Camarhynchus parvulus chromosome 27, STF_HiC, whole genome shotgun sequence.
type: Entry
definition: Camarhynchus parvulus chromosome 27, STF_HiC, whole genome shotgun sequence.
sequence version: NC_044597.1
sequence date: 2019-09-26
sequence: sequence
division: CON
label: NC_044597.1
type: RefSeq
SIO_000068: refseq
dblink: PRJNA566393
dblink: SAMEA5603054
keyword: WGS
keyword: RefSeq
source: Camarhynchus parvulus
organism: Camarhynchus parvulus
taxonomy: Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Passeriformes; Thraupidae; Camarhynchus.
comment: REFSEQ INFORMATION: The reference sequence is identical to\nLR595722.1.\nAssembly name: STF_HiC\nThe genomic sequence for this RefSeq record is from the\nwhole-genome assembly released by the UPPSALA UNIVERISTY on\n2019/09/06. The original whole-genome shotgun project has the\naccession CABFNF000000000.1.\n\n##Genome-Annotation-Data-START##\nAnnotation Provider :: NCBI\nAnnotation Status :: Full annotation\nAnnotation Name :: Camarhynchus parvulus Annotation\n Release 100\nAnnotation Version :: 100\nAnnotation Pipeline :: NCBI eukaryotic genome annotation\n pipeline\nAnnotation Software Version :: 8.2\nAnnotation Method :: Best-placed RefSeq; Gnomon\nFeatures Annotated :: Gene; mRNA; CDS; ncRNA\n##Genome-Annotation-Data-END##

sequence
subclass of: SO_0000340
sequence length: 5764500
topology: linear
so has quality: SO_0000987
location: 1..5764500
location: region:1-5764500:1
RO_0002162: 87175

NC_044597
type: RefSeq
SIO_000068: refseq

PRJNA566393
type: BioProject
SIO_000068: bioproject

SAMEA5603054
type: BioSample
SIO_000068: biosample

position:1:1
position: 1
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5764500:1
position: 5764500
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

feature:1-5764500:1:source
so part of: sequence
organism: Camarhynchus parvulus
mol type: genomic DNA
chromosome: 27

87175
type: Taxonomy
SIO_000068: taxonomy

MRC2
type: Gene
subclass of: SO_0000704
RO_0002162: 87175
gene: MRC2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(28909..64299)
location: region:28909-64299:-1
so has part: feature:28909-64299:-1:exon
subclass of: SO_0000010

115914012
type: Gene
SIO_000068: ncbigene

position:28909:-1
position: 28909
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:64299:-1
position: 64299
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:28909-64299:-1:exon

MRC2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 87175
gene: MRC2
product: mannose receptor C type 2, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, 14 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XM_030966353.1
SIO_010081: MRC2
subclass of: SO_0000673
so part of: MRC2
location: complement(join(28909..31576,38972..38998,39410..39589,40076..40195,40473..40622,40796..40964,41052..41290,41741..41849,42064..42227,42308..42422,42834..42979,43081..43181,43441..43508,43823..43983,44480..44515,44758..44896,44985..45087,45555..45697,45918..46135,46252..46400,46524..46639,48924..49031,49295..49449,50205..50393,50899..51042,51749..51862,52035..52199,52381..52554,52830..53228,64086..64298))
location: region:28909-64298:-1
so has part: feature:64086-64298:-1:exon
so has part: feature:52830-53228:-1:exon
so has part: feature:52381-52554:-1:exon
so has part: feature:52035-52199:-1:exon
so has part: feature:51749-51862:-1:exon
so has part: feature:50899-51042:-1:exon
so has part: feature:50205-50393:-1:exon
so has part: feature:49295-49449:-1:exon
so has part: feature:48924-49031:-1:exon
so has part: feature:46524-46639:-1:exon
so has part: feature:46252-46400:-1:exon
so has part: feature:45918-46135:-1:exon
so has part: feature:45555-45697:-1:exon
so has part: feature:44985-45087:-1:exon
so has part: feature:44758-44896:-1:exon
so has part: feature:44480-44515:-1:exon
so has part: feature:43823-43983:-1:exon
so has part: feature:43441-43508:-1:exon
so has part: feature:43081-43181:-1:exon
so has part: feature:42834-42979:-1:exon
so has part: feature:42308-42422:-1:exon
so has part: feature:42064-42227:-1:exon
so has part: feature:41741-41849:-1:exon
so has part: feature:41052-41290:-1:exon
so has part: feature:40796-40964:-1:exon
so has part: feature:40473-40622:-1:exon
so has part: feature:40076-40195:-1:exon
so has part: feature:39410-39589:-1:exon
so has part: feature:38972-38998:-1:exon
so has part: feature:28909-31576:-1:exon

position:64298:-1
position: 64298
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:64086-64298:-1:exon

position:64086:-1
position: 64086
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:52830-53228:-1:exon

position:52830:-1
position: 52830
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:53228:-1
position: 53228
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:52381-52554:-1:exon

position:52381:-1
position: 52381
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:52554:-1
position: 52554
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:52035-52199:-1:exon

position:52035:-1
position: 52035
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:52199:-1
position: 52199
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:51749-51862:-1:exon

position:51749:-1
position: 51749
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:51862:-1
position: 51862
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:50899-51042:-1:exon

position:50899:-1
position: 50899
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:51042:-1
position: 51042
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:50205-50393:-1:exon

position:50205:-1
position: 50205
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:50393:-1
position: 50393
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:49295-49449:-1:exon

position:49295:-1
position: 49295
reference: sequence
type: ReverseStrandPosition
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position:49449:-1
position: 49449
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:48924-49031:-1:exon

position:48924:-1
position: 48924
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:49031:-1
position: 49031
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:46524-46639:-1:exon

position:46524:-1
position: 46524
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:46639:-1
position: 46639
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:46252-46400:-1:exon

position:46252:-1
position: 46252
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:46400:-1
position: 46400
reference: sequence
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urn:…
SIO_000300: 12
SIO_000628: feature:45918-46135:-1:exon

position:45918:-1
position: 45918
reference: sequence
type: ReverseStrandPosition
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position:46135:-1
position: 46135
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:45555-45697:-1:exon

position:45555:-1
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reference: sequence
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position:45697:-1
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reference: sequence
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urn:…
SIO_000300: 14
SIO_000628: feature:44985-45087:-1:exon

position:44985:-1
position: 44985
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:45087:-1
position: 45087
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:44758-44896:-1:exon

position:44758:-1
position: 44758
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:44896:-1
position: 44896
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:44480-44515:-1:exon

position:44480:-1
position: 44480
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:44515:-1
position: 44515
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:43823-43983:-1:exon

position:43823:-1
position: 43823
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:43983:-1
position: 43983
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:43441-43508:-1:exon

position:43441:-1
position: 43441
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:43508:-1
position: 43508
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:43081-43181:-1:exon

position:43081:-1
position: 43081
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:43181:-1
position: 43181
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:42834-42979:-1:exon

position:42834:-1
position: 42834
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:42979:-1
position: 42979
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:42308-42422:-1:exon

position:42308:-1
position: 42308
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:42422:-1
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reference: sequence
type: ReverseStrandPosition
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urn:…
SIO_000300: 22
SIO_000628: feature:42064-42227:-1:exon

position:42064:-1
position: 42064
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:42227:-1
position: 42227
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 23
SIO_000628: feature:41741-41849:-1:exon

position:41741:-1
position: 41741
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:41849:-1
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reference: sequence
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urn:…
SIO_000300: 24
SIO_000628: feature:41052-41290:-1:exon

position:41052:-1
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type: ReverseStrandPosition
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position:41290:-1
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reference: sequence
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urn:…
SIO_000300: 25
SIO_000628: feature:40796-40964:-1:exon

position:40796:-1
position: 40796
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:40964:-1
position: 40964
reference: sequence
type: ReverseStrandPosition
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urn:…
SIO_000300: 26
SIO_000628: feature:40473-40622:-1:exon

position:40473:-1
position: 40473
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:40622:-1
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reference: sequence
type: ReverseStrandPosition
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urn:…
SIO_000300: 27
SIO_000628: feature:40076-40195:-1:exon

position:40076:-1
position: 40076
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:40195:-1
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reference: sequence
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type: ExactPosition

urn:…
SIO_000300: 28
SIO_000628: feature:39410-39589:-1:exon

position:39410:-1
position: 39410
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:39589:-1
position: 39589
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 29
SIO_000628: feature:38972-38998:-1:exon

position:38972:-1
position: 38972
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:38998:-1
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reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 30
SIO_000628: feature:28909-31576:-1:exon

position:31576:-1
position: 31576
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

MRC2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 87175
gene: MRC2
product: mannose receptor C type 2, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_030966354.1
SIO_010081: MRC2
subclass of: SO_0000673
so part of: MRC2
location: complement(join(31356..31576,38972..38998,39410..39589,40076..40195,40473..40622,40796..40964,41052..41290,41741..41849,42064..42227,42308..42422,42834..42979,43081..43181,43441..43508,43823..43983,44480..44515,44758..44896,44985..45087,45555..45697,45918..46135,46252..46400,46524..46639,48924..49031,49295..49449,50205..50393,50899..51042,51749..51862,52035..52199,52830..53228,64086..64299))
location: region:31356-64299:-1
so has part: feature:64086-64299:-1:exon
so has part: feature:52830-53228:-1:exon
so has part: feature:52035-52199:-1:exon
so has part: feature:51749-51862:-1:exon
so has part: feature:50899-51042:-1:exon
so has part: feature:50205-50393:-1:exon
so has part: feature:49295-49449:-1:exon
so has part: feature:48924-49031:-1:exon
so has part: feature:46524-46639:-1:exon
so has part: feature:46252-46400:-1:exon
so has part: feature:45918-46135:-1:exon
so has part: feature:45555-45697:-1:exon
so has part: feature:44985-45087:-1:exon
so has part: feature:44758-44896:-1:exon
so has part: feature:44480-44515:-1:exon
so has part: feature:43823-43983:-1:exon
so has part: feature:43441-43508:-1:exon
so has part: feature:43081-43181:-1:exon
so has part: feature:42834-42979:-1:exon
so has part: feature:42308-42422:-1:exon
so has part: feature:42064-42227:-1:exon
so has part: feature:41741-41849:-1:exon
so has part: feature:41052-41290:-1:exon
so has part: feature:40796-40964:-1:exon
so has part: feature:40473-40622:-1:exon
so has part: feature:40076-40195:-1:exon
so has part: feature:39410-39589:-1:exon
so has part: feature:38972-38998:-1:exon
so has part: feature:31356-31576:-1:exon

position:31356:-1
position: 31356
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:64086-64299:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:52830-53228:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:52035-52199:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:51749-51862:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:50899-51042:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:50205-50393:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:49295-49449:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:48924-49031:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:46524-46639:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:46252-46400:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:45918-46135:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:45555-45697:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:44985-45087:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:44758-44896:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:44480-44515:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:43823-43983:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:43441-43508:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:43081-43181:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:42834-42979:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:42308-42422:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:42064-42227:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:41741-41849:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:41052-41290:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:40796-40964:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:40473-40622:-1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:40076-40195:-1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:39410-39589:-1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:38972-38998:-1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:31356-31576:-1:exon

MRC2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 87175
gene: MRC2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: C-type mannose receptor 2 isoform X2
translation: MGRGSAGPRSVCSSLCPPLRGPLCCLLGLQLVLGAAHPDSKVFLIYNTGTQGCLETKDSLVRLAKGCNTSSPAQEWKWVSRNRLFNVGAMQCLGVSWHGTNATAGLRLLATYECDRESVNMRWSCRGLGEQLSQHLGARLGNSSLDRGDQVHGSQWRTYGTEEDLCSMSYSGNDCETFWDKDHLTNSCYQFNFQSTLSWQEAWNSCEQQGANLLSITEIHEQTYINGLLTGYSSTLWIGLNDLDINGGWQWSDNSPLKYLNWENDQPDNPSEENCGVIRTESSGGWQNRDCGIALPYVCKKKPNATADPFLTDSWSEVKVDCEPSWQPFQSNCYRLVGEKKSWQEAKKTCLRSGGDLVSIHTLSELEFVTKEIKQDVEELWIGLNDLKLQMNFEWSDGTPVRFTYWHPFEPNNFRDSLEDCVTIWGPEGRWNDSPCNQTLPSICKKPGRVSQEKEEDDHGCRKGWKWHSPSCFWLGEDRVPYSDARKMCSDYSSTLVTITSRFEQAYVSSLIYGWDGEYFWTALQDINETGAFHWLSGDEVTYTHWNRNQPGYNKGGCVALATGSSMGLWEVKNCSTFKAKYICRQNLGTPVNPELPSPFPTPSLTATCPPGWSSNPKLRHCYKVFNFEKLQEKKTWIAAQEFCRELGAQLLSLGSYEEEHFVANTLNKIFGESEPELHEQHWFWIGLNRRDPAGDQSWRWSDGLGFFYHNFDRSNYDDDDIRSCTVLDLASLQWMPMQCEAQLDWICKLPKGVDVKELEITTQGSKEWVKYQEAEYKFFEHHSTWLQAKRICSWFQAELTSVHSKAELHFLGQNLKKFSRGQEQHWWIGLQTYENDGRFKWSDGSLLNFVSWAPGKPRPISKDRKCVYMTASREDWGDQKCMTALPYICKRSNGTAVKPSLFPVPAATSGGCPQGWLPFLSKCFSFNGHNKGEIVKWPEAKQLCENQGGILATIDSPLEQAFITSMLPNISLDLWIGLHDAQGEFQWVEGEPLRHVSWAPGEPSGCSSSSPNDKPTNCVVVWHGSPPLFTGRWDDRSCLEEKHGYVCQRSIDPSLSPVQAPFPPSPTGTLFYHNSTYRILQKPLRWHEALLLCETLNATLATISNPYSQAFLTQAITSLQTPLWIGLANDEGGRSYLWLTEENLIYTNWQDGEPQQITGCSYMDMDGSWRTAGCNTRLQGAICQFQTGHPRMHKWTYSGSCPKSLEDSSWIPFRDHCYTFHMEITLGQKDAMKRCQKVGGTVLSIQDEMENVFVWEHLQAYEGLSKGAWLGMTFNPKGGTLVWHDNSAVNYSNWGQHDTGPSMLSQNSCYWIQSSNGVWRLGSCTNVTMGVICKIPRVEESSFSRAALPENTTAIAVVVLSTLALCTVLGVVVFLYKRRQSAEQGAFESARYSRTTSNPSESAEKNILVSDMEMNEQQD
SIO_010081: MRC2
subclass of: SO_0000673
so part of: MRC2
location: complement(join(31356..31576,38972..38998,39410..39589,40076..40195,40473..40622,40796..40964,41052..41290,41741..41849,42064..42227,42308..42422,42834..42979,43081..43181,43441..43508,43823..43983,44480..44515,44758..44896,44985..45087,45555..45697,45918..46135,46252..46400,46524..46639,48924..49031,49295..49449,50205..50393,50899..51042,51749..51862,52035..52199,52830..53228,64086..64200))
location: region:31356-64200:-1
so has part: feature:64086-64200:-1:exon
so has part: feature:52830-53228:-1:exon
so has part: feature:52035-52199:-1:exon
so has part: feature:51749-51862:-1:exon
so has part: feature:50899-51042:-1:exon
so has part: feature:50205-50393:-1:exon
so has part: feature:49295-49449:-1:exon
so has part: feature:48924-49031:-1:exon
so has part: feature:46524-46639:-1:exon
so has part: feature:46252-46400:-1:exon
so has part: feature:45918-46135:-1:exon
so has part: feature:45555-45697:-1:exon
so has part: feature:44985-45087:-1:exon
so has part: feature:44758-44896:-1:exon
so has part: feature:44480-44515:-1:exon
so has part: feature:43823-43983:-1:exon
so has part: feature:43441-43508:-1:exon
so has part: feature:43081-43181:-1:exon
so has part: feature:42834-42979:-1:exon
so has part: feature:42308-42422:-1:exon
so has part: feature:42064-42227:-1:exon
so has part: feature:41741-41849:-1:exon
so has part: feature:41052-41290:-1:exon
so has part: feature:40796-40964:-1:exon
so has part: feature:40473-40622:-1:exon
so has part: feature:40076-40195:-1:exon
so has part: feature:39410-39589:-1:exon
so has part: feature:38972-38998:-1:exon
so has part: feature:31356-31576:-1:exon

XP_030822214.1
type: Protein
SIO_000068: ncbiprotein

position:64200:-1
position: 64200
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:64086-64200:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:52830-53228:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:52035-52199:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:51749-51862:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:50899-51042:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:50205-50393:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:49295-49449:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:48924-49031:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:46524-46639:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:46252-46400:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:45918-46135:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:45555-45697:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:44985-45087:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:44758-44896:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:44480-44515:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:43823-43983:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:43441-43508:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:43081-43181:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:42834-42979:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:42308-42422:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:42064-42227:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:41741-41849:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:41052-41290:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:40796-40964:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:40473-40622:-1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:40076-40195:-1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:39410-39589:-1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:38972-38998:-1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:31356-31576:-1:exon

MRC2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 87175
gene: MRC2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: C-type mannose receptor 2 isoform X1
translation: MGRGSAGPRSVCSSLCPPLRGPLCCLLGLQLVLGAAHPDSKVFLIYNTGTQGCLETKDSLVRLAKGCNTSSPAQEWKWVSRNRLFNVGAMQCLGVSWHGTNATAGLRLLATYECDRESVNMRWSCRGLGEQLSQHLGARLGNSSLDRGDQVHGSQWRTYGTEEDLCSMSYSEIYTIQGNSHGKPCTIPFKYDNQWFHECTSTGREDGHLWCATTQDYGKDERWGFCPIKSNDCETFWDKDHLTNSCYQFNFQSTLSWQEAWNSCEQQGANLLSITEIHEQTYINGLLTGYSSTLWIGLNDLDINGGWQWSDNSPLKYLNWENDQPDNPSEENCGVIRTESSGGWQNRDCGIALPYVCKKKPNATADPFLTDSWSEVKVDCEPSWQPFQSNCYRLVGEKKSWQEAKKTCLRSGGDLVSIHTLSELEFVTKEIKQDVEELWIGLNDLKLQMNFEWSDGTPVRFTYWHPFEPNNFRDSLEDCVTIWGPEGRWNDSPCNQTLPSICKKPGRVSQEKEEDDHGCRKGWKWHSPSCFWLGEDRVPYSDARKMCSDYSSTLVTITSRFEQAYVSSLIYGWDGEYFWTALQDINETGAFHWLSGDEVTYTHWNRNQPGYNKGGCVALATGSSMGLWEVKNCSTFKAKYICRQNLGTPVNPELPSPFPTPSLTATCPPGWSSNPKLRHCYKVFNFEKLQEKKTWIAAQEFCRELGAQLLSLGSYEEEHFVANTLNKIFGESEPELHEQHWFWIGLNRRDPAGDQSWRWSDGLGFFYHNFDRSNYDDDDIRSCTVLDLASLQWMPMQCEAQLDWICKLPKGVDVKELEITTQGSKEWVKYQEAEYKFFEHHSTWLQAKRICSWFQAELTSVHSKAELHFLGQNLKKFSRGQEQHWWIGLQTYENDGRFKWSDGSLLNFVSWAPGKPRPISKDRKCVYMTASREDWGDQKCMTALPYICKRSNGTAVKPSLFPVPAATSGGCPQGWLPFLSKCFSFNGHNKGEIVKWPEAKQLCENQGGILATIDSPLEQAFITSMLPNISLDLWIGLHDAQGEFQWVEGEPLRHVSWAPGEPSGCSSSSPNDKPTNCVVVWHGSPPLFTGRWDDRSCLEEKHGYVCQRSIDPSLSPVQAPFPPSPTGTLFYHNSTYRILQKPLRWHEALLLCETLNATLATISNPYSQAFLTQAITSLQTPLWIGLANDEGGRSYLWLTEENLIYTNWQDGEPQQITGCSYMDMDGSWRTAGCNTRLQGAICQFQTGHPRMHKWTYSGSCPKSLEDSSWIPFRDHCYTFHMEITLGQKDAMKRCQKVGGTVLSIQDEMENVFVWEHLQAYEGLSKGAWLGMTFNPKGGTLVWHDNSAVNYSNWGQHDTGPSMLSQNSCYWIQSSNGVWRLGSCTNVTMGVICKIPRVEESSFSRAALPENTTAIAVVVLSTLALCTVLGVVVFLYKRRQSAEQGAFESARYSRTTSNPSESAEKNILVSDMEMNEQQD
SIO_010081: MRC2
subclass of: SO_0000673
so part of: MRC2
location: complement(join(31356..31576,38972..38998,39410..39589,40076..40195,40473..40622,40796..40964,41052..41290,41741..41849,42064..42227,42308..42422,42834..42979,43081..43181,43441..43508,43823..43983,44480..44515,44758..44896,44985..45087,45555..45697,45918..46135,46252..46400,46524..46639,48924..49031,49295..49449,50205..50393,50899..51042,51749..51862,52035..52199,52381..52554,52830..53228,64086..64200))
location: region:31356-64200:-1
so has part: feature:64086-64200:-1:exon
so has part: feature:52830-53228:-1:exon
so has part: feature:52381-52554:-1:exon
so has part: feature:52035-52199:-1:exon
so has part: feature:51749-51862:-1:exon
so has part: feature:50899-51042:-1:exon
so has part: feature:50205-50393:-1:exon
so has part: feature:49295-49449:-1:exon
so has part: feature:48924-49031:-1:exon
so has part: feature:46524-46639:-1:exon
so has part: feature:46252-46400:-1:exon
so has part: feature:45918-46135:-1:exon
so has part: feature:45555-45697:-1:exon
so has part: feature:44985-45087:-1:exon
so has part: feature:44758-44896:-1:exon
so has part: feature:44480-44515:-1:exon
so has part: feature:43823-43983:-1:exon
so has part: feature:43441-43508:-1:exon
so has part: feature:43081-43181:-1:exon
so has part: feature:42834-42979:-1:exon
so has part: feature:42308-42422:-1:exon
so has part: feature:42064-42227:-1:exon
so has part: feature:41741-41849:-1:exon
so has part: feature:41052-41290:-1:exon
so has part: feature:40796-40964:-1:exon
so has part: feature:40473-40622:-1:exon
so has part: feature:40076-40195:-1:exon
so has part: feature:39410-39589:-1:exon
so has part: feature:38972-38998:-1:exon
so has part: feature:31356-31576:-1:exon

XP_030822213.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:64086-64200:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:52830-53228:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:52381-52554:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:52035-52199:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:51749-51862:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:50899-51042:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:50205-50393:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:49295-49449:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:48924-49031:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:46524-46639:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:46252-46400:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:45918-46135:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:45555-45697:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:44985-45087:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:44758-44896:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:44480-44515:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:43823-43983:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:43441-43508:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:43081-43181:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:42834-42979:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:42308-42422:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:42064-42227:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:41741-41849:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:41052-41290:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:40796-40964:-1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:40473-40622:-1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:40076-40195:-1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:39410-39589:-1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:38972-38998:-1:exon

urn:…
SIO_000300: 30
SIO_000628: feature:31356-31576:-1:exon

TLK2
type: Gene
subclass of: SO_0000704
RO_0002162: 87175
gene: TLK2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(73816..114825)
location: region:73816-114825:-1
so has part: feature:73816-114825:-1:exon
subclass of: SO_0000010

115914001
type: Gene
SIO_000068: ncbigene

position:73816:-1
position: 73816
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:114825:-1
position: 114825
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:73816-114825:-1:exon

TLK2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 87175
gene: TLK2
product: tousled like kinase 2, transcript variant X5
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 14 ESTs, 6 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XM_030966338.1
SIO_010081: TLK2
subclass of: SO_0000673
so part of: TLK2
location: complement(join(73816..74258,74735..74842,75752..75863,76935..77073,78504..78673,79149..79238,80284..80375,82040..82121,82501..82598,84439..84505,88306..88458,89839..89975,91217..91327,92897..92989,99268..99363,100445..100488,101509..101578,103977..104048,110656..110721,112458..112546,114372..114825))
location: region:73816-114825:-1
so has part: feature:114372-114825:-1:exon
so has part: feature:112458-112546:-1:exon
so has part: feature:110656-110721:-1:exon
so has part: feature:103977-104048:-1:exon
so has part: feature:101509-101578:-1:exon
so has part: feature:100445-100488:-1:exon
so has part: feature:99268-99363:-1:exon
so has part: feature:92897-92989:-1:exon
so has part: feature:91217-91327:-1:exon
so has part: feature:89839-89975:-1:exon
so has part: feature:88306-88458:-1:exon
so has part: feature:84439-84505:-1:exon
so has part: feature:82501-82598:-1:exon
so has part: feature:82040-82121:-1:exon
so has part: feature:80284-80375:-1:exon
so has part: feature:79149-79238:-1:exon
so has part: feature:78504-78673:-1:exon
so has part: feature:76935-77073:-1:exon
so has part: feature:75752-75863:-1:exon
so has part: feature:74735-74842:-1:exon
so has part: feature:73816-74258:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:114372-114825:-1:exon

position:114372:-1
position: 114372
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:112458-112546:-1:exon

position:112458:-1
position: 112458
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:112546:-1
position: 112546
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:110656-110721:-1:exon

position:110656:-1
position: 110656
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:110721:-1
position: 110721
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:103977-104048:-1:exon

position:103977:-1
position: 103977
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:104048:-1
position: 104048
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:101509-101578:-1:exon

position:101509:-1
position: 101509
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:101578:-1
position: 101578
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:100445-100488:-1:exon

position:100445:-1
position: 100445
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:100488:-1
position: 100488
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:99268-99363:-1:exon

position:99268:-1
position: 99268
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:99363:-1
position: 99363
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:92897-92989:-1:exon

position:92897:-1
position: 92897
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:92989:-1
position: 92989
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:91217-91327:-1:exon

position:91217:-1
position: 91217
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:91327:-1
position: 91327
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:89839-89975:-1:exon

position:89839:-1
position: 89839
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:89975:-1
position: 89975
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:88306-88458:-1:exon

position:88306:-1
position: 88306
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:88458:-1
position: 88458
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:84439-84505:-1:exon

position:84439:-1
position: 84439
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:84505:-1
position: 84505
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:82501-82598:-1:exon

position:82501:-1
position: 82501
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:82598:-1
position: 82598
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:82040-82121:-1:exon

position:82040:-1
position: 82040
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:82121:-1
position: 82121
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:80284-80375:-1:exon

position:80284:-1
position: 80284
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:80375:-1
position: 80375
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:79149-79238:-1:exon

position:79149:-1
position: 79149
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:79238:-1
position: 79238
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:78504-78673:-1:exon

position:78504:-1
position: 78504
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:78673:-1
position: 78673
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:76935-77073:-1:exon

position:76935:-1
position: 76935
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:77073:-1
position: 77073
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:75752-75863:-1:exon

position:75752:-1
position: 75752
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:75863:-1
position: 75863
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:74735-74842:-1:exon

position:74735:-1
position: 74735
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:74842:-1
position: 74842
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:73816-74258:-1:exon

position:74258:-1
position: 74258
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

TLK2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 87175
gene: TLK2
product: tousled like kinase 2, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 15 ESTs, 7 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_030966337.1
SIO_010081: TLK2
subclass of: SO_0000673
so part of: TLK2
location: complement(join(73816..74258,74735..74842,75752..75863,76935..77073,78504..78673,79149..79238,80284..80375,82040..82121,82501..82598,84439..84505,88306..88458,89839..89975,91217..91327,92897..92989,95814..95909,99268..99363,100445..100488,101509..101578,103977..104048,110656..110721,112458..112546,114372..114825))
location: region:73816-114825:-1
so has part: feature:114372-114825:-1:exon
so has part: feature:112458-112546:-1:exon
so has part: feature:110656-110721:-1:exon
so has part: feature:103977-104048:-1:exon
so has part: feature:101509-101578:-1:exon
so has part: feature:100445-100488:-1:exon
so has part: feature:99268-99363:-1:exon
so has part: feature:95814-95909:-1:exon
so has part: feature:92897-92989:-1:exon
so has part: feature:91217-91327:-1:exon
so has part: feature:89839-89975:-1:exon
so has part: feature:88306-88458:-1:exon
so has part: feature:84439-84505:-1:exon
so has part: feature:82501-82598:-1:exon
so has part: feature:82040-82121:-1:exon
so has part: feature:80284-80375:-1:exon
so has part: feature:79149-79238:-1:exon
so has part: feature:78504-78673:-1:exon
so has part: feature:76935-77073:-1:exon
so has part: feature:75752-75863:-1:exon
so has part: feature:74735-74842:-1:exon
so has part: feature:73816-74258:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:114372-114825:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:112458-112546:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:110656-110721:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:103977-104048:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:101509-101578:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:100445-100488:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:99268-99363:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:95814-95909:-1:exon

position:95814:-1
position: 95814
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:95909:-1
position: 95909
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:92897-92989:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:91217-91327:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:89839-89975:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:88306-88458:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:84439-84505:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:82501-82598:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:82040-82121:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:80284-80375:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:79149-79238:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:78504-78673:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:76935-77073:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:75752-75863:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:74735-74842:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:73816-74258:-1:exon

TLK2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 87175
gene: TLK2
product: tousled like kinase 2, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 10 ESTs, 14 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XM_030966336.1
SIO_010081: TLK2
subclass of: SO_0000673
so part of: TLK2
location: complement(join(73816..74258,74735..74842,75752..75863,76935..77073,78504..78673,79149..79238,80284..80375,82040..82121,82501..82598,84439..84505,88306..88458,89839..89975,91217..91327,92897..92989,95814..95909,96466..96633,99268..99363,100445..100488,101509..101578,103977..104048,112458..112546,114372..114823))
location: region:73816-114823:-1
so has part: feature:114372-114823:-1:exon
so has part: feature:112458-112546:-1:exon
so has part: feature:103977-104048:-1:exon
so has part: feature:101509-101578:-1:exon
so has part: feature:100445-100488:-1:exon
so has part: feature:99268-99363:-1:exon
so has part: feature:96466-96633:-1:exon
so has part: feature:95814-95909:-1:exon
so has part: feature:92897-92989:-1:exon
so has part: feature:91217-91327:-1:exon
so has part: feature:89839-89975:-1:exon
so has part: feature:88306-88458:-1:exon
so has part: feature:84439-84505:-1:exon
so has part: feature:82501-82598:-1:exon
so has part: feature:82040-82121:-1:exon
so has part: feature:80284-80375:-1:exon
so has part: feature:79149-79238:-1:exon
so has part: feature:78504-78673:-1:exon
so has part: feature:76935-77073:-1:exon
so has part: feature:75752-75863:-1:exon
so has part: feature:74735-74842:-1:exon
so has part: feature:73816-74258:-1:exon

position:114823:-1
position: 114823
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:114372-114823:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:112458-112546:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:103977-104048:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:101509-101578:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:100445-100488:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:99268-99363:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:96466-96633:-1:exon

position:96466:-1
position: 96466
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:96633:-1
position: 96633
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:95814-95909:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:92897-92989:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:91217-91327:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:89839-89975:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:88306-88458:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:84439-84505:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:82501-82598:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:82040-82121:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:80284-80375:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:79149-79238:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:78504-78673:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:76935-77073:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:75752-75863:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:74735-74842:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:73816-74258:-1:exon

TLK2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 87175
gene: TLK2
product: tousled like kinase 2, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 15 ESTs, 8 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XM_030966334.1
SIO_010081: TLK2
subclass of: SO_0000673
so part of: TLK2
location: complement(join(73816..74258,74735..74842,75752..75863,76935..77073,78504..78673,79149..79238,80284..80375,82040..82121,82501..82598,84439..84505,88306..88458,89839..89975,91217..91327,92897..92989,95814..95909,96466..96633,99268..99363,100445..100488,101509..101578,103977..104048,110656..110721,112458..112546,114372..114823))
location: region:73816-114823:-1
so has part: feature:114372-114823:-1:exon
so has part: feature:112458-112546:-1:exon
so has part: feature:110656-110721:-1:exon
so has part: feature:103977-104048:-1:exon
so has part: feature:101509-101578:-1:exon
so has part: feature:100445-100488:-1:exon
so has part: feature:99268-99363:-1:exon
so has part: feature:96466-96633:-1:exon
so has part: feature:95814-95909:-1:exon
so has part: feature:92897-92989:-1:exon
so has part: feature:91217-91327:-1:exon
so has part: feature:89839-89975:-1:exon
so has part: feature:88306-88458:-1:exon
so has part: feature:84439-84505:-1:exon
so has part: feature:82501-82598:-1:exon
so has part: feature:82040-82121:-1:exon
so has part: feature:80284-80375:-1:exon
so has part: feature:79149-79238:-1:exon
so has part: feature:78504-78673:-1:exon
so has part: feature:76935-77073:-1:exon
so has part: feature:75752-75863:-1:exon
so has part: feature:74735-74842:-1:exon
so has part: feature:73816-74258:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:114372-114823:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:112458-112546:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:110656-110721:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:103977-104048:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:101509-101578:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:100445-100488:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:99268-99363:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:96466-96633:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:95814-95909:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:92897-92989:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:91217-91327:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:89839-89975:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:88306-88458:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:84439-84505:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:82501-82598:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:82040-82121:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:80284-80375:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:79149-79238:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:78504-78673:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:76935-77073:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:75752-75863:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:74735-74842:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:73816-74258:-1:exon

TLK2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 87175
gene: TLK2
product: tousled like kinase 2, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 15 ESTs, 8 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_030966335.1
SIO_010081: TLK2
subclass of: SO_0000673
so part of: TLK2
location: complement(join(73816..74258,74735..74842,75752..75863,76935..77073,78504..78673,79149..79238,80284..80375,82040..82121,82501..82598,84439..84505,88306..88458,89839..89975,91217..91327,92897..92989,95814..95909,96466..96633,99268..99363,100445..100488,101509..101578,103977..104048,110656..110721,112458..112546,112938..113015,114372..114823))
location: region:73816-114823:-1
so has part: feature:114372-114823:-1:exon
so has part: feature:112938-113015:-1:exon
so has part: feature:112458-112546:-1:exon
so has part: feature:110656-110721:-1:exon
so has part: feature:103977-104048:-1:exon
so has part: feature:101509-101578:-1:exon
so has part: feature:100445-100488:-1:exon
so has part: feature:99268-99363:-1:exon
so has part: feature:96466-96633:-1:exon
so has part: feature:95814-95909:-1:exon
so has part: feature:92897-92989:-1:exon
so has part: feature:91217-91327:-1:exon
so has part: feature:89839-89975:-1:exon
so has part: feature:88306-88458:-1:exon
so has part: feature:84439-84505:-1:exon
so has part: feature:82501-82598:-1:exon
so has part: feature:82040-82121:-1:exon
so has part: feature:80284-80375:-1:exon
so has part: feature:79149-79238:-1:exon
so has part: feature:78504-78673:-1:exon
so has part: feature:76935-77073:-1:exon
so has part: feature:75752-75863:-1:exon
so has part: feature:74735-74842:-1:exon
so has part: feature:73816-74258:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:114372-114823:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:112938-113015:-1:exon

position:112938:-1
position: 112938
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:113015:-1
position: 113015
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:112458-112546:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:110656-110721:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:103977-104048:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:101509-101578:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:100445-100488:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:99268-99363:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:96466-96633:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:95814-95909:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:92897-92989:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:91217-91327:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:89839-89975:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:88306-88458:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:84439-84505:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:82501-82598:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:82040-82121:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:80284-80375:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:79149-79238:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:78504-78673:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:76935-77073:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:75752-75863:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:74735-74842:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:73816-74258:-1:exon

TLK2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 87175
gene: TLK2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: serine/threonine-protein kinase tousled-like 2 isoform X2
translation: MMEELHSLDPRRQELLEARFTGVGVAKGPLNSESSNQSLCSVGSLSDKELETPEKKQNDQRNRKRKAEAYETSQGKGTPRGHKISDYFEFAGGSGPGTSPGRSVPPVARSSPQHSLSNPLPRRMEQPLYGVDGSAAKEPQEEHSALPTLMSVMLAKQRLENEQLAQRGGGLCFTFVSAQQGSPSSTGSGNTEHSCTSQKQISIQHKQSQSDLTMEKISALENSKNSDLEKKEGRIDDLLRANCDLRRQIDEQQKMLEKYKERLNRCVTMSKKLLIEKSKQEKMACRDKSMQDRLRLGHFTTVRHGASFTEQWTDGYAFQNLIKQQERINSQREEIERQRKMLAKRKPPAMGQTPPASTEQKQRKSKTNGAENETLTLAEYHEQEEIFKLRLGHLKKEEAEIQAELERLERVRNLHIRELKRIHNEDNSQFKDHPTLNDRYLLLHLLGRGGFSEVYKAFDLTEQRYVAVKIHQLNKNWRDEKKENYHKHACREYRIHKELDHPRIVKLYDYFSLDTDSFCTVLEYCEGNDLDFYLKQHKLMSEKEARSIIMQIVNALKYLNEIKPPIIHYDLKPGNILLVNGTACGEIKITDFGLSKIMDDDSYNSVDGMELTSQGAGTYWYLPPECFVVGKEPPKISNKVDVWSVGVIFYQCLYGRKPFGHNQSQQDILQENTILKATEVQFPPKPVVTPEAKAFIRRCLAYRKEDRIDVQQLACDPYLLPHIRKSVSTSSPAGAAIASTSGSSNNSSSN
SIO_010081: TLK2
subclass of: SO_0000673
so part of: TLK2
location: complement(join(74085..74258,74735..74842,75752..75863,76935..77073,78504..78673,79149..79238,80284..80375,82040..82121,82501..82598,84439..84505,88306..88458,89839..89975,91217..91327,92897..92989,95814..95909,96466..96633,99268..99363,100445..100488,101509..101578,103977..104048,112458..112538))
location: region:74085-112538:-1
so has part: feature:112458-112538:-1:exon
so has part: feature:103977-104048:-1:exon
so has part: feature:101509-101578:-1:exon
so has part: feature:100445-100488:-1:exon
so has part: feature:99268-99363:-1:exon
so has part: feature:96466-96633:-1:exon
so has part: feature:95814-95909:-1:exon
so has part: feature:92897-92989:-1:exon
so has part: feature:91217-91327:-1:exon
so has part: feature:89839-89975:-1:exon
so has part: feature:88306-88458:-1:exon
so has part: feature:84439-84505:-1:exon
so has part: feature:82501-82598:-1:exon
so has part: feature:82040-82121:-1:exon
so has part: feature:80284-80375:-1:exon
so has part: feature:79149-79238:-1:exon
so has part: feature:78504-78673:-1:exon
so has part: feature:76935-77073:-1:exon
so has part: feature:75752-75863:-1:exon
so has part: feature:74735-74842:-1:exon
so has part: feature:74085-74258:-1:exon

XP_030822196.1
type: Protein
SIO_000068: ncbiprotein

position:74085:-1
position: 74085
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:112538:-1
position: 112538
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:112458-112538:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:103977-104048:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:101509-101578:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:100445-100488:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:99268-99363:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:96466-96633:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:95814-95909:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:92897-92989:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:91217-91327:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:89839-89975:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:88306-88458:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:84439-84505:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:82501-82598:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:82040-82121:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:80284-80375:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:79149-79238:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:78504-78673:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:76935-77073:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:75752-75863:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:74735-74842:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:74085-74258:-1:exon

TLK2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 87175
gene: TLK2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: serine/threonine-protein kinase tousled-like 2 isoform X4
translation: MMEELHSLDPRRQELLEARFTGVGVAKVGASNSLPTPPSLRPSCSALALGPLNSESSNQSLCSVGSLSDKELETPEKKQNDQRNRKRKAEAYETSQGKGTPRGHKISDYFEFAGGSGPGTSPGRSVPPVARSSPQHSLSNPLPSDLTMEKISALENSKNSDLEKKEGRIDDLLRANCDLRRQIDEQQKMLEKYKERLNRCVTMSKKLLIEKSKQEKMACRDKSMQDRLRLGHFTTVRHGASFTEQWTDGYAFQNLIKQQERINSQREEIERQRKMLAKRKPPAMGQTPPASTEQKQRKSKTNGAENETLTLAEYHEQEEIFKLRLGHLKKEEAEIQAELERLERVRNLHIRELKRIHNEDNSQFKDHPTLNDRYLLLHLLGRGGFSEVYKAFDLTEQRYVAVKIHQLNKNWRDEKKENYHKHACREYRIHKELDHPRIVKLYDYFSLDTDSFCTVLEYCEGNDLDFYLKQHKLMSEKEARSIIMQIVNALKYLNEIKPPIIHYDLKPGNILLVNGTACGEIKITDFGLSKIMDDDSYNSVDGMELTSQGAGTYWYLPPECFVVGKEPPKISNKVDVWSVGVIFYQCLYGRKPFGHNQSQQDILQENTILKATEVQFPPKPVVTPEAKAFIRRCLAYRKEDRIDVQQLACDPYLLPHIRKSVSTSSPAGAAIASTSGSSNNSSSN
SIO_010081: TLK2
subclass of: SO_0000673
so part of: TLK2
location: complement(join(74085..74258,74735..74842,75752..75863,76935..77073,78504..78673,79149..79238,80284..80375,82040..82121,82501..82598,84439..84505,88306..88458,89839..89975,91217..91327,92897..92989,99268..99363,100445..100488,101509..101578,103977..104048,110656..110721,112458..112538))
location: region:74085-112538:-1
so has part: feature:112458-112538:-1:exon
so has part: feature:110656-110721:-1:exon
so has part: feature:103977-104048:-1:exon
so has part: feature:101509-101578:-1:exon
so has part: feature:100445-100488:-1:exon
so has part: feature:99268-99363:-1:exon
so has part: feature:92897-92989:-1:exon
so has part: feature:91217-91327:-1:exon
so has part: feature:89839-89975:-1:exon
so has part: feature:88306-88458:-1:exon
so has part: feature:84439-84505:-1:exon
so has part: feature:82501-82598:-1:exon
so has part: feature:82040-82121:-1:exon
so has part: feature:80284-80375:-1:exon
so has part: feature:79149-79238:-1:exon
so has part: feature:78504-78673:-1:exon
so has part: feature:76935-77073:-1:exon
so has part: feature:75752-75863:-1:exon
so has part: feature:74735-74842:-1:exon
so has part: feature:74085-74258:-1:exon

XP_030822198.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:112458-112538:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:110656-110721:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:103977-104048:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:101509-101578:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:100445-100488:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:99268-99363:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:92897-92989:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:91217-91327:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:89839-89975:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:88306-88458:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:84439-84505:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:82501-82598:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:82040-82121:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:80284-80375:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:79149-79238:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:78504-78673:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:76935-77073:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:75752-75863:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:74735-74842:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:74085-74258:-1:exon

TLK2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 87175
gene: TLK2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: serine/threonine-protein kinase tousled-like 2 isoform X3
translation: MMEELHSLDPRRQELLEARFTGVGVAKVGASNSLPTPPSLRPSCSALALGPLNSESSNQSLCSVGSLSDKELETPEKKQNDQRNRKRKAEAYETSQGKGTPRGHKISDYFEFAGGSGPGTSPGRSVPPVARSSPQHSLSNPLPAQQGSPSSTGSGNTEHSCTSQKQISIQHKQSQSDLTMEKISALENSKNSDLEKKEGRIDDLLRANCDLRRQIDEQQKMLEKYKERLNRCVTMSKKLLIEKSKQEKMACRDKSMQDRLRLGHFTTVRHGASFTEQWTDGYAFQNLIKQQERINSQREEIERQRKMLAKRKPPAMGQTPPASTEQKQRKSKTNGAENETLTLAEYHEQEEIFKLRLGHLKKEEAEIQAELERLERVRNLHIRELKRIHNEDNSQFKDHPTLNDRYLLLHLLGRGGFSEVYKAFDLTEQRYVAVKIHQLNKNWRDEKKENYHKHACREYRIHKELDHPRIVKLYDYFSLDTDSFCTVLEYCEGNDLDFYLKQHKLMSEKEARSIIMQIVNALKYLNEIKPPIIHYDLKPGNILLVNGTACGEIKITDFGLSKIMDDDSYNSVDGMELTSQGAGTYWYLPPECFVVGKEPPKISNKVDVWSVGVIFYQCLYGRKPFGHNQSQQDILQENTILKATEVQFPPKPVVTPEAKAFIRRCLAYRKEDRIDVQQLACDPYLLPHIRKSVSTSSPAGAAIASTSGSSNNSSSN
SIO_010081: TLK2
subclass of: SO_0000673
so part of: TLK2
location: complement(join(74085..74258,74735..74842,75752..75863,76935..77073,78504..78673,79149..79238,80284..80375,82040..82121,82501..82598,84439..84505,88306..88458,89839..89975,91217..91327,92897..92989,95814..95909,99268..99363,100445..100488,101509..101578,103977..104048,110656..110721,112458..112538))
location: region:74085-112538:-1
so has part: feature:112458-112538:-1:exon
so has part: feature:110656-110721:-1:exon
so has part: feature:103977-104048:-1:exon
so has part: feature:101509-101578:-1:exon
so has part: feature:100445-100488:-1:exon
so has part: feature:99268-99363:-1:exon
so has part: feature:95814-95909:-1:exon
so has part: feature:92897-92989:-1:exon
so has part: feature:91217-91327:-1:exon
so has part: feature:89839-89975:-1:exon
so has part: feature:88306-88458:-1:exon
so has part: feature:84439-84505:-1:exon
so has part: feature:82501-82598:-1:exon
so has part: feature:82040-82121:-1:exon
so has part: feature:80284-80375:-1:exon
so has part: feature:79149-79238:-1:exon
so has part: feature:78504-78673:-1:exon
so has part: feature:76935-77073:-1:exon
so has part: feature:75752-75863:-1:exon
so has part: feature:74735-74842:-1:exon
so has part: feature:74085-74258:-1:exon

XP_030822197.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:112458-112538:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:110656-110721:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:103977-104048:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:101509-101578:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:100445-100488:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:99268-99363:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:95814-95909:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:92897-92989:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:91217-91327:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:89839-89975:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:88306-88458:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:84439-84505:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:82501-82598:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:82040-82121:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:80284-80375:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:79149-79238:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:78504-78673:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:76935-77073:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:75752-75863:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:74735-74842:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:74085-74258:-1:exon

TLK2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 87175
gene: TLK2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: serine/threonine-protein kinase tousled-like 2 isoform X1
translation: MMEELHSLDPRRQELLEARFTGVGVAKVGASNSLPTPPSLRPSCSALALGPLNSESSNQSLCSVGSLSDKELETPEKKQNDQRNRKRKAEAYETSQGKGTPRGHKISDYFEFAGGSGPGTSPGRSVPPVARSSPQHSLSNPLPRRMEQPLYGVDGSAAKEPQEEHSALPTLMSVMLAKQRLENEQLAQRGGGLCFTFVSAQQGSPSSTGSGNTEHSCTSQKQISIQHKQSQSDLTMEKISALENSKNSDLEKKEGRIDDLLRANCDLRRQIDEQQKMLEKYKERLNRCVTMSKKLLIEKSKQEKMACRDKSMQDRLRLGHFTTVRHGASFTEQWTDGYAFQNLIKQQERINSQREEIERQRKMLAKRKPPAMGQTPPASTEQKQRKSKTNGAENETLTLAEYHEQEEIFKLRLGHLKKEEAEIQAELERLERVRNLHIRELKRIHNEDNSQFKDHPTLNDRYLLLHLLGRGGFSEVYKAFDLTEQRYVAVKIHQLNKNWRDEKKENYHKHACREYRIHKELDHPRIVKLYDYFSLDTDSFCTVLEYCEGNDLDFYLKQHKLMSEKEARSIIMQIVNALKYLNEIKPPIIHYDLKPGNILLVNGTACGEIKITDFGLSKIMDDDSYNSVDGMELTSQGAGTYWYLPPECFVVGKEPPKISNKVDVWSVGVIFYQCLYGRKPFGHNQSQQDILQENTILKATEVQFPPKPVVTPEAKAFIRRCLAYRKEDRIDVQQLACDPYLLPHIRKSVSTSSPAGAAIASTSGSSNNSSSN
SIO_010081: TLK2
subclass of: SO_0000673
so part of: TLK2
location: complement(join(74085..74258,74735..74842,75752..75863,76935..77073,78504..78673,79149..79238,80284..80375,82040..82121,82501..82598,84439..84505,88306..88458,89839..89975,91217..91327,92897..92989,95814..95909,96466..96633,99268..99363,100445..100488,101509..101578,103977..104048,110656..110721,112458..112538))
location: region:74085-112538:-1
so has part: feature:112458-112538:-1:exon
so has part: feature:110656-110721:-1:exon
so has part: feature:103977-104048:-1:exon
so has part: feature:101509-101578:-1:exon
so has part: feature:100445-100488:-1:exon
so has part: feature:99268-99363:-1:exon
so has part: feature:96466-96633:-1:exon
so has part: feature:95814-95909:-1:exon
so has part: feature:92897-92989:-1:exon
so has part: feature:91217-91327:-1:exon
so has part: feature:89839-89975:-1:exon
so has part: feature:88306-88458:-1:exon
so has part: feature:84439-84505:-1:exon
so has part: feature:82501-82598:-1:exon
so has part: feature:82040-82121:-1:exon
so has part: feature:80284-80375:-1:exon
so has part: feature:79149-79238:-1:exon
so has part: feature:78504-78673:-1:exon
so has part: feature:76935-77073:-1:exon
so has part: feature:75752-75863:-1:exon
so has part: feature:74735-74842:-1:exon
so has part: feature:74085-74258:-1:exon

XP_030822194.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:112458-112538:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:110656-110721:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:103977-104048:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:101509-101578:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:100445-100488:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:99268-99363:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:96466-96633:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:95814-95909:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:92897-92989:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:91217-91327:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:89839-89975:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:88306-88458:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:84439-84505:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:82501-82598:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:82040-82121:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:80284-80375:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:79149-79238:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:78504-78673:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:76935-77073:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:75752-75863:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:74735-74842:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:74085-74258:-1:exon

TLK2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 87175
gene: TLK2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: serine/threonine-protein kinase tousled-like 2 isoform X1
translation: MMEELHSLDPRRQELLEARFTGVGVAKVGASNSLPTPPSLRPSCSALALGPLNSESSNQSLCSVGSLSDKELETPEKKQNDQRNRKRKAEAYETSQGKGTPRGHKISDYFEFAGGSGPGTSPGRSVPPVARSSPQHSLSNPLPRRMEQPLYGVDGSAAKEPQEEHSALPTLMSVMLAKQRLENEQLAQRGGGLCFTFVSAQQGSPSSTGSGNTEHSCTSQKQISIQHKQSQSDLTMEKISALENSKNSDLEKKEGRIDDLLRANCDLRRQIDEQQKMLEKYKERLNRCVTMSKKLLIEKSKQEKMACRDKSMQDRLRLGHFTTVRHGASFTEQWTDGYAFQNLIKQQERINSQREEIERQRKMLAKRKPPAMGQTPPASTEQKQRKSKTNGAENETLTLAEYHEQEEIFKLRLGHLKKEEAEIQAELERLERVRNLHIRELKRIHNEDNSQFKDHPTLNDRYLLLHLLGRGGFSEVYKAFDLTEQRYVAVKIHQLNKNWRDEKKENYHKHACREYRIHKELDHPRIVKLYDYFSLDTDSFCTVLEYCEGNDLDFYLKQHKLMSEKEARSIIMQIVNALKYLNEIKPPIIHYDLKPGNILLVNGTACGEIKITDFGLSKIMDDDSYNSVDGMELTSQGAGTYWYLPPECFVVGKEPPKISNKVDVWSVGVIFYQCLYGRKPFGHNQSQQDILQENTILKATEVQFPPKPVVTPEAKAFIRRCLAYRKEDRIDVQQLACDPYLLPHIRKSVSTSSPAGAAIASTSGSSNNSSSN
SIO_010081: TLK2
subclass of: SO_0000673
so part of: TLK2
location: complement(join(74085..74258,74735..74842,75752..75863,76935..77073,78504..78673,79149..79238,80284..80375,82040..82121,82501..82598,84439..84505,88306..88458,89839..89975,91217..91327,92897..92989,95814..95909,96466..96633,99268..99363,100445..100488,101509..101578,103977..104048,110656..110721,112458..112538))
location: region:74085-112538:-1
so has part: feature:112458-112538:-1:exon
so has part: feature:110656-110721:-1:exon
so has part: feature:103977-104048:-1:exon
so has part: feature:101509-101578:-1:exon
so has part: feature:100445-100488:-1:exon
so has part: feature:99268-99363:-1:exon
so has part: feature:96466-96633:-1:exon
so has part: feature:95814-95909:-1:exon
so has part: feature:92897-92989:-1:exon
so has part: feature:91217-91327:-1:exon
so has part: feature:89839-89975:-1:exon
so has part: feature:88306-88458:-1:exon
so has part: feature:84439-84505:-1:exon
so has part: feature:82501-82598:-1:exon
so has part: feature:82040-82121:-1:exon
so has part: feature:80284-80375:-1:exon
so has part: feature:79149-79238:-1:exon
so has part: feature:78504-78673:-1:exon
so has part: feature:76935-77073:-1:exon
so has part: feature:75752-75863:-1:exon
so has part: feature:74735-74842:-1:exon
so has part: feature:74085-74258:-1:exon

XP_030822195.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:112458-112538:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:110656-110721:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:103977-104048:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:101509-101578:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:100445-100488:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:99268-99363:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:96466-96633:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:95814-95909:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:92897-92989:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:91217-91327:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:89839-89975:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:88306-88458:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:84439-84505:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:82501-82598:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:82040-82121:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:80284-80375:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:79149-79238:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:78504-78673:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:76935-77073:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:75752-75863:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:74735-74842:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:74085-74258:-1:exon

LOC115914124
type: Gene
subclass of: SO_0000704
RO_0002162: 87175
gene: LOC115914124
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 117977..119078
location: region:117977-119078:1
so has part: feature:117977-119078:1:exon
subclass of: SO_0000011

115914124
type: Gene
SIO_000068: ncbigene

position:117977:1
position: 117977
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:119078:1
position: 119078
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:117977-119078:1:exon

LOC115914124
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 87175
nc RNA class: lncRNA
gene: LOC115914124
product: uncharacterized LOC115914124
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XR_004061416.1
SIO_010081: LOC115914124
subclass of: SO_0000673
so part of: LOC115914124
location: join(117977..118106,118214..118326,118970..119078)
location: region:117977-119078:1
so has part: feature:117977-118106:1:exon
so has part: feature:118214-118326:1:exon
so has part: feature:118970-119078:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:117977-118106:1:exon

position:118106:1
position: 118106
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:118214-118326:1:exon

position:118214:1
position: 118214
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:118326:1
position: 118326
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:118970-119078:1:exon

position:118970:1
position: 118970
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC115914086
type: Gene
subclass of: SO_0000704
RO_0002162: 87175
gene: LOC115914086
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(135895..149603)
location: region:135895-149603:-1
so has part: feature:135895-149603:-1:exon
subclass of: SO_0000010

115914086
type: Gene
SIO_000068: ncbigene

position:135895:-1
position: 135895
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:149603:-1
position: 149603
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:135895-149603:-1:exon

LOC115914086
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 87175
gene: LOC115914086
product: methyltransferase-like protein 2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 mRNAs, 7 ESTs, 11 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XM_030966435.1
SIO_010081: LOC115914086
subclass of: SO_0000673
so part of: LOC115914086
location: complement(join(135895..137360,138669..138734,138929..139035,139786..139925,141071..141131,141739..141788,143697..144058,147846..147937,149475..149603))
location: region:135895-149603:-1
so has part: feature:149475-149603:-1:exon
so has part: feature:147846-147937:-1:exon
so has part: feature:143697-144058:-1:exon
so has part: feature:141739-141788:-1:exon
so has part: feature:141071-141131:-1:exon
so has part: feature:139786-139925:-1:exon
so has part: feature:138929-139035:-1:exon
so has part: feature:138669-138734:-1:exon
so has part: feature:135895-137360:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:149475-149603:-1:exon

position:149475:-1
position: 149475
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:147846-147937:-1:exon

position:147846:-1
position: 147846
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:147937:-1
position: 147937
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:143697-144058:-1:exon

position:143697:-1
position: 143697
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:144058:-1
position: 144058
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:141739-141788:-1:exon

position:141739:-1
position: 141739
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:141788:-1
position: 141788
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:141071-141131:-1:exon

position:141071:-1
position: 141071
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:141131:-1
position: 141131
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:139786-139925:-1:exon

position:139786:-1
position: 139786
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:139925:-1
position: 139925
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:138929-139035:-1:exon

position:138929:-1
position: 138929
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:139035:-1
position: 139035
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:138669-138734:-1:exon

position:138669:-1
position: 138669
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:138734:-1
position: 138734
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:135895-137360:-1:exon

position:137360:-1
position: 137360
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC115914086
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 87175
gene: LOC115914086
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: methyltransferase-like protein 2
translation: MAASSEAGERRPFGRRLLTDPSRLFQHNAWDNVEWSEEQEASARSKVQENSSQLLPQDKQEEYEVNAKKYWDDFYKIHENGFFKDRHWLFTEFPELAPHRNSSQNGDSVHGFSDTEESKKKGLGSCELCHCSLETRTERQLNLIKSPPGGHTEELAAQKDSELSQHDGHYPGSAASYRILEVGCGAGNTVFPILQTNNDPGLFVYCCDFSTAAVDLVQNNAEYDSSRCFAFVHDLCNDQSPFPMPEESLDIVILIFVLSAILPEKMQCIVTRLSRLLKPGGMILLRDYGRYDLAQLRFKKGQCLSDNFYVRGDGTRVYFFTQDELDHLFTTAGLEKVQNLIDRRLQVNRGKQMTMYRVWIQCKYCKPTTLQP
SIO_010081: LOC115914086
subclass of: SO_0000673
so part of: LOC115914086
location: complement(join(137209..137360,138669..138734,138929..139035,139786..139925,141071..141131,141739..141788,143697..144058,147846..147937,149475..149563))
location: region:137209-149563:-1
so has part: feature:149475-149563:-1:exon
so has part: feature:147846-147937:-1:exon
so has part: feature:143697-144058:-1:exon
so has part: feature:141739-141788:-1:exon
so has part: feature:141071-141131:-1:exon
so has part: feature:139786-139925:-1:exon
so has part: feature:138929-139035:-1:exon
so has part: feature:138669-138734:-1:exon
so has part: feature:137209-137360:-1:exon

XP_030822295.1
type: Protein
SIO_000068: ncbiprotein

position:137209:-1
position: 137209
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:149563:-1
position: 149563
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:149475-149563:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:147846-147937:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:143697-144058:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:141739-141788:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:141071-141131:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:139786-139925:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:138929-139035:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:138669-138734:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:137209-137360:-1:exon

ITGB3
type: Gene
subclass of: SO_0000704
RO_0002162: 87175
gene: ITGB3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(155265..177563)
location: region:155265-177563:-1
so has part: feature:155265-177563:-1:exon
subclass of: SO_0000010

115914013
type: Gene
SIO_000068: ncbigene

position:155265:-1
position: 155265
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:177563:-1
position: 177563
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:155265-177563:-1:exon

ITGB3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 87175
gene: ITGB3
product: integrin subunit beta 3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 5 ESTs, 34 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_030966355.1
SIO_010081: ITGB3
subclass of: SO_0000673
so part of: ITGB3
location: complement(join(155265..156537,157415..157581,158604..158723,158845..158945,159223..159445,161469..161898,162543..162677,163064..163153,163319..163414,163570..163731,164318..164480,165179..165431,167842..168034,172168..172253,177207..177563))
location: region:155265-177563:-1
so has part: feature:177207-177563:-1:exon
so has part: feature:172168-172253:-1:exon
so has part: feature:167842-168034:-1:exon
so has part: feature:165179-165431:-1:exon
so has part: feature:164318-164480:-1:exon
so has part: feature:163570-163731:-1:exon
so has part: feature:163319-163414:-1:exon
so has part: feature:163064-163153:-1:exon
so has part: feature:162543-162677:-1:exon
so has part: feature:161469-161898:-1:exon
so has part: feature:159223-159445:-1:exon
so has part: feature:158845-158945:-1:exon
so has part: feature:158604-158723:-1:exon
so has part: feature:157415-157581:-1:exon
so has part: feature:155265-156537:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:177207-177563:-1:exon

position:177207:-1
position: 177207
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:172168-172253:-1:exon

position:172168:-1
position: 172168
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:172253:-1
position: 172253
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:167842-168034:-1:exon

position:167842:-1
position: 167842
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:168034:-1
position: 168034
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:165179-165431:-1:exon

position:165179:-1
position: 165179
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:165431:-1
position: 165431
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:164318-164480:-1:exon

position:164318:-1
position: 164318
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:164480:-1
position: 164480
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:163570-163731:-1:exon

position:163570:-1
position: 163570
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:163731:-1
position: 163731
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:163319-163414:-1:exon

position:163319:-1
position: 163319
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:163414:-1
position: 163414
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:163064-163153:-1:exon

position:163064:-1
position: 163064
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:163153:-1
position: 163153
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:162543-162677:-1:exon

position:162543:-1
position: 162543
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:162677:-1
position: 162677
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:161469-161898:-1:exon

position:161469:-1
position: 161469
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:161898:-1
position: 161898
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:159223-159445:-1:exon

position:159223:-1
position: 159223
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:159445:-1
position: 159445
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:158845-158945:-1:exon

position:158845:-1
position: 158845
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:158945:-1
position: 158945
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:158604-158723:-1:exon

position:158604:-1
position: 158604
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:158723:-1
position: 158723
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:157415-157581:-1:exon

position:157415:-1
position: 157415
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:157581:-1
position: 157581
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:155265-156537:-1:exon

position:156537:-1
position: 156537
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

ITGB3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 87175
gene: ITGB3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: integrin beta-3
translation: MDQLSVTLGILLLCATGSWGGNICTTRGVNSCKQCLAVSPLCAWCSAEVWAQSTPRCDLHANLLHNGCRQDQIEFPSSSITILEDRPLSNKGSGGSPTTQMSPQRIQLNLRPDDSQVFHVQVRQVEDYPVDIYYLMDLSNSMKDDLRNIQNLGTKLASEMRKLTSNLRIGFGAFVDKPISPYMYISPPEAIKNPCYEIGETCLPMFGYKHVLSLTDEVTRFNEEVQKQSVSRNRDAPEGGFDAIIQATVCDEKIGWRNDASHLLVFTTDAKTHIALDGRLAGIVQPNDAQCHIDKDNFYSATTTLDYPSLGLMTEKLSQKNINLIFAVTDTVVGLYQNYSELIPGTTVGTLSRDSSNVLQLIVDSYGKIRSKVELEVRDLPEELSLTFNATCLNDEVIPGLKSCMGLKIGDTVSFSIEAKVRGCPQEQQKSFTIKPVGFKDSLTVVVNFDCECSCESHAESNSPSCSHGNGTLECGVCRCNAGRLGSHCECSEEEYNPSQQDNCSPRPGQPLCSQRGECICGQCVCHSSDFGKVTGKYCECDDFSCVRFKGQMCSGHGQCSCGDCLCNSDWTGDYCNCTTRTDTCMSSNGLVCSGHGSCVCGRCECTQPGSYGDTCEKCPTCPDACTIKKDCVECKKFERGKLMEQQSCSRMCRDEIETVQELSDRGKDAVNCTYKDENDCVMRFQYYEDSSGKSILHVIEEPDCPKGPDVLVVLLSVTGAILLIGLAALLIWKLLITIHDRREFAHFEEEKARAKWDTTHNPLYKEATSTFTNITYRGNM
SIO_010081: ITGB3
subclass of: SO_0000673
so part of: ITGB3
location: complement(join(156469..156537,157415..157581,158604..158723,158845..158945,159223..159445,161469..161898,162543..162677,163064..163153,163319..163414,163570..163731,164318..164480,165179..165431,167842..168034,172168..172253,177207..177264))
location: region:156469-177264:-1
so has part: feature:177207-177264:-1:exon
so has part: feature:172168-172253:-1:exon
so has part: feature:167842-168034:-1:exon
so has part: feature:165179-165431:-1:exon
so has part: feature:164318-164480:-1:exon
so has part: feature:163570-163731:-1:exon
so has part: feature:163319-163414:-1:exon
so has part: feature:163064-163153:-1:exon
so has part: feature:162543-162677:-1:exon
so has part: feature:161469-161898:-1:exon
so has part: feature:159223-159445:-1:exon
so has part: feature:158845-158945:-1:exon
so has part: feature:158604-158723:-1:exon
so has part: feature:157415-157581:-1:exon
so has part: feature:156469-156537:-1:exon

XP_030822215.1
type: Protein
SIO_000068: ncbiprotein

position:156469:-1
position: 156469
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:177264:-1
position: 177264
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:177207-177264:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:172168-172253:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:167842-168034:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:165179-165431:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:164318-164480:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:163570-163731:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:163319-163414:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:163064-163153:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:162543-162677:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:161469-161898:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:159223-159445:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:158845-158945:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:158604-158723:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:157415-157581:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:156469-156537:-1:exon

RPRML
type: Gene
subclass of: SO_0000704
RO_0002162: 87175
gene: RPRML
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 181384..181821
location: region:181384-181821:1
so has part: feature:181384-181821:1:exon
subclass of: SO_0000010

115914098
type: Gene
SIO_000068: ncbigene

position:181384:1
position: 181384
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:181821:1
position: 181821
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:181384-181821:1:exon

RPRML
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 87175
gene: RPRML
product: reprimo like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 Proteins, and 91% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_030966446.1
SIO_010081: RPRML
subclass of: SO_0000673
so part of: RPRML
location: 181384..181821
location: region:181384-181821:1
so has part: feature:181384-181821:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:181384-181821:1:exon

RPRML
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 87175
gene: RPRML
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: reprimo-like protein
translation: MNGSFFNQTLLEQAADPNRTQGLGMLLACCNGTSTVLATDGSSLVLAPDERSLFITRVVQIAVLCVLSLTVMFGIFFLGCNLLIKSESMINFLVKDRRPSKDVGAAIMGLY
SIO_010081: RPRML
subclass of: SO_0000673
so part of: RPRML
location: 181486..181821
location: region:181486-181821:1
so has part: feature:181486-181821:1:exon

XP_030822306.1
type: Protein
SIO_000068: ncbiprotein

position:181486:1
position: 181486
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:181486-181821:1:exon

CRHR1
type: Gene
subclass of: SO_0000704
RO_0002162: 87175
gene: CRHR1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(255760..283880)
location: region:255760-283880:-1
so has part: feature:255760-283880:-1:exon
subclass of: SO_0000010

115914045
type: Gene
SIO_000068: ncbigene

position:255760:-1
position: 255760
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:283880:-1
position: 283880
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:255760-283880:-1:exon

CRHR1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 87175
gene: CRHR1
product: corticotropin releasing hormone receptor 1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 1 EST, 20 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_030966389.1
SIO_010081: CRHR1
subclass of: SO_0000673
so part of: CRHR1
location: complement(join(255760..256236,256893..256934,257119..257254,258639..258724,260429..260501,261850..261910,262160..262313,262792..262912,263259..263365,264342..264427,265569..265688,275076..275160,283310..283420,283809..283880))
location: region:255760-283880:-1
so has part: feature:283809-283880:-1:exon
so has part: feature:283310-283420:-1:exon
so has part: feature:275076-275160:-1:exon
so has part: feature:265569-265688:-1:exon
so has part: feature:264342-264427:-1:exon
so has part: feature:263259-263365:-1:exon
so has part: feature:262792-262912:-1:exon
so has part: feature:262160-262313:-1:exon
so has part: feature:261850-261910:-1:exon
so has part: feature:260429-260501:-1:exon
so has part: feature:258639-258724:-1:exon
so has part: feature:257119-257254:-1:exon
so has part: feature:256893-256934:-1:exon
so has part: feature:255760-256236:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:283809-283880:-1:exon

position:283809:-1
position: 283809
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:283310-283420:-1:exon

position:283310:-1
position: 283310
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:283420:-1
position: 283420
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:275076-275160:-1:exon

position:275076:-1
position: 275076
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:275160:-1
position: 275160
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:265569-265688:-1:exon

position:265569:-1
position: 265569
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:265688:-1
position: 265688
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:264342-264427:-1:exon

position:264342:-1
position: 264342
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:264427:-1
position: 264427
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:263259-263365:-1:exon

position:263259:-1
position: 263259
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:263365:-1
position: 263365
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:262792-262912:-1:exon

position:262792:-1
position: 262792
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:262912:-1
position: 262912
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:262160-262313:-1:exon

position:262160:-1
position: 262160
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:262313:-1
position: 262313
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:261850-261910:-1:exon

position:261850:-1
position: 261850
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:261910:-1
position: 261910
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:260429-260501:-1:exon

position:260429:-1
position: 260429
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:260501:-1
position: 260501
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:258639-258724:-1:exon

position:258639:-1
position: 258639
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:258724:-1
position: 258724
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:257119-257254:-1:exon

position:257119:-1
position: 257119
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:257254:-1
position: 257254
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:256893-256934:-1:exon

position:256893:-1
position: 256893
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:256934:-1
position: 256934
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:255760-256236:-1:exon

position:256236:-1
position: 256236
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

CRHR1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 87175
gene: CRHR1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: corticotropin-releasing factor receptor 1
translation: MGKQPSRSGDAASHAPGSWAQGQLRMVSSLRPALLLLLQAFLLWDSPVAASIQEQYCESLPPVTNLTGPQCNASVDLIGTCWPRSAVGQLVARPCPEYFYGVRYNTTNNGYRECLANGSWAARVNYSQCQEILSEEKKSKLHYHIAVIINYLGHCVSLGALLVAFVLFMRLRSIRCLRNIIHWNLITAFILRNATWFVVQLTMNPEVHESNVVWCRLVTAAYNYFHVTNFFWMFVEGCYLHTAIVLTYSTDKLRKWMFICIGWCIPFPIIVAWAIGKLYYDNEKCWFGKRAGVYTDYIYQGPMILVLLINFIFLFNIVRILMTKLRASTTSETIQYRKAVKATLVLLPLLGITYMLFFVNPGEDEISRIVFIYFNSFLESFQGFFVSVFYCFLNSEVRSAVRKRWHRWQDKHSIRARVARAMSIPTSPTRVSFHSIKQSTAV
SIO_010081: CRHR1
subclass of: SO_0000673
so part of: CRHR1
location: complement(join(256096..256236,256893..256934,257119..257254,258639..258724,260429..260501,261850..261910,262160..262313,262792..262912,263259..263365,264342..264427,265569..265688,275076..275160,283310..283420,283809..283814))
location: region:256096-283814:-1
so has part: feature:283809-283814:-1:exon
so has part: feature:283310-283420:-1:exon
so has part: feature:275076-275160:-1:exon
so has part: feature:265569-265688:-1:exon
so has part: feature:264342-264427:-1:exon
so has part: feature:263259-263365:-1:exon
so has part: feature:262792-262912:-1:exon
so has part: feature:262160-262313:-1:exon
so has part: feature:261850-261910:-1:exon
so has part: feature:260429-260501:-1:exon
so has part: feature:258639-258724:-1:exon
so has part: feature:257119-257254:-1:exon
so has part: feature:256893-256934:-1:exon
so has part: feature:256096-256236:-1:exon

XP_030822249.1
type: Protein
SIO_000068: ncbiprotein

position:256096:-1
position: 256096
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:283814:-1
position: 283814
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:283809-283814:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:283310-283420:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:275076-275160:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:265569-265688:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:264342-264427:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:263259-263365:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:262792-262912:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:262160-262313:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:261850-261910:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:260429-260501:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:258639-258724:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:257119-257254:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:256893-256934:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:256096-256236:-1:exon

LOC115914109
type: Gene
subclass of: SO_0000704
RO_0002162: 87175
gene: LOC115914109
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 339289..374743
location: region:339289-374743:1
so has part: feature:339289-374743:1:exon
subclass of: SO_0000010

115914109
type: Gene
SIO_000068: ncbigene

position:339289:1
position: 339289
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:374743:1
position: 374743
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:339289-374743:1:exon

LOC115914109
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 87175
gene: LOC115914109
product: acid-sensing ion channel 2-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XM_030966463.1
SIO_010081: LOC115914109
subclass of: SO_0000673
so part of: LOC115914109
location: join(339289..340052,372434..374743)
location: region:339289-374743:1
so has part: feature:339289-340052:1:exon
so has part: feature:372434-374743:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:339289-340052:1:exon

position:340052:1
position: 340052
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:372434-374743:1:exon

position:372434:1
position: 372434
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC115914109
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 87175
gene: LOC115914109
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: acid-sensing ion channel 2-like
translation: MDLKDSTSEGSMGSLQPSSIQIFANTTTLHGIRHVFVYGPVTIRRLLWTLAFVGSLGLLLVESSDRVAFYFSYQHVTKVDEVVANSLVFPAVTICNLNEFRFSRLTTNDLYHAGELLALLDVNLQIPNPHLADPAVLATLQEKANFKQYKPKVFSMQEFLARVGHDLKDMMLYCKFRGQECNHKDFKTLPLDGSNMEPQTAQVCGVAMQGGGEALNPILGTTPSSDQPSREGFTVGVSSTGIAQKVPSAQALL
SIO_010081: LOC115914109
subclass of: SO_0000673
so part of: LOC115914109
location: join(339489..340052,372434..372631)
location: region:339489-372631:1
so has part: feature:339489-340052:1:exon
so has part: feature:372434-372631:1:exon

XP_030822323.1
type: Protein
SIO_000068: ncbiprotein

position:339489:1
position: 339489
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:372631:1
position: 372631
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:339489-340052:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:372434-372631:1:exon

LOC115914108
type: Gene
subclass of: SO_0000704
RO_0002162: 87175
gene: LOC115914108
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 726964..812841
location: region:726964-812841:1
so has part: feature:726964-812841:1:exon
subclass of: SO_0000010

115914108
type: Gene
SIO_000068: ncbigene

position:726964:1
position: 726964
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:812841:1
position: 812841
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:726964-812841:1:exon

LOC115914108
type: Miscellaneous RNA
subclass of: SO_0000673
RO_0002162: 87175
gene: LOC115914108
product: acid-sensing ion channel 2-like, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 ESTs, 8 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XR_004061415.1
SIO_010081: LOC115914108
so part of: LOC115914108
location: join(726964..727557,769705..769855,793276..793403,801457..801607,803516..803572,804185..804338,805191..805282,807358..807437,810481..810549,811896..812065,812621..812841)
location: region:726964-812841:1
so has part: feature:726964-727557:1:exon
so has part: feature:769705-769855:1:exon
so has part: feature:793276-793403:1:exon
so has part: feature:801457-801607:1:exon
so has part: feature:803516-803572:1:exon
so has part: feature:804185-804338:1:exon
so has part: feature:805191-805282:1:exon
so has part: feature:807358-807437:1:exon
so has part: feature:810481-810549:1:exon
so has part: feature:811896-812065:1:exon
so has part: feature:812621-812841:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:726964-727557:1:exon

position:727557:1
position: 727557
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:769705-769855:1:exon

position:769705:1
position: 769705
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:769855:1
position: 769855
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:793276-793403:1:exon

position:793276:1
position: 793276
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:793403:1
position: 793403
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:801457-801607:1:exon

position:801457:1
position: 801457
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:801607:1
position: 801607
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:803516-803572:1:exon

position:803516:1
position: 803516
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:803572:1
position: 803572
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:804185-804338:1:exon

position:804185:1
position: 804185
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:804338:1
position: 804338
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:805191-805282:1:exon

position:805191:1
position: 805191
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:805282:1
position: 805282
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:807358-807437:1:exon

position:807358:1
position: 807358
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:807437:1
position: 807437
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:810481-810549:1:exon

position:810481:1
position: 810481
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:810549:1
position: 810549
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:811896-812065:1:exon

position:811896:1
position: 811896
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:812065:1
position: 812065
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:812621-812841:1:exon

position:812621:1
position: 812621
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC115914108
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 87175
gene: LOC115914108
product: acid-sensing ion channel 2-like, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 ESTs, 8 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XM_030966461.1
SIO_010081: LOC115914108
subclass of: SO_0000673
so part of: LOC115914108
location: join(726964..727557,769705..769855,793276..793403,801457..801607,803516..803572,804185..804338,805191..805282,807358..807437,810481..810549,811896..812270)
location: region:726964-812270:1
so has part: feature:726964-727557:1:exon
so has part: feature:769705-769855:1:exon
so has part: feature:793276-793403:1:exon
so has part: feature:801457-801607:1:exon
so has part: feature:803516-803572:1:exon
so has part: feature:804185-804338:1:exon
so has part: feature:805191-805282:1:exon
so has part: feature:807358-807437:1:exon
so has part: feature:810481-810549:1:exon
so has part: feature:811896-812270:1:exon

position:812270:1
position: 812270
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:726964-727557:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:769705-769855:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:793276-793403:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:801457-801607:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:803516-803572:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:804185-804338:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:805191-805282:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:807358-807437:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:810481-810549:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:811896-812270:1:exon

LOC115914108
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 87175
gene: LOC115914108
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: acid-sensing ion channel 2-like
translation: MARGRRAPALRTRLHGLRLMCSARAAPARRALWVLAFCTALGLLLAWSSDRLLHWLAFPSHTRVRTEWSRQLPFPAVTLCNNNPLRFPRLSKGDLYYAGHWLGLLLPNRTARPLLTELLRADEARLRWFAKLADFRLFLPPRHYEGISADFMDRLGHQLEDMLLSCKYRGELCGPHNFSAVFTKYGKCYMFNSGEEGRPLLTTVKGGTGNGLEIMLDIQQDEYLPIWGETEETTFEAGVKVQIHSQSEPPFVQELGFGVAPGFQTFVATQEQRLAYLPPPWGECRSPELGLAFFPVYSVTACRIDCETRYIVENCNCRMVHMPGDAPFCTPEQYKECAEPALSLLAEKDSNYCICRTPCNLTRYNKELSMVKIPSKTSAKYLEKKFNKSEKYISENILVLDIFFEALNYETIEQKKAYEVAALLGDIGGQMGLFIGASILTILELFDYLYELIKEKLLDLLGKEEEDGSHEENVSTCDPVPNHSESLSHTVTVPLQAPLGTLEEIAC
SIO_010081: LOC115914108
subclass of: SO_0000673
so part of: LOC115914108
location: join(727018..727557,769705..769855,793276..793403,801457..801607,803516..803572,804185..804338,805191..805282,807358..807437,810481..810549,811896..811997)
location: region:727018-811997:1
so has part: feature:727018-727557:1:exon
so has part: feature:769705-769855:1:exon
so has part: feature:793276-793403:1:exon
so has part: feature:801457-801607:1:exon
so has part: feature:803516-803572:1:exon
so has part: feature:804185-804338:1:exon
so has part: feature:805191-805282:1:exon
so has part: feature:807358-807437:1:exon
so has part: feature:810481-810549:1:exon
so has part: feature:811896-811997:1:exon

XP_030822321.1
type: Protein
SIO_000068: ncbiprotein

position:727018:1
position: 727018
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:811997:1
position: 811997
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:727018-727557:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:769705-769855:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:793276-793403:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:801457-801607:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:803516-803572:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:804185-804338:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:805191-805282:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:807358-807437:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:810481-810549:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:811896-811997:1:exon

SMARCD2
type: Gene
subclass of: SO_0000704
RO_0002162: 87175
gene: SMARCD2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 843642..859409
location: region:843642-859409:1
so has part: feature:843642-859409:1:exon
subclass of: SO_0000010

115914014
type: Gene
SIO_000068: ncbigene

position:843642:1
position: 843642
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:859409:1
position: 859409
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:843642-859409:1:exon

SMARCD2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 87175
gene: SMARCD2
product: SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 ESTs, 22 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
transcript id: XM_030966356.1
SIO_010081: SMARCD2
subclass of: SO_0000673
so part of: SMARCD2
location: join(843642..843718,850381..850568,853060..853102,853528..853650,853962..854081,854648..854743,855544..855645,856325..856486,856672..856769,857179..857314,857392..857514,858191..858292,858392..859409)
location: region:843642-859409:1
so has part: feature:843642-843718:1:exon
so has part: feature:850381-850568:1:exon
so has part: feature:853060-853102:1:exon
so has part: feature:853528-853650:1:exon
so has part: feature:853962-854081:1:exon
so has part: feature:854648-854743:1:exon
so has part: feature:855544-855645:1:exon
so has part: feature:856325-856486:1:exon
so has part: feature:856672-856769:1:exon
so has part: feature:857179-857314:1:exon
so has part: feature:857392-857514:1:exon
so has part: feature:858191-858292:1:exon
so has part: feature:858392-859409:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:843642-843718:1:exon

position:843718:1
position: 843718
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:850381-850568:1:exon

position:850381:1
position: 850381
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:850568:1
position: 850568
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:853060-853102:1:exon

position:853060:1
position: 853060
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:853102:1
position: 853102
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:853528-853650:1:exon

position:853528:1
position: 853528
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:853650:1
position: 853650
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:853962-854081:1:exon

position:853962:1
position: 853962
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:854081:1
position: 854081
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:854648-854743:1:exon

position:854648:1
position: 854648
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:854743:1
position: 854743
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:855544-855645:1:exon

position:855544:1
position: 855544
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:855645:1
position: 855645
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:856325-856486:1:exon

position:856325:1
position: 856325
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:856486:1
position: 856486
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:856672-856769:1:exon

position:856672:1
position: 856672
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:856769:1
position: 856769
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:857179-857314:1:exon

position:857179:1
position: 857179
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:857314:1
position: 857314
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:857392-857514:1:exon

position:857392:1
position: 857392
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:857514:1
position: 857514
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:858191-858292:1:exon

position:858191:1
position: 858191
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:858292:1
position: 858292
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:858392-859409:1:exon

position:858392:1
position: 858392
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

SMARCD2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 87175
gene: SMARCD2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 2
translation: MGPAAAQYQQRPGMPPGGRMPMAGLQVGPPGAPPYGAATPLRPGLPQAMMDPFRKRLLTPQAQPPMATPRRGVKRRKMADKVLPQRIRELVPESQAYMDLLAFERKLDQTIARKRMEIQEAIKKPLTQKRKLRIYISNTFTPAKEEGEGGERVASWELRVEGKLLEDPSKQKRKFSSFFKSLVIELDKELYGPDNHLVEWHRMPTTQETDGFQVTRPGDVNVKCTLLLMLDHQPPQYKLDPRLARLLGVHTQTRASIMQALWLYIKHNKLQDSHEKEFINCNRYFRQIFNCVRMRFSEIPMKLAGLLQHPDPIIINHTISVDPNDQKKTACYDIDVEVDDPLKAQMSNFLASTTNQQEIASLDAKIHETIESINQLKTQRDFMLSFSNNPQDFIQEWIKSQRRDLKIITDVIGNPEEERRAEFYQQPWAQEAVGRHIFAKVQQRRQELEQVLGIRLT
SIO_010081: SMARCD2
subclass of: SO_0000673
so part of: SMARCD2
location: join(843692..843718,850381..850568,853060..853102,853528..853650,853962..854081,854648..854743,855544..855645,856325..856486,856672..856769,857179..857314,857392..857514,858191..858292,858392..858445)
location: region:843692-858445:1
so has part: feature:843692-843718:1:exon
so has part: feature:850381-850568:1:exon
so has part: feature:853060-853102:1:exon
so has part: feature:853528-853650:1:exon
so has part: feature:853962-854081:1:exon
so has part: feature:854648-854743:1:exon
so has part: feature:855544-855645:1:exon
so has part: feature:856325-856486:1:exon
so has part: feature:856672-856769:1:exon
so has part: feature:857179-857314:1:exon
so has part: feature:857392-857514:1:exon
so has part: feature:858191-858292:1:exon
so has part: feature:858392-858445:1:exon

XP_030822216.1
type: Protein
SIO_000068: ncbiprotein

position:843692:1
position: 843692
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:858445:1
position: 858445
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:843692-843718:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:850381-850568:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:853060-853102:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:853528-853650:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:853962-854081:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:854648-854743:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:855544-855645:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:856325-856486:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:856672-856769:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:857179-857314:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:857392-857514:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:858191-858292:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:858392-858445:1:exon

PSMC5
type: Gene
subclass of: SO_0000704
RO_0002162: 87175
gene: PSMC5
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(858813..863587)
location: region:858813-863587:-1
so has part: feature:858813-863587:-1:exon
subclass of: SO_0000010

115914015
type: Gene
SIO_000068: ncbigene

position:858813:-1
position: 858813
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:863587:-1
position: 863587
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:858813-863587:-1:exon

PSMC5
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 87175
gene: PSMC5
product: proteasome 26S subunit, ATPase 5, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 mRNAs, 40 ESTs, 26 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
transcript id: XM_030966358.1
SIO_010081: PSMC5
subclass of: SO_0000673
so part of: PSMC5
location: complement(join(858813..858916,859443..859498,859716..859802,859875..859985,860077..860175,860252..860442,861275..861401,861477..861707,862021..862077,862304..862401,862517..862586,863008..863079,863503..863587))
location: region:858813-863587:-1
so has part: feature:863503-863587:-1:exon
so has part: feature:863008-863079:-1:exon
so has part: feature:862517-862586:-1:exon
so has part: feature:862304-862401:-1:exon
so has part: feature:862021-862077:-1:exon
so has part: feature:861477-861707:-1:exon
so has part: feature:861275-861401:-1:exon
so has part: feature:860252-860442:-1:exon
so has part: feature:860077-860175:-1:exon
so has part: feature:859875-859985:-1:exon
so has part: feature:859716-859802:-1:exon
so has part: feature:859443-859498:-1:exon
so has part: feature:858813-858916:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:863503-863587:-1:exon

position:863503:-1
position: 863503
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:863008-863079:-1:exon

position:863008:-1
position: 863008
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:863079:-1
position: 863079
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:862517-862586:-1:exon

position:862517:-1
position: 862517
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:862586:-1
position: 862586
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:862304-862401:-1:exon

position:862304:-1
position: 862304
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:862401:-1
position: 862401
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:862021-862077:-1:exon

position:862021:-1
position: 862021
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:862077:-1
position: 862077
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:861477-861707:-1:exon

position:861477:-1
position: 861477
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:861707:-1
position: 861707
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:861275-861401:-1:exon

position:861275:-1
position: 861275
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:861401:-1
position: 861401
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:860252-860442:-1:exon

position:860252:-1
position: 860252
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:860442:-1
position: 860442
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:860077-860175:-1:exon

position:860077:-1
position: 860077
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:860175:-1
position: 860175
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:859875-859985:-1:exon

position:859875:-1
position: 859875
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:859985:-1
position: 859985
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:859716-859802:-1:exon

position:859716:-1
position: 859716
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:859802:-1
position: 859802
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:859443-859498:-1:exon

position:859443:-1
position: 859443
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:859498:-1
position: 859498
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:858813-858916:-1:exon

position:858916:-1
position: 858916
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

PSMC5
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 87175
gene: PSMC5
product: proteasome 26S subunit, ATPase 5, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 7 mRNAs, 40 ESTs, 27 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
transcript id: XM_030966357.1
SIO_010081: PSMC5
subclass of: SO_0000673
so part of: PSMC5
location: complement(join(858813..859498,859716..859802,859875..859985,860077..860175,860252..860442,861275..861401,861477..861707,862021..862077,862304..862401,862517..862586,863008..863079,863503..863587))
location: region:858813-863587:-1
so has part: feature:863503-863587:-1:exon
so has part: feature:863008-863079:-1:exon
so has part: feature:862517-862586:-1:exon
so has part: feature:862304-862401:-1:exon
so has part: feature:862021-862077:-1:exon
so has part: feature:861477-861707:-1:exon
so has part: feature:861275-861401:-1:exon
so has part: feature:860252-860442:-1:exon
so has part: feature:860077-860175:-1:exon
so has part: feature:859875-859985:-1:exon
so has part: feature:859716-859802:-1:exon
so has part: feature:858813-859498:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:863503-863587:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:863008-863079:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:862517-862586:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:862304-862401:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:862021-862077:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:861477-861707:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:861275-861401:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:860252-860442:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:860077-860175:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:859875-859985:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:859716-859802:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:858813-859498:-1:exon

PSMC5
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 87175
gene: PSMC5
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: 26S proteasome regulatory subunit 8
translation: MPAEKMALDGPEQMEMDDGKGGSGLRQYYLSKIEELQLIVNEKSQNLRRLQAQRNELNAKVRLLREELQLLQEQGSYVGEVVRAMDKKKVLVKVHPEGKFVVDVDKNIDINDVTPNCRVALRNDSYTLHKILPNKVDPLVSLMMVEKVPDSTYEMIGGLDKQIKEIKEVIELPVKHPELFEALGIAQPKGVLLYGPPGTGKTLLARAVAHHTDCTFIRVSGSELVQKFIGEGARMVRELFVMAREHAPSIIFMDEIDSIGSSRLEGGSGGDSEVQRTMLELLNQLDGFEATKNIKVIMATNRIDILDSALLRPGRIDRKIEFPPPNEEARLDILKIHSRKMNLTRGINLRKIAELMPGASGAEVKGVCTEAGMYALRERRVHVTQEDFEMAVAKVMQKDSEKNMSIKKLWK
SIO_010081: PSMC5
subclass of: SO_0000673
so part of: PSMC5
location: complement(join(859445..859498,859716..859802,859875..859985,860077..860175,860252..860442,861275..861401,861477..861707,862021..862077,862304..862401,862517..862586,863008..863079,863503..863541))
location: region:859445-863541:-1
so has part: feature:863503-863541:-1:exon
so has part: feature:863008-863079:-1:exon
so has part: feature:862517-862586:-1:exon
so has part: feature:862304-862401:-1:exon
so has part: feature:862021-862077:-1:exon
so has part: feature:861477-861707:-1:exon
so has part: feature:861275-861401:-1:exon
so has part: feature:860252-860442:-1:exon
so has part: feature:860077-860175:-1:exon
so has part: feature:859875-859985:-1:exon
so has part: feature:859716-859802:-1:exon
so has part: feature:859445-859498:-1:exon

XP_030822217.1
type: Protein
SIO_000068: ncbiprotein

position:859445:-1
position: 859445
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:863541:-1
position: 863541
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:863503-863541:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:863008-863079:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:862517-862586:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:862304-862401:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:862021-862077:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:861477-861707:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:861275-861401:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:860252-860442:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:860077-860175:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:859875-859985:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:859716-859802:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:859445-859498:-1:exon

PSMC5
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 87175
gene: PSMC5
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: 26S proteasome regulatory subunit 8
translation: MPAEKMALDGPEQMEMDDGKGGSGLRQYYLSKIEELQLIVNEKSQNLRRLQAQRNELNAKVRLLREELQLLQEQGSYVGEVVRAMDKKKVLVKVHPEGKFVVDVDKNIDINDVTPNCRVALRNDSYTLHKILPNKVDPLVSLMMVEKVPDSTYEMIGGLDKQIKEIKEVIELPVKHPELFEALGIAQPKGVLLYGPPGTGKTLLARAVAHHTDCTFIRVSGSELVQKFIGEGARMVRELFVMAREHAPSIIFMDEIDSIGSSRLEGGSGGDSEVQRTMLELLNQLDGFEATKNIKVIMATNRIDILDSALLRPGRIDRKIEFPPPNEEARLDILKIHSRKMNLTRGINLRKIAELMPGASGAEVKGVCTEAGMYALRERRVHVTQEDFEMAVAKVMQKDSEKNMSIKKLWK
SIO_010081: PSMC5
subclass of: SO_0000673
so part of: PSMC5
location: complement(join(859445..859498,859716..859802,859875..859985,860077..860175,860252..860442,861275..861401,861477..861707,862021..862077,862304..862401,862517..862586,863008..863079,863503..863541))
location: region:859445-863541:-1
so has part: feature:863503-863541:-1:exon
so has part: feature:863008-863079:-1:exon
so has part: feature:862517-862586:-1:exon
so has part: feature:862304-862401:-1:exon
so has part: feature:862021-862077:-1:exon
so has part: feature:861477-861707:-1:exon
so has part: feature:861275-861401:-1:exon
so has part: feature:860252-860442:-1:exon
so has part: feature:860077-860175:-1:exon
so has part: feature:859875-859985:-1:exon
so has part: feature:859716-859802:-1:exon
so has part: feature:859445-859498:-1:exon

XP_030822218.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:863503-863541:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:863008-863079:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:862517-862586:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:862304-862401:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:862021-862077:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:861477-861707:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:861275-861401:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:860252-860442:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:860077-860175:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:859875-859985:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:859716-859802:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:859445-859498:-1:exon

FTSJ3
type: Gene
subclass of: SO_0000704
RO_0002162: 87175
gene: FTSJ3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 863799..873566
location: region:863799-873566:1
so has part: feature:863799-873566:1:exon
subclass of: SO_0000010

115914118
type: Gene
SIO_000068: ncbigene

position:863799:1
position: 863799
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:873566:1
position: 873566
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:863799-873566:1:exon

FTSJ3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 87175
gene: FTSJ3
product: FtsJ RNA 2'-O-methyltransferase 3, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_030966475.1
SIO_010081: FTSJ3
subclass of: SO_0000673
so part of: FTSJ3
location: join(863799..863894,864463..864589,864669..864774,866543..866589,866728..866807,866917..867016,867279..867473,868200..868315,868813..868917,869000..869100,869207..869287,869412..869564,869772..869907,869998..870194,870294..870414,870721..870814,871093..871252,871341..871417,871581..871677,871770..871953,872424..872518,872720..873566)
location: region:863799-873566:1
so has part: feature:863799-863894:1:exon
so has part: feature:864463-864589:1:exon
so has part: feature:864669-864774:1:exon
so has part: feature:866543-866589:1:exon
so has part: feature:866728-866807:1:exon
so has part: feature:866917-867016:1:exon
so has part: feature:867279-867473:1:exon
so has part: feature:868200-868315:1:exon
so has part: feature:868813-868917:1:exon
so has part: feature:869000-869100:1:exon
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urn:…
SIO_000300: 1
SIO_000628: feature:863799-863894:1:exon

position:863894:1
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urn:…
SIO_000300: 2
SIO_000628: feature:864463-864589:1:exon

position:864463:1
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reference: sequence
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position:864589:1
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urn:…
SIO_000300: 3
SIO_000628: feature:864669-864774:1:exon

position:864669:1
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position:864774:1
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urn:…
SIO_000300: 4
SIO_000628: feature:866543-866589:1:exon

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position:866589:1
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urn:…
SIO_000300: 5
SIO_000628: feature:866728-866807:1:exon

position:866728:1
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position:866807:1
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urn:…
SIO_000300: 6
SIO_000628: feature:866917-867016:1:exon

position:866917:1
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position:867016:1
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urn:…
SIO_000300: 7
SIO_000628: feature:867279-867473:1:exon

position:867279:1
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reference: sequence
type: ForwardStrandPosition
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position:867473:1
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urn:…
SIO_000300: 8
SIO_000628: feature:868200-868315:1:exon

position:868200:1
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urn:…
SIO_000300: 9
SIO_000628: feature:868813-868917:1:exon

position:868813:1
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position:868917:1
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urn:…
SIO_000300: 10
SIO_000628: feature:869000-869100:1:exon

position:869000:1
position: 869000
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position:869100:1
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urn:…
SIO_000300: 11
SIO_000628: feature:869207-869287:1:exon

position:869207:1
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position:869287:1
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urn:…
SIO_000300: 12
SIO_000628: feature:869412-869564:1:exon

position:869412:1
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type: ForwardStrandPosition
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position:869564:1
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urn:…
SIO_000300: 13
SIO_000628: feature:869772-869907:1:exon

position:869772:1
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position:869907:1
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urn:…
SIO_000300: 14
SIO_000628: feature:869998-870194:1:exon

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position:870194:1
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urn:…
SIO_000300: 15
SIO_000628: feature:870294-870414:1:exon

position:870294:1
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position:870414:1
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urn:…
SIO_000300: 16
SIO_000628: feature:870721-870814:1:exon

position:870721:1
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position:870814:1
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urn:…
SIO_000300: 17
SIO_000628: feature:871093-871252:1:exon

position:871093:1
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reference: sequence
type: ForwardStrandPosition
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position:871252:1
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urn:…
SIO_000300: 18
SIO_000628: feature:871341-871417:1:exon

position:871341:1
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reference: sequence
type: ForwardStrandPosition
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position:871417:1
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urn:…
SIO_000300: 19
SIO_000628: feature:871581-871677:1:exon

position:871581:1
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type: ForwardStrandPosition
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position:871677:1
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urn:…
SIO_000300: 20
SIO_000628: feature:871770-871953:1:exon

position:871770:1
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type: ForwardStrandPosition
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position:871953:1
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urn:…
SIO_000300: 21
SIO_000628: feature:872424-872518:1:exon

position:872424:1
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type: ForwardStrandPosition
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position:872518:1
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reference: sequence
type: ForwardStrandPosition
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urn:…
SIO_000300: 22
SIO_000628: feature:872720-873566:1:exon

position:872720:1
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reference: sequence
type: ForwardStrandPosition
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FTSJ3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 87175
gene: FTSJ3
product: FtsJ RNA 2'-O-methyltransferase 3, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 ESTs, 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XM_030966473.1
SIO_010081: FTSJ3
subclass of: SO_0000673
so part of: FTSJ3
location: join(863820..863957,864463..864589,864669..864774,866543..866589,866728..866807,866917..867016,867279..867473,868200..868315,868813..868917,869000..869100,869207..869287,869412..869564,869772..869907,869998..870194,870294..870414,870721..870814,871093..871252,871341..871417,871581..871677,871770..871953,872424..872518,872720..873566)
location: region:863820-873566:1
so has part: feature:863820-863957:1:exon
so has part: feature:864463-864589:1:exon
so has part: feature:864669-864774:1:exon
so has part: feature:866543-866589:1:exon
so has part: feature:866728-866807:1:exon
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so has part: feature:868200-868315:1:exon
so has part: feature:868813-868917:1:exon
so has part: feature:869000-869100:1:exon
so has part: feature:869207-869287:1:exon
so has part: feature:869412-869564:1:exon
so has part: feature:869772-869907:1:exon
so has part: feature:869998-870194:1:exon
so has part: feature:870294-870414:1:exon
so has part: feature:870721-870814:1:exon
so has part: feature:871093-871252:1:exon
so has part: feature:871341-871417:1:exon
so has part: feature:871581-871677:1:exon
so has part: feature:871770-871953:1:exon
so has part: feature:872424-872518:1:exon
so has part: feature:872720-873566:1:exon

position:863820:1
position: 863820
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:863820-863957:1:exon

position:863957:1
position: 863957
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:864463-864589:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:864669-864774:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:866543-866589:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:866728-866807:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:866917-867016:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:867279-867473:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:868200-868315:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:868813-868917:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:869000-869100:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:869207-869287:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:869412-869564:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:869772-869907:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:869998-870194:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:870294-870414:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:870721-870814:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:871093-871252:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:871341-871417:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:871581-871677:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:871770-871953:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:872424-872518:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:872720-873566:1:exon

FTSJ3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 87175
gene: FTSJ3
product: FtsJ RNA 2'-O-methyltransferase 3, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_030966476.1
SIO_010081: FTSJ3
subclass of: SO_0000673
so part of: FTSJ3
location: join(863849..863921,864463..864589,864669..864774,866543..866589,866728..866807,866917..867016,867279..867473,868200..868315,868813..868917,869000..869100,869207..869287,869412..869564,869772..869907,869998..870194,870294..870414,870721..870814,871093..871252,871341..871417,871581..871677,871770..871953,872424..872518,872720..873566)
location: region:863849-873566:1
so has part: feature:863849-863921:1:exon
so has part: feature:864463-864589:1:exon
so has part: feature:864669-864774:1:exon
so has part: feature:866543-866589:1:exon
so has part: feature:866728-866807:1:exon
so has part: feature:866917-867016:1:exon
so has part: feature:867279-867473:1:exon
so has part: feature:868200-868315:1:exon
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so has part: feature:869000-869100:1:exon
so has part: feature:869207-869287:1:exon
so has part: feature:869412-869564:1:exon
so has part: feature:869772-869907:1:exon
so has part: feature:869998-870194:1:exon
so has part: feature:870294-870414:1:exon
so has part: feature:870721-870814:1:exon
so has part: feature:871093-871252:1:exon
so has part: feature:871341-871417:1:exon
so has part: feature:871581-871677:1:exon
so has part: feature:871770-871953:1:exon
so has part: feature:872424-872518:1:exon
so has part: feature:872720-873566:1:exon

position:863849:1
position: 863849
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:863849-863921:1:exon

position:863921:1
position: 863921
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:864463-864589:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:864669-864774:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:866543-866589:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:866728-866807:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:866917-867016:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:867279-867473:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:868200-868315:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:868813-868917:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:869000-869100:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:869207-869287:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:869412-869564:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:869772-869907:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:869998-870194:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:870294-870414:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:870721-870814:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:871093-871252:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:871341-871417:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:871581-871677:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:871770-871953:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:872424-872518:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:872720-873566:1:exon

FTSJ3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 87175
gene: FTSJ3
product: FtsJ RNA 2'-O-methyltransferase 3, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_030966474.1
SIO_010081: FTSJ3
subclass of: SO_0000673
so part of: FTSJ3
location: join(863912..863987,864463..864589,864669..864774,866543..866589,866728..866807,866917..867016,867279..867473,868200..868315,868813..868917,869000..869100,869207..869287,869412..869564,869772..869907,869998..870194,870294..870414,870721..870814,871093..871252,871341..871417,871581..871677,871770..871953,872424..872518,872720..873566)
location: region:863912-873566:1
so has part: feature:863912-863987:1:exon
so has part: feature:864463-864589:1:exon
so has part: feature:864669-864774:1:exon
so has part: feature:866543-866589:1:exon
so has part: feature:866728-866807:1:exon
so has part: feature:866917-867016:1:exon
so has part: feature:867279-867473:1:exon
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so has part: feature:869998-870194:1:exon
so has part: feature:870294-870414:1:exon
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so has part: feature:871093-871252:1:exon
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so has part: feature:871581-871677:1:exon
so has part: feature:871770-871953:1:exon
so has part: feature:872424-872518:1:exon
so has part: feature:872720-873566:1:exon

position:863912:1
position: 863912
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:863912-863987:1:exon

position:863987:1
position: 863987
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:864463-864589:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:864669-864774:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:866543-866589:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:866728-866807:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:866917-867016:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:867279-867473:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:868200-868315:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:868813-868917:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:869000-869100:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:869207-869287:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:869412-869564:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:869772-869907:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:869998-870194:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:870294-870414:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:870721-870814:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:871093-871252:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:871341-871417:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:871581-871677:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:871770-871953:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:872424-872518:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:872720-873566:1:exon

FTSJ3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 87175
gene: FTSJ3
product: FtsJ RNA 2'-O-methyltransferase 3, transcript variant X5
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_030966477.1
SIO_010081: FTSJ3
subclass of: SO_0000673
so part of: FTSJ3
location: join(863962..863981,864463..864589,864669..864774,866543..866589,866728..866807,866917..867016,867279..867473,868200..868315,868813..868917,869000..869100,869207..869287,869412..869564,869772..869907,869998..870194,870294..870414,870721..870814,871093..871252,871341..871417,871581..871677,871770..871953,872424..872518,872720..873566)
location: region:863962-873566:1
so has part: feature:863962-863981:1:exon
so has part: feature:864463-864589:1:exon
so has part: feature:864669-864774:1:exon
so has part: feature:866543-866589:1:exon
so has part: feature:866728-866807:1:exon
so has part: feature:866917-867016:1:exon
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so has part: feature:869998-870194:1:exon
so has part: feature:870294-870414:1:exon
so has part: feature:870721-870814:1:exon
so has part: feature:871093-871252:1:exon
so has part: feature:871341-871417:1:exon
so has part: feature:871581-871677:1:exon
so has part: feature:871770-871953:1:exon
so has part: feature:872424-872518:1:exon
so has part: feature:872720-873566:1:exon

position:863962:1
position: 863962
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:863962-863981:1:exon

position:863981:1
position: 863981
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:864463-864589:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:864669-864774:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:866543-866589:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:866728-866807:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:866917-867016:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:867279-867473:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:868200-868315:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:868813-868917:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:869000-869100:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:869207-869287:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:869412-869564:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:869772-869907:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:869998-870194:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:870294-870414:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:870721-870814:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:871093-871252:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:871341-871417:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:871581-871677:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:871770-871953:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:872424-872518:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:872720-873566:1:exon

FTSJ3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 87175
gene: FTSJ3
product: FtsJ RNA 2'-O-methyltransferase 3, transcript variant X6
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_030966478.1
SIO_010081: FTSJ3
subclass of: SO_0000673
so part of: FTSJ3
location: join(864089..864108,864463..864589,864669..864774,866543..866589,866728..866807,866917..867016,867279..867473,868200..868315,868813..868917,869000..869100,869207..869287,869412..869564,869772..869907,869998..870194,870294..870414,870721..870814,871093..871252,871341..871417,871581..871677,871770..871953,872424..872518,872720..873566)
location: region:864089-873566:1
so has part: feature:864089-864108:1:exon
so has part: feature:864463-864589:1:exon
so has part: feature:864669-864774:1:exon
so has part: feature:866543-866589:1:exon
so has part: feature:866728-866807:1:exon
so has part: feature:866917-867016:1:exon
so has part: feature:867279-867473:1:exon
so has part: feature:868200-868315:1:exon
so has part: feature:868813-868917:1:exon
so has part: feature:869000-869100:1:exon
so has part: feature:869207-869287:1:exon
so has part: feature:869412-869564:1:exon
so has part: feature:869772-869907:1:exon
so has part: feature:869998-870194:1:exon
so has part: feature:870294-870414:1:exon
so has part: feature:870721-870814:1:exon
so has part: feature:871093-871252:1:exon
so has part: feature:871341-871417:1:exon
so has part: feature:871581-871677:1:exon
so has part: feature:871770-871953:1:exon
so has part: feature:872424-872518:1:exon
so has part: feature:872720-873566:1:exon

position:864089:1
position: 864089
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:864089-864108:1:exon

position:864108:1
position: 864108
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:864463-864589:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:864669-864774:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:866543-866589:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:866728-866807:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:866917-867016:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:867279-867473:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:868200-868315:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:868813-868917:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:869000-869100:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:869207-869287:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:869412-869564:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:869772-869907:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:869998-870194:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:870294-870414:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:870721-870814:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:871093-871252:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:871341-871417:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:871581-871677:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:871770-871953:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:872424-872518:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:872720-873566:1:exon

FTSJ3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 87175
gene: FTSJ3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: pre-rRNA 2'-O-ribose RNA methyltransferase FTSJ3
translation: MGKKSKLGKSRRDKFYHLAKETGFRSRSSFKLLQLNRKFQFLQKARALLDLCAAPGGWLQVASKFMPVSSLIIGVDLVPIKPIPNVVTLQEDITTEKCRQALRKELQTWKVDVVLNDGAPNVGASWVHDAYSQANLTLMALKLACEFLCKGGWFITKVFRSRDYQPLMWIFQQFFQKVQATKPQASRNESAEIFVVCQGYQAPDKIDSKFFDPKYAFKDVEVVTKSVSELVSKKKPKAEGYAEGDTTLYHRFTLMDFLKAANPVDFLSKANEITLGDGELENHSSTTEELRQCCRDIRVLGRKELRALLNWRTKLRRFLAKKLKEQAKELDINLSSGEEEEGREEEKKEKMEAKAAAAEEEKEQEEVELALAEMKAKELAELKRKKKKILKEQRKQRERVELKMDLPGVSIADDGDTSMFSLKSIHRTPLLDELSRGDMASADALLEISPGDDDIYVSDHEEEDDVSLASDLDPEELLEIEARQRKLQQEQRGKRTKFKQKEEEEEGQEVENPLLVPLEEKSVLEERQTSLWFGKDAFAGIEDDADEELELGQAQMLAEKQREAQRDKTAKKGQKKKKKEAQEEAPAEPSPAAAPAPDASEEAKEEQSSDDDDSSSEDERPLAPVGRKRGRVEPCGFEVVPIEKPVKRVLDAEGLALGSVIVSSKKARRDLIDDSFNRYSYNEEEGELPEWFTEEERQHRRRQLPVDRQTVEAYRQRWKEINARPIKKVAEAKARKKKRMLKKLEQMKKKAEAVVSTVDISEREKVAQLRRIYKKAGLAKEKRQVTYLVAKKGVGRRVRRPPGVKGQFKVVDSRLKKDVRAQKRKEQKKKRHK
SIO_010081: FTSJ3
subclass of: SO_0000673
so part of: FTSJ3
location: join(864523..864589,864669..864774,866543..866589,866728..866807,866917..867016,867279..867473,868200..868315,868813..868917,869000..869100,869207..869287,869412..869564,869772..869907,869998..870194,870294..870414,870721..870814,871093..871252,871341..871417,871581..871677,871770..871953,872424..872518,872720..872909)
location: region:864523-872909:1
so has part: feature:864523-864589:1:exon
so has part: feature:864669-864774:1:exon
so has part: feature:866543-866589:1:exon
so has part: feature:866728-866807:1:exon
so has part: feature:866917-867016:1:exon
so has part: feature:867279-867473:1:exon
so has part: feature:868200-868315:1:exon
so has part: feature:868813-868917:1:exon
so has part: feature:869000-869100:1:exon
so has part: feature:869207-869287:1:exon
so has part: feature:869412-869564:1:exon
so has part: feature:869772-869907:1:exon
so has part: feature:869998-870194:1:exon
so has part: feature:870294-870414:1:exon
so has part: feature:870721-870814:1:exon
so has part: feature:871093-871252:1:exon
so has part: feature:871341-871417:1:exon
so has part: feature:871581-871677:1:exon
so has part: feature:871770-871953:1:exon
so has part: feature:872424-872518:1:exon
so has part: feature:872720-872909:1:exon

XP_030822333.1
type: Protein
SIO_000068: ncbiprotein

position:864523:1
position: 864523
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:872909:1
position: 872909
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:864523-864589:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:864669-864774:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:866543-866589:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:866728-866807:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:866917-867016:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:867279-867473:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:868200-868315:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:868813-868917:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:869000-869100:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:869207-869287:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:869412-869564:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:869772-869907:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:869998-870194:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:870294-870414:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:870721-870814:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:871093-871252:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:871341-871417:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:871581-871677:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:871770-871953:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:872424-872518:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:872720-872909:1:exon

FTSJ3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 87175
gene: FTSJ3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: pre-rRNA 2'-O-ribose RNA methyltransferase FTSJ3
translation: MGKKSKLGKSRRDKFYHLAKETGFRSRSSFKLLQLNRKFQFLQKARALLDLCAAPGGWLQVASKFMPVSSLIIGVDLVPIKPIPNVVTLQEDITTEKCRQALRKELQTWKVDVVLNDGAPNVGASWVHDAYSQANLTLMALKLACEFLCKGGWFITKVFRSRDYQPLMWIFQQFFQKVQATKPQASRNESAEIFVVCQGYQAPDKIDSKFFDPKYAFKDVEVVTKSVSELVSKKKPKAEGYAEGDTTLYHRFTLMDFLKAANPVDFLSKANEITLGDGELENHSSTTEELRQCCRDIRVLGRKELRALLNWRTKLRRFLAKKLKEQAKELDINLSSGEEEEGREEEKKEKMEAKAAAAEEEKEQEEVELALAEMKAKELAELKRKKKKILKEQRKQRERVELKMDLPGVSIADDGDTSMFSLKSIHRTPLLDELSRGDMASADALLEISPGDDDIYVSDHEEEDDVSLASDLDPEELLEIEARQRKLQQEQRGKRTKFKQKEEEEEGQEVENPLLVPLEEKSVLEERQTSLWFGKDAFAGIEDDADEELELGQAQMLAEKQREAQRDKTAKKGQKKKKKEAQEEAPAEPSPAAAPAPDASEEAKEEQSSDDDDSSSEDERPLAPVGRKRGRVEPCGFEVVPIEKPVKRVLDAEGLALGSVIVSSKKARRDLIDDSFNRYSYNEEEGELPEWFTEEERQHRRRQLPVDRQTVEAYRQRWKEINARPIKKVAEAKARKKKRMLKKLEQMKKKAEAVVSTVDISEREKVAQLRRIYKKAGLAKEKRQVTYLVAKKGVGRRVRRPPGVKGQFKVVDSRLKKDVRAQKRKEQKKKRHK
SIO_010081: FTSJ3
subclass of: SO_0000673
so part of: FTSJ3
location: join(864523..864589,864669..864774,866543..866589,866728..866807,866917..867016,867279..867473,868200..868315,868813..868917,869000..869100,869207..869287,869412..869564,869772..869907,869998..870194,870294..870414,870721..870814,871093..871252,871341..871417,871581..871677,871770..871953,872424..872518,872720..872909)
location: region:864523-872909:1
so has part: feature:864523-864589:1:exon
so has part: feature:864669-864774:1:exon
so has part: feature:866543-866589:1:exon
so has part: feature:866728-866807:1:exon
so has part: feature:866917-867016:1:exon
so has part: feature:867279-867473:1:exon
so has part: feature:868200-868315:1:exon
so has part: feature:868813-868917:1:exon
so has part: feature:869000-869100:1:exon
so has part: feature:869207-869287:1:exon
so has part: feature:869412-869564:1:exon
so has part: feature:869772-869907:1:exon
so has part: feature:869998-870194:1:exon
so has part: feature:870294-870414:1:exon
so has part: feature:870721-870814:1:exon
so has part: feature:871093-871252:1:exon
so has part: feature:871341-871417:1:exon
so has part: feature:871581-871677:1:exon
so has part: feature:871770-871953:1:exon
so has part: feature:872424-872518:1:exon
so has part: feature:872720-872909:1:exon

XP_030822334.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:864523-864589:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:864669-864774:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:866543-866589:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:866728-866807:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:866917-867016:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:867279-867473:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:868200-868315:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:868813-868917:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:869000-869100:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:869207-869287:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:869412-869564:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:869772-869907:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:869998-870194:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:870294-870414:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:870721-870814:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:871093-871252:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:871341-871417:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:871581-871677:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:871770-871953:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:872424-872518:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:872720-872909:1:exon

FTSJ3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 87175
gene: FTSJ3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: pre-rRNA 2'-O-ribose RNA methyltransferase FTSJ3
translation: MGKKSKLGKSRRDKFYHLAKETGFRSRSSFKLLQLNRKFQFLQKARALLDLCAAPGGWLQVASKFMPVSSLIIGVDLVPIKPIPNVVTLQEDITTEKCRQALRKELQTWKVDVVLNDGAPNVGASWVHDAYSQANLTLMALKLACEFLCKGGWFITKVFRSRDYQPLMWIFQQFFQKVQATKPQASRNESAEIFVVCQGYQAPDKIDSKFFDPKYAFKDVEVVTKSVSELVSKKKPKAEGYAEGDTTLYHRFTLMDFLKAANPVDFLSKANEITLGDGELENHSSTTEELRQCCRDIRVLGRKELRALLNWRTKLRRFLAKKLKEQAKELDINLSSGEEEEGREEEKKEKMEAKAAAAEEEKEQEEVELALAEMKAKELAELKRKKKKILKEQRKQRERVELKMDLPGVSIADDGDTSMFSLKSIHRTPLLDELSRGDMASADALLEISPGDDDIYVSDHEEEDDVSLASDLDPEELLEIEARQRKLQQEQRGKRTKFKQKEEEEEGQEVENPLLVPLEEKSVLEERQTSLWFGKDAFAGIEDDADEELELGQAQMLAEKQREAQRDKTAKKGQKKKKKEAQEEAPAEPSPAAAPAPDASEEAKEEQSSDDDDSSSEDERPLAPVGRKRGRVEPCGFEVVPIEKPVKRVLDAEGLALGSVIVSSKKARRDLIDDSFNRYSYNEEEGELPEWFTEEERQHRRRQLPVDRQTVEAYRQRWKEINARPIKKVAEAKARKKKRMLKKLEQMKKKAEAVVSTVDISEREKVAQLRRIYKKAGLAKEKRQVTYLVAKKGVGRRVRRPPGVKGQFKVVDSRLKKDVRAQKRKEQKKKRHK
SIO_010081: FTSJ3
subclass of: SO_0000673
so part of: FTSJ3
location: join(864523..864589,864669..864774,866543..866589,866728..866807,866917..867016,867279..867473,868200..868315,868813..868917,869000..869100,869207..869287,869412..869564,869772..869907,869998..870194,870294..870414,870721..870814,871093..871252,871341..871417,871581..871677,871770..871953,872424..872518,872720..872909)
location: region:864523-872909:1
so has part: feature:864523-864589:1:exon
so has part: feature:864669-864774:1:exon
so has part: feature:866543-866589:1:exon
so has part: feature:866728-866807:1:exon
so has part: feature:866917-867016:1:exon
so has part: feature:867279-867473:1:exon
so has part: feature:868200-868315:1:exon
so has part: feature:868813-868917:1:exon
so has part: feature:869000-869100:1:exon
so has part: feature:869207-869287:1:exon
so has part: feature:869412-869564:1:exon
so has part: feature:869772-869907:1:exon
so has part: feature:869998-870194:1:exon
so has part: feature:870294-870414:1:exon
so has part: feature:870721-870814:1:exon
so has part: feature:871093-871252:1:exon
so has part: feature:871341-871417:1:exon
so has part: feature:871581-871677:1:exon
so has part: feature:871770-871953:1:exon
so has part: feature:872424-872518:1:exon
so has part: feature:872720-872909:1:exon

XP_030822335.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:864523-864589:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:864669-864774:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:866543-866589:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:866728-866807:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:866917-867016:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:867279-867473:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:868200-868315:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:868813-868917:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:869000-869100:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:869207-869287:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:869412-869564:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:869772-869907:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:869998-870194:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:870294-870414:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:870721-870814:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:871093-871252:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:871341-871417:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:871581-871677:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:871770-871953:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:872424-872518:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:872720-872909:1:exon

FTSJ3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 87175
gene: FTSJ3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: pre-rRNA 2'-O-ribose RNA methyltransferase FTSJ3
translation: MGKKSKLGKSRRDKFYHLAKETGFRSRSSFKLLQLNRKFQFLQKARALLDLCAAPGGWLQVASKFMPVSSLIIGVDLVPIKPIPNVVTLQEDITTEKCRQALRKELQTWKVDVVLNDGAPNVGASWVHDAYSQANLTLMALKLACEFLCKGGWFITKVFRSRDYQPLMWIFQQFFQKVQATKPQASRNESAEIFVVCQGYQAPDKIDSKFFDPKYAFKDVEVVTKSVSELVSKKKPKAEGYAEGDTTLYHRFTLMDFLKAANPVDFLSKANEITLGDGELENHSSTTEELRQCCRDIRVLGRKELRALLNWRTKLRRFLAKKLKEQAKELDINLSSGEEEEGREEEKKEKMEAKAAAAEEEKEQEEVELALAEMKAKELAELKRKKKKILKEQRKQRERVELKMDLPGVSIADDGDTSMFSLKSIHRTPLLDELSRGDMASADALLEISPGDDDIYVSDHEEEDDVSLASDLDPEELLEIEARQRKLQQEQRGKRTKFKQKEEEEEGQEVENPLLVPLEEKSVLEERQTSLWFGKDAFAGIEDDADEELELGQAQMLAEKQREAQRDKTAKKGQKKKKKEAQEEAPAEPSPAAAPAPDASEEAKEEQSSDDDDSSSEDERPLAPVGRKRGRVEPCGFEVVPIEKPVKRVLDAEGLALGSVIVSSKKARRDLIDDSFNRYSYNEEEGELPEWFTEEERQHRRRQLPVDRQTVEAYRQRWKEINARPIKKVAEAKARKKKRMLKKLEQMKKKAEAVVSTVDISEREKVAQLRRIYKKAGLAKEKRQVTYLVAKKGVGRRVRRPPGVKGQFKVVDSRLKKDVRAQKRKEQKKKRHK
SIO_010081: FTSJ3
subclass of: SO_0000673
so part of: FTSJ3
location: join(864523..864589,864669..864774,866543..866589,866728..866807,866917..867016,867279..867473,868200..868315,868813..868917,869000..869100,869207..869287,869412..869564,869772..869907,869998..870194,870294..870414,870721..870814,871093..871252,871341..871417,871581..871677,871770..871953,872424..872518,872720..872909)
location: region:864523-872909:1
so has part: feature:864523-864589:1:exon
so has part: feature:864669-864774:1:exon
so has part: feature:866543-866589:1:exon
so has part: feature:866728-866807:1:exon
so has part: feature:866917-867016:1:exon
so has part: feature:867279-867473:1:exon
so has part: feature:868200-868315:1:exon
so has part: feature:868813-868917:1:exon
so has part: feature:869000-869100:1:exon
so has part: feature:869207-869287:1:exon
so has part: feature:869412-869564:1:exon
so has part: feature:869772-869907:1:exon
so has part: feature:869998-870194:1:exon
so has part: feature:870294-870414:1:exon
so has part: feature:870721-870814:1:exon
so has part: feature:871093-871252:1:exon
so has part: feature:871341-871417:1:exon
so has part: feature:871581-871677:1:exon
so has part: feature:871770-871953:1:exon
so has part: feature:872424-872518:1:exon
so has part: feature:872720-872909:1:exon

XP_030822336.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:864523-864589:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:864669-864774:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:866543-866589:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:866728-866807:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:866917-867016:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:867279-867473:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:868200-868315:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:868813-868917:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:869000-869100:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:869207-869287:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:869412-869564:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:869772-869907:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:869998-870194:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:870294-870414:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:870721-870814:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:871093-871252:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:871341-871417:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:871581-871677:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:871770-871953:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:872424-872518:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:872720-872909:1:exon

FTSJ3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 87175
gene: FTSJ3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: pre-rRNA 2'-O-ribose RNA methyltransferase FTSJ3
translation: MGKKSKLGKSRRDKFYHLAKETGFRSRSSFKLLQLNRKFQFLQKARALLDLCAAPGGWLQVASKFMPVSSLIIGVDLVPIKPIPNVVTLQEDITTEKCRQALRKELQTWKVDVVLNDGAPNVGASWVHDAYSQANLTLMALKLACEFLCKGGWFITKVFRSRDYQPLMWIFQQFFQKVQATKPQASRNESAEIFVVCQGYQAPDKIDSKFFDPKYAFKDVEVVTKSVSELVSKKKPKAEGYAEGDTTLYHRFTLMDFLKAANPVDFLSKANEITLGDGELENHSSTTEELRQCCRDIRVLGRKELRALLNWRTKLRRFLAKKLKEQAKELDINLSSGEEEEGREEEKKEKMEAKAAAAEEEKEQEEVELALAEMKAKELAELKRKKKKILKEQRKQRERVELKMDLPGVSIADDGDTSMFSLKSIHRTPLLDELSRGDMASADALLEISPGDDDIYVSDHEEEDDVSLASDLDPEELLEIEARQRKLQQEQRGKRTKFKQKEEEEEGQEVENPLLVPLEEKSVLEERQTSLWFGKDAFAGIEDDADEELELGQAQMLAEKQREAQRDKTAKKGQKKKKKEAQEEAPAEPSPAAAPAPDASEEAKEEQSSDDDDSSSEDERPLAPVGRKRGRVEPCGFEVVPIEKPVKRVLDAEGLALGSVIVSSKKARRDLIDDSFNRYSYNEEEGELPEWFTEEERQHRRRQLPVDRQTVEAYRQRWKEINARPIKKVAEAKARKKKRMLKKLEQMKKKAEAVVSTVDISEREKVAQLRRIYKKAGLAKEKRQVTYLVAKKGVGRRVRRPPGVKGQFKVVDSRLKKDVRAQKRKEQKKKRHK
SIO_010081: FTSJ3
subclass of: SO_0000673
so part of: FTSJ3
location: join(864523..864589,864669..864774,866543..866589,866728..866807,866917..867016,867279..867473,868200..868315,868813..868917,869000..869100,869207..869287,869412..869564,869772..869907,869998..870194,870294..870414,870721..870814,871093..871252,871341..871417,871581..871677,871770..871953,872424..872518,872720..872909)
location: region:864523-872909:1
so has part: feature:864523-864589:1:exon
so has part: feature:864669-864774:1:exon
so has part: feature:866543-866589:1:exon
so has part: feature:866728-866807:1:exon
so has part: feature:866917-867016:1:exon
so has part: feature:867279-867473:1:exon
so has part: feature:868200-868315:1:exon
so has part: feature:868813-868917:1:exon
so has part: feature:869000-869100:1:exon
so has part: feature:869207-869287:1:exon
so has part: feature:869412-869564:1:exon
so has part: feature:869772-869907:1:exon
so has part: feature:869998-870194:1:exon
so has part: feature:870294-870414:1:exon
so has part: feature:870721-870814:1:exon
so has part: feature:871093-871252:1:exon
so has part: feature:871341-871417:1:exon
so has part: feature:871581-871677:1:exon
so has part: feature:871770-871953:1:exon
so has part: feature:872424-872518:1:exon
so has part: feature:872720-872909:1:exon

XP_030822337.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:864523-864589:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:864669-864774:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:866543-866589:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:866728-866807:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:866917-867016:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:867279-867473:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:868200-868315:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:868813-868917:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:869000-869100:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:869207-869287:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:869412-869564:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:869772-869907:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:869998-870194:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:870294-870414:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:870721-870814:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:871093-871252:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:871341-871417:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:871581-871677:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:871770-871953:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:872424-872518:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:872720-872909:1:exon

FTSJ3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 87175
gene: FTSJ3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: pre-rRNA 2'-O-ribose RNA methyltransferase FTSJ3
translation: MGKKSKLGKSRRDKFYHLAKETGFRSRSSFKLLQLNRKFQFLQKARALLDLCAAPGGWLQVASKFMPVSSLIIGVDLVPIKPIPNVVTLQEDITTEKCRQALRKELQTWKVDVVLNDGAPNVGASWVHDAYSQANLTLMALKLACEFLCKGGWFITKVFRSRDYQPLMWIFQQFFQKVQATKPQASRNESAEIFVVCQGYQAPDKIDSKFFDPKYAFKDVEVVTKSVSELVSKKKPKAEGYAEGDTTLYHRFTLMDFLKAANPVDFLSKANEITLGDGELENHSSTTEELRQCCRDIRVLGRKELRALLNWRTKLRRFLAKKLKEQAKELDINLSSGEEEEGREEEKKEKMEAKAAAAEEEKEQEEVELALAEMKAKELAELKRKKKKILKEQRKQRERVELKMDLPGVSIADDGDTSMFSLKSIHRTPLLDELSRGDMASADALLEISPGDDDIYVSDHEEEDDVSLASDLDPEELLEIEARQRKLQQEQRGKRTKFKQKEEEEEGQEVENPLLVPLEEKSVLEERQTSLWFGKDAFAGIEDDADEELELGQAQMLAEKQREAQRDKTAKKGQKKKKKEAQEEAPAEPSPAAAPAPDASEEAKEEQSSDDDDSSSEDERPLAPVGRKRGRVEPCGFEVVPIEKPVKRVLDAEGLALGSVIVSSKKARRDLIDDSFNRYSYNEEEGELPEWFTEEERQHRRRQLPVDRQTVEAYRQRWKEINARPIKKVAEAKARKKKRMLKKLEQMKKKAEAVVSTVDISEREKVAQLRRIYKKAGLAKEKRQVTYLVAKKGVGRRVRRPPGVKGQFKVVDSRLKKDVRAQKRKEQKKKRHK
SIO_010081: FTSJ3
subclass of: SO_0000673
so part of: FTSJ3
location: join(864523..864589,864669..864774,866543..866589,866728..866807,866917..867016,867279..867473,868200..868315,868813..868917,869000..869100,869207..869287,869412..869564,869772..869907,869998..870194,870294..870414,870721..870814,871093..871252,871341..871417,871581..871677,871770..871953,872424..872518,872720..872909)
location: region:864523-872909:1
so has part: feature:864523-864589:1:exon
so has part: feature:864669-864774:1:exon
so has part: feature:866543-866589:1:exon
so has part: feature:866728-866807:1:exon
so has part: feature:866917-867016:1:exon
so has part: feature:867279-867473:1:exon
so has part: feature:868200-868315:1:exon
so has part: feature:868813-868917:1:exon
so has part: feature:869000-869100:1:exon
so has part: feature:869207-869287:1:exon
so has part: feature:869412-869564:1:exon
so has part: feature:869772-869907:1:exon
so has part: feature:869998-870194:1:exon
so has part: feature:870294-870414:1:exon
so has part: feature:870721-870814:1:exon
so has part: feature:871093-871252:1:exon
so has part: feature:871341-871417:1:exon
so has part: feature:871581-871677:1:exon
so has part: feature:871770-871953:1:exon
so has part: feature:872424-872518:1:exon
so has part: feature:872720-872909:1:exon

XP_030822338.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:864523-864589:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:864669-864774:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:866543-866589:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:866728-866807:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:866917-867016:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:867279-867473:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:868200-868315:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:868813-868917:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:869000-869100:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:869207-869287:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:869412-869564:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:869772-869907:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:869998-870194:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:870294-870414:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:870721-870814:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:871093-871252:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:871341-871417:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:871581-871677:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:871770-871953:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:872424-872518:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:872720-872909:1:exon

LOC115913772
type: Gene
subclass of: SO_0000704
RO_0002162: 87175
gene: LOC115913772
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(874176..888732)
location: region:874176-888732:-1
so has part: feature:874176-888732:-1:exon
subclass of: SO_0000010

115913772
type: Gene
SIO_000068: ncbigene

position:874176:-1
position: 874176
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:888732:-1
position: 888732
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:874176-888732:-1:exon

LOC115913772
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 87175
gene: LOC115913772
product: alpha-2-macroglobulin-like protein 1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 20 Proteins, and 21% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_030965998.1
SIO_010081: LOC115913772
subclass of: SO_0000673
so part of: LOC115913772
location: complement(join(874176..874192,874631..874672,874832..874934,875023..875091,875233..875323,875406..875524,875595..875810,875901..876118,876219..876375,876543..876617,876725..876881,876974..877055,877162..877338,877487..877561,877756..877807,877950..878071,878300..878426,878583..878808,878948..879107,879328..879409,879627..879728,879887..880036,880614..880759,881007..881064,881385..881606,881717..881881,882299..882408,883435..883555,883632..883743,884213..884309,885361..885514,885611..885631,886111..886163,886641..886803,887679..887868,888545..888732))
location: region:874176-888732:-1
so has part: feature:888545-888732:-1:exon
so has part: feature:887679-887868:-1:exon
so has part: feature:886641-886803:-1:exon
so has part: feature:886111-886163:-1:exon
so has part: feature:885611-885631:-1:exon
so has part: feature:885361-885514:-1:exon
so has part: feature:884213-884309:-1:exon
so has part: feature:883632-883743:-1:exon
so has part: feature:883435-883555:-1:exon
so has part: feature:882299-882408:-1:exon
so has part: feature:881717-881881:-1:exon
so has part: feature:881385-881606:-1:exon
so has part: feature:881007-881064:-1:exon
so has part: feature:880614-880759:-1:exon
so has part: feature:879887-880036:-1:exon
so has part: feature:879627-879728:-1:exon
so has part: feature:879328-879409:-1:exon
so has part: feature:878948-879107:-1:exon
so has part: feature:878583-878808:-1:exon
so has part: feature:878300-878426:-1:exon
so has part: feature:877950-878071:-1:exon
so has part: feature:877756-877807:-1:exon
so has part: feature:877487-877561:-1:exon
so has part: feature:877162-877338:-1:exon
so has part: feature:876974-877055:-1:exon
so has part: feature:876725-876881:-1:exon
so has part: feature:876543-876617:-1:exon
so has part: feature:876219-876375:-1:exon
so has part: feature:875901-876118:-1:exon
so has part: feature:875595-875810:-1:exon
so has part: feature:875406-875524:-1:exon
so has part: feature:875233-875323:-1:exon
so has part: feature:875023-875091:-1:exon
so has part: feature:874832-874934:-1:exon
so has part: feature:874631-874672:-1:exon
so has part: feature:874176-874192:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:888545-888732:-1:exon

position:888545:-1
position: 888545
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:887679-887868:-1:exon

position:887679:-1
position: 887679
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:887868:-1
position: 887868
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:886641-886803:-1:exon

position:886641:-1
position: 886641
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:886803:-1
position: 886803
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:886111-886163:-1:exon

position:886111:-1
position: 886111
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:886163:-1
position: 886163
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:885611-885631:-1:exon

position:885611:-1
position: 885611
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:885631:-1
position: 885631
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:885361-885514:-1:exon

position:885361:-1
position: 885361
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:885514:-1
position: 885514
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:884213-884309:-1:exon

position:884213:-1
position: 884213
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:884309:-1
position: 884309
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:883632-883743:-1:exon

position:883632:-1
position: 883632
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:883743:-1
position: 883743
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:883435-883555:-1:exon

position:883435:-1
position: 883435
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:883555:-1
position: 883555
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:882299-882408:-1:exon

position:882299:-1
position: 882299
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:882408:-1
position: 882408
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:881717-881881:-1:exon

position:881717:-1
position: 881717
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:881881:-1
position: 881881
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:881385-881606:-1:exon

position:881385:-1
position: 881385
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:881606:-1
position: 881606
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:881007-881064:-1:exon

position:881007:-1
position: 881007
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:881064:-1
position: 881064
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:880614-880759:-1:exon

position:880614:-1
position: 880614
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:880759:-1
position: 880759
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:879887-880036:-1:exon

position:879887:-1
position: 879887
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:880036:-1
position: 880036
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:879627-879728:-1:exon

position:879627:-1
position: 879627
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:879728:-1
position: 879728
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:879328-879409:-1:exon

position:879328:-1
position: 879328
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:879409:-1
position: 879409
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:878948-879107:-1:exon

position:878948:-1
position: 878948
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:879107:-1
position: 879107
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:878583-878808:-1:exon

position:878583:-1
position: 878583
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:878808:-1
position: 878808
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:878300-878426:-1:exon

position:878300:-1
position: 878300
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:878426:-1
position: 878426
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:877950-878071:-1:exon

position:877950:-1
position: 877950
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:878071:-1
position: 878071
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 22
SIO_000628: feature:877756-877807:-1:exon

position:877756:-1
position: 877756
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:877807:-1
position: 877807
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 23
SIO_000628: feature:877487-877561:-1:exon

position:877487:-1
position: 877487
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:877561:-1
position: 877561
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 24
SIO_000628: feature:877162-877338:-1:exon

position:877162:-1
position: 877162
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:877338:-1
position: 877338
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 25
SIO_000628: feature:876974-877055:-1:exon

position:876974:-1
position: 876974
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:877055:-1
position: 877055
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 26
SIO_000628: feature:876725-876881:-1:exon

position:876725:-1
position: 876725
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:876881:-1
position: 876881
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 27
SIO_000628: feature:876543-876617:-1:exon

position:876543:-1
position: 876543
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:876617:-1
position: 876617
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 28
SIO_000628: feature:876219-876375:-1:exon

position:876219:-1
position: 876219
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:876375:-1
position: 876375
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 29
SIO_000628: feature:875901-876118:-1:exon

position:875901:-1
position: 875901
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:876118:-1
position: 876118
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 30
SIO_000628: feature:875595-875810:-1:exon

position:875595:-1
position: 875595
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:875810:-1
position: 875810
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 31
SIO_000628: feature:875406-875524:-1:exon

position:875406:-1
position: 875406
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:875524:-1
position: 875524
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 32
SIO_000628: feature:875233-875323:-1:exon

position:875233:-1
position: 875233
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:875323:-1
position: 875323
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 33
SIO_000628: feature:875023-875091:-1:exon

position:875023:-1
position: 875023
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:875091:-1
position: 875091
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 34
SIO_000628: feature:874832-874934:-1:exon

position:874832:-1
position: 874832
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:874934:-1
position: 874934
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 35
SIO_000628: feature:874631-874672:-1:exon

position:874631:-1
position: 874631
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:874672:-1
position: 874672
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 36
SIO_000628: feature:874176-874192:-1:exon

position:874192:-1
position: 874192
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC115913772
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 87175
gene: LOC115913772
note: The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: substituted 1 base at 1 genomic stop codon; Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
transl except: (pos:complement(883632..883634),aa:OTHER)
product: LOW QUALITY PROTEIN: alpha-2-macroglobulin-like protein 1
translation: MAGTQAPIAEPAADQTQIQSDPRAAGGGCGCSQHPHPAGDMMCPALPTLFTILLLSAGASGAPSFVVVSPAVLYHPHPATLWVHLRDLQGPVQLRVQLQGDSGIPPTTLLSREVLEPHLYLNITFPAPAPAQGKEEIVALHVSIRGESLDVSEKKKVMLRALSPGVFIQTDKAVYKPGQEVKFRVVSLDKDLIPSSQKLPLVFLQDPSGNRIAQWRELSPRQGIVDLSLPLASEPALGTYTISVGGKRHSFSVEEYVLPKFEVTIHLPSCGSRMLWEQDEKLPVEICGRYTYGKPVRGKVQADLCLRQSLWAHGIEKICTRLWGRXTEKNGCFSTEVSLAASKEKILPPFFRKKLEVEASLVEDGTGLEMKSTKSCMVLPKTVTVTFENPDHDYKPGLPYTGTIQLQGADGSGLTQRQVLLSISNQGKERTQSFLTDSSGRASFQLDTSGWSDWVSLWAEVNRTAESQEGSLRPRGASLMLMPYSSKSGSFLHIRTPRGELPCGRSQLLHVDSIFGKEALGPELKSLDLVFMVLAKGSITSIFRKEVSAEPGQRASLSLELPIGLELAPMARLLVYVLLPNGEMVADSTELSVAKCFPNQVQMAFSEARALPGAALRLQLGAAPGSLCAVRAVDRSVLLLKPEAELNAEAVYKALPEFINPHSIQDEPLCDWLDSKRGPYQLFQDAALKLFTKTREPCPPRLPIVGMPGPAGDMTLYRVEVGSNTHEEIMPLFTSASSGTEGGEEPPAPRTYFPETWLWDLVPVGESGSAEMMVTVPDAITEWEAGMFCTAPQGLGLSPAVTLTAFQPFFVELALPYAVVRHESFTLRATVFNYLRQCLRVQVTLAESAELEVSPSAGDTYRGCVCADEAKTFQWGVRATSLGEVNITVSTEALSSTEPCGNELSLVPAQGRVDTVIKPLLVQPGGILVEKTHSSLLCQEGAEEVSLEIPANILESSQRAHINVMGDILGNALQNLDRLLAMPYGCGEQNMVRFAPNIYIQQYLEKTGQLLPDVRAKAQGFLQSGYQRELLYKHDDGSYSAFGKSDSSGNTWLTAFVLKSFGQARAYMAIEERHITDALRWLQQRQRKSGCFRRVGKLFQNTLQGGVSDELSLSAYVTAAMLELGLPTLEPVLSSALKCLEASPTDDPYTQALLAYVFGLAGLREQQQAQLQRLAQHSVSADGQLYWKRKGQAQKALELSWAAAPSAEVEMTAYVLLAYLSQPSMSPADLGTASRIVRWLCKQQNPYGGFASTQDTVVALQALAKYAALTYGSNGDVTVTVTSPTGTLQDFVLDSSNRLVLQQAALPELPGTYGLRARGQGCALAQVTLRYNVPPPPSTGAFELRVETEPLAGTKNPRFLLRLRARYSGERPATNMVVIEAKLPSGYSPDKKSTVELKRQNLVKKVEVQPDQVTIYLDELSKEEKTFSFQAQQDFLVSNLQPATVSLYDYYETGDRVDVAYTAPPSSENENV
SIO_010081: LOC115913772
subclass of: SO_0000673
so part of: LOC115913772
location: complement(join(874176..874192,874631..874672,874832..874934,875023..875091,875233..875323,875406..875524,875595..875810,875901..876118,876219..876375,876543..876617,876725..876881,876974..877055,877162..877338,877487..877561,877756..877807,877950..878071,878300..878426,878583..878808,878948..879107,879328..879409,879627..879728,879887..880036,880614..880759,881007..881064,881385..881606,881717..881881,882299..882408,883435..883555,883632..883743,884213..884309,885361..885514,885611..885631,886111..886163,886641..886803,887679..887868,888545..888732))
location: region:874176-888732:-1
so has part: feature:888545-888732:-1:exon
so has part: feature:887679-887868:-1:exon
so has part: feature:886641-886803:-1:exon
so has part: feature:886111-886163:-1:exon
so has part: feature:885611-885631:-1:exon
so has part: feature:885361-885514:-1:exon
so has part: feature:884213-884309:-1:exon
so has part: feature:883632-883743:-1:exon
so has part: feature:883435-883555:-1:exon
so has part: feature:882299-882408:-1:exon
so has part: feature:881717-881881:-1:exon
so has part: feature:881385-881606:-1:exon
so has part: feature:881007-881064:-1:exon
so has part: feature:880614-880759:-1:exon
so has part: feature:879887-880036:-1:exon
so has part: feature:879627-879728:-1:exon
so has part: feature:879328-879409:-1:exon
so has part: feature:878948-879107:-1:exon
so has part: feature:878583-878808:-1:exon
so has part: feature:878300-878426:-1:exon
so has part: feature:877950-878071:-1:exon
so has part: feature:877756-877807:-1:exon
so has part: feature:877487-877561:-1:exon
so has part: feature:877162-877338:-1:exon
so has part: feature:876974-877055:-1:exon
so has part: feature:876725-876881:-1:exon
so has part: feature:876543-876617:-1:exon
so has part: feature:876219-876375:-1:exon
so has part: feature:875901-876118:-1:exon
so has part: feature:875595-875810:-1:exon
so has part: feature:875406-875524:-1:exon
so has part: feature:875233-875323:-1:exon
so has part: feature:875023-875091:-1:exon
so has part: feature:874832-874934:-1:exon
so has part: feature:874631-874672:-1:exon
so has part: feature:874176-874192:-1:exon

XP_030821858.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:888545-888732:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:887679-887868:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:886641-886803:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:886111-886163:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:885611-885631:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:885361-885514:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:884213-884309:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:883632-883743:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:883435-883555:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:882299-882408:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:881717-881881:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:881385-881606:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:881007-881064:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:880614-880759:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:879887-880036:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:879627-879728:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:879328-879409:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:878948-879107:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:878583-878808:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:878300-878426:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:877950-878071:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:877756-877807:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:877487-877561:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:877162-877338:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:876974-877055:-1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:876725-876881:-1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:876543-876617:-1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:876219-876375:-1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:875901-876118:-1:exon

urn:…
SIO_000300: 30
SIO_000628: feature:875595-875810:-1:exon

urn:…
SIO_000300: 31
SIO_000628: feature:875406-875524:-1:exon

urn:…
SIO_000300: 32
SIO_000628: feature:875233-875323:-1:exon

urn:…
SIO_000300: 33
SIO_000628: feature:875023-875091:-1:exon

urn:…
SIO_000300: 34
SIO_000628: feature:874832-874934:-1:exon

urn:…
SIO_000300: 35
SIO_000628: feature:874631-874672:-1:exon

urn:…
SIO_000300: 36
SIO_000628: feature:874176-874192:-1:exon

AGPAT1
type: Gene
subclass of: SO_0000704
RO_0002162: 87175
gene: AGPAT1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(893205..900052)
location: region:893205-900052:-1
so has part: feature:893205-900052:-1:exon
subclass of: SO_0000010

115914072
type: Gene
SIO_000068: ncbigene

position:893205:-1
position: 893205
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:900052:-1
position: 900052
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:893205-900052:-1:exon

AGPAT1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 87175
gene: AGPAT1
product: 1-acylglycerol-3-phosphate O-acyltransferase 1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 28 Proteins
transcript id: XM_030966428.1
SIO_010081: AGPAT1
subclass of: SO_0000673
so part of: AGPAT1
location: complement(join(893205..893428,893595..893667,894139..894234,895753..895928,896440..896573,899871..900052))
location: region:893205-900052:-1
so has part: feature:899871-900052:-1:exon
so has part: feature:896440-896573:-1:exon
so has part: feature:895753-895928:-1:exon
so has part: feature:894139-894234:-1:exon
so has part: feature:893595-893667:-1:exon
so has part: feature:893205-893428:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:899871-900052:-1:exon

position:899871:-1
position: 899871
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:896440-896573:-1:exon

position:896440:-1
position: 896440
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:896573:-1
position: 896573
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:895753-895928:-1:exon

position:895753:-1
position: 895753
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:895928:-1
position: 895928
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:894139-894234:-1:exon

position:894139:-1
position: 894139
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:894234:-1
position: 894234
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:893595-893667:-1:exon

position:893595:-1
position: 893595
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:893667:-1
position: 893667
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:893205-893428:-1:exon

position:893428:-1
position: 893428
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

AGPAT1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 87175
gene: AGPAT1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: 1-acyl-sn-glycerol-3-phosphate acyltransferase alpha
translation: MDLLLLQGLLLLPLAALLLYRCSPRFQFLCKVAFFNCWIVALATLLSPLAAFRGRSVENMRLLRAALLPLKRFYGIRMRVRGSERLRLPGPFVIVCNHQASLDLMGMVEVIPERCVPIAKRELLYLGTVGWACWLSGIIFIERQRRDTAIEVISRTASTMRRENLRVWVFPEGTRNPGRSMLPFKRGAFHLAVQAQVPIVPIVISPYRDFFSPKEKRFTSGTCTIQVLPRVETCGLSPKDVPKLTESVHQAMAEALAEMSMSDHGDQDTEQPLLGPGEDRDSPQGQGDTARSSK
SIO_010081: AGPAT1
subclass of: SO_0000673
so part of: AGPAT1
location: complement(join(893205..893428,893595..893667,894139..894234,895753..895928,896440..896573,899871..900052))
location: region:893205-900052:-1
so has part: feature:899871-900052:-1:exon
so has part: feature:896440-896573:-1:exon
so has part: feature:895753-895928:-1:exon
so has part: feature:894139-894234:-1:exon
so has part: feature:893595-893667:-1:exon
so has part: feature:893205-893428:-1:exon

XP_030822288.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:899871-900052:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:896440-896573:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:895753-895928:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:894139-894234:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:893595-893667:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:893205-893428:-1:exon

LOC115913773
type: Gene
subclass of: SO_0000704
RO_0002162: 87175
gene: LOC115913773
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 917697..929185
location: region:917697-929185:1
so has part: feature:917697-929185:1:exon
subclass of: SO_0000010

115913773
type: Gene
SIO_000068: ncbigene

position:917697:1
position: 917697
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:929185:1
position: 929185
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:917697-929185:1:exon

LOC115913773
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 87175
gene: LOC115913773
product: vasoactive intestinal polypeptide receptor 1-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 11 Proteins
transcript id: XM_030965999.1
SIO_010081: LOC115913773
subclass of: SO_0000673
so part of: LOC115913773
location: join(917697..917765,920611..920716,923871..923978,924734..924843,925311..925408,926244..926376,926986..927139,927649..927709,927990..928056,928161..928252,928522..928651,928878..928919,929093..929185)
location: region:917697-929185:1
so has part: feature:917697-917765:1:exon
so has part: feature:920611-920716:1:exon
so has part: feature:923871-923978:1:exon
so has part: feature:924734-924843:1:exon
so has part: feature:925311-925408:1:exon
so has part: feature:926244-926376:1:exon
so has part: feature:926986-927139:1:exon
so has part: feature:927649-927709:1:exon
so has part: feature:927990-928056:1:exon
so has part: feature:928161-928252:1:exon
so has part: feature:928522-928651:1:exon
so has part: feature:928878-928919:1:exon
so has part: feature:929093-929185:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:917697-917765:1:exon

position:917765:1
position: 917765
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:920611-920716:1:exon

position:920611:1
position: 920611
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:920716:1
position: 920716
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:923871-923978:1:exon

position:923871:1
position: 923871
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:923978:1
position: 923978
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:924734-924843:1:exon

position:924734:1
position: 924734
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:924843:1
position: 924843
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:925311-925408:1:exon

position:925311:1
position: 925311
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:925408:1
position: 925408
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:926244-926376:1:exon

position:926244:1
position: 926244
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:926376:1
position: 926376
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:926986-927139:1:exon

position:926986:1
position: 926986
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:927139:1
position: 927139
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:927649-927709:1:exon

position:927649:1
position: 927649
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:927709:1
position: 927709
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:927990-928056:1:exon

position:927990:1
position: 927990
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:928056:1
position: 928056
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:928161-928252:1:exon

position:928161:1
position: 928161
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:928252:1
position: 928252
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:928522-928651:1:exon

position:928522:1
position: 928522
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:928651:1
position: 928651
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:928878-928919:1:exon

position:928878:1
position: 928878
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:928919:1
position: 928919
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:929093-929185:1:exon

position:929093:1
position: 929093
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC115913773
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 87175
gene: LOC115913773
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: vasoactive intestinal polypeptide receptor 1-like
translation: MGGPWRPTRPRSLLLLLLLPTLQGTHPDCSIVLHFQELEEECLQRIRSESRSPGQAGQGCPTEWDGLSCWPALPLGQSRGVACPEILSVFKKSKGLIQRNCTEWGWSPPSPPYHSACQLETLGSSNDTEAKRGHFVTMKVLYTCGYSTSLAALLLAIAIFCCFRKLHCTRNSIHIHFFTSFILRGTAVFIKDRVLFSDESIDHCTMSTVTCKAAIAFFQYSVLANFYWLLVEGLYLQTLLLLTFTCDRSYTWGYVLMGWGVPMVTVGVWVLTRLQYDNHGCWDDYSSVYWWVIKAPILLAIFVNFLIFLNVTRMLAQKIRCPDLSRTHKQQYMRLTKSTLLLIPLFGVHYVVFALFPEHVGVDARLYFELVLGSYQGFLVALLYCFLNGEVQAEIRRNWGTWQRSMESNVFNLATQDFTA
SIO_010081: LOC115913773
subclass of: SO_0000673
so part of: LOC115913773
location: join(917697..917765,920611..920716,923871..923978,924734..924843,925311..925408,926244..926376,926986..927139,927649..927709,927990..928056,928161..928252,928522..928651,928878..928919,929093..929185)
location: region:917697-929185:1
so has part: feature:917697-917765:1:exon
so has part: feature:920611-920716:1:exon
so has part: feature:923871-923978:1:exon
so has part: feature:924734-924843:1:exon
so has part: feature:925311-925408:1:exon
so has part: feature:926244-926376:1:exon
so has part: feature:926986-927139:1:exon
so has part: feature:927649-927709:1:exon
so has part: feature:927990-928056:1:exon
so has part: feature:928161-928252:1:exon
so has part: feature:928522-928651:1:exon
so has part: feature:928878-928919:1:exon
so has part: feature:929093-929185:1:exon

XP_030821859.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:917697-917765:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:920611-920716:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:923871-923978:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:924734-924843:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:925311-925408:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:926244-926376:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:926986-927139:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:927649-927709:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:927990-928056:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:928161-928252:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:928522-928651:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:928878-928919:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:929093-929185:1:exon

SCN4A
type: Gene
subclass of: SO_0000704
RO_0002162: 87175
gene: SCN4A
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 946055..984971
location: region:946055-984971:1
so has part: feature:946055-984971:1:exon
subclass of: SO_0000010

115914008
type: Gene
SIO_000068: ncbigene

position:946055:1
position: 946055
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:984971:1
position: 984971
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:946055-984971:1:exon

SCN4A
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 87175
gene: SCN4A
product: sodium voltage-gated channel alpha subunit 4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 25 Proteins
transcript id: XM_030966347.1
SIO_010081: SCN4A
subclass of: SO_0000673
so part of: SCN4A
location: join(946055..946318,947615..947733,948673..948762,950160..950288,950367..950458,952375..952701,954289..954352,955478..955619,956413..956625,958759..958914,959107..959230,960321..960559,963052..963225,964114..964470,968558..968989,973683..973812,974500..974654,976967..977140,977798..977920,978145..978423,979800..979853,981278..981415,981957..982061,982746..983016,983782..984971)
location: region:946055-984971:1
so has part: feature:946055-946318:1:exon
so has part: feature:947615-947733:1:exon
so has part: feature:948673-948762:1:exon
so has part: feature:950160-950288:1:exon
so has part: feature:950367-950458:1:exon
so has part: feature:952375-952701:1:exon
so has part: feature:954289-954352:1:exon
so has part: feature:955478-955619:1:exon
so has part: feature:956413-956625:1:exon
so has part: feature:958759-958914:1:exon
so has part: feature:959107-959230:1:exon
so has part: feature:960321-960559:1:exon
so has part: feature:963052-963225:1:exon
so has part: feature:964114-964470:1:exon
so has part: feature:968558-968989:1:exon
so has part: feature:973683-973812:1:exon
so has part: feature:974500-974654:1:exon
so has part: feature:976967-977140:1:exon
so has part: feature:977798-977920:1:exon
so has part: feature:978145-978423:1:exon
so has part: feature:979800-979853:1:exon
so has part: feature:981278-981415:1:exon
so has part: feature:981957-982061:1:exon
so has part: feature:982746-983016:1:exon
so has part: feature:983782-984971:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:946055-946318:1:exon

position:946318:1
position: 946318
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:947615-947733:1:exon

position:947615:1
position: 947615
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:947733:1
position: 947733
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:948673-948762:1:exon

position:948673:1
position: 948673
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:948762:1
position: 948762
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:950160-950288:1:exon

position:950160:1
position: 950160
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:950288:1
position: 950288
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:950367-950458:1:exon

position:950367:1
position: 950367
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:950458:1
position: 950458
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:952375-952701:1:exon

position:952375:1
position: 952375
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:952701:1
position: 952701
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:954289-954352:1:exon

position:954289:1
position: 954289
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:954352:1
position: 954352
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:955478-955619:1:exon

position:955478:1
position: 955478
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:955619:1
position: 955619
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:956413-956625:1:exon

position:956413:1
position: 956413
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:956625:1
position: 956625
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:958759-958914:1:exon

position:958759:1
position: 958759
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:958914:1
position: 958914
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:959107-959230:1:exon

position:959107:1
position: 959107
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:959230:1
position: 959230
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:960321-960559:1:exon

position:960321:1
position: 960321
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:960559:1
position: 960559
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:963052-963225:1:exon

position:963052:1
position: 963052
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:963225:1
position: 963225
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:964114-964470:1:exon

position:964114:1
position: 964114
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:964470:1
position: 964470
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:968558-968989:1:exon

position:968558:1
position: 968558
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:968989:1
position: 968989
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:973683-973812:1:exon

position:973683:1
position: 973683
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:973812:1
position: 973812
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:974500-974654:1:exon

position:974500:1
position: 974500
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:974654:1
position: 974654
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:976967-977140:1:exon

position:976967:1
position: 976967
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:977140:1
position: 977140
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:977798-977920:1:exon

position:977798:1
position: 977798
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:977920:1
position: 977920
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:978145-978423:1:exon

position:978145:1
position: 978145
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:978423:1
position: 978423
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:979800-979853:1:exon

position:979800:1
position: 979800
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:979853:1
position: 979853
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 22
SIO_000628: feature:981278-981415:1:exon

position:981278:1
position: 981278
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:981415:1
position: 981415
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 23
SIO_000628: feature:981957-982061:1:exon

position:981957:1
position: 981957
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:982061:1
position: 982061
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 24
SIO_000628: feature:982746-983016:1:exon

position:982746:1
position: 982746
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:983016:1
position: 983016
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 25
SIO_000628: feature:983782-984971:1:exon

position:983782:1
position: 983782
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

SCN4A
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 87175
gene: SCN4A
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: sodium channel protein type 4 subunit alpha
translation: MAGLPHIPGPENLRPFTPASLAAIEQRMAEAEALRIKRQQVEMPEEEELKPSSDLEAGKNLPLIYGDPPLELIGTPLEDLDPFYKDKKTFIVLNKGKSIFRFSATPALYMLGPFNPIRRGAIKVLIHSLFSMFIMITILTNCVFMTMSNPPAWSKNVEYAFTGIYTFESLIKILSRGFCIDDFTFLRDPWNWLDFMVISMAYITEFVDLGNISALRTFRVLRALKTITVIPGLKTIVGALIQSVKKLSDVMILTVFCLSVFALIGLQLFMGNLRQKCVRWPPPNSTFLQDLGLDNDTLANSTFYDFMDDFTGNFTGNFTGNFTGNFTGSTFDFEAYISDEANYYFLEGALDALLCGNSSDAGKCPEGYTCMKAGRNPNYGYTSYDTFSWAFLALFRLMTQDFWENLFQLTLRAAGKTYMIFFVVVIFLGSFYLINLILAVVAMAYAEQNDATMLEEQQKEEEFQQLMEQLKKQQEEQERLLQERSSSSNSLPSSVAGKGHDSDLNSDQDKAKDCNGQVVPKITLQRSDTVVDFNSTHEPEKPDLNHLTVGNQDGPGLEKRVGSAISVISNAVEELEEAHQKCPPWWYKFAHTFLVWNCCRPWVKLKEFVKLVVMDPFVDLGITICIVLNTLFMAMEHYPMTEEFENVLSVGNLVFTGIFTAEMVLKLIALDPYEYFQQGWNIFDSFIVTLSLVELGLANVQGLSVLRSFRLLRVFKLAKSWPTLNMLIKIIGNSVGALGNLTLVLAIIVFIFAVVGMQLFGKSYIECVCKISVDCTLPRWHMHDFFHSFLIVFRILCGEWIETMWDCMEVAGQTMCLIVFMMVMVIGNLVVLNLFLALLLSSFSADSLAASDDDGELNNLQIAIGRITRGIALGKAALLALLRRLCKGKKVAPEEEQEPGKRDNPALNHVDTALEPKLGYLDGITGKEHIFMDELEHMNFINNPSLTVQVPIASEESDLYEETSTQSDTEDTSKNPLSSDNASSVCSTVDYKPPAPEEEEVAEEAEESNEPEECFTEGCVKRFPCLYVDITSEKGRIWWNLRKTCFRIVEHDWFETFIVFMILLSSGALAFEDIYIEQRKVIRTILEYADKVFSYIFVIEMLLKWVAYGFKVYFTNAWCWLDFLIVDVSLVSLTANWLGYSELGAIKSLRTLRALRPLRALSRFEGMRVVVNALVGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGKYYRCVNTTTGELFEIDVVNNKSDCMALLHTNEVRWVNVKVNFDNVGLGYLSLLQVATFKGWMDIMYAAVDSREIEEQPKYEINLYMYIYFVIFIIFGAFFTLNLFIGVIIDNFNQQKKKFGGKDIFMTEEQKKYYNAMKKLGSKKPQKPIPRPANKIQGKVFDFVTKQVFDITIMILICLNMVTMMVETDDQSELKTSVLYKINLVFIVIFTGECVLKMFALRHYFFTVGWNIFDFVVVILSILGIVLSDIIEKYFVSPTLFRVIRLARIGRVLRLIRGAKGIRTLLFALMMSLPALFNIGLLLFLVMFIYSIFGMSNFAYVKKESGIDDIFNFETFGNSIICLFQITTSAGWDGLLNPILNSGPPDCDPELENPGSSVKGDCGNPAIGIFFFCSYIIISFLIVVNMYIAIILENFSVATEESSEPLCEDDFEMFYETWEKFDPDATQFIAYSTLSDFVDTLQEPLRVPKPNKIKLITMDLPMVAGDKIHCLDILFALTKEVLGDSGEMDALKATMEEKFMAANPSKVSYEPITTTLKRKHEEVCATRIQRAFRRYLLRRSVKQASYMYRHSQDALGEDAPEKEGLIATKMQEIYGNSGTDVETAPALGLKPIPSSETPQDAPEEAQVWRKEHVVKESLV
SIO_010081: SCN4A
subclass of: SO_0000673
so part of: SCN4A
location: join(946055..946318,947615..947733,948673..948762,950160..950288,950367..950458,952375..952701,954289..954352,955478..955619,956413..956625,958759..958914,959107..959230,960321..960559,963052..963225,964114..964470,968558..968989,973683..973812,974500..974654,976967..977140,977798..977920,978145..978423,979800..979853,981278..981415,981957..982061,982746..983016,983782..984971)
location: region:946055-984971:1
so has part: feature:946055-946318:1:exon
so has part: feature:947615-947733:1:exon
so has part: feature:948673-948762:1:exon
so has part: feature:950160-950288:1:exon
so has part: feature:950367-950458:1:exon
so has part: feature:952375-952701:1:exon
so has part: feature:954289-954352:1:exon
so has part: feature:955478-955619:1:exon
so has part: feature:956413-956625:1:exon
so has part: feature:958759-958914:1:exon
so has part: feature:959107-959230:1:exon
so has part: feature:960321-960559:1:exon
so has part: feature:963052-963225:1:exon
so has part: feature:964114-964470:1:exon
so has part: feature:968558-968989:1:exon
so has part: feature:973683-973812:1:exon
so has part: feature:974500-974654:1:exon
so has part: feature:976967-977140:1:exon
so has part: feature:977798-977920:1:exon
so has part: feature:978145-978423:1:exon
so has part: feature:979800-979853:1:exon
so has part: feature:981278-981415:1:exon
so has part: feature:981957-982061:1:exon
so has part: feature:982746-983016:1:exon
so has part: feature:983782-984971:1:exon

XP_030822207.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:946055-946318:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:947615-947733:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:948673-948762:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:950160-950288:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:950367-950458:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:952375-952701:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:954289-954352:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:955478-955619:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:956413-956625:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:958759-958914:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:959107-959230:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:960321-960559:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:963052-963225:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:964114-964470:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:968558-968989:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:973683-973812:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:974500-974654:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:976967-977140:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:977798-977920:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:978145-978423:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:979800-979853:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:981278-981415:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:981957-982061:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:982746-983016:1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:983782-984971:1:exon

CD79B
type: Gene
subclass of: SO_0000704
RO_0002162: 87175
gene: CD79B
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 989399..995325
location: region:989399-995325:1
so has part: feature:989399-995325:1:exon
subclass of: SO_0000010

115914009
type: Gene
SIO_000068: ncbigene

position:989399:1
position: 989399
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:995325:1
position: 995325
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:989399-995325:1:exon

CD79B
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 87175
gene: CD79B
product: CD79b molecule
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 22% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_030966348.1
SIO_010081: CD79B
subclass of: SO_0000673
so part of: CD79B
location: join(989399..989492,991302..991343,993023..993334,994452..994570,994844..994885,995227..995325)
location: region:989399-995325:1
so has part: feature:989399-989492:1:exon
so has part: feature:991302-991343:1:exon
so has part: feature:993023-993334:1:exon
so has part: feature:994452-994570:1:exon
so has part: feature:994844-994885:1:exon
so has part: feature:995227-995325:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:989399-989492:1:exon

position:989492:1
position: 989492
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:991302-991343:1:exon

position:991302:1
position: 991302
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:991343:1
position: 991343
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:993023-993334:1:exon

position:993023:1
position: 993023
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:993334:1
position: 993334
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:994452-994570:1:exon

position:994452:1
position: 994452
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:994570:1
position: 994570
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:994844-994885:1:exon

position:994844:1
position: 994844
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:994885:1
position: 994885
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:995227-995325:1:exon

position:995227:1
position: 995227
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

CD79B
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 87175
gene: CD79B
note: The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: substituted 1 base at 1 genomic stop codon; Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
transl except: (pos:989420..989422,aa:OTHER)
product: LOW QUALITY PROTEIN: B-cell antigen receptor complex-associated protein beta chain
translation: MFSCPGHXSMAALGTRLWLLPVTLWLLPLLTGGTPAEKNSTGNSTDGPMCPSVHQNVRYVAVKKNMPIYFMCYSMEPQVMQWYKTAEDREDLSVLDQNTTRYHVERTNTSINLTLLRTSSEDNGIYVCDRKGLVQKEKLHSCGTELRVMGTSSIKQFQNRNTLKDAIIIIQSILLVIFISIPILLFLDKGEDKKSPEEDHTYEGLEVEQMATYEDITPFRDVKAKWTVGEHPGEE
SIO_010081: CD79B
subclass of: SO_0000673
so part of: CD79B
location: join(989399..989492,991302..991343,993023..993334,994452..994570,994844..994885,995227..995325)
location: region:989399-995325:1
so has part: feature:989399-989492:1:exon
so has part: feature:991302-991343:1:exon
so has part: feature:993023-993334:1:exon
so has part: feature:994452-994570:1:exon
so has part: feature:994844-994885:1:exon
so has part: feature:995227-995325:1:exon

XP_030822208.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:989399-989492:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:991302-991343:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:993023-993334:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:994452-994570:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:994844-994885:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:995227-995325:1:exon

LOC115914058
type: Gene
subclass of: SO_0000704
RO_0002162: 87175
gene: LOC115914058
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1000334..1004605
location: region:1000334-1004605:1
so has part: feature:1000334-1004605:1:exon
subclass of: SO_0000010

115914058
type: Gene
SIO_000068: ncbigene

position:1000334:1
position: 1000334
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1004605:1
position: 1004605
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1000334-1004605:1:exon

LOC115914058
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 87175
gene: LOC115914058
product: somatotropin
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 mRNAs, 3 ESTs, 29 Proteins
transcript id: XM_030966408.1
SIO_010081: LOC115914058
subclass of: SO_0000673
so part of: LOC115914058
location: join(1000334..1000379,1001262..1001425,1002171..1002287,1002649..1002810,1004355..1004605)
location: region:1000334-1004605:1
so has part: feature:1000334-1000379:1:exon
so has part: feature:1001262-1001425:1:exon
so has part: feature:1002171-1002287:1:exon
so has part: feature:1002649-1002810:1:exon
so has part: feature:1004355-1004605:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1000334-1000379:1:exon

position:1000379:1
position: 1000379
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1001262-1001425:1:exon

position:1001262:1
position: 1001262
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1001425:1
position: 1001425
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1002171-1002287:1:exon

position:1002171:1
position: 1002171
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1002287:1
position: 1002287
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1002649-1002810:1:exon

position:1002649:1
position: 1002649
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1002810:1
position: 1002810
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1004355-1004605:1:exon

position:1004355:1
position: 1004355
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC115914058
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 87175
gene: LOC115914058
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: somatotropin
translation: MAPGSWLSPLAIAVIALGLQWPQAAATFPAMPLSSLFANAVLRAQHLHLLAAETYKEFERSYIPEDQRHTNKNSQVAYCYSETIPAPTGKEDAQQKSDMELLRFSLVLIQSWLTPVQYLSKVFTNNLVFGTSDRVYEKLKDLEEGIQALMRELEERSPRGLQVLKPTYEKFELHLRGEDALVKNYGLLSCFKKDLHKVETYLKVMRCRRYGEGNCAL
SIO_010081: LOC115914058
subclass of: SO_0000673
so part of: LOC115914058
location: join(1000370..1000379,1001262..1001425,1002171..1002287,1002649..1002810,1004355..1004555)
location: region:1000370-1004555:1
so has part: feature:1000370-1000379:1:exon
so has part: feature:1001262-1001425:1:exon
so has part: feature:1002171-1002287:1:exon
so has part: feature:1002649-1002810:1:exon
so has part: feature:1004355-1004555:1:exon

XP_030822268.1
type: Protein
SIO_000068: ncbiprotein

position:1000370:1
position: 1000370
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1004555:1
position: 1004555
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1000370-1000379:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1001262-1001425:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1002171-1002287:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1002649-1002810:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1004355-1004555:1:exon

PLEKHM1
type: Gene
subclass of: SO_0000704
RO_0002162: 87175
gene: PLEKHM1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1115813..1137504
location: region:1115813-1137504:1
so has part: feature:1115813-1137504:1:exon
subclass of: SO_0000010

115914035
type: Gene
SIO_000068: ncbigene

position:1115813:1
position: 1115813
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1137504:1
position: 1137504
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1115813-1137504:1:exon

PLEKHM1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 87175
gene: PLEKHM1
product: pleckstrin homology and RUN domain containing M1
exception: unclassified transcription discrepancy
note: The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: inserted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_030966382.1
SIO_010081: PLEKHM1
subclass of: SO_0000673
so part of: PLEKHM1
location: join(1115813..1115868,1116604..1117022,1117540..1117697,1120933..1121014,1122563..1122810,1124141..1124770,1125949..1126272,1128469..1128703,1129113..1130015,1131547..1131692,1131826..1132019,1132461..1132524,1132918..1133075,1136585..1137504)
location: region:1115813-1137504:1
so has part: feature:1115813-1115868:1:exon
so has part: feature:1116604-1117022:1:exon
so has part: feature:1117540-1117697:1:exon
so has part: feature:1120933-1121014:1:exon
so has part: feature:1122563-1122810:1:exon
so has part: feature:1124141-1124770:1:exon
so has part: feature:1125949-1126272:1:exon
so has part: feature:1128469-1128703:1:exon
so has part: feature:1129113-1130015:1:exon
so has part: feature:1131547-1131692:1:exon
so has part: feature:1131826-1132019:1:exon
so has part: feature:1132461-1132524:1:exon
so has part: feature:1132918-1133075:1:exon
so has part: feature:1136585-1137504:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1115813-1115868:1:exon

position:1115868:1
position: 1115868
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1116604-1117022:1:exon

position:1116604:1
position: 1116604
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1117022:1
position: 1117022
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1117540-1117697:1:exon

position:1117540:1
position: 1117540
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1117697:1
position: 1117697
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1120933-1121014:1:exon

position:1120933:1
position: 1120933
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1121014:1
position: 1121014
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1122563-1122810:1:exon

position:1122563:1
position: 1122563
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1122810:1
position: 1122810
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1124141-1124770:1:exon

position:1124141:1
position: 1124141
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1124770:1
position: 1124770
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1125949-1126272:1:exon

position:1125949:1
position: 1125949
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1126272:1
position: 1126272
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1128469-1128703:1:exon

position:1128469:1
position: 1128469
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1128703:1
position: 1128703
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:1129113-1130015:1:exon

position:1129113:1
position: 1129113
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1130015:1
position: 1130015
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:1131547-1131692:1:exon

position:1131547:1
position: 1131547
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1131692:1
position: 1131692
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:1131826-1132019:1:exon

position:1131826:1
position: 1131826
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1132019:1
position: 1132019
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:1132461-1132524:1:exon

position:1132461:1
position: 1132461
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1132524:1
position: 1132524
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:1132918-1133075:1:exon

position:1132918:1
position: 1132918
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1133075:1
position: 1133075
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:1136585-1137504:1:exon

position:1136585:1
position: 1136585
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

PLEKHM1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 87175
gene: PLEKHM1
exception: unclassified translation discrepancy
note: The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: inserted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: LOW QUALITY PROTEIN: pleckstrin homology domain-containing family M member 1
translation: MHSSHPEDPKEAIQLIKKQLVTAIKALQKQYVSSDTVVTSDDGNANTLCSALEAVFVHGLKAKHIKAESGGKGKKSGGRGPLPQPVFWGLLKSITHRNIVSELEQLMFINTDVGRCRAWLRLALNDGLMECYLKLLLRDRARLHEYYQTPAVLLDAEECEFLLCYLQGLSSLTFELSYKSAVLNEWTITPLSLSGLCPVSELLEPLTSSEPHRKASLGSISQSSGSDEIEIQAPVLPISKASSKIKLTSSSLSLNTTSSSQLSSSLGSDSLPAAPCARSPERAEEPLSCDSDLGTATAEDLDRSLQEVLSEFSKARPSPDAPEGRLLPSVLGCSPQPPPGPPAPSNRAQQEPPPAGTPLLGQQPPGTGTXDGSSTSGAPAPREGLGRATSSGSEGSQAVRSPTAQQLLSPLPGCPKSWISEDDFYRPPPGESSRSIADTNGFGPEVDSEGPAPGLISALDLERLSVPSLDTGKPKMSPEREQKGFSVVHRRQMGLSNPFRGLLKLGSLERRGAMGIWKEFSCELSPLELRLFLDHEERICVETFSLLRCESLALSQDGRFELVFLGKKLFLRAPSQDEAEDWLDRIREALHKCRPQLEEEDWETLECSEDGGEAQLIQGDSSALQQSDVPGSSLDWSAAPEAELDAIKEAVLYMDVDKTWVPFIFSLSLETLKCFKIRNNDKILSNSYGIETIQDILPDTSLGGPSFFKVITSKAVLKLQAESAEEAASWRELVREVLMSYLEGAEEALTLGGSLDGHSQVVLKNIVKENGFLLQYLVAIPMEKGLDAQSFICAGCSRQIGFSFARPKLCAFSGLYYCDSCHRDEESIIPSRLIHNWDLTKRGVCKQALKFLTQIRNQPLIDLRLVNESLYEHVERMGRILRSREQLKLLGDYLIMCRSGALKELSKRLDHRHYLLECPHKYSVADLRQIAEGAFESFLQSLLQFASHHVYSCDLCTQRGFICQICNSSDIIFPFEFDTTTRCSECKTVFHRDCHARAPACPRCERRQRYQRQLEASTEPSPEPGTYLDTALGAGMAGGTEQSPPA
SIO_010081: PLEKHM1
subclass of: SO_0000673
so part of: PLEKHM1
location: join(1120973..1121014,1122563..1122810,1124141..1124770,1125949..1126272,1128469..1128703,1129113..1130015,1131547..1131692,1131826..1132019,1132461..1132524,1132918..1133075,1136585..1136780)
location: region:1120973-1136780:1
so has part: feature:1120973-1121014:1:exon
so has part: feature:1122563-1122810:1:exon
so has part: feature:1124141-1124770:1:exon
so has part: feature:1125949-1126272:1:exon
so has part: feature:1128469-1128703:1:exon
so has part: feature:1129113-1130015:1:exon
so has part: feature:1131547-1131692:1:exon
so has part: feature:1131826-1132019:1:exon
so has part: feature:1132461-1132524:1:exon
so has part: feature:1132918-1133075:1:exon
so has part: feature:1136585-1136780:1:exon

XP_030822242.1
type: Protein
SIO_000068: ncbiprotein

position:1120973:1
position: 1120973
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1136780:1
position: 1136780
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1120973-1121014:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1122563-1122810:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1124141-1124770:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1125949-1126272:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1128469-1128703:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1129113-1130015:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1131547-1131692:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1131826-1132019:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1132461-1132524:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1132918-1133075:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1136585-1136780:1:exon

ARHGAP27
type: Gene
subclass of: SO_0000704
RO_0002162: 87175
gene: ARHGAP27
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1137735..1150090
location: region:1137735-1150090:1
so has part: feature:1137735-1150090:1:exon
subclass of: SO_0000010

115914034
type: Gene
SIO_000068: ncbigene

position:1137735:1
position: 1137735
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1150090:1
position: 1150090
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1137735-1150090:1:exon

ARHGAP27
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 87175
gene: ARHGAP27
product: Rho GTPase activating protein 27
exception: unclassified transcription discrepancy
note: The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: inserted 4 bases in 2 codons; deleted 2 bases in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 11 Proteins, and 91% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_030966381.1
SIO_010081: ARHGAP27
subclass of: SO_0000673
so part of: ARHGAP27
location: join(1137735..1138076,1138335..1139109,1142502..1142927,1143905..1144120,1144451..1144561,1144654..1144721,1144815..1144902,1146432..1146536,1146920..1147018,1147092..1147182,1147296..1147415,1148342..1148440,1148726..1148803,1148937..1149071,1149460..1149565,1149676..1150090)
location: region:1137735-1150090:1
so has part: feature:1137735-1138076:1:exon
so has part: feature:1138335-1139109:1:exon
so has part: feature:1142502-1142927:1:exon
so has part: feature:1143905-1144120:1:exon
so has part: feature:1144451-1144561:1:exon
so has part: feature:1144654-1144721:1:exon
so has part: feature:1144815-1144902:1:exon
so has part: feature:1146432-1146536:1:exon
so has part: feature:1146920-1147018:1:exon
so has part: feature:1147092-1147182:1:exon
so has part: feature:1147296-1147415:1:exon
so has part: feature:1148342-1148440:1:exon
so has part: feature:1148726-1148803:1:exon
so has part: feature:1148937-1149071:1:exon
so has part: feature:1149460-1149565:1:exon
so has part: feature:1149676-1150090:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1137735-1138076:1:exon

position:1138076:1
position: 1138076
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1138335-1139109:1:exon

position:1138335:1
position: 1138335
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1139109:1
position: 1139109
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1142502-1142927:1:exon

position:1142502:1
position: 1142502
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1142927:1
position: 1142927
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1143905-1144120:1:exon

position:1143905:1
position: 1143905
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1144120:1
position: 1144120
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1144451-1144561:1:exon

position:1144451:1
position: 1144451
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1144561:1
position: 1144561
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1144654-1144721:1:exon

position:1144654:1
position: 1144654
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1144721:1
position: 1144721
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1144815-1144902:1:exon

position:1144815:1
position: 1144815
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1144902:1
position: 1144902
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1146432-1146536:1:exon

position:1146432:1
position: 1146432
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1146536:1
position: 1146536
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:1146920-1147018:1:exon

position:1146920:1
position: 1146920
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1147018:1
position: 1147018
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:1147092-1147182:1:exon

position:1147092:1
position: 1147092
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1147182:1
position: 1147182
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:1147296-1147415:1:exon

position:1147296:1
position: 1147296
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1147415:1
position: 1147415
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:1148342-1148440:1:exon

position:1148342:1
position: 1148342
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1148440:1
position: 1148440
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:1148726-1148803:1:exon

position:1148726:1
position: 1148726
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1148803:1
position: 1148803
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:1148937-1149071:1:exon

position:1148937:1
position: 1148937
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1149071:1
position: 1149071
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:1149460-1149565:1:exon

position:1149460:1
position: 1149460
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1149565:1
position: 1149565
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:1149676-1150090:1:exon

position:1149676:1
position: 1149676
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

ARHGAP27
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 87175
gene: ARHGAP27
exception: unclassified translation discrepancy
note: The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: inserted 4 bases in 2 codons; deleted 2 bases in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: LOW QUALITY PROTEIN: rho GTPase-activating protein 27
translation: MGSPSHCPGRPCQIRQQRRSXRSSGAGPFLRQEPPEEPFPRRAAAGPLRHRPVPRRGDRTRPAPRAAAGAGHPPAAXSPAPSLVEAAAETGRVGTGPARARAAPRARPRPSAGRRRRRGEAMEAAEPAEEALVLVEYGFEYRAKDGTLVSIKPNERYVLLKRTNPHWWHVRRSGDARPFYIPAQYVKELPPIAAPAPLDPPPSGHAATEPAVIVPQPPPAYEYRFIGAAEPGEPAGGCPVPRRDSMLQRDSVLQRDSVLQRDSVPRRDSVPRNVSVPRRDSVPRRDSPPSLSSFRVLPGLTPHPAEPVRPSHSLDDLARVTPAPRSATAAAGARGDPPGHARPLGKSRSETLCASGKDRDVAGRWPGSGPAAQARKESGETPDPIYLNIQELRAEAAASSAPEEPSGSVSDWETHTDTDSGHLFYYNPVTGETTWDCPFGQAADGVSPGASPASSLAHSPELPEWEQHVDQGSGQIFFYNSVTGETSWDPPSAGDTGSPRERLPGGTRYGPMEQRPPTPETDYPDLSPDELECYPEEDYSPVGSYDQGASLCLSPRHPEELGSPPGWYGHGHPEGFVFYPEHFAPDTVPSGGRHERASSGSSQDSGLSAWHGAVSPAPGSREEKFKSLEKAGVLNRTKTVDRGKRLRKNWSSSWTVLEGGILTFFKDSKHSAASALRHPSTLTTPEHTVKLRGATLTWAGRDKSSKKNVLELRTREGSEFLIQHDSEQIITAWHKAIADSIGRRGSDISGEEEAEIRAEFGSREKLGGGEERRAAAGQATGSAESDTNRVRNKLRKFLQRRPTLQSLRERGYIKDQVFGCSLLALCERERGTVPRFILQCICTVERRGLDIDGLYRVSGNLATIQKLRYKVEHDEQLDLDDGRWEDIHVVTGALKLFLRELPEPLVPFSHFDKFIAAIKIQDLSLRGHCIRELVLSLPPAHHDTMKVLFRHLCRVVEHKEENRMSVQSIAIVFGPTLLRPASEESNMAMHMVFQNQVVEHILNHYGYIFPDG
SIO_010081: ARHGAP27
subclass of: SO_0000673
so part of: ARHGAP27
location: join(1137735..1138076,1138335..1139109,1142502..1142927,1143905..1144120,1144451..1144561,1144654..1144721,1144815..1144902,1146432..1146536,1146920..1147018,1147092..1147182,1147296..1147415,1148342..1148440,1148726..1148803,1148937..1149071,1149460..1149565,1149676..1149853)
location: region:1137735-1149853:1
so has part: feature:1137735-1138076:1:exon
so has part: feature:1138335-1139109:1:exon
so has part: feature:1142502-1142927:1:exon
so has part: feature:1143905-1144120:1:exon
so has part: feature:1144451-1144561:1:exon
so has part: feature:1144654-1144721:1:exon
so has part: feature:1144815-1144902:1:exon
so has part: feature:1146432-1146536:1:exon
so has part: feature:1146920-1147018:1:exon
so has part: feature:1147092-1147182:1:exon
so has part: feature:1147296-1147415:1:exon
so has part: feature:1148342-1148440:1:exon
so has part: feature:1148726-1148803:1:exon
so has part: feature:1148937-1149071:1:exon
so has part: feature:1149460-1149565:1:exon
so has part: feature:1149676-1149853:1:exon

XP_030822241.1
type: Protein
SIO_000068: ncbiprotein

position:1149853:1
position: 1149853
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1137735-1138076:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1138335-1139109:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1142502-1142927:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1143905-1144120:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1144451-1144561:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1144654-1144721:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1144815-1144902:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1146432-1146536:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1146920-1147018:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1147092-1147182:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1147296-1147415:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1148342-1148440:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1148726-1148803:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1148937-1149071:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1149460-1149565:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1149676-1149853:1:exon

TMEM98
type: Gene
subclass of: SO_0000704
RO_0002162: 87175
gene: TMEM98
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1151352..1156055
location: region:1151352-1156055:1
so has part: feature:1151352-1156055:1:exon
subclass of: SO_0000010

115914042
type: Gene
SIO_000068: ncbigene

position:1151352:1
position: 1151352
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1156055:1
position: 1156055
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1151352-1156055:1:exon

TMEM98
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 87175
gene: TMEM98
product: transmembrane protein 98
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 12 Proteins, and 96% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_030966387.1
SIO_010081: TMEM98
subclass of: SO_0000673
so part of: TMEM98
location: join(1151352..1151435,1153230..1153416,1153932..1154063,1154308..1154341,1154663..1154778,1155225..1155284,1155719,1155779..1156055)
location: region:1151352-1156055:1
so has part: feature:1151352-1151435:1:exon
so has part: feature:1153230-1153416:1:exon
so has part: feature:1153932-1154063:1:exon
so has part: feature:1154308-1154341:1:exon
so has part: feature:1154663-1154778:1:exon
so has part: feature:1155225-1155284:1:exon
so has part: feature:1155719-1155719:1:exon
so has part: feature:1155779-1156055:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1151352-1151435:1:exon

position:1151435:1
position: 1151435
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1153230-1153416:1:exon

position:1153230:1
position: 1153230
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1153416:1
position: 1153416
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1153932-1154063:1:exon

position:1153932:1
position: 1153932
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1154063:1
position: 1154063
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1154308-1154341:1:exon

position:1154308:1
position: 1154308
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1154341:1
position: 1154341
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1154663-1154778:1:exon

position:1154663:1
position: 1154663
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1154778:1
position: 1154778
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1155225-1155284:1:exon

position:1155225:1
position: 1155225
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1155284:1
position: 1155284
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1155719-1155719:1:exon

position:1155719:1
position: 1155719
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1155779-1156055:1:exon

position:1155779:1
position: 1155779
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

TMEM98
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 87175
gene: TMEM98
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: transmembrane protein 98
translation: METVVIVAIGVLATIFLASFVALVVVCRQRYCHPKDLRHHYDTKPIVDLMGTTETPSEPSELELDDVVITNPHIEAILENEDWVEDASGLVSHCIAILKICHTLTEKLVAMTMGSGARVKSPASLGDIIVVAKRISPRVDDVVRSMYPPLDPKLLDARGRALLLSVSHLVLVTRSACRQPAARHWVERSLAAAEEHMAVLRQAAMATEPERPPAPGEPPRQEQSAI
SIO_010081: TMEM98
subclass of: SO_0000673
so part of: TMEM98
location: join(1153286..1153416,1153932..1154063,1154308..1154341,1154663..1154778,1155225..1155284,1155719,1155779..1155985)
location: region:1153286-1155985:1
so has part: feature:1153286-1153416:1:exon
so has part: feature:1153932-1154063:1:exon
so has part: feature:1154308-1154341:1:exon
so has part: feature:1154663-1154778:1:exon
so has part: feature:1155225-1155284:1:exon
so has part: feature:1155719-1155719:1:exon
so has part: feature:1155779-1155985:1:exon

XP_030822247.1
type: Protein
SIO_000068: ncbiprotein

position:1153286:1
position: 1153286
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1155985:1
position: 1155985
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1153286-1153416:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1153932-1154063:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1154308-1154341:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1154663-1154778:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1155225-1155284:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1155719-1155719:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1155779-1155985:1:exon

GRN
type: Gene
subclass of: SO_0000704
RO_0002162: 87175
gene: GRN
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1158437..1164453
location: region:1158437-1164453:1
so has part: feature:1158437-1164453:1:exon
subclass of: SO_0000010

115914100
type: Gene
SIO_000068: ncbigene

position:1158437:1
position: 1158437
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1164453:1
position: 1164453
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1158437-1164453:1:exon

GRN
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 87175
gene: GRN
product: granulin precursor, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XM_030966447.1
SIO_010081: GRN
subclass of: SO_0000673
so part of: GRN
location: join(1158437..1158487,1159748..1159851,1159921..1159992,1160090..1160174,1160250..1160353,1160436..1160583,1160677..1160783,1161288..1161402,1161484..1161581,1162368..1162610,1163342..1163584,1163920..1164204,1164273..1164453)
location: region:1158437-1164453:1
so has part: feature:1158437-1158487:1:exon
so has part: feature:1159748-1159851:1:exon
so has part: feature:1159921-1159992:1:exon
so has part: feature:1160090-1160174:1:exon
so has part: feature:1160250-1160353:1:exon
so has part: feature:1160436-1160583:1:exon
so has part: feature:1160677-1160783:1:exon
so has part: feature:1161288-1161402:1:exon
so has part: feature:1161484-1161581:1:exon
so has part: feature:1162368-1162610:1:exon
so has part: feature:1163342-1163584:1:exon
so has part: feature:1163920-1164204:1:exon
so has part: feature:1164273-1164453:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1158437-1158487:1:exon

position:1158487:1
position: 1158487
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1159748-1159851:1:exon

position:1159748:1
position: 1159748
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1159851:1
position: 1159851
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1159921-1159992:1:exon

position:1159921:1
position: 1159921
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1159992:1
position: 1159992
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1160090-1160174:1:exon

position:1160090:1
position: 1160090
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1160174:1
position: 1160174
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1160250-1160353:1:exon

position:1160250:1
position: 1160250
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1160353:1
position: 1160353
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1160436-1160583:1:exon

position:1160436:1
position: 1160436
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1160583:1
position: 1160583
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1160677-1160783:1:exon

position:1160677:1
position: 1160677
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1160783:1
position: 1160783
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1161288-1161402:1:exon

position:1161288:1
position: 1161288
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1161402:1
position: 1161402
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:1161484-1161581:1:exon

position:1161484:1
position: 1161484
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1161581:1
position: 1161581
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:1162368-1162610:1:exon

position:1162368:1
position: 1162368
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1162610:1
position: 1162610
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:1163342-1163584:1:exon

position:1163342:1
position: 1163342
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1163584:1
position: 1163584
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:1163920-1164204:1:exon

position:1163920:1
position: 1163920
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1164204:1
position: 1164204
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:1164273-1164453:1:exon

position:1164273:1
position: 1164273
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

GRN
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 87175
gene: GRN
product: granulin precursor, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_030966448.1
SIO_010081: GRN
subclass of: SO_0000673
so part of: GRN
location: join(1158493..1158533,1159748..1159851,1159921..1159992,1160090..1160174,1160250..1160353,1160436..1160583,1160677..1160783,1161288..1161402,1161484..1161581,1162368..1162610,1163342..1163584,1163920..1164204,1164273..1164453)
location: region:1158493-1164453:1
so has part: feature:1158493-1158533:1:exon
so has part: feature:1159748-1159851:1:exon
so has part: feature:1159921-1159992:1:exon
so has part: feature:1160090-1160174:1:exon
so has part: feature:1160250-1160353:1:exon
so has part: feature:1160436-1160583:1:exon
so has part: feature:1160677-1160783:1:exon
so has part: feature:1161288-1161402:1:exon
so has part: feature:1161484-1161581:1:exon
so has part: feature:1162368-1162610:1:exon
so has part: feature:1163342-1163584:1:exon
so has part: feature:1163920-1164204:1:exon
so has part: feature:1164273-1164453:1:exon

position:1158493:1
position: 1158493
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1158493-1158533:1:exon

position:1158533:1
position: 1158533
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1159748-1159851:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1159921-1159992:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1160090-1160174:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1160250-1160353:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1160436-1160583:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1160677-1160783:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1161288-1161402:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1161484-1161581:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1162368-1162610:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1163342-1163584:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1163920-1164204:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1164273-1164453:1:exon

GRN
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 87175
gene: GRN
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: progranulin
translation: MRTLLLLWVALAGAGAQLPCPHGGPCPVTPALPARSAVGCQDSSSCPASCQLPESVPCAGGHRCCPRGSHCSADGESCVTDLAPRAVPCPDGQSECPDDATCCVTSSGAWGCCPMPQASCCADKVHCCPHATVCDLSRGRCVSPAGDTDVPLGTAFPAWKRHPPAPVALRQVLCPDGRSACPDGATCCQLSPGQYGCCPLQNAVCCSDGQHCCPQGTTCDLIHSTCTSLGASAPLPALPTAGDIKCDERTSCPDGNTCCRLSSGAWGCCPLEKAVCCPDHVHCCPQGYTCDPEGGSCLQRGGTRRPWVRKTPALPRGGQVTSGNVICDETTSCPDGTTCCRMSLGTWGCCPFSQAVCCPDLVHCCPQGYTCDPEGGTCLQGGGTRRPWVRKTPALPHGGQVTSGNVKCDETTSCPDGSTCCRLSLGTWGCCPLEQAVCCGDHKHCCPRGYTCNVATESCEKLLAPTPLLPTPSAPRPAPSVPRRAPPVPLRAAGTRPGGLVPCGATGSCHGGQRCCQARGGSWGCCPFAQGSCCSDGRHCCPAGSRCTGGGWGCSPQRWDLL
SIO_010081: GRN
subclass of: SO_0000673
so part of: GRN
location: join(1159762..1159851,1159921..1159992,1160090..1160174,1160250..1160353,1160436..1160583,1160677..1160783,1161288..1161402,1161484..1161581,1162368..1162610,1163342..1163584,1163920..1164204,1164273..1164371)
location: region:1159762-1164371:1
so has part: feature:1159762-1159851:1:exon
so has part: feature:1159921-1159992:1:exon
so has part: feature:1160090-1160174:1:exon
so has part: feature:1160250-1160353:1:exon
so has part: feature:1160436-1160583:1:exon
so has part: feature:1160677-1160783:1:exon
so has part: feature:1161288-1161402:1:exon
so has part: feature:1161484-1161581:1:exon
so has part: feature:1162368-1162610:1:exon
so has part: feature:1163342-1163584:1:exon
so has part: feature:1163920-1164204:1:exon
so has part: feature:1164273-1164371:1:exon

XP_030822307.1
type: Protein
SIO_000068: ncbiprotein

position:1159762:1
position: 1159762
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1164371:1
position: 1164371
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1159762-1159851:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1159921-1159992:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1160090-1160174:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1160250-1160353:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1160436-1160583:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1160677-1160783:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1161288-1161402:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1161484-1161581:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1162368-1162610:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1163342-1163584:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1163920-1164204:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1164273-1164371:1:exon

GRN
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 87175
gene: GRN
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: progranulin
translation: MRTLLLLWVALAGAGAQLPCPHGGPCPVTPALPARSAVGCQDSSSCPASCQLPESVPCAGGHRCCPRGSHCSADGESCVTDLAPRAVPCPDGQSECPDDATCCVTSSGAWGCCPMPQASCCADKVHCCPHATVCDLSRGRCVSPAGDTDVPLGTAFPAWKRHPPAPVALRQVLCPDGRSACPDGATCCQLSPGQYGCCPLQNAVCCSDGQHCCPQGTTCDLIHSTCTSLGASAPLPALPTAGDIKCDERTSCPDGNTCCRLSSGAWGCCPLEKAVCCPDHVHCCPQGYTCDPEGGSCLQRGGTRRPWVRKTPALPRGGQVTSGNVICDETTSCPDGTTCCRMSLGTWGCCPFSQAVCCPDLVHCCPQGYTCDPEGGTCLQGGGTRRPWVRKTPALPHGGQVTSGNVKCDETTSCPDGSTCCRLSLGTWGCCPLEQAVCCGDHKHCCPRGYTCNVATESCEKLLAPTPLLPTPSAPRPAPSVPRRAPPVPLRAAGTRPGGLVPCGATGSCHGGQRCCQARGGSWGCCPFAQGSCCSDGRHCCPAGSRCTGGGWGCSPQRWDLL
SIO_010081: GRN
subclass of: SO_0000673
so part of: GRN
location: join(1159762..1159851,1159921..1159992,1160090..1160174,1160250..1160353,1160436..1160583,1160677..1160783,1161288..1161402,1161484..1161581,1162368..1162610,1163342..1163584,1163920..1164204,1164273..1164371)
location: region:1159762-1164371:1
so has part: feature:1159762-1159851:1:exon
so has part: feature:1159921-1159992:1:exon
so has part: feature:1160090-1160174:1:exon
so has part: feature:1160250-1160353:1:exon
so has part: feature:1160436-1160583:1:exon
so has part: feature:1160677-1160783:1:exon
so has part: feature:1161288-1161402:1:exon
so has part: feature:1161484-1161581:1:exon
so has part: feature:1162368-1162610:1:exon
so has part: feature:1163342-1163584:1:exon
so has part: feature:1163920-1164204:1:exon
so has part: feature:1164273-1164371:1:exon

XP_030822308.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1159762-1159851:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1159921-1159992:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1160090-1160174:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1160250-1160353:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1160436-1160583:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1160677-1160783:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1161288-1161402:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1161484-1161581:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1162368-1162610:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1163342-1163584:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1163920-1164204:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1164273-1164371:1:exon

FAM171A2
type: Gene
subclass of: SO_0000704
RO_0002162: 87175
gene: FAM171A2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1164498..>1170425)
location: region:1164498-1170425:-1
so has part: feature:1164498-1170425:-1:exon
subclass of: SO_0000010

115913774
type: Gene
SIO_000068: ncbigene

position:1164498:-1
position: 1164498
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1170425:-1
position: 1170425
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1164498-1170425:-1:exon

FAM171A2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 87175
gene: FAM171A2
product: family with sequence similarity 171 member A2
exception: unclassified transcription discrepancy
note: The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: inserted 2 bases in 2 codons; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins, and 84% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_030966000.1
SIO_010081: FAM171A2
subclass of: SO_0000673
so part of: FAM171A2
location: complement(join(1164498..1164790,1165482..1166407,1166438..1166736,1167333..1167459,1167735..1167851,1168039..1168215,1168297..1168455,1168566..1168658,1170071..>1170425))
location: region:1164498-1170425:-1
so has part: feature:1170071-1170425:-1:exon
so has part: feature:1168566-1168658:-1:exon
so has part: feature:1168297-1168455:-1:exon
so has part: feature:1168039-1168215:-1:exon
so has part: feature:1167735-1167851:-1:exon
so has part: feature:1167333-1167459:-1:exon
so has part: feature:1166438-1166736:-1:exon
so has part: feature:1165482-1166407:-1:exon
so has part: feature:1164498-1164790:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1170071-1170425:-1:exon

position:1170071:-1
position: 1170071
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1168566-1168658:-1:exon

position:1168566:-1
position: 1168566
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1168658:-1
position: 1168658
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1168297-1168455:-1:exon

position:1168297:-1
position: 1168297
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1168455:-1
position: 1168455
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1168039-1168215:-1:exon

position:1168039:-1
position: 1168039
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1168215:-1
position: 1168215
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1167735-1167851:-1:exon

position:1167735:-1
position: 1167735
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1167851:-1
position: 1167851
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1167333-1167459:-1:exon

position:1167333:-1
position: 1167333
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1167459:-1
position: 1167459
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1166438-1166736:-1:exon

position:1166438:-1
position: 1166438
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1166736:-1
position: 1166736
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1165482-1166407:-1:exon

position:1165482:-1
position: 1165482
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1166407:-1
position: 1166407
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:1164498-1164790:-1:exon

position:1164790:-1
position: 1164790
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

FAM171A2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 87175
gene: FAM171A2
exception: unclassified translation discrepancy
note: The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: inserted 2 bases in 2 codons; Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: LOW QUALITY PROTEIN: protein FAM171A2
translation: PLVCVPPCWDGGRACWVSGCPRHPVPCPCPLCPRRVPCAVSPEVLLRVQVLESGSLAPLPQAALDVFGGRSALAAGSTDQAGSAVLPVPYRLGSWLLVTAARRGYVTASVPWRVTKLPLYASISLYLLPERPATLILYEDLVQILLGSPGGRGQPWAQFPRRAARLPRSSTYSQLAASLTAASGPGPARAFPAFLGAEQDGSGNGTWLELAPVAAVSVHLFTGNGTEVPLAGPVHLSVPLGPDAAAVVATSVPAWRFDPKSGLWVRNGTGLIRKEGRQLYWTFVSSQLGYWAAALPSPSTGLVAMAAGVTDITTYHTIFLLTILGALALLVLILLCLLIYYCRRRCLKPRAQHRKLPLPGPLDAARRDQATSVSQLDLLCGGSHLETASSGGDTDLPTPSLPPSTREADPPPAGLLPAAAPPAPRRPQAPGGHAGPAPPPARPFGLRAARWWTGCSRPTSTPRAAPPARGRPRPRSPVTGRSPPSTRCPSRPAAASLAPGPLLLCGPLERGGGPEDVYRXVMPTLLIPARYMRLAPGEPEGPRSGTGPGSGGGRGAPRRPPPPGSPSRXGENWAGARAPQPVSGSVAIPVLLDGSAVAQLNGELQALAGQQLLELAGPPPPRAWFVSLDGRSSQVRHSYIDLQGSERGPGPAPPPRLPRAAGGGEEDGGPRPPLPAASPEDSSLAPLLEAGSGGRRGGGSGRSSASEAPRDSLTSPEEEALTEAGDGGDEGGDRKSPWQKREERPLMVFNVKTGGAGTAPRASGASKLP
SIO_010081: FAM171A2
subclass of: SO_0000673
so part of: FAM171A2
location: complement(join(1164736..1164790,1165482..1166407,1166438..1166736,1167333..1167459,1167735..1167851,1168039..1168215,1168297..1168455,1168566..1168658,1170071..>1170425))
location: region:1164736-1170425:-1
so has part: feature:1170071-1170425:-1:exon
so has part: feature:1168566-1168658:-1:exon
so has part: feature:1168297-1168455:-1:exon
so has part: feature:1168039-1168215:-1:exon
so has part: feature:1167735-1167851:-1:exon
so has part: feature:1167333-1167459:-1:exon
so has part: feature:1166438-1166736:-1:exon
so has part: feature:1165482-1166407:-1:exon
so has part: feature:1164736-1164790:-1:exon

XP_030821860.1
type: Protein
SIO_000068: ncbiprotein

position:1164736:-1
position: 1164736
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1170071-1170425:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1168566-1168658:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1168297-1168455:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1168039-1168215:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1167735-1167851:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1167333-1167459:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1166438-1166736:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1165482-1166407:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1164736-1164790:-1:exon

ITGA2B
type: Gene
subclass of: SO_0000704
RO_0002162: 87175
gene: ITGA2B
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1174211..1182568)
location: region:1174211-1182568:-1
so has part: feature:1174211-1182568:-1:exon
subclass of: SO_0000010

115914057
type: Gene
SIO_000068: ncbigene

position:1174211:-1
position: 1174211
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1182568:-1
position: 1182568
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1174211-1182568:-1:exon

ITGA2B
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 87175
gene: ITGA2B
product: integrin subunit alpha 2b
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 16 Proteins, and 73% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_030966407.1
SIO_010081: ITGA2B
subclass of: SO_0000673
so part of: ITGA2B
location: complement(join(1174211..1174382,1174706..1174828,1174904..1175008,1175200..1175313,1175482..1175607,1175687..1175839,1175933..1176035,1176103..1176183,1176296..1176375,1176459..1176551,1177414..1177561,1177643..1177713,1178424..1178537,1178771..1178922,1179020..1179075,1179222..1179326,1179403..1179448,1179536..1179718,1179827..1180035,1180164..1180216,1180331..1180390,1180488..1180531,1180778..1180825,1180907..1181032,1181197..1181242,1181569..1181618,1181694..1181853,1181933..1182030,1182107..1182237,1182305..1182568))
location: region:1174211-1182568:-1
so has part: feature:1182305-1182568:-1:exon
so has part: feature:1182107-1182237:-1:exon
so has part: feature:1181933-1182030:-1:exon
so has part: feature:1181694-1181853:-1:exon
so has part: feature:1181569-1181618:-1:exon
so has part: feature:1181197-1181242:-1:exon
so has part: feature:1180907-1181032:-1:exon
so has part: feature:1180778-1180825:-1:exon
so has part: feature:1180488-1180531:-1:exon
so has part: feature:1180331-1180390:-1:exon
so has part: feature:1180164-1180216:-1:exon
so has part: feature:1179827-1180035:-1:exon
so has part: feature:1179536-1179718:-1:exon
so has part: feature:1179403-1179448:-1:exon
so has part: feature:1179222-1179326:-1:exon
so has part: feature:1179020-1179075:-1:exon
so has part: feature:1178771-1178922:-1:exon
so has part: feature:1178424-1178537:-1:exon
so has part: feature:1177643-1177713:-1:exon
so has part: feature:1177414-1177561:-1:exon
so has part: feature:1176459-1176551:-1:exon
so has part: feature:1176296-1176375:-1:exon
so has part: feature:1176103-1176183:-1:exon
so has part: feature:1175933-1176035:-1:exon
so has part: feature:1175687-1175839:-1:exon
so has part: feature:1175482-1175607:-1:exon
so has part: feature:1175200-1175313:-1:exon
so has part: feature:1174904-1175008:-1:exon
so has part: feature:1174706-1174828:-1:exon
so has part: feature:1174211-1174382:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1182305-1182568:-1:exon

position:1182305:-1
position: 1182305
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1182107-1182237:-1:exon

position:1182107:-1
position: 1182107
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1182237:-1
position: 1182237
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1181933-1182030:-1:exon

position:1181933:-1
position: 1181933
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1182030:-1
position: 1182030
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1181694-1181853:-1:exon

position:1181694:-1
position: 1181694
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1181853:-1
position: 1181853
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1181569-1181618:-1:exon

position:1181569:-1
position: 1181569
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1181618:-1
position: 1181618
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1181197-1181242:-1:exon

position:1181197:-1
position: 1181197
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1181242:-1
position: 1181242
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1180907-1181032:-1:exon

position:1180907:-1
position: 1180907
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1181032:-1
position: 1181032
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1180778-1180825:-1:exon

position:1180778:-1
position: 1180778
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1180825:-1
position: 1180825
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:1180488-1180531:-1:exon

position:1180488:-1
position: 1180488
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1180531:-1
position: 1180531
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:1180331-1180390:-1:exon

position:1180331:-1
position: 1180331
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1180390:-1
position: 1180390
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:1180164-1180216:-1:exon

position:1180164:-1
position: 1180164
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1180216:-1
position: 1180216
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:1179827-1180035:-1:exon

position:1179827:-1
position: 1179827
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1180035:-1
position: 1180035
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:1179536-1179718:-1:exon

position:1179536:-1
position: 1179536
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1179718:-1
position: 1179718
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:1179403-1179448:-1:exon

position:1179403:-1
position: 1179403
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1179448:-1
position: 1179448
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:1179222-1179326:-1:exon

position:1179222:-1
position: 1179222
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1179326:-1
position: 1179326
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:1179020-1179075:-1:exon

position:1179020:-1
position: 1179020
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1179075:-1
position: 1179075
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:1178771-1178922:-1:exon

position:1178771:-1
position: 1178771
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1178922:-1
position: 1178922
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:1178424-1178537:-1:exon

position:1178424:-1
position: 1178424
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1178537:-1
position: 1178537
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:1177643-1177713:-1:exon

position:1177643:-1
position: 1177643
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1177713:-1
position: 1177713
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:1177414-1177561:-1:exon

position:1177414:-1
position: 1177414
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1177561:-1
position: 1177561
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:1176459-1176551:-1:exon

position:1176459:-1
position: 1176459
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1176551:-1
position: 1176551
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 22
SIO_000628: feature:1176296-1176375:-1:exon

position:1176296:-1
position: 1176296
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1176375:-1
position: 1176375
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 23
SIO_000628: feature:1176103-1176183:-1:exon

position:1176103:-1
position: 1176103
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1176183:-1
position: 1176183
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 24
SIO_000628: feature:1175933-1176035:-1:exon

position:1175933:-1
position: 1175933
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1176035:-1
position: 1176035
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 25
SIO_000628: feature:1175687-1175839:-1:exon

position:1175687:-1
position: 1175687
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1175839:-1
position: 1175839
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 26
SIO_000628: feature:1175482-1175607:-1:exon

position:1175482:-1
position: 1175482
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1175607:-1
position: 1175607
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 27
SIO_000628: feature:1175200-1175313:-1:exon

position:1175200:-1
position: 1175200
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1175313:-1
position: 1175313
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 28
SIO_000628: feature:1174904-1175008:-1:exon

position:1174904:-1
position: 1174904
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1175008:-1
position: 1175008
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 29
SIO_000628: feature:1174706-1174828:-1:exon

position:1174706:-1
position: 1174706
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1174828:-1
position: 1174828
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 30
SIO_000628: feature:1174211-1174382:-1:exon

position:1174382:-1
position: 1174382
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

ITGA2B
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 87175
gene: ITGA2B
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: integrin alpha-IIb
translation: MALLRVLLLLGGLRLPPTLGLLQEPPTIYEGPPGSYFGFALDFHRSEGRPSVAVGAPRANTSQPGVAQPGAVFLCSWPPDRTPCHPLPIDTAGDESESQGTLELRTYKSHQWLGASVTSWEGNLVVCAPLQHWNALEGQHEAFRTPTGTCFVRSPERAVWYSPCRDRTMASTYRQTSYAHDKRYCEIGFSAAVTADGTLVLGAPGGYYFTGLVYSVELDKILRRFLGTSLLWLGSPGRPTEPVFGDYEDGYRGYSVAVGEFDGNPKTKEYVVGVPNKSNTRGEVEIFTAGVTLRRLRGIASEQVASYFGHTVAMADVDGDGRDDLLVGAPLFMARRSDGQRSELGRLYLYLGRGQQRLAGPPQTLTGTHPYGRFGAAIASLGDLDKDGFGDVAVGAPQGGDGGSGQVFIFRGHSEGLAPVPTQRLESPFPGPAAFGFALRGATDLDGNGYADLLVGAHGAAKVAVYLGLPVVVARTQLSVPDGLNPEILDCSLPNSSVPVSCFHVEFCVSVTGQDIPRSIQLEAELQLDRLKPRASRRVLLLRGHQSSWQEALLVAPGAPPVCSNVTAYLRDKAEFKDKLSPVALSVALTLPREAPGLVLYGDTLVQAQTHIILEDCGDDNLCVPDLHLAADTPSQRLLIGAEAVLSLRANATNAGEGAFEAELRVQLPPGTHYQAARSSIPGQEKLSCNPKKENGTHVVLCELGNPMKAGARITVVMELSVSGLEDMGDAITFHLQLRSKNSPSPSHGSVAVTVPVEAEAEMELRGNSLPATMVLPTSWHGAQGSRRPEDHGIRVEHVYELHNKGPGTVSGVTLSLAVPHLLGEHVLLYLLELGTEGGTNCSQHPALNPAQLEISAPTAAAPGNGSQHRERREAEPPPGAGLGDQGLGELVRVDCDNATCVDITCHVPSLGKDQRALVSVHALLWMDTLQQREHLLEFRIQSQAWFNTSAMPYRVQPRVLPSGKAETETCVVRSSPGGDGAVPVGWVVLGALAGLLLLTLLILLMWKMGFFKRTRPPAEGDTEEPGQAQEPGSAQEPGQAQD
SIO_010081: ITGA2B
subclass of: SO_0000673
so part of: ITGA2B
location: complement(join(1174275..1174382,1174706..1174828,1174904..1175008,1175200..1175313,1175482..1175607,1175687..1175839,1175933..1176035,1176103..1176183,1176296..1176375,1176459..1176551,1177414..1177561,1177643..1177713,1178424..1178537,1178771..1178922,1179020..1179075,1179222..1179326,1179403..1179448,1179536..1179718,1179827..1180035,1180164..1180216,1180331..1180390,1180488..1180531,1180778..1180825,1180907..1181032,1181197..1181242,1181569..1181618,1181694..1181853,1181933..1182030,1182107..1182237,1182305..1182450))
location: region:1174275-1182450:-1
so has part: feature:1182305-1182450:-1:exon
so has part: feature:1182107-1182237:-1:exon
so has part: feature:1181933-1182030:-1:exon
so has part: feature:1181694-1181853:-1:exon
so has part: feature:1181569-1181618:-1:exon
so has part: feature:1181197-1181242:-1:exon
so has part: feature:1180907-1181032:-1:exon
so has part: feature:1180778-1180825:-1:exon
so has part: feature:1180488-1180531:-1:exon
so has part: feature:1180331-1180390:-1:exon
so has part: feature:1180164-1180216:-1:exon
so has part: feature:1179827-1180035:-1:exon
so has part: feature:1179536-1179718:-1:exon
so has part: feature:1179403-1179448:-1:exon
so has part: feature:1179222-1179326:-1:exon
so has part: feature:1179020-1179075:-1:exon
so has part: feature:1178771-1178922:-1:exon
so has part: feature:1178424-1178537:-1:exon
so has part: feature:1177643-1177713:-1:exon
so has part: feature:1177414-1177561:-1:exon
so has part: feature:1176459-1176551:-1:exon
so has part: feature:1176296-1176375:-1:exon
so has part: feature:1176103-1176183:-1:exon
so has part: feature:1175933-1176035:-1:exon
so has part: feature:1175687-1175839:-1:exon
so has part: feature:1175482-1175607:-1:exon
so has part: feature:1175200-1175313:-1:exon
so has part: feature:1174904-1175008:-1:exon
so has part: feature:1174706-1174828:-1:exon
so has part: feature:1174275-1174382:-1:exon

XP_030822267.1
type: Protein
SIO_000068: ncbiprotein

position:1174275:-1
position: 1174275
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1182450:-1
position: 1182450
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1182305-1182450:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1182107-1182237:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1181933-1182030:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1181694-1181853:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1181569-1181618:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1181197-1181242:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1180907-1181032:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1180778-1180825:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1180488-1180531:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1180331-1180390:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1180164-1180216:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1179827-1180035:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1179536-1179718:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1179403-1179448:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1179222-1179326:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1179020-1179075:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1178771-1178922:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:1178424-1178537:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:1177643-1177713:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:1177414-1177561:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:1176459-1176551:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:1176296-1176375:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:1176103-1176183:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:1175933-1176035:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:1175687-1175839:-1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:1175482-1175607:-1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:1175200-1175313:-1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:1174904-1175008:-1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:1174706-1174828:-1:exon

urn:…
SIO_000300: 30
SIO_000628: feature:1174275-1174382:-1:exon

GPATCH8
type: Gene
subclass of: SO_0000704
RO_0002162: 87175
gene: GPATCH8
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1183626..1239263)
location: region:1183626-1239263:-1
so has part: feature:1183626-1239263:-1:exon
subclass of: SO_0000010

115914000
type: Gene
SIO_000068: ncbigene

position:1183626:-1
position: 1183626
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1239263:-1
position: 1239263
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1183626-1239263:-1:exon

GPATCH8
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 87175
gene: GPATCH8
product: G-patch domain containing 8
exception: unclassified transcription discrepancy
note: The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: deleted 3 bases in 2 codons; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 7 ESTs, 11 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
transcript id: XM_030966333.1
SIO_010081: GPATCH8
subclass of: SO_0000673
so part of: GPATCH8
location: complement(join(1183626..1189690,1190025..1190155,1199354..1199497,1203611..1203697,1204143..1204210,1216009..1216081,1223847..1223921,1239171..1239263))
location: region:1183626-1239263:-1
so has part: feature:1239171-1239263:-1:exon
so has part: feature:1223847-1223921:-1:exon
so has part: feature:1216009-1216081:-1:exon
so has part: feature:1204143-1204210:-1:exon
so has part: feature:1203611-1203697:-1:exon
so has part: feature:1199354-1199497:-1:exon
so has part: feature:1190025-1190155:-1:exon
so has part: feature:1183626-1189690:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1239171-1239263:-1:exon

position:1239171:-1
position: 1239171
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1223847-1223921:-1:exon

position:1223847:-1
position: 1223847
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1223921:-1
position: 1223921
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1216009-1216081:-1:exon

position:1216009:-1
position: 1216009
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1216081:-1
position: 1216081
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1204143-1204210:-1:exon

position:1204143:-1
position: 1204143
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1204210:-1
position: 1204210
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1203611-1203697:-1:exon

position:1203611:-1
position: 1203611
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1203697:-1
position: 1203697
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1199354-1199497:-1:exon

position:1199354:-1
position: 1199354
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1199497:-1
position: 1199497
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1190025-1190155:-1:exon

position:1190025:-1
position: 1190025
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1190155:-1
position: 1190155
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1183626-1189690:-1:exon

position:1189690:-1
position: 1189690
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

GPATCH8
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 87175
gene: GPATCH8
exception: unclassified translation discrepancy
note: The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: deleted 3 bases in 2 codons; Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: LOW QUALITY PROTEIN: G patch domain-containing protein 8
translation: MADRFSRFNEDRDFQGNHFDQYEEGHLEIEQASLDKPIESDNIGHRLLQKHGWKLGQGLGKSLQGRTDPIPIVVKYDVMGMGRMEMELDYAEDATERRRVLEVEKEDTEELRQKYKDYVDKEKAIAKALEDLRANFYCELCDKQYQKHQEFDNHINSYDHAHKQRLKDLKQREFARNVSSRSRKDERKQEKALRRLHELAEQRRQPECAPGSGPMFRTTTVAVDEEGGDDDDSAANSGSFVQTSSGQGTEMTTDRGFLNTGQGTVMPGQTSQGAQAISFGIKSSLGTPLQKIGVSFSFAKKTPVKLETIASVFKDHVDESSSADGAKGDERGSSEGGSLQKSGEGEGTNNSDGKGEDNDQHDKDSGALASTLSKLKKMRREDGPTAVEPEYYHYIPPAHCKVKPNFQFLLFMKATEQTEAENVNKKNAHEVKKGGSPKPKPSKHMEKAAESTGQQKEQSTTETSAQQGKTERKDIPENENTQESKHLPESNPPEPDTAKEAPPPASGCRDGSEGPKHPTGPFFPVLSKDESTTLQWPSELLIFTKAEPSVSYSCNPLYFDFKLSRNKDAKGKGAEKSKDPGGLCKDNTQSTEPGEASKAKETESVGNSSAQKMENKSQSKQESSLGSMGKGEGEDSSKSITGKSKSGRSHKHKKKKKHKKSSRHKRKHKEEAEEKARKAELGEEKPKKRKRHRHKKGKSSLSTESDRALKPELSEDCSHFQKKKRCSQESQRKSLSAEEGSSSKKEDGGNSCQEHSSKRHKAELQQVPGARRRCPALSQPRSSCRSRQSSGDDDSDEGSPGKHCHQKSPSQYSDDDYESGSEHSHSRSRSGRRRSSHGSYSSSSEASSGHSRYSRHRSYSDDSYSDYSERSRCHSKRSQDSEDDSDYNGSNHRSKRRKYSSSEDDYSSSRSRSRSRSRSRSHPRGRSRSRSRGRSRSSSCSRSRSKRRSRSGTGRSWKRSRSYSRDRSRSTRSHSQRSLSRKGSRGHESPEERRSGRRDFIRSKIYRSQSPHYFRTGRGEGALPKKEDGKGEDLKGSSSLSQNSSGSGMGRASEGDCSPEERNSVTAKLLLEKVQSRKVEKKPCITDEMLSGANKVGIKLKDPPQGYFGPKLPPSLGNKPVLPLIGKLPTIRKPNSKRYEESGLERGEEQELSDAEDGSQGMEEGQLAGQSLLEDVVMVIQDKPLDEQKRDEASVEMPSLPLDTPALPECFGSGDLVMPHNFLSDPSDGDGLEPMDGGNQPVPVETSMMPLVPDVEHFPGYVPQSGEPSMEGDREGGEDSSLAPLESQPITFTPEEMEKYSKLQQAAQQHIQQQLLAKQVKAFPTSAALAPAAPALQPIHIQQPAAASATSITTVQHAILQHHAAAAAAAIGIHPHPHPQPLAQVHHIPQPHLTPISLSHLTHSIIPGHPATFLASHPIHIIPASAIHPGPFTFHPVPHALYPTLLAPRPAAAAAATALHLHPLLHPIFSGQDLQHPPSHGT
SIO_010081: GPATCH8
subclass of: SO_0000673
so part of: GPATCH8
location: complement(join(1185862..1189690,1190025..1190155,1199354..1199497,1203611..1203697,1204143..1204210,1216009..1216081,1223847..1223921,1239171..1239215))
location: region:1185862-1239215:-1
so has part: feature:1239171-1239215:-1:exon
so has part: feature:1223847-1223921:-1:exon
so has part: feature:1216009-1216081:-1:exon
so has part: feature:1204143-1204210:-1:exon
so has part: feature:1203611-1203697:-1:exon
so has part: feature:1199354-1199497:-1:exon
so has part: feature:1190025-1190155:-1:exon
so has part: feature:1185862-1189690:-1:exon

XP_030822193.1
type: Protein
SIO_000068: ncbiprotein

position:1185862:-1
position: 1185862
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1239215:-1
position: 1239215
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1239171-1239215:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1223847-1223921:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1216009-1216081:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1204143-1204210:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1203611-1203697:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1199354-1199497:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1190025-1190155:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1185862-1189690:-1:exon

FZD2
type: Gene
subclass of: SO_0000704
RO_0002162: 87175
gene: FZD2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1248246..1250629
location: region:1248246-1250629:1
so has part: feature:1248246-1250629:1:exon
subclass of: SO_0000010

115914103
type: Gene
SIO_000068: ncbigene

position:1248246:1
position: 1248246
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1250629:1
position: 1250629
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1248246-1250629:1:exon

FZD2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 87175
gene: FZD2
product: frizzled class receptor 2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 ESTs, 61 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_030966453.1
SIO_010081: FZD2
subclass of: SO_0000673
so part of: FZD2
location: 1248246..1250629
location: region:1248246-1250629:1
so has part: feature:1248246-1250629:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1248246-1250629:1:exon

FZD2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 87175
gene: FZD2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: frizzled-2
translation: MGPPGVLPALAWLLAGLSVPALSRAQLHGEKGISIPDHGFCQPISIPLCTDIAYNQTIMPNLLGHTNQEDAGLEVHQFYPLVKVQCSLELKFFLCSMYAPVCTVLEQAIPPCRSICERARQGCEALMNKFGFQWPERLRCENFPRHGAEQICVGQNHSEDGGSPALLTSATPLAGQGTPGAPRYATLDHPFHCPRALKVPSYLNYKFLGEKDCAAPCEPTRPDGHMFFNEDEIRFARIWILIWSVLCCASTFFTVTTYLVDMQRFRYPERPIIFLSGCYTMVSVAYIAGFVLEERVVCNERFQEDGYRTVVQGTKKEGCTILFMMLYFFSMASSIWWVILSLTWFLAAGMKWGHEAIEANSQYFHLAAWAVPAVKTITILAMGQIDGDLLSGVCFVGLNNIDPLRGFVLAPLFVYLFIGTSFLLAGFVSLFRIRTIMKHGGTKTEKLERLMVRIGVFSVLYTVPATIVIACYFYEQAFREHWERSWISQNCKSLAIPCPLHFTPRMTPDFTVYMIKYLMTLIVGITSGFWIWSGKTLHSWRKFYTRLTNSKQGETTV
SIO_010081: FZD2
subclass of: SO_0000673
so part of: FZD2
location: 1248840..1250513
location: region:1248840-1250513:1
so has part: feature:1248840-1250513:1:exon

XP_030822313.1
type: Protein
SIO_000068: ncbiprotein

position:1248840:1
position: 1248840
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1250513:1
position: 1250513
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1248840-1250513:1:exon

PSMD11
type: Gene
subclass of: SO_0000704
RO_0002162: 87175
gene: PSMD11
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1259086..1278627
location: region:1259086-1278627:1
so has part: feature:1259086-1278627:1:exon
subclass of: SO_0000010

115914097
type: Gene
SIO_000068: ncbigene

position:1259086:1
position: 1259086
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1278627:1
position: 1278627
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1259086-1278627:1:exon

PSMD11
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 87175
gene: PSMD11
product: proteasome 26S subunit, non-ATPase 11
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 19 ESTs, 16 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
transcript id: XM_030966445.1
SIO_010081: PSMD11
subclass of: SO_0000673
so part of: PSMD11
location: join(1259086..1259210,1260826..1260927,1265968..1266092,1267872..1267943,1268251..1268308,1270454..1270648,1271647..1271791,1272043..1272103,1273523..1273585,1274400..1274525,1275045..1275080,1276260..1276311,1277153..1277295,1277412..1278627)
location: region:1259086-1278627:1
so has part: feature:1259086-1259210:1:exon
so has part: feature:1260826-1260927:1:exon
so has part: feature:1265968-1266092:1:exon
so has part: feature:1267872-1267943:1:exon
so has part: feature:1268251-1268308:1:exon
so has part: feature:1270454-1270648:1:exon
so has part: feature:1271647-1271791:1:exon
so has part: feature:1272043-1272103:1:exon
so has part: feature:1273523-1273585:1:exon
so has part: feature:1274400-1274525:1:exon
so has part: feature:1275045-1275080:1:exon
so has part: feature:1276260-1276311:1:exon
so has part: feature:1277153-1277295:1:exon
so has part: feature:1277412-1278627:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1259086-1259210:1:exon

position:1259210:1
position: 1259210
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1260826-1260927:1:exon

position:1260826:1
position: 1260826
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1260927:1
position: 1260927
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1265968-1266092:1:exon

position:1265968:1
position: 1265968
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1266092:1
position: 1266092
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1267872-1267943:1:exon

position:1267872:1
position: 1267872
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1267943:1
position: 1267943
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1268251-1268308:1:exon

position:1268251:1
position: 1268251
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1268308:1
position: 1268308
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1270454-1270648:1:exon

position:1270454:1
position: 1270454
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1270648:1
position: 1270648
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1271647-1271791:1:exon

position:1271647:1
position: 1271647
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1271791:1
position: 1271791
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1272043-1272103:1:exon

position:1272043:1
position: 1272043
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1272103:1
position: 1272103
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:1273523-1273585:1:exon

position:1273523:1
position: 1273523
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1273585:1
position: 1273585
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:1274400-1274525:1:exon

position:1274400:1
position: 1274400
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1274525:1
position: 1274525
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:1275045-1275080:1:exon

position:1275045:1
position: 1275045
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1275080:1
position: 1275080
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:1276260-1276311:1:exon

position:1276260:1
position: 1276260
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1276311:1
position: 1276311
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:1277153-1277295:1:exon

position:1277153:1
position: 1277153
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1277295:1
position: 1277295
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:1277412-1278627:1:exon

position:1277412:1
position: 1277412
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

PSMD11
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 87175
gene: PSMD11
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: 26S proteasome non-ATPase regulatory subunit 11
translation: MAAAAVLELQRAQSLLSTDREASIGILHSIVKRDVQENDEEAVQVKEQSILELGSLLAKTGQAEELGGLLKYVRPFLNSISKAKAARLVRSLLDLFLDMEAATGQEVDLCLECIEWAKSEKRTFLRQALEARLVSLYFDTKRYQEALQLGSQLLRELKKMDDKALLVEVQLLESKTYHALSNLPKARAALTSARTTANAIYCPPKLQAALDMQSGIIHAAEEKDWKTAYSYFYEAFEGNDSIDNPKAITALKYMLLCKIMLNSPEDVQALVSGKLALRYAGRQTEALKCVAQASKNRSLADFEKALTDYKVELRDDPIINTHLAKLYDNLLEQNLIRVIEPFSRVQIEHISSLIKLSKAEVERKLSQMILDKKFHGILDQGEGVLIIFDEPPVDKTYEAALETIQNMSKVVDSLYNKAKKLT
SIO_010081: PSMD11
subclass of: SO_0000673
so part of: PSMD11
location: join(1259120..1259210,1260826..1260927,1265968..1266092,1267872..1267943,1268251..1268308,1270454..1270648,1271647..1271791,1272043..1272103,1273523..1273585,1274400..1274525,1275045..1275080,1276260..1276311,1277153..1277295)
location: region:1259120-1277295:1
so has part: feature:1259120-1259210:1:exon
so has part: feature:1260826-1260927:1:exon
so has part: feature:1265968-1266092:1:exon
so has part: feature:1267872-1267943:1:exon
so has part: feature:1268251-1268308:1:exon
so has part: feature:1270454-1270648:1:exon
so has part: feature:1271647-1271791:1:exon
so has part: feature:1272043-1272103:1:exon
so has part: feature:1273523-1273585:1:exon
so has part: feature:1274400-1274525:1:exon
so has part: feature:1275045-1275080:1:exon
so has part: feature:1276260-1276311:1:exon
so has part: feature:1277153-1277295:1:exon

XP_030822305.1
type: Protein
SIO_000068: ncbiprotein

position:1259120:1
position: 1259120
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1259120-1259210:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1260826-1260927:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1265968-1266092:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1267872-1267943:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1268251-1268308:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1270454-1270648:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1271647-1271791:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1272043-1272103:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1273523-1273585:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1274400-1274525:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1275045-1275080:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1276260-1276311:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1277153-1277295:1:exon

CDK5R1
type: Gene
subclass of: SO_0000704
RO_0002162: 87175
gene: CDK5R1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1281333..1283760
location: region:1281333-1283760:1
so has part: feature:1281333-1283760:1:exon
subclass of: SO_0000010

115914068
type: Gene
SIO_000068: ncbigene

position:1281333:1
position: 1281333
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1283760:1
position: 1283760
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1281333-1283760:1:exon

CDK5R1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 87175
gene: CDK5R1
product: cyclin dependent kinase 5 regulatory subunit 1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 21 ESTs, 18 Proteins, and 95% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_030966420.1
SIO_010081: CDK5R1
subclass of: SO_0000673
so part of: CDK5R1
location: 1281333..1283760
location: region:1281333-1283760:1
so has part: feature:1281333-1283760:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1281333-1283760:1:exon

CDK5R1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 87175
gene: CDK5R1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: cyclin-dependent kinase 5 activator 1
translation: MGTVLSLSPSYRKAPLFEEGRPRWGHYTAVQNSKNAKEKGLKRHSLISVLPWKRIAAVSAKKKSSKKVQPNGGYQSNVTHLNNENLKKSLSCANLATFAPRRPPAAAAAALASAQKAPPAAPAAAAATPRRVVVQASTSELLRCLGEFLCRRCYRLKHLSPTDPVLWLRSVDRSLLLQGWQDQGFITPANVVFLYMLCRDVISAEVASDHELQAVLLTCLYLSYSYMGNEISYPLKPFLVESCKEAFWDRCLSIIDLMSPKMLQVNADPHYFTQVFADLKKESGSEEKGRLLIGLDR
SIO_010081: CDK5R1
subclass of: SO_0000673
so part of: CDK5R1
location: 1281477..1282370
location: region:1281477-1282370:1
so has part: feature:1281477-1282370:1:exon

XP_030822280.1
type: Protein
SIO_000068: ncbiprotein

position:1281477:1
position: 1281477
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1282370:1
position: 1282370
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1281477-1282370:1:exon

MYO1D
type: Gene
subclass of: SO_0000704
RO_0002162: 87175
gene: MYO1D
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1285421..1454029)
location: region:1285421-1454029:-1
so has part: feature:1285421-1454029:-1:exon
subclass of: SO_0000010

115914067
type: Gene
SIO_000068: ncbigene

position:1285421:-1
position: 1285421
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1454029:-1
position: 1454029
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1285421-1454029:-1:exon

MYO1D
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 87175
gene: MYO1D
product: myosin ID
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 ESTs, 23 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_030966419.1
SIO_010081: MYO1D
subclass of: SO_0000673
so part of: MYO1D
location: complement(join(1285421..1286288,1347758..1347912,1354792..1354905,1363441..1363545,1363941..1364085,1368665..1368888,1381223..1381430,1387741..1387907,1397291..1397423,1398797..1398871,1400946..1401016,1405663..1405833,1406471..1406585,1406666..1406811,1407974..1408177,1409284..1409400,1410427..1410522,1411343..1411396,1413100..1413265,1414086..1414179,1414984..1415192,1453848..1454029))
location: region:1285421-1454029:-1
so has part: feature:1453848-1454029:-1:exon
so has part: feature:1414984-1415192:-1:exon
so has part: feature:1414086-1414179:-1:exon
so has part: feature:1413100-1413265:-1:exon
so has part: feature:1411343-1411396:-1:exon
so has part: feature:1410427-1410522:-1:exon
so has part: feature:1409284-1409400:-1:exon
so has part: feature:1407974-1408177:-1:exon
so has part: feature:1406666-1406811:-1:exon
so has part: feature:1406471-1406585:-1:exon
so has part: feature:1405663-1405833:-1:exon
so has part: feature:1400946-1401016:-1:exon
so has part: feature:1398797-1398871:-1:exon
so has part: feature:1397291-1397423:-1:exon
so has part: feature:1387741-1387907:-1:exon
so has part: feature:1381223-1381430:-1:exon
so has part: feature:1368665-1368888:-1:exon
so has part: feature:1363941-1364085:-1:exon
so has part: feature:1363441-1363545:-1:exon
so has part: feature:1354792-1354905:-1:exon
so has part: feature:1347758-1347912:-1:exon
so has part: feature:1285421-1286288:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1453848-1454029:-1:exon

position:1453848:-1
position: 1453848
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1414984-1415192:-1:exon

position:1414984:-1
position: 1414984
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1415192:-1
position: 1415192
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1414086-1414179:-1:exon

position:1414086:-1
position: 1414086
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1414179:-1
position: 1414179
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1413100-1413265:-1:exon

position:1413100:-1
position: 1413100
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1413265:-1
position: 1413265
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1411343-1411396:-1:exon

position:1411343:-1
position: 1411343
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1411396:-1
position: 1411396
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1410427-1410522:-1:exon

position:1410427:-1
position: 1410427
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1410522:-1
position: 1410522
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1409284-1409400:-1:exon

position:1409284:-1
position: 1409284
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1409400:-1
position: 1409400
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1407974-1408177:-1:exon

position:1407974:-1
position: 1407974
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1408177:-1
position: 1408177
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:1406666-1406811:-1:exon

position:1406666:-1
position: 1406666
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1406811:-1
position: 1406811
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:1406471-1406585:-1:exon

position:1406471:-1
position: 1406471
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1406585:-1
position: 1406585
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:1405663-1405833:-1:exon

position:1405663:-1
position: 1405663
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1405833:-1
position: 1405833
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:1400946-1401016:-1:exon

position:1400946:-1
position: 1400946
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1401016:-1
position: 1401016
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:1398797-1398871:-1:exon

position:1398797:-1
position: 1398797
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1398871:-1
position: 1398871
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:1397291-1397423:-1:exon

position:1397291:-1
position: 1397291
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1397423:-1
position: 1397423
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:1387741-1387907:-1:exon

position:1387741:-1
position: 1387741
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1387907:-1
position: 1387907
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:1381223-1381430:-1:exon

position:1381223:-1
position: 1381223
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1381430:-1
position: 1381430
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:1368665-1368888:-1:exon

position:1368665:-1
position: 1368665
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1368888:-1
position: 1368888
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:1363941-1364085:-1:exon

position:1363941:-1
position: 1363941
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1364085:-1
position: 1364085
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:1363441-1363545:-1:exon

position:1363441:-1
position: 1363441
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1363545:-1
position: 1363545
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:1354792-1354905:-1:exon

position:1354792:-1
position: 1354792
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1354905:-1
position: 1354905
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:1347758-1347912:-1:exon

position:1347758:-1
position: 1347758
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1347912:-1
position: 1347912
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 22
SIO_000628: feature:1285421-1286288:-1:exon

position:1286288:-1
position: 1286288
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

MYO1D
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 87175
gene: MYO1D
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: unconventional myosin-Id
translation: MAEQESLEFGKADFVLMDAVTMPEFMANLRLRFEKGRIYTFIGEVVVSMNPYKNLNIYGRDTIEQYKGRELYERPPHLFAIADAAYKAMKRRSKDTCIVISGESGAGKTEASKYIMQYIAAITNPGQRAEVERVKNILLKSNCVLEAFGNAKTNRNDNSSRFGKYMDINFDFKGDPIGGHINNYLLEKSRVIVQQPGERSFHSFYQLLQGGSEQLLRSLHLQKDASAYSYICPGAQLKCSINDGAEFKAVADAMKVIGFKQEEIQTVYKIVAAILHLGNLKFYVDGDTPIIENSKLVSVIAELLSTKAELVEKALLFRTVATGRDVIDKQHTEQEATYGRDAFAKAIYERLFCWIVTHINDVIEVKNYDTTVHGKNTVIGVLDIYGFEIFDNNSFEQFCINYCNEKLQQLFIQLVLKQEQEEYQREGIPWKHIDYFNNQVIVDLVEQQHKGIIAILDDACMNVGKVTDEMFLEALNSKLGKHAHFSSRKLCATDKTLEFDRDFRIKHYAGDVIYSVTGFIDKNKDTLFQDFKRLMYNSSNPVLKMMWPEGKLSITEVTKRPLTAATLFKNSMIALVDNLTLKEPYYVRCIKPNDKKSPQLFDEERCRHQVEYLGLLENVRVRRAGFAYRQSYEKFLHRYKMISEFTWPNHDLPSDKEAVRKLIECHGFQHDVAYGKTKLFIRTPRTLFTLEELHAKMLVRIVLFLQKVWRGTLARLRYRRTRAALTIVRHYRRHKVRSHLRELLRRFRGVRDLPDRGRSIPWPAPPKVLLRFQEALQDIYHRWRAAELIRSVPPEVLPQLRAKVAAMELLKGHRADIGLQRAWRGNYIALKPDSPQSSGSFTPVANELKRKDKYMNILFSCHVRKVNRFNKVEDRAIFITDRHLYKMDPMKQYKVMKTIPLYNLVGLSVSNGKDQLVVFHTKDNKDLIVCLFSNDPSNDSRIGELVGVLASHFKREKRSLHVTVTNPVQCSLHGRKCTVSVETKINQPQPDFTKHRSGFVLCVPGN
SIO_010081: MYO1D
subclass of: SO_0000673
so part of: MYO1D
location: complement(join(1286132..1286288,1347758..1347912,1354792..1354905,1363441..1363545,1363941..1364085,1368665..1368888,1381223..1381430,1387741..1387907,1397291..1397423,1398797..1398871,1400946..1401016,1405663..1405833,1406471..1406585,1406666..1406811,1407974..1408177,1409284..1409400,1410427..1410522,1411343..1411396,1413100..1413265,1414086..1414179,1414984..1415192,1453848..1453942))
location: region:1286132-1453942:-1
so has part: feature:1453848-1453942:-1:exon
so has part: feature:1414984-1415192:-1:exon
so has part: feature:1414086-1414179:-1:exon
so has part: feature:1413100-1413265:-1:exon
so has part: feature:1411343-1411396:-1:exon
so has part: feature:1410427-1410522:-1:exon
so has part: feature:1409284-1409400:-1:exon
so has part: feature:1407974-1408177:-1:exon
so has part: feature:1406666-1406811:-1:exon
so has part: feature:1406471-1406585:-1:exon
so has part: feature:1405663-1405833:-1:exon
so has part: feature:1400946-1401016:-1:exon
so has part: feature:1398797-1398871:-1:exon
so has part: feature:1397291-1397423:-1:exon
so has part: feature:1387741-1387907:-1:exon
so has part: feature:1381223-1381430:-1:exon
so has part: feature:1368665-1368888:-1:exon
so has part: feature:1363941-1364085:-1:exon
so has part: feature:1363441-1363545:-1:exon
so has part: feature:1354792-1354905:-1:exon
so has part: feature:1347758-1347912:-1:exon
so has part: feature:1286132-1286288:-1:exon

XP_030822279.1
type: Protein
SIO_000068: ncbiprotein

position:1286132:-1
position: 1286132
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1453942:-1
position: 1453942
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1453848-1453942:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1414984-1415192:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1414086-1414179:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1413100-1413265:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1411343-1411396:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1410427-1410522:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1409284-1409400:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1407974-1408177:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1406666-1406811:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1406471-1406585:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1405663-1405833:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1400946-1401016:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1398797-1398871:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1397291-1397423:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1387741-1387907:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1381223-1381430:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1368665-1368888:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:1363941-1364085:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:1363441-1363545:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:1354792-1354905:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:1347758-1347912:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:1286132-1286288:-1:exon

MAP3K14
type: Gene
subclass of: SO_0000704
RO_0002162: 87175
gene: MAP3K14
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1485419..1514224
location: region:1485419-1514224:1
so has part: feature:1485419-1514224:1:exon
subclass of: SO_0000010

115914123
type: Gene
SIO_000068: ncbigene

position:1485419:1
position: 1485419
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1514224:1
position: 1514224
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1485419-1514224:1:exon

MAP3K14
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 87175
gene: MAP3K14
product: mitogen-activated protein kinase kinase kinase 14, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XM_030966484.1
SIO_010081: MAP3K14
subclass of: SO_0000673
so part of: MAP3K14
location: join(1485419..1485587,1493270..1493542,1494090..1494159,1496313..1496523,1496638..1497234,1498228..1498365,1500454..1500583,1501464..1501595,1502041..1502145,1503215..1503378,1504366..1504516,1505090..1505440,1506667..1506773,1508048..1508192,1508721..1508821,1510877..1514224)
location: region:1485419-1514224:1
so has part: feature:1485419-1485587:1:exon
so has part: feature:1493270-1493542:1:exon
so has part: feature:1494090-1494159:1:exon
so has part: feature:1496313-1496523:1:exon
so has part: feature:1496638-1497234:1:exon
so has part: feature:1498228-1498365:1:exon
so has part: feature:1500454-1500583:1:exon
so has part: feature:1501464-1501595:1:exon
so has part: feature:1502041-1502145:1:exon
so has part: feature:1503215-1503378:1:exon
so has part: feature:1504366-1504516:1:exon
so has part: feature:1505090-1505440:1:exon
so has part: feature:1506667-1506773:1:exon
so has part: feature:1508048-1508192:1:exon
so has part: feature:1508721-1508821:1:exon
so has part: feature:1510877-1514224:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1485419-1485587:1:exon

position:1485587:1
position: 1485587
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1493270-1493542:1:exon

position:1493270:1
position: 1493270
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1493542:1
position: 1493542
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1494090-1494159:1:exon

position:1494090:1
position: 1494090
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1494159:1
position: 1494159
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1496313-1496523:1:exon

position:1496313:1
position: 1496313
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1496523:1
position: 1496523
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1496638-1497234:1:exon

position:1496638:1
position: 1496638
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1497234:1
position: 1497234
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1498228-1498365:1:exon

position:1498228:1
position: 1498228
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1498365:1
position: 1498365
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1500454-1500583:1:exon

position:1500454:1
position: 1500454
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1500583:1
position: 1500583
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1501464-1501595:1:exon

position:1501464:1
position: 1501464
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1501595:1
position: 1501595
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:1502041-1502145:1:exon

position:1502041:1
position: 1502041
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1502145:1
position: 1502145
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:1503215-1503378:1:exon

position:1503215:1
position: 1503215
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1503378:1
position: 1503378
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:1504366-1504516:1:exon

position:1504366:1
position: 1504366
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1504516:1
position: 1504516
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:1505090-1505440:1:exon

position:1505090:1
position: 1505090
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1505440:1
position: 1505440
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:1506667-1506773:1:exon

position:1506667:1
position: 1506667
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1506773:1
position: 1506773
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:1508048-1508192:1:exon

position:1508048:1
position: 1508048
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1508192:1
position: 1508192
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:1508721-1508821:1:exon

position:1508721:1
position: 1508721
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1508821:1
position: 1508821
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:1510877-1514224:1:exon

position:1510877:1
position: 1510877
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

MAP3K14
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 87175
gene: MAP3K14
product: mitogen-activated protein kinase kinase kinase 14, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_030966483.1
SIO_010081: MAP3K14
subclass of: SO_0000673
so part of: MAP3K14
location: join(1485419..1485583,1493270..1493542,1494090..1494159,1496313..1496523,1496638..1497234,1498228..1498365,1500454..1500583,1501464..1501595,1502041..1502145,1503215..1503378,1504366..1504516,1505090..1505440,1506667..1506773,1508048..1508192,1508721..1508821,1510877..1514224)
location: region:1485419-1514224:1
so has part: feature:1485419-1485583:1:exon
so has part: feature:1493270-1493542:1:exon
so has part: feature:1494090-1494159:1:exon
so has part: feature:1496313-1496523:1:exon
so has part: feature:1496638-1497234:1:exon
so has part: feature:1498228-1498365:1:exon
so has part: feature:1500454-1500583:1:exon
so has part: feature:1501464-1501595:1:exon
so has part: feature:1502041-1502145:1:exon
so has part: feature:1503215-1503378:1:exon
so has part: feature:1504366-1504516:1:exon
so has part: feature:1505090-1505440:1:exon
so has part: feature:1506667-1506773:1:exon
so has part: feature:1508048-1508192:1:exon
so has part: feature:1508721-1508821:1:exon
so has part: feature:1510877-1514224:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1485419-1485583:1:exon

position:1485583:1
position: 1485583
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1493270-1493542:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1494090-1494159:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1496313-1496523:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1496638-1497234:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1498228-1498365:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1500454-1500583:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1501464-1501595:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1502041-1502145:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1503215-1503378:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1504366-1504516:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1505090-1505440:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1506667-1506773:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1508048-1508192:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1508721-1508821:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1510877-1514224:1:exon

MAP3K14
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 87175
gene: MAP3K14
product: mitogen-activated protein kinase kinase kinase 14, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_030966485.1
SIO_010081: MAP3K14
subclass of: SO_0000673
so part of: MAP3K14
location: join(1485419..1485583,1493270..1493542,1494090..1494159,1496316..1496523,1496638..1497234,1498228..1498365,1500454..1500583,1501464..1501595,1502041..1502145,1503215..1503378,1504366..1504516,1505090..1505440,1506667..1506773,1508048..1508192,1508721..1508821,1510877..1514224)
location: region:1485419-1514224:1
so has part: feature:1485419-1485583:1:exon
so has part: feature:1493270-1493542:1:exon
so has part: feature:1494090-1494159:1:exon
so has part: feature:1496316-1496523:1:exon
so has part: feature:1496638-1497234:1:exon
so has part: feature:1498228-1498365:1:exon
so has part: feature:1500454-1500583:1:exon
so has part: feature:1501464-1501595:1:exon
so has part: feature:1502041-1502145:1:exon
so has part: feature:1503215-1503378:1:exon
so has part: feature:1504366-1504516:1:exon
so has part: feature:1505090-1505440:1:exon
so has part: feature:1506667-1506773:1:exon
so has part: feature:1508048-1508192:1:exon
so has part: feature:1508721-1508821:1:exon
so has part: feature:1510877-1514224:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1485419-1485583:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1493270-1493542:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1494090-1494159:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1496316-1496523:1:exon

position:1496316:1
position: 1496316
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1496638-1497234:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1498228-1498365:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1500454-1500583:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1501464-1501595:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1502041-1502145:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1503215-1503378:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1504366-1504516:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1505090-1505440:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1506667-1506773:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1508048-1508192:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1508721-1508821:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1510877-1514224:1:exon

MAP3K14
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 87175
gene: MAP3K14
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: mitogen-activated protein kinase kinase kinase 14 isoform X1
translation: MAVMGIACQGAPDPAVKHKKELTAAEGLKETVSEKQSSVCKVEDSKKAIFHSQWKILNDVITRGTAKEETEGGCASISIIAQAECENSQEFSPTLSERSFIAHSKRYSSRSDSLDHIPNNVAHATEGRMAPTWRGRHRGRARKKRHKKRSKLKGQPVAAGRRSPRTPEQESCTPIPVQEDESHQSTLYRNSFWVPEFNKDLGYDPLPFEKPAHAPFSVGKLHSPRSQYKTELHKLISPIQCLNHVWKQRDTVPQPETLRPFPYNILPPHFPHVDNPLRAMKQNALDTYIHGDLNYQDSHLSGLNLEYNFTKCINQSVQTSSDKLSVEEYLVDALKGSVSFGEPQNLASLAKTWRGGGLELKEQFHEASENEGVLLNEKLKPVDYEYREEVHWTKCHGSLGIGSFGEVYKIEDKQTGFQCAAKKVQVEHFRAEELTTCAAVSSPSVVPLYGAVKEGPWVTIFMKLMEGGSLGQLIKQSGCLPEDRALSYLGQVLEGLEYLHAQNILHGDVKAENVLLSDDGSRALLCDFGHSAHLHPDGLGKCLVTGNYVPGTETHMAPEVVMGKRCDSKVDVWSSCCMMLHMLNGCHPWTQYYNHPLCLKIAKEPPPLREIPPSCNPLTAEIIKLGLEKEPLQRASASELKTKTSMALEEVGGVRSPWKGEYREPRHFSLNKENSAQTSLSPTVSPVSEIGSDPKLSVKVSCGSPLLPPPSLEQTEEVEGPHWNEGKELPETCDPPPLSSTPLPLKSCSHVERATTISEQELQQLEIELFLNSLSQPYSLEEQEQMLSCLSIDSPFVSDASEKNSMKASQSLRDTMSSGIHSWSSQAEGQSCSWNNLLSRSRHTDTPSCFNGVKIQIQLLSGENLHIRDFHRTKVGDIATGISSQIPVPAFSLVTKEGQPVHYNMEVPDSGIELQCTLAPDCSVGWAWRVKHGQLENRP
SIO_010081: MAP3K14
subclass of: SO_0000673
so part of: MAP3K14
location: join(1493290..1493542,1494090..1494159,1496313..1496523,1496638..1497234,1498228..1498365,1500454..1500583,1501464..1501595,1502041..1502145,1503215..1503378,1504366..1504516,1505090..1505440,1506667..1506773,1508048..1508192,1508721..1508821,1510877..1511041)
location: region:1493290-1511041:1
so has part: feature:1493290-1493542:1:exon
so has part: feature:1494090-1494159:1:exon
so has part: feature:1496313-1496523:1:exon
so has part: feature:1496638-1497234:1:exon
so has part: feature:1498228-1498365:1:exon
so has part: feature:1500454-1500583:1:exon
so has part: feature:1501464-1501595:1:exon
so has part: feature:1502041-1502145:1:exon
so has part: feature:1503215-1503378:1:exon
so has part: feature:1504366-1504516:1:exon
so has part: feature:1505090-1505440:1:exon
so has part: feature:1506667-1506773:1:exon
so has part: feature:1508048-1508192:1:exon
so has part: feature:1508721-1508821:1:exon
so has part: feature:1510877-1511041:1:exon

XP_030822343.1
type: Protein
SIO_000068: ncbiprotein

position:1493290:1
position: 1493290
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1511041:1
position: 1511041
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1493290-1493542:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1494090-1494159:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1496313-1496523:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1496638-1497234:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1498228-1498365:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1500454-1500583:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1501464-1501595:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1502041-1502145:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1503215-1503378:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1504366-1504516:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1505090-1505440:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1506667-1506773:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1508048-1508192:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1508721-1508821:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1510877-1511041:1:exon

MAP3K14
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 87175
gene: MAP3K14
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: mitogen-activated protein kinase kinase kinase 14 isoform X1
translation: MAVMGIACQGAPDPAVKHKKELTAAEGLKETVSEKQSSVCKVEDSKKAIFHSQWKILNDVITRGTAKEETEGGCASISIIAQAECENSQEFSPTLSERSFIAHSKRYSSRSDSLDHIPNNVAHATEGRMAPTWRGRHRGRARKKRHKKRSKLKGQPVAAGRRSPRTPEQESCTPIPVQEDESHQSTLYRNSFWVPEFNKDLGYDPLPFEKPAHAPFSVGKLHSPRSQYKTELHKLISPIQCLNHVWKQRDTVPQPETLRPFPYNILPPHFPHVDNPLRAMKQNALDTYIHGDLNYQDSHLSGLNLEYNFTKCINQSVQTSSDKLSVEEYLVDALKGSVSFGEPQNLASLAKTWRGGGLELKEQFHEASENEGVLLNEKLKPVDYEYREEVHWTKCHGSLGIGSFGEVYKIEDKQTGFQCAAKKVQVEHFRAEELTTCAAVSSPSVVPLYGAVKEGPWVTIFMKLMEGGSLGQLIKQSGCLPEDRALSYLGQVLEGLEYLHAQNILHGDVKAENVLLSDDGSRALLCDFGHSAHLHPDGLGKCLVTGNYVPGTETHMAPEVVMGKRCDSKVDVWSSCCMMLHMLNGCHPWTQYYNHPLCLKIAKEPPPLREIPPSCNPLTAEIIKLGLEKEPLQRASASELKTKTSMALEEVGGVRSPWKGEYREPRHFSLNKENSAQTSLSPTVSPVSEIGSDPKLSVKVSCGSPLLPPPSLEQTEEVEGPHWNEGKELPETCDPPPLSSTPLPLKSCSHVERATTISEQELQQLEIELFLNSLSQPYSLEEQEQMLSCLSIDSPFVSDASEKNSMKASQSLRDTMSSGIHSWSSQAEGQSCSWNNLLSRSRHTDTPSCFNGVKIQIQLLSGENLHIRDFHRTKVGDIATGISSQIPVPAFSLVTKEGQPVHYNMEVPDSGIELQCTLAPDCSVGWAWRVKHGQLENRP
SIO_010081: MAP3K14
subclass of: SO_0000673
so part of: MAP3K14
location: join(1493290..1493542,1494090..1494159,1496313..1496523,1496638..1497234,1498228..1498365,1500454..1500583,1501464..1501595,1502041..1502145,1503215..1503378,1504366..1504516,1505090..1505440,1506667..1506773,1508048..1508192,1508721..1508821,1510877..1511041)
location: region:1493290-1511041:1
so has part: feature:1493290-1493542:1:exon
so has part: feature:1494090-1494159:1:exon
so has part: feature:1496313-1496523:1:exon
so has part: feature:1496638-1497234:1:exon
so has part: feature:1498228-1498365:1:exon
so has part: feature:1500454-1500583:1:exon
so has part: feature:1501464-1501595:1:exon
so has part: feature:1502041-1502145:1:exon
so has part: feature:1503215-1503378:1:exon
so has part: feature:1504366-1504516:1:exon
so has part: feature:1505090-1505440:1:exon
so has part: feature:1506667-1506773:1:exon
so has part: feature:1508048-1508192:1:exon
so has part: feature:1508721-1508821:1:exon
so has part: feature:1510877-1511041:1:exon

XP_030822344.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1493290-1493542:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1494090-1494159:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1496313-1496523:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1496638-1497234:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1498228-1498365:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1500454-1500583:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1501464-1501595:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1502041-1502145:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1503215-1503378:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1504366-1504516:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1505090-1505440:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1506667-1506773:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1508048-1508192:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1508721-1508821:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1510877-1511041:1:exon

MAP3K14
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 87175
gene: MAP3K14
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: mitogen-activated protein kinase kinase kinase 14 isoform X2
translation: MAVMGIACQGAPDPAVKHKKELTAAEGLKETVSEKQSSVCKVEDSKKAIFHSQWKILNDVITRGTAKEETEGGCASISIIAQAECENSQEFSPTLSERSFIAHSKRYSRSDSLDHIPNNVAHATEGRMAPTWRGRHRGRARKKRHKKRSKLKGQPVAAGRRSPRTPEQESCTPIPVQEDESHQSTLYRNSFWVPEFNKDLGYDPLPFEKPAHAPFSVGKLHSPRSQYKTELHKLISPIQCLNHVWKQRDTVPQPETLRPFPYNILPPHFPHVDNPLRAMKQNALDTYIHGDLNYQDSHLSGLNLEYNFTKCINQSVQTSSDKLSVEEYLVDALKGSVSFGEPQNLASLAKTWRGGGLELKEQFHEASENEGVLLNEKLKPVDYEYREEVHWTKCHGSLGIGSFGEVYKIEDKQTGFQCAAKKVQVEHFRAEELTTCAAVSSPSVVPLYGAVKEGPWVTIFMKLMEGGSLGQLIKQSGCLPEDRALSYLGQVLEGLEYLHAQNILHGDVKAENVLLSDDGSRALLCDFGHSAHLHPDGLGKCLVTGNYVPGTETHMAPEVVMGKRCDSKVDVWSSCCMMLHMLNGCHPWTQYYNHPLCLKIAKEPPPLREIPPSCNPLTAEIIKLGLEKEPLQRASASELKTKTSMALEEVGGVRSPWKGEYREPRHFSLNKENSAQTSLSPTVSPVSEIGSDPKLSVKVSCGSPLLPPPSLEQTEEVEGPHWNEGKELPETCDPPPLSSTPLPLKSCSHVERATTISEQELQQLEIELFLNSLSQPYSLEEQEQMLSCLSIDSPFVSDASEKNSMKASQSLRDTMSSGIHSWSSQAEGQSCSWNNLLSRSRHTDTPSCFNGVKIQIQLLSGENLHIRDFHRTKVGDIATGISSQIPVPAFSLVTKEGQPVHYNMEVPDSGIELQCTLAPDCSVGWAWRVKHGQLENRP
SIO_010081: MAP3K14
subclass of: SO_0000673
so part of: MAP3K14
location: join(1493290..1493542,1494090..1494159,1496316..1496523,1496638..1497234,1498228..1498365,1500454..1500583,1501464..1501595,1502041..1502145,1503215..1503378,1504366..1504516,1505090..1505440,1506667..1506773,1508048..1508192,1508721..1508821,1510877..1511041)
location: region:1493290-1511041:1
so has part: feature:1493290-1493542:1:exon
so has part: feature:1494090-1494159:1:exon
so has part: feature:1496316-1496523:1:exon
so has part: feature:1496638-1497234:1:exon
so has part: feature:1498228-1498365:1:exon
so has part: feature:1500454-1500583:1:exon
so has part: feature:1501464-1501595:1:exon
so has part: feature:1502041-1502145:1:exon
so has part: feature:1503215-1503378:1:exon
so has part: feature:1504366-1504516:1:exon
so has part: feature:1505090-1505440:1:exon
so has part: feature:1506667-1506773:1:exon
so has part: feature:1508048-1508192:1:exon
so has part: feature:1508721-1508821:1:exon
so has part: feature:1510877-1511041:1:exon

XP_030822345.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1493290-1493542:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1494090-1494159:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1496316-1496523:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1496638-1497234:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1498228-1498365:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1500454-1500583:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1501464-1501595:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1502041-1502145:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1503215-1503378:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1504366-1504516:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1505090-1505440:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1506667-1506773:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1508048-1508192:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1508721-1508821:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1510877-1511041:1:exon

FMNL1
type: Gene
subclass of: SO_0000704
RO_0002162: 87175
gene: FMNL1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1515329..1535107)
location: region:1515329-1535107:-1
so has part: feature:1515329-1535107:-1:exon
subclass of: SO_0000010

115913775
type: Gene
SIO_000068: ncbigene

position:1515329:-1
position: 1515329
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1535107:-1
position: 1535107
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1515329-1535107:-1:exon

FMNL1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 87175
gene: FMNL1
product: formin like 1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, 2 Proteins, and 96% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_030966001.1
SIO_010081: FMNL1
subclass of: SO_0000673
so part of: FMNL1
location: complement(join(1515329..1516523,1517392..1517515,1517662..1517754,1517981..1518082,1518266..1518429,1518515..1518644,1519305..1519385,1519486..1519554,1520249..1520483,1521636..1521838,1522405..1522526,1522866..1522919,1523106..1523325,1523405..1523506,1523607..1523756,1524102..1524212,1524670..1524744,1525057..1525150,1525232..1525308,1525613..1525721,1526806..1526937,1527150..1527233,1527749..1527822,1527935..1528018,1528258..1528341,1535002..1535107))
location: region:1515329-1535107:-1
so has part: feature:1535002-1535107:-1:exon
so has part: feature:1528258-1528341:-1:exon
so has part: feature:1527935-1528018:-1:exon
so has part: feature:1527749-1527822:-1:exon
so has part: feature:1527150-1527233:-1:exon
so has part: feature:1526806-1526937:-1:exon
so has part: feature:1525613-1525721:-1:exon
so has part: feature:1525232-1525308:-1:exon
so has part: feature:1525057-1525150:-1:exon
so has part: feature:1524670-1524744:-1:exon
so has part: feature:1524102-1524212:-1:exon
so has part: feature:1523607-1523756:-1:exon
so has part: feature:1523405-1523506:-1:exon
so has part: feature:1523106-1523325:-1:exon
so has part: feature:1522866-1522919:-1:exon
so has part: feature:1522405-1522526:-1:exon
so has part: feature:1521636-1521838:-1:exon
so has part: feature:1520249-1520483:-1:exon
so has part: feature:1519486-1519554:-1:exon
so has part: feature:1519305-1519385:-1:exon
so has part: feature:1518515-1518644:-1:exon
so has part: feature:1518266-1518429:-1:exon
so has part: feature:1517981-1518082:-1:exon
so has part: feature:1517662-1517754:-1:exon
so has part: feature:1517392-1517515:-1:exon
so has part: feature:1515329-1516523:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1535002-1535107:-1:exon

position:1535002:-1
position: 1535002
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1528258-1528341:-1:exon

position:1528258:-1
position: 1528258
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1528341:-1
position: 1528341
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1527935-1528018:-1:exon

position:1527935:-1
position: 1527935
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1528018:-1
position: 1528018
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1527749-1527822:-1:exon

position:1527749:-1
position: 1527749
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1527822:-1
position: 1527822
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1527150-1527233:-1:exon

position:1527150:-1
position: 1527150
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1527233:-1
position: 1527233
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1526806-1526937:-1:exon

position:1526806:-1
position: 1526806
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1526937:-1
position: 1526937
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1525613-1525721:-1:exon

position:1525613:-1
position: 1525613
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1525721:-1
position: 1525721
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1525232-1525308:-1:exon

position:1525232:-1
position: 1525232
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1525308:-1
position: 1525308
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:1525057-1525150:-1:exon

position:1525057:-1
position: 1525057
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1525150:-1
position: 1525150
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:1524670-1524744:-1:exon

position:1524670:-1
position: 1524670
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1524744:-1
position: 1524744
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:1524102-1524212:-1:exon

position:1524102:-1
position: 1524102
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1524212:-1
position: 1524212
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:1523607-1523756:-1:exon

position:1523607:-1
position: 1523607
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1523756:-1
position: 1523756
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:1523405-1523506:-1:exon

position:1523405:-1
position: 1523405
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1523506:-1
position: 1523506
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:1523106-1523325:-1:exon

position:1523106:-1
position: 1523106
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1523325:-1
position: 1523325
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:1522866-1522919:-1:exon

position:1522866:-1
position: 1522866
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1522919:-1
position: 1522919
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:1522405-1522526:-1:exon

position:1522405:-1
position: 1522405
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1522526:-1
position: 1522526
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:1521636-1521838:-1:exon

position:1521636:-1
position: 1521636
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1521838:-1
position: 1521838
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:1520249-1520483:-1:exon

position:1520249:-1
position: 1520249
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1520483:-1
position: 1520483
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:1519486-1519554:-1:exon

position:1519486:-1
position: 1519486
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1519554:-1
position: 1519554
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:1519305-1519385:-1:exon

position:1519305:-1
position: 1519305
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1519385:-1
position: 1519385
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:1518515-1518644:-1:exon

position:1518515:-1
position: 1518515
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1518644:-1
position: 1518644
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 22
SIO_000628: feature:1518266-1518429:-1:exon

position:1518266:-1
position: 1518266
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1518429:-1
position: 1518429
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 23
SIO_000628: feature:1517981-1518082:-1:exon

position:1517981:-1
position: 1517981
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1518082:-1
position: 1518082
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 24
SIO_000628: feature:1517662-1517754:-1:exon

position:1517662:-1
position: 1517662
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1517754:-1
position: 1517754
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 25
SIO_000628: feature:1517392-1517515:-1:exon

position:1517392:-1
position: 1517392
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1517515:-1
position: 1517515
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 26
SIO_000628: feature:1515329-1516523:-1:exon

position:1516523:-1
position: 1516523
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

FMNL1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 87175
gene: FMNL1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: formin-like protein 1
translation: MPGNAELEERFGRVLNSMNLPPDKMKLLSQYDNEKKWELICDQERFQVKNPPSAYIQKLKSYLDTGGVSRKFKRRVQESTQVLRELEISLRTNYIGWVQEFLNEENKGLDVLLEYLAFAQCSVAYDMESSENSPGSDKGKERSLEDLNRSTSSSPTQGASKPRPLTVRLNPSHSRKTLRNSRLVSQKDDVHVCIMCLRAIMNYQSGFSLVMNHPACVNEITLSLNNKSARTKALVLELLAAVCLVRGGHDIILAAFDNFKEVCGEKNRFEKLMEYFRNEDTNIDFMVACMQFINIVVHSVENMNFRVFLQYEFTHLGLDQYLETLRLTESDKLQVQIQAYLDNVFDVGAMLEDSETKTAVLEHMEELQEHVSQLTEKLQDAENDSMAKIAELEKQLSQARRELEALREQLSPPRPPSPPCPQPQECYRLALERRLAELEEKGLVQILRGPDGDVAIEIVPVVIETPATPVVSGDTTPTCADAPALAPVPPPPPPPPRLLKVKKPIQTKFRMPVFNWVALKPSQIDGTVFTELNDEKVLQELDMSDFEEQFKTKAQGPALDISALKAKATQKAPSKVTLMESNRAKNLAITLRKGGRSVQDICTAIETYDQQALSLDFLELLLRFLPTEYERSLIGKFEREQQPPEELSDEDQFMMRFSKIPRLAERMNVMIFLGSFGDTAQLLMPQLNAIIAASMSLKSSSKLRHILEIVLAFGNYMNSSKRGAAYGFRLQSLDALLEMKSTDRKQTLLHYLVRVIMEKYPELTGFHTELHFLDKAGTVSLDGVLQDVRSLQQGMELTRREFMRQDDSPVLKDFLKVNSEVMEKLQADSKTAKEAYESAVEYFGENPKTSPPTTFFPMFMRFIKAYKKAEQDIELWKKQEAAAKEAESGSPGSEQQPELPVQKARRQQMDMIAELKKRQMVKEPLIYEGKDGAIEDIISDLRNNPYRRGDKARGSAKKRAAGQSLQATPDIAL
SIO_010081: FMNL1
subclass of: SO_0000673
so part of: FMNL1
location: complement(join(1516420..1516523,1517392..1517515,1517662..1517754,1517981..1518082,1518266..1518429,1518515..1518644,1519305..1519385,1519486..1519554,1520249..1520483,1521636..1521838,1522405..1522526,1522866..1522919,1523106..1523325,1523405..1523506,1523607..1523756,1524102..1524212,1524670..1524744,1525057..1525150,1525232..1525308,1525613..1525721,1526806..1526937,1527150..1527233,1527749..1527822,1527935..1528018,1528258..1528341,1535002..1535046))
location: region:1516420-1535046:-1
so has part: feature:1535002-1535046:-1:exon
so has part: feature:1528258-1528341:-1:exon
so has part: feature:1527935-1528018:-1:exon
so has part: feature:1527749-1527822:-1:exon
so has part: feature:1527150-1527233:-1:exon
so has part: feature:1526806-1526937:-1:exon
so has part: feature:1525613-1525721:-1:exon
so has part: feature:1525232-1525308:-1:exon
so has part: feature:1525057-1525150:-1:exon
so has part: feature:1524670-1524744:-1:exon
so has part: feature:1524102-1524212:-1:exon
so has part: feature:1523607-1523756:-1:exon
so has part: feature:1523405-1523506:-1:exon
so has part: feature:1523106-1523325:-1:exon
so has part: feature:1522866-1522919:-1:exon
so has part: feature:1522405-1522526:-1:exon
so has part: feature:1521636-1521838:-1:exon
so has part: feature:1520249-1520483:-1:exon
so has part: feature:1519486-1519554:-1:exon
so has part: feature:1519305-1519385:-1:exon
so has part: feature:1518515-1518644:-1:exon
so has part: feature:1518266-1518429:-1:exon
so has part: feature:1517981-1518082:-1:exon
so has part: feature:1517662-1517754:-1:exon
so has part: feature:1517392-1517515:-1:exon
so has part: feature:1516420-1516523:-1:exon

XP_030821861.1
type: Protein
SIO_000068: ncbiprotein

position:1516420:-1
position: 1516420
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1535046:-1
position: 1535046
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1535002-1535046:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1528258-1528341:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1527935-1528018:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1527749-1527822:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1527150-1527233:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1526806-1526937:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1525613-1525721:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1525232-1525308:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1525057-1525150:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1524670-1524744:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1524102-1524212:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1523607-1523756:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1523405-1523506:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1523106-1523325:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1522866-1522919:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1522405-1522526:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1521636-1521838:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:1520249-1520483:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:1519486-1519554:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:1519305-1519385:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:1518515-1518644:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:1518266-1518429:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:1517981-1518082:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:1517662-1517754:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:1517392-1517515:-1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:1516420-1516523:-1:exon

LOC115913776
type: Gene
subclass of: SO_0000704
RO_0002162: 87175
gene: LOC115913776
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1543254..1548530)
location: region:1543254-1548530:-1
so has part: feature:1543254-1548530:-1:exon
subclass of: SO_0000010

115913776
type: Gene
SIO_000068: ncbigene

position:1543254:-1
position: 1543254
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1548530:-1
position: 1548530
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1543254-1548530:-1:exon

LOC115913776
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 87175
gene: LOC115913776
product: myosin light chain kinase, smooth muscle-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 38% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_030966003.1
SIO_010081: LOC115913776
subclass of: SO_0000673
so part of: LOC115913776
location: complement(join(1543254..1543378,1543666..1543756,1544066..1544186,1544310..1544462,1544541..1544658,1546413..1546636,1547248..1547451,1547554..1547644,1547977..1548132,1548450..1548530))
location: region:1543254-1548530:-1
so has part: feature:1548450-1548530:-1:exon
so has part: feature:1547977-1548132:-1:exon
so has part: feature:1547554-1547644:-1:exon
so has part: feature:1547248-1547451:-1:exon
so has part: feature:1546413-1546636:-1:exon
so has part: feature:1544541-1544658:-1:exon
so has part: feature:1544310-1544462:-1:exon
so has part: feature:1544066-1544186:-1:exon
so has part: feature:1543666-1543756:-1:exon
so has part: feature:1543254-1543378:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1548450-1548530:-1:exon

position:1548450:-1
position: 1548450
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1547977-1548132:-1:exon

position:1547977:-1
position: 1547977
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1548132:-1
position: 1548132
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1547554-1547644:-1:exon

position:1547554:-1
position: 1547554
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1547644:-1
position: 1547644
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1547248-1547451:-1:exon

position:1547248:-1
position: 1547248
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1547451:-1
position: 1547451
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1546413-1546636:-1:exon

position:1546413:-1
position: 1546413
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1546636:-1
position: 1546636
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1544541-1544658:-1:exon

position:1544541:-1
position: 1544541
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1544658:-1
position: 1544658
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1544310-1544462:-1:exon

position:1544310:-1
position: 1544310
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1544462:-1
position: 1544462
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1544066-1544186:-1:exon

position:1544066:-1
position: 1544066
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1544186:-1
position: 1544186
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:1543666-1543756:-1:exon

position:1543666:-1
position: 1543666
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1543756:-1
position: 1543756
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:1543254-1543378:-1:exon

position:1543378:-1
position: 1543378
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC115913776
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 87175
gene: LOC115913776
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: myosin light chain kinase, smooth muscle-like
translation: MSQAGGAEEAFEHRDVVINSQDKVSDVYTQLEKLGEGKFGTVYRLQEKATGRIRAGKYFRARTAKERQAARAEVELMNLLHHPCLVQCLEAFQEPTQLVMVMEYVAGGELFERIVDDDFEHTEPSSARYMQQILEGLQFMHGQAIVHLDLKPENIVCVSPGSHRVKIIDFGLAWRLSEHSPVKVLHGTPEFMAPEVVAFEPVSFSTDMWSVGVICYILLSGESPFQGDTDMETLSNVTAAQWDFEEETFSEISQQAKDFISQLLQKEPSRRLPSAGALLHPWLQQPQPSSPKVLNKERIRQFLARRKWQKTGKALLALKRLTLLSQSLEGKASEAQDEEGLEKEQPCRALPQRGASPSDLLPDPEEEEEEDGGSAAASGQ
SIO_010081: LOC115913776
subclass of: SO_0000673
so part of: LOC115913776
location: complement(join(1543254..1543378,1543666..1543756,1544066..1544186,1544310..1544462,1544541..1544658,1546413..1546636,1547248..1547451,1547554..1547644,1547977..1547992))
location: region:1543254-1547992:-1
so has part: feature:1547977-1547992:-1:exon
so has part: feature:1547554-1547644:-1:exon
so has part: feature:1547248-1547451:-1:exon
so has part: feature:1546413-1546636:-1:exon
so has part: feature:1544541-1544658:-1:exon
so has part: feature:1544310-1544462:-1:exon
so has part: feature:1544066-1544186:-1:exon
so has part: feature:1543666-1543756:-1:exon
so has part: feature:1543254-1543378:-1:exon

XP_030821863.1
type: Protein
SIO_000068: ncbiprotein

position:1547992:-1
position: 1547992
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1547977-1547992:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1547554-1547644:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1547248-1547451:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1546413-1546636:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1544541-1544658:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1544310-1544462:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1544066-1544186:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1543666-1543756:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1543254-1543378:-1:exon

HEXIM1
type: Gene
subclass of: SO_0000704
RO_0002162: 87175
gene: HEXIM1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1559813..1561224)
location: region:1559813-1561224:-1
so has part: feature:1559813-1561224:-1:exon
subclass of: SO_0000010

115914110
type: Gene
SIO_000068: ncbigene

position:1559813:-1
position: 1559813
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1561224:-1
position: 1561224
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1559813-1561224:-1:exon

HEXIM1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 87175
gene: HEXIM1
product: HEXIM P-TEFb complex subunit 1
exception: unclassified transcription discrepancy
note: The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: inserted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 14 ESTs, 5 Proteins, and 98% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_030966464.1
SIO_010081: HEXIM1
subclass of: SO_0000673
so part of: HEXIM1
location: complement(1559813..1561224)
location: region:1559813-1561224:-1
so has part: feature:1559813-1561224:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1559813-1561224:-1:exon

HEXIM1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 87175
gene: HEXIM1
exception: unclassified translation discrepancy
note: The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: inserted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: LOW QUALITY PROTEIN: protein HEXIM1
translation: MADTAPAEPGPEPQCEAEPRSEPEARPEPQSEPEPQPERGEAPTEDGDAGRLPPPXAEAAAGGAEGRPPAGGAGRPGLGPRYRAVGRTEEWPVKKKHRRRPSKKKRRWKPYSKLSWEEKQQFDERQSLRASRLRAEMFAKGQPVAPYNTTQFLMEDHDQEEPDLKTGLYPRRAAAKSDDTSEEDFLDDAADEDGGSDGMGGDGSEFLQRDFSETYERYHVESLQNMSKQELVKEYLELEKCLSRMEEENNRLRMESKKAGGEAADPARVQALEREVDRLRAENLRLLREQELPRQEKGPCKPGE
SIO_010081: HEXIM1
subclass of: SO_0000673
so part of: HEXIM1
location: complement(1560126..1561039)
location: region:1560126-1561039:-1
so has part: feature:1560126-1561039:-1:exon

XP_030822324.1
type: Protein
SIO_000068: ncbiprotein

position:1560126:-1
position: 1560126
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1561039:-1
position: 1561039
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1560126-1561039:-1:exon

ACBD4
type: Gene
subclass of: SO_0000704
RO_0002162: 87175
gene: ACBD4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1562220..1569457)
location: region:1562220-1569457:-1
so has part: feature:1562220-1569457:-1:exon
subclass of: SO_0000010

115914054
type: Gene
SIO_000068: ncbigene

position:1562220:-1
position: 1562220
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1569457:-1
position: 1569457
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1562220-1569457:-1:exon

ACBD4
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 87175
gene: ACBD4
product: acyl-CoA binding domain containing 4, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_030966401.1
SIO_010081: ACBD4
subclass of: SO_0000673
so part of: ACBD4
location: complement(join(1562220..1562780,1563032..1563067,1563705..1563847,1565407..1565513,1568192..1568312,1568398..1568482,1569155..1569275,1569344..1569457))
location: region:1562220-1569457:-1
so has part: feature:1569344-1569457:-1:exon
so has part: feature:1569155-1569275:-1:exon
so has part: feature:1568398-1568482:-1:exon
so has part: feature:1568192-1568312:-1:exon
so has part: feature:1565407-1565513:-1:exon
so has part: feature:1563705-1563847:-1:exon
so has part: feature:1563032-1563067:-1:exon
so has part: feature:1562220-1562780:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1569344-1569457:-1:exon

position:1569344:-1
position: 1569344
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1569155-1569275:-1:exon

position:1569155:-1
position: 1569155
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1569275:-1
position: 1569275
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1568398-1568482:-1:exon

position:1568398:-1
position: 1568398
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1568482:-1
position: 1568482
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1568192-1568312:-1:exon

position:1568192:-1
position: 1568192
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1568312:-1
position: 1568312
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1565407-1565513:-1:exon

position:1565407:-1
position: 1565407
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1565513:-1
position: 1565513
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1563705-1563847:-1:exon

position:1563705:-1
position: 1563705
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1563847:-1
position: 1563847
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1563032-1563067:-1:exon

position:1563032:-1
position: 1563032
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1563067:-1
position: 1563067
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1562220-1562780:-1:exon

position:1562780:-1
position: 1562780
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

ACBD4
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 87175
gene: ACBD4
product: acyl-CoA binding domain containing 4, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_030966399.1
SIO_010081: ACBD4
subclass of: SO_0000673
so part of: ACBD4
location: complement(join(1562220..1562780,1563032..1563067,1563705..1563847,1565407..1565513,1566404..1566505,1568192..1568312,1568398..1568482,1569155..1569275,1569344..1569457))
location: region:1562220-1569457:-1
so has part: feature:1569344-1569457:-1:exon
so has part: feature:1569155-1569275:-1:exon
so has part: feature:1568398-1568482:-1:exon
so has part: feature:1568192-1568312:-1:exon
so has part: feature:1566404-1566505:-1:exon
so has part: feature:1565407-1565513:-1:exon
so has part: feature:1563705-1563847:-1:exon
so has part: feature:1563032-1563067:-1:exon
so has part: feature:1562220-1562780:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1569344-1569457:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1569155-1569275:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1568398-1568482:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1568192-1568312:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1566404-1566505:-1:exon

position:1566404:-1
position: 1566404
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1566505:-1
position: 1566505
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1565407-1565513:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1563705-1563847:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1563032-1563067:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1562220-1562780:-1:exon

ACBD4
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 87175
gene: ACBD4
product: acyl-CoA binding domain containing 4, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XM_030966402.1
SIO_010081: ACBD4
subclass of: SO_0000673
so part of: ACBD4
location: complement(join(1562254..1562780,1563032..1563067,1564775..1564925,1565407..1565513,1568192..1568312,1568398..1568482,1569155..1569275,1569344..1569457))
location: region:1562254-1569457:-1
so has part: feature:1569344-1569457:-1:exon
so has part: feature:1569155-1569275:-1:exon
so has part: feature:1568398-1568482:-1:exon
so has part: feature:1568192-1568312:-1:exon
so has part: feature:1565407-1565513:-1:exon
so has part: feature:1564775-1564925:-1:exon
so has part: feature:1563032-1563067:-1:exon
so has part: feature:1562254-1562780:-1:exon

position:1562254:-1
position: 1562254
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1569344-1569457:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1569155-1569275:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1568398-1568482:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1568192-1568312:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1565407-1565513:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1564775-1564925:-1:exon

position:1564775:-1
position: 1564775
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1564925:-1
position: 1564925
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1563032-1563067:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1562254-1562780:-1:exon

ACBD4
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 87175
gene: ACBD4
product: acyl-CoA binding domain containing 4, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XM_030966400.1
SIO_010081: ACBD4
subclass of: SO_0000673
so part of: ACBD4
location: complement(join(1562254..1562780,1563032..1563067,1564775..1564925,1565407..1565513,1566404..1566505,1568192..1568312,1568398..1568482,1569155..1569275,1569344..1569457))
location: region:1562254-1569457:-1
so has part: feature:1569344-1569457:-1:exon
so has part: feature:1569155-1569275:-1:exon
so has part: feature:1568398-1568482:-1:exon
so has part: feature:1568192-1568312:-1:exon
so has part: feature:1566404-1566505:-1:exon
so has part: feature:1565407-1565513:-1:exon
so has part: feature:1564775-1564925:-1:exon
so has part: feature:1563032-1563067:-1:exon
so has part: feature:1562254-1562780:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1569344-1569457:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1569155-1569275:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1568398-1568482:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1568192-1568312:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1566404-1566505:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1565407-1565513:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1564775-1564925:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1563032-1563067:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1562254-1562780:-1:exon

ACBD4
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 87175
gene: ACBD4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: acyl-CoA-binding domain-containing protein 4 isoform X3
translation: MEEPGCGAQFRAAVQVIQGLPRSGAYRPSYEEMLRFYSYYKQATAGRCQGPRPGFWDPIGRYKWDAWHSLGAMSKQEAMAAYVAEMKKVAQKVIDTVPMDESTQEMFRYFEPLYEVIHDMPRPPEAFFRSTGGPGLAPAPEALEGTQVTSDSDGDTFSDTLEQMEPEKMCGCPGAAAPSQRRSWRRTWPARCGRCRRSCGGCGSGSAAWRRSGLPRGRQTPAWHSLHRPCPGGACPCPHARCSSWPPGPSSPSGCCATGRAGRGDPRAPAPPALLAIPLRTEPCGNRLSSHRDTGTGRHSGPAPTPRRRRHAQPEQEQPRARPGLTGDITEPASIKVAFSVQPRCLCHAARGGEGPSLSPRPGAMPTLRVPPGPVREAAVGKPQGSPGPP
SIO_010081: ACBD4
subclass of: SO_0000673
so part of: ACBD4
location: complement(join(1562291..1562780,1563032..1563067,1563705..1563847,1565407..1565513,1568192..1568312,1568398..1568482,1569155..1569275,1569344..1569413))
location: region:1562291-1569413:-1
so has part: feature:1569344-1569413:-1:exon
so has part: feature:1569155-1569275:-1:exon
so has part: feature:1568398-1568482:-1:exon
so has part: feature:1568192-1568312:-1:exon
so has part: feature:1565407-1565513:-1:exon
so has part: feature:1563705-1563847:-1:exon
so has part: feature:1563032-1563067:-1:exon
so has part: feature:1562291-1562780:-1:exon

XP_030822261.1
type: Protein
SIO_000068: ncbiprotein

position:1562291:-1
position: 1562291
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1569413:-1
position: 1569413
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1569344-1569413:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1569155-1569275:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1568398-1568482:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1568192-1568312:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1565407-1565513:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1563705-1563847:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1563032-1563067:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1562291-1562780:-1:exon

ACBD4
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 87175
gene: ACBD4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: acyl-CoA-binding domain-containing protein 4 isoform X1
translation: MEEPGCGAQFRAAVQVIQGLPRSGAYRPSYEEMLRFYSYYKQATAGRCQGPRPGFWDPIGRYKWDAWHSLGAMSKQEAMAAYVAEMKKVAQKVIDTVPMDESTQEMFRYFEPLYEVIHDMPRPPEAFFRSTGESQGQQDGPSQDVPASSPAPESPRDAVPGQQHVPGPGLAPAPEALEGTQVTSDSDGDTFSDTLEQMEPEKMCGCPGAAAPSQRRSWRRTWPARCGRCRRSCGGCGSGSAAWRRSGLPRGRQTPAWHSLHRPCPGGACPCPHARCSSWPPGPSSPSGCCATGRAGRGDPRAPAPPALLAIPLRTEPCGNRLSSHRDTGTGRHSGPAPTPRRRRHAQPEQEQPRARPGLTGDITEPASIKVAFSVQPRCLCHAARGGEGPSLSPRPGAMPTLRVPPGPVREAAVGKPQGSPGPP
SIO_010081: ACBD4
subclass of: SO_0000673
so part of: ACBD4
location: complement(join(1562291..1562780,1563032..1563067,1563705..1563847,1565407..1565513,1566404..1566505,1568192..1568312,1568398..1568482,1569155..1569275,1569344..1569413))
location: region:1562291-1569413:-1
so has part: feature:1569344-1569413:-1:exon
so has part: feature:1569155-1569275:-1:exon
so has part: feature:1568398-1568482:-1:exon
so has part: feature:1568192-1568312:-1:exon
so has part: feature:1566404-1566505:-1:exon
so has part: feature:1565407-1565513:-1:exon
so has part: feature:1563705-1563847:-1:exon
so has part: feature:1563032-1563067:-1:exon
so has part: feature:1562291-1562780:-1:exon

XP_030822259.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1569344-1569413:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1569155-1569275:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1568398-1568482:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1568192-1568312:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1566404-1566505:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1565407-1565513:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1563705-1563847:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1563032-1563067:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1562291-1562780:-1:exon

ACBD4
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 87175
gene: ACBD4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: acyl-CoA-binding domain-containing protein 4 isoform X4
translation: MEEPGCGAQFRAAVQVIQGLPRSGAYRPSYEEMLRFYSYYKQATAGRCQGPRPGFWDPIGRYKWDAWHSLGAMSKQEAMAAYVAEMKKVAQKVIDTVPMDESTQEMFRYFEPLYEVIHDMPRPPEAFFRSTGGPGLAPAPEALEGTQVTSDSDGDTFSDTLEQMEPEKAGQVRGLTPKSPQAGAEPPEPLSAGQGERGEGRRAEGSSSTDLPALGSNTGGDRPRPGTRSTGRVPVAPARVPTHAALPGHLALRHPVAAAPLAGQEEVTPEHRHRQPSSPSRFARSHAGTASAATGTPAPADTQGQPRPRAAAATHSRSRSSPGPGPASPGTSPSLPQLKSHFRFSPAACAMLPGEGKAPACPPGRVPCPP
SIO_010081: ACBD4
subclass of: SO_0000673
so part of: ACBD4
location: complement(join(1562359..1562780,1563032..1563067,1564775..1564925,1565407..1565513,1568192..1568312,1568398..1568482,1569155..1569275,1569344..1569413))
location: region:1562359-1569413:-1
so has part: feature:1569344-1569413:-1:exon
so has part: feature:1569155-1569275:-1:exon
so has part: feature:1568398-1568482:-1:exon
so has part: feature:1568192-1568312:-1:exon
so has part: feature:1565407-1565513:-1:exon
so has part: feature:1564775-1564925:-1:exon
so has part: feature:1563032-1563067:-1:exon
so has part: feature:1562359-1562780:-1:exon

XP_030822262.1
type: Protein
SIO_000068: ncbiprotein

position:1562359:-1
position: 1562359
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1569344-1569413:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1569155-1569275:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1568398-1568482:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1568192-1568312:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1565407-1565513:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1564775-1564925:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1563032-1563067:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1562359-1562780:-1:exon

ACBD4
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 87175
gene: ACBD4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: acyl-CoA-binding domain-containing protein 4 isoform X2
translation: MEEPGCGAQFRAAVQVIQGLPRSGAYRPSYEEMLRFYSYYKQATAGRCQGPRPGFWDPIGRYKWDAWHSLGAMSKQEAMAAYVAEMKKVAQKVIDTVPMDESTQEMFRYFEPLYEVIHDMPRPPEAFFRSTGESQGQQDGPSQDVPASSPAPESPRDAVPGQQHVPGPGLAPAPEALEGTQVTSDSDGDTFSDTLEQMEPEKAGQVRGLTPKSPQAGAEPPEPLSAGQGERGEGRRAEGSSSTDLPALGSNTGGDRPRPGTRSTGRVPVAPARVPTHAALPGHLALRHPVAAAPLAGQEEVTPEHRHRQPSSPSRFARSHAGTASAATGTPAPADTQGQPRPRAAAATHSRSRSSPGPGPASPGTSPSLPQLKSHFRFSPAACAMLPGEGKAPACPPGRVPCPP
SIO_010081: ACBD4
subclass of: SO_0000673
so part of: ACBD4
location: complement(join(1562359..1562780,1563032..1563067,1564775..1564925,1565407..1565513,1566404..1566505,1568192..1568312,1568398..1568482,1569155..1569275,1569344..1569413))
location: region:1562359-1569413:-1
so has part: feature:1569344-1569413:-1:exon
so has part: feature:1569155-1569275:-1:exon
so has part: feature:1568398-1568482:-1:exon
so has part: feature:1568192-1568312:-1:exon
so has part: feature:1566404-1566505:-1:exon
so has part: feature:1565407-1565513:-1:exon
so has part: feature:1564775-1564925:-1:exon
so has part: feature:1563032-1563067:-1:exon
so has part: feature:1562359-1562780:-1:exon

XP_030822260.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1569344-1569413:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1569155-1569275:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1568398-1568482:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1568192-1568312:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1566404-1566505:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1565407-1565513:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1564775-1564925:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1563032-1563067:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1562359-1562780:-1:exon

ACBD4
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 87175
gene: ACBD4
product: acyl-CoA binding domain containing 4, transcript variant X5
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_030966404.1
SIO_010081: ACBD4
subclass of: SO_0000673
so part of: ACBD4
location: complement(join(1562539..1562780,1563032..1563067,1563705..1563847,1564775..1564925,1565407..1565513,1566404..1566505,1568192..1568312,1568398..1568482,1569155..1569275,1569344..1569457))
location: region:1562539-1569457:-1
so has part: feature:1569344-1569457:-1:exon
so has part: feature:1569155-1569275:-1:exon
so has part: feature:1568398-1568482:-1:exon
so has part: feature:1568192-1568312:-1:exon
so has part: feature:1566404-1566505:-1:exon
so has part: feature:1565407-1565513:-1:exon
so has part: feature:1564775-1564925:-1:exon
so has part: feature:1563705-1563847:-1:exon
so has part: feature:1563032-1563067:-1:exon
so has part: feature:1562539-1562780:-1:exon

position:1562539:-1
position: 1562539
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1569344-1569457:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1569155-1569275:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1568398-1568482:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1568192-1568312:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1566404-1566505:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1565407-1565513:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1564775-1564925:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1563705-1563847:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1563032-1563067:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1562539-1562780:-1:exon

ACBD4
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 87175
gene: ACBD4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: acyl-CoA-binding domain-containing protein 4 isoform X5
translation: MEEPGCGAQFRAAVQVIQGLPRSGAYRPSYEEMLRFYSYYKQATAGRCQGPRPGFWDPIGRYKWDAWHSLGAMSKQEAMAAYVAEMKKVAQKVIDTVPMDESTQEMFRYFEPLYEVIHDMPRPPEAFFRSTGESQGQQDGPSQDVPASSPAPESPRDAVPGQQHVPGPGLAPAPEALEGTQVTSDSDGDTFSDTLEQMEPEKAGQVRGLTPKSPQAGAEPPEPLSAGQGERGEGRRAEGSSSTDLPALGSNTDVRLPGGSSPEPAAELEAHVAGAVRALQEELRRVRERLSRLEALGAAQGETDPGLALAPQAVSRWRLPVSPRTLLFLATWPFVTQWLLRHWQGRKR
SIO_010081: ACBD4
subclass of: SO_0000673
so part of: ACBD4
location: complement(join(1562670..1562780,1563032..1563067,1563705..1563847,1564775..1564925,1565407..1565513,1566404..1566505,1568192..1568312,1568398..1568482,1569155..1569275,1569344..1569413))
location: region:1562670-1569413:-1
so has part: feature:1569344-1569413:-1:exon
so has part: feature:1569155-1569275:-1:exon
so has part: feature:1568398-1568482:-1:exon
so has part: feature:1568192-1568312:-1:exon
so has part: feature:1566404-1566505:-1:exon
so has part: feature:1565407-1565513:-1:exon
so has part: feature:1564775-1564925:-1:exon
so has part: feature:1563705-1563847:-1:exon
so has part: feature:1563032-1563067:-1:exon
so has part: feature:1562670-1562780:-1:exon

XP_030822264.1
type: Protein
SIO_000068: ncbiprotein

position:1562670:-1
position: 1562670
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1569344-1569413:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1569155-1569275:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1568398-1568482:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1568192-1568312:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1566404-1566505:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1565407-1565513:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1564775-1564925:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1563705-1563847:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1563032-1563067:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1562670-1562780:-1:exon

PLCD3
type: Gene
subclass of: SO_0000704
RO_0002162: 87175
gene: PLCD3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1574327..1587428
location: region:1574327-1587428:1
so has part: feature:1574327-1587428:1:exon
subclass of: SO_0000010

115914064
type: Gene
SIO_000068: ncbigene

position:1574327:1
position: 1574327
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1587428:1
position: 1587428
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1574327-1587428:1:exon

PLCD3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 87175
gene: PLCD3
product: phospholipase C delta 3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 12 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_030966416.1
SIO_010081: PLCD3
subclass of: SO_0000673
so part of: PLCD3
location: join(1574327..1574590,1577050..1577211,1578838..1579066,1579748..1579877,1580719..1580944,1581638..1581839,1582414..1582558,1582718..1582870,1582945..1583097,1583250..1583285,1584045..1584204,1584917..1585033,1585116..1585264,1586101..1586236,1586692..1586841,1586922..1587428)
location: region:1574327-1587428:1
so has part: feature:1574327-1574590:1:exon
so has part: feature:1577050-1577211:1:exon
so has part: feature:1578838-1579066:1:exon
so has part: feature:1579748-1579877:1:exon
so has part: feature:1580719-1580944:1:exon
so has part: feature:1581638-1581839:1:exon
so has part: feature:1582414-1582558:1:exon
so has part: feature:1582718-1582870:1:exon
so has part: feature:1582945-1583097:1:exon
so has part: feature:1583250-1583285:1:exon
so has part: feature:1584045-1584204:1:exon
so has part: feature:1584917-1585033:1:exon
so has part: feature:1585116-1585264:1:exon
so has part: feature:1586101-1586236:1:exon
so has part: feature:1586692-1586841:1:exon
so has part: feature:1586922-1587428:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1574327-1574590:1:exon

position:1574590:1
position: 1574590
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1577050-1577211:1:exon

position:1577050:1
position: 1577050
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1577211:1
position: 1577211
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1578838-1579066:1:exon

position:1578838:1
position: 1578838
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1579066:1
position: 1579066
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1579748-1579877:1:exon

position:1579748:1
position: 1579748
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1579877:1
position: 1579877
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1580719-1580944:1:exon

position:1580719:1
position: 1580719
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1580944:1
position: 1580944
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1581638-1581839:1:exon

position:1581638:1
position: 1581638
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1581839:1
position: 1581839
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1582414-1582558:1:exon

position:1582414:1
position: 1582414
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1582558:1
position: 1582558
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1582718-1582870:1:exon

position:1582718:1
position: 1582718
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1582870:1
position: 1582870
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:1582945-1583097:1:exon

position:1582945:1
position: 1582945
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1583097:1
position: 1583097
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:1583250-1583285:1:exon

position:1583250:1
position: 1583250
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1583285:1
position: 1583285
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:1584045-1584204:1:exon

position:1584045:1
position: 1584045
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1584204:1
position: 1584204
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:1584917-1585033:1:exon

position:1584917:1
position: 1584917
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1585033:1
position: 1585033
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:1585116-1585264:1:exon

position:1585116:1
position: 1585116
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1585264:1
position: 1585264
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:1586101-1586236:1:exon

position:1586101:1
position: 1586101
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1586236:1
position: 1586236
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:1586692-1586841:1:exon

position:1586692:1
position: 1586692
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1586841:1
position: 1586841
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:1586922-1587428:1:exon

position:1586922:1
position: 1586922
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

PLCD3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 87175
gene: PLCD3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: 1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase delta-3
translation: MICGRRARPAPEQLRAPSEGAGGSRRPGRALKKMGLTEDEDVQRMLQGSLLWKVKARGGSRARLFRLQEDGVTVCFEGRFRHARAPRSFSVALVEAVRKGRRSEGLRKHGAAFPERHCFSLAFKGRRKNLDLAARGEEDARHWVQGLGKLMGRLQAMSQMEKLDHWIHGVLQRADRNKDNKMSFREVKSMLRMLNIDMDDVYASKLFKECDHSGNERLEGRELEEFCRRLLRRPELEELFGRYSGEDRVLSAEELQDFLRDQGEESSLRQARAIIRTHELNDKAKQQDLMMLDGFMMYLLSPAGDILNQEHTKVHQDMSQPLSHYFISSSHNTYLTRNQVGGSSSTEAYVRALRAGCRCVELDCWEGPDGEPVVYHGHTLTSKILFRDVIESIRDSAFEKSPYPVILSLENHCGLEQQATMARHMKAILGDRLLTQPLQGQNPHDLPSPEQLKGKILVKGKKLPELWQEPRGVTSLLDPEEEEEEEEEEEEEKVQERSPRRSLQSLQEIKPLQAKDASQVSPELSALVIYCQAVPFPGLAQALRHPQPCHVSSFSERKARKLIKEAGPALVRYNARQLSRVYPLGLKMNSANYNPQEMWNAGCQLVALNFQTPGYEMDLNAGRFLPNGRCGYVLKPPCLHSPRGEGSRRLALHIRVITAQQLPKLNRDKGSSIVDPFVRVEIHGVPADCAKQQTHHKLNNGFNPRWEETLRFQVRVPELALVRFVVEDYDSTSCNDFVGQFTLPLPSMRQGYRHIHLLSKDGASLAPATLFVHVRAKSL
SIO_010081: PLCD3
subclass of: SO_0000673
so part of: PLCD3
location: join(1574488..1574590,1577050..1577211,1578838..1579066,1579748..1579877,1580719..1580944,1581638..1581839,1582414..1582558,1582718..1582870,1582945..1583097,1583250..1583285,1584045..1584204,1584917..1585033,1585116..1585264,1586101..1586236,1586692..1586841,1586922..1587010)
location: region:1574488-1587010:1
so has part: feature:1574488-1574590:1:exon
so has part: feature:1577050-1577211:1:exon
so has part: feature:1578838-1579066:1:exon
so has part: feature:1579748-1579877:1:exon
so has part: feature:1580719-1580944:1:exon
so has part: feature:1581638-1581839:1:exon
so has part: feature:1582414-1582558:1:exon
so has part: feature:1582718-1582870:1:exon
so has part: feature:1582945-1583097:1:exon
so has part: feature:1583250-1583285:1:exon
so has part: feature:1584045-1584204:1:exon
so has part: feature:1584917-1585033:1:exon
so has part: feature:1585116-1585264:1:exon
so has part: feature:1586101-1586236:1:exon
so has part: feature:1586692-1586841:1:exon
so has part: feature:1586922-1587010:1:exon

XP_030822276.1
type: Protein
SIO_000068: ncbiprotein

position:1574488:1
position: 1574488
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1587010:1
position: 1587010
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1574488-1574590:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1577050-1577211:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1578838-1579066:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1579748-1579877:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1580719-1580944:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1581638-1581839:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1582414-1582558:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1582718-1582870:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1582945-1583097:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1583250-1583285:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1584045-1584204:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1584917-1585033:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1585116-1585264:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1586101-1586236:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1586692-1586841:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1586922-1587010:1:exon

NMT1
type: Gene
subclass of: SO_0000704
RO_0002162: 87175
gene: NMT1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1588501..1609751)
location: region:1588501-1609751:-1
so has part: feature:1588501-1609751:-1:exon
subclass of: SO_0000010

115914065
type: Gene
SIO_000068: ncbigene

position:1588501:-1
position: 1588501
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1609751:-1
position: 1609751
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1588501-1609751:-1:exon

NMT1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 87175
gene: NMT1
product: N-myristoyltransferase 1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 15 ESTs, 7 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
transcript id: XM_030966417.1
SIO_010081: NMT1
subclass of: SO_0000673
so part of: NMT1
location: complement(join(1588501..1588778,1589619..1589756,1590423..1590590,1591517..1591687,1592677..1592785,1594355..1594525,1595261..1595377,1595957..1596048,1596864..1596982,1601123..1601267,1602383..1602497,1609308..1609751))
location: region:1588501-1609751:-1
so has part: feature:1609308-1609751:-1:exon
so has part: feature:1602383-1602497:-1:exon
so has part: feature:1601123-1601267:-1:exon
so has part: feature:1596864-1596982:-1:exon
so has part: feature:1595957-1596048:-1:exon
so has part: feature:1595261-1595377:-1:exon
so has part: feature:1594355-1594525:-1:exon
so has part: feature:1592677-1592785:-1:exon
so has part: feature:1591517-1591687:-1:exon
so has part: feature:1590423-1590590:-1:exon
so has part: feature:1589619-1589756:-1:exon
so has part: feature:1588501-1588778:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1609308-1609751:-1:exon

position:1609308:-1
position: 1609308
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1602383-1602497:-1:exon

position:1602383:-1
position: 1602383
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1602497:-1
position: 1602497
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1601123-1601267:-1:exon

position:1601123:-1
position: 1601123
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1601267:-1
position: 1601267
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1596864-1596982:-1:exon

position:1596864:-1
position: 1596864
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1596982:-1
position: 1596982
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1595957-1596048:-1:exon

position:1595957:-1
position: 1595957
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1596048:-1
position: 1596048
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1595261-1595377:-1:exon

position:1595261:-1
position: 1595261
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1595377:-1
position: 1595377
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1594355-1594525:-1:exon

position:1594355:-1
position: 1594355
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1594525:-1
position: 1594525
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1592677-1592785:-1:exon

position:1592677:-1
position: 1592677
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1592785:-1
position: 1592785
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:1591517-1591687:-1:exon

position:1591517:-1
position: 1591517
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1591687:-1
position: 1591687
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:1590423-1590590:-1:exon

position:1590423:-1
position: 1590423
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1590590:-1
position: 1590590
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:1589619-1589756:-1:exon

position:1589619:-1
position: 1589619
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1589756:-1
position: 1589756
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:1588501-1588778:-1:exon

position:1588778:-1
position: 1588778
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

NMT1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 87175
gene: NMT1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: glycylpeptide N-tetradecanoyltransferase 1
translation: MPHGPPANRGALCCGGAARAEAPFKMADDSETAVRRPPARPSRPAAEENDHEHCSDCENEAEHGSNRGGLSPANDSGAKKKKKKPKRKKEKGGGDQADQAQDQPVKVNSLPAERIQEIQKAIELFSVGQGPAKTMEEASKRSYQFWDTQPVPKLGEVVNTHGPVEPDKDNIRQEPYTLPQGFTWDALDLGDRGVLKELYTLLNENYVEDDDNMFRFDYSPEFLLWALRPPGWLPQWHCGVRVVSSKKLVGFISAIPATIHIYDTEKKMVEINFLCVHKKLRSKRVAPVLIREITRRVHLEGIFQAVYTAGVVLPKPVGTCRYWHRSLNPRKLIEVKFSHLSRNMTMQRTTKLYRLPETPKTPGLRPMEHKDIPAVHKLLTEYLKQFHLTPVMSREEVEHWFVPQENIIDTFVVESAPGEVTDFLSFYTLPSTIMNHPTHKSLKAAYSFYNVHTKTPLIDLMSDALILAKSKGFDVFNALDLMENKTFLEKLKFGIGDGNLQYYLYNWKCPSMAPEKVGLVLQ
SIO_010081: NMT1
subclass of: SO_0000673
so part of: NMT1
location: complement(join(1588758..1588778,1589619..1589756,1590423..1590590,1591517..1591687,1592677..1592785,1594355..1594525,1595261..1595377,1595957..1596048,1596864..1596982,1601123..1601267,1602383..1602497,1609308..1609510))
location: region:1588758-1609510:-1
so has part: feature:1609308-1609510:-1:exon
so has part: feature:1602383-1602497:-1:exon
so has part: feature:1601123-1601267:-1:exon
so has part: feature:1596864-1596982:-1:exon
so has part: feature:1595957-1596048:-1:exon
so has part: feature:1595261-1595377:-1:exon
so has part: feature:1594355-1594525:-1:exon
so has part: feature:1592677-1592785:-1:exon
so has part: feature:1591517-1591687:-1:exon
so has part: feature:1590423-1590590:-1:exon
so has part: feature:1589619-1589756:-1:exon
so has part: feature:1588758-1588778:-1:exon

XP_030822277.1
type: Protein
SIO_000068: ncbiprotein

position:1588758:-1
position: 1588758
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1609510:-1
position: 1609510
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1609308-1609510:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1602383-1602497:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1601123-1601267:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1596864-1596982:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1595957-1596048:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1595261-1595377:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1594355-1594525:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1592677-1592785:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1591517-1591687:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1590423-1590590:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1589619-1589756:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1588758-1588778:-1:exon

DCAKD
type: Gene
subclass of: SO_0000704
RO_0002162: 87175
gene: DCAKD
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1609486..1618661
location: region:1609486-1618661:1
so has part: feature:1609486-1618661:1:exon
subclass of: SO_0000010

115914066
type: Gene
SIO_000068: ncbigene

position:1609486:1
position: 1609486
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1618661:1
position: 1618661
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1609486-1618661:1:exon

DCAKD
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 87175
gene: DCAKD
product: dephospho-CoA kinase domain containing
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 15 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XM_030966418.1
SIO_010081: DCAKD
subclass of: SO_0000673
so part of: DCAKD
location: join(1609486..1609854,1612933..1613053,1614995..1615198,1617130..1617217,1617653..1618661)
location: region:1609486-1618661:1
so has part: feature:1609486-1609854:1:exon
so has part: feature:1612933-1613053:1:exon
so has part: feature:1614995-1615198:1:exon
so has part: feature:1617130-1617217:1:exon
so has part: feature:1617653-1618661:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1609486-1609854:1:exon

position:1609854:1
position: 1609854
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1612933-1613053:1:exon

position:1612933:1
position: 1612933
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1613053:1
position: 1613053
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1614995-1615198:1:exon

position:1614995:1
position: 1614995
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1615198:1
position: 1615198
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1617130-1617217:1:exon

position:1617130:1
position: 1617130
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1617217:1
position: 1617217
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1617653-1618661:1:exon

position:1617653:1
position: 1617653
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

DCAKD
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 87175
gene: DCAKD
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: dephospho-CoA kinase domain-containing protein
translation: MRAALIGWQRRPRFPTANGSEGHCGVGEAGRRLFTMFLVGLSGGIASGKSTVVAVLRELGCAVIDADVIARLVVQPHSKAHQQILQHFGTEILLENGEINREALGSIIFSQPEKRRLLNSITHPEILKEMLKQILKYFVLGYRYVILDIPLLFETRGLTRLMKYTVLVYCDPPTQLARLMKRSGLGVAEAEARISSQLPLEEKRRWATHVIDNSGDWESTRRQVLQLHTRLEDSLDFLWARLVVGTAVAGLGGLVFLLIRHFIS
SIO_010081: DCAKD
subclass of: SO_0000673
so part of: DCAKD
location: join(1609759..1609854,1612933..1613053,1614995..1615198,1617130..1617217,1617653..1617938)
location: region:1609759-1617938:1
so has part: feature:1609759-1609854:1:exon
so has part: feature:1612933-1613053:1:exon
so has part: feature:1614995-1615198:1:exon
so has part: feature:1617130-1617217:1:exon
so has part: feature:1617653-1617938:1:exon

XP_030822278.1
type: Protein
SIO_000068: ncbiprotein

position:1609759:1
position: 1609759
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1617938:1
position: 1617938
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1609759-1609854:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1612933-1613053:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1614995-1615198:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1617130-1617217:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1617653-1617938:1:exon

C1QL1
type: Gene
subclass of: SO_0000704
RO_0002162: 87175
gene: C1QL1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1625270..1631057
location: region:1625270-1631057:1
so has part: feature:1625270-1631057:1:exon
subclass of: SO_0000010

115914070
type: Gene
SIO_000068: ncbigene

position:1625270:1
position: 1625270
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1631057:1
position: 1631057
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1625270-1631057:1:exon

C1QL1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 87175
gene: C1QL1
product: complement C1q like 1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 25 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
transcript id: XM_030966424.1
SIO_010081: C1QL1
subclass of: SO_0000673
so part of: C1QL1
location: join(1625270..1625904,1630505..1631057)
location: region:1625270-1631057:1
so has part: feature:1625270-1625904:1:exon
so has part: feature:1630505-1631057:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1625270-1625904:1:exon

position:1625904:1
position: 1625904
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1630505-1631057:1:exon

position:1630505:1
position: 1630505
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

C1QL1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 87175
gene: C1QL1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: C1q-related factor
translation: MVLVLVVLIPVLVSSAGTDGRYEMLGTCRMVCEPYGPAAPPQQPAERGPLPPPSTLVQGPQGKPGRPGKPGPPGPPGEPGPPGPVGARGEAGRPGPPGLPGPGATGAVSAATYSTVPRVAFYAGLKNPHEGYEVLKFDDVVTNLGNSYDAASGKFTCAIPGTYFFTYHVLMRGGDGTSMWADLCKNGQVRASAIAQDADQNYDYASNSVILHLDAGDEVFIKLDGGKAHGGNNNKYSTFSGFIIYSD
SIO_010081: C1QL1
subclass of: SO_0000673
so part of: C1QL1
location: join(1625341..1625904,1630505..1630684)
location: region:1625341-1630684:1
so has part: feature:1625341-1625904:1:exon
so has part: feature:1630505-1630684:1:exon

XP_030822284.1
type: Protein
SIO_000068: ncbiprotein

position:1625341:1
position: 1625341
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1630684:1
position: 1630684
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1625341-1625904:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1630505-1630684:1:exon

KIF18B
type: Gene
subclass of: SO_0000704
RO_0002162: 87175
gene: KIF18B
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1634765..1641801
location: region:1634765-1641801:1
so has part: feature:1634765-1641801:1:exon
subclass of: SO_0000010

115913777
type: Gene
SIO_000068: ncbigene

position:1634765:1
position: 1634765
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1641801:1
position: 1641801
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1634765-1641801:1:exon

KIF18B
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 87175
gene: KIF18B
product: kinesin family member 18B
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 14% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_030966004.1
SIO_010081: KIF18B
subclass of: SO_0000673
so part of: KIF18B
location: join(1634765..1634943,1635638..1635999,1637342..1637496,1637951..1638055,1638274..1638384,1638944..1639132,1639205..1639442,1641215..1641406,1641785..1641801)
location: region:1634765-1641801:1
so has part: feature:1634765-1634943:1:exon
so has part: feature:1635638-1635999:1:exon
so has part: feature:1637342-1637496:1:exon
so has part: feature:1637951-1638055:1:exon
so has part: feature:1638274-1638384:1:exon
so has part: feature:1638944-1639132:1:exon
so has part: feature:1639205-1639442:1:exon
so has part: feature:1641215-1641406:1:exon
so has part: feature:1641785-1641801:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1634765-1634943:1:exon

position:1634943:1
position: 1634943
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1635638-1635999:1:exon

position:1635638:1
position: 1635638
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1635999:1
position: 1635999
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1637342-1637496:1:exon

position:1637342:1
position: 1637342
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1637496:1
position: 1637496
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1637951-1638055:1:exon

position:1637951:1
position: 1637951
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1638055:1
position: 1638055
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1638274-1638384:1:exon

position:1638274:1
position: 1638274
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1638384:1
position: 1638384
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1638944-1639132:1:exon

position:1638944:1
position: 1638944
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1639132:1
position: 1639132
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1639205-1639442:1:exon

position:1639205:1
position: 1639205
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1639442:1
position: 1639442
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1641215-1641406:1:exon

position:1641215:1
position: 1641215
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1641406:1
position: 1641406
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:1641785-1641801:1:exon

position:1641785:1
position: 1641785
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

KIF18B
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 87175
gene: KIF18B
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: kinesin-like protein KIF18B
translation: MATSGTSDNVPGLPGTGGSRVTTAGLSPLSRAPVAAPLSAFPVTGAVPRPLPGHADPRRGSHEDPDQWMGSPEQPDAPAPGACWGAEPPPQEGSMAVVLRVRPPNPRERAAPSVLHVLNQRAVLFASEEPGGTGTGPGRRRRNLEFEFDHVFGERATQEEVFQHTTLPLLDTLLAGYNCSVFAYGASGVGKTHTMMGSKSTPGIVHLATVELYKRLEAMKDRSCEVLVSYQQVYKERVYDLLKPQGPLNIWEQPGKGVVAQGLSLHQPTTPEQLLGLLAKGNKNRAQRSTKANAASSRSHAIFQIQVKHWDLTGGDPHVAKLSFIDLAGSERAWDTPGRGEGMWEGTSINRSLLAFKSVVRALAGAKGGQCHVPFRDSKLTLLLKDSLVGSFRSTVIAAVSPAAPAGPDTYSTLRFASRARHILLPVSTGRAPAARERLPAGRRVPAEAPVTTPDPPVPSTAPQSCQELSPCSSPKPISVWPVKRMLESSSDSQTENSCGSRTRRKRQRGCYGWV
SIO_010081: KIF18B
subclass of: SO_0000673
so part of: KIF18B
location: join(1634765..1634943,1635638..1635999,1637342..1637496,1637951..1638055,1638274..1638384,1638944..1639132,1639205..1639442,1641215..1641406,1641785..1641801)
location: region:1634765-1641801:1
so has part: feature:1634765-1634943:1:exon
so has part: feature:1635638-1635999:1:exon
so has part: feature:1637342-1637496:1:exon
so has part: feature:1637951-1638055:1:exon
so has part: feature:1638274-1638384:1:exon
so has part: feature:1638944-1639132:1:exon
so has part: feature:1639205-1639442:1:exon
so has part: feature:1641215-1641406:1:exon
so has part: feature:1641785-1641801:1:exon

XP_030821864.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1634765-1634943:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1635638-1635999:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1637342-1637496:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1637951-1638055:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1638274-1638384:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1638944-1639132:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1639205-1639442:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1641215-1641406:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1641785-1641801:1:exon

FAM187A
type: Gene
subclass of: SO_0000704
RO_0002162: 87175
gene: FAM187A
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1642691..1643934
location: region:1642691-1643934:1
so has part: feature:1642691-1643934:1:exon
subclass of: SO_0000010

115913778
type: Gene
SIO_000068: ncbigene

position:1642691:1
position: 1642691
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1643934:1
position: 1643934
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1642691-1643934:1:exon

FAM187A
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 87175
gene: FAM187A
product: family with sequence similarity 187 member A
exception: unclassified transcription discrepancy
note: The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: inserted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins
transcript id: XM_030966005.1
SIO_010081: FAM187A
subclass of: SO_0000673
so part of: FAM187A
location: 1642691..1643934
location: region:1642691-1643934:1
so has part: feature:1642691-1643934:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1642691-1643934:1:exon

FAM187A
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 87175
gene: FAM187A
exception: unclassified translation discrepancy
note: The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: inserted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: LOW QUALITY PROTEIN: Ig-like V-type domain-containing protein FAM187A
translation: MGMRLLGATILLSLLDVLQAFAIEKKGDVFKKTACPAFLVFENVAYLADMTFELPCKCKPEEASSVVWYFQKNLHSHETTVLTDFNGTVIVDSKQVRAGSDLLKRFSIRLFSLIVFRAQVRDSGHYLCGTKEGLFFYGYDVDVQPTRKITVAFLDKDQHVQEDHKEKEFTLFTTFWDWTRCDRCGVRGEQRRIGLCYVQSAQLKPRYRTALPNVSSCGSRAVPKPFGHLIRLRSPEVAVRSCLAPCPKKEAPGEGVQSISNIVYKLGEKPXLPRVPIQYHNQPPKTDLVISCPGARPEHAVAWDKGSVRLYRAHYLVGVRKNMRLFIDHGNHLHLQRLRRRDKATYFCWREGELVAGFELTVTFEPRRQRSPSDPESIFVMRAVGISFAVIVGIFFLVHLSHCRSEVFRKVAKL
SIO_010081: FAM187A
subclass of: SO_0000673
so part of: FAM187A
location: 1642691..1643934
location: region:1642691-1643934:1
so has part: feature:1642691-1643934:1:exon

XP_030821865.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1642691-1643934:1:exon

CCDC103
type: Gene
subclass of: SO_0000704
RO_0002162: 87175
gene: CCDC103
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1647407..1651606)
location: region:1647407-1651606:-1
so has part: feature:1647407-1651606:-1:exon
subclass of: SO_0000010

115913779
type: Gene
SIO_000068: ncbigene

position:1647407:-1
position: 1647407
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1651606:-1
position: 1651606
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1647407-1651606:-1:exon

CCDC103
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 87175
gene: CCDC103
product: coiled-coil domain containing 103
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 10 Proteins, and 85% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_030966006.1
SIO_010081: CCDC103
subclass of: SO_0000673
so part of: CCDC103
location: complement(join(1647407..1647902,1649245..1649377,1650193..1650632,1650800..1650949,1651586..1651606))
location: region:1647407-1651606:-1
so has part: feature:1651586-1651606:-1:exon
so has part: feature:1650800-1650949:-1:exon
so has part: feature:1650193-1650632:-1:exon
so has part: feature:1649245-1649377:-1:exon
so has part: feature:1647407-1647902:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1651586-1651606:-1:exon

position:1651586:-1
position: 1651586
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1650800-1650949:-1:exon

position:1650800:-1
position: 1650800
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1650949:-1
position: 1650949
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1650193-1650632:-1:exon

position:1650193:-1
position: 1650193
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1650632:-1
position: 1650632
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1649245-1649377:-1:exon

position:1649245:-1
position: 1649245
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1649377:-1
position: 1649377
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1647407-1647902:-1:exon

position:1647902:-1
position: 1647902
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

CCDC103
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 87175
gene: CCDC103
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: coiled-coil domain-containing protein 103
translation: MLGGGKRSRSPSPAPAPLPPLLSPAPPLPKAPGLPSPPAATERPAPAASAAPAEKRRSAAPGPRCSTPGGAIAIERAAAGPAVCQGGSDRGEVPSCHPRARPCAVTVRVARRDCHDKIGPVLAALLRQKSVLEAIAGRAVPVPPGRPLCPRGPGTGPGMDPAGAFPVLERELRAALAEDERRQREGEAKLRALRQGVPDYGQFREIVLASHLKPLEKKDRLGQRRNVLWNPCAAPAGTAPACAVDIPQELDQLPGTAAEFHRDWRRCLKSGTEKYQFLLELGGEALGRIFQADVGFGLLGEFLTVLAENIHPGDRAAILQILQSLAGTERFGLNVALLSQAEKESSQDLFRKLQSRGGQAAGQGEAHPMENHLEKETEEEGTVVELMKCYQVS
SIO_010081: CCDC103
subclass of: SO_0000673
so part of: CCDC103
location: complement(join(1647465..1647902,1649245..1649377,1650193..1650632,1650800..1650949,1651586..1651606))
location: region:1647465-1651606:-1
so has part: feature:1651586-1651606:-1:exon
so has part: feature:1650800-1650949:-1:exon
so has part: feature:1650193-1650632:-1:exon
so has part: feature:1649245-1649377:-1:exon
so has part: feature:1647465-1647902:-1:exon

XP_030821866.1
type: Protein
SIO_000068: ncbiprotein

position:1647465:-1
position: 1647465
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1651586-1651606:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1650800-1650949:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1650193-1650632:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1649245-1649377:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1647465-1647902:-1:exon

EFTUD2
type: Gene
subclass of: SO_0000704
RO_0002162: 87175
gene: EFTUD2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1650877..1674493
location: region:1650877-1674493:1
so has part: feature:1650877-1674493:1:exon
subclass of: SO_0000010

115914059
type: Gene
SIO_000068: ncbigene

position:1650877:1
position: 1650877
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1674493:1
position: 1674493
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1650877-1674493:1:exon

EFTUD2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 87175
gene: EFTUD2
product: elongation factor Tu GTP binding domain containing 2, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 mRNAs, 34 ESTs, 19 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
transcript id: XM_030966409.1
SIO_010081: EFTUD2
subclass of: SO_0000673
so part of: EFTUD2
location: join(1650877..1650933,1651604..1651709,1652463..1652628,1653321..1653399,1655119..1655194,1655721..1655786,1656258..1656293,1657025..1657115,1657952..1658034,1658497..1658663,1659640..1659764,1661304..1661367,1662101..1662191,1662948..1663083,1663354..1663481,1664463..1664656,1664786..1664897,1666130..1666270,1666698..1666799,1667354..1667436,1668996..1669082,1669340..1669466,1669909..1669996,1670312..1670430,1670797..1670891,1672068..1672221,1673050..1673157,1673964..1674493)
location: region:1650877-1674493:1
so has part: feature:1650877-1650933:1:exon
so has part: feature:1651604-1651709:1:exon
so has part: feature:1652463-1652628:1:exon
so has part: feature:1653321-1653399:1:exon
so has part: feature:1655119-1655194:1:exon
so has part: feature:1655721-1655786:1:exon
so has part: feature:1656258-1656293:1:exon
so has part: feature:1657025-1657115:1:exon
so has part: feature:1657952-1658034:1:exon
so has part: feature:1658497-1658663:1:exon
so has part: feature:1659640-1659764:1:exon
so has part: feature:1661304-1661367:1:exon
so has part: feature:1662101-1662191:1:exon
so has part: feature:1662948-1663083:1:exon
so has part: feature:1663354-1663481:1:exon
so has part: feature:1664463-1664656:1:exon
so has part: feature:1664786-1664897:1:exon
so has part: feature:1666130-1666270:1:exon
so has part: feature:1666698-1666799:1:exon
so has part: feature:1667354-1667436:1:exon
so has part: feature:1668996-1669082:1:exon
so has part: feature:1669340-1669466:1:exon
so has part: feature:1669909-1669996:1:exon
so has part: feature:1670312-1670430:1:exon
so has part: feature:1670797-1670891:1:exon
so has part: feature:1672068-1672221:1:exon
so has part: feature:1673050-1673157:1:exon
so has part: feature:1673964-1674493:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1650877-1650933:1:exon

position:1650933:1
position: 1650933
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1651604-1651709:1:exon

position:1651604:1
position: 1651604
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1651709:1
position: 1651709
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1652463-1652628:1:exon

position:1652463:1
position: 1652463
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1652628:1
position: 1652628
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1653321-1653399:1:exon

position:1653321:1
position: 1653321
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1653399:1
position: 1653399
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1655119-1655194:1:exon

position:1655119:1
position: 1655119
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1655194:1
position: 1655194
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1655721-1655786:1:exon

position:1655721:1
position: 1655721
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1655786:1
position: 1655786
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1656258-1656293:1:exon

position:1656258:1
position: 1656258
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1656293:1
position: 1656293
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1657025-1657115:1:exon

position:1657025:1
position: 1657025
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1657115:1
position: 1657115
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:1657952-1658034:1:exon

position:1657952:1
position: 1657952
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1658034:1
position: 1658034
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:1658497-1658663:1:exon

position:1658497:1
position: 1658497
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1658663:1
position: 1658663
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:1659640-1659764:1:exon

position:1659640:1
position: 1659640
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1659764:1
position: 1659764
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:1661304-1661367:1:exon

position:1661304:1
position: 1661304
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1661367:1
position: 1661367
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:1662101-1662191:1:exon

position:1662101:1
position: 1662101
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1662191:1
position: 1662191
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:1662948-1663083:1:exon

position:1662948:1
position: 1662948
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1663083:1
position: 1663083
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:1663354-1663481:1:exon

position:1663354:1
position: 1663354
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1663481:1
position: 1663481
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:1664463-1664656:1:exon

position:1664463:1
position: 1664463
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1664656:1
position: 1664656
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:1664786-1664897:1:exon

position:1664786:1
position: 1664786
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1664897:1
position: 1664897
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:1666130-1666270:1:exon

position:1666130:1
position: 1666130
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1666270:1
position: 1666270
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:1666698-1666799:1:exon

position:1666698:1
position: 1666698
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1666799:1
position: 1666799
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:1667354-1667436:1:exon

position:1667354:1
position: 1667354
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1667436:1
position: 1667436
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:1668996-1669082:1:exon

position:1668996:1
position: 1668996
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1669082:1
position: 1669082
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 22
SIO_000628: feature:1669340-1669466:1:exon

position:1669340:1
position: 1669340
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1669466:1
position: 1669466
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 23
SIO_000628: feature:1669909-1669996:1:exon

position:1669909:1
position: 1669909
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1669996:1
position: 1669996
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 24
SIO_000628: feature:1670312-1670430:1:exon

position:1670312:1
position: 1670312
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1670430:1
position: 1670430
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 25
SIO_000628: feature:1670797-1670891:1:exon

position:1670797:1
position: 1670797
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1670891:1
position: 1670891
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 26
SIO_000628: feature:1672068-1672221:1:exon

position:1672068:1
position: 1672068
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1672221:1
position: 1672221
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 27
SIO_000628: feature:1673050-1673157:1:exon

position:1673050:1
position: 1673050
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1673157:1
position: 1673157
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 28
SIO_000628: feature:1673964-1674493:1:exon

position:1673964:1
position: 1673964
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

EFTUD2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 87175
gene: EFTUD2
product: elongation factor Tu GTP binding domain containing 2, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 mRNAs, 34 ESTs, 19 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_030966410.1
SIO_010081: EFTUD2
subclass of: SO_0000673
so part of: EFTUD2
location: join(1650890..1650933,1651584..1651709,1652463..1652628,1653321..1653399,1655119..1655194,1655721..1655786,1656258..1656293,1657025..1657115,1657952..1658034,1658497..1658663,1659640..1659764,1661304..1661367,1662101..1662191,1662948..1663083,1663354..1663481,1664463..1664656,1664786..1664897,1666130..1666270,1666698..1666799,1667354..1667436,1668996..1669082,1669340..1669466,1669909..1669996,1670312..1670430,1670797..1670891,1672068..1672221,1673050..1673157,1673964..1674493)
location: region:1650890-1674493:1
so has part: feature:1650890-1650933:1:exon
so has part: feature:1651584-1651709:1:exon
so has part: feature:1652463-1652628:1:exon
so has part: feature:1653321-1653399:1:exon
so has part: feature:1655119-1655194:1:exon
so has part: feature:1655721-1655786:1:exon
so has part: feature:1656258-1656293:1:exon
so has part: feature:1657025-1657115:1:exon
so has part: feature:1657952-1658034:1:exon
so has part: feature:1658497-1658663:1:exon
so has part: feature:1659640-1659764:1:exon
so has part: feature:1661304-1661367:1:exon
so has part: feature:1662101-1662191:1:exon
so has part: feature:1662948-1663083:1:exon
so has part: feature:1663354-1663481:1:exon
so has part: feature:1664463-1664656:1:exon
so has part: feature:1664786-1664897:1:exon
so has part: feature:1666130-1666270:1:exon
so has part: feature:1666698-1666799:1:exon
so has part: feature:1667354-1667436:1:exon
so has part: feature:1668996-1669082:1:exon
so has part: feature:1669340-1669466:1:exon
so has part: feature:1669909-1669996:1:exon
so has part: feature:1670312-1670430:1:exon
so has part: feature:1670797-1670891:1:exon
so has part: feature:1672068-1672221:1:exon
so has part: feature:1673050-1673157:1:exon
so has part: feature:1673964-1674493:1:exon

position:1650890:1
position: 1650890
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1650890-1650933:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1651584-1651709:1:exon

position:1651584:1
position: 1651584
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1652463-1652628:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1653321-1653399:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1655119-1655194:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1655721-1655786:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1656258-1656293:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1657025-1657115:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1657952-1658034:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1658497-1658663:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1659640-1659764:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1661304-1661367:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1662101-1662191:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1662948-1663083:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1663354-1663481:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1664463-1664656:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1664786-1664897:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:1666130-1666270:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:1666698-1666799:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:1667354-1667436:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:1668996-1669082:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:1669340-1669466:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:1669909-1669996:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:1670312-1670430:1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:1670797-1670891:1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:1672068-1672221:1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:1673050-1673157:1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:1673964-1674493:1:exon

EFTUD2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 87175
gene: EFTUD2
product: elongation factor Tu GTP binding domain containing 2, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 mRNAs, 34 ESTs, 19 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XM_030966411.1
SIO_010081: EFTUD2
subclass of: SO_0000673
so part of: EFTUD2
location: join(1650964..1650985,1651604..1651709,1652463..1652628,1653321..1653399,1655119..1655194,1655721..1655786,1656258..1656293,1657025..1657115,1657952..1658034,1658497..1658663,1659640..1659764,1661304..1661367,1662101..1662191,1662948..1663083,1663354..1663481,1664463..1664656,1664786..1664897,1666130..1666270,1666698..1666799,1667354..1667436,1668996..1669082,1669340..1669466,1669909..1669996,1670312..1670430,1670797..1670891,1672068..1672221,1673050..1673157,1673964..1674493)
location: region:1650964-1674493:1
so has part: feature:1650964-1650985:1:exon
so has part: feature:1651604-1651709:1:exon
so has part: feature:1652463-1652628:1:exon
so has part: feature:1653321-1653399:1:exon
so has part: feature:1655119-1655194:1:exon
so has part: feature:1655721-1655786:1:exon
so has part: feature:1656258-1656293:1:exon
so has part: feature:1657025-1657115:1:exon
so has part: feature:1657952-1658034:1:exon
so has part: feature:1658497-1658663:1:exon
so has part: feature:1659640-1659764:1:exon
so has part: feature:1661304-1661367:1:exon
so has part: feature:1662101-1662191:1:exon
so has part: feature:1662948-1663083:1:exon
so has part: feature:1663354-1663481:1:exon
so has part: feature:1664463-1664656:1:exon
so has part: feature:1664786-1664897:1:exon
so has part: feature:1666130-1666270:1:exon
so has part: feature:1666698-1666799:1:exon
so has part: feature:1667354-1667436:1:exon
so has part: feature:1668996-1669082:1:exon
so has part: feature:1669340-1669466:1:exon
so has part: feature:1669909-1669996:1:exon
so has part: feature:1670312-1670430:1:exon
so has part: feature:1670797-1670891:1:exon
so has part: feature:1672068-1672221:1:exon
so has part: feature:1673050-1673157:1:exon
so has part: feature:1673964-1674493:1:exon

position:1650964:1
position: 1650964
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1650964-1650985:1:exon

position:1650985:1
position: 1650985
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1651604-1651709:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1652463-1652628:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1653321-1653399:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1655119-1655194:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1655721-1655786:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1656258-1656293:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1657025-1657115:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1657952-1658034:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1658497-1658663:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1659640-1659764:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1661304-1661367:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1662101-1662191:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1662948-1663083:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1663354-1663481:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1664463-1664656:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1664786-1664897:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:1666130-1666270:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:1666698-1666799:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:1667354-1667436:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:1668996-1669082:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:1669340-1669466:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:1669909-1669996:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:1670312-1670430:1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:1670797-1670891:1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:1672068-1672221:1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:1673050-1673157:1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:1673964-1674493:1:exon

EFTUD2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 87175
gene: EFTUD2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: 116 kDa U5 small nuclear ribonucleoprotein component
translation: MDTDLYDEFGNYIGPELDSDDDDDELGREAKDLDELEDDDDDDDMGEHDEEHPGMEVVLHEDKKYYPTAEEVYGPEVETIVQEEDTQPLTEPIIKPVKTKKFSLMEQTLPVTVYEMDFLADLMDNSELIRNVTLCGHLHHGKTCFVDCLIEQTHPEIRKRDDQDLCYTDILFTEQERGVGIKSTPVTIVLPDTKGKSFLFNIIDTPGHVNFSDEVTAGLRISDGVVLFIDAAEGVMLNTERLIKHAVQERLAVTVCINKIDRLILELKLPPTDAYYKLRHIVDEVNGLISMYSTDENLVLSPLLGNVCFSSSQYSICFTLGSFAKIYADTYGDINYQEFAKRLWGDIYFNPKTRKFTKKAPTSSSQRSFVEFILEPLYKILAQVVGDVDTTLPRTLDELGIHLTKEELKLNIRPLLRLVCKKFFGEFTGFVDMCVQHIPSPKVGAKTKIEHTYTGGVDSDLGEAMSECDPDGPLMCHTTKMYSTDDGVQFHAFGRVLSGTIHAGQPVKVLGENYTLEDEEDSQICTVGRLWISVARYHIEVNRVPAGNWVLIEGVDQPIVKTATVTEPRGNEEAQIFRPLKFNTTSVIKIAVEPVNPSELPKMLDGLRKVNKSYPSLTTKVEESGEHVILGTGELYLDCVMHDLRKMYSEIDIKVADPVVTFCETVVETSSLKCFAETPNKKNKITMIAEPLEKGLAEDIENEVVQITWNRKKLGEFFQTKYDWDLLAARSIWAFGPDATGPNILVDDTLPSEVDKSLLGSVKDSIVQGFQWGTREGPLCDELIRNVKFKILDAVIAQEPLHRGGGQIIPTARRVVYSAFLMATPRLMEPYYFVEVQAPADCVSAVYTVLARRRGHVTQDAPIPGSPLYTIKAFIPAIDSFGFETDLRTHTQGQAFSLSVFHHWQIVPGDPLDKSIVIRPLEPQPAPHLAREFMIKTRRRKGLSEDVSISKFFDDPMLLELAKQDVVLNYPM
SIO_010081: EFTUD2
subclass of: SO_0000673
so part of: EFTUD2
location: join(1651605..1651709,1652463..1652628,1653321..1653399,1655119..1655194,1655721..1655786,1656258..1656293,1657025..1657115,1657952..1658034,1658497..1658663,1659640..1659764,1661304..1661367,1662101..1662191,1662948..1663083,1663354..1663481,1664463..1664656,1664786..1664897,1666130..1666270,1666698..1666799,1667354..1667436,1668996..1669082,1669340..1669466,1669909..1669996,1670312..1670430,1670797..1670891,1672068..1672221,1673050..1673157,1673964..1674059)
location: region:1651605-1674059:1
so has part: feature:1651605-1651709:1:exon
so has part: feature:1652463-1652628:1:exon
so has part: feature:1653321-1653399:1:exon
so has part: feature:1655119-1655194:1:exon
so has part: feature:1655721-1655786:1:exon
so has part: feature:1656258-1656293:1:exon
so has part: feature:1657025-1657115:1:exon
so has part: feature:1657952-1658034:1:exon
so has part: feature:1658497-1658663:1:exon
so has part: feature:1659640-1659764:1:exon
so has part: feature:1661304-1661367:1:exon
so has part: feature:1662101-1662191:1:exon
so has part: feature:1662948-1663083:1:exon
so has part: feature:1663354-1663481:1:exon
so has part: feature:1664463-1664656:1:exon
so has part: feature:1664786-1664897:1:exon
so has part: feature:1666130-1666270:1:exon
so has part: feature:1666698-1666799:1:exon
so has part: feature:1667354-1667436:1:exon
so has part: feature:1668996-1669082:1:exon
so has part: feature:1669340-1669466:1:exon
so has part: feature:1669909-1669996:1:exon
so has part: feature:1670312-1670430:1:exon
so has part: feature:1670797-1670891:1:exon
so has part: feature:1672068-1672221:1:exon
so has part: feature:1673050-1673157:1:exon
so has part: feature:1673964-1674059:1:exon

XP_030822269.1
type: Protein
SIO_000068: ncbiprotein

position:1651605:1
position: 1651605
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1674059:1
position: 1674059
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1651605-1651709:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1652463-1652628:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1653321-1653399:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1655119-1655194:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1655721-1655786:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1656258-1656293:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1657025-1657115:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1657952-1658034:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1658497-1658663:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1659640-1659764:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1661304-1661367:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1662101-1662191:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1662948-1663083:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1663354-1663481:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1664463-1664656:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1664786-1664897:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1666130-1666270:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:1666698-1666799:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:1667354-1667436:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:1668996-1669082:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:1669340-1669466:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:1669909-1669996:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:1670312-1670430:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:1670797-1670891:1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:1672068-1672221:1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:1673050-1673157:1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:1673964-1674059:1:exon

EFTUD2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 87175
gene: EFTUD2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: 116 kDa U5 small nuclear ribonucleoprotein component
translation: MDTDLYDEFGNYIGPELDSDDDDDELGREAKDLDELEDDDDDDDMGEHDEEHPGMEVVLHEDKKYYPTAEEVYGPEVETIVQEEDTQPLTEPIIKPVKTKKFSLMEQTLPVTVYEMDFLADLMDNSELIRNVTLCGHLHHGKTCFVDCLIEQTHPEIRKRDDQDLCYTDILFTEQERGVGIKSTPVTIVLPDTKGKSFLFNIIDTPGHVNFSDEVTAGLRISDGVVLFIDAAEGVMLNTERLIKHAVQERLAVTVCINKIDRLILELKLPPTDAYYKLRHIVDEVNGLISMYSTDENLVLSPLLGNVCFSSSQYSICFTLGSFAKIYADTYGDINYQEFAKRLWGDIYFNPKTRKFTKKAPTSSSQRSFVEFILEPLYKILAQVVGDVDTTLPRTLDELGIHLTKEELKLNIRPLLRLVCKKFFGEFTGFVDMCVQHIPSPKVGAKTKIEHTYTGGVDSDLGEAMSECDPDGPLMCHTTKMYSTDDGVQFHAFGRVLSGTIHAGQPVKVLGENYTLEDEEDSQICTVGRLWISVARYHIEVNRVPAGNWVLIEGVDQPIVKTATVTEPRGNEEAQIFRPLKFNTTSVIKIAVEPVNPSELPKMLDGLRKVNKSYPSLTTKVEESGEHVILGTGELYLDCVMHDLRKMYSEIDIKVADPVVTFCETVVETSSLKCFAETPNKKNKITMIAEPLEKGLAEDIENEVVQITWNRKKLGEFFQTKYDWDLLAARSIWAFGPDATGPNILVDDTLPSEVDKSLLGSVKDSIVQGFQWGTREGPLCDELIRNVKFKILDAVIAQEPLHRGGGQIIPTARRVVYSAFLMATPRLMEPYYFVEVQAPADCVSAVYTVLARRRGHVTQDAPIPGSPLYTIKAFIPAIDSFGFETDLRTHTQGQAFSLSVFHHWQIVPGDPLDKSIVIRPLEPQPAPHLAREFMIKTRRRKGLSEDVSISKFFDDPMLLELAKQDVVLNYPM
SIO_010081: EFTUD2
subclass of: SO_0000673
so part of: EFTUD2
location: join(1651605..1651709,1652463..1652628,1653321..1653399,1655119..1655194,1655721..1655786,1656258..1656293,1657025..1657115,1657952..1658034,1658497..1658663,1659640..1659764,1661304..1661367,1662101..1662191,1662948..1663083,1663354..1663481,1664463..1664656,1664786..1664897,1666130..1666270,1666698..1666799,1667354..1667436,1668996..1669082,1669340..1669466,1669909..1669996,1670312..1670430,1670797..1670891,1672068..1672221,1673050..1673157,1673964..1674059)
location: region:1651605-1674059:1
so has part: feature:1651605-1651709:1:exon
so has part: feature:1652463-1652628:1:exon
so has part: feature:1653321-1653399:1:exon
so has part: feature:1655119-1655194:1:exon
so has part: feature:1655721-1655786:1:exon
so has part: feature:1656258-1656293:1:exon
so has part: feature:1657025-1657115:1:exon
so has part: feature:1657952-1658034:1:exon
so has part: feature:1658497-1658663:1:exon
so has part: feature:1659640-1659764:1:exon
so has part: feature:1661304-1661367:1:exon
so has part: feature:1662101-1662191:1:exon
so has part: feature:1662948-1663083:1:exon
so has part: feature:1663354-1663481:1:exon
so has part: feature:1664463-1664656:1:exon
so has part: feature:1664786-1664897:1:exon
so has part: feature:1666130-1666270:1:exon
so has part: feature:1666698-1666799:1:exon
so has part: feature:1667354-1667436:1:exon
so has part: feature:1668996-1669082:1:exon
so has part: feature:1669340-1669466:1:exon
so has part: feature:1669909-1669996:1:exon
so has part: feature:1670312-1670430:1:exon
so has part: feature:1670797-1670891:1:exon
so has part: feature:1672068-1672221:1:exon
so has part: feature:1673050-1673157:1:exon
so has part: feature:1673964-1674059:1:exon

XP_030822270.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1651605-1651709:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1652463-1652628:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1653321-1653399:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1655119-1655194:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1655721-1655786:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1656258-1656293:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1657025-1657115:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1657952-1658034:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1658497-1658663:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1659640-1659764:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1661304-1661367:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1662101-1662191:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1662948-1663083:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1663354-1663481:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1664463-1664656:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1664786-1664897:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1666130-1666270:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:1666698-1666799:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:1667354-1667436:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:1668996-1669082:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:1669340-1669466:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:1669909-1669996:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:1670312-1670430:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:1670797-1670891:1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:1672068-1672221:1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:1673050-1673157:1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:1673964-1674059:1:exon

EFTUD2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 87175
gene: EFTUD2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: 116 kDa U5 small nuclear ribonucleoprotein component
translation: MDTDLYDEFGNYIGPELDSDDDDDELGREAKDLDELEDDDDDDDMGEHDEEHPGMEVVLHEDKKYYPTAEEVYGPEVETIVQEEDTQPLTEPIIKPVKTKKFSLMEQTLPVTVYEMDFLADLMDNSELIRNVTLCGHLHHGKTCFVDCLIEQTHPEIRKRDDQDLCYTDILFTEQERGVGIKSTPVTIVLPDTKGKSFLFNIIDTPGHVNFSDEVTAGLRISDGVVLFIDAAEGVMLNTERLIKHAVQERLAVTVCINKIDRLILELKLPPTDAYYKLRHIVDEVNGLISMYSTDENLVLSPLLGNVCFSSSQYSICFTLGSFAKIYADTYGDINYQEFAKRLWGDIYFNPKTRKFTKKAPTSSSQRSFVEFILEPLYKILAQVVGDVDTTLPRTLDELGIHLTKEELKLNIRPLLRLVCKKFFGEFTGFVDMCVQHIPSPKVGAKTKIEHTYTGGVDSDLGEAMSECDPDGPLMCHTTKMYSTDDGVQFHAFGRVLSGTIHAGQPVKVLGENYTLEDEEDSQICTVGRLWISVARYHIEVNRVPAGNWVLIEGVDQPIVKTATVTEPRGNEEAQIFRPLKFNTTSVIKIAVEPVNPSELPKMLDGLRKVNKSYPSLTTKVEESGEHVILGTGELYLDCVMHDLRKMYSEIDIKVADPVVTFCETVVETSSLKCFAETPNKKNKITMIAEPLEKGLAEDIENEVVQITWNRKKLGEFFQTKYDWDLLAARSIWAFGPDATGPNILVDDTLPSEVDKSLLGSVKDSIVQGFQWGTREGPLCDELIRNVKFKILDAVIAQEPLHRGGGQIIPTARRVVYSAFLMATPRLMEPYYFVEVQAPADCVSAVYTVLARRRGHVTQDAPIPGSPLYTIKAFIPAIDSFGFETDLRTHTQGQAFSLSVFHHWQIVPGDPLDKSIVIRPLEPQPAPHLAREFMIKTRRRKGLSEDVSISKFFDDPMLLELAKQDVVLNYPM
SIO_010081: EFTUD2
subclass of: SO_0000673
so part of: EFTUD2
location: join(1651605..1651709,1652463..1652628,1653321..1653399,1655119..1655194,1655721..1655786,1656258..1656293,1657025..1657115,1657952..1658034,1658497..1658663,1659640..1659764,1661304..1661367,1662101..1662191,1662948..1663083,1663354..1663481,1664463..1664656,1664786..1664897,1666130..1666270,1666698..1666799,1667354..1667436,1668996..1669082,1669340..1669466,1669909..1669996,1670312..1670430,1670797..1670891,1672068..1672221,1673050..1673157,1673964..1674059)
location: region:1651605-1674059:1
so has part: feature:1651605-1651709:1:exon
so has part: feature:1652463-1652628:1:exon
so has part: feature:1653321-1653399:1:exon
so has part: feature:1655119-1655194:1:exon
so has part: feature:1655721-1655786:1:exon
so has part: feature:1656258-1656293:1:exon
so has part: feature:1657025-1657115:1:exon
so has part: feature:1657952-1658034:1:exon
so has part: feature:1658497-1658663:1:exon
so has part: feature:1659640-1659764:1:exon
so has part: feature:1661304-1661367:1:exon
so has part: feature:1662101-1662191:1:exon
so has part: feature:1662948-1663083:1:exon
so has part: feature:1663354-1663481:1:exon
so has part: feature:1664463-1664656:1:exon
so has part: feature:1664786-1664897:1:exon
so has part: feature:1666130-1666270:1:exon
so has part: feature:1666698-1666799:1:exon
so has part: feature:1667354-1667436:1:exon
so has part: feature:1668996-1669082:1:exon
so has part: feature:1669340-1669466:1:exon
so has part: feature:1669909-1669996:1:exon
so has part: feature:1670312-1670430:1:exon
so has part: feature:1670797-1670891:1:exon
so has part: feature:1672068-1672221:1:exon
so has part: feature:1673050-1673157:1:exon
so has part: feature:1673964-1674059:1:exon

XP_030822271.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1651605-1651709:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1652463-1652628:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1653321-1653399:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1655119-1655194:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1655721-1655786:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1656258-1656293:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1657025-1657115:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1657952-1658034:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1658497-1658663:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1659640-1659764:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1661304-1661367:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1662101-1662191:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1662948-1663083:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1663354-1663481:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1664463-1664656:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1664786-1664897:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1666130-1666270:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:1666698-1666799:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:1667354-1667436:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:1668996-1669082:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:1669340-1669466:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:1669909-1669996:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:1670312-1670430:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:1670797-1670891:1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:1672068-1672221:1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:1673050-1673157:1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:1673964-1674059:1:exon

GJC1
type: Gene
subclass of: SO_0000704
RO_0002162: 87175
gene: GJC1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1680046..1705767
location: region:1680046-1705767:1
so has part: feature:1680046-1705767:1:exon
subclass of: SO_0000010

115914022
type: Gene
SIO_000068: ncbigene

position:1680046:1
position: 1680046
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1705767:1
position: 1705767
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1680046-1705767:1:exon

GJC1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 87175
gene: GJC1
product: gap junction protein gamma 1, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, 19 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XM_030966366.1
SIO_010081: GJC1
subclass of: SO_0000673
so part of: GJC1
location: join(1680046..1680096,1701751..1701864,1703815..1703887,1704002..1705767)
location: region:1680046-1705767:1
so has part: feature:1680046-1680096:1:exon
so has part: feature:1701751-1701864:1:exon
so has part: feature:1703815-1703887:1:exon
so has part: feature:1704002-1705767:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1680046-1680096:1:exon

position:1680096:1
position: 1680096
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1701751-1701864:1:exon

position:1701751:1
position: 1701751
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1701864:1
position: 1701864
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1703815-1703887:1:exon

position:1703815:1
position: 1703815
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1703887:1
position: 1703887
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1704002-1705767:1:exon

position:1704002:1
position: 1704002
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

GJC1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 87175
gene: GJC1
product: gap junction protein gamma 1, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, 19 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XM_030966367.1
SIO_010081: GJC1
subclass of: SO_0000673
so part of: GJC1
location: join(1680046..1680096,1701751..1701864,1703818..1703887,1704002..1705767)
location: region:1680046-1705767:1
so has part: feature:1680046-1680096:1:exon
so has part: feature:1701751-1701864:1:exon
so has part: feature:1703818-1703887:1:exon
so has part: feature:1704002-1705767:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1680046-1680096:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1701751-1701864:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1703818-1703887:1:exon

position:1703818:1
position: 1703818
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1704002-1705767:1:exon

GJC1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 87175
gene: GJC1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: gap junction gamma-1 protein
translation: MSWSFLTRLLEEIQNHSTFVGKIWLTVLIVFRIVLIAVGGESIYYDEQSKFVCNTEQPGCENVCYDSFAPLSHVRFWVFQIILVATPSVLYLGYAIHKIARMVEHSEASRRARRRSLPIRWKQHRGLEEAEGDHEEDPMMYPEIEVESVRESKEKQSPAKAKHDSRRQIREDGLMRIYVLQLLVRALFEVGFLVGQYFLYGFQVSPVFVCSRKPCPHNVDCFISRPTEKTIFLLIMYGVSCMCLLLNVWEMLHLGFGTIRDTLNAKKKELVDSGTFNYPFTWNTPSAPPGYNIALKPEQMQCTELSNAKMAYRQNKANIAQEQQYGSNEGNIPSDLEILQREIKVAQDRLDLAIQAYNNQNNPSSSRGKKSKAGSNKSSASSKSGDGKNSVWI
SIO_010081: GJC1
subclass of: SO_0000673
so part of: GJC1
location: 1704021..1705202
location: region:1704021-1705202:1
so has part: feature:1704021-1705202:1:exon

XP_030822226.1
type: Protein
SIO_000068: ncbiprotein

position:1704021:1
position: 1704021
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1705202:1
position: 1705202
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1704021-1705202:1:exon

GJC1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 87175
gene: GJC1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: gap junction gamma-1 protein
translation: MSWSFLTRLLEEIQNHSTFVGKIWLTVLIVFRIVLIAVGGESIYYDEQSKFVCNTEQPGCENVCYDSFAPLSHVRFWVFQIILVATPSVLYLGYAIHKIARMVEHSEASRRARRRSLPIRWKQHRGLEEAEGDHEEDPMMYPEIEVESVRESKEKQSPAKAKHDSRRQIREDGLMRIYVLQLLVRALFEVGFLVGQYFLYGFQVSPVFVCSRKPCPHNVDCFISRPTEKTIFLLIMYGVSCMCLLLNVWEMLHLGFGTIRDTLNAKKKELVDSGTFNYPFTWNTPSAPPGYNIALKPEQMQCTELSNAKMAYRQNKANIAQEQQYGSNEGNIPSDLEILQREIKVAQDRLDLAIQAYNNQNNPSSSRGKKSKAGSNKSSASSKSGDGKNSVWI
SIO_010081: GJC1
subclass of: SO_0000673
so part of: GJC1
location: 1704021..1705202
location: region:1704021-1705202:1
so has part: feature:1704021-1705202:1:exon

XP_030822227.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1704021-1705202:1:exon

ADAM11
type: Gene
subclass of: SO_0000704
RO_0002162: 87175
gene: ADAM11
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1719045..1732433)
location: region:1719045-1732433:-1
so has part: feature:1719045-1732433:-1:exon
subclass of: SO_0000010

115914107
type: Gene
SIO_000068: ncbigene

position:1719045:-1
position: 1719045
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1732433:-1
position: 1732433
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1719045-1732433:-1:exon

ADAM11
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 87175
gene: ADAM11
product: ADAM metallopeptidase domain 11, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 2 Proteins, and 97% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_030966458.1
SIO_010081: ADAM11
subclass of: SO_0000673
so part of: ADAM11
location: complement(join(1719045..1720864,1721778..1721892,1723101..1723269,1723357..1723476,1724164..1724263,1724334..1724397,1724939..1724989,1725069..1725149,1725255..1725347,1725430..1725501,1725759..1725858,1726500..1726551,1726649..1726739,1726822..1726906,1726982..1727148,1727605..1727676,1727766..1727840,1728302..1728369,1728456..1728504,1728626..1728692,1728770..1728855,1729208..1729274,1729599..1729675,1730879..1731066,1732204..1732433))
location: region:1719045-1732433:-1
so has part: feature:1732204-1732433:-1:exon
so has part: feature:1730879-1731066:-1:exon
so has part: feature:1729599-1729675:-1:exon
so has part: feature:1729208-1729274:-1:exon
so has part: feature:1728770-1728855:-1:exon
so has part: feature:1728626-1728692:-1:exon
so has part: feature:1728456-1728504:-1:exon
so has part: feature:1728302-1728369:-1:exon
so has part: feature:1727766-1727840:-1:exon
so has part: feature:1727605-1727676:-1:exon
so has part: feature:1726982-1727148:-1:exon
so has part: feature:1726822-1726906:-1:exon
so has part: feature:1726649-1726739:-1:exon
so has part: feature:1726500-1726551:-1:exon
so has part: feature:1725759-1725858:-1:exon
so has part: feature:1725430-1725501:-1:exon
so has part: feature:1725255-1725347:-1:exon
so has part: feature:1725069-1725149:-1:exon
so has part: feature:1724939-1724989:-1:exon
so has part: feature:1724334-1724397:-1:exon
so has part: feature:1724164-1724263:-1:exon
so has part: feature:1723357-1723476:-1:exon
so has part: feature:1723101-1723269:-1:exon
so has part: feature:1721778-1721892:-1:exon
so has part: feature:1719045-1720864:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1732204-1732433:-1:exon

position:1732204:-1
position: 1732204
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1730879-1731066:-1:exon

position:1730879:-1
position: 1730879
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1731066:-1
position: 1731066
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1729599-1729675:-1:exon

position:1729599:-1
position: 1729599
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1729675:-1
position: 1729675
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1729208-1729274:-1:exon

position:1729208:-1
position: 1729208
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1729274:-1
position: 1729274
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1728770-1728855:-1:exon

position:1728770:-1
position: 1728770
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1728855:-1
position: 1728855
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1728626-1728692:-1:exon

position:1728626:-1
position: 1728626
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1728692:-1
position: 1728692
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1728456-1728504:-1:exon

position:1728456:-1
position: 1728456
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1728504:-1
position: 1728504
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1728302-1728369:-1:exon

position:1728302:-1
position: 1728302
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1728369:-1
position: 1728369
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:1727766-1727840:-1:exon

position:1727766:-1
position: 1727766
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1727840:-1
position: 1727840
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:1727605-1727676:-1:exon

position:1727605:-1
position: 1727605
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1727676:-1
position: 1727676
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:1726982-1727148:-1:exon

position:1726982:-1
position: 1726982
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1727148:-1
position: 1727148
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:1726822-1726906:-1:exon

position:1726822:-1
position: 1726822
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1726906:-1
position: 1726906
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:1726649-1726739:-1:exon

position:1726649:-1
position: 1726649
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1726739:-1
position: 1726739
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:1726500-1726551:-1:exon

position:1726500:-1
position: 1726500
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1726551:-1
position: 1726551
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:1725759-1725858:-1:exon

position:1725759:-1
position: 1725759
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1725858:-1
position: 1725858
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:1725430-1725501:-1:exon

position:1725430:-1
position: 1725430
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1725501:-1
position: 1725501
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:1725255-1725347:-1:exon

position:1725255:-1
position: 1725255
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1725347:-1
position: 1725347
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:1725069-1725149:-1:exon

position:1725069:-1
position: 1725069
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1725149:-1
position: 1725149
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:1724939-1724989:-1:exon

position:1724939:-1
position: 1724939
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1724989:-1
position: 1724989
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:1724334-1724397:-1:exon

position:1724334:-1
position: 1724334
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1724397:-1
position: 1724397
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:1724164-1724263:-1:exon

position:1724164:-1
position: 1724164
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1724263:-1
position: 1724263
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 22
SIO_000628: feature:1723357-1723476:-1:exon

position:1723357:-1
position: 1723357
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1723476:-1
position: 1723476
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 23
SIO_000628: feature:1723101-1723269:-1:exon

position:1723101:-1
position: 1723101
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1723269:-1
position: 1723269
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 24
SIO_000628: feature:1721778-1721892:-1:exon

position:1721778:-1
position: 1721778
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1721892:-1
position: 1721892
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 25
SIO_000628: feature:1719045-1720864:-1:exon

position:1720864:-1
position: 1720864
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

ADAM11
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 87175
gene: ADAM11
product: ADAM metallopeptidase domain 11, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 6 Proteins, and 97% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_030966460.1
SIO_010081: ADAM11
subclass of: SO_0000673
so part of: ADAM11
location: complement(join(1719045..1720549,1720847..1720864,1721269..1721359,1721778..1721892,1723101..1723269,1723357..1723476,1724164..1724263,1724334..1724397,1724939..1724989,1725069..1725149,1725255..1725347,1725430..1725501,1725759..1725858,1726500..1726551,1726649..1726739,1726822..1726906,1726982..1727148,1727605..1727676,1727766..1727840,1728302..1728369,1728456..1728504,1728626..1728692,1728770..1728855,1729208..1729274,1729599..1729675,1730879..1731066,1732204..1732433))
location: region:1719045-1732433:-1
so has part: feature:1732204-1732433:-1:exon
so has part: feature:1730879-1731066:-1:exon
so has part: feature:1729599-1729675:-1:exon
so has part: feature:1729208-1729274:-1:exon
so has part: feature:1728770-1728855:-1:exon
so has part: feature:1728626-1728692:-1:exon
so has part: feature:1728456-1728504:-1:exon
so has part: feature:1728302-1728369:-1:exon
so has part: feature:1727766-1727840:-1:exon
so has part: feature:1727605-1727676:-1:exon
so has part: feature:1726982-1727148:-1:exon
so has part: feature:1726822-1726906:-1:exon
so has part: feature:1726649-1726739:-1:exon
so has part: feature:1726500-1726551:-1:exon
so has part: feature:1725759-1725858:-1:exon
so has part: feature:1725430-1725501:-1:exon
so has part: feature:1725255-1725347:-1:exon
so has part: feature:1725069-1725149:-1:exon
so has part: feature:1724939-1724989:-1:exon
so has part: feature:1724334-1724397:-1:exon
so has part: feature:1724164-1724263:-1:exon
so has part: feature:1723357-1723476:-1:exon
so has part: feature:1723101-1723269:-1:exon
so has part: feature:1721778-1721892:-1:exon
so has part: feature:1721269-1721359:-1:exon
so has part: feature:1720847-1720864:-1:exon
so has part: feature:1719045-1720549:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1732204-1732433:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1730879-1731066:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1729599-1729675:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1729208-1729274:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1728770-1728855:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1728626-1728692:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1728456-1728504:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1728302-1728369:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1727766-1727840:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1727605-1727676:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1726982-1727148:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1726822-1726906:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1726649-1726739:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1726500-1726551:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1725759-1725858:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1725430-1725501:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1725255-1725347:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:1725069-1725149:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:1724939-1724989:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:1724334-1724397:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:1724164-1724263:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:1723357-1723476:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:1723101-1723269:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:1721778-1721892:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:1721269-1721359:-1:exon

position:1721269:-1
position: 1721269
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1721359:-1
position: 1721359
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 26
SIO_000628: feature:1720847-1720864:-1:exon

position:1720847:-1
position: 1720847
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 27
SIO_000628: feature:1719045-1720549:-1:exon

position:1720549:-1
position: 1720549
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

ADAM11
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 87175
gene: ADAM11
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: disintegrin and metalloproteinase domain-containing protein 11 isoform X3
translation: MSPLRGWLLAALLSLAPRAGPASQAGALPRRLPRAAWQEGRVLSQITHPSRLVGQSSGGEVPKHHLDTRVRHEPGGGGGGGPGLHLAQVSFMVRAFGSAFTLDLRLNHHLLASHYVERHVGAGSNGSHSTGAGEHCYYQGRIRGQPRSFAALSSCHGLRGVFSDGRATYLIEPQAGAERGQGLRPHIVQRIPSCPRLGCLFPALSQRVPGGIPKLRRRRQVRRAQHTVHSETKYIELAVVNDHKLFLQLRNSVVLTSNFAKSVVNLADMIYKEQLNTRIVLVAMETWAAEDRIRMGRDSLEILNEFVKYRPEGLAEHSDTVHLFSGHMFHGSRSGTAFVGGICSAARASGVNEYGNVAAMAVTLAQTLGQNVGMMWNKHHTAAGDCRCPDPWLGCIMEDTGYYLPRKFSRCSIDEYNQFLQDGGGSCLFNKPLKLLDPPECGNGFVEAGEECDCGSLAECARSGGNCCKKCTLTHDAMCSNGLCCKGCKYEPRGVSCREAVNECDIPETCTGDSSQCPPNLHKLDGYFCENEQGRCYGGRCKTRDRQCNALWGRSSAERFCYEKLNVEGTERGNCGREGLGWLQCNKQDVLCGFLLCANISGSPRLGELSGEIATTTFYHQNRYVDCRGGHVQLVDGSDLSYVEDGTPCGPGMLCLDRKCLPATAFNFSSCPGSWDGKICFDHGVCSNEGKCICRAEWTGKDCSVYDPIPEPKPTGETERYKGPSGTNIIIGSIAGAVLVAAIVLGGTGWGFKNIRRGRSGGA
SIO_010081: ADAM11
subclass of: SO_0000673
so part of: ADAM11
location: complement(join(1720534..1720549,1720847..1720864,1721269..1721359,1721778..1721892,1723101..1723269,1723357..1723476,1724164..1724263,1724334..1724397,1724939..1724989,1725069..1725149,1725255..1725347,1725430..1725501,1725759..1725858,1726500..1726551,1726649..1726739,1726822..1726906,1726982..1727148,1727605..1727676,1727766..1727840,1728302..1728369,1728456..1728504,1728626..1728692,1728770..1728855,1729208..1729274,1729599..1729675,1730879..1731066,1732204..1732261))
location: region:1720534-1732261:-1
so has part: feature:1732204-1732261:-1:exon
so has part: feature:1730879-1731066:-1:exon
so has part: feature:1729599-1729675:-1:exon
so has part: feature:1729208-1729274:-1:exon
so has part: feature:1728770-1728855:-1:exon
so has part: feature:1728626-1728692:-1:exon
so has part: feature:1728456-1728504:-1:exon
so has part: feature:1728302-1728369:-1:exon
so has part: feature:1727766-1727840:-1:exon
so has part: feature:1727605-1727676:-1:exon
so has part: feature:1726982-1727148:-1:exon
so has part: feature:1726822-1726906:-1:exon
so has part: feature:1726649-1726739:-1:exon
so has part: feature:1726500-1726551:-1:exon
so has part: feature:1725759-1725858:-1:exon
so has part: feature:1725430-1725501:-1:exon
so has part: feature:1725255-1725347:-1:exon
so has part: feature:1725069-1725149:-1:exon
so has part: feature:1724939-1724989:-1:exon
so has part: feature:1724334-1724397:-1:exon
so has part: feature:1724164-1724263:-1:exon
so has part: feature:1723357-1723476:-1:exon
so has part: feature:1723101-1723269:-1:exon
so has part: feature:1721778-1721892:-1:exon
so has part: feature:1721269-1721359:-1:exon
so has part: feature:1720847-1720864:-1:exon
so has part: feature:1720534-1720549:-1:exon

XP_030822320.1
type: Protein
SIO_000068: ncbiprotein

position:1720534:-1
position: 1720534
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1732261:-1
position: 1732261
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1732204-1732261:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1730879-1731066:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1729599-1729675:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1729208-1729274:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1728770-1728855:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1728626-1728692:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1728456-1728504:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1728302-1728369:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1727766-1727840:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1727605-1727676:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1726982-1727148:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1726822-1726906:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1726649-1726739:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1726500-1726551:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1725759-1725858:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1725430-1725501:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1725255-1725347:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:1725069-1725149:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:1724939-1724989:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:1724334-1724397:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:1724164-1724263:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:1723357-1723476:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:1723101-1723269:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:1721778-1721892:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:1721269-1721359:-1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:1720847-1720864:-1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:1720534-1720549:-1:exon

ADAM11
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 87175
gene: ADAM11
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: disintegrin and metalloproteinase domain-containing protein 11 isoform X1
translation: MSPLRGWLLAALLSLAPRAGPASQAGALPRRLPRAAWQEGRVLSQITHPSRLVGQSSGGEVPKHHLDTRVRHEPGGGGGGGPGLHLAQVSFMVRAFGSAFTLDLRLNHHLLASHYVERHVGAGSNGSHSTGAGEHCYYQGRIRGQPRSFAALSSCHGLRGVFSDGRATYLIEPQAGAERGQGLRPHIVQRIPSCPRLGCLFPALSQRVPGGIPKLRRRRQVRRAQHTVHSETKYIELAVVNDHKLFLQLRNSVVLTSNFAKSVVNLADMIYKEQLNTRIVLVAMETWAAEDRIRMGRDSLEILNEFVKYRPEGLAEHSDTVHLFSGHMFHGSRSGTAFVGGICSAARASGVNEYGNVAAMAVTLAQTLGQNVGMMWNKHHTAAGDCRCPDPWLGCIMEDTGYYLPRKFSRCSIDEYNQFLQDGGGSCLFNKPLKLLDPPECGNGFVEAGEECDCGSLAECARSGGNCCKKCTLTHDAMCSNGLCCKGCKYEPRGVSCREAVNECDIPETCTGDSSQCPPNLHKLDGYFCENEQGRCYGGRCKTRDRQCNALWGRSSAERFCYEKLNVEGTERGNCGREGLGWLQCNKQDVLCGFLLCANISGSPRLGELSGEIATTTFYHQNRYVDCRGGHVQLVDGSDLSYVEDGTPCGPGMLCLDRKCLPATAFNFSSCPGSWDGKICFDHGVCSNEGKCICRAEWTGKDCSVYDPIPEPKPTGETERYKGTSAEEGTTRRSRECNRVPPIVPSPSLSPSPSPSGSLTAWEPVCPCAVCPAVLSPSLCPLG
SIO_010081: ADAM11
subclass of: SO_0000673
so part of: ADAM11
location: complement(join(1720680..1720864,1721778..1721892,1723101..1723269,1723357..1723476,1724164..1724263,1724334..1724397,1724939..1724989,1725069..1725149,1725255..1725347,1725430..1725501,1725759..1725858,1726500..1726551,1726649..1726739,1726822..1726906,1726982..1727148,1727605..1727676,1727766..1727840,1728302..1728369,1728456..1728504,1728626..1728692,1728770..1728855,1729208..1729274,1729599..1729675,1730879..1731066,1732204..1732261))
location: region:1720680-1732261:-1
so has part: feature:1732204-1732261:-1:exon
so has part: feature:1730879-1731066:-1:exon
so has part: feature:1729599-1729675:-1:exon
so has part: feature:1729208-1729274:-1:exon
so has part: feature:1728770-1728855:-1:exon
so has part: feature:1728626-1728692:-1:exon
so has part: feature:1728456-1728504:-1:exon
so has part: feature:1728302-1728369:-1:exon
so has part: feature:1727766-1727840:-1:exon
so has part: feature:1727605-1727676:-1:exon
so has part: feature:1726982-1727148:-1:exon
so has part: feature:1726822-1726906:-1:exon
so has part: feature:1726649-1726739:-1:exon
so has part: feature:1726500-1726551:-1:exon
so has part: feature:1725759-1725858:-1:exon
so has part: feature:1725430-1725501:-1:exon
so has part: feature:1725255-1725347:-1:exon
so has part: feature:1725069-1725149:-1:exon
so has part: feature:1724939-1724989:-1:exon
so has part: feature:1724334-1724397:-1:exon
so has part: feature:1724164-1724263:-1:exon
so has part: feature:1723357-1723476:-1:exon
so has part: feature:1723101-1723269:-1:exon
so has part: feature:1721778-1721892:-1:exon
so has part: feature:1720680-1720864:-1:exon

XP_030822318.1
type: Protein
SIO_000068: ncbiprotein

position:1720680:-1
position: 1720680
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1732204-1732261:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1730879-1731066:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1729599-1729675:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1729208-1729274:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1728770-1728855:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1728626-1728692:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1728456-1728504:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1728302-1728369:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1727766-1727840:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1727605-1727676:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1726982-1727148:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1726822-1726906:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1726649-1726739:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1726500-1726551:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1725759-1725858:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1725430-1725501:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1725255-1725347:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:1725069-1725149:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:1724939-1724989:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:1724334-1724397:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:1724164-1724263:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:1723357-1723476:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:1723101-1723269:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:1721778-1721892:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:1720680-1720864:-1:exon

ADAM11
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 87175
gene: ADAM11
product: ADAM metallopeptidase domain 11, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 7 Proteins, and 95% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XM_030966459.1
SIO_010081: ADAM11
subclass of: SO_0000673
so part of: ADAM11
location: complement(join(1720694..1720864,1721269..1721359,1721778..1721892,1723101..1723269,1723357..1723476,1724164..1724263,1724334..1724397,1724939..1724989,1725069..1725149,1725255..1725347,1725430..1725501,1725759..1725858,1726500..1726551,1726649..1726739,1726822..1726906,1726982..1727148,1727605..1727676,1727766..1727840,1728302..1728369,1728456..1728504,1728626..1728692,1728770..1728855,1729208..1729274,1729599..1729675,1730879..1731066,1732204..1732433))
location: region:1720694-1732433:-1
so has part: feature:1732204-1732433:-1:exon
so has part: feature:1730879-1731066:-1:exon
so has part: feature:1729599-1729675:-1:exon
so has part: feature:1729208-1729274:-1:exon
so has part: feature:1728770-1728855:-1:exon
so has part: feature:1728626-1728692:-1:exon
so has part: feature:1728456-1728504:-1:exon
so has part: feature:1728302-1728369:-1:exon
so has part: feature:1727766-1727840:-1:exon
so has part: feature:1727605-1727676:-1:exon
so has part: feature:1726982-1727148:-1:exon
so has part: feature:1726822-1726906:-1:exon
so has part: feature:1726649-1726739:-1:exon
so has part: feature:1726500-1726551:-1:exon
so has part: feature:1725759-1725858:-1:exon
so has part: feature:1725430-1725501:-1:exon
so has part: feature:1725255-1725347:-1:exon
so has part: feature:1725069-1725149:-1:exon
so has part: feature:1724939-1724989:-1:exon
so has part: feature:1724334-1724397:-1:exon
so has part: feature:1724164-1724263:-1:exon
so has part: feature:1723357-1723476:-1:exon
so has part: feature:1723101-1723269:-1:exon
so has part: feature:1721778-1721892:-1:exon
so has part: feature:1721269-1721359:-1:exon
so has part: feature:1720694-1720864:-1:exon

position:1720694:-1
position: 1720694
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1732204-1732433:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1730879-1731066:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1729599-1729675:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1729208-1729274:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1728770-1728855:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1728626-1728692:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1728456-1728504:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1728302-1728369:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1727766-1727840:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1727605-1727676:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1726982-1727148:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1726822-1726906:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1726649-1726739:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1726500-1726551:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1725759-1725858:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1725430-1725501:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1725255-1725347:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:1725069-1725149:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:1724939-1724989:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:1724334-1724397:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:1724164-1724263:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:1723357-1723476:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:1723101-1723269:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:1721778-1721892:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:1721269-1721359:-1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:1720694-1720864:-1:exon

ADAM11
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 87175
gene: ADAM11
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: disintegrin and metalloproteinase domain-containing protein 11 isoform X2
translation: MSPLRGWLLAALLSLAPRAGPASQAGALPRRLPRAAWQEGRVLSQITHPSRLVGQSSGGEVPKHHLDTRVRHEPGGGGGGGPGLHLAQVSFMVRAFGSAFTLDLRLNHHLLASHYVERHVGAGSNGSHSTGAGEHCYYQGRIRGQPRSFAALSSCHGLRGVFSDGRATYLIEPQAGAERGQGLRPHIVQRIPSCPRLGCLFPALSQRVPGGIPKLRRRRQVRRAQHTVHSETKYIELAVVNDHKLFLQLRNSVVLTSNFAKSVVNLADMIYKEQLNTRIVLVAMETWAAEDRIRMGRDSLEILNEFVKYRPEGLAEHSDTVHLFSGHMFHGSRSGTAFVGGICSAARASGVNEYGNVAAMAVTLAQTLGQNVGMMWNKHHTAAGDCRCPDPWLGCIMEDTGYYLPRKFSRCSIDEYNQFLQDGGGSCLFNKPLKLLDPPECGNGFVEAGEECDCGSLAECARSGGNCCKKCTLTHDAMCSNGLCCKGCKYEPRGVSCREAVNECDIPETCTGDSSQCPPNLHKLDGYFCENEQGRCYGGRCKTRDRQCNALWGRSSAERFCYEKLNVEGTERGNCGREGLGWLQCNKQDVLCGFLLCANISGSPRLGELSGEIATTTFYHQNRYVDCRGGHVQLVDGSDLSYVEDGTPCGPGMLCLDRKCLPATAFNFSSCPGSWDGKICFDHGVCSNEGKCICRAEWTGKDCSVYDPIPEPKPTGETERYKGPSGTNIIIGSIAGAVLVAAIVLGGTGWGFKNIRRGRYDPAQQGV
SIO_010081: ADAM11
subclass of: SO_0000673
so part of: ADAM11
location: complement(join(1720819..1720864,1721269..1721359,1721778..1721892,1723101..1723269,1723357..1723476,1724164..1724263,1724334..1724397,1724939..1724989,1725069..1725149,1725255..1725347,1725430..1725501,1725759..1725858,1726500..1726551,1726649..1726739,1726822..1726906,1726982..1727148,1727605..1727676,1727766..1727840,1728302..1728369,1728456..1728504,1728626..1728692,1728770..1728855,1729208..1729274,1729599..1729675,1730879..1731066,1732204..1732261))
location: region:1720819-1732261:-1
so has part: feature:1732204-1732261:-1:exon
so has part: feature:1730879-1731066:-1:exon
so has part: feature:1729599-1729675:-1:exon
so has part: feature:1729208-1729274:-1:exon
so has part: feature:1728770-1728855:-1:exon
so has part: feature:1728626-1728692:-1:exon
so has part: feature:1728456-1728504:-1:exon
so has part: feature:1728302-1728369:-1:exon
so has part: feature:1727766-1727840:-1:exon
so has part: feature:1727605-1727676:-1:exon
so has part: feature:1726982-1727148:-1:exon
so has part: feature:1726822-1726906:-1:exon
so has part: feature:1726649-1726739:-1:exon
so has part: feature:1726500-1726551:-1:exon
so has part: feature:1725759-1725858:-1:exon
so has part: feature:1725430-1725501:-1:exon
so has part: feature:1725255-1725347:-1:exon
so has part: feature:1725069-1725149:-1:exon
so has part: feature:1724939-1724989:-1:exon
so has part: feature:1724334-1724397:-1:exon
so has part: feature:1724164-1724263:-1:exon
so has part: feature:1723357-1723476:-1:exon
so has part: feature:1723101-1723269:-1:exon
so has part: feature:1721778-1721892:-1:exon
so has part: feature:1721269-1721359:-1:exon
so has part: feature:1720819-1720864:-1:exon

XP_030822319.1
type: Protein
SIO_000068: ncbiprotein

position:1720819:-1
position: 1720819
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1732204-1732261:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1730879-1731066:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1729599-1729675:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1729208-1729274:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1728770-1728855:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1728626-1728692:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1728456-1728504:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1728302-1728369:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1727766-1727840:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1727605-1727676:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1726982-1727148:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1726822-1726906:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1726649-1726739:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1726500-1726551:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1725759-1725858:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1725430-1725501:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1725255-1725347:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:1725069-1725149:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:1724939-1724989:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:1724334-1724397:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:1724164-1724263:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:1723357-1723476:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:1723101-1723269:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:1721778-1721892:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:1721269-1721359:-1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:1720819-1720864:-1:exon

DBF4B
type: Gene
subclass of: SO_0000704
RO_0002162: 87175
gene: DBF4B
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1734946..1746324)
location: region:1734946-1746324:-1
so has part: feature:1734946-1746324:-1:exon
subclass of: SO_0000010

115914113
type: Gene
SIO_000068: ncbigene

position:1734946:-1
position: 1734946
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1746324:-1
position: 1746324
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1734946-1746324:-1:exon

DBF4B
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 87175
gene: DBF4B
product: DBF4 zinc finger B
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XM_030966466.1
SIO_010081: DBF4B
subclass of: SO_0000673
so part of: DBF4B
location: complement(join(1734946..1736649,1737126..1737235,1737824..1737950,1738103..1738219,1739084..1739126,1740989..1741025,1741710..1741780,1742581..1742650,1743234..1743284,1744818..1745009,1746010..1746324))
location: region:1734946-1746324:-1
so has part: feature:1746010-1746324:-1:exon
so has part: feature:1744818-1745009:-1:exon
so has part: feature:1743234-1743284:-1:exon
so has part: feature:1742581-1742650:-1:exon
so has part: feature:1741710-1741780:-1:exon
so has part: feature:1740989-1741025:-1:exon
so has part: feature:1739084-1739126:-1:exon
so has part: feature:1738103-1738219:-1:exon
so has part: feature:1737824-1737950:-1:exon
so has part: feature:1737126-1737235:-1:exon
so has part: feature:1734946-1736649:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1746010-1746324:-1:exon

position:1746010:-1
position: 1746010
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1744818-1745009:-1:exon

position:1744818:-1
position: 1744818
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1745009:-1
position: 1745009
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1743234-1743284:-1:exon

position:1743234:-1
position: 1743234
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1743284:-1
position: 1743284
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1742581-1742650:-1:exon

position:1742581:-1
position: 1742581
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1742650:-1
position: 1742650
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1741710-1741780:-1:exon

position:1741710:-1
position: 1741710
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1741780:-1
position: 1741780
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1740989-1741025:-1:exon

position:1740989:-1
position: 1740989
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1741025:-1
position: 1741025
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1739084-1739126:-1:exon

position:1739084:-1
position: 1739084
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1739126:-1
position: 1739126
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1738103-1738219:-1:exon

position:1738103:-1
position: 1738103
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1738219:-1
position: 1738219
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:1737824-1737950:-1:exon

position:1737824:-1
position: 1737824
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1737950:-1
position: 1737950
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:1737126-1737235:-1:exon

position:1737126:-1
position: 1737126
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1737235:-1
position: 1737235
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:1734946-1736649:-1:exon

position:1736649:-1
position: 1736649
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

DBF4B
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 87175
gene: DBF4B
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protein DBF4 homolog B
translation: MASAASPRPLRGQSFYLDLPSGRSARDLAEAIGRLGGVTESFLSKEITCVVSSSREAKRGQPRAREEKQNNPTAESTKSTSSVPAAPKGTPTRAHQKPPYTALLSRGKELLNKAMKNQDTCSGSSILANARLWGVQILHVDEMLSYAQQLLRAISGARKQCQKTEVKCPASRSKIHKGKLKPPFLKVEDQSRQFRPFHHQFQSFPALNFLAPKSSSPFEPLKILSDSCQARGAEGCALHSTGGKSPRSTHVTVPRKRRGFCECCQETFEELQKHLLSPQHQRFAQDSSQYIPVDRVISQLTNSFVEGSAKVPWSCLADERVVPQAHSTGGMKLLPAELGREGEQPEQDAVELITDTELDHGLKTQGNSPCLPRGRVTDPRGGGDLSKHSSLQLPRGAGLSRGVCAAHGALGEAGLGASGLGLAPELGWGPRAAPTPVREAMASSCEPVSHPPQAQAASRKRQLCSRPSSQVAKRPRLELGSGLSPLGEQMELVGGGMGAQRAGQVSEPALPLGTELSSRPHSSLALDLCLCESPGDPVSQPGSPGAVAAGWDAGEAAAASTVSEHGWSRDRSQGKQHRGDSDSTPRDGNRPALEGKTSRTSCPAGCLPSPALPVAAARCCCSVRAAEAAAPGAPGLLPPAPQGPEAAPGFSRSSSRSDWDVQLLPSLPGVQGCRFPAVDRDLLQQPQGRVRDSGYESQLCSVLREAELDKSCRNCCTETRGASLPILGTLFGS
SIO_010081: DBF4B
subclass of: SO_0000673
so part of: DBF4B
location: complement(join(1735377..1736649,1737126..1737235,1737824..1737950,1738103..1738219,1739084..1739126,1740989..1741025,1741710..1741780,1742581..1742650,1743234..1743284,1744818..1745009,1746010..1746120))
location: region:1735377-1746120:-1
so has part: feature:1746010-1746120:-1:exon
so has part: feature:1744818-1745009:-1:exon
so has part: feature:1743234-1743284:-1:exon
so has part: feature:1742581-1742650:-1:exon
so has part: feature:1741710-1741780:-1:exon
so has part: feature:1740989-1741025:-1:exon
so has part: feature:1739084-1739126:-1:exon
so has part: feature:1738103-1738219:-1:exon
so has part: feature:1737824-1737950:-1:exon
so has part: feature:1737126-1737235:-1:exon
so has part: feature:1735377-1736649:-1:exon

XP_030822326.1
type: Protein
SIO_000068: ncbiprotein

position:1735377:-1
position: 1735377
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1746120:-1
position: 1746120
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1746010-1746120:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1744818-1745009:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1743234-1743284:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1742581-1742650:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1741710-1741780:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1740989-1741025:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1739084-1739126:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1738103-1738219:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1737824-1737950:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1737126-1737235:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1735377-1736649:-1:exon

CCDC43
type: Gene
subclass of: SO_0000704
RO_0002162: 87175
gene: CCDC43
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1746179..1756133
location: region:1746179-1756133:1
so has part: feature:1746179-1756133:1:exon
subclass of: SO_0000010

115914114
type: Gene
SIO_000068: ncbigene

position:1746179:1
position: 1746179
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1756133:1
position: 1756133
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1746179-1756133:1:exon

CCDC43
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 87175
gene: CCDC43
product: coiled-coil domain containing 43
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 ESTs, 7 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
transcript id: XM_030966467.1
SIO_010081: CCDC43
subclass of: SO_0000673
so part of: CCDC43
location: join(1746179..1746677,1750665..1750752,1752849..1752984,1753549..1753604,1754871..1756133)
location: region:1746179-1756133:1
so has part: feature:1746179-1746677:1:exon
so has part: feature:1750665-1750752:1:exon
so has part: feature:1752849-1752984:1:exon
so has part: feature:1753549-1753604:1:exon
so has part: feature:1754871-1756133:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1746179-1746677:1:exon

position:1746677:1
position: 1746677
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1750665-1750752:1:exon