:1:exon
so has part: feature:522443-522531:1:exon
so has part: feature:522890-522941:1:exon
so has part: feature:525041-525210:1:exon
so has part: feature:526631-526768:1:exon
so has part: feature:528016-528093:1:exon
so has part: feature:528407-528574:1:exon
so has part: feature:529536-529640:1:exon
so has part: feature:529762-529869:1:exon
so has part: feature:530643-530802:1:exon
so has part: feature:531584-531702:1:exon
so has part: feature:531979-532031:1:exon
so has part: feature:533165-533358:1:exon
so has part: feature:533906-534084:1:exon
so has part: feature:534235-534283:1:exon
so has part: feature:534439-534635:1:exon
so has part: feature:534746-534918:1:exon
so has part: feature:535100-535239:1:exon
so has part: feature:535371-535937:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:517187-517350:1:exon

position:517350:1
position: 517350
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:520511-520594:1:exon

position:520511:1
position: 520511
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:520594:1
position: 520594
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:522443-522531:1:exon

position:522443:1
position: 522443
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:522531:1
position: 522531
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:522890-522941:1:exon

position:522890:1
position: 522890
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:522941:1
position: 522941
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:525041-525210:1:exon

position:525041:1
position: 525041
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:525210:1
position: 525210
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:526631-526768:1:exon

position:526631:1
position: 526631
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:526768:1
position: 526768
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:528016-528093:1:exon

position:528016:1
position: 528016
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:528093:1
position: 528093
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:528407-528574:1:exon

position:528407:1
position: 528407
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:528574:1
position: 528574
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:529536-529640:1:exon

position:529536:1
position: 529536
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:529640:1
position: 529640
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:529762-529869:1:exon

position:529762:1
position: 529762
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:529869:1
position: 529869
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:530643-530802:1:exon

position:530643:1
position: 530643
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:530802:1
position: 530802
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:531584-531702:1:exon

position:531584:1
position: 531584
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:531702:1
position: 531702
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:531979-532031:1:exon

position:531979:1
position: 531979
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:532031:1
position: 532031
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:533165-533358:1:exon

position:533165:1
position: 533165
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:533358:1
position: 533358
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:533906-534084:1:exon

position:533906:1
position: 533906
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:534084:1
position: 534084
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:534235-534283:1:exon

position:534235:1
position: 534235
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:534283:1
position: 534283
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:534439-534635:1:exon

position:534439:1
position: 534439
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:534635:1
position: 534635
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:534746-534918:1:exon

position:534746:1
position: 534746
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:534918:1
position: 534918
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:535100-535239:1:exon

position:535100:1
position: 535100
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:535239:1
position: 535239
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:535371-535937:1:exon

position:535371:1
position: 535371
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

COMP
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 87175
gene: COMP
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: cartilage oligomeric matrix protein
translation: MLPAPLAPLLLLLLFACAPGRGQQRRIDPSRPFPSAAAGREPALSRGIPGNALGAGGGEVGPEMLQEMRETNRVLLEVRDLLKQQIKEITFLKNTVMECDACGCGEVRPVTVPVLSGPRCVPSPCFPGVPCTESGGGFRCGPCPAGYTGNGTHCSDINECNANPCFPKVQCINTNPGFRCDPCPPGFTGQLLEGVGLAFARANKQVCTDINECETGAARNCVPNSICINTRGSYKCGACKPGFVGDQISGCRSQTATGARRCPNGEISPCHEKAECIVERDGSLSCQCLVGWAGNGYVCGKDTDIDGVPDEKQRCSDKKCRKDNCMTVPNSGQEDADRDGIGDACDDDADGDGIPNAEDNCVYTRNTDQRNADKDNFGDACDNCRQVKNNDQRDIDGDGKGDECDEDMDGDGIKNTVDNCRRVPNPDQRDGDGDGVGDACDSCPTLSNPDQKDTDHDLVGDVCDTNQDSDGDGHQDSRDNCPTVPNSSQVDTDGDGLGDECDEDDDDDGIPDFRPPGPDNCRLVPNPGQEDADGDGVGNLCEDDFDRDMVIDRIDVCPENAEVTLTDFRAFQTVVLDPEGDAQIDPNWIVLNQGMEIVQTMNSDPGLAVGYTAFNGVDFEGTFHVNTATDDDYAGFIFGYQDSSSFYVVMWKQMEQTYWQANPFRAVAEPGIQLKAVKSKTGPGEYLRNSLWHTGDTTDQVKLLWKDPRNSGWKDKTSYRWFLQHRPQVGYIRARFYEGPEVVADTGVVLDTTMRGGRLGVFCFSQENIIWSNLRYRCNDTIPEDYETFRFQQD
SIO_010081: COMP
subclass of: SO_0000673
so part of: COMP
location: join(517269..517350,520511..520594,522443..522531,522890..522941,525041..525210,526631..526768,528016..528093,528407..528574,529536..529640,529762..529869,530643..530802,531584..531702,531979..532031,533165..533358,533906..534084,534235..534283,534439..534635,534746..534918,535100..535239,535371..535417)
location: region:517269-535417:1
so has part: feature:517269-517350:1:exon
so has part: feature:520511-520594:1:exon
so has part: feature:522443-522531:1:exon
so has part: feature:522890-522941:1:exon
so has part: feature:525041-525210:1:exon
so has part: feature:526631-526768:1:exon
so has part: feature:528016-528093:1:exon
so has part: feature:528407-528574:1:exon
so has part: feature:529536-529640:1:exon
so has part: feature:529762-529869:1:exon
so has part: feature:530643-530802:1:exon
so has part: feature:531584-531702:1:exon
so has part: feature:531979-532031:1:exon
so has part: feature:533165-533358:1:exon
so has part: feature:533906-534084:1:exon
so has part: feature:534235-534283:1:exon
so has part: feature:534439-534635:1:exon
so has part: feature:534746-534918:1:exon
so has part: feature:535100-535239:1:exon
so has part: feature:535371-535417:1:exon

XP_030822592.1
type: Protein
SIO_000068: ncbiprotein

position:517269:1
position: 517269
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:535417:1
position: 535417
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:517269-517350:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:520511-520594:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:522443-522531:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:522890-522941:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:525041-525210:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:526631-526768:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:528016-528093:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:528407-528574:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:529536-529640:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:529762-529869:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:530643-530802:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:531584-531702:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:531979-532031:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:533165-533358:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:533906-534084:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:534235-534283:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:534439-534635:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:534746-534918:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:535100-535239:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:535371-535417:1:exon

CRTC1
type: Gene
subclass of: SO_0000704
RO_0002162: 87175
gene: CRTC1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(541065..583166)
location: region:541065-583166:-1
so has part: feature:541065-583166:-1:exon
subclass of: SO_0000010

115914282
type: Gene
SIO_000068: ncbigene

position:541065:-1
position: 541065
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:583166:-1
position: 583166
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:541065-583166:-1:exon

CRTC1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 87175
gene: CRTC1
product: CREB regulated transcription coactivator 1, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 1 EST, 7 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_030966724.1
SIO_010081: CRTC1
subclass of: SO_0000673
so part of: CRTC1
location: complement(join(541065..541834,543797..543977,545685..545771,549985..550086,552009..552260,553018..553151,555507..555727,557151..557194,557571..557656,558844..558938,559720..559781,560755..560892,564936..565052,583009..583166))
location: region:541065-583166:-1
so has part: feature:583009-583166:-1:exon
so has part: feature:564936-565052:-1:exon
so has part: feature:560755-560892:-1:exon
so has part: feature:559720-559781:-1:exon
so has part: feature:558844-558938:-1:exon
so has part: feature:557571-557656:-1:exon
so has part: feature:557151-557194:-1:exon
so has part: feature:555507-555727:-1:exon
so has part: feature:553018-553151:-1:exon
so has part: feature:552009-552260:-1:exon
so has part: feature:549985-550086:-1:exon
so has part: feature:545685-545771:-1:exon
so has part: feature:543797-543977:-1:exon
so has part: feature:541065-541834:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:583009-583166:-1:exon

position:583009:-1
position: 583009
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:564936-565052:-1:exon

position:564936:-1
position: 564936
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:565052:-1
position: 565052
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:560755-560892:-1:exon

position:560755:-1
position: 560755
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:560892:-1
position: 560892
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:559720-559781:-1:exon

position:559720:-1
position: 559720
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:559781:-1
position: 559781
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:558844-558938:-1:exon

position:558844:-1
position: 558844
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:558938:-1
position: 558938
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:557571-557656:-1:exon

position:557571:-1
position: 557571
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:557656:-1
position: 557656
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:557151-557194:-1:exon

position:557151:-1
position: 557151
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:557194:-1
position: 557194
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:555507-555727:-1:exon

position:555507:-1
position: 555507
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:555727:-1
position: 555727
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:553018-553151:-1:exon

position:553018:-1
position: 553018
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:553151:-1
position: 553151
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:552009-552260:-1:exon

position:552009:-1
position: 552009
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:552260:-1
position: 552260
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:549985-550086:-1:exon

position:549985:-1
position: 549985
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:550086:-1
position: 550086
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:545685-545771:-1:exon

position:545685:-1
position: 545685
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:545771:-1
position: 545771
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:543797-543977:-1:exon

position:543797:-1
position: 543797
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:543977:-1
position: 543977
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:541065-541834:-1:exon

position:541834:-1
position: 541834
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

CRTC1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 87175
gene: CRTC1
product: CREB regulated transcription coactivator 1, transcript variant X5
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 1 EST, 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
transcript id: XM_030966727.1
SIO_010081: CRTC1
subclass of: SO_0000673
so part of: CRTC1
location: complement(join(541065..541834,543797..543977,552009..552260,553018..553154,555507..555727,557151..557194,557571..557656,558844..558938,559720..559781,560755..560892,564936..565052,583009..583166))
location: region:541065-583166:-1
so has part: feature:583009-583166:-1:exon
so has part: feature:564936-565052:-1:exon
so has part: feature:560755-560892:-1:exon
so has part: feature:559720-559781:-1:exon
so has part: feature:558844-558938:-1:exon
so has part: feature:557571-557656:-1:exon
so has part: feature:557151-557194:-1:exon
so has part: feature:555507-555727:-1:exon
so has part: feature:553018-553154:-1:exon
so has part: feature:552009-552260:-1:exon
so has part: feature:543797-543977:-1:exon
so has part: feature:541065-541834:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:583009-583166:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:564936-565052:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:560755-560892:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:559720-559781:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:558844-558938:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:557571-557656:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:557151-557194:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:555507-555727:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:553018-553154:-1:exon

position:553154:-1
position: 553154
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:552009-552260:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:543797-543977:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:541065-541834:-1:exon

CRTC1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 87175
gene: CRTC1
product: CREB regulated transcription coactivator 1, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 1 EST, 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XM_030966725.1
SIO_010081: CRTC1
subclass of: SO_0000673
so part of: CRTC1
location: complement(join(541065..541834,543797..543977,545685..545771,552009..552260,553018..553154,555507..555727,557151..557194,557571..557656,558844..558938,559720..559781,560755..560892,564936..565052,583009..583166))
location: region:541065-583166:-1
so has part: feature:583009-583166:-1:exon
so has part: feature:564936-565052:-1:exon
so has part: feature:560755-560892:-1:exon
so has part: feature:559720-559781:-1:exon
so has part: feature:558844-558938:-1:exon
so has part: feature:557571-557656:-1:exon
so has part: feature:557151-557194:-1:exon
so has part: feature:555507-555727:-1:exon
so has part: feature:553018-553154:-1:exon
so has part: feature:552009-552260:-1:exon
so has part: feature:545685-545771:-1:exon
so has part: feature:543797-543977:-1:exon
so has part: feature:541065-541834:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:583009-583166:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:564936-565052:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:560755-560892:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:559720-559781:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:558844-558938:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:557571-557656:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:557151-557194:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:555507-555727:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:553018-553154:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:552009-552260:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:545685-545771:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:543797-543977:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:541065-541834:-1:exon

CRTC1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 87175
gene: CRTC1
product: CREB regulated transcription coactivator 1, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 1 EST, 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_030966723.1
SIO_010081: CRTC1
subclass of: SO_0000673
so part of: CRTC1
location: complement(join(541065..541552,541603..541834,543797..543977,545685..545771,549985..550086,552009..552260,553018..553154,555507..555727,557151..557194,557571..557656,558844..558938,559720..559781,560755..560892,564936..565052,583009..583166))
location: region:541065-583166:-1
so has part: feature:583009-583166:-1:exon
so has part: feature:564936-565052:-1:exon
so has part: feature:560755-560892:-1:exon
so has part: feature:559720-559781:-1:exon
so has part: feature:558844-558938:-1:exon
so has part: feature:557571-557656:-1:exon
so has part: feature:557151-557194:-1:exon
so has part: feature:555507-555727:-1:exon
so has part: feature:553018-553154:-1:exon
so has part: feature:552009-552260:-1:exon
so has part: feature:549985-550086:-1:exon
so has part: feature:545685-545771:-1:exon
so has part: feature:543797-543977:-1:exon
so has part: feature:541603-541834:-1:exon
so has part: feature:541065-541552:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:583009-583166:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:564936-565052:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:560755-560892:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:559720-559781:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:558844-558938:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:557571-557656:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:557151-557194:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:555507-555727:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:553018-553154:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:552009-552260:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:549985-550086:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:545685-545771:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:543797-543977:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:541603-541834:-1:exon

position:541603:-1
position: 541603
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:541065-541552:-1:exon

position:541552:-1
position: 541552
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

CRTC1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 87175
gene: CRTC1
product: CREB regulated transcription coactivator 1, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 1 EST, 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_030966722.1
SIO_010081: CRTC1
subclass of: SO_0000673
so part of: CRTC1
location: complement(join(541065..541834,543797..543977,545685..545771,549985..550086,552009..552260,553018..553154,555507..555727,557151..557194,557571..557656,558844..558938,559720..559781,560755..560892,564936..565052,583009..583166))
location: region:541065-583166:-1
so has part: feature:583009-583166:-1:exon
so has part: feature:564936-565052:-1:exon
so has part: feature:560755-560892:-1:exon
so has part: feature:559720-559781:-1:exon
so has part: feature:558844-558938:-1:exon
so has part: feature:557571-557656:-1:exon
so has part: feature:557151-557194:-1:exon
so has part: feature:555507-555727:-1:exon
so has part: feature:553018-553154:-1:exon
so has part: feature:552009-552260:-1:exon
so has part: feature:549985-550086:-1:exon
so has part: feature:545685-545771:-1:exon
so has part: feature:543797-543977:-1:exon
so has part: feature:541065-541834:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:583009-583166:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:564936-565052:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:560755-560892:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:559720-559781:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:558844-558938:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:557571-557656:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:557151-557194:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:555507-555727:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:553018-553154:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:552009-552260:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:549985-550086:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:545685-545771:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:543797-543977:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:541065-541834:-1:exon

CRTC1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 87175
gene: CRTC1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: CREB-regulated transcription coactivator 1 isoform X2
translation: MAASNNPRKFSEKIALHNQKQAEETAAFEEVMKDLSLTRAHRLQLQKTQYLQLGQSRGQYYGGSLPNVNQIGNSAMDLPFQTPFQSSALDTSRTTRHHGLVDRVYRDRNRLGSPHRRPLSVDKHGRQVDSCPYGTVYLSPPSDTSWRRTNSDSALHQSTMTPAQQESFSGGSQDMQQKRVLLLTVPGMEEPTSDADKTLSKQGWDTKKTGSSRPKSCEVPGINIFPSAEQENTTALIPGTHNTGGSLPDLTNIHFPSPLPTPLDPEESSFPALSSSSSTGNLAANLTHLGISTASQGMTTTPAPSQHRQPNVSPLSLGTDSRRPQSQQMSPTLSPLSPITQAVAMDALSLEQQLPPYPFFTQTSSQQQQQPAVASSLPQTPPLLQSSALQRGPQLPPLSVTVPSSMPQSPPGSQSQPSMGIDINSASLQQYRSNAGSPANQSPTSPVSNQGFSPGSSPQHSSMLGSVFGDSYYEQQMTARQANALSHQLEQFNMIENAISSNSLYSPCSTLNYSQAAMMGLTGSHGSLQDSQQLNYSSHSNIPNIILTVTGESPPSLSKELTSSLAGVGDVSFDTDSQFPLDELKIDPLTLDGLHMLNDPDMVLTDPATEDTFRMDRL
SIO_010081: CRTC1
subclass of: SO_0000673
so part of: CRTC1
location: complement(join(541623..541834,543797..543977,545685..545771,549985..550086,552009..552260,553018..553151,555507..555727,557151..557194,557571..557656,558844..558938,559720..559781,560755..560892,564936..565052,583009..583134))
location: region:541623-583134:-1
so has part: feature:583009-583134:-1:exon
so has part: feature:564936-565052:-1:exon
so has part: feature:560755-560892:-1:exon
so has part: feature:559720-559781:-1:exon
so has part: feature:558844-558938:-1:exon
so has part: feature:557571-557656:-1:exon
so has part: feature:557151-557194:-1:exon
so has part: feature:555507-555727:-1:exon
so has part: feature:553018-553151:-1:exon
so has part: feature:552009-552260:-1:exon
so has part: feature:549985-550086:-1:exon
so has part: feature:545685-545771:-1:exon
so has part: feature:543797-543977:-1:exon
so has part: feature:541623-541834:-1:exon

XP_030822584.1
type: Protein
SIO_000068: ncbiprotein

position:541623:-1
position: 541623
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:583134:-1
position: 583134
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:583009-583134:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:564936-565052:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:560755-560892:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:559720-559781:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:558844-558938:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:557571-557656:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:557151-557194:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:555507-555727:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:553018-553151:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:552009-552260:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:549985-550086:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:545685-545771:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:543797-543977:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:541623-541834:-1:exon

CRTC1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 87175
gene: CRTC1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: CREB-regulated transcription coactivator 1 isoform X4
translation: MAASNNPRKFSEKIALHNQKQAEETAAFEEVMKDLSLTRAHRLQLQKTQYLQLGQSRGQYYGGSLPNVNQIGNSAMDLPFQTPFQSSALDTSRTTRHHGLVDRVYRDRNRLGSPHRRPLSVDKHGRQVDSCPYGTVYLSPPSDTSWRRTNSDSALHQSTMTPAQQESFSGGSQDMQQKRVLLLTVPGMEEPTSDADKTLSKQGWDTKKTGSSRPKSCEVPGINIFPSAEQENTTALIPGTHNTGGSLPDLTNIHFPSPLPTPLDPEESSFPALSSSSSTGNLAANLTHLGISTASQAGMTTTPAPSQHRQPNVSPLSLGTDSRRPQSQQMSPTLSPLSPITQAVAMDALSLEQQLPPYPFFTQTSSQQQQQPAVASSLPQTPPLLQSSALQRGPQLPPLSVTVPSSMPQSPPGSQSQPSMGIDINSLEQFNMIENAISSNSLYSPCSTLNYSQAAMMGLTGSHGSLQDSQQLNYSSHSNIPNIILTVTGESPPSLSKELTSSLAGVGDVSFDTDSQFPLDELKIDPLTLDGLHMLNDPDMVLTDPATEDTFRMDRL
SIO_010081: CRTC1
subclass of: SO_0000673
so part of: CRTC1
location: complement(join(541623..541834,543797..543977,552009..552260,553018..553154,555507..555727,557151..557194,557571..557656,558844..558938,559720..559781,560755..560892,564936..565052,583009..583134))
location: region:541623-583134:-1
so has part: feature:583009-583134:-1:exon
so has part: feature:564936-565052:-1:exon
so has part: feature:560755-560892:-1:exon
so has part: feature:559720-559781:-1:exon
so has part: feature:558844-558938:-1:exon
so has part: feature:557571-557656:-1:exon
so has part: feature:557151-557194:-1:exon
so has part: feature:555507-555727:-1:exon
so has part: feature:553018-553154:-1:exon
so has part: feature:552009-552260:-1:exon
so has part: feature:543797-543977:-1:exon
so has part: feature:541623-541834:-1:exon

XP_030822587.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:583009-583134:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:564936-565052:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:560755-560892:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:559720-559781:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:558844-558938:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:557571-557656:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:557151-557194:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:555507-555727:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:553018-553154:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:552009-552260:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:543797-543977:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:541623-541834:-1:exon

CRTC1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 87175
gene: CRTC1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: CREB-regulated transcription coactivator 1 isoform X3
translation: MAASNNPRKFSEKIALHNQKQAEETAAFEEVMKDLSLTRAHRLQLQKTQYLQLGQSRGQYYGGSLPNVNQIGNSAMDLPFQTPFQSSALDTSRTTRHHGLVDRVYRDRNRLGSPHRRPLSVDKHGRQVDSCPYGTVYLSPPSDTSWRRTNSDSALHQSTMTPAQQESFSGGSQDMQQKRVLLLTVPGMEEPTSDADKTLSKQGWDTKKTGSSRPKSCEVPGINIFPSAEQENTTALIPGTHNTGGSLPDLTNIHFPSPLPTPLDPEESSFPALSSSSSTGNLAANLTHLGISTASQAGMTTTPAPSQHRQPNVSPLSLGTDSRRPQSQQMSPTLSPLSPITQAVAMDALSLEQQLPPYPFFTQTSSQQQQQPAVASSLPQTPPLLQSSALQRGPQLPPLSVTVPSSMPQSPPGSQSQPSMGIDINSHSSMLGSVFGDSYYEQQMTARQANALSHQLEQFNMIENAISSNSLYSPCSTLNYSQAAMMGLTGSHGSLQDSQQLNYSSHSNIPNIILTVTGESPPSLSKELTSSLAGVGDVSFDTDSQFPLDELKIDPLTLDGLHMLNDPDMVLTDPATEDTFRMDRL
SIO_010081: CRTC1
subclass of: SO_0000673
so part of: CRTC1
location: complement(join(541623..541834,543797..543977,545685..545771,552009..552260,553018..553154,555507..555727,557151..557194,557571..557656,558844..558938,559720..559781,560755..560892,564936..565052,583009..583134))
location: region:541623-583134:-1
so has part: feature:583009-583134:-1:exon
so has part: feature:564936-565052:-1:exon
so has part: feature:560755-560892:-1:exon
so has part: feature:559720-559781:-1:exon
so has part: feature:558844-558938:-1:exon
so has part: feature:557571-557656:-1:exon
so has part: feature:557151-557194:-1:exon
so has part: feature:555507-555727:-1:exon
so has part: feature:553018-553154:-1:exon
so has part: feature:552009-552260:-1:exon
so has part: feature:545685-545771:-1:exon
so has part: feature:543797-543977:-1:exon
so has part: feature:541623-541834:-1:exon

XP_030822585.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:583009-583134:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:564936-565052:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:560755-560892:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:559720-559781:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:558844-558938:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:557571-557656:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:557151-557194:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:555507-555727:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:553018-553154:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:552009-552260:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:545685-545771:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:543797-543977:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:541623-541834:-1:exon

CRTC1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 87175
gene: CRTC1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: CREB-regulated transcription coactivator 1 isoform X1
translation: MAASNNPRKFSEKIALHNQKQAEETAAFEEVMKDLSLTRAHRLQLQKTQYLQLGQSRGQYYGGSLPNVNQIGNSAMDLPFQTPFQSSALDTSRTTRHHGLVDRVYRDRNRLGSPHRRPLSVDKHGRQVDSCPYGTVYLSPPSDTSWRRTNSDSALHQSTMTPAQQESFSGGSQDMQQKRVLLLTVPGMEEPTSDADKTLSKQGWDTKKTGSSRPKSCEVPGINIFPSAEQENTTALIPGTHNTGGSLPDLTNIHFPSPLPTPLDPEESSFPALSSSSSTGNLAANLTHLGISTASQAGMTTTPAPSQHRQPNVSPLSLGTDSRRPQSQQMSPTLSPLSPITQAVAMDALSLEQQLPPYPFFTQTSSQQQQQPAVASSLPQTPPLLQSSALQRGPQLPPLSVTVPSSMPQSPPGSQSQPSMGIDINSASLQQYRSNAGSPANQSPTSPVSNQGFSPGSSPQHSSMLGSVFGDSYYEQQMTARQANALSHQLEQFNMIENAISSNSLYSPCSTLNYSQAAMMGLTGSHGSLQDSQQLNYSSHSNIPNIILTVTGESPPSLSKELTSSLAGVGDVSFDTDSQFPLDELKIDPLTLDGLHMLNDPDMVLTDPATEDTFRMDRL
SIO_010081: CRTC1
subclass of: SO_0000673
so part of: CRTC1
location: complement(join(541623..541834,543797..543977,545685..545771,549985..550086,552009..552260,553018..553154,555507..555727,557151..557194,557571..557656,558844..558938,559720..559781,560755..560892,564936..565052,583009..583134))
location: region:541623-583134:-1
so has part: feature:583009-583134:-1:exon
so has part: feature:564936-565052:-1:exon
so has part: feature:560755-560892:-1:exon
so has part: feature:559720-559781:-1:exon
so has part: feature:558844-558938:-1:exon
so has part: feature:557571-557656:-1:exon
so has part: feature:557151-557194:-1:exon
so has part: feature:555507-555727:-1:exon
so has part: feature:553018-553154:-1:exon
so has part: feature:552009-552260:-1:exon
so has part: feature:549985-550086:-1:exon
so has part: feature:545685-545771:-1:exon
so has part: feature:543797-543977:-1:exon
so has part: feature:541623-541834:-1:exon

XP_030822582.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:583009-583134:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:564936-565052:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:560755-560892:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:559720-559781:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:558844-558938:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:557571-557656:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:557151-557194:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:555507-555727:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:553018-553154:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:552009-552260:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:549985-550086:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:545685-545771:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:543797-543977:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:541623-541834:-1:exon

CRTC1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 87175
gene: CRTC1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: CREB-regulated transcription coactivator 1 isoform X1
translation: MAASNNPRKFSEKIALHNQKQAEETAAFEEVMKDLSLTRAHRLQLQKTQYLQLGQSRGQYYGGSLPNVNQIGNSAMDLPFQTPFQSSALDTSRTTRHHGLVDRVYRDRNRLGSPHRRPLSVDKHGRQVDSCPYGTVYLSPPSDTSWRRTNSDSALHQSTMTPAQQESFSGGSQDMQQKRVLLLTVPGMEEPTSDADKTLSKQGWDTKKTGSSRPKSCEVPGINIFPSAEQENTTALIPGTHNTGGSLPDLTNIHFPSPLPTPLDPEESSFPALSSSSSTGNLAANLTHLGISTASQAGMTTTPAPSQHRQPNVSPLSLGTDSRRPQSQQMSPTLSPLSPITQAVAMDALSLEQQLPPYPFFTQTSSQQQQQPAVASSLPQTPPLLQSSALQRGPQLPPLSVTVPSSMPQSPPGSQSQPSMGIDINSASLQQYRSNAGSPANQSPTSPVSNQGFSPGSSPQHSSMLGSVFGDSYYEQQMTARQANALSHQLEQFNMIENAISSNSLYSPCSTLNYSQAAMMGLTGSHGSLQDSQQLNYSSHSNIPNIILTVTGESPPSLSKELTSSLAGVGDVSFDTDSQFPLDELKIDPLTLDGLHMLNDPDMVLTDPATEDTFRMDRL
SIO_010081: CRTC1
subclass of: SO_0000673
so part of: CRTC1
location: complement(join(541623..541834,543797..543977,545685..545771,549985..550086,552009..552260,553018..553154,555507..555727,557151..557194,557571..557656,558844..558938,559720..559781,560755..560892,564936..565052,583009..583134))
location: region:541623-583134:-1
so has part: feature:583009-583134:-1:exon
so has part: feature:564936-565052:-1:exon
so has part: feature:560755-560892:-1:exon
so has part: feature:559720-559781:-1:exon
so has part: feature:558844-558938:-1:exon
so has part: feature:557571-557656:-1:exon
so has part: feature:557151-557194:-1:exon
so has part: feature:555507-555727:-1:exon
so has part: feature:553018-553154:-1:exon
so has part: feature:552009-552260:-1:exon
so has part: feature:549985-550086:-1:exon
so has part: feature:545685-545771:-1:exon
so has part: feature:543797-543977:-1:exon
so has part: feature:541623-541834:-1:exon

XP_030822583.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:583009-583134:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:564936-565052:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:560755-560892:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:559720-559781:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:558844-558938:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:557571-557656:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:557151-557194:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:555507-555727:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:553018-553154:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:552009-552260:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:549985-550086:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:545685-545771:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:543797-543977:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:541623-541834:-1:exon

KLHL26
type: Gene
subclass of: SO_0000704
RO_0002162: 87175
gene: KLHL26
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(591394..610020)
location: region:591394-610020:-1
so has part: feature:591394-610020:-1:exon
subclass of: SO_0000010

115914268
type: Gene
SIO_000068: ncbigene

position:591394:-1
position: 591394
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:610020:-1
position: 610020
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:591394-610020:-1:exon

KLHL26
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 87175
gene: KLHL26
product: kelch like family member 26, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 15 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_030966698.1
SIO_010081: KLHL26
subclass of: SO_0000673
so part of: KLHL26
location: complement(join(591394..594171,596781..596963,609932..610020))
location: region:591394-610020:-1
so has part: feature:609932-610020:-1:exon
so has part: feature:596781-596963:-1:exon
so has part: feature:591394-594171:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:609932-610020:-1:exon

position:609932:-1
position: 609932
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:596781-596963:-1:exon

position:596781:-1
position: 596781
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:596963:-1
position: 596963
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:591394-594171:-1:exon

position:594171:-1
position: 594171
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

KLHL26
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 87175
gene: KLHL26
product: kelch like family member 26, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 15 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_030966697.1
SIO_010081: KLHL26
subclass of: SO_0000673
so part of: KLHL26
location: complement(join(591394..594171,596781..596963,609376..609430))
location: region:591394-609430:-1
so has part: feature:609376-609430:-1:exon
so has part: feature:596781-596963:-1:exon
so has part: feature:591394-594171:-1:exon

position:609430:-1
position: 609430
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:609376-609430:-1:exon

position:609376:-1
position: 609376
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:596781-596963:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:591394-594171:-1:exon

KLHL26
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 87175
gene: KLHL26
product: kelch like family member 26, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_030966700.1
SIO_010081: KLHL26
subclass of: SO_0000673
so part of: KLHL26
location: complement(join(591394..594171,609376..609400))
location: region:591394-609400:-1
so has part: feature:609376-609400:-1:exon
so has part: feature:591394-594171:-1:exon

position:609400:-1
position: 609400
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:609376-609400:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:591394-594171:-1:exon

KLHL26
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 87175
gene: KLHL26
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: kelch-like protein 26 isoform X1
translation: MAESGGAEFGAERPSSMADKNSTLKCTFSAPGHSTTLLQGLASLRAQAQLLDVILTINNEVFQVHKVVLAACSDYFRAMFTGGMREASQDVIELKGVSAKGLKHIIDFAYSAEVTLDLDCIQDVLGAAVFLQMVPVVELCEEFLKSAMSVETCLNIGQMATTFSLASLKESVDAFTFRHFLQISEEEDFLHLPLERLVFFLQSNKLKSCSEIELFRAAVRWLQFDPARRASASRVLCHIRFPLMKSSELVDSVQTLDIMVEDVLCRQYLLEAFNYQILPFRQHEMQSPRTAIRSDVLSLVTFGGTPYTDNDRTVSSKVFCLPDAGGRQFRELTSMEVGSSHSCVAVLDNFVYLVGGQQLQYRSGEGAVDVSYRYDPHLNQWLRIQAMQESRIQFQLNVLRGMVYATGGRNRSGSLASVEKYCPKDNEWTYVCSLKRRTWGHAGATVGDRLYISGGYGISVEDKKALHCYDPAADQWEFKTPMNEPRVLHAMVSANSRIYALGGRMDHVDRCFDVLAVEYYVPETDQWTTVSPMRAGQSEAGCCLLEKKIYIVGGYNWHLNNVTSIVQVYNTETDEWERDLHFPESFAGIACAPVILPQVTSQR
SIO_010081: KLHL26
subclass of: SO_0000673
so part of: KLHL26
location: complement(join(592590..594171,596781..596963,609376..609422))
location: region:592590-609422:-1
so has part: feature:609376-609422:-1:exon
so has part: feature:596781-596963:-1:exon
so has part: feature:592590-594171:-1:exon

XP_030822557.1
type: Protein
SIO_000068: ncbiprotein

position:592590:-1
position: 592590
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:609422:-1
position: 609422
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:609376-609422:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:596781-596963:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:592590-594171:-1:exon

KLHL26
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 87175
gene: KLHL26
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: kelch-like protein 26 isoform X2
translation: MADKNSTLKCTFSAPGHSTTLLQGLASLRAQAQLLDVILTINNEVFQVHKVVLAACSDYFRAMFTGGMREASQDVIELKGVSAKGLKHIIDFAYSAEVTLDLDCIQDVLGAAVFLQMVPVVELCEEFLKSAMSVETCLNIGQMATTFSLASLKESVDAFTFRHFLQISEEEDFLHLPLERLVFFLQSNKLKSCSEIELFRAAVRWLQFDPARRASASRVLCHIRFPLMKSSELVDSVQTLDIMVEDVLCRQYLLEAFNYQILPFRQHEMQSPRTAIRSDVLSLVTFGGTPYTDNDRTVSSKVFCLPDAGGRQFRELTSMEVGSSHSCVAVLDNFVYLVGGQQLQYRSGEGAVDVSYRYDPHLNQWLRIQAMQESRIQFQLNVLRGMVYATGGRNRSGSLASVEKYCPKDNEWTYVCSLKRRTWGHAGATVGDRLYISGGYGISVEDKKALHCYDPAADQWEFKTPMNEPRVLHAMVSANSRIYALGGRMDHVDRCFDVLAVEYYVPETDQWTTVSPMRAGQSEAGCCLLEKKIYIVGGYNWHLNNVTSIVQVYNTETDEWERDLHFPESFAGIACAPVILPQVTSQR
SIO_010081: KLHL26
subclass of: SO_0000673
so part of: KLHL26
location: complement(join(592590..594171,596781..596962))
location: region:592590-596962:-1
so has part: feature:596781-596962:-1:exon
so has part: feature:592590-594171:-1:exon

XP_030822558.1
type: Protein
SIO_000068: ncbiprotein

position:596962:-1
position: 596962
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:596781-596962:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:592590-594171:-1:exon

KLHL26
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 87175
gene: KLHL26
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: kelch-like protein 26 isoform X3
translation: MFTGGMREASQDVIELKGVSAKGLKHIIDFAYSAEVTLDLDCIQDVLGAAVFLQMVPVVELCEEFLKSAMSVETCLNIGQMATTFSLASLKESVDAFTFRHFLQISEEEDFLHLPLERLVFFLQSNKLKSCSEIELFRAAVRWLQFDPARRASASRVLCHIRFPLMKSSELVDSVQTLDIMVEDVLCRQYLLEAFNYQILPFRQHEMQSPRTAIRSDVLSLVTFGGTPYTDNDRTVSSKVFCLPDAGGRQFRELTSMEVGSSHSCVAVLDNFVYLVGGQQLQYRSGEGAVDVSYRYDPHLNQWLRIQAMQESRIQFQLNVLRGMVYATGGRNRSGSLASVEKYCPKDNEWTYVCSLKRRTWGHAGATVGDRLYISGGYGISVEDKKALHCYDPAADQWEFKTPMNEPRVLHAMVSANSRIYALGGRMDHVDRCFDVLAVEYYVPETDQWTTVSPMRAGQSEAGCCLLEKKIYIVGGYNWHLNNVTSIVQVYNTETDEWERDLHFPESFAGIACAPVILPQVTSQR
SIO_010081: KLHL26
subclass of: SO_0000673
so part of: KLHL26
location: complement(592590..594167)
location: region:592590-594167:-1
so has part: feature:592590-594167:-1:exon

XP_030822560.1
type: Protein
SIO_000068: ncbiprotein

position:594167:-1
position: 594167
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:592590-594167:-1:exon

TMEM59L
type: Gene
subclass of: SO_0000704
RO_0002162: 87175
gene: TMEM59L
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(617917..624296)
location: region:617917-624296:-1
so has part: feature:617917-624296:-1:exon
subclass of: SO_0000010

115914278
type: Gene
SIO_000068: ncbigene

position:617917:-1
position: 617917
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:624296:-1
position: 624296
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:617917-624296:-1:exon

TMEM59L
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 87175
gene: TMEM59L
product: transmembrane protein 59 like, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 ESTs, 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XM_030966715.1
SIO_010081: TMEM59L
subclass of: SO_0000673
so part of: TMEM59L
location: complement(join(617917..619611,620189..620306,620427..620538,620831..620936,621029..621175,622705..622802,623028..623133,624132..624296))
location: region:617917-624296:-1
so has part: feature:624132-624296:-1:exon
so has part: feature:623028-623133:-1:exon
so has part: feature:622705-622802:-1:exon
so has part: feature:621029-621175:-1:exon
so has part: feature:620831-620936:-1:exon
so has part: feature:620427-620538:-1:exon
so has part: feature:620189-620306:-1:exon
so has part: feature:617917-619611:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:624132-624296:-1:exon

position:624132:-1
position: 624132
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:623028-623133:-1:exon

position:623028:-1
position: 623028
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:623133:-1
position: 623133
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:622705-622802:-1:exon

position:622705:-1
position: 622705
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:622802:-1
position: 622802
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:621029-621175:-1:exon

position:621029:-1
position: 621029
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:621175:-1
position: 621175
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:620831-620936:-1:exon

position:620831:-1
position: 620831
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:620936:-1
position: 620936
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:620427-620538:-1:exon

position:620427:-1
position: 620427
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:620538:-1
position: 620538
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:620189-620306:-1:exon

position:620189:-1
position: 620189
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:620306:-1
position: 620306
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:617917-619611:-1:exon

position:619611:-1
position: 619611
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

TMEM59L
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 87175
gene: TMEM59L
product: transmembrane protein 59 like, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 ESTs, 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_030966714.1
SIO_010081: TMEM59L
subclass of: SO_0000673
so part of: TMEM59L
location: complement(join(617917..619611,620189..620330,620427..620538,620831..620936,621029..621175,622705..622802,623028..623133,624132..624296))
location: region:617917-624296:-1
so has part: feature:624132-624296:-1:exon
so has part: feature:623028-623133:-1:exon
so has part: feature:622705-622802:-1:exon
so has part: feature:621029-621175:-1:exon
so has part: feature:620831-620936:-1:exon
so has part: feature:620427-620538:-1:exon
so has part: feature:620189-620330:-1:exon
so has part: feature:617917-619611:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:624132-624296:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:623028-623133:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:622705-622802:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:621029-621175:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:620831-620936:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:620427-620538:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:620189-620330:-1:exon

position:620330:-1
position: 620330
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:617917-619611:-1:exon

TMEM59L
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 87175
gene: TMEM59L
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: transmembrane protein 59-like isoform X2
translation: MAAPARRPRALLALGLALLTAAAAAATDPFSPQLGDTGGCRGQCGRSLQRRAAADAVLNACYRGCRLFSICHFVDASAELNTTRAECEAACAEAYGNAEEQFGCVTGCRKQLPEVEESRKEKSLELKLPSFSMLDLVSTFCNDIVSSAQSFISSTWTFYLQADDGKVVVFQSQPEMEFPAAEALEIQPAQPGSGSGSSPGVPQPHTGPRAKGDNPPVKEPRGKAKARPPEPPQQEHDFLGCMSKRSGLPRWILAACLFLSIMVMLWLSCASLVTAPEQHVKTQPLSINGDKEYLEDLDGPGAFPLPPVITVTLCPAPGGEDAGPLPLKVDLDKTIL
SIO_010081: TMEM59L
subclass of: SO_0000673
so part of: TMEM59L
location: complement(join(619450..619611,620189..620306,620427..620538,620831..620936,621029..621175,622705..622802,623028..623133,624132..624293))
location: region:619450-624293:-1
so has part: feature:624132-624293:-1:exon
so has part: feature:623028-623133:-1:exon
so has part: feature:622705-622802:-1:exon
so has part: feature:621029-621175:-1:exon
so has part: feature:620831-620936:-1:exon
so has part: feature:620427-620538:-1:exon
so has part: feature:620189-620306:-1:exon
so has part: feature:619450-619611:-1:exon

XP_030822575.1
type: Protein
SIO_000068: ncbiprotein

position:619450:-1
position: 619450
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:624293:-1
position: 624293
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:624132-624293:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:623028-623133:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:622705-622802:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:621029-621175:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:620831-620936:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:620427-620538:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:620189-620306:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:619450-619611:-1:exon

TMEM59L
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 87175
gene: TMEM59L
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: transmembrane protein 59-like isoform X1
translation: MAAPARRPRALLALGLALLTAAAAAATDPFSPQLGDTGGCRGQCGRSLQRRAAADAVLNACYRGCRLFSICHFVDASAELNTTRAECEAACAEAYGNAEEQFGCVTGCRKQLPEVEESRKEKSLELKLPSFSMLDLVSTFCNDIVSSAQSFISSTWTFYLQADDGKVVVFQSQPEMEFPAAEALEIQPAQPGSGSGSSPGVPQPHTGPRAKGDNPPVKEPRGKAKARPPEPPQQEHDFLGCMSKWGVVGCYRRSGLPRWILAACLFLSIMVMLWLSCASLVTAPEQHVKTQPLSINGDKEYLEDLDGPGAFPLPPVITVTLCPAPGGEDAGPLPLKVDLDKTIL
SIO_010081: TMEM59L
subclass of: SO_0000673
so part of: TMEM59L
location: complement(join(619450..619611,620189..620330,620427..620538,620831..620936,621029..621175,622705..622802,623028..623133,624132..624293))
location: region:619450-624293:-1
so has part: feature:624132-624293:-1:exon
so has part: feature:623028-623133:-1:exon
so has part: feature:622705-622802:-1:exon
so has part: feature:621029-621175:-1:exon
so has part: feature:620831-620936:-1:exon
so has part: feature:620427-620538:-1:exon
so has part: feature:620189-620330:-1:exon
so has part: feature:619450-619611:-1:exon

XP_030822574.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:624132-624293:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:623028-623133:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:622705-622802:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:621029-621175:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:620831-620936:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:620427-620538:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:620189-620330:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:619450-619611:-1:exon

CRLF1
type: Gene
subclass of: SO_0000704
RO_0002162: 87175
gene: CRLF1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 628466..636265
location: region:628466-636265:1
so has part: feature:628466-636265:1:exon
subclass of: SO_0000010

115914365
type: Gene
SIO_000068: ncbigene

position:628466:1
position: 628466
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:636265:1
position: 636265
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:628466-636265:1:exon

CRLF1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 87175
gene: CRLF1
product: cytokine receptor like factor 1, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 8 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XM_030966852.1
SIO_010081: CRLF1
subclass of: SO_0000673
so part of: CRLF1
location: join(628466..628618,632858..633136,634370..634499,634790..634959,635188..635345,635418..635586,635841..636019,636147..636265)
location: region:628466-636265:1
so has part: feature:628466-628618:1:exon
so has part: feature:632858-633136:1:exon
so has part: feature:634370-634499:1:exon
so has part: feature:634790-634959:1:exon
so has part: feature:635188-635345:1:exon
so has part: feature:635418-635586:1:exon
so has part: feature:635841-636019:1:exon
so has part: feature:636147-636265:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:628466-628618:1:exon

position:628618:1
position: 628618
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:632858-633136:1:exon

position:632858:1
position: 632858
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:633136:1
position: 633136
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:634370-634499:1:exon

position:634370:1
position: 634370
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:634499:1
position: 634499
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:634790-634959:1:exon

position:634790:1
position: 634790
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:634959:1
position: 634959
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:635188-635345:1:exon

position:635188:1
position: 635188
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:635345:1
position: 635345
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:635418-635586:1:exon

position:635418:1
position: 635418
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:635586:1
position: 635586
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:635841-636019:1:exon

position:635841:1
position: 635841
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:636019:1
position: 636019
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:636147-636265:1:exon

position:636147:1
position: 636147
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

CRLF1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 87175
gene: CRLF1
product: cytokine receptor like factor 1, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XM_030966853.1
SIO_010081: CRLF1
subclass of: SO_0000673
so part of: CRLF1
location: join(628466..628618,632858..633136,634370..634499,634790..634959,635188..635345,635418..635586,635841..636023,636147..636259)
location: region:628466-636259:1
so has part: feature:628466-628618:1:exon
so has part: feature:632858-633136:1:exon
so has part: feature:634370-634499:1:exon
so has part: feature:634790-634959:1:exon
so has part: feature:635188-635345:1:exon
so has part: feature:635418-635586:1:exon
so has part: feature:635841-636023:1:exon
so has part: feature:636147-636259:1:exon

position:636259:1
position: 636259
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:628466-628618:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:632858-633136:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:634370-634499:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:634790-634959:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:635188-635345:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:635418-635586:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:635841-636023:1:exon

position:636023:1
position: 636023
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:636147-636259:1:exon

CRLF1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 87175
gene: CRLF1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: cytokine receptor-like factor 1 isoform X1
translation: MPPPPLLPMLPLLLLLLLPRLPRADPLSYPAVISPQDPTLLIGSSLVATCTVSPDFPLKAEDLYWTLNGRRLPAASYAALGPSTLSVALARLNGSRQQSGDNLVCHSRDGGILAGSCLYVGLPPEKPVNITCWSKNMKDLTCKWAPGTEGETFLHTNYTLKYKRRWYGQDNTCQEYHTAGTYSCHIPKDLALFTPYEIWVEASNRLGVAVSDVVMLDILDVVTTDPPSDVHVSRVGDLEDQLSVRWSSPPALKDFLFQAKYQIQYRVEDSSEWKVVDDVGNQTSCRLAGLRPGTVYFVQVRCNPFSIYGSKKAGIWSDWSNPTAASTPRSERVAGGCDPKGGEQNTTLRRELKQFFGWVKKHAYGCSNLGIKLYDQWRVWLQKSHKTRNQVLPGDKL
SIO_010081: CRLF1
subclass of: SO_0000673
so part of: CRLF1
location: join(628534..628618,632858..633136,634370..634499,634790..634959,635188..635345,635418..635586,635841..636019,636147..636170)
location: region:628534-636170:1
so has part: feature:628534-628618:1:exon
so has part: feature:632858-633136:1:exon
so has part: feature:634370-634499:1:exon
so has part: feature:634790-634959:1:exon
so has part: feature:635188-635345:1:exon
so has part: feature:635418-635586:1:exon
so has part: feature:635841-636019:1:exon
so has part: feature:636147-636170:1:exon

XP_030822712.1
type: Protein
SIO_000068: ncbiprotein

position:628534:1
position: 628534
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:636170:1
position: 636170
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:628534-628618:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:632858-633136:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:634370-634499:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:634790-634959:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:635188-635345:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:635418-635586:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:635841-636019:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:636147-636170:1:exon

CRLF1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 87175
gene: CRLF1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: cytokine receptor-like factor 1 isoform X2
translation: MPPPPLLPMLPLLLLLLLPRLPRADPLSYPAVISPQDPTLLIGSSLVATCTVSPDFPLKAEDLYWTLNGRRLPAASYAALGPSTLSVALARLNGSRQQSGDNLVCHSRDGGILAGSCLYVGLPPEKPVNITCWSKNMKDLTCKWAPGTEGETFLHTNYTLKYKRRWYGQDNTCQEYHTAGTYSCHIPKDLALFTPYEIWVEASNRLGVAVSDVVMLDILDVVTTDPPSDVHVSRVGDLEDQLSVRWSSPPALKDFLFQAKYQIQYRVEDSSEWKVVDDVGNQTSCRLAGLRPGTVYFVQVRCNPFSIYGSKKAGIWSDWSNPTAASTPRSERVAGGCDPKGGEQNTTLRRELKQFFGWVKKHAYGCSNLGIKLYDQWRVWLQKSHKTRNQVGSSRR
SIO_010081: CRLF1
subclass of: SO_0000673
so part of: CRLF1
location: join(628534..628618,632858..633136,634370..634499,634790..634959,635188..635345,635418..635586,635841..636023,636147..636163)
location: region:628534-636163:1
so has part: feature:628534-628618:1:exon
so has part: feature:632858-633136:1:exon
so has part: feature:634370-634499:1:exon
so has part: feature:634790-634959:1:exon
so has part: feature:635188-635345:1:exon
so has part: feature:635418-635586:1:exon
so has part: feature:635841-636023:1:exon
so has part: feature:636147-636163:1:exon

XP_030822713.1
type: Protein
SIO_000068: ncbiprotein

position:636163:1
position: 636163
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:628534-628618:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:632858-633136:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:634370-634499:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:634790-634959:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:635188-635345:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:635418-635586:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:635841-636023:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:636147-636163:1:exon

REX1BD
type: Gene
subclass of: SO_0000704
RO_0002162: 87175
gene: REX1BD
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(633831..639461)
location: region:633831-639461:-1
so has part: feature:633831-639461:-1:exon
subclass of: SO_0000010

115914367
type: Gene
SIO_000068: ncbigene

position:633831:-1
position: 633831
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:639461:-1
position: 639461
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:633831-639461:-1:exon

REX1BD
type: Miscellaneous RNA
subclass of: SO_0000673
RO_0002162: 87175
gene: REX1BD
product: required for excision 1-B domain containing, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XR_004061421.1
SIO_010081: REX1BD
so part of: REX1BD
location: complement(join(633831..635989,637277..637440,637816..637904,637981..638185,638672..638754,639434..639461))
location: region:633831-639461:-1
so has part: feature:639434-639461:-1:exon
so has part: feature:638672-638754:-1:exon
so has part: feature:637981-638185:-1:exon
so has part: feature:637816-637904:-1:exon
so has part: feature:637277-637440:-1:exon
so has part: feature:633831-635989:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:639434-639461:-1:exon

position:639434:-1
position: 639434
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:638672-638754:-1:exon

position:638672:-1
position: 638672
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:638754:-1
position: 638754
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:637981-638185:-1:exon

position:637981:-1
position: 637981
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:638185:-1
position: 638185
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:637816-637904:-1:exon

position:637816:-1
position: 637816
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:637904:-1
position: 637904
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:637277-637440:-1:exon

position:637277:-1
position: 637277
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:637440:-1
position: 637440
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:633831-635989:-1:exon

position:635989:-1
position: 635989
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

REX1BD
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 87175
gene: REX1BD
product: required for excision 1-B domain containing, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
transcript id: XM_030966854.1
SIO_010081: REX1BD
subclass of: SO_0000673
so part of: REX1BD
location: complement(join(636906..637440,637816..637904,637981..638185,638672..638754,639434..639461))
location: region:636906-639461:-1
so has part: feature:639434-639461:-1:exon
so has part: feature:638672-638754:-1:exon
so has part: feature:637981-638185:-1:exon
so has part: feature:637816-637904:-1:exon
so has part: feature:636906-637440:-1:exon

position:636906:-1
position: 636906
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:639434-639461:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:638672-638754:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:637981-638185:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:637816-637904:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:636906-637440:-1:exon

REX1BD
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 87175
gene: REX1BD
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: required for excision 1-B domain-containing protein
translation: MTGEAVRELLQRLRELQSERVETYRLFEEGHRAYLSSAPHYDFPRYRQLVHEVTVAFSGISREVLAIAGRLRDQLGRPELAQHLARLQEREQEKLQLTAQLQLARQQAQDQPEVDAHQQEVQELKHKLIKTIEAISEILQDLKYDSEEVE
SIO_010081: REX1BD
subclass of: SO_0000673
so part of: REX1BD
location: complement(join(637368..637440,637816..637904,637981..638185,638672..638754,639434..639436))
location: region:637368-639436:-1
so has part: feature:639434-639436:-1:exon
so has part: feature:638672-638754:-1:exon
so has part: feature:637981-638185:-1:exon
so has part: feature:637816-637904:-1:exon
so has part: feature:637368-637440:-1:exon

XP_030822714.1
type: Protein
SIO_000068: ncbiprotein

position:637368:-1
position: 637368
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:639436:-1
position: 639436
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:639434-639436:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:638672-638754:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:637981-638185:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:637816-637904:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:637368-637440:-1:exon

UBA52
type: Gene
subclass of: SO_0000704
RO_0002162: 87175
gene: UBA52
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(640081..641243)
location: region:640081-641243:-1
so has part: feature:640081-641243:-1:exon
subclass of: SO_0000010

115914276
type: Gene
SIO_000068: ncbigene

position:640081:-1
position: 640081
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:641243:-1
position: 641243
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:640081-641243:-1:exon

UBA52
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 87175
gene: UBA52
product: ubiquitin A-52 residue ribosomal protein fusion product 1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 mRNAs, 26 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
transcript id: XM_030966712.1
SIO_010081: UBA52
subclass of: SO_0000673
so part of: UBA52
location: complement(join(640081..640221,640314..640416,640508..640594,640684..640802,641178..641243))
location: region:640081-641243:-1
so has part: feature:641178-641243:-1:exon
so has part: feature:640684-640802:-1:exon
so has part: feature:640508-640594:-1:exon
so has part: feature:640314-640416:-1:exon
so has part: feature:640081-640221:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:641178-641243:-1:exon

position:641178:-1
position: 641178
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:640684-640802:-1:exon

position:640684:-1
position: 640684
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:640802:-1
position: 640802
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:640508-640594:-1:exon

position:640508:-1
position: 640508
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:640594:-1
position: 640594
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:640314-640416:-1:exon

position:640314:-1
position: 640314
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:640416:-1
position: 640416
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:640081-640221:-1:exon

position:640221:-1
position: 640221
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

UBA52
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 87175
gene: UBA52
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: ubiquitin-60S ribosomal protein L40
translation: MQIFVKTLTGKTITLEVEPNDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGIIEPSLRQLAQKYNCDKMICRKCYARLHPRAVNCRKKKCGHTNNLRPKKKVK
SIO_010081: UBA52
subclass of: SO_0000673
so part of: UBA52
location: complement(join(640128..640221,640314..640416,640508..640594,640684..640786))
location: region:640128-640786:-1
so has part: feature:640684-640786:-1:exon
so has part: feature:640508-640594:-1:exon
so has part: feature:640314-640416:-1:exon
so has part: feature:640128-640221:-1:exon

XP_030822572.1
type: Protein
SIO_000068: ncbiprotein

position:640128:-1
position: 640128
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:640786:-1
position: 640786
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:640684-640786:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:640508-640594:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:640314-640416:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:640128-640221:-1:exon

KXD1
type: Gene
subclass of: SO_0000704
RO_0002162: 87175
gene: KXD1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(642201..645240)
location: region:642201-645240:-1
so has part: feature:642201-645240:-1:exon
subclass of: SO_0000010

115914370
type: Gene
SIO_000068: ncbigene

position:642201:-1
position: 642201
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:645240:-1
position: 645240
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:642201-645240:-1:exon

KXD1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 87175
gene: KXD1
product: KxDL motif containing 1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 8 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
transcript id: XM_030966858.1
SIO_010081: KXD1
subclass of: SO_0000673
so part of: KXD1
location: complement(join(642201..642671,643943..643989,644353..644505,644602..644702,644988..645240))
location: region:642201-645240:-1
so has part: feature:644988-645240:-1:exon
so has part: feature:644602-644702:-1:exon
so has part: feature:644353-644505:-1:exon
so has part: feature:643943-643989:-1:exon
so has part: feature:642201-642671:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:644988-645240:-1:exon

position:644988:-1
position: 644988
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:644602-644702:-1:exon

position:644602:-1
position: 644602
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:644702:-1
position: 644702
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:644353-644505:-1:exon

position:644353:-1
position: 644353
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:644505:-1
position: 644505
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:643943-643989:-1:exon

position:643943:-1
position: 643943
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:643989:-1
position: 643989
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:642201-642671:-1:exon

position:642671:-1
position: 642671
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

KXD1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 87175
gene: KXD1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: kxDL motif-containing protein 1
translation: MEPSASQVFCGRVLGMVNAEDVNAIILAQKNMLDRFEKTNEMLLNFNNLSSVRMQQMSERFVHHTRTLVEMKKDLDSIFRRIRTLKGKLAKQYPEAFSNIHESPILEDDDDFDPVPKSTTTTIATSEQSTESCDSSPGLISPTTSQEFEDLSQGHYEGPALNGQSLTDEDTANLD
SIO_010081: KXD1
subclass of: SO_0000673
so part of: KXD1
location: complement(join(642439..642671,643943..643989,644353..644505,644602..644696))
location: region:642439-644696:-1
so has part: feature:644602-644696:-1:exon
so has part: feature:644353-644505:-1:exon
so has part: feature:643943-643989:-1:exon
so has part: feature:642439-642671:-1:exon

XP_030822718.1
type: Protein
SIO_000068: ncbiprotein

position:642439:-1
position: 642439
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:644696:-1
position: 644696
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:644602-644696:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:644353-644505:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:643943-643989:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:642439-642671:-1:exon

FKBP8
type: Gene
subclass of: SO_0000704
RO_0002162: 87175
gene: FKBP8
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 645118..652538
location: region:645118-652538:1
so has part: feature:645118-652538:1:exon
subclass of: SO_0000010

115914369
type: Gene
SIO_000068: ncbigene

position:645118:1
position: 645118
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:652538:1
position: 652538
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:645118-652538:1:exon

FKBP8
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 87175
gene: FKBP8
product: FKBP prolyl isomerase 8
exception: unclassified transcription discrepancy
note: The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: inserted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 ESTs, 7 Proteins, and 94% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XM_030966857.1
SIO_010081: FKBP8
subclass of: SO_0000673
so part of: FKBP8
location: join(645118..645193,645673..645963,646110..646279,646506..646594,647742..647958,648032..648204,648288..648365,651174..651311,651707..652538)
location: region:645118-652538:1
so has part: feature:645118-645193:1:exon
so has part: feature:645673-645963:1:exon
so has part: feature:646110-646279:1:exon
so has part: feature:646506-646594:1:exon
so has part: feature:647742-647958:1:exon
so has part: feature:648032-648204:1:exon
so has part: feature:648288-648365:1:exon
so has part: feature:651174-651311:1:exon
so has part: feature:651707-652538:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:645118-645193:1:exon

position:645193:1
position: 645193
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:645673-645963:1:exon

position:645673:1
position: 645673
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:645963:1
position: 645963
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:646110-646279:1:exon

position:646110:1
position: 646110
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:646279:1
position: 646279
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:646506-646594:1:exon

position:646506:1
position: 646506
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:646594:1
position: 646594
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:647742-647958:1:exon

position:647742:1
position: 647742
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:647958:1
position: 647958
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:648032-648204:1:exon

position:648032:1
position: 648032
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:648204:1
position: 648204
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:648288-648365:1:exon

position:648288:1
position: 648288
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:648365:1
position: 648365
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:651174-651311:1:exon

position:651174:1
position: 651174
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:651311:1
position: 651311
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:651707-652538:1:exon

position:651707:1
position: 651707
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

FKBP8
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 87175
gene: FKBP8
exception: unclassified translation discrepancy
note: The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: inserted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: LOW QUALITY PROTEIN: peptidyl-prolyl cis-trans isomerase FKBP8
translation: MASSGEEPSNGSPGRAGTGGSEAAAADAAQLDTAEDFEVLEEEGEEDEDDLSELPPLEDVGRPPAPPREDAQPPAPGAGDAAGDAEEWLDVLGNGLLRKKTLVAGQGVESRPQKGQDVTIRLKAMLEDGAVVEQDPALTFTLGDCDVLQALDLCVQLLEMGETALIVSDAKYCYGAQGRSPDVPPNASLTLEVELLAARDAPDLELLSGKEKIQLANRXRERGNFFYQQADYVLAVNSYDIALRILGSSSKVDFSPDEEAELLDVKVKCLNNLAASQLKLDHFKAALKSCNLVLEHQPGNIKALFRKGKVLAQQGEYREAIPILKAALKLEPSNKTIHAELSKLVKKHADQRNVETEMYRKMLGNPSTASTARKCKDKLPWSIPWKWLFGATAIALGGVALSVVIAARN
SIO_010081: FKBP8
subclass of: SO_0000673
so part of: FKBP8
location: join(645687..645963,646110..646279,646506..646594,647742..647958,648032..648204,648288..648365,651174..651311,651707..651793)
location: region:645687-651793:1
so has part: feature:645687-645963:1:exon
so has part: feature:646110-646279:1:exon
so has part: feature:646506-646594:1:exon
so has part: feature:647742-647958:1:exon
so has part: feature:648032-648204:1:exon
so has part: feature:648288-648365:1:exon
so has part: feature:651174-651311:1:exon
so has part: feature:651707-651793:1:exon

XP_030822717.1
type: Protein
SIO_000068: ncbiprotein

position:645687:1
position: 645687
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:651793:1
position: 651793
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:645687-645963:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:646110-646279:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:646506-646594:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:647742-647958:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:648032-648204:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:648288-648365:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:651174-651311:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:651707-651793:1:exon

ELL
type: Gene
subclass of: SO_0000704
RO_0002162: 87175
gene: ELL
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 653477..705909
location: region:653477-705909:1
so has part: feature:653477-705909:1:exon
subclass of: SO_0000010

115914222
type: Gene
SIO_000068: ncbigene

position:653477:1
position: 653477
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:705909:1
position: 705909
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:653477-705909:1:exon

ELL
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 87175
gene: ELL
product: elongation factor for RNA polymerase II
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 5 ESTs, 8 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
transcript id: XM_030966621.1
SIO_010081: ELL
subclass of: SO_0000673
so part of: ELL
location: join(653477..653633,677685..677732,682552..682673,682970..683133,685967..686220,689229..689353,692289..692385,695082..695580,698026..698092,700770..700941,701795..701839,702806..705909)
location: region:653477-705909:1
so has part: feature:653477-653633:1:exon
so has part: feature:677685-677732:1:exon
so has part: feature:682552-682673:1:exon
so has part: feature:682970-683133:1:exon
so has part: feature:685967-686220:1:exon
so has part: feature:689229-689353:1:exon
so has part: feature:692289-692385:1:exon
so has part: feature:695082-695580:1:exon
so has part: feature:698026-698092:1:exon
so has part: feature:700770-700941:1:exon
so has part: feature:701795-701839:1:exon
so has part: feature:702806-705909:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:653477-653633:1:exon

position:653633:1
position: 653633
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:677685-677732:1:exon

position:677685:1
position: 677685
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:677732:1
position: 677732
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:682552-682673:1:exon

position:682552:1
position: 682552
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:682673:1
position: 682673
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:682970-683133:1:exon

position:682970:1
position: 682970
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:683133:1
position: 683133
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:685967-686220:1:exon

position:685967:1
position: 685967
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:686220:1
position: 686220
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:689229-689353:1:exon

position:689229:1
position: 689229
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:689353:1
position: 689353
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:692289-692385:1:exon

position:692289:1
position: 692289
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:692385:1
position: 692385
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:695082-695580:1:exon

position:695082:1
position: 695082
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:695580:1
position: 695580
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:698026-698092:1:exon

position:698026:1
position: 698026
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:698092:1
position: 698092
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:700770-700941:1:exon

position:700770:1
position: 700770
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:700941:1
position: 700941
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:701795-701839:1:exon

position:701795:1
position: 701795
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:701839:1
position: 701839
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:702806-705909:1:exon

position:702806:1
position: 702806
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

ELL
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 87175
gene: ELL
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: RNA polymerase II elongation factor ELL
translation: MAALQAERGYGLSCGRLGRGTRVSVFHVKLTESALRAFESYQACKDAVTSKPVIQFQGSQGHIAIPRPDRPAEVRTFTFYLSNIGKDSPQGSFDCIQQYVSSNGNIHLDCLGSIQDKITVCATDDSYQKARQSMAQAEEETRSRSAIVIKPGGRYVGKKVQVRKPAPGASDAVPSRKRPTPVNLASAIKRGNSAISQRPFKDRVVHLLALKPYKKPELILRLQKDGLSQQDKDLLDNLLQQVANLSAKDSTFTLKDCVYKEVQKDWPGYSEGDQQLLKRILVRKLCQPQNSGAFQGEAPSLSPPKDTLSSSSPPQKRPLPVEFIDPLANKKPRISHLAHRTQPTLNGKLNSSNGKDSLALPAPALPPEPVSSSSSLPALELPRPHDPLSDVSNDLTHNGRDCESSTEPPERLSHPLPTDCAQSSKHNCGSYVKSKKKSKKHKDKEKERKEKKSEEKCKEEKQNCEVIKNADLVSVAQEQVPGLNGTCTNSSVPTSTSDMPDYLLKYAAISSSEQRQSYKNDFNAEYNEYRDLHARIERITRRFTQLDAKLKQLLQGSEEYKTIHDQILQEYRKIKKTNPNYSQEKNRCEYLHNKLAHIKKLIAEYDQQQF
SIO_010081: ELL
subclass of: SO_0000673
so part of: ELL
location: join(653499..653633,677685..677732,682552..682673,682970..683133,685967..686220,689229..689353,692289..692385,695082..695580,698026..698092,700770..700941,701795..701839,702806..702910)
location: region:653499-702910:1
so has part: feature:653499-653633:1:exon
so has part: feature:677685-677732:1:exon
so has part: feature:682552-682673:1:exon
so has part: feature:682970-683133:1:exon
so has part: feature:685967-686220:1:exon
so has part: feature:689229-689353:1:exon
so has part: feature:692289-692385:1:exon
so has part: feature:695082-695580:1:exon
so has part: feature:698026-698092:1:exon
so has part: feature:700770-700941:1:exon
so has part: feature:701795-701839:1:exon
so has part: feature:702806-702910:1:exon

XP_030822481.1
type: Protein
SIO_000068: ncbiprotein

position:653499:1
position: 653499
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:702910:1
position: 702910
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:653499-653633:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:677685-677732:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:682552-682673:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:682970-683133:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:685967-686220:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:689229-689353:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:692289-692385:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:695082-695580:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:698026-698092:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:700770-700941:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:701795-701839:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:702806-702910:1:exon

ISYNA1
type: Gene
subclass of: SO_0000704
RO_0002162: 87175
gene: ISYNA1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 709623..714541
location: region:709623-714541:1
so has part: feature:709623-714541:1:exon
subclass of: SO_0000010

115914248
type: Gene
SIO_000068: ncbigene

position:709623:1
position: 709623
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:714541:1
position: 714541
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:709623-714541:1:exon

ISYNA1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 87175
gene: ISYNA1
product: inositol-3-phosphate synthase 1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 10 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
transcript id: XM_030966671.1
SIO_010081: ISYNA1
subclass of: SO_0000673
so part of: ISYNA1
location: join(709623..709886,710761..710885,710965..711126,711648..711777,711852..712045,712128..712277,712446..712661,712737..712901,712976..713089,713181..713398,714226..714541)
location: region:709623-714541:1
so has part: feature:709623-709886:1:exon
so has part: feature:710761-710885:1:exon
so has part: feature:710965-711126:1:exon
so has part: feature:711648-711777:1:exon
so has part: feature:711852-712045:1:exon
so has part: feature:712128-712277:1:exon
so has part: feature:712446-712661:1:exon
so has part: feature:712737-712901:1:exon
so has part: feature:712976-713089:1:exon
so has part: feature:713181-713398:1:exon
so has part: feature:714226-714541:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:709623-709886:1:exon

position:709886:1
position: 709886
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:710761-710885:1:exon

position:710761:1
position: 710761
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:710885:1
position: 710885
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:710965-711126:1:exon

position:710965:1
position: 710965
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:711126:1
position: 711126
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:711648-711777:1:exon

position:711648:1
position: 711648
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:711777:1
position: 711777
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:711852-712045:1:exon

position:711852:1
position: 711852
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:712045:1
position: 712045
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:712128-712277:1:exon

position:712128:1
position: 712128
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:712277:1
position: 712277
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:712446-712661:1:exon

position:712446:1
position: 712446
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:712661:1
position: 712661
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:712737-712901:1:exon

position:712737:1
position: 712737
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:712901:1
position: 712901
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:712976-713089:1:exon

position:712976:1
position: 712976
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:713089:1
position: 713089
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:713181-713398:1:exon

position:713181:1
position: 713181
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:713398:1
position: 713398
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:714226-714541:1:exon

position:714226:1
position: 714226
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

ISYNA1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 87175
gene: ISYNA1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: inositol-3-phosphate synthase 1
translation: MAEPFLVESPDVTYSKDFIEAKYTYSTVHVCKENGVTKVRPCSTRFTFRTGRQVPRLGVMLVGWGGNNGTTVTAAVLANRLGLSWMTKTGRKTANYYGSLLQASTVCLGTGPSGDVYVPFRDLLPMVHPNDIVFDGWDISSLNLAEAMRRAEVLEWPLQEQLWPHMEKMKPRPSIYIPEFIAANQEERADNVLRGPMAQQVEQIRRDIRDFKESSGVDKVIVLWTANTERFCDIVPGLNDTADNLLRAIERGLEVSPSTLFAVASILEGCAYINGSPQNTFVPGAVELAAQRRVFIGGDDFKSGQTKLKSVLVDFLVGAGLKTKSIVSYNHLGNNDGKNLSAPQQFRSKEISKSNVVDDTVQANPVLYGPQDKPDHCVVIKYVPYVGDSKRALDEYTSEIMMGGTNTIVIHNTCEDSLLASPIILDLAILTELCQRISFCTEADPEFQGFHSVLSILAFLCKAPLVPEGSPVVNALFRQRSCIENILRACLGLPPQNHMLLEHKMQRPSPPKRSCPGGAACPLVPKKSPPVPTQLNGHPPCAPRAPRVPLHIDGAD
SIO_010081: ISYNA1
subclass of: SO_0000673
so part of: ISYNA1
location: join(710772..710885,710965..711126,711648..711777,711852..712045,712128..712277,712446..712661,712737..712901,712976..713089,713181..713398,714226..714433)
location: region:710772-714433:1
so has part: feature:710772-710885:1:exon
so has part: feature:710965-711126:1:exon
so has part: feature:711648-711777:1:exon
so has part: feature:711852-712045:1:exon
so has part: feature:712128-712277:1:exon
so has part: feature:712446-712661:1:exon
so has part: feature:712737-712901:1:exon
so has part: feature:712976-713089:1:exon
so has part: feature:713181-713398:1:exon
so has part: feature:714226-714433:1:exon

XP_030822531.1
type: Protein
SIO_000068: ncbiprotein

position:710772:1
position: 710772
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:714433:1
position: 714433
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:710772-710885:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:710965-711126:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:711648-711777:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:711852-712045:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:712128-712277:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:712446-712661:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:712737-712901:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:712976-713089:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:713181-713398:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:714226-714433:1:exon

SSBP4
type: Gene
subclass of: SO_0000704
RO_0002162: 87175
gene: SSBP4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(716631..730174)
location: region:716631-730174:-1
so has part: feature:716631-730174:-1:exon
subclass of: SO_0000010

115914214
type: Gene
SIO_000068: ncbigene

position:716631:-1
position: 716631
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:730174:-1
position: 730174
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:716631-730174:-1:exon

SSBP4
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 87175
gene: SSBP4
product: single stranded DNA binding protein 4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, 21 Proteins, and 95% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
transcript id: XM_030966611.1
SIO_010081: SSBP4
subclass of: SO_0000673
so part of: SSBP4
location: complement(join(716631..716751,717136..717237,718403..718431,720657..720735,720841..720911,722139..722193,722296..722331,722437..722482,722578..722645,723566..723636,723742..723811,723930..723989,724765..724854,727421..727505,728277..728338,728443..728515,729989..730174))
location: region:716631-730174:-1
so has part: feature:729989-730174:-1:exon
so has part: feature:728443-728515:-1:exon
so has part: feature:728277-728338:-1:exon
so has part: feature:727421-727505:-1:exon
so has part: feature:724765-724854:-1:exon
so has part: feature:723930-723989:-1:exon
so has part: feature:723742-723811:-1:exon
so has part: feature:723566-723636:-1:exon
so has part: feature:722578-722645:-1:exon
so has part: feature:722437-722482:-1:exon
so has part: feature:722296-722331:-1:exon
so has part: feature:722139-722193:-1:exon
so has part: feature:720841-720911:-1:exon
so has part: feature:720657-720735:-1:exon
so has part: feature:718403-718431:-1:exon
so has part: feature:717136-717237:-1:exon
so has part: feature:716631-716751:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:729989-730174:-1:exon

position:729989:-1
position: 729989
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:728443-728515:-1:exon

position:728443:-1
position: 728443
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:728515:-1
position: 728515
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:728277-728338:-1:exon

position:728277:-1
position: 728277
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:728338:-1
position: 728338
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:727421-727505:-1:exon

position:727421:-1
position: 727421
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:727505:-1
position: 727505
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:724765-724854:-1:exon

position:724765:-1
position: 724765
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:724854:-1
position: 724854
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:723930-723989:-1:exon

position:723930:-1
position: 723930
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:723989:-1
position: 723989
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:723742-723811:-1:exon

position:723742:-1
position: 723742
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:723811:-1
position: 723811
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:723566-723636:-1:exon

position:723566:-1
position: 723566
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:723636:-1
position: 723636
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:722578-722645:-1:exon

position:722578:-1
position: 722578
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:722645:-1
position: 722645
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:722437-722482:-1:exon

position:722437:-1
position: 722437
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:722482:-1
position: 722482
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:722296-722331:-1:exon

position:722296:-1
position: 722296
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:722331:-1
position: 722331
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:722139-722193:-1:exon

position:722139:-1
position: 722139
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:722193:-1
position: 722193
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:720841-720911:-1:exon

position:720841:-1
position: 720841
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:720911:-1
position: 720911
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:720657-720735:-1:exon

position:720657:-1
position: 720657
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:720735:-1
position: 720735
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:718403-718431:-1:exon

position:718403:-1
position: 718403
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:718431:-1
position: 718431
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:717136-717237:-1:exon

position:717136:-1
position: 717136
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:717237:-1
position: 717237
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:716631-716751:-1:exon

position:716751:-1
position: 716751
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

SSBP4
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 87175
gene: SSBP4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: single-stranded DNA-binding protein 4
translation: MYAKGKGSGVPSDGQAREKLALYVYEYLLHVGAQKSAQTFLSEIRWEKNITLGEPPGFLHSWWCVFWDLYCAAPDRRETCEHSSEAKAFHDYSAAAAPSPVMGNLPPGDGMAGGPVPPAFFQPFMSPRYPGGPRPPLRMPNQPPVGVPGSQPLLPNAMDPAARAQGHPGMGGPMQRMNPPRGMAGMGPQSYGSGMRPPPSSLAGPGMPTMNMGPGGRGPWPNPNANSIAYSSSSPGNYVGPPGGGGPPGTPILPSPGDSTNSSENMYTMMNPMGPAGSRPNFPMGPGAEGPLGGMSAMEPHHMNGSLGSGDMDGLPKSSPSNLGALSNPPGTPRDDAELSSNFLNPFQSDSYSPSMTMSV
SIO_010081: SSBP4
subclass of: SO_0000673
so part of: SSBP4
location: complement(join(716722..716751,717136..717237,718403..718431,720657..720735,720841..720911,722139..722193,722296..722331,722437..722482,722578..722645,723566..723636,723742..723811,723930..723989,724765..724854,727421..727505,728277..728338,728443..728515,729989..730044))
location: region:716722-730044:-1
so has part: feature:729989-730044:-1:exon
so has part: feature:728443-728515:-1:exon
so has part: feature:728277-728338:-1:exon
so has part: feature:727421-727505:-1:exon
so has part: feature:724765-724854:-1:exon
so has part: feature:723930-723989:-1:exon
so has part: feature:723742-723811:-1:exon
so has part: feature:723566-723636:-1:exon
so has part: feature:722578-722645:-1:exon
so has part: feature:722437-722482:-1:exon
so has part: feature:722296-722331:-1:exon
so has part: feature:722139-722193:-1:exon
so has part: feature:720841-720911:-1:exon
so has part: feature:720657-720735:-1:exon
so has part: feature:718403-718431:-1:exon
so has part: feature:717136-717237:-1:exon
so has part: feature:716722-716751:-1:exon

XP_030822471.1
type: Protein
SIO_000068: ncbiprotein

position:716722:-1
position: 716722
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:730044:-1
position: 730044
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:729989-730044:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:728443-728515:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:728277-728338:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:727421-727505:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:724765-724854:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:723930-723989:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:723742-723811:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:723566-723636:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:722578-722645:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:722437-722482:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:722296-722331:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:722139-722193:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:720841-720911:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:720657-720735:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:718403-718431:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:717136-717237:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:716722-716751:-1:exon

LRRC25
type: Gene
subclass of: SO_0000704
RO_0002162: 87175
gene: LRRC25
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 731110..733917
location: region:731110-733917:1
so has part: feature:731110-733917:1:exon
subclass of: SO_0000010

115914331
type: Gene
SIO_000068: ncbigene

position:731110:1
position: 731110
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:733917:1
position: 733917
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:731110-733917:1:exon

LRRC25
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 87175
gene: LRRC25
product: leucine rich repeat containing 25
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_030966807.1
SIO_010081: LRRC25
subclass of: SO_0000673
so part of: LRRC25
location: join(731110..731183,731887..732724,733242..733917)
location: region:731110-733917:1
so has part: feature:731110-731183:1:exon
so has part: feature:731887-732724:1:exon
so has part: feature:733242-733917:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:731110-731183:1:exon

position:731183:1
position: 731183
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:731887-732724:1:exon

position:731887:1
position: 731887
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:732724:1
position: 732724
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:733242-733917:1:exon

position:733242:1
position: 733242
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LRRC25
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 87175
gene: LRRC25
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: leucine-rich repeat-containing protein 25
translation: MGVPAARLLLLLLLLPVTPILLVSPCFPLMLDISPELDLSNRSSGCAELDWSPFQGHRRLLLRHNGIEALSASARLGPRLEELDLAENRLRELPRGFFSNATALRSLRLEGNPLAAVPPAAFQPSLRSLSVSCRCDVLGTVLEPCARGGIRCQCLTSRGHPFNVTEFHGRECGPGAGPVAALVAGLVAAVAALVAALVAAVWYRRRRAGAAVGGGGRGKQDRAGSLRQPRYISRDTASADVTDGPDYENVFVSPRTAPAAGLALAWQEPRYSPQVPLHEDYFLESAADPGDQPIYANTLGPTEDIYLTPDQ
SIO_010081: LRRC25
subclass of: SO_0000673
so part of: LRRC25
location: join(731910..732724,733242..733362)
location: region:731910-733362:1
so has part: feature:731910-732724:1:exon
so has part: feature:733242-733362:1:exon

XP_030822667.1
type: Protein
SIO_000068: ncbiprotein

position:731910:1
position: 731910
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:733362:1
position: 733362
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:731910-732724:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:733242-733362:1:exon

GDF15
type: Gene
subclass of: SO_0000704
RO_0002162: 87175
gene: GDF15
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(735215..739044)
location: region:735215-739044:-1
so has part: feature:735215-739044:-1:exon
subclass of: SO_0000010

115914421
type: Gene
SIO_000068: ncbigene

position:735215:-1
position: 735215
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:739044:-1
position: 739044
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:735215-739044:-1:exon

GDF15
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 87175
gene: GDF15
product: growth differentiation factor 15
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 15% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_030966952.1
SIO_010081: GDF15
subclass of: SO_0000673
so part of: GDF15
location: complement(join(735215..736011,736696..737094,738779..738826,739011..739044))
location: region:735215-739044:-1
so has part: feature:739011-739044:-1:exon
so has part: feature:738779-738826:-1:exon
so has part: feature:736696-737094:-1:exon
so has part: feature:735215-736011:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:739011-739044:-1:exon

position:739011:-1
position: 739011
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:738779-738826:-1:exon

position:738779:-1
position: 738779
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:738826:-1
position: 738826
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:736696-737094:-1:exon

position:736696:-1
position: 736696
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:737094:-1
position: 737094
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:735215-736011:-1:exon

position:736011:-1
position: 736011
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

GDF15
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 87175
gene: GDF15
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: growth/differentiation factor 15
translation: MQRLRNPLLQAENPLQKQNFGISGFLTAPPAAARPALAEEFGANPAPKPADSCRMLLSGAMPRAALTCLRLLLLVSAADCRPHTWDQDRFQLEAVKKEILERLGMPAPPAIRQRPDPESIQRAQRLYRRKVAELAGNRSRDEEEAGEEEAVPRLHRLTPTLLPWLDIPEEHQDPQGHRDPQGHREPLGPYRYHLLLSRTADFHRQLRVVRAELKLLKQPLSPPGASVPPRVTISTVPGAGGAPQLLHSQELPRDSRSLDLTGAIQPWLAGPEPSLRLQLEFSSDISAALAASAGETLELEMQTLEEPPRAARRARGLEEECGKSDGRCCLKSLRVSFQDIGWADWVIAPNSYHMRFCEGSCPHNYKPASMHAQIQSRVHSLSKAAPPPCCVPAGYDPMVLMHLDSQGRLVSSLFEDMLVTRCHCA
SIO_010081: GDF15
subclass of: SO_0000673
so part of: GDF15
location: complement(join(735215..736011,736696..737094,738779..738826,739011..739044))
location: region:735215-739044:-1
so has part: feature:739011-739044:-1:exon
so has part: feature:738779-738826:-1:exon
so has part: feature:736696-737094:-1:exon
so has part: feature:735215-736011:-1:exon

XP_030822812.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:739011-739044:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:738779-738826:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:736696-737094:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:735215-736011:-1:exon

PGPEP1
type: Gene
subclass of: SO_0000704
RO_0002162: 87175
gene: PGPEP1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(747178..762559)
location: region:747178-762559:-1
so has part: feature:747178-762559:-1:exon
subclass of: SO_0000010

115914225
type: Gene
SIO_000068: ncbigene

position:747178:-1
position: 747178
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:762559:-1
position: 762559
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:747178-762559:-1:exon

PGPEP1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 87175
gene: PGPEP1
product: pyroglutamyl-peptidase I, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
transcript id: XM_030966626.1
SIO_010081: PGPEP1
subclass of: SO_0000673
so part of: PGPEP1
location: complement(join(747178..749961,751366..751598,752701..752817,759436..759488,762418..762559))
location: region:747178-762559:-1
so has part: feature:762418-762559:-1:exon
so has part: feature:759436-759488:-1:exon
so has part: feature:752701-752817:-1:exon
so has part: feature:751366-751598:-1:exon
so has part: feature:747178-749961:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:762418-762559:-1:exon

position:762418:-1
position: 762418
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:759436-759488:-1:exon

position:759436:-1
position: 759436
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:759488:-1
position: 759488
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:752701-752817:-1:exon

position:752701:-1
position: 752701
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:752817:-1
position: 752817
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:751366-751598:-1:exon

position:751366:-1
position: 751366
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:751598:-1
position: 751598
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:747178-749961:-1:exon

position:749961:-1
position: 749961
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

PGPEP1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 87175
gene: PGPEP1
product: pyroglutamyl-peptidase I, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 ESTs, 16 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
transcript id: XM_030966625.1
SIO_010081: PGPEP1
subclass of: SO_0000673
so part of: PGPEP1
location: complement(join(747178..749961,751366..751598,752701..752817,759436..759488,762080..762197))
location: region:747178-762197:-1
so has part: feature:762080-762197:-1:exon
so has part: feature:759436-759488:-1:exon
so has part: feature:752701-752817:-1:exon
so has part: feature:751366-751598:-1:exon
so has part: feature:747178-749961:-1:exon

position:762197:-1
position: 762197
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:762080-762197:-1:exon

position:762080:-1
position: 762080
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:759436-759488:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:752701-752817:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:751366-751598:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:747178-749961:-1:exon

PGPEP1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 87175
gene: PGPEP1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: pyroglutamyl-peptidase 1 isoform X1
translation: MEKPRRAVVVTGFGPFGEHAVNASWIAVQELEKLGLRDDVDLHVYEVPVEYQTVQRLIPALWKKHSPQLVVHVGVSGMATTVTLEKCGHNVGYKGLDNCRFCPGSQCCVEGGPECIDSIIDMDAVSSRVSALGLDVTVTISKDAGRYLCDFTYYTSLYQSHGRSAFVHVPPLGKPYSAEQLGRALQAIIEEMLDFLEHSEDKINCQHEH
SIO_010081: PGPEP1
subclass of: SO_0000673
so part of: PGPEP1
location: complement(join(749769..749961,751366..751598,752701..752817,759436..759488,762080..762113))
location: region:749769-762113:-1
so has part: feature:762080-762113:-1:exon
so has part: feature:759436-759488:-1:exon
so has part: feature:752701-752817:-1:exon
so has part: feature:751366-751598:-1:exon
so has part: feature:749769-749961:-1:exon

XP_030822485.1
type: Protein
SIO_000068: ncbiprotein

position:749769:-1
position: 749769
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:762113:-1
position: 762113
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:762080-762113:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:759436-759488:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:752701-752817:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:751366-751598:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:749769-749961:-1:exon

PGPEP1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 87175
gene: PGPEP1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: pyroglutamyl-peptidase 1 isoform X2
translation: MATTVTLEKCGHNVGYKGLDNCRFCPGSQCCVEGGPECIDSIIDMDAVSSRVSALGLDVTVTISKDAGRYLCDFTYYTSLYQSHGRSAFVHVPPLGKPYSAEQLGRALQAIIEEMLDFLEHSEDKINCQHEH
SIO_010081: PGPEP1
subclass of: SO_0000673
so part of: PGPEP1
location: complement(join(749769..749961,751366..751571))
location: region:749769-751571:-1
so has part: feature:751366-751571:-1:exon
so has part: feature:749769-749961:-1:exon

XP_030822486.1
type: Protein
SIO_000068: ncbiprotein

position:751571:-1
position: 751571
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:751366-751571:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:749769-749961:-1:exon

LSM4
type: Gene
subclass of: SO_0000704
RO_0002162: 87175
gene: LSM4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 762255..771836
location: region:762255-771836:1
so has part: feature:762255-771836:1:exon
subclass of: SO_0000010

115914226
type: Gene
SIO_000068: ncbigene

position:762255:1
position: 762255
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:771836:1
position: 771836
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:762255-771836:1:exon

LSM4
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 87175
gene: LSM4
product: LSM4 homolog, U6 small nuclear RNA and mRNA degradation associated
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 mRNAs, 2 ESTs, 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
transcript id: XM_030966627.1
SIO_010081: LSM4
subclass of: SO_0000673
so part of: LSM4
location: join(762255..762728,762929..762970,763077..763175,767398..767581,770467..771836)
location: region:762255-771836:1
so has part: feature:762255-762728:1:exon
so has part: feature:762929-762970:1:exon
so has part: feature:763077-763175:1:exon
so has part: feature:767398-767581:1:exon
so has part: feature:770467-771836:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:762255-762728:1:exon

position:762728:1
position: 762728
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:762929-762970:1:exon

position:762929:1
position: 762929
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:762970:1
position: 762970
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:763077-763175:1:exon

position:763077:1
position: 763077
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:763175:1
position: 763175
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:767398-767581:1:exon

position:767398:1
position: 767398
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:767581:1
position: 767581
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:770467-771836:1:exon

position:770467:1
position: 770467
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LSM4
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 87175
gene: LSM4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: U6 snRNA-associated Sm-like protein LSm4
translation: MLPLSLLKTAQNHPMLVELKNGETYNGHLVSCDNWMNINLREVICTSRDGDKFWRMPECYIRGSTIKYLRIPDEIIDMVKEEVVSKGRGRGGMQQQKQQKGRGVGGAGRGVFGGRGRGIPGSGRGQQEKKPGRQSAKQ
SIO_010081: LSM4
subclass of: SO_0000673
so part of: LSM4
location: join(762726..762728,762929..762970,763077..763175,767398..767581,770467..770555)
location: region:762726-770555:1
so has part: feature:762726-762728:1:exon
so has part: feature:762929-762970:1:exon
so has part: feature:763077-763175:1:exon
so has part: feature:767398-767581:1:exon
so has part: feature:770467-770555:1:exon

XP_030822487.1
type: Protein
SIO_000068: ncbiprotein

position:762726:1
position: 762726
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:770555:1
position: 770555
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:762726-762728:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:762929-762970:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:763077-763175:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:767398-767581:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:770467-770555:1:exon

JUND
type: Gene
subclass of: SO_0000704
RO_0002162: 87175
gene: JUND
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 775748..777295
location: region:775748-777295:1
so has part: feature:775748-777295:1:exon
subclass of: SO_0000010

115914240
type: Gene
SIO_000068: ncbigene

position:775748:1
position: 775748
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:777295:1
position: 777295
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:775748-777295:1:exon

JUND
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 87175
gene: JUND
product: JunD proto-oncogene, AP-1 transcription factor subunit
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 ESTs, 12 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_030966658.1
SIO_010081: JUND
subclass of: SO_0000673
so part of: JUND
location: 775748..777295
location: region:775748-777295:1
so has part: feature:775748-777295:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:775748-777295:1:exon

JUND
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 87175
gene: JUND
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: transcription factor jun-D
translation: METPFYHDDVLSGLGSGFAPSSGSNGLLLPFPGGSMMKKDALGMALPEQVAAALKAPGAASGEAAGLLGSAELGLLKLASPELERLIIQSNGLVTTTPTSGQFLYPKAAASEEQEFAEGFVKALEDLHKQNQLGGGAAGSGGGAGGGGGGGSGGAGELPAAGMAPEPPVYANLSTYPAVSYATDPGPFAAPPPRLPPPPPPPPLKDEPQIVPEVPSFGESPPLSPIDMDTQERIKAERKRLRNRIAASKCRKRKLERISRLEEKVKSLKSQNTELASTASLLREQVAQLKQKVLSHVNSGCQLLPQHQHQVPAY
SIO_010081: JUND
subclass of: SO_0000673
so part of: JUND
location: 775822..776766
location: region:775822-776766:1
so has part: feature:775822-776766:1:exon

XP_030822518.1
type: Protein
SIO_000068: ncbiprotein

position:775822:1
position: 775822
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:776766:1
position: 776766
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:775822-776766:1:exon

LOC115914345
type: Gene
subclass of: SO_0000704
RO_0002162: 87175
gene: LOC115914345
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 778712..781439
location: region:778712-781439:1
so has part: feature:778712-781439:1:exon
subclass of: SO_0000010

115914345
type: Gene
SIO_000068: ncbigene

position:778712:1
position: 778712
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:781439:1
position: 781439
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:778712-781439:1:exon

LOC115914345
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 87175
gene: LOC115914345
product: putative protein TPRXL, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_030966828.1
SIO_010081: LOC115914345
subclass of: SO_0000673
so part of: LOC115914345
location: join(778712..778803,779908..780627,781126..781271,781360..781439)
location: region:778712-781439:1
so has part: feature:778712-778803:1:exon
so has part: feature:779908-780627:1:exon
so has part: feature:781126-781271:1:exon
so has part: feature:781360-781439:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:778712-778803:1:exon

position:778803:1
position: 778803
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:779908-780627:1:exon

position:779908:1
position: 779908
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:780627:1
position: 780627
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:781126-781271:1:exon

position:781126:1
position: 781126
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:781271:1
position: 781271
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:781360-781439:1:exon

position:781360:1
position: 781360
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC115914345
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 87175
gene: LOC115914345
product: putative protein TPRXL, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_030966830.1
SIO_010081: LOC115914345
subclass of: SO_0000673
so part of: LOC115914345
location: join(778712..778803,779908..780627,781131..781271,781360..781439)
location: region:778712-781439:1
so has part: feature:778712-778803:1:exon
so has part: feature:779908-780627:1:exon
so has part: feature:781131-781271:1:exon
so has part: feature:781360-781439:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:778712-778803:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:779908-780627:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:781131-781271:1:exon

position:781131:1
position: 781131
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:781360-781439:1:exon

LOC115914345
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 87175
gene: LOC115914345
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: putative protein TPRXL isoform X1
translation: MARGALRLLCCAAALLAAAATSQGTPPGLDLGAVRAAPSNQTRASTPPSISGSTAPSASPSNQTTAPTPSSTSGSKTSPSSPSSTTTAATPSSTSRSTPPSSPSNITTPTTPSSTSRSTPPSSASITTPTTPSKTSRSTPPSSPSNTTTPTTPSNTSRSTPPQSSPSNTTTPTTPHTISGSTPPLSSSNTTIAPSSARTPPSNATTAPTPSHTSVSRPTEHPSSPSGPASSPTATVSPGPNSTSIVTASSRRTAAPGSSEQHPTELSPAVVAVISLAVCVLLAGVAALLVRRSRRGTPPFQHLDEVPMSKVTEGSPAPTLS
SIO_010081: LOC115914345
subclass of: SO_0000673
so part of: LOC115914345
location: join(778746..778803,779908..780627,781126..781271,781360..781401)
location: region:778746-781401:1
so has part: feature:778746-778803:1:exon
so has part: feature:779908-780627:1:exon
so has part: feature:781126-781271:1:exon
so has part: feature:781360-781401:1:exon

XP_030822688.1
type: Protein
SIO_000068: ncbiprotein

position:778746:1
position: 778746
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:781401:1
position: 781401
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:778746-778803:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:779908-780627:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:781126-781271:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:781360-781401:1:exon

LOC115914345
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 87175
gene: LOC115914345
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: putative protein TPRXL isoform X2
translation: MARGALRLLCCAAALLAAAATSQGTPPGLDLGAVRAAPSNQTRASTPPSISGSTAPSASPSNQTTAPTPSSTSGSKTSPSSPSSTTTAATPSSTSRSTPPSSPSNITTPTTPSSTSRSTPPSSASITTPTTPSKTSRSTPPSSPSNTTTPTTPSNTSRSTPPQSSPSNTTTPTTPHTISGSTPPLSSSNTTIAPSSARTPPSNATTAPTPSHTSVSRPTEHPSSPSGPASSPTATVSPGPNSTSIVTASSRRTAAPGSSAPHRAEPCRGRCHLPGRVRAAGRGGRAAGAAVPARDAPLPAPG
SIO_010081: LOC115914345
subclass of: SO_0000673
so part of: LOC115914345
location: join(778746..778803,779908..780627,781131..781261)
location: region:778746-781261:1
so has part: feature:778746-778803:1:exon
so has part: feature:779908-780627:1:exon
so has part: feature:781131-781261:1:exon

XP_030822690.1
type: Protein
SIO_000068: ncbiprotein

position:781261:1
position: 781261
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:778746-778803:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:779908-780627:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:781131-781261:1:exon

PDE4C
type: Gene
subclass of: SO_0000704
RO_0002162: 87175
gene: PDE4C
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 784791..791158
location: region:784791-791158:1
so has part: feature:784791-791158:1:exon
subclass of: SO_0000010

115914209
type: Gene
SIO_000068: ncbigene

position:784791:1
position: 784791
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:791158:1
position: 791158
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:784791-791158:1:exon

PDE4C
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 87175
gene: PDE4C
product: phosphodiesterase 4C
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 58 Proteins, and 82% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_030966598.1
SIO_010081: PDE4C
subclass of: SO_0000673
so part of: PDE4C
location: join(784791..784939,786522..786710,786797..786833,786939..787003,787118..787167,787681..787793,787897..787990,788402..788580,788664..788762,788833..788997,789081..789180,789262..789416,789499..789621,789850..790032,790287..791158)
location: region:784791-791158:1
so has part: feature:784791-784939:1:exon
so has part: feature:786522-786710:1:exon
so has part: feature:786797-786833:1:exon
so has part: feature:786939-787003:1:exon
so has part: feature:787118-787167:1:exon
so has part: feature:787681-787793:1:exon
so has part: feature:787897-787990:1:exon
so has part: feature:788402-788580:1:exon
so has part: feature:788664-788762:1:exon
so has part: feature:788833-788997:1:exon
so has part: feature:789081-789180:1:exon
so has part: feature:789262-789416:1:exon
so has part: feature:789499-789621:1:exon
so has part: feature:789850-790032:1:exon
so has part: feature:790287-791158:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:784791-784939:1:exon

position:784939:1
position: 784939
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:786522-786710:1:exon

position:786522:1
position: 786522
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:786710:1
position: 786710
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:786797-786833:1:exon

position:786797:1
position: 786797
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:786833:1
position: 786833
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:786939-787003:1:exon

position:786939:1
position: 786939
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:787003:1
position: 787003
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:787118-787167:1:exon

position:787118:1
position: 787118
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:787167:1
position: 787167
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:787681-787793:1:exon

position:787681:1
position: 787681
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:787793:1
position: 787793
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:787897-787990:1:exon

position:787897:1
position: 787897
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:787990:1
position: 787990
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:788402-788580:1:exon

position:788402:1
position: 788402
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:788580:1
position: 788580
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:788664-788762:1:exon

position:788664:1
position: 788664
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:788762:1
position: 788762
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:788833-788997:1:exon

position:788833:1
position: 788833
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:788997:1
position: 788997
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:789081-789180:1:exon

position:789081:1
position: 789081
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:789180:1
position: 789180
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:789262-789416:1:exon

position:789262:1
position: 789262
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:789416:1
position: 789416
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:789499-789621:1:exon

position:789499:1
position: 789499
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:789621:1
position: 789621
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:789850-790032:1:exon

position:789850:1
position: 789850
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:790032:1
position: 790032
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:790287-791158:1:exon

position:790287:1
position: 790287
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

PDE4C
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 87175
gene: PDE4C
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: cAMP-specific 3',5'-cyclic phosphodiesterase 4C
translation: MLPSAPRSPGASPATSPRGSPRNSPVLFRKLLMNQSIRLQRRFTVAHPLCFDLENGPPGRGALDPQASPGAGLVLQGSFSHGQRRESFLYRSDSDYDLSPKAMSRNSSIASDLHGEDMIVTPFAQVLASLRTVRSNLSHLQDRAGIKRGSSSSLPSGSKASLSEDAHQKLSRETLEELDWCLDQLETLQTRHSVSEMASNKFKRMLNRELSHLSETSRSGNQVSEYISSTFLDKQHEVEIPSALAKDKEKERRKRPMSQISGVRKLKHSSSLAAAGIPRFGVRTEHEALLAKELEDTNKWGLDVFKVAEYSGNRPLTVIMYSIFQERDLMKTFRIPVNTFITYMLTLEDHYHADVAYHNSLHAADVAQSTHVLLSTPALEAVFTDLEILAAIFASAIHDVDHPGVSNQFLINTNSELALMYNDASVLENHHLAVGFKLLQEENCDIFQNLSRKQRQTLRKMVIDMVLATDMSKHMNLLADLKTMVETKKVTSLGVLLLDNYSDRIQVLQNMVHCADLSNPTKPLELYRQWTDRIMVEFFHQGDREREKGMEISPMCDKHTASVEKSQVGFIDFIAHPLWETWADLVHPDAQELLDTLEDNREWYQSMIPRSPSPPPAAPAASPAATDKFQFELTLEEEEEEEEGESDTELEGAESPLDEDNSGSKTPGTDDSESADTKGLSPGAGDRGSPVPRRGDVDNRQALEGTLPKDGGSGCSVPGPEGSQGLCLDTEGNVTFLSLGT
SIO_010081: PDE4C
subclass of: SO_0000673
so part of: PDE4C
location: join(784791..784939,786522..786710,786797..786833,786939..787003,787118..787167,787681..787793,787897..787990,788402..788580,788664..788762,788833..788997,789081..789180,789262..789416,789499..789621,789850..790032,790287..790811)
location: region:784791-790811:1
so has part: feature:784791-784939:1:exon
so has part: feature:786522-786710:1:exon
so has part: feature:786797-786833:1:exon
so has part: feature:786939-787003:1:exon
so has part: feature:787118-787167:1:exon
so has part: feature:787681-787793:1:exon
so has part: feature:787897-787990:1:exon
so has part: feature:788402-788580:1:exon
so has part: feature:788664-788762:1:exon
so has part: feature:788833-788997:1:exon
so has part: feature:789081-789180:1:exon
so has part: feature:789262-789416:1:exon
so has part: feature:789499-789621:1:exon
so has part: feature:789850-790032:1:exon
so has part: feature:790287-790811:1:exon

XP_030822458.1
type: Protein
SIO_000068: ncbiprotein

position:790811:1
position: 790811
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:784791-784939:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:786522-786710:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:786797-786833:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:786939-787003:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:787118-787167:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:787681-787793:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:787897-787990:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:788402-788580:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:788664-788762:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:788833-788997:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:789081-789180:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:789262-789416:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:789499-789621:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:789850-790032:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:790287-790811:1:exon

RAB3A
type: Gene
subclass of: SO_0000704
RO_0002162: 87175
gene: RAB3A
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 791595..796704
location: region:791595-796704:1
so has part: feature:791595-796704:1:exon
subclass of: SO_0000010

115914351
type: Gene
SIO_000068: ncbigene

position:791595:1
position: 791595
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:796704:1
position: 796704
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:791595-796704:1:exon

RAB3A
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 87175
gene: RAB3A
product: RAB3A, member RAS oncogene family
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 ESTs, 45 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_030966836.1
SIO_010081: RAB3A
subclass of: SO_0000673
so part of: RAB3A
location: join(791595..791686,793021..793108,794581..794808,795433..795551,795641..795765,796144..796704)
location: region:791595-796704:1
so has part: feature:791595-791686:1:exon
so has part: feature:793021-793108:1:exon
so has part: feature:794581-794808:1:exon
so has part: feature:795433-795551:1:exon
so has part: feature:795641-795765:1:exon
so has part: feature:796144-796704:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:791595-791686:1:exon

position:791686:1
position: 791686
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:793021-793108:1:exon

position:793021:1
position: 793021
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:793108:1
position: 793108
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:794581-794808:1:exon

position:794581:1
position: 794581
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:794808:1
position: 794808
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:795433-795551:1:exon

position:795433:1
position: 795433
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:795551:1
position: 795551
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:795641-795765:1:exon

position:795641:1
position: 795641
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:795765:1
position: 795765
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:796144-796704:1:exon

position:796144:1
position: 796144
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

RAB3A
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 87175
gene: RAB3A
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: ras-related protein Rab-3A
translation: MASATDSRYGQKESSDQNFDYMFKILIIGNSSVGKTSFLFRYADDSFTPAFVSTVGIDFKVKTIYRNDKRIKLQIWDTAGQERYRTITTAYYRGAMGFILMYDITNEESFNAVQDWSTQIKTYSWDNAQVLLVGNKCDMEDERVVSSEKGRQLAEHLGFEFFEASAKDNINVKQTFERLVDIICEKMSESLDTADPAVTGAKQGPQLTDQQAPPPGLCLLGASPPQIPPKSGQCTPNPPNPPELLLLGVPRGLLLLIPPKGLRPL
SIO_010081: RAB3A
subclass of: SO_0000673
so part of: RAB3A
location: join(794581..794808,795433..795551,795641..795765,796144..796469)
location: region:794581-796469:1
so has part: feature:794581-794808:1:exon
so has part: feature:795433-795551:1:exon
so has part: feature:795641-795765:1:exon
so has part: feature:796144-796469:1:exon

XP_030822696.1
type: Protein
SIO_000068: ncbiprotein

position:796469:1
position: 796469
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:794581-794808:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:795433-795551:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:795641-795765:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:796144-796469:1:exon

MPV17L2
type: Gene
subclass of: SO_0000704
RO_0002162: 87175
gene: MPV17L2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(798694..802680)
location: region:798694-802680:-1
so has part: feature:798694-802680:-1:exon
subclass of: SO_0000010

115914350
type: Gene
SIO_000068: ncbigene

position:798694:-1
position: 798694
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:802680:-1
position: 802680
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:798694-802680:-1:exon

MPV17L2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 87175
gene: MPV17L2
product: MPV17 mitochondrial inner membrane protein like 2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 13 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
transcript id: XM_030966835.1
SIO_010081: MPV17L2
subclass of: SO_0000673
so part of: MPV17L2
location: complement(join(798694..798888,800018..800146,800236..800312,800990..801160,802144..802322,802578..802680))
location: region:798694-802680:-1
so has part: feature:802578-802680:-1:exon
so has part: feature:802144-802322:-1:exon
so has part: feature:800990-801160:-1:exon
so has part: feature:800236-800312:-1:exon
so has part: feature:800018-800146:-1:exon
so has part: feature:798694-798888:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:802578-802680:-1:exon

position:802578:-1
position: 802578
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:802144-802322:-1:exon

position:802144:-1
position: 802144
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:802322:-1
position: 802322
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:800990-801160:-1:exon

position:800990:-1
position: 800990
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:801160:-1
position: 801160
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:800236-800312:-1:exon

position:800236:-1
position: 800236
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:800312:-1
position: 800312
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:800018-800146:-1:exon

position:800018:-1
position: 800018
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:800146:-1
position: 800146
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:798694-798888:-1:exon

position:798888:-1
position: 798888
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

MPV17L2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 87175
gene: MPV17L2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: mpv17-like protein 2
translation: MLLRSWRSLFTGRLLLLTNTVSCGGLLAAGDWLHQEWHRRKHPQSQLQLGRTGRMFVVGCSLGPLMHYWYLWLDWALPARGVRCLRTVLQKVLIDQLVASPTMGAWYFMAIGTLEGQSLQESWDELKEKFWEMYKADWSVWPAAQILNFLFVPPPFRVAYVNVVTLGWDTYLSYLKHRPRSPGQEPPRQSQSSAGA
SIO_010081: MPV17L2
subclass of: SO_0000673
so part of: MPV17L2
location: complement(join(798832..798888,800018..800146,800236..800312,800990..801160,802144..802300))
location: region:798832-802300:-1
so has part: feature:802144-802300:-1:exon
so has part: feature:800990-801160:-1:exon
so has part: feature:800236-800312:-1:exon
so has part: feature:800018-800146:-1:exon
so has part: feature:798832-798888:-1:exon

XP_030822695.1
type: Protein
SIO_000068: ncbiprotein

position:798832:-1
position: 798832
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:802300:-1
position: 802300
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:802144-802300:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:800990-801160:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:800236-800312:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:800018-800146:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:798832-798888:-1:exon

DUS3L
type: Gene
subclass of: SO_0000704
RO_0002162: 87175
gene: DUS3L
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(803441..809607)
location: region:803441-809607:-1
so has part: feature:803441-809607:-1:exon
subclass of: SO_0000010

115914275
type: Gene
SIO_000068: ncbigene

position:803441:-1
position: 803441
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:809607:-1
position: 809607
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:803441-809607:-1:exon

DUS3L
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 87175
gene: DUS3L
product: dihydrouridine synthase 3 like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_030966711.1
SIO_010081: DUS3L
subclass of: SO_0000673
so part of: DUS3L
location: complement(join(803441..803698,803972..804100,804183..804371,804639..804714,805368..805464,806310..806420,806492..806557,806849..806965,807057..807209,807280..807321,807684..808454,808981..809269,809558..809607))
location: region:803441-809607:-1
so has part: feature:809558-809607:-1:exon
so has part: feature:808981-809269:-1:exon
so has part: feature:807684-808454:-1:exon
so has part: feature:807280-807321:-1:exon
so has part: feature:807057-807209:-1:exon
so has part: feature:806849-806965:-1:exon
so has part: feature:806492-806557:-1:exon
so has part: feature:806310-806420:-1:exon
so has part: feature:805368-805464:-1:exon
so has part: feature:804639-804714:-1:exon
so has part: feature:804183-804371:-1:exon
so has part: feature:803972-804100:-1:exon
so has part: feature:803441-803698:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:809558-809607:-1:exon

position:809558:-1
position: 809558
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:808981-809269:-1:exon

position:808981:-1
position: 808981
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:809269:-1
position: 809269
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:807684-808454:-1:exon

position:807684:-1
position: 807684
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:808454:-1
position: 808454
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:807280-807321:-1:exon

position:807280:-1
position: 807280
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:807321:-1
position: 807321
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:807057-807209:-1:exon

position:807057:-1
position: 807057
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:807209:-1
position: 807209
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:806849-806965:-1:exon

position:806849:-1
position: 806849
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:806965:-1
position: 806965
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:806492-806557:-1:exon

position:806492:-1
position: 806492
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:806557:-1
position: 806557
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:806310-806420:-1:exon

position:806310:-1
position: 806310
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:806420:-1
position: 806420
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:805368-805464:-1:exon

position:805368:-1
position: 805368
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:805464:-1
position: 805464
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:804639-804714:-1:exon

position:804639:-1
position: 804639
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:804714:-1
position: 804714
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:804183-804371:-1:exon

position:804183:-1
position: 804183
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:804371:-1
position: 804371
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:803972-804100:-1:exon

position:803972:-1
position: 803972
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:804100:-1
position: 804100
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:803441-803698:-1:exon

position:803698:-1
position: 803698
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

DUS3L
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 87175
gene: DUS3L
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: tRNA-dihydrouridine(47) synthase [NAD(P)(+)]-like
translation: MAAAAAPGVAPVRARFLTSKEQFHAYLRAGGEEEEEEEEKEEKKEEEQVSEPPAKRVKAEELGQDGESQGNAGEEEKEHQEKKRARGQNKSRPCMKPSCYEQSRLCPSVTQGCAGQCRFGPRCRFLHDVSQYLAAKPADLGQRCVLFDTFGRCPYGVTCRFGQAHLGDGHQNLVNASLAQQWEGKLLVRNGLSKELQQQLRKRKFSFHKAEEFLLGLRAGKGGKATGSSTEVSNCADPQDGLRDSPVLQEQGEDPRPEILQSSQRAEDAPRPEALQSSQRAEGAPKPEALQSSQRAEDAPKPEALQNSQGAEGAPKPEILQSSQGDEGAPKPEALQSSQGAESAPSIPTLGPLTDEDITKLRPCEKKKLEIQGKLYLAPLTTCGNLPFRRICKGFGADVTCGEMAVCTNLLQGQFSEWALLKRHHTEDIFGVQLEGAFPDTMTKCAELLNRTIDVDFVDINVGCPIDLVYKKGGGCALMTRSNKFEQIVRGMNSVLDVPLTVKIRTGVQEKVNVAHKIIPRIREWGASMVTLHGRSREQRYTRSADWAYIAECARLASPMPLFGNGDILSYEDANRAMQMGVSGIMIARGALIKPWLFTEIKEQRHWDISSRERFDILKDFTNYGLEHWGSDTQGVEKTRKFLLEWLSFLCRYIPVGLLEHLPQKINERPPYYLGRDYLETLMASQNVDDWIKISELLLGPVPPSFTFLPKHKANSYR
SIO_010081: DUS3L
subclass of: SO_0000673
so part of: DUS3L
location: complement(join(803626..803698,803972..804100,804183..804371,804639..804714,805368..805464,806310..806420,806492..806557,806849..806965,807057..807209,807280..807321,807684..808454,808981..809269,809558..809601))
location: region:803626-809601:-1
so has part: feature:809558-809601:-1:exon
so has part: feature:808981-809269:-1:exon
so has part: feature:807684-808454:-1:exon
so has part: feature:807280-807321:-1:exon
so has part: feature:807057-807209:-1:exon
so has part: feature:806849-806965:-1:exon
so has part: feature:806492-806557:-1:exon
so has part: feature:806310-806420:-1:exon
so has part: feature:805368-805464:-1:exon
so has part: feature:804639-804714:-1:exon
so has part: feature:804183-804371:-1:exon
so has part: feature:803972-804100:-1:exon
so has part: feature:803626-803698:-1:exon

XP_030822571.1
type: Protein
SIO_000068: ncbiprotein

position:803626:-1
position: 803626
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:809601:-1
position: 809601
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:809558-809601:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:808981-809269:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:807684-808454:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:807280-807321:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:807057-807209:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:806849-806965:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:806492-806557:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:806310-806420:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:805368-805464:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:804639-804714:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:804183-804371:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:803972-804100:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:803626-803698:-1:exon

NRTN
type: Gene
subclass of: SO_0000704
RO_0002162: 87175
gene: NRTN
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 845657..863423
location: region:845657-863423:1
so has part: feature:845657-863423:1:exon
subclass of: SO_0000010

115914293
type: Gene
SIO_000068: ncbigene

position:845657:1
position: 845657
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:863423:1
position: 863423
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:845657-863423:1:exon

NRTN
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 87175
gene: NRTN
product: neurturin, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_030966744.1
SIO_010081: NRTN
subclass of: SO_0000673
so part of: NRTN
location: join(845657..845782,858624..858888,860198..863423)
location: region:845657-863423:1
so has part: feature:845657-845782:1:exon
so has part: feature:858624-858888:1:exon
so has part: feature:860198-863423:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:845657-845782:1:exon

position:845782:1
position: 845782
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:858624-858888:1:exon

position:858624:1
position: 858624
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:858888:1
position: 858888
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:860198-863423:1:exon

position:860198:1
position: 860198
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

NRTN
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 87175
gene: NRTN
product: neurturin, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_030966745.1
SIO_010081: NRTN
subclass of: SO_0000673
so part of: NRTN
location: join(845695..845782,858715..858888,860198..863423)
location: region:845695-863423:1
so has part: feature:845695-845782:1:exon
so has part: feature:858715-858888:1:exon
so has part: feature:860198-863423:1:exon

position:845695:1
position: 845695
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:845695-845782:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:858715-858888:1:exon

position:858715:1
position: 858715
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:860198-863423:1:exon

NRTN
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 87175
gene: NRTN
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: neurturin isoform X1
translation: MKVWKFAAIASMLLSSMLSILVCRDMFSGSRELSPLPSSPSSSRDSSSSSSSSSSSSSSSSSLRRSPRALQRHGSLLAQYSALLESYTEGEMRQLLSALVERYRQAVNSGGHELPLFPRAGGRRKRARARHKPCELRELEVSVSELGLGYESDETVLFRYCSGTCEAAVRSYDLSLKSMRSRRKIRKEKIRARPCCRPLAYDDDVSFLDAYNRYYTVNELSAKECGCV
SIO_010081: NRTN
subclass of: SO_0000673
so part of: NRTN
location: join(858651..858888,860198..860646)
location: region:858651-860646:1
so has part: feature:858651-858888:1:exon
so has part: feature:860198-860646:1:exon

XP_030822604.1
type: Protein
SIO_000068: ncbiprotein

position:858651:1
position: 858651
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:860646:1
position: 860646
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:858651-858888:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:860198-860646:1:exon

NRTN
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 87175
gene: NRTN
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: neurturin isoform X2
translation: MFSGSRELSPLPSSPSSSRDSSSSSSSSSSSSSSSSSLRRSPRALQRHGSLLAQYSALLESYTEGEMRQLLSALVERYRQAVNSGGHELPLFPRAGGRRKRARARHKPCELRELEVSVSELGLGYESDETVLFRYCSGTCEAAVRSYDLSLKSMRSRRKIRKEKIRARPCCRPLAYDDDVSFLDAYNRYYTVNELSAKECGCV
SIO_010081: NRTN
subclass of: SO_0000673
so part of: NRTN
location: join(858726..858888,860198..860646)
location: region:858726-860646:1
so has part: feature:858726-858888:1:exon
so has part: feature:860198-860646:1:exon

XP_030822605.1
type: Protein
SIO_000068: ncbiprotein

position:858726:1
position: 858726
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:858726-858888:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:860198-860646:1:exon

ATCAY
type: Gene
subclass of: SO_0000704
RO_0002162: 87175
gene: ATCAY
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 878882..895871
location: region:878882-895871:1
so has part: feature:878882-895871:1:exon
subclass of: SO_0000010

115914353
type: Gene
SIO_000068: ncbigene

position:878882:1
position: 878882
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:895871:1
position: 895871
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:878882-895871:1:exon

ATCAY
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 87175
gene: ATCAY
product: ATCAY kinesin light chain interacting caytaxin, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 ESTs, 18 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_030966839.1
SIO_010081: ATCAY
subclass of: SO_0000673
so part of: ATCAY
location: join(878882..879342,880402..880529,885158..885222,885970..886191,886666..886851,887307..887409,889012..889143,889528..889614,890280..890378,890587..890622,890749..890784,891752..895871)
location: region:878882-895871:1
so has part: feature:878882-879342:1:exon
so has part: feature:880402-880529:1:exon
so has part: feature:885158-885222:1:exon
so has part: feature:885970-886191:1:exon
so has part: feature:886666-886851:1:exon
so has part: feature:887307-887409:1:exon
so has part: feature:889012-889143:1:exon
so has part: feature:889528-889614:1:exon
so has part: feature:890280-890378:1:exon
so has part: feature:890587-890622:1:exon
so has part: feature:890749-890784:1:exon
so has part: feature:891752-895871:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:878882-879342:1:exon

position:879342:1
position: 879342
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:880402-880529:1:exon

position:880402:1
position: 880402
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:880529:1
position: 880529
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:885158-885222:1:exon

position:885158:1
position: 885158
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:885222:1
position: 885222
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:885970-886191:1:exon

position:885970:1
position: 885970
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:886191:1
position: 886191
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:886666-886851:1:exon

position:886666:1
position: 886666
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:886851:1
position: 886851
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:887307-887409:1:exon

position:887307:1
position: 887307
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:887409:1
position: 887409
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:889012-889143:1:exon

position:889012:1
position: 889012
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:889143:1
position: 889143
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:889528-889614:1:exon

position:889528:1
position: 889528
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:889614:1
position: 889614
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:890280-890378:1:exon

position:890280:1
position: 890280
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:890378:1
position: 890378
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:890587-890622:1:exon

position:890587:1
position: 890587
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:890622:1
position: 890622
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:890749-890784:1:exon

position:890749:1
position: 890749
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:890784:1
position: 890784
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:891752-895871:1:exon

position:891752:1
position: 891752
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

ATCAY
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 87175
gene: ATCAY
product: ATCAY kinesin light chain interacting caytaxin, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 ESTs, 21 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_030966838.1
SIO_010081: ATCAY
subclass of: SO_0000673
so part of: ATCAY
location: join(878882..879342,880402..880529,885158..885222,885970..886191,886666..886851,887307..887409,889012..889143,889528..889614,890280..890378,890587..890622,890749..890784,891458..891493,891752..891943)
location: region:878882-891943:1
so has part: feature:878882-879342:1:exon
so has part: feature:880402-880529:1:exon
so has part: feature:885158-885222:1:exon
so has part: feature:885970-886191:1:exon
so has part: feature:886666-886851:1:exon
so has part: feature:887307-887409:1:exon
so has part: feature:889012-889143:1:exon
so has part: feature:889528-889614:1:exon
so has part: feature:890280-890378:1:exon
so has part: feature:890587-890622:1:exon
so has part: feature:890749-890784:1:exon
so has part: feature:891458-891493:1:exon
so has part: feature:891752-891943:1:exon

position:891943:1
position: 891943
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:878882-879342:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:880402-880529:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:885158-885222:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:885970-886191:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:886666-886851:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:887307-887409:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:889012-889143:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:889528-889614:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:890280-890378:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:890587-890622:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:890749-890784:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:891458-891493:1:exon

position:891458:1
position: 891458
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:891493:1
position: 891493
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:891752-891943:1:exon

ATCAY
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 87175
gene: ATCAY
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: caytaxin isoform X1
translation: MGTTEATLRMENVDVKEEWQDEDFPRPLPEETGMESLGSPTEDETTSSPPNTLNFNGAHRKRKTLVAPEINISLDQSEGSILSDDFLDTPDDLDINVDDIETPDETDSLEFLGNGNELEWEDDTPVATAKNMPGDSADLFGDGGTEDGSATNGRLWRTVIIGEQEHRIDLQMIKPYMRVVTHGGYYGEGLNAIIVFAACYLPDSNLADYHYIMENLFLYVISSLELLVAEDYMIVYLNGATPRRRMPGLGWLKKCYQMIDRRLRKNLKALIIVHPSWFIRTVLAISRPFISVKFINKIQYVHSLEELEQLIPMEHVQIPECVLQYEEERIKARKERAEEKQDMAERESMPVPPAEDQETSMS
SIO_010081: ATCAY
subclass of: SO_0000673
so part of: ATCAY
location: join(880453..880529,885158..885222,885970..886191,886666..886851,887307..887409,889012..889143,889528..889614,890280..890378,890587..890622,890749..890784,891458..891493,891752..891761)
location: region:880453-891761:1
so has part: feature:880453-880529:1:exon
so has part: feature:885158-885222:1:exon
so has part: feature:885970-886191:1:exon
so has part: feature:886666-886851:1:exon
so has part: feature:887307-887409:1:exon
so has part: feature:889012-889143:1:exon
so has part: feature:889528-889614:1:exon
so has part: feature:890280-890378:1:exon
so has part: feature:890587-890622:1:exon
so has part: feature:890749-890784:1:exon
so has part: feature:891458-891493:1:exon
so has part: feature:891752-891761:1:exon

XP_030822698.1
type: Protein
SIO_000068: ncbiprotein

position:880453:1
position: 880453
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:891761:1
position: 891761
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:880453-880529:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:885158-885222:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:885970-886191:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:886666-886851:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:887307-887409:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:889012-889143:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:889528-889614:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:890280-890378:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:890587-890622:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:890749-890784:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:891458-891493:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:891752-891761:1:exon

ATCAY
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 87175
gene: ATCAY
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: caytaxin isoform X2
translation: MGTTEATLRMENVDVKEEWQDEDFPRPLPEETGMESLGSPTEDETTSSPPNTLNFNGAHRKRKTLVAPEINISLDQSEGSILSDDFLDTPDDLDINVDDIETPDETDSLEFLGNGNELEWEDDTPVATAKNMPGDSADLFGDGGTEDGSATNGRLWRTVIIGEQEHRIDLQMIKPYMRVVTHGGYYGEGLNAIIVFAACYLPDSNLADYHYIMENLFLYVISSLELLVAEDYMIVYLNGATPRRRMPGLGWLKKCYQMIDRRLRKNLKALIIVHPSWFIRTVLAISRPFISVKFINKIQYVHSLEELEQLIPMEHVQIPECVLQYEEERIKARKERAEEKQDMAERESMS
SIO_010081: ATCAY
subclass of: SO_0000673
so part of: ATCAY
location: join(880453..880529,885158..885222,885970..886191,886666..886851,887307..887409,889012..889143,889528..889614,890280..890378,890587..890622,890749..890784,891752..891761)
location: region:880453-891761:1
so has part: feature:880453-880529:1:exon
so has part: feature:885158-885222:1:exon
so has part: feature:885970-886191:1:exon
so has part: feature:886666-886851:1:exon
so has part: feature:887307-887409:1:exon
so has part: feature:889012-889143:1:exon
so has part: feature:889528-889614:1:exon
so has part: feature:890280-890378:1:exon
so has part: feature:890587-890622:1:exon
so has part: feature:890749-890784:1:exon
so has part: feature:891752-891761:1:exon

XP_030822699.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:880453-880529:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:885158-885222:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:885970-886191:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:886666-886851:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:887307-887409:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:889012-889143:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:889528-889614:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:890280-890378:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:890587-890622:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:890749-890784:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:891752-891761:1:exon

NMRK2
type: Gene
subclass of: SO_0000704
RO_0002162: 87175
gene: NMRK2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 903041..908794
location: region:903041-908794:1
so has part: feature:903041-908794:1:exon
subclass of: SO_0000010

115914256
type: Gene
SIO_000068: ncbigene

position:903041:1
position: 903041
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:908794:1
position: 908794
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:903041-908794:1:exon

NMRK2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 87175
gene: NMRK2
product: nicotinamide riboside kinase 2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 ESTs, 17 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
transcript id: XM_030966681.1
SIO_010081: NMRK2
subclass of: SO_0000673
so part of: NMRK2
location: join(903041..903209,904724..904814,905939..905987,906193..906364,907183..907254,907766..907872,908271..908356,908447..908794)
location: region:903041-908794:1
so has part: feature:903041-903209:1:exon
so has part: feature:904724-904814:1:exon
so has part: feature:905939-905987:1:exon
so has part: feature:906193-906364:1:exon
so has part: feature:907183-907254:1:exon
so has part: feature:907766-907872:1:exon
so has part: feature:908271-908356:1:exon
so has part: feature:908447-908794:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:903041-903209:1:exon

position:903209:1
position: 903209
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:904724-904814:1:exon

position:904724:1
position: 904724
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:904814:1
position: 904814
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:905939-905987:1:exon

position:905939:1
position: 905939
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:905987:1
position: 905987
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:906193-906364:1:exon

position:906193:1
position: 906193
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:906364:1
position: 906364
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:907183-907254:1:exon

position:907183:1
position: 907183
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:907254:1
position: 907254
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:907766-907872:1:exon

position:907766:1
position: 907766
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:907872:1
position: 907872
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:908271-908356:1:exon

position:908271:1
position: 908271
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:908356:1
position: 908356
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:908447-908794:1:exon

position:908447:1
position: 908447
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

NMRK2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 87175
gene: NMRK2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: nicotinamide riboside kinase 2
translation: MKYIIGIGGVTNGGKTTLTNRLVKALPNCCVVHQDDFFKPQDQIEVGEDGFKQWDVLDSLDMEALVSTVRAWIENPVKFARSHGVNVTPGSREPTSQDIHILVIEGFLLYNYKPLIELFDLRYYLAVPYDECKRRRSTRNYTVPDPPGLFDGHVWPMYLKHRKEMEDSGVDVVYLDGLKSRDELYNQVFEDIHNKLLNCS
SIO_010081: NMRK2
subclass of: SO_0000673
so part of: NMRK2
location: join(903184..903209,904724..904814,905939..905987,906193..906364,907183..907254,907766..907872,908271..908356)
location: region:903184-908356:1
so has part: feature:903184-903209:1:exon
so has part: feature:904724-904814:1:exon
so has part: feature:905939-905987:1:exon
so has part: feature:906193-906364:1:exon
so has part: feature:907183-907254:1:exon
so has part: feature:907766-907872:1:exon
so has part: feature:908271-908356:1:exon

XP_030822541.1
type: Protein
SIO_000068: ncbiprotein

position:903184:1
position: 903184
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:903184-903209:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:904724-904814:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:905939-905987:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:906193-906364:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:907183-907254:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:907766-907872:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:908271-908356:1:exon

DAPK3
type: Gene
subclass of: SO_0000704
RO_0002162: 87175
gene: DAPK3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(910951..916239)
location: region:910951-916239:-1
so has part: feature:910951-916239:-1:exon
subclass of: SO_0000010

115914221
type: Gene
SIO_000068: ncbigene

position:910951:-1
position: 910951
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:916239:-1
position: 916239
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:910951-916239:-1:exon

DAPK3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 87175
gene: DAPK3
product: death associated protein kinase 3, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 17 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
transcript id: XM_030966619.1
SIO_010081: DAPK3
subclass of: SO_0000673
so part of: DAPK3
location: complement(join(910951..911928,912067..912112,912533..912685,912785..912811,912934..912982,913135..913264,913650..914010,915054..915199,916181..916239))
location: region:910951-916239:-1
so has part: feature:916181-916239:-1:exon
so has part: feature:915054-915199:-1:exon
so has part: feature:913650-914010:-1:exon
so has part: feature:913135-913264:-1:exon
so has part: feature:912934-912982:-1:exon
so has part: feature:912785-912811:-1:exon
so has part: feature:912533-912685:-1:exon
so has part: feature:912067-912112:-1:exon
so has part: feature:910951-911928:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:916181-916239:-1:exon

position:916181:-1
position: 916181
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:915054-915199:-1:exon

position:915054:-1
position: 915054
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:915199:-1
position: 915199
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:913650-914010:-1:exon

position:913650:-1
position: 913650
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:914010:-1
position: 914010
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:913135-913264:-1:exon

position:913135:-1
position: 913135
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:913264:-1
position: 913264
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:912934-912982:-1:exon

position:912934:-1
position: 912934
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:912982:-1
position: 912982
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:912785-912811:-1:exon

position:912785:-1
position: 912785
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:912811:-1
position: 912811
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:912533-912685:-1:exon

position:912533:-1
position: 912533
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:912685:-1
position: 912685
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:912067-912112:-1:exon

position:912067:-1
position: 912067
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:912112:-1
position: 912112
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:910951-911928:-1:exon

position:911928:-1
position: 911928
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

DAPK3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 87175
gene: DAPK3
product: death associated protein kinase 3, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 16 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_030966620.1
SIO_010081: DAPK3
subclass of: SO_0000673
so part of: DAPK3
location: complement(join(910951..911928,912067..912112,912533..912685,912785..912811,912934..912982,913135..913264,913650..914010,915054..915199,916151..916214))
location: region:910951-916214:-1
so has part: feature:916151-916214:-1:exon
so has part: feature:915054-915199:-1:exon
so has part: feature:913650-914010:-1:exon
so has part: feature:913135-913264:-1:exon
so has part: feature:912934-912982:-1:exon
so has part: feature:912785-912811:-1:exon
so has part: feature:912533-912685:-1:exon
so has part: feature:912067-912112:-1:exon
so has part: feature:910951-911928:-1:exon

position:916214:-1
position: 916214
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:916151-916214:-1:exon

position:916151:-1
position: 916151
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:915054-915199:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:913650-914010:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:913135-913264:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:912934-912982:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:912785-912811:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:912533-912685:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:912067-912112:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:910951-911928:-1:exon

DAPK3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 87175
gene: DAPK3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: death-associated protein kinase 3
translation: MSTFRQESVEDFYEMGEELGSGQFAIVRKCRERKTGLEYAAKFIKKRRLSSSRRGVSREEIEREVDILREIQHPNIITLHDIFENKTDVVLILELVSGGELFDFLAEKESLTEEEATQFLKQILDGVHYLHSKRIAHFDLKPENIMLLDKNVPNPRIKLIDFGIAHKIEAGNEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGETKQETLTNISAVNYDFDEEYFSNTSELAKDFIRRLLVKDPKKRMTIAQSLEHPWIKVIKRRNVRNEDSCKKPERRRLKTTRLKEYTIKSHSSMPPNNTYINFERFSKVMEEVAAAEESLRELERNKKSFQEDIEALLSIYEEKESWYKEENESISQDLRQIRQELQKTEALKKQAQEETKSVVQAANGLKRRYRKLENHYEALAKQVASEMKFVQELVWSIEREKLQSSEGDGSIR
SIO_010081: DAPK3
subclass of: SO_0000673
so part of: DAPK3
location: complement(join(911386..911928,912067..912112,912533..912685,912785..912811,912934..912982,913135..913264,913650..914010,915054..915115))
location: region:911386-915115:-1
so has part: feature:915054-915115:-1:exon
so has part: feature:913650-914010:-1:exon
so has part: feature:913135-913264:-1:exon
so has part: feature:912934-912982:-1:exon
so has part: feature:912785-912811:-1:exon
so has part: feature:912533-912685:-1:exon
so has part: feature:912067-912112:-1:exon
so has part: feature:911386-911928:-1:exon

XP_030822479.1
type: Protein
SIO_000068: ncbiprotein

position:911386:-1
position: 911386
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:915115:-1
position: 915115
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:915054-915115:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:913650-914010:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:913135-913264:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:912934-912982:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:912785-912811:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:912533-912685:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:912067-912112:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:911386-911928:-1:exon

DAPK3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 87175
gene: DAPK3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: death-associated protein kinase 3
translation: MSTFRQESVEDFYEMGEELGSGQFAIVRKCRERKTGLEYAAKFIKKRRLSSSRRGVSREEIEREVDILREIQHPNIITLHDIFENKTDVVLILELVSGGELFDFLAEKESLTEEEATQFLKQILDGVHYLHSKRIAHFDLKPENIMLLDKNVPNPRIKLIDFGIAHKIEAGNEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGETKQETLTNISAVNYDFDEEYFSNTSELAKDFIRRLLVKDPKKRMTIAQSLEHPWIKVIKRRNVRNEDSCKKPERRRLKTTRLKEYTIKSHSSMPPNNTYINFERFSKVMEEVAAAEESLRELERNKKSFQEDIEALLSIYEEKESWYKEENESISQDLRQIRQELQKTEALKKQAQEETKSVVQAANGLKRRYRKLENHYEALAKQVASEMKFVQELVWSIEREKLQSSEGDGSIR
SIO_010081: DAPK3
subclass of: SO_0000673
so part of: DAPK3
location: complement(join(911386..911928,912067..912112,912533..912685,912785..912811,912934..912982,913135..913264,913650..914010,915054..915115))
location: region:911386-915115:-1
so has part: feature:915054-915115:-1:exon
so has part: feature:913650-914010:-1:exon
so has part: feature:913135-913264:-1:exon
so has part: feature:912934-912982:-1:exon
so has part: feature:912785-912811:-1:exon
so has part: feature:912533-912685:-1:exon
so has part: feature:912067-912112:-1:exon
so has part: feature:911386-911928:-1:exon

XP_030822480.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:915054-915115:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:913650-914010:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:913135-913264:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:912934-912982:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:912785-912811:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:912533-912685:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:912067-912112:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:911386-911928:-1:exon

EEF2
type: Gene
subclass of: SO_0000704
RO_0002162: 87175
gene: EEF2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(916436..925777)
location: region:916436-925777:-1
so has part: feature:916436-925777:-1:exon
subclass of: SO_0000010

115914154
type: Gene
SIO_000068: ncbigene

position:916436:-1
position: 916436
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:925777:-1
position: 925777
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:916436-925777:-1:exon

EEF2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 87175
gene: EEF2
product: eukaryotic translation elongation factor 2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 mRNAs, 177 ESTs, 33 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
transcript id: XM_030966507.1
SIO_010081: EEF2
subclass of: SO_0000673
so part of: EEF2
location: complement(join(916436..917078,917803..917935,918916..919098,919751..920104,920184..920291,920506..920764,920906..921101,921728..921866,922022..922135,922400..922505,922778..922956,923619..923830,923914..924095,924816..925030,925637..925777))
location: region:916436-925777:-1
so has part: feature:925637-925777:-1:exon
so has part: feature:924816-925030:-1:exon
so has part: feature:923914-924095:-1:exon
so has part: feature:923619-923830:-1:exon
so has part: feature:922778-922956:-1:exon
so has part: feature:922400-922505:-1:exon
so has part: feature:922022-922135:-1:exon
so has part: feature:921728-921866:-1:exon
so has part: feature:920906-921101:-1:exon
so has part: feature:920506-920764:-1:exon
so has part: feature:920184-920291:-1:exon
so has part: feature:919751-920104:-1:exon
so has part: feature:918916-919098:-1:exon
so has part: feature:917803-917935:-1:exon
so has part: feature:916436-917078:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:925637-925777:-1:exon

position:925637:-1
position: 925637
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:924816-925030:-1:exon

position:924816:-1
position: 924816
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:925030:-1
position: 925030
reference: sequence
type: ReverseStrandPosition
type: ExactPosition