Camarhynchus parvulus chromosome 24, STF_HiC, whole genome shotgun sequence.
type: Entry
definition: Camarhynchus parvulus chromosome 24, STF_HiC, whole genome shotgun sequence.
sequence version: NC_044594.1
sequence date: 2019-09-26
sequence: sequence
division: CON
label: NC_044594.1
type: RefSeq
SIO_000068: refseq
dblink: PRJNA566393
dblink: SAMEA5603054
keyword: WGS
keyword: RefSeq
source: Camarhynchus parvulus
organism: Camarhynchus parvulus
taxonomy: Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Passeriformes; Thraupidae; Camarhynchus.
comment: REFSEQ INFORMATION: The reference sequence is identical to\nLR595718.1.\nAssembly name: STF_HiC\nThe genomic sequence for this RefSeq record is from the\nwhole-genome assembly released by the UPPSALA UNIVERISTY on\n2019/09/06. The original whole-genome shotgun project has the\naccession CABFNF000000000.1.\n\n##Genome-Annotation-Data-START##\nAnnotation Provider :: NCBI\nAnnotation Status :: Full annotation\nAnnotation Name :: Camarhynchus parvulus Annotation\n Release 100\nAnnotation Version :: 100\nAnnotation Pipeline :: NCBI eukaryotic genome annotation\n pipeline\nAnnotation Software Version :: 8.2\nAnnotation Method :: Best-placed RefSeq; Gnomon\nFeatures Annotated :: Gene; mRNA; CDS; ncRNA\n##Genome-Annotation-Data-END##

sequence
subclass of: SO_0000340
sequence length: 7720073
topology: linear
so has quality: SO_0000987
location: 1..7720073
location: region:1-7720073:1
RO_0002162: 87175

NC_044594
type: RefSeq
SIO_000068: refseq

PRJNA566393
type: BioProject
SIO_000068: bioproject

SAMEA5603054
type: BioSample
SIO_000068: biosample

position:1:1
position: 1
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7720073:1
position: 7720073
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

feature:1-7720073:1:source
so part of: sequence
organism: Camarhynchus parvulus
mol type: genomic DNA
chromosome: 24

87175
type: Taxonomy
SIO_000068: taxonomy

C2CD2L
type: Gene
subclass of: SO_0000704
RO_0002162: 87175
gene: C2CD2L
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(3193..22669)
location: region:3193-22669:-1
so has part: feature:3193-22669:-1:exon
subclass of: SO_0000010

115913016
type: Gene
SIO_000068: ncbigene

position:3193:-1
position: 3193
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:22669:-1
position: 22669
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3193-22669:-1:exon

C2CD2L
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 87175
gene: C2CD2L
product: C2CD2 like, transcript variant X5
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_030964863.1
SIO_010081: C2CD2L
subclass of: SO_0000673
so part of: C2CD2L
location: complement(join(3193..8800,10219..10501,10999..11132,11761..11862,13204..13375,13678..13805,14397..14461,14978..15101,15265..15382,16001..16117,16956..17066,18968..19087,19461..19556,22280..22669))
location: region:3193-22669:-1
so has part: feature:22280-22669:-1:exon
so has part: feature:19461-19556:-1:exon
so has part: feature:18968-19087:-1:exon
so has part: feature:16956-17066:-1:exon
so has part: feature:16001-16117:-1:exon
so has part: feature:15265-15382:-1:exon
so has part: feature:14978-15101:-1:exon
so has part: feature:14397-14461:-1:exon
so has part: feature:13678-13805:-1:exon
so has part: feature:13204-13375:-1:exon
so has part: feature:11761-11862:-1:exon
so has part: feature:10999-11132:-1:exon
so has part: feature:10219-10501:-1:exon
so has part: feature:3193-8800:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:22280-22669:-1:exon

position:22280:-1
position: 22280
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:19461-19556:-1:exon

position:19461:-1
position: 19461
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:19556:-1
position: 19556
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:18968-19087:-1:exon

position:18968:-1
position: 18968
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:19087:-1
position: 19087
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:16956-17066:-1:exon

position:16956:-1
position: 16956
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:17066:-1
position: 17066
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:16001-16117:-1:exon

position:16001:-1
position: 16001
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:16117:-1
position: 16117
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:15265-15382:-1:exon

position:15265:-1
position: 15265
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:15382:-1
position: 15382
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:14978-15101:-1:exon

position:14978:-1
position: 14978
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:15101:-1
position: 15101
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:14397-14461:-1:exon

position:14397:-1
position: 14397
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:14461:-1
position: 14461
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:13678-13805:-1:exon

position:13678:-1
position: 13678
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:13805:-1
position: 13805
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:13204-13375:-1:exon

position:13204:-1
position: 13204
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:13375:-1
position: 13375
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:11761-11862:-1:exon

position:11761:-1
position: 11761
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:11862:-1
position: 11862
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:10999-11132:-1:exon

position:10999:-1
position: 10999
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:11132:-1
position: 11132
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:10219-10501:-1:exon

position:10219:-1
position: 10219
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:10501:-1
position: 10501
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:3193-8800:-1:exon

position:8800:-1
position: 8800
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

C2CD2L
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 87175
gene: C2CD2L
product: C2CD2 like, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_030964861.1
SIO_010081: C2CD2L
subclass of: SO_0000673
so part of: C2CD2L
location: complement(join(3193..8800,10219..10501,10999..11132,11761..11862,13204..13375,13678..13805,14397..14461,14978..15101,15265..15382,16001..16117,16956..17066,18968..19087,19461..19556,22174..22283))
location: region:3193-22283:-1
so has part: feature:22174-22283:-1:exon
so has part: feature:19461-19556:-1:exon
so has part: feature:18968-19087:-1:exon
so has part: feature:16956-17066:-1:exon
so has part: feature:16001-16117:-1:exon
so has part: feature:15265-15382:-1:exon
so has part: feature:14978-15101:-1:exon
so has part: feature:14397-14461:-1:exon
so has part: feature:13678-13805:-1:exon
so has part: feature:13204-13375:-1:exon
so has part: feature:11761-11862:-1:exon
so has part: feature:10999-11132:-1:exon
so has part: feature:10219-10501:-1:exon
so has part: feature:3193-8800:-1:exon

position:22283:-1
position: 22283
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:22174-22283:-1:exon

position:22174:-1
position: 22174
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:19461-19556:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:18968-19087:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:16956-17066:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:16001-16117:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:15265-15382:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:14978-15101:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:14397-14461:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:13678-13805:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:13204-13375:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:11761-11862:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:10999-11132:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:10219-10501:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:3193-8800:-1:exon

C2CD2L
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 87175
gene: C2CD2L
product: C2CD2 like, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 ESTs, 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XM_030964860.1
SIO_010081: C2CD2L
subclass of: SO_0000673
so part of: C2CD2L
location: complement(join(3193..8800,10219..10501,10999..11132,11761..11862,13204..13375,13678..13805,14397..14461,14978..15101,15265..15382,16001..16114,16956..17066,18968..19087,19461..19556,20875..21210))
location: region:3193-21210:-1
so has part: feature:20875-21210:-1:exon
so has part: feature:19461-19556:-1:exon
so has part: feature:18968-19087:-1:exon
so has part: feature:16956-17066:-1:exon
so has part: feature:16001-16114:-1:exon
so has part: feature:15265-15382:-1:exon
so has part: feature:14978-15101:-1:exon
so has part: feature:14397-14461:-1:exon
so has part: feature:13678-13805:-1:exon
so has part: feature:13204-13375:-1:exon
so has part: feature:11761-11862:-1:exon
so has part: feature:10999-11132:-1:exon
so has part: feature:10219-10501:-1:exon
so has part: feature:3193-8800:-1:exon

position:21210:-1
position: 21210
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:20875-21210:-1:exon

position:20875:-1
position: 20875
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:19461-19556:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:18968-19087:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:16956-17066:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:16001-16114:-1:exon

position:16114:-1
position: 16114
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:15265-15382:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:14978-15101:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:14397-14461:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:13678-13805:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:13204-13375:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:11761-11862:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:10999-11132:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:10219-10501:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:3193-8800:-1:exon

C2CD2L
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 87175
gene: C2CD2L
product: C2CD2 like, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XM_030964859.1
SIO_010081: C2CD2L
subclass of: SO_0000673
so part of: C2CD2L
location: complement(join(3193..8800,10219..10501,10999..11132,11761..11862,13204..13375,13678..13805,14397..14461,14978..15101,15265..15382,16001..16117,16956..17066,18968..19087,19461..19556,20875..21210))
location: region:3193-21210:-1
so has part: feature:20875-21210:-1:exon
so has part: feature:19461-19556:-1:exon
so has part: feature:18968-19087:-1:exon
so has part: feature:16956-17066:-1:exon
so has part: feature:16001-16117:-1:exon
so has part: feature:15265-15382:-1:exon
so has part: feature:14978-15101:-1:exon
so has part: feature:14397-14461:-1:exon
so has part: feature:13678-13805:-1:exon
so has part: feature:13204-13375:-1:exon
so has part: feature:11761-11862:-1:exon
so has part: feature:10999-11132:-1:exon
so has part: feature:10219-10501:-1:exon
so has part: feature:3193-8800:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:20875-21210:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:19461-19556:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:18968-19087:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:16956-17066:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:16001-16117:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:15265-15382:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:14978-15101:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:14397-14461:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:13678-13805:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:13204-13375:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:11761-11862:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:10999-11132:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:10219-10501:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:3193-8800:-1:exon

C2CD2L
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 87175
gene: C2CD2L
product: C2CD2 like, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_030964862.1
SIO_010081: C2CD2L
subclass of: SO_0000673
so part of: C2CD2L
location: complement(join(3193..8800,10219..10501,10999..11132,11761..11862,13204..13375,13678..13805,14397..14461,14978..15101,15265..15382,16001..16117,16956..17066,18968..19087,19461..19556,19688..21009))
location: region:3193-21009:-1
so has part: feature:19688-21009:-1:exon
so has part: feature:19461-19556:-1:exon
so has part: feature:18968-19087:-1:exon
so has part: feature:16956-17066:-1:exon
so has part: feature:16001-16117:-1:exon
so has part: feature:15265-15382:-1:exon
so has part: feature:14978-15101:-1:exon
so has part: feature:14397-14461:-1:exon
so has part: feature:13678-13805:-1:exon
so has part: feature:13204-13375:-1:exon
so has part: feature:11761-11862:-1:exon
so has part: feature:10999-11132:-1:exon
so has part: feature:10219-10501:-1:exon
so has part: feature:3193-8800:-1:exon

position:21009:-1
position: 21009
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:19688-21009:-1:exon

position:19688:-1
position: 19688
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:19461-19556:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:18968-19087:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:16956-17066:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:16001-16117:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:15265-15382:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:14978-15101:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:14397-14461:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:13678-13805:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:13204-13375:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:11761-11862:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:10999-11132:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:10219-10501:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:3193-8800:-1:exon

C2CD2L
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 87175
gene: C2CD2L
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: phospholipid transfer protein C2CD2L isoform X3
translation: MREMGKSSVQITFEEGPQLPQAANIGCVTCKGQSDHSMVLWCHLSAEAVKFPVSVTQQSPVAVSVDTYHVTLAVLQAQVEIHLEEIQNEGLLVSWTFKDRPDLDVFVLPRLGLPEKDEGRADLSTIKDLVEDTIVSTKPAMMVNLVACTAGASAVPSNKLTRESPSRVATAPLGSKLLLRNLRVLNLGCQGKGGVGEIRCMAELDSPPQQKWTRPVIDGSVGAAGEMEWNDEFFLELGPRSKELKLQVLRSSNGGGNVLLAYATLLIDSLDKQPSGRRVCSLTPGAGQSLTAEATITLELLFQESPASLNAPHATSLRTSITPTKKVEMDRTIMPDGTIVTTVTTIQSRPKADCKLDSPSRSPSKVEVTEKKTTVLLETGRPHGHLPSSCRDSHLPNGLDPVAETAIRQLTETNNKTTKKTPTKRSTLIISGVSKVPIAQDEMALSLGYAASLEARAYGDSEADSTADQMHDFTQLSRPLEALPLGQRDSQELDETTRSDVSERPSVEDVESETGSTGALETRSLKDHKVSFLRSGTKLIFRRRSKQKEAGLSQSHDDLSNVTANSTTRKKTGSFSHRLIKRFSFKSKSKLKGSDNTSAGEN
SIO_010081: C2CD2L
subclass of: SO_0000673
so part of: C2CD2L
location: complement(join(8580..8800,10219..10501,10999..11132,11761..11862,13204..13375,13678..13805,14397..14461,14978..15101,15265..15382,16001..16117,16956..17066,18968..19087,19461..19556,22174..22191))
location: region:8580-22191:-1
so has part: feature:22174-22191:-1:exon
so has part: feature:19461-19556:-1:exon
so has part: feature:18968-19087:-1:exon
so has part: feature:16956-17066:-1:exon
so has part: feature:16001-16117:-1:exon
so has part: feature:15265-15382:-1:exon
so has part: feature:14978-15101:-1:exon
so has part: feature:14397-14461:-1:exon
so has part: feature:13678-13805:-1:exon
so has part: feature:13204-13375:-1:exon
so has part: feature:11761-11862:-1:exon
so has part: feature:10999-11132:-1:exon
so has part: feature:10219-10501:-1:exon
so has part: feature:8580-8800:-1:exon

XP_030820721.1
type: Protein
SIO_000068: ncbiprotein

position:8580:-1
position: 8580
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:22191:-1
position: 22191
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:22174-22191:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:19461-19556:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:18968-19087:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:16956-17066:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:16001-16117:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:15265-15382:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:14978-15101:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:14397-14461:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:13678-13805:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:13204-13375:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:11761-11862:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:10999-11132:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:10219-10501:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:8580-8800:-1:exon

C2CD2L
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 87175
gene: C2CD2L
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: phospholipid transfer protein C2CD2L isoform X2
translation: MGPDLGWAALVLLFAASLLTVAAWLLQYWRSTALRALRRRGAAGEEAGARALLAALLALRSLREQWQRAWVRALNSQARRHGSSVQITFEEGPQLPQAANIGCVTCKGQSDHSMVLWCHLSAEAVKFPVSVTQQSPVAVSVDTYHVTLAVLQAQVEIHLEEIQNEGLLVSWTFKDRPDLDVFVLPRLGLPEDEGRADLSTIKDLVEDTIVSTKPAMMVNLVACTAGASAVPSNKLTRESPSRVATAPLGSKLLLRNLRVLNLGCQGKGGVGEIRCMAELDSPPQQKWTRPVIDGSVGAAGEMEWNDEFFLELGPRSKELKLQVLRSSNGGGNVLLAYATLLIDSLDKQPSGRRVCSLTPGAGQSLTAEATITLELLFQESPASLNAPHATSLRTSITPTKKVEMDRTIMPDGTIVTTVTTIQSRPKADCKLDSPSRSPSKVEVTEKKTTVLLETGRPHGHLPSSCRDSHLPNGLDPVAETAIRQLTETNNKTTKKTPTKRSTLIISGVSKVPIAQDEMALSLGYAASLEARAYGDSEADSTADQMHDFTQLSRPLEALPLGQRDSQELDETTRSDVSERPSVEDVESETGSTGALETRSLKDHKVSFLRSGTKLIFRRRSKQKEAGLSQSHDDLSNVTANSTTRKKTGSFSHRLIKRFSFKSKSKLKGSDNTSAGEN
SIO_010081: C2CD2L
subclass of: SO_0000673
so part of: C2CD2L
location: complement(join(8580..8800,10219..10501,10999..11132,11761..11862,13204..13375,13678..13805,14397..14461,14978..15101,15265..15382,16001..16114,16956..17066,18968..19087,19461..19556,20875..21120))
location: region:8580-21120:-1
so has part: feature:20875-21120:-1:exon
so has part: feature:19461-19556:-1:exon
so has part: feature:18968-19087:-1:exon
so has part: feature:16956-17066:-1:exon
so has part: feature:16001-16114:-1:exon
so has part: feature:15265-15382:-1:exon
so has part: feature:14978-15101:-1:exon
so has part: feature:14397-14461:-1:exon
so has part: feature:13678-13805:-1:exon
so has part: feature:13204-13375:-1:exon
so has part: feature:11761-11862:-1:exon
so has part: feature:10999-11132:-1:exon
so has part: feature:10219-10501:-1:exon
so has part: feature:8580-8800:-1:exon

XP_030820720.1
type: Protein
SIO_000068: ncbiprotein

position:21120:-1
position: 21120
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:20875-21120:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:19461-19556:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:18968-19087:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:16956-17066:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:16001-16114:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:15265-15382:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:14978-15101:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:14397-14461:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:13678-13805:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:13204-13375:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:11761-11862:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:10999-11132:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:10219-10501:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:8580-8800:-1:exon

C2CD2L
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 87175
gene: C2CD2L
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: phospholipid transfer protein C2CD2L isoform X1
translation: MGPDLGWAALVLLFAASLLTVAAWLLQYWRSTALRALRRRGAAGEEAGARALLAALLALRSLREQWQRAWVRALNSQARRHGSSVQITFEEGPQLPQAANIGCVTCKGQSDHSMVLWCHLSAEAVKFPVSVTQQSPVAVSVDTYHVTLAVLQAQVEIHLEEIQNEGLLVSWTFKDRPDLDVFVLPRLGLPEKDEGRADLSTIKDLVEDTIVSTKPAMMVNLVACTAGASAVPSNKLTRESPSRVATAPLGSKLLLRNLRVLNLGCQGKGGVGEIRCMAELDSPPQQKWTRPVIDGSVGAAGEMEWNDEFFLELGPRSKELKLQVLRSSNGGGNVLLAYATLLIDSLDKQPSGRRVCSLTPGAGQSLTAEATITLELLFQESPASLNAPHATSLRTSITPTKKVEMDRTIMPDGTIVTTVTTIQSRPKADCKLDSPSRSPSKVEVTEKKTTVLLETGRPHGHLPSSCRDSHLPNGLDPVAETAIRQLTETNNKTTKKTPTKRSTLIISGVSKVPIAQDEMALSLGYAASLEARAYGDSEADSTADQMHDFTQLSRPLEALPLGQRDSQELDETTRSDVSERPSVEDVESETGSTGALETRSLKDHKVSFLRSGTKLIFRRRSKQKEAGLSQSHDDLSNVTANSTTRKKTGSFSHRLIKRFSFKSKSKLKGSDNTSAGEN
SIO_010081: C2CD2L
subclass of: SO_0000673
so part of: C2CD2L
location: complement(join(8580..8800,10219..10501,10999..11132,11761..11862,13204..13375,13678..13805,14397..14461,14978..15101,15265..15382,16001..16117,16956..17066,18968..19087,19461..19556,20875..21120))
location: region:8580-21120:-1
so has part: feature:20875-21120:-1:exon
so has part: feature:19461-19556:-1:exon
so has part: feature:18968-19087:-1:exon
so has part: feature:16956-17066:-1:exon
so has part: feature:16001-16117:-1:exon
so has part: feature:15265-15382:-1:exon
so has part: feature:14978-15101:-1:exon
so has part: feature:14397-14461:-1:exon
so has part: feature:13678-13805:-1:exon
so has part: feature:13204-13375:-1:exon
so has part: feature:11761-11862:-1:exon
so has part: feature:10999-11132:-1:exon
so has part: feature:10219-10501:-1:exon
so has part: feature:8580-8800:-1:exon

XP_030820719.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:20875-21120:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:19461-19556:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:18968-19087:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:16956-17066:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:16001-16117:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:15265-15382:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:14978-15101:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:14397-14461:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:13678-13805:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:13204-13375:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:11761-11862:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:10999-11132:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:10219-10501:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:8580-8800:-1:exon

C2CD2L
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 87175
gene: C2CD2L
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: phospholipid transfer protein C2CD2L isoform X4
translation: MVLWCHLSAEAVKFPVSVTQQSPVAVSVDTYHVTLAVLQAQVEIHLEEIQNEGLLVSWTFKDRPDLDVFVLPRLGLPEKDEGRADLSTIKDLVEDTIVSTKPAMMVNLVACTAGASAVPSNKLTRESPSRVATAPLGSKLLLRNLRVLNLGCQGKGGVGEIRCMAELDSPPQQKWTRPVIDGSVGAAGEMEWNDEFFLELGPRSKELKLQVLRSSNGGGNVLLAYATLLIDSLDKQPSGRRVCSLTPGAGQSLTAEATITLELLFQESPASLNAPHATSLRTSITPTKKVEMDRTIMPDGTIVTTVTTIQSRPKADCKLDSPSRSPSKVEVTEKKTTVLLETGRPHGHLPSSCRDSHLPNGLDPVAETAIRQLTETNNKTTKKTPTKRSTLIISGVSKVPIAQDEMALSLGYAASLEARAYGDSEADSTADQMHDFTQLSRPLEALPLGQRDSQELDETTRSDVSERPSVEDVESETGSTGALETRSLKDHKVSFLRSGTKLIFRRRSKQKEAGLSQSHDDLSNVTANSTTRKKTGSFSHRLIKRFSFKSKSKLKGSDNTSAGEN
SIO_010081: C2CD2L
subclass of: SO_0000673
so part of: C2CD2L
location: complement(join(8580..8800,10219..10501,10999..11132,11761..11862,13204..13375,13678..13805,14397..14461,14978..15101,15265..15382,16001..16117,16956..17066,18968..19087,19461..19463))
location: region:8580-19463:-1
so has part: feature:19461-19463:-1:exon
so has part: feature:18968-19087:-1:exon
so has part: feature:16956-17066:-1:exon
so has part: feature:16001-16117:-1:exon
so has part: feature:15265-15382:-1:exon
so has part: feature:14978-15101:-1:exon
so has part: feature:14397-14461:-1:exon
so has part: feature:13678-13805:-1:exon
so has part: feature:13204-13375:-1:exon
so has part: feature:11761-11862:-1:exon
so has part: feature:10999-11132:-1:exon
so has part: feature:10219-10501:-1:exon
so has part: feature:8580-8800:-1:exon

XP_030820722.1
type: Protein
SIO_000068: ncbiprotein

position:19463:-1
position: 19463
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:19461-19463:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:18968-19087:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:16956-17066:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:16001-16117:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:15265-15382:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:14978-15101:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:14397-14461:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:13678-13805:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:13204-13375:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:11761-11862:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:10999-11132:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:10219-10501:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:8580-8800:-1:exon

C2CD2L
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 87175
gene: C2CD2L
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: phospholipid transfer protein C2CD2L isoform X4
translation: MVLWCHLSAEAVKFPVSVTQQSPVAVSVDTYHVTLAVLQAQVEIHLEEIQNEGLLVSWTFKDRPDLDVFVLPRLGLPEKDEGRADLSTIKDLVEDTIVSTKPAMMVNLVACTAGASAVPSNKLTRESPSRVATAPLGSKLLLRNLRVLNLGCQGKGGVGEIRCMAELDSPPQQKWTRPVIDGSVGAAGEMEWNDEFFLELGPRSKELKLQVLRSSNGGGNVLLAYATLLIDSLDKQPSGRRVCSLTPGAGQSLTAEATITLELLFQESPASLNAPHATSLRTSITPTKKVEMDRTIMPDGTIVTTVTTIQSRPKADCKLDSPSRSPSKVEVTEKKTTVLLETGRPHGHLPSSCRDSHLPNGLDPVAETAIRQLTETNNKTTKKTPTKRSTLIISGVSKVPIAQDEMALSLGYAASLEARAYGDSEADSTADQMHDFTQLSRPLEALPLGQRDSQELDETTRSDVSERPSVEDVESETGSTGALETRSLKDHKVSFLRSGTKLIFRRRSKQKEAGLSQSHDDLSNVTANSTTRKKTGSFSHRLIKRFSFKSKSKLKGSDNTSAGEN
SIO_010081: C2CD2L
subclass of: SO_0000673
so part of: C2CD2L
location: complement(join(8580..8800,10219..10501,10999..11132,11761..11862,13204..13375,13678..13805,14397..14461,14978..15101,15265..15382,16001..16117,16956..17066,18968..19087,19461..19463))
location: region:8580-19463:-1
so has part: feature:19461-19463:-1:exon
so has part: feature:18968-19087:-1:exon
so has part: feature:16956-17066:-1:exon
so has part: feature:16001-16117:-1:exon
so has part: feature:15265-15382:-1:exon
so has part: feature:14978-15101:-1:exon
so has part: feature:14397-14461:-1:exon
so has part: feature:13678-13805:-1:exon
so has part: feature:13204-13375:-1:exon
so has part: feature:11761-11862:-1:exon
so has part: feature:10999-11132:-1:exon
so has part: feature:10219-10501:-1:exon
so has part: feature:8580-8800:-1:exon

XP_030820723.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:19461-19463:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:18968-19087:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:16956-17066:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:16001-16117:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:15265-15382:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:14978-15101:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:14397-14461:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:13678-13805:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:13204-13375:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:11761-11862:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:10999-11132:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:10219-10501:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:8580-8800:-1:exon

DPAGT1
type: Gene
subclass of: SO_0000704
RO_0002162: 87175
gene: DPAGT1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 22427..28266
location: region:22427-28266:1
so has part: feature:22427-28266:1:exon
subclass of: SO_0000010

115913017
type: Gene
SIO_000068: ncbigene

position:22427:1
position: 22427
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:28266:1
position: 28266
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:22427-28266:1:exon

DPAGT1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 87175
gene: DPAGT1
product: dolichyl-phosphate N-acetylglucosaminephosphotransferase 1, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_030964865.1
SIO_010081: DPAGT1
subclass of: SO_0000673
so part of: DPAGT1
location: join(22427..22963,23041..23161,23247..23460,23980..24126,24259..24343,24794..24982,25567..25654,27347..28266)
location: region:22427-28266:1
so has part: feature:22427-22963:1:exon
so has part: feature:23041-23161:1:exon
so has part: feature:23247-23460:1:exon
so has part: feature:23980-24126:1:exon
so has part: feature:24259-24343:1:exon
so has part: feature:24794-24982:1:exon
so has part: feature:25567-25654:1:exon
so has part: feature:27347-28266:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:22427-22963:1:exon

position:22963:1
position: 22963
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:23041-23161:1:exon

position:23041:1
position: 23041
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:23161:1
position: 23161
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:23247-23460:1:exon

position:23247:1
position: 23247
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:23460:1
position: 23460
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:23980-24126:1:exon

position:23980:1
position: 23980
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:24126:1
position: 24126
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:24259-24343:1:exon

position:24259:1
position: 24259
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:24343:1
position: 24343
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:24794-24982:1:exon

position:24794:1
position: 24794
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:24982:1
position: 24982
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:25567-25654:1:exon

position:25567:1
position: 25567
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:25654:1
position: 25654
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:27347-28266:1:exon

position:27347:1
position: 27347
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

DPAGT1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 87175
gene: DPAGT1
product: dolichyl-phosphate N-acetylglucosaminephosphotransferase 1, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 8 ESTs, 16 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
transcript id: XM_030964864.1
SIO_010081: DPAGT1
subclass of: SO_0000673
so part of: DPAGT1
location: join(22427..22963,23041..23161,23247..23460,23980..24126,24259..24343,24794..24982,25567..25654,26003..26158,27347..27817)
location: region:22427-27817:1
so has part: feature:22427-22963:1:exon
so has part: feature:23041-23161:1:exon
so has part: feature:23247-23460:1:exon
so has part: feature:23980-24126:1:exon
so has part: feature:24259-24343:1:exon
so has part: feature:24794-24982:1:exon
so has part: feature:25567-25654:1:exon
so has part: feature:26003-26158:1:exon
so has part: feature:27347-27817:1:exon

position:27817:1
position: 27817
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:22427-22963:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:23041-23161:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:23247-23460:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:23980-24126:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:24259-24343:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:24794-24982:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:25567-25654:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:26003-26158:1:exon

position:26003:1
position: 26003
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:26158:1
position: 26158
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:27347-27817:1:exon

DPAGT1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 87175
gene: DPAGT1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: UDP-N-acetylglucosamine--dolichyl-phosphate N-acetylglucosaminephosphotransferase isoform X1
translation: MAAWPTVPLLINLGGSLLGFAATLTLIPAFTDHFLAARLFGEDLNKTSRRPVPEAQGVISGAVFLIILFCFIPVPFLRCFVEEQCAAFPHDEFVELIGSLLAICCMIFLGFADDVLNLRWRHKLLLPTMASLPLLMVYFTNFGNTTIVVPKPFRVLLGMHLDLGILYYVYMGMLAVFCTNAINILAGINGIEAGQSLVIAASIIIFNIVELNGDYQDDHIFSLYFMIPFFFTTLGLFYYNWYPSQVFVGDTFCYFAGMTFAVVGILGHFSKTMLLFFIPQVLNFLYSLPQLFHVIPCPRHRLPRLNPSTGKLEMSYSKFKTKRLSSLGTSILKVVKILHVVDVRSGTDEDGEYTECNNMTLINFVIKLIGPTHERNLTLLLLLIQVLGSMIAFSIRYQLVRLFYDV
SIO_010081: DPAGT1
subclass of: SO_0000673
so part of: DPAGT1
location: join(22809..22963,23041..23161,23247..23460,23980..24126,24259..24343,24794..24982,25567..25654,26003..26158,27347..27412)
location: region:22809-27412:1
so has part: feature:22809-22963:1:exon
so has part: feature:23041-23161:1:exon
so has part: feature:23247-23460:1:exon
so has part: feature:23980-24126:1:exon
so has part: feature:24259-24343:1:exon
so has part: feature:24794-24982:1:exon
so has part: feature:25567-25654:1:exon
so has part: feature:26003-26158:1:exon
so has part: feature:27347-27412:1:exon

XP_030820724.1
type: Protein
SIO_000068: ncbiprotein

position:22809:1
position: 22809
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:27412:1
position: 27412
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:22809-22963:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:23041-23161:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:23247-23460:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:23980-24126:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:24259-24343:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:24794-24982:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:25567-25654:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:26003-26158:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:27347-27412:1:exon

DPAGT1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 87175
gene: DPAGT1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: UDP-N-acetylglucosamine--dolichyl-phosphate N-acetylglucosaminephosphotransferase isoform X2
translation: MAAWPTVPLLINLGGSLLGFAATLTLIPAFTDHFLAARLFGEDLNKTSRRPVPEAQGVISGAVFLIILFCFIPVPFLRCFVEEQCAAFPHDEFVELIGSLLAICCMIFLGFADDVLNLRWRHKLLLPTMASLPLLMVYFTNFGNTTIVVPKPFRVLLGMHLDLGILYYVYMGMLAVFCTNAINILAGINGIEAGQSLVIAASIIIFNIVELNGDYQDDHIFSLYFMIPFFFTTLGLFYYNWYPSQVFVGDTFCYFAGMTFAVVGILGHFSKTMLLFFIPQVLNFLYSLPQLFHVIPCPRHRLPRLNPSTGKLEMSYSKFKTKRLSSLGTSILKVLGSMIAFSIRYQLVRLFYDV
SIO_010081: DPAGT1
subclass of: SO_0000673
so part of: DPAGT1
location: join(22809..22963,23041..23161,23247..23460,23980..24126,24259..24343,24794..24982,25567..25654,27347..27412)
location: region:22809-27412:1
so has part: feature:22809-22963:1:exon
so has part: feature:23041-23161:1:exon
so has part: feature:23247-23460:1:exon
so has part: feature:23980-24126:1:exon
so has part: feature:24259-24343:1:exon
so has part: feature:24794-24982:1:exon
so has part: feature:25567-25654:1:exon
so has part: feature:27347-27412:1:exon

XP_030820725.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:22809-22963:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:23041-23161:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:23247-23460:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:23980-24126:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:24259-24343:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:24794-24982:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:25567-25654:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:27347-27412:1:exon

LOC115913057
type: Gene
subclass of: SO_0000704
RO_0002162: 87175
gene: LOC115913057
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 29855..30835
location: region:29855-30835:1
so has part: feature:29855-30835:1:exon
subclass of: SO_0000010

115913057
type: Gene
SIO_000068: ncbigene

position:29855:1
position: 29855
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:30835:1
position: 30835
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:29855-30835:1:exon

LOC115913057
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 87175
gene: LOC115913057
product: histone H2A
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, 90 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_030964923.1
SIO_010081: LOC115913057
subclass of: SO_0000673
so part of: LOC115913057
location: 29855..30835
location: region:29855-30835:1
so has part: feature:29855-30835:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:29855-30835:1:exon

LOC115913057
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 87175
gene: LOC115913057
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: histone H2A
translation: MSGRGKSGGKARAKAKSRSSRAGLQFPVGRVHRLLRRGHYAERVGAGAPVYLAAVLEYLTAEILELAGNAARDNKKTRIIPRHLQLAVRNDEELNKLLGGVTIAQGGVLPNIQAVLLPKKTSKRGSGQQSQEY
SIO_010081: LOC115913057
subclass of: SO_0000673
so part of: LOC115913057
location: 29902..30303
location: region:29902-30303:1
so has part: feature:29902-30303:1:exon

XP_030820783.1
type: Protein
SIO_000068: ncbiprotein

position:29902:1
position: 29902
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:30303:1
position: 30303
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:29902-30303:1:exon

HMBS
type: Gene
subclass of: SO_0000704
RO_0002162: 87175
gene: HMBS
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(31094..40881)
location: region:31094-40881:-1
so has part: feature:31094-40881:-1:exon
subclass of: SO_0000010

115913056
type: Gene
SIO_000068: ncbigene

position:31094:-1
position: 31094
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:40881:-1
position: 40881
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:31094-40881:-1:exon

HMBS
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 87175
gene: HMBS
product: hydroxymethylbilane synthase
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 ESTs, 26 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
transcript id: XM_030964922.1
SIO_010081: HMBS
subclass of: SO_0000673
so part of: HMBS
location: complement(join(31094..31571,31788..31874,32450..32503,32733..32852,33710..33748,34294..34407,35101..35176,36632..36709,37014..37091,38209..38264,38358..38407,39083..39155,40708..40881))
location: region:31094-40881:-1
so has part: feature:40708-40881:-1:exon
so has part: feature:39083-39155:-1:exon
so has part: feature:38358-38407:-1:exon
so has part: feature:38209-38264:-1:exon
so has part: feature:37014-37091:-1:exon
so has part: feature:36632-36709:-1:exon
so has part: feature:35101-35176:-1:exon
so has part: feature:34294-34407:-1:exon
so has part: feature:33710-33748:-1:exon
so has part: feature:32733-32852:-1:exon
so has part: feature:32450-32503:-1:exon
so has part: feature:31788-31874:-1:exon
so has part: feature:31094-31571:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:40708-40881:-1:exon

position:40708:-1
position: 40708
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:39083-39155:-1:exon

position:39083:-1
position: 39083
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:39155:-1
position: 39155
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:38358-38407:-1:exon

position:38358:-1
position: 38358
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:38407:-1
position: 38407
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:38209-38264:-1:exon

position:38209:-1
position: 38209
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:38264:-1
position: 38264
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:37014-37091:-1:exon

position:37014:-1
position: 37014
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:37091:-1
position: 37091
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:36632-36709:-1:exon

position:36632:-1
position: 36632
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:36709:-1
position: 36709
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:35101-35176:-1:exon

position:35101:-1
position: 35101
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:35176:-1
position: 35176
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:34294-34407:-1:exon

position:34294:-1
position: 34294
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:34407:-1
position: 34407
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:33710-33748:-1:exon

position:33710:-1
position: 33710
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:33748:-1
position: 33748
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:32733-32852:-1:exon

position:32733:-1
position: 32733
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:32852:-1
position: 32852
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:32450-32503:-1:exon

position:32450:-1
position: 32450
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:32503:-1
position: 32503
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:31788-31874:-1:exon

position:31788:-1
position: 31788
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:31874:-1
position: 31874
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:31094-31571:-1:exon

position:31571:-1
position: 31571
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

HMBS
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 87175
gene: HMBS
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: porphobilinogen deaminase
translation: MAELGTAAVGLGRAESGGGADGAGVDPLLPREENGVDGRAIRVGTRRSQLARIQTNSVVTMLHELYPDLHFEIVAMSTTGDKILDTALSKIGEKSLFTKELENALERNEVDLVVHSLKDLPTSLPPGFTIGAVCKRENPLDAVVFHPKNCGKTLSLLPEKSVIGTSSLRRAAQLKKKFPHLEFRDIRGNLNTRLKKLDEKEDFSAIILAAAGLKRMGWENRIGQLLGPEDCLYAVGQGALAVEVRAKDQEILNMVSALHDADTVLCCIAERAFMKHLEGGCSVPVAVNTLLKDGQLYLTGAVYSLDGSDSLKETMQTGVSYPHQNEDGPNDDVQHVGITAKNVPVQAQKAAENLGVELASLLLSKGAKHILSVARQLNDAR
SIO_010081: HMBS
subclass of: SO_0000673
so part of: HMBS
location: complement(join(31398..31571,31788..31874,32450..32503,32733..32852,33710..33748,34294..34407,35101..35176,36632..36709,37014..37091,38209..38264,38358..38407,39083..39155,40708..40854))
location: region:31398-40854:-1
so has part: feature:40708-40854:-1:exon
so has part: feature:39083-39155:-1:exon
so has part: feature:38358-38407:-1:exon
so has part: feature:38209-38264:-1:exon
so has part: feature:37014-37091:-1:exon
so has part: feature:36632-36709:-1:exon
so has part: feature:35101-35176:-1:exon
so has part: feature:34294-34407:-1:exon
so has part: feature:33710-33748:-1:exon
so has part: feature:32733-32852:-1:exon
so has part: feature:32450-32503:-1:exon
so has part: feature:31788-31874:-1:exon
so has part: feature:31398-31571:-1:exon

XP_030820782.1
type: Protein
SIO_000068: ncbiprotein

position:31398:-1
position: 31398
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:40854:-1
position: 40854
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:40708-40854:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:39083-39155:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:38358-38407:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:38209-38264:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:37014-37091:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:36632-36709:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:35101-35176:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:34294-34407:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:33710-33748:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:32733-32852:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:32450-32503:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:31788-31874:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:31398-31571:-1:exon

VPS11
type: Gene
subclass of: SO_0000704
RO_0002162: 87175
gene: VPS11
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(40973..51204)
location: region:40973-51204:-1
so has part: feature:40973-51204:-1:exon
subclass of: SO_0000010

115913107
type: Gene
SIO_000068: ncbigene

position:40973:-1
position: 40973
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:51204:-1
position: 51204
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:40973-51204:-1:exon

VPS11
type: Miscellaneous RNA
subclass of: SO_0000673
RO_0002162: 87175
gene: VPS11
product: VPS11 core subunit of CORVET and HOPS complexes, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 12 ESTs, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XR_004061372.1
SIO_010081: VPS11
so part of: VPS11
location: complement(join(40973..41308,41994..42216,42331..42434,43082..43284,43595..43734,44208..44369,45234..45422,45904..46047,46464..46650,47609..47760,48035..48236,48631..48878,48979..49142,50193..50328,50520..50668,51008..51204))
location: region:40973-51204:-1
so has part: feature:51008-51204:-1:exon
so has part: feature:50520-50668:-1:exon
so has part: feature:50193-50328:-1:exon
so has part: feature:48979-49142:-1:exon
so has part: feature:48631-48878:-1:exon
so has part: feature:48035-48236:-1:exon
so has part: feature:47609-47760:-1:exon
so has part: feature:46464-46650:-1:exon
so has part: feature:45904-46047:-1:exon
so has part: feature:45234-45422:-1:exon
so has part: feature:44208-44369:-1:exon
so has part: feature:43595-43734:-1:exon
so has part: feature:43082-43284:-1:exon
so has part: feature:42331-42434:-1:exon
so has part: feature:41994-42216:-1:exon
so has part: feature:40973-41308:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:51008-51204:-1:exon

position:51008:-1
position: 51008
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:50520-50668:-1:exon

position:50520:-1
position: 50520
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:50668:-1
position: 50668
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:50193-50328:-1:exon

position:50193:-1
position: 50193
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:50328:-1
position: 50328
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:48979-49142:-1:exon

position:48979:-1
position: 48979
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:49142:-1
position: 49142
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:48631-48878:-1:exon

position:48631:-1
position: 48631
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:48878:-1
position: 48878
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:48035-48236:-1:exon

position:48035:-1
position: 48035
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:48236:-1
position: 48236
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:47609-47760:-1:exon

position:47609:-1
position: 47609
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:47760:-1
position: 47760
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:46464-46650:-1:exon

position:46464:-1
position: 46464
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:46650:-1
position: 46650
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:45904-46047:-1:exon

position:45904:-1
position: 45904
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:46047:-1
position: 46047
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:45234-45422:-1:exon

position:45234:-1
position: 45234
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:45422:-1
position: 45422
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:44208-44369:-1:exon

position:44208:-1
position: 44208
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:44369:-1
position: 44369
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:43595-43734:-1:exon

position:43595:-1
position: 43595
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:43734:-1
position: 43734
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:43082-43284:-1:exon

position:43082:-1
position: 43082
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:43284:-1
position: 43284
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:42331-42434:-1:exon

position:42331:-1
position: 42331
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:42434:-1
position: 42434
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:41994-42216:-1:exon

position:41994:-1
position: 41994
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:42216:-1
position: 42216
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:40973-41308:-1:exon

position:41308:-1
position: 41308
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

VPS11
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 87175
gene: VPS11
product: VPS11 core subunit of CORVET and HOPS complexes, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 26 ESTs, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_030964995.1
SIO_010081: VPS11
subclass of: SO_0000673
so part of: VPS11
location: complement(join(41034..41308,41994..42216,42331..42502,43082..43284,43595..43734,44208..44369,45234..45422,45904..46047,46464..46650,47609..47760,48035..48236,48631..48878,48979..49142,50256..50328,50520..50668,51008..51204))
location: region:41034-51204:-1
so has part: feature:51008-51204:-1:exon
so has part: feature:50520-50668:-1:exon
so has part: feature:50256-50328:-1:exon
so has part: feature:48979-49142:-1:exon
so has part: feature:48631-48878:-1:exon
so has part: feature:48035-48236:-1:exon
so has part: feature:47609-47760:-1:exon
so has part: feature:46464-46650:-1:exon
so has part: feature:45904-46047:-1:exon
so has part: feature:45234-45422:-1:exon
so has part: feature:44208-44369:-1:exon
so has part: feature:43595-43734:-1:exon
so has part: feature:43082-43284:-1:exon
so has part: feature:42331-42502:-1:exon
so has part: feature:41994-42216:-1:exon
so has part: feature:41034-41308:-1:exon

position:41034:-1
position: 41034
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:51008-51204:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:50520-50668:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:50256-50328:-1:exon

position:50256:-1
position: 50256
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:48979-49142:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:48631-48878:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:48035-48236:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:47609-47760:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:46464-46650:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:45904-46047:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:45234-45422:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:44208-44369:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:43595-43734:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:43082-43284:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:42331-42502:-1:exon

position:42502:-1
position: 42502
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:41994-42216:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:41034-41308:-1:exon

VPS11
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 87175
gene: VPS11
product: VPS11 core subunit of CORVET and HOPS complexes, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 26 ESTs, 8 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
transcript id: XM_030964994.1
SIO_010081: VPS11
subclass of: SO_0000673
so part of: VPS11
location: complement(join(41034..41308,41994..42216,42331..42502,43082..43284,43595..43734,44208..44369,45234..45422,45904..46047,46464..46650,47609..47760,48035..48236,48631..48878,48979..49142,50193..50328,50520..50668,51008..51161))
location: region:41034-51161:-1
so has part: feature:51008-51161:-1:exon
so has part: feature:50520-50668:-1:exon
so has part: feature:50193-50328:-1:exon
so has part: feature:48979-49142:-1:exon
so has part: feature:48631-48878:-1:exon
so has part: feature:48035-48236:-1:exon
so has part: feature:47609-47760:-1:exon
so has part: feature:46464-46650:-1:exon
so has part: feature:45904-46047:-1:exon
so has part: feature:45234-45422:-1:exon
so has part: feature:44208-44369:-1:exon
so has part: feature:43595-43734:-1:exon
so has part: feature:43082-43284:-1:exon
so has part: feature:42331-42502:-1:exon
so has part: feature:41994-42216:-1:exon
so has part: feature:41034-41308:-1:exon

position:51161:-1
position: 51161
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:51008-51161:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:50520-50668:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:50193-50328:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:48979-49142:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:48631-48878:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:48035-48236:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:47609-47760:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:46464-46650:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:45904-46047:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:45234-45422:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:44208-44369:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:43595-43734:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:43082-43284:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:42331-42502:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:41994-42216:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:41034-41308:-1:exon

VPS11
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 87175
gene: VPS11
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: vacuolar protein sorting-associated protein 11 homolog isoform X2
translation: MAAYLQWRRFVFFDRETVREPSGPDGAGAKPFALPPGIAVCDSGRGSLVFGDMEGQIWFLPRSLQLSSFQAYKLRVTHLYQLKQHSILVSIGEDEEGINPLVKVWNLEKRDGGNPLCTRIFPAIPGFADGSVVLTKGDITRDRHSKTQILHEGSYPVTGLAFRQSGKTTHLFVVTTENIQSYMLSVKDYPHLELDTHGCGLRCSSLSDPSQDLQFIVAGNECVYLYQPDERGPCFAFEGQKLIVHWYRGYLIIVSKDRKTSPKSEFAGNEAQNSDKQVLNIYDLCNKFIAYSSIFDDIVDVLAEWGSLYVLTRDGKIHVLQEKDTQTKLEMLFRKNLFEMAINLAKSHHLDSDGLSEIFRQYGDHLYNKGNHDGAIQQYIRTIGKLEPSYVIRKFLDAQRIHNLTAYLQMLHLQSLANADHTTLLLNCYTKLKDSSKLEEFIKTSESEVHFDVETAIKVLRQAGYYSHAVYLAEKHEHHEWYLKIQLEDIKNYQEALHYIGKLPFEQAESNMKRYGKILMHHVPNETTELLKILCTDYRPSGGNEGPGMLEGKKANSEEFIPVFANNSRELKAFLEHMTEVQADSPQGVYDTLLELQLQNWAHEQDEQIKEKLHNEALTLLKSGRFKTVFDKALVLCQMHNFKDGVLYLYEQGKLFQQIMHYHMQNEQYKKVIEVCELYGDQEACLWEQALSYFARKEENCKEYIAAVLKHIENKNLMPPLLVVQTLAHNSTATLSVIKDYLVNKLQKQSCQIEQDEQRIQKYREETTRIRLEIEELKASPKIFQKTKCSICTSALELPSVHFLCGHSFHQHCFESYSESDSECPTCMPENRKVMDMIRAQEQKRDLHDQFQHQLKCSNDGFSVVADYFGRGVFNKLTLITDLPSGKTATTIEAGLQRELLIHTKRST
SIO_010081: VPS11
subclass of: SO_0000673
so part of: VPS11
location: complement(join(41144..41308,41994..42216,42331..42502,43082..43284,43595..43734,44208..44369,45234..45422,45904..46047,46464..46650,47609..47760,48035..48236,48631..48878,48979..49142,50256..50328,50520..50668,51008..51161))
location: region:41144-51161:-1
so has part: feature:51008-51161:-1:exon
so has part: feature:50520-50668:-1:exon
so has part: feature:50256-50328:-1:exon
so has part: feature:48979-49142:-1:exon
so has part: feature:48631-48878:-1:exon
so has part: feature:48035-48236:-1:exon
so has part: feature:47609-47760:-1:exon
so has part: feature:46464-46650:-1:exon
so has part: feature:45904-46047:-1:exon
so has part: feature:45234-45422:-1:exon
so has part: feature:44208-44369:-1:exon
so has part: feature:43595-43734:-1:exon
so has part: feature:43082-43284:-1:exon
so has part: feature:42331-42502:-1:exon
so has part: feature:41994-42216:-1:exon
so has part: feature:41144-41308:-1:exon

XP_030820855.1
type: Protein
SIO_000068: ncbiprotein

position:41144:-1
position: 41144
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:51008-51161:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:50520-50668:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:50256-50328:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:48979-49142:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:48631-48878:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:48035-48236:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:47609-47760:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:46464-46650:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:45904-46047:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:45234-45422:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:44208-44369:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:43595-43734:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:43082-43284:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:42331-42502:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:41994-42216:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:41144-41308:-1:exon

VPS11
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 87175
gene: VPS11
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: vacuolar protein sorting-associated protein 11 homolog isoform X1
translation: MAAYLQWRRFVFFDRETVREPSGPDGAGAKPFALPPGIAVCDSGRGSLVFGDMEGQIWFLPRSLQLSSFQAYKLRVTHLYQLKQHSILVSIGEDEEGINPLVKVWNLEKRDGGNPLCTRIFPAIPGNKPTVVSCLTVHENLNFMAIGFADGSVVLTKGDITRDRHSKTQILHEGSYPVTGLAFRQSGKTTHLFVVTTENIQSYMLSVKDYPHLELDTHGCGLRCSSLSDPSQDLQFIVAGNECVYLYQPDERGPCFAFEGQKLIVHWYRGYLIIVSKDRKTSPKSEFAGNEAQNSDKQVLNIYDLCNKFIAYSSIFDDIVDVLAEWGSLYVLTRDGKIHVLQEKDTQTKLEMLFRKNLFEMAINLAKSHHLDSDGLSEIFRQYGDHLYNKGNHDGAIQQYIRTIGKLEPSYVIRKFLDAQRIHNLTAYLQMLHLQSLANADHTTLLLNCYTKLKDSSKLEEFIKTSESEVHFDVETAIKVLRQAGYYSHAVYLAEKHEHHEWYLKIQLEDIKNYQEALHYIGKLPFEQAESNMKRYGKILMHHVPNETTELLKILCTDYRPSGGNEGPGMLEGKKANSEEFIPVFANNSRELKAFLEHMTEVQADSPQGVYDTLLELQLQNWAHEQDEQIKEKLHNEALTLLKSGRFKTVFDKALVLCQMHNFKDGVLYLYEQGKLFQQIMHYHMQNEQYKKVIEVCELYGDQEACLWEQALSYFARKEENCKEYIAAVLKHIENKNLMPPLLVVQTLAHNSTATLSVIKDYLVNKLQKQSCQIEQDEQRIQKYREETTRIRLEIEELKASPKIFQKTKCSICTSALELPSVHFLCGHSFHQHCFESYSESDSECPTCMPENRKVMDMIRAQEQKRDLHDQFQHQLKCSNDGFSVVADYFGRGVFNKLTLITDLPSGKTATTIEAGLQRELLIHTKRST
SIO_010081: VPS11
subclass of: SO_0000673
so part of: VPS11
location: complement(join(41144..41308,41994..42216,42331..42502,43082..43284,43595..43734,44208..44369,45234..45422,45904..46047,46464..46650,47609..47760,48035..48236,48631..48878,48979..49142,50193..50328,50520..50668,51008..51161))
location: region:41144-51161:-1
so has part: feature:51008-51161:-1:exon
so has part: feature:50520-50668:-1:exon
so has part: feature:50193-50328:-1:exon
so has part: feature:48979-49142:-1:exon
so has part: feature:48631-48878:-1:exon
so has part: feature:48035-48236:-1:exon
so has part: feature:47609-47760:-1:exon
so has part: feature:46464-46650:-1:exon
so has part: feature:45904-46047:-1:exon
so has part: feature:45234-45422:-1:exon
so has part: feature:44208-44369:-1:exon
so has part: feature:43595-43734:-1:exon
so has part: feature:43082-43284:-1:exon
so has part: feature:42331-42502:-1:exon
so has part: feature:41994-42216:-1:exon
so has part: feature:41144-41308:-1:exon

XP_030820854.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:51008-51161:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:50520-50668:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:50193-50328:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:48979-49142:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:48631-48878:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:48035-48236:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:47609-47760:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:46464-46650:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:45904-46047:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:45234-45422:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:44208-44369:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:43595-43734:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:43082-43284:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:42331-42502:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:41994-42216:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:41144-41308:-1:exon

DDX6
type: Gene
subclass of: SO_0000704
RO_0002162: 87175
gene: DDX6
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(53103..70541)
location: region:53103-70541:-1
so has part: feature:53103-70541:-1:exon
subclass of: SO_0000010

115913002
type: Gene
SIO_000068: ncbigene

position:53103:-1
position: 53103
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:70541:-1
position: 70541
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:53103-70541:-1:exon

DDX6
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 87175
gene: DDX6
product: DEAD-box helicase 6, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 mRNAs, 9 ESTs, 17 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
transcript id: XM_030964840.1
SIO_010081: DDX6
subclass of: SO_0000673
so part of: DDX6
location: complement(join(53103..56950,58455..58638,59365..59466,60351..60414,61922..62038,62366..62494,62961..63083,63593..63687,63958..64104,64575..64704,65929..66033,66499..66562,68011..68474,70420..70541))
location: region:53103-70541:-1
so has part: feature:70420-70541:-1:exon
so has part: feature:68011-68474:-1:exon
so has part: feature:66499-66562:-1:exon
so has part: feature:65929-66033:-1:exon
so has part: feature:64575-64704:-1:exon
so has part: feature:63958-64104:-1:exon
so has part: feature:63593-63687:-1:exon
so has part: feature:62961-63083:-1:exon
so has part: feature:62366-62494:-1:exon
so has part: feature:61922-62038:-1:exon
so has part: feature:60351-60414:-1:exon
so has part: feature:59365-59466:-1:exon
so has part: feature:58455-58638:-1:exon
so has part: feature:53103-56950:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:70420-70541:-1:exon

position:70420:-1
position: 70420
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:68011-68474:-1:exon

position:68011:-1
position: 68011
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:68474:-1
position: 68474
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:66499-66562:-1:exon

position:66499:-1
position: 66499
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:66562:-1
position: 66562
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:65929-66033:-1:exon

position:65929:-1
position: 65929
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:66033:-1
position: 66033
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:64575-64704:-1:exon

position:64575:-1
position: 64575
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:64704:-1
position: 64704
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:63958-64104:-1:exon

position:63958:-1
position: 63958
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:64104:-1
position: 64104
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:63593-63687:-1:exon

position:63593:-1
position: 63593
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:63687:-1
position: 63687
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:62961-63083:-1:exon

position:62961:-1
position: 62961
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:63083:-1
position: 63083
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:62366-62494:-1:exon

position:62366:-1
position: 62366
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:62494:-1
position: 62494
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:61922-62038:-1:exon

position:61922:-1
position: 61922
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:62038:-1
position: 62038
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:60351-60414:-1:exon

position:60351:-1
position: 60351
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:60414:-1
position: 60414
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:59365-59466:-1:exon

position:59365:-1
position: 59365
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:59466:-1
position: 59466
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:58455-58638:-1:exon

position:58455:-1
position: 58455
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:58638:-1
position: 58638
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:53103-56950:-1:exon

position:56950:-1
position: 56950
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

DDX6
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 87175
gene: DDX6
product: DEAD-box helicase 6, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 ESTs, 17 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_030964841.1
SIO_010081: DDX6
subclass of: SO_0000673
so part of: DDX6
location: complement(join(53103..56950,58455..58638,59365..59466,60351..60414,61922..62038,62366..62494,62961..63083,63593..63687,63958..64104,64575..64704,65929..66033,66499..66562,68011..68474,69189..70270))
location: region:53103-70270:-1
so has part: feature:69189-70270:-1:exon
so has part: feature:68011-68474:-1:exon
so has part: feature:66499-66562:-1:exon
so has part: feature:65929-66033:-1:exon
so has part: feature:64575-64704:-1:exon
so has part: feature:63958-64104:-1:exon
so has part: feature:63593-63687:-1:exon
so has part: feature:62961-63083:-1:exon
so has part: feature:62366-62494:-1:exon
so has part: feature:61922-62038:-1:exon
so has part: feature:60351-60414:-1:exon
so has part: feature:59365-59466:-1:exon
so has part: feature:58455-58638:-1:exon
so has part: feature:53103-56950:-1:exon

position:70270:-1
position: 70270
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:69189-70270:-1:exon

position:69189:-1
position: 69189
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:68011-68474:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:66499-66562:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:65929-66033:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:64575-64704:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:63958-64104:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:63593-63687:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:62961-63083:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:62366-62494:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:61922-62038:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:60351-60414:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:59365-59466:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:58455-58638:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:53103-56950:-1:exon

DDX6
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 87175
gene: DDX6
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: probable ATP-dependent RNA helicase DDX6
translation: MSTARTENPVIMGLSSQNGQLRGPVKPSGGPGGGGTQTQQQMNQLKNANTINNGTQQQAQSMTTAIKPGDDWKKTLKLPPKDLRIKTSDVTSTKGNEFEDYCLKRELLMGIFEMGWEKPSPIQEESIPIALSGRDILARAKNGTGKSGAYLIPLLERLDLKKDNIQAMVIVPTRELALQVSQICIQVSKHMGGAKVMATTGGTNLRDDIMRLDDTVHVVIATPGRILDLIKKGVAKVEHVQMIVLDEADKLLSQDFVQIMEDIILTLPKNRQILLYSATFPLSVQKFMNSHLQKPYEINLMEELTLKGVTQYYAYVTERQKVHCLNTLFSRLQINQSIIFCNSSQRVELLAKKISQLGYSCFYIHAKMRQEHRNRVFHDFRNGLCRNLVCTDLFTRGIDIQAVNVVINFDFPKLAETYLHRIGRSGRFGHLGLAINLITYDDRFNLKSIEEQLGTEIKPIPSNIDKSLYVAEYHSEPVEDEKQ
SIO_010081: DDX6
subclass of: SO_0000673
so part of: DDX6
location: complement(join(58463..58638,59365..59466,60351..60414,61922..62038,62366..62494,62961..63083,63593..63687,63958..64104,64575..64704,65929..66033,66499..66562,68011..68210))
location: region:58463-68210:-1
so has part: feature:68011-68210:-1:exon
so has part: feature:66499-66562:-1:exon
so has part: feature:65929-66033:-1:exon
so has part: feature:64575-64704:-1:exon
so has part: feature:63958-64104:-1:exon
so has part: feature:63593-63687:-1:exon
so has part: feature:62961-63083:-1:exon
so has part: feature:62366-62494:-1:exon
so has part: feature:61922-62038:-1:exon
so has part: feature:60351-60414:-1:exon
so has part: feature:59365-59466:-1:exon
so has part: feature:58463-58638:-1:exon

XP_030820700.1
type: Protein
SIO_000068: ncbiprotein

position:58463:-1
position: 58463
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:68210:-1
position: 68210
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:68011-68210:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:66499-66562:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:65929-66033:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:64575-64704:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:63958-64104:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:63593-63687:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:62961-63083:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:62366-62494:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:61922-62038:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:60351-60414:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:59365-59466:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:58463-58638:-1:exon

DDX6
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 87175
gene: DDX6
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: probable ATP-dependent RNA helicase DDX6
translation: MSTARTENPVIMGLSSQNGQLRGPVKPSGGPGGGGTQTQQQMNQLKNANTINNGTQQQAQSMTTAIKPGDDWKKTLKLPPKDLRIKTSDVTSTKGNEFEDYCLKRELLMGIFEMGWEKPSPIQEESIPIALSGRDILARAKNGTGKSGAYLIPLLERLDLKKDNIQAMVIVPTRELALQVSQICIQVSKHMGGAKVMATTGGTNLRDDIMRLDDTVHVVIATPGRILDLIKKGVAKVEHVQMIVLDEADKLLSQDFVQIMEDIILTLPKNRQILLYSATFPLSVQKFMNSHLQKPYEINLMEELTLKGVTQYYAYVTERQKVHCLNTLFSRLQINQSIIFCNSSQRVELLAKKISQLGYSCFYIHAKMRQEHRNRVFHDFRNGLCRNLVCTDLFTRGIDIQAVNVVINFDFPKLAETYLHRIGRSGRFGHLGLAINLITYDDRFNLKSIEEQLGTEIKPIPSNIDKSLYVAEYHSEPVEDEKQ
SIO_010081: DDX6
subclass of: SO_0000673
so part of: DDX6
location: complement(join(58463..58638,59365..59466,60351..60414,61922..62038,62366..62494,62961..63083,63593..63687,63958..64104,64575..64704,65929..66033,66499..66562,68011..68210))
location: region:58463-68210:-1
so has part: feature:68011-68210:-1:exon
so has part: feature:66499-66562:-1:exon
so has part: feature:65929-66033:-1:exon
so has part: feature:64575-64704:-1:exon
so has part: feature:63958-64104:-1:exon
so has part: feature:63593-63687:-1:exon
so has part: feature:62961-63083:-1:exon
so has part: feature:62366-62494:-1:exon
so has part: feature:61922-62038:-1:exon
so has part: feature:60351-60414:-1:exon
so has part: feature:59365-59466:-1:exon
so has part: feature:58463-58638:-1:exon

XP_030820701.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:68011-68210:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:66499-66562:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:65929-66033:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:64575-64704:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:63958-64104:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:63593-63687:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:62961-63083:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:62366-62494:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:61922-62038:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:60351-60414:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:59365-59466:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:58463-58638:-1:exon

CXCR5
type: Gene
subclass of: SO_0000704
RO_0002162: 87175
gene: CXCR5
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 71861..77461
location: region:71861-77461:1
so has part: feature:71861-77461:1:exon
subclass of: SO_0000010

115913064
type: Gene
SIO_000068: ncbigene

position:71861:1
position: 71861
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:77461:1
position: 77461
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:71861-77461:1:exon

CXCR5
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 87175
gene: CXCR5
product: C-X-C motif chemokine receptor 5
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 mRNAs, 3 ESTs, 13 Proteins, and 98% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_030964932.1
SIO_010081: CXCR5
subclass of: SO_0000673
so part of: CXCR5
location: join(71861..72369,76031..77461)
location: region:71861-77461:1
so has part: feature:71861-72369:1:exon
so has part: feature:76031-77461:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:71861-72369:1:exon

position:72369:1
position: 72369
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:76031-77461:1:exon

position:76031:1
position: 76031
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

CXCR5
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 87175
gene: CXCR5
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: C-X-C chemokine receptor type 5
translation: MINSTPEKNFVAISGGETDRAPQTMGPVSYSSETYDLSQVELSGYYEAENTTPSLEGYFCFNPASPVVGNQGDPFRKVFMPLIYLLMFVLGTLGNALVLVILERFKRSRTTTENFLFHLTLANLALLLTFPFSVVESLAGWVFGRFLCKILSAVHKINFYCSSMLLGCIAVDRYLAIVYAIHTYRKRRARSIHLTCTAVWLCSLLLTLPDLIFMEVWTDDSNRSICYFPEVGIDGNNAWLATRFLYHTVGFFVPLLVMCYCYMAIIRALCQSQRLQRQKAVRVAILVTGIFLLCWSPYHIVIFLNTLTKLEAFTKNCLLEDQLDTAIMVTEAIGFTHCCLNPILYAFIGVKFRNDFFRILQELGCISQETLQEILEVTRKGSGIESDNTTSISTF
SIO_010081: CXCR5
subclass of: SO_0000673
so part of: CXCR5
location: join(72259..72369,76031..77107)
location: region:72259-77107:1
so has part: feature:72259-72369:1:exon
so has part: feature:76031-77107:1:exon

XP_030820792.1
type: Protein
SIO_000068: ncbiprotein

position:72259:1
position: 72259
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:77107:1
position: 77107
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:72259-72369:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:76031-77107:1:exon

BCL9L
type: Gene
subclass of: SO_0000704
RO_0002162: 87175
gene: BCL9L
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(80391..128093)
location: region:80391-128093:-1
so has part: feature:80391-128093:-1:exon
subclass of: SO_0000010

115912994
type: Gene
SIO_000068: ncbigene

position:80391:-1
position: 80391
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:128093:-1
position: 128093
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:80391-128093:-1:exon

BCL9L
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 87175
gene: BCL9L
product: BCL9 like, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 12 ESTs, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
transcript id: XM_030964818.1
SIO_010081: BCL9L
subclass of: SO_0000673
so part of: BCL9L
location: complement(join(80391..85008,86274..86525,86960..89351,89776..89860,90661..90871,92051..92173,93841..94204,128031..128093))
location: region:80391-128093:-1
so has part: feature:128031-128093:-1:exon
so has part: feature:93841-94204:-1:exon
so has part: feature:92051-92173:-1:exon
so has part: feature:90661-90871:-1:exon
so has part: feature:89776-89860:-1:exon
so has part: feature:86960-89351:-1:exon
so has part: feature:86274-86525:-1:exon
so has part: feature:80391-85008:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:128031-128093:-1:exon

position:128031:-1
position: 128031
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:93841-94204:-1:exon

position:93841:-1
position: 93841
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:94204:-1
position: 94204
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:92051-92173:-1:exon

position:92051:-1
position: 92051
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:92173:-1
position: 92173
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:90661-90871:-1:exon

position:90661:-1
position: 90661
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:90871:-1
position: 90871
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:89776-89860:-1:exon

position:89776:-1
position: 89776
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:89860:-1
position: 89860
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:86960-89351:-1:exon

position:86960:-1
position: 86960
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:89351:-1
position: 89351
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:86274-86525:-1:exon

position:86274:-1
position: 86274
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:86525:-1
position: 86525
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:80391-85008:-1:exon

position:85008:-1
position: 85008
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

BCL9L
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 87175
gene: BCL9L
product: BCL9 like, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 15 ESTs, 8 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
transcript id: XM_030964817.1
SIO_010081: BCL9L
subclass of: SO_0000673
so part of: BCL9L
location: complement(join(80391..85008,86265..86525,86960..89351,89776..89860,90661..90871,92051..92173,93841..94204,128031..128093))
location: region:80391-128093:-1
so has part: feature:128031-128093:-1:exon
so has part: feature:93841-94204:-1:exon
so has part: feature:92051-92173:-1:exon
so has part: feature:90661-90871:-1:exon
so has part: feature:89776-89860:-1:exon
so has part: feature:86960-89351:-1:exon
so has part: feature:86265-86525:-1:exon
so has part: feature:80391-85008:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:128031-128093:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:93841-94204:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:92051-92173:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:90661-90871:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:89776-89860:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:86960-89351:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:86265-86525:-1:exon

position:86265:-1
position: 86265
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:80391-85008:-1:exon

BCL9L
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 87175
gene: BCL9L
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: B-cell CLL/lymphoma 9-like protein isoform X2
translation: MHPDNKLPSHGKAGSSNALAQHHNVSQAPTCNLGSKGVGAGSHGSKATQISPGNSGLKNSQNTVPNFSSLKGKVKRERSISVDSGEQREASTPSQDTESKGEVAPRSKRRCVLERKQPYSGDEWCSGPDSEEDDKPISSAHSCNVADPAMSTAPQLGPGSNPLPNLSESSASGVPHGAAPGLRSEAAGGGGGGTGKQPSQFVYVFTTHLANTAAEAVLQGRADSILAYHQQNVPRAKLDQAPPAPKVLGVAEPLPINPPAANTPQSQPLVPQASQPQPQPPPPQPPAPPPQAISQTPLPAPSSLPQEGTSEDGRRDLTPNSLGNNSSNNQPGSNHPNTPTASASTMQPGQVDSSATPSSSLLGEGPGMPGNGQAGLGPRNTMNSEGLSKEQLEHRERSLQTLRDIERLLLRSGEAEPFLKSSQNAGEGGTAPQPQAAPAQPPAPPASIKKYEEPLQSMISQTQSLGGPSLEHEVPHHPGPDMGQQMNMMMQRLNQDSLTPEQVAWRKLQEEYYEEKRRKEEQISIHGRPMQEIMIPQSMGSMMMRGPPPPYHSKPGEQWPPGMGSQLRAPIDVQDPLQLRGGPPFPGPRFPGNQMQRVSGFGGMQNMPLDALGPMNTMQRPVRPSVGWSDDMSPMGGPGNFPQGTLPYPPGQGDPERFMNPRAREEILRHQLMEKRPVAMQRPMGISNNSMSQGMEMERMMQAHRQMDPSMFAGQITGETLSSAPMGMDFAGTRGMLSPPMSQSGLRDMDTPMGPGNLNMNMNVNMNMNMNLNVQMTPQQQMMMSQKMRGPEMMTHQGMNPEELARVRAQNGNGSAILTGPQKMMIPSQFPNQGQQGFSTGQGSYPNLPQEMGSGSDMFSPEQGTMPVGSISGTTRLSHIPLPPVSNPTPTPGGNLANMHPAPSRGLGRRPSDLTININQMNSPSMGHLKSPTLSQVHSPLVTSPSASLKSPQTPSQMISMPPSNQSGPLKSPQVMSSSLNVRSPTGSPSRLKSPSMAVSSPGWVPSPKATMPSPGVNQSKQTLNMNSSASIGALEQGSLPSGPRSSSSAPASNTSSTMNPNMPFTSSPDPSPSQNPLSLMMSQMSKYAMPSSTPLYHNAIKTIATSDDELLPDRPMLPPGSVTGNQPNQLHLNSVGPGSAQSPMGMNLPGQQPLSHEPPPTSMMSSPNPLGSNIPMHPSGPGAGVPPQNPMMLPPGPQDSLNQQCGPVPNSSQMIPSNQLVFPRMQQPHNAMPSPAGGMPMAPSAGGGPGMQQHYPPGMPLPPEDLPSQQPGQMPPQQHMMGKNIPPRIGDPYPPVLPGVASVLNDPELSEVIRPTPTGIPEFDLSRIIPSEKPSSTLQYFPKSDSQAPKSQPSNLHLMNLQNMMAEQPPVRPGMNASSLPGQQGVQRGLSMPMCHPGQVPMLGRTGIPPQQGMMGNSMHQGMMSPQQSLMAQQNFMLMQAKQRSMSVSGEMYAQTGHMMSPQGSLMGPPPQQNLMVTHQMRQRSVSLDSQMSYIPGPGNMANLPF
SIO_010081: BCL9L
subclass of: SO_0000673
so part of: BCL9L
location: complement(join(83849..85008,86274..86525,86960..89351,89776..89860,90661..90871,92051..92173,93841..94141))
location: region:83849-94141:-1
so has part: feature:93841-94141:-1:exon
so has part: feature:92051-92173:-1:exon
so has part: feature:90661-90871:-1:exon
so has part: feature:89776-89860:-1:exon
so has part: feature:86960-89351:-1:exon
so has part: feature:86274-86525:-1:exon
so has part: feature:83849-85008:-1:exon

XP_030820678.1
type: Protein
SIO_000068: ncbiprotein

position:83849:-1
position: 83849
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:94141:-1
position: 94141
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:93841-94141:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:92051-92173:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:90661-90871:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:89776-89860:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:86960-89351:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:86274-86525:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:83849-85008:-1:exon

BCL9L
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 87175
gene: BCL9L
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: B-cell CLL/lymphoma 9-like protein isoform X1
translation: MHPDNKLPSHGKAGSSNALAQHHNVSQAPTCNLGSKGVGAGSHGSKATQISPGNSGLKNSQNTVPNFSSLKGKVKRERSISVDSGEQREASTPSQDTESKGEVAPRSKRRCVLERKQPYSGDEWCSGPDSEEDDKPISSAHSCNVADPAMSTAPQLGPGSNPLPNLSESSASGVPHGAAPGLRSEAAGGGGGGTGKQPSQFVYVFTTHLANTAAEAVLQGRADSILAYHQQNVPRAKLDQAPPAPKVLGVAEPLPINPPAANTPQSQPLVPQASQPQPQPPPPQPPAPPPQAISQTPLPAPSSLPQEGTSEDGRRDLTPNSLGNNSSNNQPGSNHPNTPTASASTMQPGQVDSSATPSSSLLGEGPGMPGNGQAGLGPRNTMNSEGLSKEQLEHRERSLQTLRDIERLLLRSGEAEPFLKSSQNAGEGGTAPQPQAAPAQPPAPPASIKKYEEPLQSMISQTQSLGGPSLEHEVPHHPGPDMGQQMNMMMQRLNQDSLTPEQVAWRKLQEEYYEEKRRKEEQISIHGRPMQEIMIPQSMGSMMMRGPPPPYHSKPGEQWPPGMGSQLRAPIDVQDPLQLRGGPPFPGPRFPGNQMQRVSGFGGMQNMPLDALGPMNTMQRPVRPSVGWSDDMSPMGGPGNFPQGTLPYPPGQGDPERFMNPRAREEILRHQLMEKRPVAMQRPMGISNNSMSQGMEMERMMQAHRQMDPSMFAGQITGETLSSAPMGMDFAGTRGMLSPPMSQSGLRDMDTPMGPGNLNMNMNVNMNMNMNLNVQMTPQQQMMMSQKMRGPEMMTHQGMNPEELARVRAQNGNGSAILTGPQKMMIPSQFPNQGQQGFSTGQGSYPNLPQEMGSGSDMFSPEQGTMPVGSISGTTRLSHIPLPPVSNPTPTPGGNLANMHPAPSRGLGRRPSDLTININQMNSPSMGHLKSPTLSQVHSPLVTSPSASLKSPQTPSQMISMPPSNQSGPLKSPQVMSSSLNVRSPTGSPSRLKSPSMAVSSPGWVPSPKATMPSPGVNQSKQTLNMNSSASIGALEQGSLPSGPRSSSSAPASNTSSTMNPNMPFTSSPDPSPSQNPLSLMMSQMSKYAMPSSTPLYHNAIKTIATSDDELLPDRPMLPPGSMSGVTGNQPNQLHLNSVGPGSAQSPMGMNLPGQQPLSHEPPPTSMMSSPNPLGSNIPMHPSGPGAGVPPQNPMMLPPGPQDSLNQQCGPVPNSSQMIPSNQLVFPRMQQPHNAMPSPAGGMPMAPSAGGGPGMQQHYPPGMPLPPEDLPSQQPGQMPPQQHMMGKNIPPRIGDPYPPVLPGVASVLNDPELSEVIRPTPTGIPEFDLSRIIPSEKPSSTLQYFPKSDSQAPKSQPSNLHLMNLQNMMAEQPPVRPGMNASSLPGQQGVQRGLSMPMCHPGQVPMLGRTGIPPQQGMMGNSMHQGMMSPQQSLMAQQNFMLMQAKQRSMSVSGEMYAQTGHMMSPQGSLMGPPPQQNLMVTHQMRQRSVSLDSQMSYIPGPGNMANLPF
SIO_010081: BCL9L
subclass of: SO_0000673
so part of: BCL9L
location: complement(join(83849..85008,86265..86525,86960..89351,89776..89860,90661..90871,92051..92173,93841..94141))
location: region:83849-94141:-1
so has part: feature:93841-94141:-1:exon
so has part: feature:92051-92173:-1:exon
so has part: feature:90661-90871:-1:exon
so has part: feature:89776-89860:-1:exon
so has part: feature:86960-89351:-1:exon
so has part: feature:86265-86525:-1:exon
so has part: feature:83849-85008:-1:exon

XP_030820677.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:93841-94141:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:92051-92173:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:90661-90871:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:89776-89860:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:86960-89351:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:86265-86525:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:83849-85008:-1:exon

CCDC84
type: Gene
subclass of: SO_0000704
RO_0002162: 87175
gene: CCDC84
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 146594..149701
location: region:146594-149701:1
so has part: feature:146594-149701:1:exon
subclass of: SO_0000010

115913130
type: Gene
SIO_000068: ncbigene

position:146594:1
position: 146594
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:149701:1
position: 149701
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:146594-149701:1:exon

CCDC84
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 87175
gene: CCDC84
product: coiled-coil domain containing 84
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, 8 Proteins, and 89% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_030965025.1
SIO_010081: CCDC84
subclass of: SO_0000673
so part of: CCDC84
location: join(146594..146889,146984..147149,147220..147282,147434..147498,147633..147738,148085..148115,148485..148565,148783..148915,149382..149701)
location: region:146594-149701:1
so has part: feature:146594-146889:1:exon
so has part: feature:146984-147149:1:exon
so has part: feature:147220-147282:1:exon
so has part: feature:147434-147498:1:exon
so has part: feature:147633-147738:1:exon
so has part: feature:148085-148115:1:exon
so has part: feature:148485-148565:1:exon
so has part: feature:148783-148915:1:exon
so has part: feature:149382-149701:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:146594-146889:1:exon

position:146889:1
position: 146889
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:146984-147149:1:exon

position:146984:1
position: 146984
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:147149:1
position: 147149
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:147220-147282:1:exon

position:147220:1
position: 147220
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:147282:1
position: 147282
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:147434-147498:1:exon

position:147434:1
position: 147434
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:147498:1
position: 147498
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:147633-147738:1:exon

position:147633:1
position: 147633
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:147738:1
position: 147738
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:148085-148115:1:exon

position:148085:1
position: 148085
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:148115:1
position: 148115
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:148485-148565:1:exon

position:148485:1
position: 148485
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:148565:1
position: 148565
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:148783-148915:1:exon

position:148783:1
position: 148783
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:148915:1
position: 148915
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:149382-149701:1:exon

position:149382:1
position: 149382
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

CCDC84
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 87175
gene: CCDC84
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: coiled-coil domain-containing protein 84
translation: MAVHYCGLCRRSAFTGRRHRYSAGHRRRLREALAQLQEATAAARAAAAEADGAGAVRRYDPAEHDGRVWCPCCGRGVRRHGRRGGLALLHAGLLRHLAGPEHRRETARFWRENRAEAALRERCLVPAEEYERFAQALEQALAEHQRREEERILQMAADIREAERRQRETVRAALQLQPEPELSAGPSVCRLPAGPERDSSCGAEQPGPSGMKTGPDLAWMESSKVLTFIGHQETEGKGNVHTGAKPPWLTEEEDGSKQIGPSYEEFLKHKEKQKLKKLPVERVGANFDHTSQTSDSWLPSFGRVWNHGRRWQSRHQFRTESGEKKEKR
SIO_010081: CCDC84
subclass of: SO_0000673
so part of: CCDC84
location: join(146594..146889,146984..147149,147220..147282,147434..147498,147633..147738,148085..148115,148485..148565,148783..148915,149382..149427)
location: region:146594-149427:1
so has part: feature:146594-146889:1:exon
so has part: feature:146984-147149:1:exon
so has part: feature:147220-147282:1:exon
so has part: feature:147434-147498:1:exon
so has part: feature:147633-147738:1:exon
so has part: feature:148085-148115:1:exon
so has part: feature:148485-148565:1:exon
so has part: feature:148783-148915:1:exon
so has part: feature:149382-149427:1:exon

XP_030820885.1
type: Protein
SIO_000068: ncbiprotein

position:149427:1
position: 149427
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:146594-146889:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:146984-147149:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:147220-147282:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:147434-147498:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:147633-147738:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:148085-148115:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:148485-148565:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:148783-148915:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:149382-149427:1:exon

RPS25
type: Gene
subclass of: SO_0000704
RO_0002162: 87175
gene: RPS25
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(149996..151840)
location: region:149996-151840:-1
so has part: feature:149996-151840:-1:exon
subclass of: SO_0000010

115913131
type: Gene
SIO_000068: ncbigene

position:149996:-1
position: 149996
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:151840:-1
position: 151840
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:149996-151840:-1:exon

RPS25
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 87175
gene: RPS25
product: ribosomal protein S25
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 9 mRNAs, 40 ESTs, 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
transcript id: XM_030965026.1
SIO_010081: RPS25
subclass of: SO_0000673
so part of: RPS25
location: complement(join(149996..150078,150443..150541,150928..151111,151496..151591,151750..151840))
location: region:149996-151840:-1
so has part: feature:151750-151840:-1:exon
so has part: feature:151496-151591:-1:exon
so has part: feature:150928-151111:-1:exon
so has part: feature:150443-150541:-1:exon
so has part: feature:149996-150078:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:151750-151840:-1:exon

position:151750:-1
position: 151750
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:151496-151591:-1:exon

position:151496:-1
position: 151496
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:151591:-1
position: 151591
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:150928-151111:-1:exon

position:150928:-1
position: 150928
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:151111:-1
position: 151111
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:150443-150541:-1:exon

position:150443:-1
position: 150443
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:150541:-1
position: 150541
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:149996-150078:-1:exon

position:150078:-1
position: 150078
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

RPS25
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 87175
gene: RPS25
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: 40S ribosomal protein S25
translation: MPPKDDKKKKDAGKSAKKDKDPVNKSGGKAKKKKWSKGKVRDKLNNLVLFDKATYDKLCKEVPNYKLITPAVVSERLKIRGSLARAALQELLSKGLIKLVSKHRAQVIYTRNTKGGDAPAAGEDA
SIO_010081: RPS25
subclass of: SO_0000673
so part of: RPS25
location: complement(join(150447..150541,150928..151111,151496..151591,151750..151752))
location: region:150447-151752:-1
so has part: feature:151750-151752:-1:exon
so has part: feature:151496-151591:-1:exon
so has part: feature:150928-151111:-1:exon
so has part: feature:150447-150541:-1:exon

XP_030820886.1
type: Protein
SIO_000068: ncbiprotein

position:150447:-1
position: 150447
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:151752:-1
position: 151752
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:151750-151752:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:151496-151591:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:150928-151111:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:150447-150541:-1:exon

TRAPPC4
type: Gene
subclass of: SO_0000704
RO_0002162: 87175
gene: TRAPPC4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 151916..153690
location: region:151916-153690:1
so has part: feature:151916-153690:1:exon
subclass of: SO_0000010

115913097
type: Gene
SIO_000068: ncbigene

position:151916:1
position: 151916
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:153690:1
position: 153690
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:151916-153690:1:exon

TRAPPC4
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 87175
gene: TRAPPC4
product: trafficking protein particle complex 4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 mRNAs, 4 ESTs, 6 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
transcript id: XM_030964974.1
SIO_010081: TRAPPC4
subclass of: SO_0000673
so part of: TRAPPC4
location: join(151916..152108,152225..152399,152473..152576,152669..152795,153213..153690)
location: region:151916-153690:1
so has part: feature:151916-152108:1:exon
so has part: feature:152225-152399:1:exon
so has part: feature:152473-152576:1:exon
so has part: feature:152669-152795:1:exon
so has part: feature:153213-153690:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:151916-152108:1:exon

position:152108:1
position: 152108
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:152225-152399:1:exon

position:152225:1
position: 152225
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:152399:1
position: 152399
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:152473-152576:1:exon

position:152473:1
position: 152473
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:152576:1
position: 152576
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:152669-152795:1:exon

position:152669:1
position: 152669
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:152795:1
position: 152795
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:153213-153690:1:exon

position:153213:1
position: 153213
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

TRAPPC4
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 87175
gene: TRAPPC4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: trafficking protein particle complex subunit 4
translation: MAIFSVYVVNKAGGLIYQLDHYAPRSDTEKTFSFPLDLVLRPHDERVVVAFGQRDGIRVGHAVLAINGAEVNGRFTSDGKDVLEFLSNPANYPVSIRFGRHRLSSNEKLMLASMFHSLFAIGSQLSPEVGSSGIEMLETDTFKLHCFQTLTGIKFMVLADPRQTGIDALLRKIYEIYSDFALKNPFYSLEMPIRCELFDQNLKLALEVAEKAGPFGPGS
SIO_010081: TRAPPC4
subclass of: SO_0000673
so part of: TRAPPC4
location: join(151934..152108,152225..152399,152473..152576,152669..152795,153213..153291)
location: region:151934-153291:1
so has part: feature:151934-152108:1:exon
so has part: feature:152225-152399:1:exon
so has part: feature:152473-152576:1:exon
so has part: feature:152669-152795:1:exon
so has part: feature:153213-153291:1:exon

XP_030820834.1
type: Protein
SIO_000068: ncbiprotein

position:151934:1
position: 151934
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:153291:1
position: 153291
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:151934-152108:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:152225-152399:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:152473-152576:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:152669-152795:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:153213-153291:1:exon

SLC37A4
type: Gene
subclass of: SO_0000704
RO_0002162: 87175
gene: SLC37A4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(153790..161605)
location: region:153790-161605:-1
so has part: feature:153790-161605:-1:exon
subclass of: SO_0000010

115913096
type: Gene
SIO_000068: ncbigene

position:153790:-1
position: 153790
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:161605:-1
position: 161605
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:153790-161605:-1:exon

SLC37A4
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 87175
gene: SLC37A4
product: solute carrier family 37 member 4, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 12 ESTs, 16 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XM_030964973.1
SIO_010081: SLC37A4
subclass of: SO_0000673
so part of: SLC37A4
location: complement(join(153790..155217,155506..155644,157004..157117,157694..157779,158098..158256,159505..159748,161055..161287,161375..161605))
location: region:153790-161605:-1
so has part: feature:161375-161605:-1:exon
so has part: feature:161055-161287:-1:exon
so has part: feature:159505-159748:-1:exon
so has part: feature:158098-158256:-1:exon
so has part: feature:157694-157779:-1:exon
so has part: feature:157004-157117:-1:exon
so has part: feature:155506-155644:-1:exon
so has part: feature:153790-155217:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:161375-161605:-1:exon

position:161375:-1
position: 161375
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:161055-161287:-1:exon

position:161055:-1
position: 161055
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:161287:-1
position: 161287
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:159505-159748:-1:exon

position:159505:-1
position: 159505
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:159748:-1
position: 159748
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:158098-158256:-1:exon

position:158098:-1
position: 158098
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:158256:-1
position: 158256
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:157694-157779:-1:exon

position:157694:-1
position: 157694
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:157779:-1
position: 157779
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:157004-157117:-1:exon

position:157004:-1
position: 157004
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:157117:-1
position: 157117
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:155506-155644:-1:exon

position:155506:-1
position: 155506
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:155644:-1
position: 155644
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:153790-155217:-1:exon

position:155217:-1
position: 155217
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

SLC37A4
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 87175
gene: SLC37A4
product: solute carrier family 37 member 4, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 11 ESTs, 8 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_030964972.1
SIO_010081: SLC37A4
subclass of: SO_0000673
so part of: SLC37A4
location: complement(join(153790..155217,155506..155644,156669..156734,157004..157117,157694..157779,158098..158256,159505..159748,161055..161287,161375..161605))
location: region:153790-161605:-1
so has part: feature:161375-161605:-1:exon
so has part: feature:161055-161287:-1:exon
so has part: feature:159505-159748:-1:exon
so has part: feature:158098-158256:-1:exon
so has part: feature:157694-157779:-1:exon
so has part: feature:157004-157117:-1:exon
so has part: feature:156669-156734:-1:exon
so has part: feature:155506-155644:-1:exon
so has part: feature:153790-155217:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:161375-161605:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:161055-161287:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:159505-159748:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:158098-158256:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:157694-157779:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:157004-157117:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:156669-156734:-1:exon

position:156669:-1
position: 156669
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:156734:-1
position: 156734
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:155506-155644:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:153790-155217:-1:exon

SLC37A4
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 87175
gene: SLC37A4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: glucose-6-phosphate exchanger SLC37A4 isoform X2
translation: MAAGGYGRYRAAIFAAMFVGYTLYYFNRKTFSFVMPAVMTEVPLGKDDLGLITSSQSAAYAISKFISGVLSDQMSARWLFSSGLLMVGLVNVVFSWSSTVMAFAGLWFLNGLAQGLGWPPCGKILRKWFEPSQFGTWWAILSTSMNLAGGLGPIVAALVSMNYDWRKTLSFSGFTCMVVSFVCLVLIKNEPADVGLPNIEQGAKKGKKGSSSDSSTLTELLLSPYLWVLSTGYLVVFGVKTCCTDWGQLFLIQERGQSMLVGSSYMSALEIGGLVGSIAAGYLSDKAVAKVGLSSYGNPRHGLLLSMMAGMCVSMFLFRITVTGDSPKLWILTLGAVFGFSSYGPIALFGVIANESAPANLCGTSHAIVALMANVGGFLAGLPFSTIAKHYSWATAFWVAEVTCMASTVAFFLLRNIRTKMGRVSRKAD
SIO_010081: SLC37A4
subclass of: SO_0000673
so part of: SLC37A4
location: complement(join(155051..155217,155506..155644,157004..157117,157694..157779,158098..158256,159505..159748,161055..161287,161375..161522))
location: region:155051-161522:-1
so has part: feature:161375-161522:-1:exon
so has part: feature:161055-161287:-1:exon
so has part: feature:159505-159748:-1:exon
so has part: feature:158098-158256:-1:exon
so has part: feature:157694-157779:-1:exon
so has part: feature:157004-157117:-1:exon
so has part: feature:155506-155644:-1:exon
so has part: feature:155051-155217:-1:exon

XP_030820833.1
type: Protein
SIO_000068: ncbiprotein

position:155051:-1
position: 155051
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:161522:-1
position: 161522
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:161375-161522:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:161055-161287:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:159505-159748:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:158098-158256:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:157694-157779:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:157004-157117:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:155506-155644:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:155051-155217:-1:exon

SLC37A4
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 87175
gene: SLC37A4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: glucose-6-phosphate exchanger SLC37A4 isoform X1
translation: MAAGGYGRYRAAIFAAMFVGYTLYYFNRKTFSFVMPAVMTEVPLGKDDLGLITSSQSAAYAISKFISGVLSDQMSARWLFSSGLLMVGLVNVVFSWSSTVMAFAGLWFLNGLAQGLGWPPCGKILRKWFEPSQFGTWWAILSTSMNLAGGLGPIVAALVSMNYDWRKTLSFSGFTCMVVSFVCLVLIKNEPADVGLPNIEQGAKKGKKGSSSDSSTLTELLLSPYLWVLSTGYLVVFGVKTCCTDWGQLFLIQERGQSMLVGSSYMSALEIGGLVGSIAAGYLSDKAVAKVGLSSYGNPRHGLLLSMMAGMCVSMFLFRITVTGDSPKENHFWTVALQPLADLTGLKEHELWILTLGAVFGFSSYGPIALFGVIANESAPANLCGTSHAIVALMANVGGFLAGLPFSTIAKHYSWATAFWVAEVTCMASTVAFFLLRNIRTKMGRVSRKAD
SIO_010081: SLC37A4
subclass of: SO_0000673
so part of: SLC37A4
location: complement(join(155051..155217,155506..155644,156669..156734,157004..157117,157694..157779,158098..158256,159505..159748,161055..161287,161375..161522))
location: region:155051-161522:-1
so has part: feature:161375-161522:-1:exon
so has part: feature:161055-161287:-1:exon
so has part: feature:159505-159748:-1:exon
so has part: feature:158098-158256:-1:exon
so has part: feature:157694-157779:-1:exon
so has part: feature:157004-157117:-1:exon
so has part: feature:156669-156734:-1:exon
so has part: feature:155506-155644:-1:exon
so has part: feature:155051-155217:-1:exon

XP_030820832.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:161375-161522:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:161055-161287:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:159505-159748:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:158098-158256:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:157694-157779:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:157004-157117:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:156669-156734:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:155506-155644:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:155051-155217:-1:exon

HYOU1
type: Gene
subclass of: SO_0000704
RO_0002162: 87175
gene: HYOU1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(161688..174938)
location: region:161688-174938:-1
so has part: feature:161688-174938:-1:exon
subclass of: SO_0000010

115912998
type: Gene
SIO_000068: ncbigene

position:161688:-1
position: 161688
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:174938:-1
position: 174938
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:161688-174938:-1:exon

HYOU1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 87175
gene: HYOU1
product: hypoxia up-regulated 1
exception: unclassified transcription discrepancy
note: The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: deleted 2 bases in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 28 ESTs, 6 Proteins, and 98% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XM_030964828.1
SIO_010081: HYOU1
subclass of: SO_0000673
so part of: HYOU1
location: complement(join(161688..162695,163136..163219,164044..164296,164750..164834,165129..165262,165600..165722,166226..166313,166486..166682,166839..167027,167177..167259,167569..167629,167731..167869,168116..168303,168636..168768,168869..168951,169833..169967,170370..170553,171320..171435,171986..172167,173065..173141,173237..173391,173624..173702,174468..174561,174738..174938))
location: region:161688-174938:-1
so has part: feature:174738-174938:-1:exon
so has part: feature:174468-174561:-1:exon
so has part: feature:173624-173702:-1:exon
so has part: feature:173237-173391:-1:exon
so has part: feature:173065-173141:-1:exon
so has part: feature:171986-172167:-1:exon
so has part: feature:171320-171435:-1:exon
so has part: feature:170370-170553:-1:exon
so has part: feature:169833-169967:-1:exon
so has part: feature:168869-168951:-1:exon
so has part: feature:168636-168768:-1:exon
so has part: feature:168116-168303:-1:exon
so has part: feature:167731-167869:-1:exon
so has part: feature:167569-167629:-1:exon
so has part: feature:167177-167259:-1:exon
so has part: feature:166839-167027:-1:exon
so has part: feature:166486-166682:-1:exon
so has part: feature:166226-166313:-1:exon
so has part: feature:165600-165722:-1:exon
so has part: feature:165129-165262:-1:exon
so has part: feature:164750-164834:-1:exon
so has part: feature:164044-164296:-1:exon
so has part: feature:163136-163219:-1:exon
so has part: feature:161688-162695:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:174738-174938:-1:exon

position:174738:-1
position: 174738
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:174468-174561:-1:exon

position:174468:-1
position: 174468
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:174561:-1
position: 174561
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:173624-173702:-1:exon

position:173624:-1
position: 173624
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:173702:-1
position: 173702
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:173237-173391:-1:exon

position:173237:-1
position: 173237
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:173391:-1
position: 173391
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:173065-173141:-1:exon

position:173065:-1
position: 173065
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:173141:-1
position: 173141
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:171986-172167:-1:exon

position:171986:-1
position: 171986
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:172167:-1
position: 172167
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:171320-171435:-1:exon

position:171320:-1
position: 171320
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:171435:-1
position: 171435
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:170370-170553:-1:exon

position:170370:-1
position: 170370
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:170553:-1
position: 170553
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:169833-169967:-1:exon

position:169833:-1
position: 169833
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:169967:-1
position: 169967
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:168869-168951:-1:exon

position:168869:-1
position: 168869
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:168951:-1
position: 168951
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:168636-168768:-1:exon

position:168636:-1
position: 168636
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:168768:-1
position: 168768
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:168116-168303:-1:exon

position:168116:-1
position: 168116
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:168303:-1
position: 168303
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:167731-167869:-1:exon

position:167731:-1
position: 167731
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:167869:-1
position: 167869
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:167569-167629:-1:exon

position:167569:-1
position: 167569
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:167629:-1
position: 167629
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:167177-167259:-1:exon

position:167177:-1
position: 167177
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:167259:-1
position: 167259
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:166839-167027:-1:exon

position:166839:-1
position: 166839
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:167027:-1
position: 167027
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:166486-166682:-1:exon

position:166486:-1
position: 166486
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:166682:-1
position: 166682
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:166226-166313:-1:exon

position:166226:-1
position: 166226
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:166313:-1
position: 166313
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:165600-165722:-1:exon

position:165600:-1
position: 165600
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:165722:-1
position: 165722
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:165129-165262:-1:exon

position:165129:-1
position: 165129
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:165262:-1
position: 165262
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:164750-164834:-1:exon

position:164750:-1
position: 164750
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:164834:-1
position: 164834
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 22
SIO_000628: feature:164044-164296:-1:exon

position:164044:-1
position: 164044
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:164296:-1
position: 164296
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 23
SIO_000628: feature:163136-163219:-1:exon

position:163136:-1
position: 163136
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:163219:-1
position: 163219
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 24
SIO_000628: feature:161688-162695:-1:exon

position:162695:-1
position: 162695
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

HYOU1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 87175
gene: HYOU1
exception: unclassified translation discrepancy
note: The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: deleted 2 bases in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: LOW QUALITY PROTEIN: hypoxia up-regulated protein 1
translation: MGACRVPAGGATRRGRRGGAAPRAGPSRVQPSLAERCPPSMARLPGRALPWLLLFSFLPAAEPVAVMSVDVGSESMKIAIVKPGVPMEIVLNKESRRKTPVAVSLKENERLFGDGALGMSIRTPKVAFRYFQDLLGKRIDNPHVALYQSRFPEHELVKDETRQTVIFRLSPTIWYSPEEMLGMVLNYSRGLAEEFAEQPIKDAVITVPAYFNQAERRAVLHAARMADLKVLQLINDNTAVALNYGVFRRKDINATAQNIMFYDMGAGSTVCTIVTYQTVKTKDSGTQPQLQIQGIGFDRTLGGLEMELRLRDYLAKLFNEQHPSKDVRKNPRAMAKLLKEANRLKTVLSANADHMAQIEGLLDDIDFKAKVSRQEFEDLCSDLFKRVPGPVQQALSSAEMNMDGIDQVILVGGATRVPKVQEVLLKAVGKEELGKNINADEAAAMGAVYQAAALSKAFKVKPFIVRDAAVFPIQVEFTREVEEDDKSRSLKHNKRILFQRMAPYPQRKVITFNRYTDDFEFYVNYGDLTFLSQDDLRVFGSLNLTTVRLKGVGDSFKKHLDYESKGIKAHFNMDESGVLSLDRVESVFETLVEDKLEEESTLTKLGNTISSLFGGGGPTPETGENLTDSVQEEEESLAETGKEEQGEKQDQKSHTVDADEEHGQENQQSPDQAETASPKVESERKEEGEKLEPQGPKENRESAKEEEPSKSSSDSTATKSEEEKIKAPKKQKLVHEITMELDVNDVPDLDEDELKSSMKKLQELTIRDLEKQEREKSANSLESFIFETQDKLYQEEYQFVSTEEQREEISKKLSEASSWMEEEGYAAATKELKDKLSELKKLCRNLFFRVEERRKWPERLAALESLLNHSTIFLRGARMIPESDQIFTEVELSTLEKAINETTIWKNETLAEQNKLTPTEKPVLLSKDIEFKIAALDREVQYLLNKAKFAKPKPKREKNATKTDSGKNTTAAPETENTIPPTEGKQGDKPEDIDPAKEPPTAEKAAIDDKPGSDSRSKKEKAEAGGESRKNDEL
SIO_010081: HYOU1
subclass of: SO_0000673
so part of: HYOU1
location: complement(join(162637..162695,163136..163219,164044..164296,164750..164834,165129..165262,165600..165722,166226..166313,166486..166682,166839..167027,167177..167259,167569..167629,167731..167869,168116..168303,168636..168768,168869..168951,169833..169967,170370..170553,171320..171435,171986..172167,173065..173141,173237..173391,173624..173702,174468..174561,174738..174923))
location: region:162637-174923:-1
so has part: feature:174738-174923:-1:exon
so has part: feature:174468-174561:-1:exon
so has part: feature:173624-173702:-1:exon
so has part: feature:173237-173391:-1:exon
so has part: feature:173065-173141:-1:exon
so has part: feature:171986-172167:-1:exon
so has part: feature:171320-171435:-1:exon
so has part: feature:170370-170553:-1:exon
so has part: feature:169833-169967:-1:exon
so has part: feature:168869-168951:-1:exon
so has part: feature:168636-168768:-1:exon
so has part: feature:168116-168303:-1:exon
so has part: feature:167731-167869:-1:exon
so has part: feature:167569-167629:-1:exon
so has part: feature:167177-167259:-1:exon
so has part: feature:166839-167027:-1:exon
so has part: feature:166486-166682:-1:exon
so has part: feature:166226-166313:-1:exon
so has part: feature:165600-165722:-1:exon
so has part: feature:165129-165262:-1:exon
so has part: feature:164750-164834:-1:exon
so has part: feature:164044-164296:-1:exon
so has part: feature:163136-163219:-1:exon
so has part: feature:162637-162695:-1:exon

XP_030820688.1
type: Protein
SIO_000068: ncbiprotein

position:162637:-1
position: 162637
reference: sequence
type: ReverseStrandPosition
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PHLDB1
type: Gene
subclass of: SO_0000704
RO_0002162: 87175
gene: PHLDB1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(175393..193932)
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so has part: feature:175393-193932:-1:exon
subclass of: SO_0000010

115913000
type: Gene
SIO_000068: ncbigene

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urn:…
SIO_000300: 1
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PHLDB1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 87175
gene: PHLDB1
product: pleckstrin homology like domain family B member 1, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 ESTs, 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_030964829.1
SIO_010081: PHLDB1
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SIO_000300: 18
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SIO_000300: 19
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SIO_000300: 20
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SIO_000300: 21
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SIO_000300: 22
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SIO_000300: 23
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SIO_000300: 25
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PHLDB1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 87175
gene: PHLDB1
product: pleckstrin homology like domain family B member 1, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 ESTs, 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_030964830.1
SIO_010081: PHLDB1
subclass of: SO_0000673
so part of: PHLDB1
location: complement(join(175394..176190,176452..176537,176614..176833,176969..177115,177197..177287,177393..177684,178324..178417,178520..178636,178919..179086,179477..179623,180943..181065,181581..181670,181817..181927,182027..182182,183386..183514,185376..185513,185619..185756,185830..186072,186812..187896,189247..189372,191209..191379,191447..191570,191984..192082,193275..193409))
location: region:175394-193409:-1
so has part: feature:193275-193409:-1:exon
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urn:…
SIO_000300: 1
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SIO_000300: 23
SIO_000628: feature:176452-176537:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:175394-176190:-1:exon

PHLDB1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 87175
gene: PHLDB1
product: pleckstrin homology like domain family B member 1, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 ESTs, 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_030964832.1
SIO_010081: PHLDB1
subclass of: SO_0000673
so part of: PHLDB1
location: complement(join(175396..176190,176452..176537,176614..176833,176969..177115,177197..177287,177393..177684,178324..178417,178520..178636,180943..181065,181581..181670,181817..181927,182027..182182,183386..183514,185376..185513,185619..185756,185830..186072,186812..187896,189247..189372,191209..191379,191447..191570,191984..192082,193275..193409))
location: region:175396-193409:-1
so has part: feature:193275-193409:-1:exon
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position:175396:-1
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reference: sequence
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urn:…
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PHLDB1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 87175
gene: PHLDB1
product: pleckstrin homology like domain family B member 1, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 4 ESTs, 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_030964831.1
SIO_010081: PHLDB1
subclass of: SO_0000673
so part of: PHLDB1
location: complement(join(175396..176190,176452..176537,176614..176833,176969..177115,177197..177287,177393..177684,178324..178417,178520..178636,180084..180221,180943..181065,181581..181670,181817..181927,182027..182182,183386..183514,185376..185513,185619..185756,185830..186072,186812..187896,189247..189372,191209..191379,191447..191570,191984..192082,193275..193409))
location: region:175396-193409:-1
so has part: feature:193275-193409:-1:exon
so has part: feature:191984-192082:-1:exon
so has part: feature:191447-191570:-1:exon
so has part: feature:191209-191379:-1:exon
so has part: feature:189247-189372:-1:exon
so has part: feature:186812-187896:-1:exon
so has part: feature:185830-186072:-1:exon
so has part: feature:185619-185756:-1:exon
so has part: feature:185376-185513:-1:exon
so has part: feature:183386-183514:-1:exon
so has part: feature:182027-182182:-1:exon
so has part: feature:181817-181927:-1:exon
so has part: feature:181581-181670:-1:exon
so has part: feature:180943-181065:-1:exon
so has part: feature:180084-180221:-1:exon
so has part: feature:178520-178636:-1:exon
so has part: feature:178324-178417:-1:exon
so has part: feature:177393-177684:-1:exon
so has part: feature:177197-177287:-1:exon
so has part: feature:176969-177115:-1:exon
so has part: feature:176614-176833:-1:exon
so has part: feature:176452-176537:-1:exon
so has part: feature:175396-176190:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:193275-193409:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:191984-192082:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:191447-191570:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:191209-191379:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:189247-189372:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:186812-187896:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:185830-186072:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:185619-185756:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:185376-185513:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:183386-183514:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:182027-182182:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:181817-181927:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:181581-181670:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:180943-181065:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:180084-180221:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:178520-178636:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:178324-178417:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:177393-177684:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:177197-177287:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:176969-177115:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:176614-176833:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:176452-176537:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:175396-176190:-1:exon

PHLDB1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 87175
gene: PHLDB1
product: pleckstrin homology like domain family B member 1, transcript variant X5
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 ESTs, 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_030964834.1
SIO_010081: PHLDB1
subclass of: SO_0000673
so part of: PHLDB1
location: complement(join(175397..176190,176452..176537,176614..176833,176969..177115,177197..177287,177393..177684,178324..178417,178520..178636,181581..181670,181817..181927,182027..182182,183386..183514,185376..185513,185619..185756,185830..186072,186812..187896,189247..189372,191209..191379,191447..191570,191984..192082,193275..193409))
location: region:175397-193409:-1
so has part: feature:193275-193409:-1:exon
so has part: feature:191984-192082:-1:exon
so has part: feature:191447-191570:-1:exon
so has part: feature:191209-191379:-1:exon
so has part: feature:189247-189372:-1:exon
so has part: feature:186812-187896:-1:exon
so has part: feature:185830-186072:-1:exon
so has part: feature:185619-185756:-1:exon
so has part: feature:185376-185513:-1:exon
so has part: feature:183386-183514:-1:exon
so has part: feature:182027-182182:-1:exon
so has part: feature:181817-181927:-1:exon
so has part: feature:181581-181670:-1:exon
so has part: feature:178520-178636:-1:exon
so has part: feature:178324-178417:-1:exon
so has part: feature:177393-177684:-1:exon
so has part: feature:177197-177287:-1:exon
so has part: feature:176969-177115:-1:exon
so has part: feature:176614-176833:-1:exon
so has part: feature:176452-176537:-1:exon
so has part: feature:175397-176190:-1:exon

position:175397:-1
position: 175397
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:193275-193409:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:191984-192082:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:191447-191570:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:191209-191379:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:189247-189372:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:186812-187896:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:185830-186072:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:185619-185756:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:185376-185513:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:183386-183514:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:182027-182182:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:181817-181927:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:181581-181670:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:178520-178636:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:178324-178417:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:177393-177684:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:177197-177287:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:176969-177115:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:176614-176833:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:176452-176537:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:175397-176190:-1:exon

PHLDB1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 87175
gene: PHLDB1
product: pleckstrin homology like domain family B member 1, transcript variant X6
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 ESTs, 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_030964835.1
SIO_010081: PHLDB1
subclass of: SO_0000673
so part of: PHLDB1
location: complement(join(175398..176190,176452..176537,176614..176833,176969..177115,177197..177287,177393..177684,178324..178417,178520..178636,181581..181670,181817..181927,182027..182182,185376..185513,185619..185756,185830..186072,186812..187896,189247..189372,191209..191379,191447..191570,191984..192082,193275..193409))
location: region:175398-193409:-1
so has part: feature:193275-193409:-1:exon
so has part: feature:191984-192082:-1:exon
so has part: feature:191447-191570:-1:exon
so has part: feature:191209-191379:-1:exon
so has part: feature:189247-189372:-1:exon
so has part: feature:186812-187896:-1:exon
so has part: feature:185830-186072:-1:exon
so has part: feature:185619-185756:-1:exon
so has part: feature:185376-185513:-1:exon
so has part: feature:182027-182182:-1:exon
so has part: feature:181817-181927:-1:exon
so has part: feature:181581-181670:-1:exon
so has part: feature:178520-178636:-1:exon
so has part: feature:178324-178417:-1:exon
so has part: feature:177393-177684:-1:exon
so has part: feature:177197-177287:-1:exon
so has part: feature:176969-177115:-1:exon
so has part: feature:176614-176833:-1:exon
so has part: feature:176452-176537:-1:exon
so has part: feature:175398-176190:-1:exon

position:175398:-1
position: 175398
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:193275-193409:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:191984-192082:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:191447-191570:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:191209-191379:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:189247-189372:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:186812-187896:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:185830-186072:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:185619-185756:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:185376-185513:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:182027-182182:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:181817-181927:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:181581-181670:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:178520-178636:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:178324-178417:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:177393-177684:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:177197-177287:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:176969-177115:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:176614-176833:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:176452-176537:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:175398-176190:-1:exon

PHLDB1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 87175
gene: PHLDB1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: pleckstrin homology-like domain family B member 1 isoform X6
translation: MLGSAAPQWPGNMGTLPRRVPLGTRTRRQPVSGTIRRLQEGTMEASGRTPISPTHRVQAVIQNSPLDLIDTGKGLKVQTEKPHLVSLGSGRLSTAVTLLPLEEGRTTIGTAGTDIVLQGAGLAPQHCYIENVRGTLTLHPCGNACAVDGVPLQRPTHLTQGCTICLGQATFLRFNHPAEAKWIKSMIPAGGRNPSALYGLPAKSEALVNGGHQLSERGCHSHSSLVSSIEKDLQDIMDSLVLEESASPGIQRPSACGRSPLSPVVNGGGRCLLSPPPSPGAASGGSSYENFSPLSSPASSSSYTSPSLSSQEQGPAVPPPLPLRSSSYNHTVQPPALPAGGSGEPWPAERLGDHRGGSPRLTPRVAPRPRVALQERPPSPFREPRDSLAPGRQPTSRAAPEARLQPPESPRVARRNLESMRELPPLSPSLSRRAASPRLAPDTPSPQPRLGREVPGSPRARRKGPEESKGAGGPSPPLLSENPTRRPSFSTCLSPTYGLGSPAVPSPRQSPRTPRKPLGDPRLPAGSRERKNSITEISDNEDELLEYHRRQRQERVREQEMERLERQRLETILNLCAEYTKTDGTEPGDVHRLLAGDTDAGQWVPRGAVPLGHAVEELQQRESVERSDEENLKEECSSTESTHHEHEKLTGPRAKEAQRLEEERAGVLGRLDQLKGRVKELEQQLQETSREAEMERALLQGERESEVVRLRQEQEAAQQLQEKLSSLDASIRKERDKEAEALETEAKLFEDLEFQQLERESHLEEEREARGQQLLQSRAECHRSIARRKERVAALDAQAAQIRLQSAQEAERLARERSSVLQLLQKEKEKLVSLERRYQLVTGGRSFPKMSSALREVYRAKAEGAAGVLTPRMKSGTPSSSQLNLSVLERSPSPKGPPSPVGSLSRNLVATLQDIETKRQLALQQKGRQVIEEQKRRLAELKQKAAAEAQSQWEALHGQPPFPTAFPRLVHHSILHHSRPHGAGPRAEELDHAYDTLSLESSDSMDTSISIGNNSACSPDNISSASGMETGKIEEMEKMLKEAHEEKSRLMESREREMELRQQALEDERWRREQLERRLQDETARRQKLVEKEVKLREKHFSQARPLTRYLPIRKEDFNLRLHIESSGHNVDTCYHIILTEKMCKGYLVKMGGKIKSWKKRWFVFDRMKRTLSYYVDKHETKLKGVIYFQAIEEVYYDHLRSAAKSPNPALTFCVKTHDRLYYMVAPSAEAMRIWMDVIVTGAEGYTQFMN
SIO_010081: PHLDB1
subclass of: SO_0000673
so part of: PHLDB1
location: complement(join(176050..176190,176452..176537,176614..176833,176969..177115,177197..177287,177393..177684,178324..178417,178520..178636,181581..181670,181817..181927,182027..182182,185376..185513,185619..185756,185830..186072,186812..187896,189247..189372,191209..191379,191447..191570,191984..192082,193275..193361))
location: region:176050-193361:-1
so has part: feature:193275-193361:-1:exon
so has part: feature:191984-192082:-1:exon
so has part: feature:191447-191570:-1:exon
so has part: feature:191209-191379:-1:exon
so has part: feature:189247-189372:-1:exon
so has part: feature:186812-187896:-1:exon
so has part: feature:185830-186072:-1:exon
so has part: feature:185619-185756:-1:exon
so has part: feature:185376-185513:-1:exon
so has part: feature:182027-182182:-1:exon
so has part: feature:181817-181927:-1:exon
so has part: feature:181581-181670:-1:exon
so has part: feature:178520-178636:-1:exon
so has part: feature:178324-178417:-1:exon
so has part: feature:177393-177684:-1:exon
so has part: feature:177197-177287:-1:exon
so has part: feature:176969-177115:-1:exon
so has part: feature:176614-176833:-1:exon
so has part: feature:176452-176537:-1:exon
so has part: feature:176050-176190:-1:exon

XP_030820695.1
type: Protein
SIO_000068: ncbiprotein

position:176050:-1
position: 176050
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:193361:-1
position: 193361
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:193275-193361:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:191984-192082:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:191447-191570:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:191209-191379:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:189247-189372:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:186812-187896:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:185830-186072:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:185619-185756:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:185376-185513:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:182027-182182:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:181817-181927:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:181581-181670:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:178520-178636:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:178324-178417:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:177393-177684:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:177197-177287:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:176969-177115:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:176614-176833:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:176452-176537:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:176050-176190:-1:exon

PHLDB1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 87175
gene: PHLDB1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: pleckstrin homology-like domain family B member 1 isoform X5
translation: MLGSAAPQWPGNMGTLPRRVPLGTRTRRQPVSGTIRRLQEGTMEASGRTPISPTHRVQAVIQNSPLDLIDTGKGLKVQTEKPHLVSLGSGRLSTAVTLLPLEEGRTTIGTAGTDIVLQGAGLAPQHCYIENVRGTLTLHPCGNACAVDGVPLQRPTHLTQGCTICLGQATFLRFNHPAEAKWIKSMIPAGGRNPSALYGLPAKSEALVNGGHQLSERGCHSHSSLVSSIEKDLQDIMDSLVLEESASPGIQRPSACGRSPLSPVVNGGGRCLLSPPPSPGAASGGSSYENFSPLSSPASSSSYTSPSLSSQEQGPAVPPPLPLRSSSYNHTVQPPALPAGGSGEPWPAERLGDHRGGSPRLTPRVAPRPRVALQERPPSPFREPRDSLAPGRQPTSRAAPEARLQPPESPRVARRNLESMRELPPLSPSLSRRAASPRLAPDTPSPQPRLGREVPGSPRARRKGPEESKGAGGPSPPLLSENPTRRPSFSTCLSPTYGLGSPAVPSPRQSPRTPRKPLGDPRLPAGSRERKNSITEISDNEDELLEYHRRQRQERVREQEMERLERQRLETILNLCAEYTKTDGTEPGDVHRLLAGDTDAGQWVPRGAVPLGHAVEELQQRESVERSDEENLKEECSSTESTHHEHEKLTGPRAKEAQRLEEERAGVLGRLDQLKGRVKELEQQLQETSREAEMERALLQGERESEVVRLRQEQEAAQQLQEKLSSLDASIRKERDKERAKVDAERKELEQLQALYHESKSHLAKCPESMREQLQEQMRREAEALETEAKLFEDLEFQQLERESHLEEEREARGQQLLQSRAECHRSIARRKERVAALDAQAAQIRLQSAQEAERLARERSSVLQLLQKEKEKLVSLERRYQLVTGGRSFPKMSSALREVYRAKAEGAAGVLTPRMKSGTPSSSQLNLSVLERSPSPKGPPSPVGSLSRNLVATLQDIETKRQLALQQKGRQVIEEQKRRLAELKQKAAAEAQSQWEALHGQPPFPTAFPRLVHHSILHHSRPHGAGPRAEELDHAYDTLSLESSDSMDTSISIGNNSACSPDNISSASGMETGKIEEMEKMLKEAHEEKSRLMESREREMELRQQALEDERWRREQLERRLQDETARRQKLVEKEVKLREKHFSQARPLTRYLPIRKEDFNLRLHIESSGHNVDTCYHIILTEKMCKGYLVKMGGKIKSWKKRWFVFDRMKRTLSYYVDKHETKLKGVIYFQAIEEVYYDHLRSAAKSPNPALTFCVKTHDRLYYMVAPSAEAMRIWMDVIVTGAEGYTQFMN
SIO_010081: PHLDB1
subclass of: SO_0000673
so part of: PHLDB1
location: complement(join(176050..176190,176452..176537,176614..176833,176969..177115,177197..177287,177393..177684,178324..178417,178520..178636,181581..181670,181817..181927,182027..182182,183386..183514,185376..185513,185619..185756,185830..186072,186812..187896,189247..189372,191209..191379,191447..191570,191984..192082,193275..193361))
location: region:176050-193361:-1
so has part: feature:193275-193361:-1:exon
so has part: feature:191984-192082:-1:exon
so has part: feature:191447-191570:-1:exon
so has part: feature:191209-191379:-1:exon
so has part: feature:189247-189372:-1:exon
so has part: feature:186812-187896:-1:exon
so has part: feature:185830-186072:-1:exon
so has part: feature:185619-185756:-1:exon
so has part: feature:185376-185513:-1:exon
so has part: feature:183386-183514:-1:exon
so has part: feature:182027-182182:-1:exon
so has part: feature:181817-181927:-1:exon
so has part: feature:181581-181670:-1:exon
so has part: feature:178520-178636:-1:exon
so has part: feature:178324-178417:-1:exon
so has part: feature:177393-177684:-1:exon
so has part: feature:177197-177287:-1:exon
so has part: feature:176969-177115:-1:exon
so has part: feature:176614-176833:-1:exon
so has part: feature:176452-176537:-1:exon
so has part: feature:176050-176190:-1:exon

XP_030820694.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:193275-193361:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:191984-192082:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:191447-191570:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:191209-191379:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:189247-189372:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:186812-187896:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:185830-186072:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:185619-185756:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:185376-185513:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:183386-183514:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:182027-182182:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:181817-181927:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:181581-181670:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:178520-178636:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:178324-178417:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:177393-177684:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:177197-177287:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:176969-177115:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:176614-176833:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:176452-176537:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:176050-176190:-1:exon

PHLDB1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 87175
gene: PHLDB1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: pleckstrin homology-like domain family B member 1 isoform X4
translation: MLGSAAPQWPGNMGTLPRRVPLGTRTRRQPVSGTIRRLQEGTMEASGRTPISPTHRVQAVIQNSPLDLIDTGKGLKVQTEKPHLVSLGSGRLSTAVTLLPLEEGRTTIGTAGTDIVLQGAGLAPQHCYIENVRGTLTLHPCGNACAVDGVPLQRPTHLTQGCTICLGQATFLRFNHPAEAKWIKSMIPAGGRNPSALYGLPAKSEALVNGGHQLSERGCHSHSSLVSSIEKDLQDIMDSLVLEESASPGIQRPSACGRSPLSPVVNGGGRCLLSPPPSPGAASGGSSYENFSPLSSPASSSSYTSPSLSSQEQGPAVPPPLPLRSSSYNHTVQPPALPAGGSGEPWPAERLGDHRGGSPRLTPRVAPRPRVALQERPPSPFREPRDSLAPGRQPTSRAAPEARLQPPESPRVARRNLESMRELPPLSPSLSRRAASPRLAPDTPSPQPRLGREVPGSPRARRKGPEESKGAGGPSPPLLSENPTRRPSFSTCLSPTYGLGSPAVPSPRQSPRTPRKPLGDPRLPAGSRERKNSITEISDNEDELLEYHRRQRQERVREQEMERLERQRLETILNLCAEYTKTDGTEPGDVHRLLAGDTDAGQWVPRGAVPLGHAVEELQQRESVERSDEENLKEECSSTESTHHEHEKLTGPRAKEAQRLEEERAGVLGRLDQLKGRVKELEQQLQETSREAEMERALLQGERESEVVRLRQEQEAAQQLQEKLSSLDASIRKERDKERAKVDAERKELEQLQALYHESKSHLAKCPESMREQLQEQMRREAEALETEAKLFEDLEFQQLERESHLEEEREARGQQLLQSRAECHRSIARRKERVAALDAQAAQIRLQSAQEAERLARERSSVLQLLQKEKEKLVSLERRYQLVTGGRSFPKMSSALREETLHISEPYELLEGPKPLSPLPAAAASLASPATYSYPKAQEVYRAKAEGAAGVLTPRMKSGTPSSSQLNLSVLERSPSPKGPPSPVGSLSRNLVATLQDIETKRQLALQQKGRQVIEEQKRRLAELKQKAAAEAQSQWEALHGQPPFPTAFPRLVHHSILHHSRPHGAGPRAEELDHAYDTLSLESSDSMDTSISIGNNSACSPDNISSASGMETGKIEEMEKMLKEAHEEKSRLMESREREMELRQQALEDERWRREQLERRLQDETARRQKLVEKEVKLREKHFSQARPLTRYLPIRKEDFNLRLHIESSGHNVDTCYHIILTEKMCKGYLVKMGGKIKSWKKRWFVFDRMKRTLSYYVDKHETKLKGVIYFQAIEEVYYDHLRSAAKSPNPALTFCVKTHDRLYYMVAPSAEAMRIWMDVIVTGAEGYTQFMN
SIO_010081: PHLDB1
subclass of: SO_0000673
so part of: PHLDB1
location: complement(join(176050..176190,176452..176537,176614..176833,176969..177115,177197..177287,177393..177684,178324..178417,178520..178636,180943..181065,181581..181670,181817..181927,182027..182182,183386..183514,185376..185513,185619..185756,185830..186072,186812..187896,189247..189372,191209..191379,191447..191570,191984..192082,193275..193361))
location: region:176050-193361:-1
so has part: feature:193275-193361:-1:exon
so has part: feature:191984-192082:-1:exon
so has part: feature:191447-191570:-1:exon
so has part: feature:191209-191379:-1:exon
so has part: feature:189247-189372:-1:exon
so has part: feature:186812-187896:-1:exon
so has part: feature:185830-186072:-1:exon
so has part: feature:185619-185756:-1:exon
so has part: feature:185376-185513:-1:exon
so has part: feature:183386-183514:-1:exon
so has part: feature:182027-182182:-1:exon
so has part: feature:181817-181927:-1:exon
so has part: feature:181581-181670:-1:exon
so has part: feature:180943-181065:-1:exon
so has part: feature:178520-178636:-1:exon
so has part: feature:178324-178417:-1:exon
so has part: feature:177393-177684:-1:exon
so has part: feature:177197-177287:-1:exon
so has part: feature:176969-177115:-1:exon
so has part: feature:176614-176833:-1:exon
so has part: feature:176452-176537:-1:exon
so has part: feature:176050-176190:-1:exon

XP_030820692.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:193275-193361:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:191984-192082:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:191447-191570:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:191209-191379:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:189247-189372:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:186812-187896:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:185830-186072:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:185619-185756:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:185376-185513:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:183386-183514:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:182027-182182:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:181817-181927:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:181581-181670:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:180943-181065:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:178520-178636:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:178324-178417:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:177393-177684:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:177197-177287:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:176969-177115:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:176614-176833:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:176452-176537:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:176050-176190:-1:exon

PHLDB1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 87175
gene: PHLDB1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: pleckstrin homology-like domain family B member 1 isoform X2
translation: MLGSAAPQWPGNMGTLPRRVPLGTRTRRQPVSGTIRRLQEGTMEASGRTPISPTHRVQAVIQNSPLDLIDTGKGLKVQTEKPHLVSLGSGRLSTAVTLLPLEEGRTTIGTAGTDIVLQGAGLAPQHCYIENVRGTLTLHPCGNACAVDGVPLQRPTHLTQGCTICLGQATFLRFNHPAEAKWIKSMIPAGGRNPSALYGLPAKSEALVNGGHQLSERGCHSHSSLVSSIEKDLQDIMDSLVLEESASPGIQRPSACGRSPLSPVVNGGGRCLLSPPPSPGAASGGSSYENFSPLSSPASSSSYTSPSLSSQEQGPAVPPPLPLRSSSYNHTVQPPALPAGGSGEPWPAERLGDHRGGSPRLTPRVAPRPRVALQERPPSPFREPRDSLAPGRQPTSRAAPEARLQPPESPRVARRNLESMRELPPLSPSLSRRAASPRLAPDTPSPQPRLGREVPGSPRARRKGPEESKGAGGPSPPLLSENPTRRPSFSTCLSPTYGLGSPAVPSPRQSPRTPRKPLGDPRLPAGSRERKNSITEISDNEDELLEYHRRQRQERVREQEMERLERQRLETILNLCAEYTKTDGTEPGDVHRLLAGDTDAGQWVPRGAVPLGHAVEELQQRESVERSDEENLKEECSSTESTHHEHEKLTGPRAKEAQRLEEERAGVLGRLDQLKGRVKELEQQLQETSREAEMERALLQGERESEVVRLRQEQEAAQQLQEKLSSLDASIRKERDKERAKVDAERKELEQLQALYHESKSHLAKCPESMREQLQEQMRREAEALETEAKLFEDLEFQQLERESHLEEEREARGQQLLQSRAECHRSIARRKERVAALDAQAAQIRLQSAQEAERLARERSSVLQLLQKEKEKLVSLERRYQLVTGGRSFPKMSSALREETLHISEPYELLEGPKPLSPLPAAAASLASPATYSYPKAQEYVTVEQLSGILGSLHTPAASLLGCTPPAPSSSGCAPPLPSLPSPFVSAEMEQQLLGGPVCLPALDLEKWYQEVMAGFETSSSSVSPSSSPPPLPAKAHSSHKALQVYRAKAEGAAGVLTPRMKSGTPSSSQLNLSVLERSPSPKGPPSPVGSLSRNLVATLQDIETKRQLALQQKGRQVIEEQKRRLAELKQKAAAEAQSQWEALHGQPPFPTAFPRLVHHSILHHSRPHGAGPRAEELDHAYDTLSLESSDSMDTSISIGNNSACSPDNISSASGMETGKIEEMEKMLKEAHEEKSRLMESREREMELRQQALEDERWRREQLERRLQDETARRQKLVEKEVKLREKHFSQARPLTRYLPIRKEDFNLRLHIESSGHNVDTCYHIILTEKMCKGYLVKMGGKIKSWKKRWFVFDRMKRTLSYYVDKHETKLKGVIYFQAIEEVYYDHLRSAAKSPNPALTFCVKTHDRLYYMVAPSAEAMRIWMDVIVTGAEGYTQFMN
SIO_010081: PHLDB1
subclass of: SO_0000673
so part of: PHLDB1
location: complement(join(176050..176190,176452..176537,176614..176833,176969..177115,177197..177287,177393..177684,178324..178417,178520..178636,178919..179086,179477..179623,180943..181065,181581..181670,181817..181927,182027..182182,183386..183514,185376..185513,185619..185756,185830..186072,186812..187896,189247..189372,191209..191379,191447..191570,191984..192082,193275..193361))
location: region:176050-193361:-1
so has part: feature:193275-193361:-1:exon
so has part: feature:191984-192082:-1:exon
so has part: feature:191447-191570:-1:exon
so has part: feature:191209-191379:-1:exon
so has part: feature:189247-189372:-1:exon
so has part: feature:186812-187896:-1:exon
so has part: feature:185830-186072:-1:exon
so has part: feature:185619-185756:-1:exon
so has part: feature:185376-185513:-1:exon
so has part: feature:183386-183514:-1:exon
so has part: feature:182027-182182:-1:exon
so has part: feature:181817-181927:-1:exon
so has part: feature:181581-181670:-1:exon
so has part: feature:180943-181065:-1:exon
so has part: feature:179477-179623:-1:exon
so has part: feature:178919-179086:-1:exon
so has part: feature:178520-178636:-1:exon
so has part: feature:178324-178417:-1:exon
so has part: feature:177393-177684:-1:exon
so has part: feature:177197-177287:-1:exon
so has part: feature:176969-177115:-1:exon
so has part: feature:176614-176833:-1:exon
so has part: feature:176452-176537:-1:exon
so has part: feature:176050-176190:-1:exon

XP_030820690.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:193275-193361:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:191984-192082:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:191447-191570:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:191209-191379:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:189247-189372:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:186812-187896:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:185830-186072:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:185619-185756:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:185376-185513:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:183386-183514:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:182027-182182:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:181817-181927:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:181581-181670:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:180943-181065:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:179477-179623:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:178919-179086:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:178520-178636:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:178324-178417:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:177393-177684:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:177197-177287:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:176969-177115:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:176614-176833:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:176452-176537:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:176050-176190:-1:exon

PHLDB1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 87175
gene: PHLDB1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: pleckstrin homology-like domain family B member 1 isoform X3
translation: MLGSAAPQWPGNMGTLPRRVPLGTRTRRQPVSGTIRRLQEGTMEASGRTPISPTHRVQAVIQNSPLDLIDTGKGLKVQTEKPHLVSLGSGRLSTAVTLLPLEEGRTTIGTAGTDIVLQGAGLAPQHCYIENVRGTLTLHPCGNACAVDGVPLQRPTHLTQGCTICLGQATFLRFNHPAEAKWIKSMIPAGGRNPSALYGLPAKSEALVNGGHQLSERGCHSHSSLVSSIEKDLQDIMDSLVLEESASPGIQRPSACGRSPLSPVVNGGGRCLLSPPPSPGAASGGSSYENFSPLSSPASSSSYTSPSLSSQEQGPAVPPPLPLRSSSYNHTVQPPALPAGGSGEPWPAERLGDHRGGSPRLTPRVAPRPRVALQERPPSPFREPRDSLAPGRQPTSRAAPEARLQPPESPRVARRNLESMRELPPLSPSLSRRAASPRLAPDTPSPQPRLGREVPGSPRARRKGPEESKGAGGPSPPLLSENPTRRPSFSTCLSPTYGLGSPAVPSPRQSPRTPRKPLGDPRLPAGSRERKNSITEISDNEDELLEYHRRQRQERVREQEMERLERQRLETILNLCAEYTKTDGTEPGDVHRLLAGDTDAGQWVPRGAVPLGHAVEELQQRESVERSDEENLKEECSSTESTHHEHEKLTGPRAKEAQRLEEERAGVLGRLDQLKGRVKELEQQLQETSREAEMERALLQGERESEVVRLRQEQEAAQQLQEKLSSLDASIRKERDKERAKVDAERKELEQLQALYHESKSHLAKCPESMREQLQEQMRREAEALETEAKLFEDLEFQQLERESHLEEEREARGQQLLQSRAECHRSIARRKERVAALDAQAAQIRLQSAQEAERLARERSSVLQLLQKEKEKLVSLERRYQLVTGGRSFPKMSSALREETLHISEPYELLEGPKPLSPLPAAAASLASPATYSYPKAQEEYMRLSDVFRFCSNAHGPSLDTKASAAAPAAAQSSFLLAVAPTANEVYRAKAEGAAGVLTPRMKSGTPSSSQLNLSVLERSPSPKGPPSPVGSLSRNLVATLQDIETKRQLALQQKGRQVIEEQKRRLAELKQKAAAEAQSQWEALHGQPPFPTAFPRLVHHSILHHSRPHGAGPRAEELDHAYDTLSLESSDSMDTSISIGNNSACSPDNISSASGMETGKIEEMEKMLKEAHEEKSRLMESREREMELRQQALEDERWRREQLERRLQDETARRQKLVEKEVKLREKHFSQARPLTRYLPIRKEDFNLRLHIESSGHNVDTCYHIILTEKMCKGYLVKMGGKIKSWKKRWFVFDRMKRTLSYYVDKHETKLKGVIYFQAIEEVYYDHLRSAAKSPNPALTFCVKTHDRLYYMVAPSAEAMRIWMDVIVTGAEGYTQFMN
SIO_010081: PHLDB1
subclass of: SO_0000673
so part of: PHLDB1
location: complement(join(176050..176190,176452..176537,176614..176833,176969..177115,177197..177287,177393..177684,178324..178417,178520..178636,180084..180221,180943..181065,181581..181670,181817..181927,182027..182182,183386..183514,185376..185513,185619..185756,185830..186072,186812..187896,189247..189372,191209..191379,191447..191570,191984..192082,193275..193361))
location: region:176050-193361:-1
so has part: feature:193275-193361:-1:exon
so has part: feature:191984-192082:-1:exon
so has part: feature:191447-191570:-1:exon
so has part: feature:191209-191379:-1:exon
so has part: feature:189247-189372:-1:exon
so has part: feature:186812-187896:-1:exon
so has part: feature:185830-186072:-1:exon
so has part: feature:185619-185756:-1:exon
so has part: feature:185376-185513:-1:exon
so has part: feature:183386-183514:-1:exon
so has part: feature:182027-182182:-1:exon
so has part: feature:181817-181927:-1:exon
so has part: feature:181581-181670:-1:exon
so has part: feature:180943-181065:-1:exon
so has part: feature:180084-180221:-1:exon
so has part: feature:178520-178636:-1:exon
so has part: feature:178324-178417:-1:exon
so has part: feature:177393-177684:-1:exon
so has part: feature:177197-177287:-1:exon
so has part: feature:176969-177115:-1:exon
so has part: feature:176614-176833:-1:exon
so has part: feature:176452-176537:-1:exon
so has part: feature:176050-176190:-1:exon

XP_030820691.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:193275-193361:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:191984-192082:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:191447-191570:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:191209-191379:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:189247-189372:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:186812-187896:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:185830-186072:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:185619-185756:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:185376-185513:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:183386-183514:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:182027-182182:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:181817-181927:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:181581-181670:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:180943-181065:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:180084-180221:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:178520-178636:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:178324-178417:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:177393-177684:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:177197-177287:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:176969-177115:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:176614-176833:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:176452-176537:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:176050-176190:-1:exon

PHLDB1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 87175
gene: PHLDB1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: pleckstrin homology-like domain family B member 1 isoform X1
translation: MEASGRTPISPTHRVQAVIQNSPLDLIDTGKGLKVQTEKPHLVSLGSGRLSTAVTLLPLEEGRTTIGTAGTDIVLQGAGLAPQHCYIENVRGTLTLHPCGNACAVDGVPLQRPTHLTQGCTICLGQATFLRFNHPAEAKWIKSMIPAGGRNPSALYGLPAKSEALVNGGHQLSERGCHSHSSLVSSIEKDLQDIMDSLVLEESASPGIQRPSACGRSPLSPVVNGGGRCLLSPPPSPGAASGGSSYENFSPLSSPASSSSYTSPSLSSQEQGPAVPPPLPLRSSSYNHTVQPPALPAGGSGEPWPAERLGDHRGGSPRLTPRVAPRPRVALQERPPSPFREPRDSLAPGRQPTSRAAPEARLQPPESPRVARRNLESMRELPPLSPSLSRRAASPRLAPDTPSPQPRLGREVPGSPRARRKGPEESKGAGGPSPPLLSENPTRRPSFSTCLSPTYGLGSPAVPSPRQSPRTPRKPLGDPRLPAGSRERKNSITEISDNEDELLEYHRRQRQERVREQEMERLERQRLETILNLCAEYTKTDGTEPGDVHRLLAGDTDAGQWVPRGAVPLGHAVEELQQRESVERSDEENLKEECSSTESTHHEHEKLTGPRAKEAQRLEEERAGVLGRLDQLKGRVKELEQQLQETSREAEMERALLQGERESEVVRLRQEQEAAQQLQEKLSSLDASIRKERDKERAKVDAERKELEQLQALYHESKSHLAKCPESMREQLQEQMRREAEALETEAKLFEDLEFQQLERESHLEEEREARGQQLLQSRAECHRSIARRKERVAALDAQAAQIRLQSAQEAERLARERSSVLQLLQKEKEKLVSLERRYQLVTGGRSFPKMSSALREETLHISEPYELLEGPKPLSPLPAAAASLASPATYSYPKAQEEYMRLSDVFRFCSNAHGPSLDTKASAAAPAAAQSSFLLAVAPTANEYVTVEQLSGILGSLHTPAASLLGCTPPAPSSSGCAPPLPSLPSPFVSAEMEQQLLGGPVCLPALDLEKWYQEVMAGFETSSSSVSPSSSPPPLPAKAHSSHKALQVYRAKAEGAAGVLTPRMKSGTPSSSQLNLSVLERSPSPKGPPSPVGSLSRNLVATLQDIETKRQLALQQKGRQVIEEQKRRLAELKQKAAAEAQSQWEALHGQPPFPTAFPRLVHHSILHHSRPHGAGPRAEELDHAYDTLSLESSDSMDTSISIGNNSACSPDNISSASGMETGKIEEMEKMLKEAHEEKSRLMESREREMELRQQALEDERWRREQLERRLQDETARRQKLVEKEVKLREKHFSQARPLTRYLPIRKEDFNLRLHIESSGHNVDTCYHIILTEKMCKGYLVKMGGKIKSWKKRWFVFDRMKRTLSYYVDKHETKLKGVIYFQAIEEVYYDHLRSAAKSPNPALTFCVKTHDRLYYMVAPSAEAMRIWMDVIVTGAEGYTQFMN
SIO_010081: PHLDB1
subclass of: SO_0000673
so part of: PHLDB1
location: complement(join(176050..176190,176452..176537,176614..176833,176969..177115,177197..177287,177393..177684,178324..178417,178520..178636,178919..179086,179477..179623,180084..180221,180943..181065,181581..181670,181817..181927,182027..182182,183386..183514,185376..185513,185619..185756,185830..186072,186812..187896,189247..189372,191209..191379,191447..191570,191984..192043))
location: region:176050-192043:-1
so has part: feature:191984-192043:-1:exon
so has part: feature:191447-191570:-1:exon
so has part: feature:191209-191379:-1:exon
so has part: feature:189247-189372:-1:exon
so has part: feature:186812-187896:-1:exon
so has part: feature:185830-186072:-1:exon
so has part: feature:185619-185756:-1:exon
so has part: feature:185376-185513:-1:exon
so has part: feature:183386-183514:-1:exon
so has part: feature:182027-182182:-1:exon
so has part: feature:181817-181927:-1:exon
so has part: feature:181581-181670:-1:exon
so has part: feature:180943-181065:-1:exon
so has part: feature:180084-180221:-1:exon
so has part: feature:179477-179623:-1:exon
so has part: feature:178919-179086:-1:exon
so has part: feature:178520-178636:-1:exon
so has part: feature:178324-178417:-1:exon
so has part: feature:177393-177684:-1:exon
so has part: feature:177197-177287:-1:exon
so has part: feature:176969-177115:-1:exon
so has part: feature:176614-176833:-1:exon
so has part: feature:176452-176537:-1:exon
so has part: feature:176050-176190:-1:exon

XP_030820689.1
type: Protein
SIO_000068: ncbiprotein

position:192043:-1
position: 192043
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:191984-192043:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:191447-191570:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:191209-191379:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:189247-189372:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:186812-187896:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:185830-186072:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:185619-185756:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:185376-185513:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:183386-183514:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:182027-182182:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:181817-181927:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:181581-181670:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:180943-181065:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:180084-180221:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:179477-179623:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:178919-179086:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:178520-178636:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:178324-178417:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:177393-177684:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:177197-177287:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:176969-177115:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:176614-176833:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:176452-176537:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:176050-176190:-1:exon

ARCN1
type: Gene
subclass of: SO_0000704
RO_0002162: 87175
gene: ARCN1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(196949..205269)
location: region:196949-205269:-1
so has part: feature:196949-205269:-1:exon
subclass of: SO_0000010

115913069
type: Gene
SIO_000068: ncbigene

position:196949:-1
position: 196949
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:205269:-1
position: 205269
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:196949-205269:-1:exon

ARCN1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 87175
gene: ARCN1
product: archain 1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 mRNAs, 61 ESTs, 17 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
transcript id: XM_030964937.1
SIO_010081: ARCN1
subclass of: SO_0000673
so part of: ARCN1
location: complement(join(196949..198515,199064..199268,199420..199528,199840..199987,201223..201388,202020..202181,202592..202794,203036..203215,203811..204074,205136..205269))
location: region:196949-205269:-1
so has part: feature:205136-205269:-1:exon
so has part: feature:203811-204074:-1:exon
so has part: feature:203036-203215:-1:exon
so has part: feature:202592-202794:-1:exon
so has part: feature:202020-202181:-1:exon
so has part: feature:201223-201388:-1:exon
so has part: feature:199840-199987:-1:exon
so has part: feature:199420-199528:-1:exon
so has part: feature:199064-199268:-1:exon
so has part: feature:196949-198515:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:205136-205269:-1:exon

position:205136:-1
position: 205136
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:203811-204074:-1:exon

position:203811:-1
position: 203811
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:204074:-1
position: 204074
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:203036-203215:-1:exon

position:203036:-1
position: 203036
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:203215:-1
position: 203215
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:202592-202794:-1:exon

position:202592:-1
position: 202592
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:202794:-1
position: 202794
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:202020-202181:-1:exon

position:202020:-1
position: 202020
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:202181:-1
position: 202181
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:201223-201388:-1:exon

position:201223:-1
position: 201223
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:201388:-1
position: 201388
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:199840-199987:-1:exon

position:199840:-1
position: 199840
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:199987:-1
position: 199987
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:199420-199528:-1:exon

position:199420:-1
position: 199420
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:199528:-1
position: 199528
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:199064-199268:-1:exon

position:199064:-1
position: 199064
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:199268:-1
position: 199268
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:196949-198515:-1:exon

position:198515:-1
position: 198515
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

ARCN1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 87175
gene: ARCN1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: coatomer subunit delta
translation: MVLLAAAVCTKAGKAIVSRQFVEMTRTRIEGLLAAFPKLMNTGKQHTFVETESVRYVYQPMEKLYMVLITTKNSNILEDLETLRLFSRVIPEYCRALEENEISEHCFDLIFAFDEIVALGYRENVNLAQIRTFTEMDSHEEKVFRAVRETQEREAKAEMRRKAKELQQARRDAERHGKKAPGFGGFGSSAVSGGVTAMITETIIETEKPKVAPAPARPSGPSKALKLGAKGKEVDNFVDKLKSEGENIMTSVGKRSAEAAKVLTSPINMESVHMKIEEKISLTCGRDGGLQNMELHGMIMLHISDEKFARIRLHVENEDKRGVQLQTHPNVDKKLFTTESQIGLKNPEKSFPINSDVGVLKWRLQTTEESFIPLTINCWPSESGNSCDVNIEYELQEESLELNDVIITIPLPSGVGAPVIGEIDGEYRHDSRRNLLEWCLPVIDAKNKSGSLEFSIAGQPNDFFPVQVSFVSKKNYCNIQVTKVTQVDGNSPVRFSTETTFLVDKYEIL
SIO_010081: ARCN1
subclass of: SO_0000673
so part of: ARCN1
location: complement(join(198426..198515,199064..199268,199420..199528,199840..199987,201223..201388,202020..202181,202592..202794,203036..203215,203811..204074,205136..205138))
location: region:198426-205138:-1
so has part: feature:205136-205138:-1:exon
so has part: feature:203811-204074:-1:exon
so has part: feature:203036-203215:-1:exon
so has part: feature:202592-202794:-1:exon
so has part: feature:202020-202181:-1:exon
so has part: feature:201223-201388:-1:exon
so has part: feature:199840-199987:-1:exon
so has part: feature:199420-199528:-1:exon
so has part: feature:199064-199268:-1:exon
so has part: feature:198426-198515:-1:exon

XP_030820797.1
type: Protein
SIO_000068: ncbiprotein

position:198426:-1
position: 198426
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:205138:-1
position: 205138
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:205136-205138:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:203811-204074:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:203036-203215:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:202592-202794:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:202020-202181:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:201223-201388:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:199840-199987:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:199420-199528:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:199064-199268:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:198426-198515:-1:exon

IFT46
type: Gene
subclass of: SO_0000704
RO_0002162: 87175
gene: IFT46
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 205347..209167
location: region:205347-209167:1
so has part: feature:205347-209167:1:exon
subclass of: SO_0000010

115913157
type: Gene
SIO_000068: ncbigene

position:205347:1
position: 205347
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:209167:1
position: 209167
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:205347-209167:1:exon

IFT46
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 87175
gene: IFT46
product: intraflagellar transport 46
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 2 ESTs, 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_030965077.1
SIO_010081: IFT46
subclass of: SO_0000673
so part of: IFT46
location: join(205347..205398,205577..205744,205818..205954,206198..206272,206371..206464,206794..206922,207305..207426,207509..207575,207815..207875,208150..208235,208570..209167)
location: region:205347-209167:1
so has part: feature:205347-205398:1:exon
so has part: feature:205577-205744:1:exon
so has part: feature:205818-205954:1:exon
so has part: feature:206198-206272:1:exon
so has part: feature:206371-206464:1:exon
so has part: feature:206794-206922:1:exon
so has part: feature:207305-207426:1:exon
so has part: feature:207509-207575:1:exon
so has part: feature:207815-207875:1:exon
so has part: feature:208150-208235:1:exon
so has part: feature:208570-209167:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:205347-205398:1:exon

position:205398:1
position: 205398
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:205577-205744:1:exon

position:205577:1
position: 205577
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:205744:1
position: 205744
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:205818-205954:1:exon

position:205818:1
position: 205818
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:205954:1
position: 205954
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:206198-206272:1:exon

position:206198:1
position: 206198
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:206272:1
position: 206272
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:206371-206464:1:exon

position:206371:1
position: 206371
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:206464:1
position: 206464
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:206794-206922:1:exon

position:206794:1
position: 206794
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:206922:1
position: 206922
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:207305-207426:1:exon

position:207305:1
position: 207305
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:207426:1
position: 207426
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:207509-207575:1:exon

position:207509:1
position: 207509
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:207575:1
position: 207575
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:207815-207875:1:exon

position:207815:1
position: 207815
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:207875:1
position: 207875
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:208150-208235:1:exon

position:208150:1
position: 208150
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:208235:1
position: 208235
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:208570-209167:1:exon

position:208570:1
position: 208570
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

IFT46
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 87175
gene: IFT46
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: intraflagellar transport protein 46 homolog
translation: MATAAAAARREARRAEPRPVENQPYDESLELPEADPGARSPRAGTAGRLRDSRRPGVSIGAAGSGGRGSGGKEEAAAQLPGPAAFSEDDDEDDEDSEEDSSESDSEEDSEEHGAALEGDFNPADFDYLQVSSEIKDLFEYIKRYTPKTIEIEHKLQPFIPDFIPAVGDIDAFLKVPRPDGKPDNLGLLVLDEPSTKQSDPTVLSLWLTENSKQHNITQQIKVKSLENAENNPKAIESWIESISELHRFKPPATVHYSRPMPDIETLMQEWSPEFEELLGKVGLPSAEMSCDLAEYIDMICAILDIPVYKSRIHPLHVLFSLFLEFKNSQHFKPLADGQKGRSPPSNPPSQAAEAEVLSFN
SIO_010081: IFT46
subclass of: SO_0000673
so part of: IFT46
location: join(205351..205398,205577..205744,205818..205954,206198..206272,206371..206464,206794..206922,207305..207426,207509..207575,207815..207875,208150..208235,208570..208665)
location: region:205351-208665:1
so has part: feature:205351-205398:1:exon
so has part: feature:205577-205744:1:exon
so has part: feature:205818-205954:1:exon
so has part: feature:206198-206272:1:exon
so has part: feature:206371-206464:1:exon
so has part: feature:206794-206922:1:exon
so has part: feature:207305-207426:1:exon
so has part: feature:207509-207575:1:exon
so has part: feature:207815-207875:1:exon
so has part: feature:208150-208235:1:exon
so has part: feature:208570-208665:1:exon

XP_030820937.1
type: Protein
SIO_000068: ncbiprotein

position:205351:1
position: 205351
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:208665:1
position: 208665
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:205351-205398:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:205577-205744:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:205818-205954:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:206198-206272:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:206371-206464:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:206794-206922:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:207305-207426:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:207509-207575:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:207815-207875:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:208150-208235:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:208570-208665:1:exon

TMEM25
type: Gene
subclass of: SO_0000704
RO_0002162: 87175
gene: TMEM25
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(209117..211499)
location: region:209117-211499:-1
so has part: feature:209117-211499:-1:exon
subclass of: SO_0000010

115913156
type: Gene
SIO_000068: ncbigene

position:209117:-1
position: 209117
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:211499:-1
position: 211499
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:209117-211499:-1:exon

TMEM25
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 87175
gene: TMEM25
product: transmembrane protein 25, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_030965073.1
SIO_010081: TMEM25
subclass of: SO_0000673
so part of: TMEM25
location: complement(join(209117..209613,209710..209796,209898..210179,210253..210543,210781..211020,211149..211255,211362..211499))
location: region:209117-211499:-1
so has part: feature:211362-211499:-1:exon
so has part: feature:211149-211255:-1:exon
so has part: feature:210781-211020:-1:exon
so has part: feature:210253-210543:-1:exon
so has part: feature:209898-210179:-1:exon
so has part: feature:209710-209796:-1:exon
so has part: feature:209117-209613:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:211362-211499:-1:exon

position:211362:-1
position: 211362
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:211149-211255:-1:exon

position:211149:-1
position: 211149
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:211255:-1
position: 211255
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:210781-211020:-1:exon

position:210781:-1
position: 210781
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:211020:-1
position: 211020
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:210253-210543:-1:exon

position:210253:-1
position: 210253
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:210543:-1
position: 210543
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:209898-210179:-1:exon

position:209898:-1
position: 209898
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:210179:-1
position: 210179
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:209710-209796:-1:exon

position:209710:-1
position: 209710
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:209796:-1
position: 209796
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:209117-209613:-1:exon

position:209613:-1
position: 209613
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

TMEM25
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 87175
gene: TMEM25
product: transmembrane protein 25, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_030965076.1
SIO_010081: TMEM25
subclass of: SO_0000673
so part of: TMEM25
location: complement(join(209117..209613,209710..209796,210253..210543,210781..211065,211149..211255,211362..211499))
location: region:209117-211499:-1
so has part: feature:211362-211499:-1:exon
so has part: feature:211149-211255:-1:exon
so has part: feature:210781-211065:-1:exon
so has part: feature:210253-210543:-1:exon
so has part: feature:209710-209796:-1:exon
so has part: feature:209117-209613:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:211362-211499:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:211149-211255:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:210781-211065:-1:exon

position:211065:-1
position: 211065
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:210253-210543:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:209710-209796:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:209117-209613:-1:exon

TMEM25
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 87175
gene: TMEM25
product: transmembrane protein 25, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XM_030965072.1
SIO_010081: TMEM25
subclass of: SO_0000673
so part of: TMEM25
location: complement(join(209117..209613,209710..209796,209898..210179,210253..210543,210781..211065,211149..211255,211362..211499))
location: region:209117-211499:-1
so has part: feature:211362-211499:-1:exon
so has part: feature:211149-211255:-1:exon
so has part: feature:210781-211065:-1:exon
so has part: feature:210253-210543:-1:exon
so has part: feature:209898-210179:-1:exon
so has part: feature:209710-209796:-1:exon
so has part: feature:209117-209613:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:211362-211499:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:211149-211255:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:210781-211065:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:210253-210543:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:209898-210179:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:209710-209796:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:209117-209613:-1:exon

TMEM25
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 87175
gene: TMEM25
product: transmembrane protein 25, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_030965074.1
SIO_010081: TMEM25
subclass of: SO_0000673
so part of: TMEM25
location: complement(join(209117..209613,209710..209796,209898..210179,210253..210543,210781..211006,211362..211488))
location: region:209117-211488:-1
so has part: feature:211362-211488:-1:exon
so has part: feature:210781-211006:-1:exon
so has part: feature:210253-210543:-1:exon
so has part: feature:209898-210179:-1:exon
so has part: feature:209710-209796:-1:exon
so has part: feature:209117-209613:-1:exon

position:211488:-1
position: 211488
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:211362-211488:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:210781-211006:-1:exon

position:211006:-1
position: 211006
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:210253-210543:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:209898-210179:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:209710-209796:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:209117-209613:-1:exon

TMEM25
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 87175
gene: TMEM25
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: transmembrane protein 25 isoform X3
translation: MVAAMLQEGESRIFTCWVPRPAPGATLAWYLNGQKQEVNLSTADTASILTLTGQRSDYQLNCSLTIPTSSESYNTSILLNVQYKPEILQKGAHYQQAEGAGLLLVLFVLVQANSPASITWMHQDGHVMANTSKFLLLGATTYPGLANHSLHIHLNCTAGNLSISAANSGGITTASLLPTGLLDARVELPVLGVAIGAALALSALLSLGSCAACLACRLPKLVRGLGQAGPSPSIQCSHCSSSEPPQPQGTRLPRQTQSLPPNLRLGDLAQEDGASPKDAGASARGEESALLGLENSLVLSKLGFIQLPVSGRIYKVPSMSSDEIWL
SIO_010081: TMEM25
subclass of: SO_0000673
so part of: TMEM25
location: complement(join(209540..209613,209710..209796,209898..210179,210253..210543,210781..211006,211362..211382))
location: region:209540-211382:-1
so has part: feature:211362-211382:-1:exon
so has part: feature:210781-211006:-1:exon
so has part: feature:210253-210543:-1:exon
so has part: feature:209898-210179:-1:exon
so has part: feature:209710-209796:-1:exon
so has part: feature:209540-209613:-1:exon

XP_030820934.1
type: Protein
SIO_000068: ncbiprotein

position:209540:-1
position: 209540
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:211382:-1
position: 211382
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:211362-211382:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:210781-211006:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:210253-210543:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:209898-210179:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:209710-209796:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:209540-209613:-1:exon

TMEM25
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 87175
gene: TMEM25
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: transmembrane protein 25 isoform X2
translation: MGCASGWPGAALAVLLLLLLSLLALCLAVCTLQEGESRIFTCWVPRPAPGATLAWYLNGQKQEVNLSTADTASILTLTGQRSDYQLNCSLTIPTSSESYNTSILLNVQYKPEILQKGAHYQQAEGAGLLLVLFVLVQANSPASITWMHQDGHVMANTSKFLLLGATTYPGLANHSLHIHLNCTAGNLSISAANSGGITTASLLPTGLLDARVELPVLGVAIGAALALSALLSLGSCAACLACRLPKLVRGLGQAGPSPSIQCSHCSSSEPPQPQGTRLPRQTQSLPPNLRLGDLAQEDGASPKDAGASARGEESALLGLENSLVLSKLGFIQLPVSGRIYKVPSMSSDEIWL
SIO_010081: TMEM25
subclass of: SO_0000673
so part of: TMEM25
location: complement(join(209540..209613,209710..209796,209898..210179,210253..210543,210781..211020,211149..211233))
location: region:209540-211233:-1
so has part: feature:211149-211233:-1:exon
so has part: feature:210781-211020:-1:exon
so has part: feature:210253-210543:-1:exon
so has part: feature:209898-210179:-1:exon
so has part: feature:209710-209796:-1:exon
so has part: feature:209540-209613:-1:exon

XP_030820933.1
type: Protein
SIO_000068: ncbiprotein

position:211233:-1
position: 211233
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:211149-211233:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:210781-211020:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:210253-210543:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:209898-210179:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:209710-209796:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:209540-209613:-1:exon

TMEM25
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 87175
gene: TMEM25
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: transmembrane protein 25 isoform X4
translation: MGCASGWPGAALAVLLLLLLSLLALCLAALEELDPTTERQPRTVCTLQEGESRIFTCWVPRPAPGATLAWYLNGQKQEVNLSTADTASILTLTGQRSDYQLNCSLTIPTSSESYNTSILLNVQYKPEILQKGAHYQQAEGAGLLLVLFVLVQANSPASITWMHQDGHVMANTSKFLLLGATTYPGLANHSLHIHLNCTAGNLSISAANSGGITTASLLPTASPKDAGASARGEESALLGLENSLVLSKLGFIQLPVSGRIYKVPSMSSDEIWL
SIO_010081: TMEM25
subclass of: SO_0000673
so part of: TMEM25
location: complement(join(209540..209613,209710..209796,210253..210543,210781..211065,211149..211233))
location: region:209540-211233:-1
so has part: feature:211149-211233:-1:exon
so has part: feature:210781-211065:-1:exon
so has part: feature:210253-210543:-1:exon
so has part: feature:209710-209796:-1:exon
so has part: feature:209540-209613:-1:exon

XP_030820936.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:211149-211233:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:210781-211065:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:210253-210543:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:209710-209796:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:209540-209613:-1:exon

TMEM25
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 87175
gene: TMEM25
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: transmembrane protein 25 isoform X1
translation: MGCASGWPGAALAVLLLLLLSLLALCLAALEELDPTTERQPRTVCTLQEGESRIFTCWVPRPAPGATLAWYLNGQKQEVNLSTADTASILTLTGQRSDYQLNCSLTIPTSSESYNTSILLNVQYKPEILQKGAHYQQAEGAGLLLVLFVLVQANSPASITWMHQDGHVMANTSKFLLLGATTYPGLANHSLHIHLNCTAGNLSISAANSGGITTASLLPTGLLDARVELPVLGVAIGAALALSALLSLGSCAACLACRLPKLVRGLGQAGPSPSIQCSHCSSSEPPQPQGTRLPRQTQSLPPNLRLGDLAQEDGASPKDAGASARGEESALLGLENSLVLSKLGFIQLPVSGRIYKVPSMSSDEIWL
SIO_010081: TMEM25
subclass of: SO_0000673
so part of: TMEM25
location: complement(join(209540..209613,209710..209796,209898..210179,210253..210543,210781..211065,211149..211233))
location: region:209540-211233:-1
so has part: feature:211149-211233:-1:exon
so has part: feature:210781-211065:-1:exon
so has part: feature:210253-210543:-1:exon
so has part: feature:209898-210179:-1:exon
so has part: feature:209710-209796:-1:exon
so has part: feature:209540-209613:-1:exon

XP_030820932.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:211149-211233:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:210781-211065:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:210253-210543:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:209898-210179:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:209710-209796:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:209540-209613:-1:exon

TTC36
type: Gene
subclass of: SO_0000704
RO_0002162: 87175
gene: TTC36
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(211718..212852)
location: region:211718-212852:-1
so has part: feature:211718-212852:-1:exon
subclass of: SO_0000010

115913158
type: Gene
SIO_000068: ncbigene

position:211718:-1
position: 211718
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:212852:-1
position: 212852
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:211718-212852:-1:exon

TTC36
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 87175
gene: TTC36
product: tetratricopeptide repeat domain 36, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 7 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_030965079.1
SIO_010081: TTC36
subclass of: SO_0000673
so part of: TTC36
location: complement(join(211718..212211,212281..212469,212707..212852))
location: region:211718-212852:-1
so has part: feature:212707-212852:-1:exon
so has part: feature:212281-212469:-1:exon
so has part: feature:211718-212211:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:212707-212852:-1:exon

position:212707:-1
position: 212707
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:212281-212469:-1:exon

position:212281:-1
position: 212281
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:212469:-1
position: 212469
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:211718-212211:-1:exon

position:212211:-1
position: 212211
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

TTC36
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 87175
gene: TTC36
product: tetratricopeptide repeat domain 36, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_030965078.1
SIO_010081: TTC36
subclass of: SO_0000673
so part of: TTC36
location: complement(join(211718..212469,212707..212852))
location: region:211718-212852:-1
so has part: feature:212707-212852:-1:exon
so has part: feature:211718-212469:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:212707-212852:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:211718-212469:-1:exon

TTC36
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 87175
gene: TTC36
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: tetratricopeptide repeat protein 36 isoform X2
translation: MATANDRAVLQTIFNPSTPFGDIPGLDEEEEDVQDEVEAFPLELLDQVRELELQGVSAAESGDISTALERFSEAIRLLPERASGYNNRAQALRLRGDVAGALQDLDAAIRLSRGRGRAACQSFVQRGLIHRLQARDEDARRDFERVARLGSAFARQQLVLLNPYSALCNQMLCEMLGRLRNPDGTGSD
SIO_010081: TTC36
subclass of: SO_0000673
so part of: TTC36
location: complement(join(211943..212211,212281..212469,212707..212815))
location: region:211943-212815:-1
so has part: feature:212707-212815:-1:exon
so has part: feature:212281-212469:-1:exon
so has part: feature:211943-212211:-1:exon

XP_030820939.1
type: Protein
SIO_000068: ncbiprotein

position:211943:-1
position: 211943
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:212815:-1
position: 212815
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:212707-212815:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:212281-212469:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:211943-212211:-1:exon

TTC36
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 87175
gene: TTC36
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: tetratricopeptide repeat protein 36 isoform X1
translation: MATANDRAVLQTIFNPSTPFGDIPGLDEEEEDVQDEVEAFPLELLDQVRELELQGVSAAESGDISTALERFSEAIRLLPERASGYNNRAQALRLRGDVAGEQRSCGRSPGSPSPHQRLPSLPGALQDLDAAIRLSRGRGRAACQSFVQRGLIHRLQARDEDARRDFERVARLGSAFARQQLVLLNPYSALCNQMLCEMLGRLRNPDGTGSD
SIO_010081: TTC36
subclass of: SO_0000673
so part of: TTC36
location: complement(join(211943..212469,212707..212815))
location: region:211943-212815:-1
so has part: feature:212707-212815:-1:exon
so has part: feature:211943-212469:-1:exon

XP_030820938.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:212707-212815:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:211943-212469:-1:exon

KMT2A
type: Gene
subclass of: SO_0000704
RO_0002162: 87175
gene: KMT2A
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(213109..253377)
location: region:213109-253377:-1
so has part: feature:213109-253377:-1:exon
subclass of: SO_0000010

115912990
type: Gene
SIO_000068: ncbigene

position:213109:-1
position: 213109
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:253377:-1
position: 253377
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:213109-253377:-1:exon

KMT2A
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 87175
gene: KMT2A
product: lysine methyltransferase 2A, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 mRNAs, 24 ESTs, 7 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XM_030964807.1
SIO_010081: KMT2A
subclass of: SO_0000673
so part of: KMT2A
location: complement(join(213109..217312,217666..217795,218162..218245,218688..218795,219182..219356,219628..219702,220221..220391,220772..220836,221353..221433,221742..226038,226651..226836,227474..227634,227882..227960,228040..228157,228451..228609,229121..229258,229364..229470,229779..229972,230447..230520,230770..230880,231681..231854,232414..232598,232936..233049,233244..233364,234153..234248,234501..234647,235686..235799,236654..236782,237395..237468,238077..238448,238977..239041,240088..240322,240687..240864,242141..244806,245862..245931,252719..253377))
location: region:213109-253377:-1
so has part: feature:252719-253377:-1:exon
so has part: feature:245862-245931:-1:exon
so has part: feature:242141-244806:-1:exon
so has part: feature:240687-240864:-1:exon
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so has part: feature:234153-234248:-1:exon
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so has part: feature:232936-233049:-1:exon
so has part: feature:232414-232598:-1:exon
so has part: feature:231681-231854:-1:exon
so has part: feature:230770-230880:-1:exon
so has part: feature:230447-230520:-1:exon
so has part: feature:229779-229972:-1:exon
so has part: feature:229364-229470:-1:exon
so has part: feature:229121-229258:-1:exon
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so has part: feature:226651-226836:-1:exon
so has part: feature:221742-226038:-1:exon
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so has part: feature:218162-218245:-1:exon
so has part: feature:217666-217795:-1:exon
so has part: feature:213109-217312:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:252719-253377:-1:exon

position:252719:-1
position: 252719
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:245862-245931:-1:exon

position:245862:-1
position: 245862
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:245931:-1
position: 245931
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:242141-244806:-1:exon

position:242141:-1
position: 242141
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:244806:-1
position: 244806
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:240687-240864:-1:exon

position:240687:-1
position: 240687
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:240864:-1
position: 240864
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:240088-240322:-1:exon

position:240088:-1
position: 240088
reference: sequence
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position:240322:-1
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reference: sequence
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urn:…
SIO_000300: 6
SIO_000628: feature:238977-239041:-1:exon

position:238977:-1
position: 238977
reference: sequence
type: ReverseStrandPosition
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position:239041:-1
position: 239041
reference: sequence
type: ReverseStrandPosition
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urn:…
SIO_000300: 7
SIO_000628: feature:238077-238448:-1:exon

position:238077:-1
position: 238077
reference: sequence
type: ReverseStrandPosition
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position:238448:-1
position: 238448
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:237395-237468:-1:exon

position:237395:-1
position: 237395
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:237468:-1
position: 237468
reference: sequence
type: ReverseStrandPosition
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urn:…
SIO_000300: 9
SIO_000628: feature:236654-236782:-1:exon

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position: 236654
reference: sequence
type: ReverseStrandPosition
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position:236782:-1
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reference: sequence
type: ReverseStrandPosition
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urn:…
SIO_000300: 10
SIO_000628: feature:235686-235799:-1:exon

position:235686:-1
position: 235686
reference: sequence
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position:235799:-1
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reference: sequence
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urn:…
SIO_000300: 11
SIO_000628: feature:234501-234647:-1:exon

position:234501:-1
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reference: sequence
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position:234647:-1
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reference: sequence
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urn:…
SIO_000300: 12
SIO_000628: feature:234153-234248:-1:exon

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reference: sequence
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position:234248:-1
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reference: sequence
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urn:…
SIO_000300: 13
SIO_000628: feature:233244-233364:-1:exon

position:233244:-1
position: 233244
reference: sequence
type: ReverseStrandPosition
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position:233364:-1
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reference: sequence
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urn:…
SIO_000300: 14
SIO_000628: feature:232936-233049:-1:exon

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position: 232936
reference: sequence
type: ReverseStrandPosition
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position:233049:-1
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reference: sequence
type: ReverseStrandPosition
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urn:…
SIO_000300: 15
SIO_000628: feature:232414-232598:-1:exon

position:232414:-1
position: 232414
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:232598:-1
position: 232598
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:231681-231854:-1:exon

position:231681:-1
position: 231681
reference: sequence
type: ReverseStrandPosition
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position:231854:-1
position: 231854
reference: sequence
type: ReverseStrandPosition
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urn:…
SIO_000300: 17
SIO_000628: feature:230770-230880:-1:exon

position:230770:-1
position: 230770
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:230880:-1
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reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:230447-230520:-1:exon

position:230447:-1
position: 230447
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:230520:-1
position: 230520
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:229779-229972:-1:exon

position:229779:-1
position: 229779
reference: sequence
type: ReverseStrandPosition
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position:229972:-1
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reference: sequence
type: ReverseStrandPosition
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urn:…
SIO_000300: 20
SIO_000628: feature:229364-229470:-1:exon

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reference: sequence
type: ReverseStrandPosition
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reference: sequence
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urn:…
SIO_000300: 21
SIO_000628: feature:229121-229258:-1:exon

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position: 229121
reference: sequence
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position:229258:-1
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urn:…
SIO_000300: 22
SIO_000628: feature:228451-228609:-1:exon

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position: 228451
reference: sequence
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position:228609:-1
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reference: sequence
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urn:…
SIO_000300: 23
SIO_000628: feature:228040-228157:-1:exon

position:228040:-1
position: 228040
reference: sequence
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position:228157:-1
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reference: sequence
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urn:…
SIO_000300: 24
SIO_000628: feature:227882-227960:-1:exon

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reference: sequence
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position:227960:-1
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urn:…
SIO_000300: 25
SIO_000628: feature:227474-227634:-1:exon

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reference: sequence
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position:227634:-1
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reference: sequence
type: ReverseStrandPosition
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urn:…
SIO_000300: 26
SIO_000628: feature:226651-226836:-1:exon

position:226651:-1
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reference: sequence
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position:226836:-1
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reference: sequence
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urn:…
SIO_000300: 27
SIO_000628: feature:221742-226038:-1:exon

position:221742:-1
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reference: sequence
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reference: sequence
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urn:…
SIO_000300: 28
SIO_000628: feature:221353-221433:-1:exon

position:221353:-1
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reference: sequence
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reference: sequence
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urn:…
SIO_000300: 29
SIO_000628: feature:220772-220836:-1:exon

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reference: sequence
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position:220836:-1
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reference: sequence
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urn:…
SIO_000300: 30
SIO_000628: feature:220221-220391:-1:exon

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position: 220221
reference: sequence
type: ReverseStrandPosition
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position:220391:-1
position: 220391
reference: sequence
type: ReverseStrandPosition
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urn:…
SIO_000300: 31
SIO_000628: feature:219628-219702:-1:exon

position:219628:-1
position: 219628
reference: sequence
type: ReverseStrandPosition
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position:219702:-1
position: 219702
reference: sequence
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urn:…
SIO_000300: 32
SIO_000628: feature:219182-219356:-1:exon

position:219182:-1
position: 219182
reference: sequence
type: ReverseStrandPosition
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position:219356:-1
position: 219356
reference: sequence
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urn:…
SIO_000300: 33
SIO_000628: feature:218688-218795:-1:exon

position:218688:-1
position: 218688
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:218795:-1
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reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 34
SIO_000628: feature:218162-218245:-1:exon

position:218162:-1
position: 218162
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:218245:-1
position: 218245
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 35
SIO_000628: feature:217666-217795:-1:exon

position:217666:-1
position: 217666
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:217795:-1
position: 217795
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 36
SIO_000628: feature:213109-217312:-1:exon

position:217312:-1
position: 217312
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

KMT2A
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 87175
gene: KMT2A
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: histone-lysine N-methyltransferase 2A isoform X1
translation: MALRAMRGRGGPRLRYPGRGAALGLGPGAPHIAQRYPGLALIEHGLFMCRGGGMAEPHNLHGTRCYAAPPRAGEALCRARGAARPRSLARRLSVKMAHSGRWRFPARPGSGGWGRRGPGGSRLRVPAVHSLRPAEPAAAPATAGEGERGGPCSGGAAGSGGGGAAPGPGGPAAAAGPGFDAALQVSATIGINLRRFRAACGTEAGSGEDEQFLGFGSDEEVKVRSPTRSPTVKSSPRKPRGRPRSSSDRSSAVLSDSSSVCSPSSKSETTSMEKVKKKESKSGEKRRGRPPALTSVKFKLSEEKDTSDIPKGSKEEKESLKKIKRSPSTTFQQATKIKKLRTSKLSPLKSKFKPGAKLQIGRKSVQIVRRRGRPPSSERLKTSSTLVINSQLEKPQRIRKEKDGTPPLTKEEKAAVRQSPRRIKPVRIIPSTKRTDAAIAKQLLQRAKKGAQKKIEKEAAKLQGRMGRTQLKNIRQFIMPVVSAISSRIIKTPKRFIEDEDYDPPIKISRLESTPNSRFSTTSCGSSEKSSAASQHSSQMSSDSSRSSSPSVDTSTDSQASEEMQMLSEERSNTPEVHTPLPVSQSPENDNGDRRNRRFSITERSFGQRTAKKLSALPSMPQQQSSSSPPPPLLTPPPPLQPASSISDHTPWLMPPTIPLASPFLPASAAPMQEKRKSILREPTFRWTSLKHSRSEPQYFSSAKYAKEGLIRKPIFDNFRPPPLTPEDVGFASGFSTPGATAPTRLFSLHSGARFDMHKRSPLLRAPRFTPSEAHSRIFESVTLPSSVGRATTGTSATGTSSRRRKRKAFSPIRSEPRSPSHSMRTRSGRLSTSDLTTLTPQSSVSSSLTSISVSSLATSALNSTFTFPSHSLSQSGESAERSQRPRKQTNAPAEPFSSGSPAPLFPWFTSSPQTERGKNKDRAAEELSKDKDADKGLEKDKSREKDREREKENKRESKKEKRRKGSEVQSSTALFPVGKMPKEKVSEDAAASSSAKKTAGRKKSTAADPTAEVSTAALVDTTAVKTKTSKKGRGGLDKSDLDLSPTVPSLEKEKALRLSAPSSSTVKHSASSISSMLAQADKLPMTDKRVASLLKKAKAQLYKIEKSKSLKQADQPKAQGQESDSSETSVRGPRIKHVCRRAAVALGRKRAVFPDDMPTLSALPWEEREKILSSMGNDDKSSIAGSEEAEPVAPPIKPIKPVTRNKAQQEPPVKKGRRSRRCGQCSGCQVPEDCGVCTNCLDKPKFGGRNIKKQCCKMRKCQNLQWMPSKAYLQKQAKAAKKKEKKSKTNEKKESHSGKNQLDSGQKQTPQAVVPREDNSGKKSSEPARKPVEEKHEDGNSSVPVSEPKQVPVSGTRKTGKQMSQPVQLPPPQPPGSGPLKKEAPKLSTSEPKKKQTPQPEIGTEQSKQKKIAPRPTFPVKQKPKEKEKPPPLSKPESSTLNLLSTLTNGSSSKQKPPTDGVHRIRVDFKEDCEVENVWEMGGLGIVTSVPITPRVVCFLCASSGHVEFVYCQVCCEPFHKFCLEESERPQEDQLENWCCRRCKFCHVCGRQHQATKQLLECNKCRNSYHPECLGPNYPTKPTKKKKVWICTKCVRCKSCGSTTPGKGWDAQWSHDFSLCHDCAKLFAKGNFCPLCDKCYDDDDYESKMMQCGKCDRWVHSKCENLSDEMYEILSNLPESVAYTCINCTEQHPAEWRLALEKELQISLKQVLTALLNSRTTSHLLRYRQAAKPPDLNPETEESIPSRSSPEGPDPPVLTEVSKQEEQQPLDLEGVKRKMDQGSYISVLDFSDDIVKIIQAAINADGGQPEIKKANSMVKSFFIRQMERVFPWFSVKKSRFWEPNKVTSNSGMLPNAVLPPSLDHNYAQWQEREENNRTEQPPLMKKIIPAPKLRGPGEPDSPTPLHPPTPPISGSDRSREDSPELNPPPDVEDNRQCALCLKYGDDSANDAGRLLYIGQNEWTHVNCALWSAEVFEDDDGSLKNVHMAVIRGKQLRCEF…
SIO_010081: KMT2A
subclass of: SO_0000673
so part of: KMT2A
location: complement(join(217037..217312,217666..217795,218162..218245,218688..218795,219182..219356,219628..219702,220221..220391,220772..220836,221353..221433,221742..226038,226651..226836,227474..227634,227882..227960,228040..228157,228451..228609,229121..229258,229364..229470,229779..229972,230447..230520,230770..230880,231681..231854,232414..232598,232936..233049,233244..233364,234153..234248,234501..234647,235686..235799,236654..236782,237395..237468,238077..238448,238977..239041,240088..240322,240687..240864,242141..244806,245862..245931,252719..253342))
location: region:217037-253342:-1
so has part: feature:252719-253342:-1:exon
so has part: feature:245862-245931:-1:exon
so has part: feature:242141-244806:-1:exon
so has part: feature:240687-240864:-1:exon
so has part: feature:240088-240322:-1:exon
so has part: feature:238977-239041:-1:exon
so has part: feature:238077-238448:-1:exon
so has part: feature:237395-237468:-1:exon
so has part: feature:236654-236782:-1:exon
so has part: feature:235686-235799:-1:exon
so has part: feature:234501-234647:-1:exon
so has part: feature:234153-234248:-1:exon
so has part: feature:233244-233364:-1:exon
so has part: feature:232936-233049:-1:exon
so has part: feature:232414-232598:-1:exon
so has part: feature:231681-231854:-1:exon
so has part: feature:230770-230880:-1:exon
so has part: feature:230447-230520:-1:exon
so has part: feature:229779-229972:-1:exon
so has part: feature:229364-229470:-1:exon
so has part: feature:229121-229258:-1:exon
so has part: feature:228451-228609:-1:exon
so has part: feature:228040-228157:-1:exon
so has part: feature:227882-227960:-1:exon
so has part: feature:227474-227634:-1:exon
so has part: feature:226651-226836:-1:exon
so has part: feature:221742-226038:-1:exon
so has part: feature:221353-221433:-1:exon
so has part: feature:220772-220836:-1:exon
so has part: feature:220221-220391:-1:exon
so has part: feature:219628-219702:-1:exon
so has part: feature:219182-219356:-1:exon
so has part: feature:218688-218795:-1:exon
so has part: feature:218162-218245:-1:exon
so has part: feature:217666-217795:-1:exon
so has part: feature:217037-217312:-1:exon

XP_030820667.1
type: Protein
SIO_000068: ncbiprotein

position:217037:-1
position: 217037
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:253342:-1
position: 253342
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:252719-253342:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:245862-245931:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:242141-244806:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:240687-240864:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:240088-240322:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:238977-239041:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:238077-238448:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:237395-237468:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:236654-236782:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:235686-235799:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:234501-234647:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:234153-234248:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:233244-233364:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:232936-233049:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:232414-232598:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:231681-231854:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:230770-230880:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:230447-230520:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:229779-229972:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:229364-229470:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:229121-229258:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:228451-228609:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:228040-228157:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:227882-227960:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:227474-227634:-1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:226651-226836:-1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:221742-226038:-1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:221353-221433:-1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:220772-220836:-1:exon

urn:…
SIO_000300: 30
SIO_000628: feature:220221-220391:-1:exon

urn:…
SIO_000300: 31
SIO_000628: feature:219628-219702:-1:exon

urn:…
SIO_000300: 32
SIO_000628: feature:219182-219356:-1:exon

urn:…
SIO_000300: 33
SIO_000628: feature:218688-218795:-1:exon

urn:…
SIO_000300: 34
SIO_000628: feature:218162-218245:-1:exon

urn:…
SIO_000300: 35
SIO_000628: feature:217666-217795:-1:exon

urn:…
SIO_000300: 36
SIO_000628: feature:217037-217312:-1:exon

KMT2A
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 87175
gene: KMT2A
product: lysine methyltransferase 2A, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 mRNAs, 17 ESTs, 4 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_030964808.1
SIO_010081: KMT2A
subclass of: SO_0000673
so part of: KMT2A
location: complement(join(217037..217312,217666..217795,218162..218245,218688..218795,219182..219356,219628..219702,220221..220391,220772..220836,221353..221433,221742..226038,226651..226836,227474..227634,227882..227960,228040..228157,228451..228609,229121..229258,229364..229470,229779..229969,230447..230520,230770..230880,231681..231854,232414..232598,232936..233049,233244..233364,234153..234248,234501..234647,235686..235799,236654..236782,237395..237468,238077..238448,238977..239041,240088..240322,240687..240864,242141..244806,245862..245931,252719..252724))
location: region:217037-252724:-1
so has part: feature:252719-252724:-1:exon
so has part: feature:245862-245931:-1:exon
so has part: feature:242141-244806:-1:exon
so has part: feature:240687-240864:-1:exon
so has part: feature:240088-240322:-1:exon
so has part: feature:238977-239041:-1:exon
so has part: feature:238077-238448:-1:exon
so has part: feature:237395-237468:-1:exon
so has part: feature:236654-236782:-1:exon
so has part: feature:235686-235799:-1:exon
so has part: feature:234501-234647:-1:exon
so has part: feature:234153-234248:-1:exon
so has part: feature:233244-233364:-1:exon
so has part: feature:232936-233049:-1:exon
so has part: feature:232414-232598:-1:exon
so has part: feature:231681-231854:-1:exon
so has part: feature:230770-230880:-1:exon
so has part: feature:230447-230520:-1:exon
so has part: feature:229779-229969:-1:exon
so has part: feature:229364-229470:-1:exon
so has part: feature:229121-229258:-1:exon
so has part: feature:228451-228609:-1:exon
so has part: feature:228040-228157:-1:exon
so has part: feature:227882-227960:-1:exon
so has part: feature:227474-227634:-1:exon
so has part: feature:226651-226836:-1:exon
so has part: feature:221742-226038:-1:exon
so has part: feature:221353-221433:-1:exon
so has part: feature:220772-220836:-1:exon
so has part: feature:220221-220391:-1:exon
so has part: feature:219628-219702:-1:exon
so has part: feature:219182-219356:-1:exon
so has part: feature:218688-218795:-1:exon
so has part: feature:218162-218245:-1:exon
so has part: feature:217666-217795:-1:exon
so has part: feature:217037-217312:-1:exon

position:252724:-1
position: 252724
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:252719-252724:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:245862-245931:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:242141-244806:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:240687-240864:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:240088-240322:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:238977-239041:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:238077-238448:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:237395-237468:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:236654-236782:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:235686-235799:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:234501-234647:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:234153-234248:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:233244-233364:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:232936-233049:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:232414-232598:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:231681-231854:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:230770-230880:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:230447-230520:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:229779-229969:-1:exon

position:229969:-1
position: 229969
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:229364-229470:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:229121-229258:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:228451-228609:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:228040-228157:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:227882-227960:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:227474-227634:-1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:226651-226836:-1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:221742-226038:-1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:221353-221433:-1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:220772-220836:-1:exon

urn:…
SIO_000300: 30
SIO_000628: feature:220221-220391:-1:exon

urn:…
SIO_000300: 31
SIO_000628: feature:219628-219702:-1:exon

urn:…
SIO_000300: 32
SIO_000628: feature:219182-219356:-1:exon

urn:…
SIO_000300: 33
SIO_000628: feature:218688-218795:-1:exon

urn:…
SIO_000300: 34
SIO_000628: feature:218162-218245:-1:exon

urn:…
SIO_000300: 35
SIO_000628: feature:217666-217795:-1:exon

urn:…
SIO_000300: 36
SIO_000628: feature:217037-217312:-1:exon

KMT2A
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 87175
gene: KMT2A
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: histone-lysine N-methyltransferase 2A isoform X2
translation: MEKVKKKESKSGEKRRGRPPALTSVKFKLSEEKDTSDIPKGSKEEKESLKKIKRSPSTTFQQATKIKKLRTSKLSPLKSKFKPGAKLQIGRKSVQIVRRRGRPPSSERLKTSSTLVINSQLEKPQRIRKEKDGTPPLTKEEKAAVRQSPRRIKPVRIIPSTKRTDAAIAKQLLQRAKKGAQKKIEKEAAKLQGRMGRTQLKNIRQFIMPVVSAISSRIIKTPKRFIEDEDYDPPIKISRLESTPNSRFSTTSCGSSEKSSAASQHSSQMSSDSSRSSSPSVDTSTDSQASEEMQMLSEERSNTPEVHTPLPVSQSPENDNGDRRNRRFSITERSFGQRTAKKLSALPSMPQQQSSSSPPPPLLTPPPPLQPASSISDHTPWLMPPTIPLASPFLPASAAPMQEKRKSILREPTFRWTSLKHSRSEPQYFSSAKYAKEGLIRKPIFDNFRPPPLTPEDVGFASGFSTPGATAPTRLFSLHSGARFDMHKRSPLLRAPRFTPSEAHSRIFESVTLPSSVGRATTGTSATGTSSRRRKRKAFSPIRSEPRSPSHSMRTRSGRLSTSDLTTLTPQSSVSSSLTSISVSSLATSALNSTFTFPSHSLSQSGESAERSQRPRKQTNAPAEPFSSGSPAPLFPWFTSSPQTERGKNKDRAAEELSKDKDADKGLEKDKSREKDREREKENKRESKKEKRRKGSEVQSSTALFPVGKMPKEKVSEDAAASSSAKKTAGRKKSTAADPTAEVSTAALVDTTAVKTKTSKKGRGGLDKSDLDLSPTVPSLEKEKALRLSAPSSSTVKHSASSISSMLAQADKLPMTDKRVASLLKKAKAQLYKIEKSKSLKQADQPKAQGQESDSSETSVRGPRIKHVCRRAAVALGRKRAVFPDDMPTLSALPWEEREKILSSMGNDDKSSIAGSEEAEPVAPPIKPIKPVTRNKAQQEPPVKKGRRSRRCGQCSGCQVPEDCGVCTNCLDKPKFGGRNIKKQCCKMRKCQNLQWMPSKAYLQKQAKAAKKKEKKSKTNEKKESHSGKNQLDSGQKQTPQAVVPREDNSGKKSSEPARKPVEEKHEDGNSSVPVSEPKQVPVSGTRKTGKQMSQPVQLPPPQPPGSGPLKKEAPKLSTSEPKKKQTPQPEIGTEQSKQKKIAPRPTFPVKQKPKEKEKPPPLSKPESSTLNLLSTLTNGSSSKQKPPTDGVHRIRVDFKEDCEVENVWEMGGLGIVTSVPITPRVVCFLCASSGHVEFVYCQVCCEPFHKFCLEESERPQEDQLENWCCRRCKFCHVCGRQHQATKQLLECNKCRNSYHPECLGPNYPTKPTKKKKVWICTKCVRCKSCGSTTPGKGWDAQWSHDFSLCHDCAKLFAKGNFCPLCDKCYDDDDYESKMMQCGKCDRWVHSKCENLSDEMYEILSNLPESVAYTCINCTEQHPAEWRLALEKELQISLKQVLTALLNSRTTSHLLRYRQAAKPPDLNPETEESIPSRSSPEGPDPPVLTEVSKQEEQQPLDLEGVKRKMDQGSYISVLDFSDDIVKIIQAAINADGGQPEIKKANSMVKSFFIRQMERVFPWFSVKKSRFWEPNKVTSNGMLPNAVLPPSLDHNYAQWQEREENNRTEQPPLMKKIIPAPKLRGPGEPDSPTPLHPPTPPISGSDRSREDSPELNPPPDVEDNRQCALCLKYGDDSANDAGRLLYIGQNEWTHVNCALWSAEVFEDDDGSLKNVHMAVIRGKQLRCEFCQKSGATVGCCLTSCTSNYHFMCSRVKNCVFLDDKKVYCQRHRDLIKGEVVPENGFEVLRRVFVDFEGISLRRKFLSGLEPENIHMMIGSMTIDCLGILNDLSDCEDKLFPIGYQCSRVYWSTTDARKRCVYTCKIMECRPPVVEPDINSTVEHDDNRTIAHSPVPLTEILPKDTRNTPEIVNPPSPDRPLHSQTSSSCYYPVVSKGPRIRVPSYPSAQRSPGSRPLPSAGSPTPVTHEIVTVGDPLLSSGLKSIGSRRHSTSSLSQQQSKL…
SIO_010081: KMT2A
subclass of: SO_0000673
so part of: KMT2A
location: complement(join(217037..217312,217666..217795,218162..218245,218688..218795,219182..219356,219628..219702,220221..220391,220772..220836,221353..221433,221742..226038,226651..226836,227474..227634,227882..227960,228040..228157,228451..228609,229121..229258,229364..229470,229779..229969,230447..230520,230770..230880,231681..231854,232414..232598,232936..233049,233244..233364,234153..234248,234501..234647,235686..235799,236654..236782,237395..237468,238077..238448,238977..239041,240088..240322,240687..240864,242141..244687))
location: region:217037-244687:-1
so has part: feature:242141-244687:-1:exon
so has part: feature:240687-240864:-1:exon
so has part: feature:240088-240322:-1:exon
so has part: feature:238977-239041:-1:exon
so has part: feature:238077-238448:-1:exon
so has part: feature:237395-237468:-1:exon
so has part: feature:236654-236782:-1:exon
so has part: feature:235686-235799:-1:exon
so has part: feature:234501-234647:-1:exon
so has part: feature:234153-234248:-1:exon
so has part: feature:233244-233364:-1:exon
so has part: feature:232936-233049:-1:exon
so has part: feature:232414-232598:-1:exon
so has part: feature:231681-231854:-1:exon
so has part: feature:230770-230880:-1:exon
so has part: feature:230447-230520:-1:exon
so has part: feature:229779-229969:-1:exon
so has part: feature:229364-229470:-1:exon
so has part: feature:229121-229258:-1:exon
so has part: feature:228451-228609:-1:exon
so has part: feature:228040-228157:-1:exon
so has part: feature:227882-227960:-1:exon
so has part: feature:227474-227634:-1:exon
so has part: feature:226651-226836:-1:exon
so has part: feature:221742-226038:-1:exon
so has part: feature:221353-221433:-1:exon
so has part: feature:220772-220836:-1:exon
so has part: feature:220221-220391:-1:exon
so has part: feature:219628-219702:-1:exon
so has part: feature:219182-219356:-1:exon
so has part: feature:218688-218795:-1:exon
so has part: feature:218162-218245:-1:exon
so has part: feature:217666-217795:-1:exon
so has part: feature:217037-217312:-1:exon

XP_030820668.1
type: Protein
SIO_000068: ncbiprotein

position:244687:-1
position: 244687
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:242141-244687:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:240687-240864:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:240088-240322:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:238977-239041:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:238077-238448:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:237395-237468:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:236654-236782:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:235686-235799:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:234501-234647:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:234153-234248:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:233244-233364:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:232936-233049:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:232414-232598:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:231681-231854:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:230770-230880:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:230447-230520:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:229779-229969:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:229364-229470:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:229121-229258:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:228451-228609:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:228040-228157:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:227882-227960:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:227474-227634:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:226651-226836:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:221742-226038:-1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:221353-221433:-1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:220772-220836:-1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:220221-220391:-1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:219628-219702:-1:exon

urn:…
SIO_000300: 30
SIO_000628: feature:219182-219356:-1:exon

urn:…
SIO_000300: 31
SIO_000628: feature:218688-218795:-1:exon

urn:…
SIO_000300: 32
SIO_000628: feature:218162-218245:-1:exon

urn:…
SIO_000300: 33
SIO_000628: feature:217666-217795:-1:exon

urn:…
SIO_000300: 34
SIO_000628: feature:217037-217312:-1:exon

ATP5MG
type: Gene
subclass of: SO_0000704
RO_0002162: 87175
gene: ATP5MG
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(255798..257029)
location: region:255798-257029:-1
so has part: feature:255798-257029:-1:exon
subclass of: SO_0000010

115913070
type: Gene
SIO_000068: ncbigene

position:255798:-1
position: 255798
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:257029:-1
position: 257029
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:255798-257029:-1:exon

ATP5MG
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 87175
gene: ATP5MG
product: ATP synthase membrane subunit g
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 17 mRNAs, 2 ESTs, 8 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
transcript id: XM_030964938.1
SIO_010081: ATP5MG
subclass of: SO_0000673
so part of: ATP5MG
location: complement(join(255798..255970,256528..256688,256889..257029))
location: region:255798-257029:-1
so has part: feature:256889-257029:-1:exon
so has part: feature:256528-256688:-1:exon
so has part: feature:255798-255970:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:256889-257029:-1:exon

position:256889:-1
position: 256889
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:256528-256688:-1:exon

position:256528:-1
position: 256528
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:256688:-1
position: 256688
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:255798-255970:-1:exon

position:255970:-1
position: 255970
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

ATP5MG
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 87175
gene: ATP5MG
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: ATP synthase subunit g, mitochondrial
translation: MAKAAQGLVQRLVQRGPELIGAAVTYSKPRLATFWYYAKVELAPPTPAEIPRAIDSMKGLVRAFQSGRLAQLTVKDALRNGLVATEVLMWFYIGEIIGKRGIIGYNV
SIO_010081: ATP5MG
subclass of: SO_0000673
so part of: ATP5MG
location: complement(join(255872..255970,256528..256688,256889..256952))
location: region:255872-256952:-1
so has part: feature:256889-256952:-1:exon
so has part: feature:256528-256688:-1:exon
so has part: feature:255872-255970:-1:exon

XP_030820798.1
type: Protein
SIO_000068: ncbiprotein

position:255872:-1
position: 255872
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:256952:-1
position: 256952
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:256889-256952:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:256528-256688:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:255872-255970:-1:exon

UBE4A
type: Gene
subclass of: SO_0000704
RO_0002162: 87175
gene: UBE4A
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(257176..267065)
location: region:257176-267065:-1
so has part: feature:257176-267065:-1:exon
subclass of: SO_0000010

115913146
type: Gene
SIO_000068: ncbigene

position:257176:-1
position: 257176
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:267065:-1
position: 267065
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:257176-267065:-1:exon

UBE4A
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 87175
gene: UBE4A
product: ubiquitination factor E4A, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 11 ESTs, 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XM_030965049.1
SIO_010081: UBE4A
subclass of: SO_0000673
so part of: UBE4A
location: complement(join(257176..257796,257950..258107,258343..258490,258686..258866,259005..259179,259864..259977,260103..260203,260290..260477,260894..261026,261594..261901,262791..262917,263184..263517,264351..264542,264757..264959,265142..265301,265390..265542,266103..266215,266376..266552,266662..266826,266977..267065))
location: region:257176-267065:-1
so has part: feature:266977-267065:-1:exon
so has part: feature:266662-266826:-1:exon
so has part: feature:266376-266552:-1:exon
so has part: feature:266103-266215:-1:exon
so has part: feature:265390-265542:-1:exon
so has part: feature:265142-265301:-1:exon
so has part: feature:264757-264959:-1:exon
so has part: feature:264351-264542:-1:exon
so has part: feature:263184-263517:-1:exon
so has part: feature:262791-262917:-1:exon
so has part: feature:261594-261901:-1:exon
so has part: feature:260894-261026:-1:exon
so has part: feature:260290-260477:-1:exon
so has part: feature:260103-260203:-1:exon
so has part: feature:259864-259977:-1:exon
so has part: feature:259005-259179:-1:exon
so has part: feature:258686-258866:-1:exon
so has part: feature:258343-258490:-1:exon
so has part: feature:257950-258107:-1:exon
so has part: feature:257176-257796:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:266977-267065:-1:exon

position:266977:-1
position: 266977
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:266662-266826:-1:exon

position:266662:-1
position: 266662
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:266826:-1
position: 266826
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:266376-266552:-1:exon

position:266376:-1
position: 266376
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:266552:-1
position: 266552
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:266103-266215:-1:exon

position:266103:-1
position: 266103
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:266215:-1
position: 266215
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:265390-265542:-1:exon

position:265390:-1
position: 265390
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:265542:-1
position: 265542
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:265142-265301:-1:exon

position:265142:-1
position: 265142
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:265301:-1
position: 265301
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:264757-264959:-1:exon

position:264757:-1
position: 264757
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:264959:-1
position: 264959
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:264351-264542:-1:exon

position:264351:-1
position: 264351
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:264542:-1
position: 264542
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:263184-263517:-1:exon

position:263184:-1
position: 263184
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:263517:-1
position: 263517
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:262791-262917:-1:exon

position:262791:-1
position: 262791
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:262917:-1
position: 262917
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:261594-261901:-1:exon

position:261594:-1
position: 261594
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:261901:-1
position: 261901
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:260894-261026:-1:exon

position:260894:-1
position: 260894
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:261026:-1
position: 261026
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:260290-260477:-1:exon

position:260290:-1
position: 260290
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:260477:-1
position: 260477
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:260103-260203:-1:exon

position:260103:-1
position: 260103
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:260203:-1
position: 260203
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:259864-259977:-1:exon

position:259864:-1
position: 259864
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:259977:-1
position: 259977
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:259005-259179:-1:exon

position:259005:-1
position: 259005
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:259179:-1
position: 259179
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:258686-258866:-1:exon

position:258686:-1
position: 258686
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:258866:-1
position: 258866
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:258343-258490:-1:exon

position:258343:-1
position: 258343
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:258490:-1
position: 258490
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:257950-258107:-1:exon

position:257950:-1
position: 257950
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:258107:-1
position: 258107
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:257176-257796:-1:exon

position:257796:-1
position: 257796
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

UBE4A
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 87175
gene: UBE4A
product: ubiquitination factor E4A, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 11 ESTs, 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
transcript id: XM_030965050.1
SIO_010081: UBE4A
subclass of: SO_0000673
so part of: UBE4A
location: complement(join(257176..257796,257950..258107,258343..258490,258686..258866,259005..259179,259864..259977,260103..260203,260290..260477,260894..261026,261594..261901,262791..262917,263184..263517,264351..264542,264757..264959,265142..265301,265390..265542,266103..266215,266376..266552,266662..267025))
location: region:257176-267025:-1
so has part: feature:266662-267025:-1:exon
so has part: feature:266376-266552:-1:exon
so has part: feature:266103-266215:-1:exon
so has part: feature:265390-265542:-1:exon
so has part: feature:265142-265301:-1:exon
so has part: feature:264757-264959:-1:exon
so has part: feature:264351-264542:-1:exon
so has part: feature:263184-263517:-1:exon
so has part: feature:262791-262917:-1:exon
so has part: feature:261594-261901:-1:exon
so has part: feature:260894-261026:-1:exon
so has part: feature:260290-260477:-1:exon
so has part: feature:260103-260203:-1:exon
so has part: feature:259864-259977:-1:exon
so has part: feature:259005-259179:-1:exon
so has part: feature:258686-258866:-1:exon
so has part: feature:258343-258490:-1:exon
so has part: feature:257950-258107:-1:exon
so has part: feature:257176-257796:-1:exon

position:267025:-1
position: 267025
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:266662-267025:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:266376-266552:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:266103-266215:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:265390-265542:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:265142-265301:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:264757-264959:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:264351-264542:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:263184-263517:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:262791-262917:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:261594-261901:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:260894-261026:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:260290-260477:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:260103-260203:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:259864-259977:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:259005-259179:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:258686-258866:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:258343-258490:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:257950-258107:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:257176-257796:-1:exon

UBE4A
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 87175
gene: UBE4A
product: ubiquitination factor E4A, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 11 ESTs, 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_030965051.1
SIO_010081: UBE4A
subclass of: SO_0000673
so part of: UBE4A
location: complement(join(257176..257796,257950..258107,258343..258490,258686..258866,259005..259179,259864..259977,260103..260203,260290..260477,260894..261026,261594..261901,262791..262917,263184..263517,264351..264542,264757..264959,265142..265301,265390..265542,266103..266215,266376..266552,266662..266826,266950..267016))
location: region:257176-267016:-1
so has part: feature:266950-267016:-1:exon
so has part: feature:266662-266826:-1:exon
so has part: feature:266376-266552:-1:exon
so has part: feature:266103-266215:-1:exon
so has part: feature:265390-265542:-1:exon
so has part: feature:265142-265301:-1:exon
so has part: feature:264757-264959:-1:exon
so has part: feature:264351-264542:-1:exon
so has part: feature:263184-263517:-1:exon
so has part: feature:262791-262917:-1:exon
so has part: feature:261594-261901:-1:exon
so has part: feature:260894-261026:-1:exon
so has part: feature:260290-260477:-1:exon
so has part: feature:260103-260203:-1:exon
so has part: feature:259864-259977:-1:exon
so has part: feature:259005-259179:-1:exon
so has part: feature:258686-258866:-1:exon
so has part: feature:258343-258490:-1:exon
so has part: feature:257950-258107:-1:exon
so has part: feature:257176-257796:-1:exon

position:267016:-1
position: 267016
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:266950-267016:-1:exon

position:266950:-1
position: 266950
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:266662-266826:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:266376-266552:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:266103-266215:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:265390-265542:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:265142-265301:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:264757-264959:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:264351-264542:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:263184-263517:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:262791-262917:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:261594-261901:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:260894-261026:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:260290-260477:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:260103-260203:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:259864-259977:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:259005-259179:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:258686-258866:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:258343-258490:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:257950-258107:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:257176-257796:-1:exon

UBE4A
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 87175
gene: UBE4A
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: ubiquitin conjugation factor E4 A
translation: MTDQENNNSISSNPFAALFGSVAAAKHFAAIQKQQQLRQLTGEETSISQDDSDNSVSESLDDCDYSVAEISRSFRSQRELCEQLNINHMIQRIFLITLDNSDPSMKSGNGIPARCVYLEEMAADLDDQDWLDMDNVEQALFTRLLLPEPGSHLIHMTCASSQNLSADRDAGERQILRYLYACFRRAREEITKVPENLLPFAVRCRNLTVSNTRTVLLTPEIYVNQNVYEQLVDLLLETLRGAQFEDMTEFLEEVIEALTMDEEVRTFGEVMVPVFDILLGRIKDLDLCQILLYTYLDVLLYFTKQKDIAKVFAGYIQPKDPNNGQMYQKTLLGAILNISCLLKTPGVVENHGYFLNPSRSSPQEIKVQESNIHQFMAQFHEKIYQMLKNLLQLSPETKHRILSWLGNCLHANAGRTKIWANQMPEIFFQMYASDAFFLNLGAALLKLCQPFCKPRSPKLLTFNPTYCALKELNEEERRSKNVHMKGLEKETCLIPALTEQEPQFANSYNLVTENLVLTQYTLHLGFHRLHDQMVKINQSLHRLQVAWREAQQSSSPAADSLREQFERLMTIYLSTKTAMTEPQMLQNCLNLQVSMAVLLVQLAVGNQGSEPLELTFPLPQVEHSALAYVPEFFADNLGDFFIFLRRFADDILETSADSLEHILHFVTVFMGDVERMKNPHLRAKLAEVLEAVMPHLDQAQSPLVSSVFHRKRVFCSYQHAAHLAEALIKVFVDIEFTGDPHQFEQKFNYRRPMYPILRYMWDTDSYRDSIKALADYASENLEAMNPPLFLRFLNLLMNDAIFLLDEAIQYLSKIKVQQIEKDRGEWDSLSPEARREKESSLQMFGQLARFHNIMSNETIGTLAFLTSEIKSLFVHPFLAERIISMLNYFLQHLVGPKMGALKVKDFSEFDFKPQQLVSDICTIYLNLGDEENFCATVPKDGRSYSPTLFAQTVRVLKKINKPGNMIVSFSNLAERIKSLADRQQQEEETYADACDEFLDPIMSTLMSDPVILPSSRVTVDRSTIARHLLSDQTDPFNRSPLTMDQIRPNTELKEKIQRWLAERKKQKEEELEDTLN
SIO_010081: UBE4A
subclass of: SO_0000673
so part of: UBE4A
location: complement(join(257655..257796,257950..258107,258343..258490,258686..258866,259005..259179,259864..259977,260103..260203,260290..260477,260894..261026,261594..261901,262791..262917,263184..263517,264351..264542,264757..264959,265142..265301,265390..265542,266103..266215,266376..266552,266662..266785))
location: region:257655-266785:-1
so has part: feature:266662-266785:-1:exon
so has part: feature:266376-266552:-1:exon
so has part: feature:266103-266215:-1:exon
so has part: feature:265390-265542:-1:exon
so has part: feature:265142-265301:-1:exon
so has part: feature:264757-264959:-1:exon
so has part: feature:264351-264542:-1:exon
so has part: feature:263184-263517:-1:exon
so has part: feature:262791-262917:-1:exon
so has part: feature:261594-261901:-1:exon
so has part: feature:260894-261026:-1:exon
so has part: feature:260290-260477:-1:exon
so has part: feature:260103-260203:-1:exon
so has part: feature:259864-259977:-1:exon
so has part: feature:259005-259179:-1:exon
so has part: feature:258686-258866:-1:exon
so has part: feature:258343-258490:-1:exon
so has part: feature:257950-258107:-1:exon
so has part: feature:257655-257796:-1:exon

XP_030820909.1
type: Protein
SIO_000068: ncbiprotein

position:257655:-1
position: 257655
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:266785:-1
position: 266785
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:266662-266785:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:266376-266552:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:266103-266215:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:265390-265542:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:265142-265301:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:264757-264959:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:264351-264542:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:263184-263517:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:262791-262917:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:261594-261901:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:260894-261026:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:260290-260477:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:260103-260203:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:259864-259977:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:259005-259179:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:258686-258866:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:258343-258490:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:257950-258107:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:257655-257796:-1:exon

UBE4A
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 87175
gene: UBE4A
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: ubiquitin conjugation factor E4 A
translation: MTDQENNNSISSNPFAALFGSVAAAKHFAAIQKQQQLRQLTGEETSISQDDSDNSVSESLDDCDYSVAEISRSFRSQRELCEQLNINHMIQRIFLITLDNSDPSMKSGNGIPARCVYLEEMAADLDDQDWLDMDNVEQALFTRLLLPEPGSHLIHMTCASSQNLSADRDAGERQILRYLYACFRRAREEITKVPENLLPFAVRCRNLTVSNTRTVLLTPEIYVNQNVYEQLVDLLLETLRGAQFEDMTEFLEEVIEALTMDEEVRTFGEVMVPVFDILLGRIKDLDLCQILLYTYLDVLLYFTKQKDIAKVFAGYIQPKDPNNGQMYQKTLLGAILNISCLLKTPGVVENHGYFLNPSRSSPQEIKVQESNIHQFMAQFHEKIYQMLKNLLQLSPETKHRILSWLGNCLHANAGRTKIWANQMPEIFFQMYASDAFFLNLGAALLKLCQPFCKPRSPKLLTFNPTYCALKELNEEERRSKNVHMKGLEKETCLIPALTEQEPQFANSYNLVTENLVLTQYTLHLGFHRLHDQMVKINQSLHRLQVAWREAQQSSSPAADSLREQFERLMTIYLSTKTAMTEPQMLQNCLNLQVSMAVLLVQLAVGNQGSEPLELTFPLPQVEHSALAYVPEFFADNLGDFFIFLRRFADDILETSADSLEHILHFVTVFMGDVERMKNPHLRAKLAEVLEAVMPHLDQAQSPLVSSVFHRKRVFCSYQHAAHLAEALIKVFVDIEFTGDPHQFEQKFNYRRPMYPILRYMWDTDSYRDSIKALADYASENLEAMNPPLFLRFLNLLMNDAIFLLDEAIQYLSKIKVQQIEKDRGEWDSLSPEARREKESSLQMFGQLARFHNIMSNETIGTLAFLTSEIKSLFVHPFLAERIISMLNYFLQHLVGPKMGALKVKDFSEFDFKPQQLVSDICTIYLNLGDEENFCATVPKDGRSYSPTLFAQTVRVLKKINKPGNMIVSFSNLAERIKSLADRQQQEEETYADACDEFLDPIMSTLMSDPVILPSSRVTVDRSTIARHLLSDQTDPFNRSPLTMDQIRPNTELKEKIQRWLAERKKQKEEELEDTLN
SIO_010081: UBE4A
subclass of: SO_0000673
so part of: UBE4A
location: complement(join(257655..257796,257950..258107,258343..258490,258686..258866,259005..259179,259864..259977,260103..260203,260290..260477,260894..261026,261594..261901,262791..262917,263184..263517,264351..264542,264757..264959,265142..265301,265390..265542,266103..266215,266376..266552,266662..266785))
location: region:257655-266785:-1
so has part: feature:266662-266785:-1:exon
so has part: feature:266376-266552:-1:exon
so has part: feature:266103-266215:-1:exon
so has part: feature:265390-265542:-1:exon
so has part: feature:265142-265301:-1:exon
so has part: feature:264757-264959:-1:exon
so has part: feature:264351-264542:-1:exon
so has part: feature:263184-263517:-1:exon
so has part: feature:262791-262917:-1:exon
so has part: feature:261594-261901:-1:exon
so has part: feature:260894-261026:-1:exon
so has part: feature:260290-260477:-1:exon
so has part: feature:260103-260203:-1:exon
so has part: feature:259864-259977:-1:exon
so has part: feature:259005-259179:-1:exon
so has part: feature:258686-258866:-1:exon
so has part: feature:258343-258490:-1:exon
so has part: feature:257950-258107:-1:exon
so has part: feature:257655-257796:-1:exon

XP_030820910.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:266662-266785:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:266376-266552:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:266103-266215:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:265390-265542:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:265142-265301:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:264757-264959:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:264351-264542:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:263184-263517:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:262791-262917:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:261594-261901:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:260894-261026:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:260290-260477:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:260103-260203:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:259864-259977:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:259005-259179:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:258686-258866:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:258343-258490:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:257950-258107:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:257655-257796:-1:exon

UBE4A
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 87175
gene: UBE4A
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: ubiquitin conjugation factor E4 A
translation: MTDQENNNSISSNPFAALFGSVAAAKHFAAIQKQQQLRQLTGEETSISQDDSDNSVSESLDDCDYSVAEISRSFRSQRELCEQLNINHMIQRIFLITLDNSDPSMKSGNGIPARCVYLEEMAADLDDQDWLDMDNVEQALFTRLLLPEPGSHLIHMTCASSQNLSADRDAGERQILRYLYACFRRAREEITKVPENLLPFAVRCRNLTVSNTRTVLLTPEIYVNQNVYEQLVDLLLETLRGAQFEDMTEFLEEVIEALTMDEEVRTFGEVMVPVFDILLGRIKDLDLCQILLYTYLDVLLYFTKQKDIAKVFAGYIQPKDPNNGQMYQKTLLGAILNISCLLKTPGVVENHGYFLNPSRSSPQEIKVQESNIHQFMAQFHEKIYQMLKNLLQLSPETKHRILSWLGNCLHANAGRTKIWANQMPEIFFQMYASDAFFLNLGAALLKLCQPFCKPRSPKLLTFNPTYCALKELNEEERRSKNVHMKGLEKETCLIPALTEQEPQFANSYNLVTENLVLTQYTLHLGFHRLHDQMVKINQSLHRLQVAWREAQQSSSPAADSLREQFERLMTIYLSTKTAMTEPQMLQNCLNLQVSMAVLLVQLAVGNQGSEPLELTFPLPQVEHSALAYVPEFFADNLGDFFIFLRRFADDILETSADSLEHILHFVTVFMGDVERMKNPHLRAKLAEVLEAVMPHLDQAQSPLVSSVFHRKRVFCSYQHAAHLAEALIKVFVDIEFTGDPHQFEQKFNYRRPMYPILRYMWDTDSYRDSIKALADYASENLEAMNPPLFLRFLNLLMNDAIFLLDEAIQYLSKIKVQQIEKDRGEWDSLSPEARREKESSLQMFGQLARFHNIMSNETIGTLAFLTSEIKSLFVHPFLAERIISMLNYFLQHLVGPKMGALKVKDFSEFDFKPQQLVSDICTIYLNLGDEENFCATVPKDGRSYSPTLFAQTVRVLKKINKPGNMIVSFSNLAERIKSLADRQQQEEETYADACDEFLDPIMSTLMSDPVILPSSRVTVDRSTIARHLLSDQTDPFNRSPLTMDQIRPNTELKEKIQRWLAERKKQKEEELEDTLN
SIO_010081: UBE4A
subclass of: SO_0000673
so part of: UBE4A
location: complement(join(257655..257796,257950..258107,258343..258490,258686..258866,259005..259179,259864..259977,260103..260203,260290..260477,260894..261026,261594..261901,262791..262917,263184..263517,264351..264542,264757..264959,265142..265301,265390..265542,266103..266215,266376..266552,266662..266785))
location: region:257655-266785:-1
so has part: feature:266662-266785:-1:exon
so has part: feature:266376-266552:-1:exon
so has part: feature:266103-266215:-1:exon
so has part: feature:265390-265542:-1:exon
so has part: feature:265142-265301:-1:exon
so has part: feature:264757-264959:-1:exon
so has part: feature:264351-264542:-1:exon
so has part: feature:263184-263517:-1:exon
so has part: feature:262791-262917:-1:exon
so has part: feature:261594-261901:-1:exon
so has part: feature:260894-261026:-1:exon
so has part: feature:260290-260477:-1:exon
so has part: feature:260103-260203:-1:exon
so has part: feature:259864-259977:-1:exon
so has part: feature:259005-259179:-1:exon
so has part: feature:258686-258866:-1:exon
so has part: feature:258343-258490:-1:exon
so has part: feature:257950-258107:-1:exon
so has part: feature:257655-257796:-1:exon

XP_030820911.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:266662-266785:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:266376-266552:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:266103-266215:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:265390-265542:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:265142-265301:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:264757-264959:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:264351-264542:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:263184-263517:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:262791-262917:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:261594-261901:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:260894-261026:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:260290-260477:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:260103-260203:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:259864-259977:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:259005-259179:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:258686-258866:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:258343-258490:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:257950-258107:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:257655-257796:-1:exon

LOC115912969
type: Gene
subclass of: SO_0000704
RO_0002162: 87175
gene: LOC115912969
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(268694..270920)
location: region:268694-270920:-1
so has part: feature:268694-270920:-1:exon
subclass of: SO_0000010

115912969
type: Gene
SIO_000068: ncbigene

position:268694:-1
position: 268694
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:270920:-1
position: 270920
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:268694-270920:-1:exon

LOC115912969
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 87175
gene: LOC115912969
product: G protein-activated inward rectifier potassium channel 4-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 43 Proteins, and 84% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_030964777.1
SIO_010081: LOC115912969
subclass of: SO_0000673
so part of: LOC115912969
location: complement(join(268694..269164,269449..270634,270744..270920))
location: region:268694-270920:-1
so has part: feature:270744-270920:-1:exon
so has part: feature:269449-270634:-1:exon
so has part: feature:268694-269164:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:270744-270920:-1:exon

position:270744:-1
position: 270744
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:269449-270634:-1:exon

position:269449:-1
position: 269449
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:270634:-1
position: 270634
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:268694-269164:-1:exon

position:269164:-1
position: 269164
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC115912969
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 87175
gene: LOC115912969
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: G protein-activated inward rectifier potassium channel 4-like
translation: MVLPCARNSGGAGGWLPPEEPRGRSNSIPPAQTPTAKHMLAYLPRPPTDTSRYGTFPQKPDVPAASGAPAEDGGQKAAAAAAKRGAAMPNYPSAPRHGGFVAGEPSLPPSRGSLSAQQHRGRPSWCPPPAPQEAAARFYPLHALSVANIPNSSRGKTSARSSTAPTPEGLQGRRCKLLEEDSPMAQAGRRQRQRYVTKVGKCQVNLGNIQDKKRFLSDIFTTIVDLKYRWFLFVFMMCYVVTWVVFGFIYFLDAWMRGDVWHQGDPEWQACIENVDGFVSALLLSVESQRTIGYGTRMVTANCAEGVILLIAQSIVGSMIDAMMVGCMFVKISRPKKRAQTLIFSKNCVISLRDEKLCLMFRVGDLRESHMVDAKIRAKLIKSRQTAEGEFIPLEQSELNLGYDTGEDRLFLVEPQIICHVINRHSPFWDMSAESLRREQFEIIIILEGIVEATGMTCQARTSYTEDEILWGYRFEPCMSLEKGAFQVDYSRFEMTFEVQTPAASAKELQELRELEQQEHSTLSLYWDQLVQPCALPGPGQDSLLGMAVPATAPGQDSLLGMAVPASTAQGGRDEPAQRDCPA
SIO_010081: LOC115912969
subclass of: SO_0000673
so part of: LOC115912969
location: complement(join(268776..269164,269449..270634,270744..270920))
location: region:268776-270920:-1
so has part: feature:270744-270920:-1:exon
so has part: feature:269449-270634:-1:exon
so has part: feature:268776-269164:-1:exon

XP_030820637.1
type: Protein
SIO_000068: ncbiprotein

position:268776:-1
position: 268776
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:270744-270920:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:269449-270634:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:268776-269164:-1:exon

LOC115913108
type: Gene
subclass of: SO_0000704
RO_0002162: 87175
gene: LOC115913108
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 273152..274221
location: region:273152-274221:1
so has part: feature:273152-274221:1:exon
subclass of: SO_0000010

115913108
type: Gene
SIO_000068: ncbigene

position:273152:1
position: 273152
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:274221:1
position: 274221
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:273152-274221:1:exon

LOC115913108
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 87175
gene: LOC115913108
product: putative claudin-24
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 ESTs, 19 Proteins
transcript id: XM_030964996.1
SIO_010081: LOC115913108
subclass of: SO_0000673
so part of: LOC115913108
location: 273152..274221
location: region:273152-274221:1
so has part: feature:273152-274221:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:273152-274221:1:exon

LOC115913108
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 87175
gene: LOC115913108
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: putative claudin-24
translation: MAGGWGAKAQGGGMLLALLGWISSCVTTFVPLWKNLNLDLNELEVWNMGLWQVCITQEEGVVECQAHGSFLALPPELRISRLLMCLSNGLGLLGCLLAALGLEGWRTCEDKPGRKRQLLLGGGATLGLAGITTLVPVSWVAYNTVLDFWDETVPDIVPRWEFGEATFLGWFAGAFLAAGGLLLACSARASSTDTPLAPACHQGPAAPGLPRGHHLHPKTADLVI
SIO_010081: LOC115913108
subclass of: SO_0000673
so part of: LOC115913108
location: 273152..273826
location: region:273152-273826:1
so has part: feature:273152-273826:1:exon

XP_030820856.1
type: Protein
SIO_000068: ncbiprotein

position:273826:1
position: 273826
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:273152-273826:1:exon

USP28
type: Gene
subclass of: SO_0000704
RO_0002162: 87175
gene: USP28
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(275771..297532)
location: region:275771-297532:-1
so has part: feature:275771-297532:-1:exon
subclass of: SO_0000010

115913101
type: Gene
SIO_000068: ncbigene

position:275771:-1
position: 275771
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:297532:-1
position: 297532
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:275771-297532:-1:exon

USP28
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 87175
gene: USP28
product: ubiquitin specific peptidase 28, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 ESTs, 11 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_030964981.1
SIO_010081: USP28
subclass of: SO_0000673
so part of: USP28
location: complement(join(275771..276979,278309..278507,278996..279119,280096..280175,280501..280579,280673..280851,281692..281787,282674..282859,283050..283189,283698..283901,285282..285510,285824..285894,286134..286348,287045..287224,287590..287685,287837..287964,289974..290122,290239..290315,290801..290874,291296..291433,291869..291955,292891..293053,293222..293333,293806..293938,294182..294259,297481..297532))
location: region:275771-297532:-1
so has part: feature:297481-297532:-1:exon
so has part: feature:294182-294259:-1:exon
so has part: feature:293806-293938:-1:exon
so has part: feature:293222-293333:-1:exon
so has part: feature:292891-293053:-1:exon
so has part: feature:291869-291955:-1:exon
so has part: feature:291296-291433:-1:exon
so has part: feature:290801-290874:-1:exon
so has part: feature:290239-290315:-1:exon
so has part: feature:289974-290122:-1:exon
so has part: feature:287837-287964:-1:exon
so has part: feature:287590-287685:-1:exon
so has part: feature:287045-287224:-1:exon
so has part: feature:286134-286348:-1:exon
so has part: feature:285824-285894:-1:exon
so has part: feature:285282-285510:-1:exon
so has part: feature:283698-283901:-1:exon
so has part: feature:283050-283189:-1:exon
so has part: feature:282674-282859:-1:exon
so has part: feature:281692-281787:-1:exon
so has part: feature:280673-280851:-1:exon
so has part: feature:280501-280579:-1:exon
so has part: feature:280096-280175:-1:exon
so has part: feature:278996-279119:-1:exon
so has part: feature:278309-278507:-1:exon
so has part: feature:275771-276979:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:297481-297532:-1:exon

position:297481:-1
position: 297481
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:294182-294259:-1:exon

position:294182:-1
position: 294182
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:294259:-1
position: 294259
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:293806-293938:-1:exon

position:293806:-1
position: 293806
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:293938:-1
position: 293938
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:293222-293333:-1:exon

position:293222:-1
position: 293222
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:293333:-1
position: 293333
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:292891-293053:-1:exon

position:292891:-1
position: 292891
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:293053:-1
position: 293053
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:291869-291955:-1:exon

position:291869:-1
position: 291869
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:291955:-1
position: 291955
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:291296-291433:-1:exon

position:291296:-1
position: 291296
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:291433:-1
position: 291433
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:290801-290874:-1:exon

position:290801:-1
position: 290801
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:290874:-1
position: 290874
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:290239-290315:-1:exon

position:290239:-1
position: 290239
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:290315:-1
position: 290315
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:289974-290122:-1:exon

position:289974:-1
position: 289974
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:290122:-1
position: 290122
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:287837-287964:-1:exon

position:287837:-1
position: 287837
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:287964:-1
position: 287964
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:287590-287685:-1:exon

position:287590:-1
position: 287590
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:287685:-1
position: 287685
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:287045-287224:-1:exon

position:287045:-1
position: 287045
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:287224:-1
position: 287224
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:286134-286348:-1:exon

position:286134:-1
position: 286134
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:286348:-1
position: 286348
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:285824-285894:-1:exon

position:285824:-1
position: 285824
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:285894:-1
position: 285894
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:285282-285510:-1:exon

position:285282:-1
position: 285282
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:285510:-1
position: 285510
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:283698-283901:-1:exon

position:283698:-1
position: 283698
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:283901:-1
position: 283901
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:283050-283189:-1:exon

position:283050:-1
position: 283050
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:283189:-1
position: 283189
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:282674-282859:-1:exon

position:282674:-1
position: 282674
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:282859:-1
position: 282859
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:281692-281787:-1:exon

position:281692:-1
position: 281692
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:281787:-1
position: 281787
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:280673-280851:-1:exon

position:280673:-1
position: 280673
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:280851:-1
position: 280851
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 22
SIO_000628: feature:280501-280579:-1:exon

position:280501:-1
position: 280501
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:280579:-1
position: 280579
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 23
SIO_000628: feature:280096-280175:-1:exon

position:280096:-1
position: 280096
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:280175:-1
position: 280175
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 24
SIO_000628: feature:278996-279119:-1:exon

position:278996:-1
position: 278996
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:279119:-1
position: 279119
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 25
SIO_000628: feature:278309-278507:-1:exon

position:278309:-1
position: 278309
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:278507:-1
position: 278507
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 26
SIO_000628: feature:275771-276979:-1:exon

position:276979:-1
position: 276979
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

USP28
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 87175
gene: USP28
product: ubiquitin specific peptidase 28, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, 7 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XM_030964982.1
SIO_010081: USP28
subclass of: SO_0000673
so part of: USP28
location: complement(join(276804..276979,278309..278507,278996..279119,280096..280175,280501..280579,280673..280851,283050..283189,283698..283901,285282..285510,285824..285894,286134..286348,287045..287224,287590..287685,287837..287964,289974..290122,290239..290315,290801..290874,291296..291433,291869..291955,292891..293053,293222..293333,293806..293938,294182..294259,297481..297532))
location: region:276804-297532:-1
so has part: feature:297481-297532:-1:exon
so has part: feature:294182-294259:-1:exon
so has part: feature:293806-293938:-1:exon
so has part: feature:293222-293333:-1:exon
so has part: feature:292891-293053:-1:exon
so has part: feature:291869-291955:-1:exon
so has part: feature:291296-291433:-1:exon
so has part: feature:290801-290874:-1:exon
so has part: feature:290239-290315:-1:exon
so has part: feature:289974-290122:-1:exon
so has part: feature:287837-287964:-1:exon
so has part: feature:287590-287685:-1:exon
so has part: feature:287045-287224:-1:exon
so has part: feature:286134-286348:-1:exon
so has part: feature:285824-285894:-1:exon
so has part: feature:285282-285510:-1:exon
so has part: feature:283698-283901:-1:exon
so has part: feature:283050-283189:-1:exon
so has part: feature:280673-280851:-1:exon
so has part: feature:280501-280579:-1:exon
so has part: feature:280096-280175:-1:exon
so has part: feature:278996-279119:-1:exon
so has part: feature:278309-278507:-1:exon
so has part: feature:276804-276979:-1:exon

position:276804:-1
position: 276804
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:297481-297532:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:294182-294259:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:293806-293938:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:293222-293333:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:292891-293053:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:291869-291955:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:291296-291433:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:290801-290874:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:290239-290315:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:289974-290122:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:287837-287964:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:287590-287685:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:287045-287224:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:286134-286348:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:285824-285894:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:285282-285510:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:283698-283901:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:283050-283189:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:280673-280851:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:280501-280579:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:280096-280175:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:278996-279119:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:278309-278507:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:276804-276979:-1:exon

USP28
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 87175
gene: USP28
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: ubiquitin carboxyl-terminal hydrolase 28 isoform X2
translation: MTAELRARGGGGEDCQVLLNQMKEITGIQDSAFLLAALKAADGDLMEAVTFLTEDPAPEPVQNPAAAEPSAWEGSVVGKQLPQDVGAAPAPHNQDSLRTANTVRPLESPKAPAAERDAAERPQDTHSAENKNRSKRKRCEVWGENPKQNDWRRAGDWPVGMKNIGNTCWFSAVIQSLFQLPDFRRLVLGYSLPQNVLESCRSHTGKRNIAFMQELQCLFALMLGTWRKFVDPSAALELLRDVFRSAEQPQQDVSEFTHKLLDWLEDAFQLTVNVTSFGDKSENPMVQLFYGTFLTEGVHEGNTFSKIETFGQYPLQVNGYRNLNECLEGAMVEGEMDEATASQSVKYGQERWFTKLPPVLTFELSRFEFNQSLGQPEKIHTKLEFPQTIYMDRYLYCNKDLIQMKREEMKRLKEKMVTLQQKLERYMEYGSGPARFPLPDMLQYVLEFIATKPAGAVSSAQSSQTTPLHSQAKPNVLDVLSHPNSIQEKTDARTEDEAFFVANSSPQQSSSMDLQPPVSPAELSERPAPHVVSKEELDLVQTCLQRWRNEIEQDVQDLKESIARINLSIEQMYCDPLLQQVPYRLHAVLVHEGQANAGHYWAFIYDQPRKRWLKYNDISVTESSWEELERESFGGLRNASAYCLMYISDQVSPVGADEDEGPEARQLQKEVEALSPELRHYIQEDNWRLEQEAEEWDEEQSCKIPQMEPSPTSELQDLSSESGPEQSSVCEPSVHSLSSEHARIAKEQTAKAIANTADAYEKNGVEAALCEAFHEEYSRLYLLSKETPTPQNDARLQHVLIYFLQNNAPQQVVERTLLEQFADKNLSYDERSISIMKVARAKLSEIGPDDVDMEEYKRWHEDYSLFRKVSIYLLTGLELYQNRKYQESLTYLVYAYQSNTKLLLKGTNRGVSESLIALYRRKCLLKLNEVAASLFVSCEEAHVSEGVSILNELIIPCMHLMNNFEISKEDLDAIEVMRNRWCSYLGREDMDAKLQMKLGELLPRLLDGSTEVIVLKEPPKIRPNSPYDLCSRFAAVMESIHGASAVAVQ
SIO_010081: USP28
subclass of: SO_0000673
so part of: USP28
location: complement(join(276804..276979,278309..278507,278996..279119,280096..280175,280501..280579,280673..280851,283050..283189,283698..283901,285282..285510,285824..285894,286134..286348,287045..287224,287590..287685,287837..287964,289974..290122,290239..290315,290801..290874,291296..291433,291869..291955,292891..293053,293222..293333,293806..293938,294182..294259,297481..297519))
location: region:276804-297519:-1
so has part: feature:297481-297519:-1:exon
so has part: feature:294182-294259:-1:exon
so has part: feature:293806-293938:-1:exon
so has part: feature:293222-293333:-1:exon
so has part: feature:292891-293053:-1:exon
so has part: feature:291869-291955:-1:exon
so has part: feature:291296-291433:-1:exon
so has part: feature:290801-290874:-1:exon
so has part: feature:290239-290315:-1:exon
so has part: feature:289974-290122:-1:exon
so has part: feature:287837-287964:-1:exon
so has part: feature:287590-287685:-1:exon
so has part: feature:287045-287224:-1:exon
so has part: feature:286134-286348:-1:exon
so has part: feature:285824-285894:-1:exon
so has part: feature:285282-285510:-1:exon
so has part: feature:283698-283901:-1:exon
so has part: feature:283050-283189:-1:exon
so has part: feature:280673-280851:-1:exon
so has part: feature:280501-280579:-1:exon
so has part: feature:280096-280175:-1:exon
so has part: feature:278996-279119:-1:exon
so has part: feature:278309-278507:-1:exon
so has part: feature:276804-276979:-1:exon

XP_030820842.1
type: Protein
SIO_000068: ncbiprotein

position:297519:-1
position: 297519
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:297481-297519:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:294182-294259:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:293806-293938:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:293222-293333:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:292891-293053:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:291869-291955:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:291296-291433:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:290801-290874:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:290239-290315:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:289974-290122:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:287837-287964:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:287590-287685:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:287045-287224:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:286134-286348:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:285824-285894:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:285282-285510:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:283698-283901:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:283050-283189:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:280673-280851:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:280501-280579:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:280096-280175:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:278996-279119:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:278309-278507:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:276804-276979:-1:exon

USP28
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 87175
gene: USP28
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: ubiquitin carboxyl-terminal hydrolase 28 isoform X1
translation: MTAELRARGGGGEDCQVLLNQMKEITGIQDSAFLLAALKAADGDLMEAVTFLTEDPAPEPVQNPAAAEPSAWEGSVVGKQLPQDVGAAPAPHNQDSLRTANTVRPLESPKAPAAERDAAERPQDTHSAENKNRSKRKRCEVWGENPKQNDWRRAGDWPVGMKNIGNTCWFSAVIQSLFQLPDFRRLVLGYSLPQNVLESCRSHTGKRNIAFMQELQCLFALMLGTWRKFVDPSAALELLRDVFRSAEQPQQDVSEFTHKLLDWLEDAFQLTVNVTSFGDKSENPMVQLFYGTFLTEGVHEGNTFSKIETFGQYPLQVNGYRNLNECLEGAMVEGEMDEATASQSVKYGQERWFTKLPPVLTFELSRFEFNQSLGQPEKIHTKLEFPQTIYMDRYLYCNKDLIQMKREEMKRLKEKMVTLQQKLERYMEYGSGPARFPLPDMLQYVLEFIATKPAGAVSSAQSSQTTPLHSQAKPNVLDVLSHPNSIQEKTDARTEDEAFFVANSSPQQSSSMDLQPPVSPAELSERPAPHVVSKEELDLVQTCLQRWRNEIEQDVQDLKESIARINLSIEQMYCDPLLQQVPYRLHAVLVHEGQANAGHYWAFIYDQPRKRWLKYNDISVTESSWEELERESFGGLRNASAYCLMYISDQVSPVGADEDEGPEARQLQKEVEALSPELRHYIQEDNWRLEQEAEEWDEEQSCKIPQMEPSPTSELQDLSSESGPEQSSVCEPSVHSLSSEHARIAKEQTAKAIANTADAYEKNGVEAALCEHKEVEPLKAHPEETSPTVQTEQPQDTQEAEAAAQTSSQVSEVEIPSVGKIPVRSDADGYNEEVMLSPAMQGVILAIAKARQTFDRDGSEAGLVKAFHEEYSRLYLLSKETPTPQNDARLQHVLIYFLQNNAPQQVVERTLLEQFADKNLSYDERSISIMKVARAKLSEIGPDDVDMEEYKRWHEDYSLFRKVSIYLLTGLELYQNRKYQESLTYLVYAYQSNTKLLLKGTNRGVSESLIALYRRKCLLKLNEVAASLFVSCEEAHVSEGVSILNELIIPCMHLMNNFEISKEDLDAIEVMRNRWCSYLGREDMDAKLQMKLGELLPRLLDGSTEVIVLKEPPKIRPNSPYDLCSRFAAVMESIHGASAVAVQ
SIO_010081: USP28
subclass of: SO_0000673
so part of: USP28
location: complement(join(276804..276979,278309..278507,278996..279119,280096..280175,280501..280579,280673..280851,281692..281787,282674..282859,283050..283189,283698..283901,285282..285510,285824..285894,286134..286348,287045..287224,287590..287685,287837..287964,289974..290122,290239..290315,290801..290874,291296..291433,291869..291955,292891..293053,293222..293333,293806..293938,294182..294259,297481..297519))
location: region:276804-297519:-1
so has part: feature:297481-297519:-1:exon
so has part: feature:294182-294259:-1:exon
so has part: feature:293806-293938:-1:exon
so has part: feature:293222-293333:-1:exon
so has part: feature:292891-293053:-1:exon
so has part: feature:291869-291955:-1:exon
so has part: feature:291296-291433:-1:exon
so has part: feature:290801-290874:-1:exon
so has part: feature:290239-290315:-1:exon
so has part: feature:289974-290122:-1:exon
so has part: feature:287837-287964:-1:exon
so has part: feature:287590-287685:-1:exon
so has part: feature:287045-287224:-1:exon
so has part: feature:286134-286348:-1:exon
so has part: feature:285824-285894:-1:exon
so has part: feature:285282-285510:-1:exon
so has part: feature:283698-283901:-1:exon
so has part: feature:283050-283189:-1:exon
so has part: feature:282674-282859:-1:exon
so has part: feature:281692-281787:-1:exon
so has part: feature:280673-280851:-1:exon
so has part: feature:280501-280579:-1:exon
so has part: feature:280096-280175:-1:exon
so has part: feature:278996-279119:-1:exon
so has part: feature:278309-278507:-1:exon
so has part: feature:276804-276979:-1:exon

XP_030820841.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:297481-297519:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:294182-294259:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:293806-293938:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:293222-293333:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:292891-293053:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:291869-291955:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:291296-291433:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:290801-290874:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:290239-290315:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:289974-290122:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:287837-287964:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:287590-287685:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:287045-287224:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:286134-286348:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:285824-285894:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:285282-285510:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:283698-283901:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:283050-283189:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:282674-282859:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:281692-281787:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:280673-280851:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:280501-280579:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:280096-280175:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:278996-279119:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:278309-278507:-1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:276804-276979:-1:exon

LOC115913102
type: Gene
subclass of: SO_0000704
RO_0002162: 87175
gene: LOC115913102
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 302632..307913
location: region:302632-307913:1
so has part: feature:302632-307913:1:exon
subclass of: SO_0000010

115913102
type: Gene
SIO_000068: ncbigene

position:302632:1
position: 302632
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:307913:1
position: 307913
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:302632-307913:1:exon

LOC115913102
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 87175
gene: LOC115913102
product: 5-hydroxytryptamine receptor 3A-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 17 Proteins
transcript id: XM_030964983.1
SIO_010081: LOC115913102
subclass of: SO_0000673
so part of: LOC115913102
location: join(302632..302839,304779..304942,305068..305112,305449..305558,306116..306285,306496..306656,306896..307106,307215..307448,307615..307913)
location: region:302632-307913:1
so has part: feature:302632-302839:1:exon
so has part: feature:304779-304942:1:exon
so has part: feature:305068-305112:1:exon
so has part: feature:305449-305558:1:exon
so has part: feature:306116-306285:1:exon
so has part: feature:306496-306656:1:exon
so has part: feature:306896-307106:1:exon
so has part: feature:307215-307448:1:exon
so has part: feature:307615-307913:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:302632-302839:1:exon

position:302839:1
position: 302839
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:304779-304942:1:exon

position:304779:1
position: 304779
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:304942:1
position: 304942
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:305068-305112:1:exon

position:305068:1
position: 305068
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:305112:1
position: 305112
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:305449-305558:1:exon

position:305449:1
position: 305449
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:305558:1
position: 305558
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:306116-306285:1:exon

position:306116:1
position: 306116
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:306285:1
position: 306285
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:306496-306656:1:exon

position:306496:1
position: 306496
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:306656:1
position: 306656
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:306896-307106:1:exon

position:306896:1
position: 306896
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:307106:1
position: 307106
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:307215-307448:1:exon

position:307215:1
position: 307215
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:307448:1
position: 307448
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:307615-307913:1:exon

position:307615:1
position: 307615
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC115913102
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 87175
gene: LOC115913102
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: 5-hydroxytryptamine receptor 3A-like
translation: MQRERLIARLIGRSQKPDVVGKATRVPPASPLRSVPAERAAAAGSGPMVPAALGALLALLPLAATLQSPGTRPGGGTPEPSEPALRRLSHHLLAHYQKGTRPVRDWRTTTNVAIDLMVYAILSVDEKDQVLTTYIWYRQHWTDEFLKWDPARFDNLTQISLPVESIWVPDILINEFVDVGKSPHVPYVYVSHHGEVQNLKPIQVMTACSLDIYNFPFDVQNCSLTFTSWLHHIRDINLSLWRQPELVKFDQSVFMNQGEWELLYVLSHFQEFSVKSSDSYAEMKFYVVIRRRPLFYTVSLLLPSIFLMVMDIVGFYLPPHSGERVSFKITLLLGYSVFLIIVSDTLPATAVGTPLIGIYFVVCMALLVISLTETILIVCLVHKQDLQPHVPEWLKHLLLERATILLCIRDRKKFSQSRMQTLDTSRQVENNDSTAKPTPYVCEDPRECGAVGGTRSAPAFAGRPEGSAALQEVLRETTAIRQLLEKREEFRDLAREWLQVGYVLDVLLFRVYLAAVLAYSITLGTLWSVWRDA
SIO_010081: LOC115913102
subclass of: SO_0000673
so part of: LOC115913102
location: join(302632..302839,304779..304942,305068..305112,305449..305558,306116..306285,306496..306656,306896..307106,307215..307448,307615..307913)
location: region:302632-307913:1
so has part: feature:302632-302839:1:exon
so has part: feature:304779-304942:1:exon
so has part: feature:305068-305112:1:exon
so has part: feature:305449-305558:1:exon
so has part: feature:306116-306285:1:exon
so has part: feature:306496-306656:1:exon
so has part: feature:306896-307106:1:exon
so has part: feature:307215-307448:1:exon
so has part: feature:307615-307913:1:exon

XP_030820843.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:302632-302839:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:304779-304942:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:305068-305112:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:305449-305558:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:306116-306285:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:306496-306656:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:306896-307106:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:307215-307448:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:307615-307913:1:exon

ZBTB16
type: Gene
subclass of: SO_0000704
RO_0002162: 87175
gene: ZBTB16
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(311858..366129)
location: region:311858-366129:-1
so has part: feature:311858-366129:-1:exon
subclass of: SO_0000010

115913051
type: Gene
SIO_000068: ncbigene

position:311858:-1
position: 311858
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:366129:-1
position: 366129
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:311858-366129:-1:exon

ZBTB16
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 87175
gene: ZBTB16
product: zinc finger and BTB domain containing 16, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, 21 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_030964914.1
SIO_010081: ZBTB16
subclass of: SO_0000673
so part of: ZBTB16
location: complement(join(311858..313349,313596..313763,315903..316073,329164..329250,337526..337623,363933..365270,366001..366129))
location: region:311858-366129:-1
so has part: feature:366001-366129:-1:exon
so has part: feature:363933-365270:-1:exon
so has part: feature:337526-337623:-1:exon
so has part: feature:329164-329250:-1:exon
so has part: feature:315903-316073:-1:exon
so has part: feature:313596-313763:-1:exon
so has part: feature:311858-313349:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:366001-366129:-1:exon

position:366001:-1
position: 366001
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:363933-365270:-1:exon

position:363933:-1
position: 363933
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:365270:-1
position: 365270
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:337526-337623:-1:exon

position:337526:-1
position: 337526
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:337623:-1
position: 337623
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:329164-329250:-1:exon

position:329164:-1
position: 329164
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:329250:-1
position: 329250
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:315903-316073:-1:exon

position:315903:-1
position: 315903
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:316073:-1
position: 316073
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:313596-313763:-1:exon

position:313596:-1
position: 313596
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:313763:-1
position: 313763
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:311858-313349:-1:exon

position:313349:-1
position: 313349
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

ZBTB16
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 87175
gene: ZBTB16
product: zinc finger and BTB domain containing 16, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 1 EST, 21 Proteins, and 98% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_030964912.1
SIO_010081: ZBTB16
subclass of: SO_0000673
so part of: ZBTB16
location: complement(join(311858..313349,313596..313763,315903..316073,329164..329250,337526..337623,363933..365270,365763..365865))
location: region:311858-365865:-1
so has part: feature:365763-365865:-1:exon
so has part: feature:363933-365270:-1:exon
so has part: feature:337526-337623:-1:exon
so has part: feature:329164-329250:-1:exon
so has part: feature:315903-316073:-1:exon
so has part: feature:313596-313763:-1:exon
so has part: feature:311858-313349:-1:exon

position:365865:-1
position: 365865
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:365763-365865:-1:exon

position:365763:-1
position: 365763
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:363933-365270:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:337526-337623:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:329164-329250:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:315903-316073:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:313596-313763:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:311858-313349:-1:exon

ZBTB16
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 87175
gene: ZBTB16
product: zinc finger and BTB domain containing 16, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, 21 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_030964913.1
SIO_010081: ZBTB16
subclass of: SO_0000673
so part of: ZBTB16
location: complement(join(311858..313349,313596..313763,315903..316073,329164..329250,337526..337623,363933..365274,365763..365840))
location: region:311858-365840:-1
so has part: feature:365763-365840:-1:exon
so has part: feature:363933-365274:-1:exon
so has part: feature:337526-337623:-1:exon
so has part: feature:329164-329250:-1:exon
so has part: feature:315903-316073:-1:exon
so has part: feature:313596-313763:-1:exon
so has part: feature:311858-313349:-1:exon

position:365840:-1
position: 365840
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:365763-365840:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:363933-365274:-1:exon

position:365274:-1
position: 365274
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:337526-337623:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:329164-329250:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:315903-316073:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:313596-313763:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:311858-313349:-1:exon

ZBTB16
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 87175
gene: ZBTB16
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: zinc finger and BTB domain-containing protein 16
translation: MDLTKMGLIQLQNPCHPTGLLHKANQMRLAGTLCDVVIMVDSQEFHAHRTVLACTSKMFEILFHRNSQHYTLDFLSPKTFQQILEYAYTATLQAKVEDLDDLLYAAEILEIEYLEEQCLKILETIQASEDNDTEVAMADGGATATTEEEEEKKSRYIKGLFISKPTGEDGGYAGMASQSLLAATVEQSPSASVSYCSLSSMSPTKAAVDSLMTIGQSLLQGALPPSAPEDSRSATTRRPSGLAEVKTEAMQVDEASSHDSPRTAEPGASSGEKPDEKGKEGPGTPTRSSVITSARELHYTREEGAEPPPEPGQGLPLGPEPCAAAPGEKPLGIYSLLPNHKTEPVLGVPPTAASALHVQPALAVSMDFSAYGGLLPQGFIQRELFSKLGELAAGMKTESRALGEQCSVCGAELPDNETLEQHRKLHSGMKTYGCELCGKRFLDSLRLRMHLLAHSAGAKALVCDQCGAQFSKEDALETHRQTHTGTDMAVFCLLCGKRFQTQSALQQHMEVHAGVRSYICSECNRTFPSHTALKRHLRSHTGDHPYECEFCGSCFRDESTLKGHKRIHTGEKPYECNGCGKKFSLKHQLETHYRVHTGEKPFECKLCHQRSRDYSAMIKHLRTHNGASPYQCTICLEYCPSLSAMQKHMKGHKPEEIPTDWRIEKTYLYLCYV
SIO_010081: ZBTB16
subclass of: SO_0000673
so part of: ZBTB16
location: complement(join(313120..313349,313596..313763,315903..316073,329164..329250,337526..337623,363933..365200))
location: region:313120-365200:-1
so has part: feature:363933-365200:-1:exon
so has part: feature:337526-337623:-1:exon
so has part: feature:329164-329250:-1:exon
so has part: feature:315903-316073:-1:exon
so has part: feature:313596-313763:-1:exon
so has part: feature:313120-313349:-1:exon

XP_030820772.1
type: Protein
SIO_000068: ncbiprotein

position:313120:-1
position: 313120
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:365200:-1
position: 365200
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:363933-365200:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:337526-337623:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:329164-329250:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:315903-316073:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:313596-313763:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:313120-313349:-1:exon

ZBTB16
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 87175
gene: ZBTB16
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: zinc finger and BTB domain-containing protein 16
translation: MDLTKMGLIQLQNPCHPTGLLHKANQMRLAGTLCDVVIMVDSQEFHAHRTVLACTSKMFEILFHRNSQHYTLDFLSPKTFQQILEYAYTATLQAKVEDLDDLLYAAEILEIEYLEEQCLKILETIQASEDNDTEVAMADGGATATTEEEEEKKSRYIKGLFISKPTGEDGGYAGMASQSLLAATVEQSPSASVSYCSLSSMSPTKAAVDSLMTIGQSLLQGALPPSAPEDSRSATTRRPSGLAEVKTEAMQVDEASSHDSPRTAEPGASSGEKPDEKGKEGPGTPTRSSVITSARELHYTREEGAEPPPEPGQGLPLGPEPCAAAPGEKPLGIYSLLPNHKTEPVLGVPPTAASALHVQPALAVSMDFSAYGGLLPQGFIQRELFSKLGELAAGMKTESRALGEQCSVCGAELPDNETLEQHRKLHSGMKTYGCELCGKRFLDSLRLRMHLLAHSAGAKALVCDQCGAQFSKEDALETHRQTHTGTDMAVFCLLCGKRFQTQSALQQHMEVHAGVRSYICSECNRTFPSHTALKRHLRSHTGDHPYECEFCGSCFRDESTLKGHKRIHTGEKPYECNGCGKKFSLKHQLETHYRVHTGEKPFECKLCHQRSRDYSAMIKHLRTHNGASPYQCTICLEYCPSLSAMQKHMKGHKPEEIPTDWRIEKTYLYLCYV
SIO_010081: ZBTB16
subclass of: SO_0000673
so part of: ZBTB16
location: complement(join(313120..313349,313596..313763,315903..316073,329164..329250,337526..337623,363933..365200))
location: region:313120-365200:-1
so has part: feature:363933-365200:-1:exon
so has part: feature:337526-337623:-1:exon
so has part: feature:329164-329250:-1:exon
so has part: feature:315903-316073:-1:exon
so has part: feature:313596-313763:-1:exon
so has part: feature:313120-313349:-1:exon

XP_030820773.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:363933-365200:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:337526-337623:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:329164-329250:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:315903-316073:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:313596-313763:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:313120-313349:-1:exon

ZBTB16
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 87175
gene: ZBTB16
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: zinc finger and BTB domain-containing protein 16
translation: MDLTKMGLIQLQNPCHPTGLLHKANQMRLAGTLCDVVIMVDSQEFHAHRTVLACTSKMFEILFHRNSQHYTLDFLSPKTFQQILEYAYTATLQAKVEDLDDLLYAAEILEIEYLEEQCLKILETIQASEDNDTEVAMADGGATATTEEEEEKKSRYIKGLFISKPTGEDGGYAGMASQSLLAATVEQSPSASVSYCSLSSMSPTKAAVDSLMTIGQSLLQGALPPSAPEDSRSATTRRPSGLAEVKTEAMQVDEASSHDSPRTAEPGASSGEKPDEKGKEGPGTPTRSSVITSARELHYTREEGAEPPPEPGQGLPLGPEPCAAAPGEKPLGIYSLLPNHKTEPVLGVPPTAASALHVQPALAVSMDFSAYGGLLPQGFIQRELFSKLGELAAGMKTESRALGEQCSVCGAELPDNETLEQHRKLHSGMKTYGCELCGKRFLDSLRLRMHLLAHSAGAKALVCDQCGAQFSKEDALETHRQTHTGTDMAVFCLLCGKRFQTQSALQQHMEVHAGVRSYICSECNRTFPSHTALKRHLRSHTGDHPYECEFCGSCFRDESTLKGHKRIHTGEKPYECNGCGKKFSLKHQLETHYRVHTGEKPFECKLCHQRSRDYSAMIKHLRTHNGASPYQCTICLEYCPSLSAMQKHMKGHKPEEIPTDWRIEKTYLYLCYV
SIO_010081: ZBTB16
subclass of: SO_0000673
so part of: ZBTB16
location: complement(join(313120..313349,313596..313763,315903..316073,329164..329250,337526..337623,363933..365200))
location: region:313120-365200:-1
so has part: feature:363933-365200:-1:exon
so has part: feature:337526-337623:-1:exon
so has part: feature:329164-329250:-1:exon
so has part: feature:315903-316073:-1:exon
so has part: feature:313596-313763:-1:exon
so has part: feature:313120-313349:-1:exon

XP_030820774.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:363933-365200:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:337526-337623:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:329164-329250:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:315903-316073:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:313596-313763:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:313120-313349:-1:exon

RBM7
type: Gene
subclass of: SO_0000704
RO_0002162: 87175
gene: RBM7
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 384097..386835
location: region:384097-386835:1
so has part: feature:384097-386835:1:exon
subclass of: SO_0000010

115913073
type: Gene
SIO_000068: ncbigene

position:384097:1
position: 384097
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:386835:1
position: 386835
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:384097-386835:1:exon

RBM7
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 87175
gene: RBM7
product: RNA binding motif protein 7
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, 7 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
transcript id: XM_030964940.1
SIO_010081: RBM7
subclass of: SO_0000673
so part of: RBM7
location: join(384097..384263,384449..384611,385104..385206,385386..385452,385781..386835)
location: region:384097-386835:1
so has part: feature:384097-384263:1:exon
so has part: feature:384449-384611:1:exon
so has part: feature:385104-385206:1:exon
so has part: feature:385386-385452:1:exon
so has part: feature:385781-386835:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:384097-384263:1:exon

position:384263:1
position: 384263
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:384449-384611:1:exon

position:384449:1
position: 384449
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:384611:1
position: 384611
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:385104-385206:1:exon

position:385104:1
position: 385104
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:385206:1
position: 385206
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:385386-385452:1:exon

position:385386:1
position: 385386
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:385452:1
position: 385452
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:385781-386835:1:exon

position:385781:1
position: 385781
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

RBM7
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 87175
gene: RBM7
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: RNA-binding protein 7
translation: MGAAAAEANRTLFVGNLDPKVTEELIFELFHQAGPVITVKIPKDRDGRPKQFAFVNFKHEESVPYGLRLLNGIKLYGRPMRIQFRSGSSHAAQDISPSCSQLGAPGTNPPGMPHPASNCSRYERVPDGMGAPGFPSSLQRQAVMNSTARQQPQFGGKYGEQPGFGPPGYPHSFHGLPGSPGPRRLEGPRKARLGAHPYGPDGRHFGRERFGDGGPEYGRGKRDEYGFEERGHEGEHHYRGREEHYEERHRDGWSYEHRRDSYREAKWHSARH
SIO_010081: RBM7
subclass of: SO_0000673
so part of: RBM7
location: join(384168..384263,384449..384611,385104..385206,385386..385452,385781..386170)
location: region:384168-386170:1
so has part: feature:384168-384263:1:exon
so has part: feature:384449-384611:1:exon
so has part: feature:385104-385206:1:exon
so has part: feature:385386-385452:1:exon
so has part: feature:385781-386170:1:exon

XP_030820800.1
type: Protein
SIO_000068: ncbiprotein

position:384168:1
position: 384168
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:386170:1
position: 386170
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:384168-384263:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:384449-384611:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:385104-385206:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:385386-385452:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:385781-386170:1:exon

REXO2
type: Gene
subclass of: SO_0000704
RO_0002162: 87175
gene: REXO2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 387034..391960
location: region:387034-391960:1
so has part: feature:387034-391960:1:exon
subclass of: SO_0000010

115913042
type: Gene
SIO_000068: ncbigene

position:387034:1
position: 387034
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:391960:1
position: 391960
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:387034-391960:1:exon

REXO2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 87175
gene: REXO2
product: RNA exonuclease 2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 mRNAs, 12 ESTs, 5 Proteins, and 98% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
transcript id: XM_030964898.1
SIO_010081: REXO2
subclass of: SO_0000673
so part of: REXO2
location: join(387034..387165,387269..387352,387606..387683,389610..389721,390242..390350,390572..390625,391539..391960)
location: region:387034-391960:1
so has part: feature:387034-387165:1:exon
so has part: feature:387269-387352:1:exon
so has part: feature:387606-387683:1:exon
so has part: feature:389610-389721:1:exon
so has part: feature:390242-390350:1:exon
so has part: feature:390572-390625:1:exon
so has part: feature:391539-391960:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:387034-387165:1:exon

position:387165:1
position: 387165
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:387269-387352:1:exon

position:387269:1
position: 387269
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:387352:1
position: 387352
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:387606-387683:1:exon

position:387606:1
position: 387606
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:387683:1
position: 387683
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:389610-389721:1:exon

position:389610:1
position: 389610
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:389721:1
position: 389721
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:390242-390350:1:exon

position:390242:1
position: 390242
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:390350:1
position: 390350
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:390572-390625:1:exon

position:390572:1
position: 390572
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:390625:1
position: 390625
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:391539-391960:1:exon

position:391539:1
position: 391539
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

REXO2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 87175
gene: REXO2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: oligoribonuclease, mitochondrial
translation: MLGGGRAGLGRLRICAGRLWRGRRRAAAMAGGDMGQRMVWVDLEMTGLDVEKDQILEMACLITDCDLNVLAEGPNLIINQPDELLESMSEWCKEHHGKSGLTKAVKESKISLQQAEYEFLSFVRQQTPPGLCPLAGNSVHADKKFLDKYMPQFMRHLHYRIIDVSTVKELCRRWYPEEYEFAPKKAASHRALDDIRESIKELQFYRDHIFKRKTDEKKRKLIENGESDKAAS
SIO_010081: REXO2
subclass of: SO_0000673
so part of: REXO2
location: join(387034..387165,387269..387352,387606..387683,389610..389721,390242..390350,390572..390625,391539..391668)
location: region:387034-391668:1
so has part: feature:387034-387165:1:exon
so has part: feature:387269-387352:1:exon
so has part: feature:387606-387683:1:exon
so has part: feature:389610-389721:1:exon
so has part: feature:390242-390350:1:exon
so has part: feature:390572-390625:1:exon
so has part: feature:391539-391668:1:exon

XP_030820758.1
type: Protein
SIO_000068: ncbiprotein

position:391668:1
position: 391668
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:387034-387165:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:387269-387352:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:387606-387683:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:389610-389721:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:390242-390350:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:390572-390625:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:391539-391668:1:exon

CADM1
type: Gene
subclass of: SO_0000704
RO_0002162: 87175
gene: CADM1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(449205..586475)
location: region:449205-586475:-1
so has part: feature:449205-586475:-1:exon
subclass of: SO_0000010

115913115
type: Gene
SIO_000068: ncbigene

position:449205:-1
position: 449205
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:586475:-1
position: 586475
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:449205-586475:-1:exon

CADM1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 87175
gene: CADM1
product: cell adhesion molecule 1, transcript variant X5
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 31 ESTs, 3 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_030965007.1
SIO_010081: CADM1
subclass of: SO_0000673
so part of: CADM1
location: complement(join(449205..451372,451565..451696,465706..465738,478024..478196,480987..481086,488719..488874,490570..490707,493087..493239,494124..494270,586350..586475))
location: region:449205-586475:-1
so has part: feature:586350-586475:-1:exon
so has part: feature:494124-494270:-1:exon
so has part: feature:493087-493239:-1:exon
so has part: feature:490570-490707:-1:exon
so has part: feature:488719-488874:-1:exon
so has part: feature:480987-481086:-1:exon
so has part: feature:478024-478196:-1:exon
so has part: feature:465706-465738:-1:exon
so has part: feature:451565-451696:-1:exon
so has part: feature:449205-451372:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:586350-586475:-1:exon

position:586350:-1
position: 586350
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:494124-494270:-1:exon

position:494124:-1
position: 494124
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:494270:-1
position: 494270
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:493087-493239:-1:exon

position:493087:-1
position: 493087
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:493239:-1
position: 493239
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:490570-490707:-1:exon

position:490570:-1
position: 490570
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:490707:-1
position: 490707
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:488719-488874:-1:exon

position:488719:-1
position: 488719
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:488874:-1
position: 488874
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:480987-481086:-1:exon

position:480987:-1
position: 480987
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:481086:-1
position: 481086
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:478024-478196:-1:exon

position:478024:-1
position: 478024
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:478196:-1
position: 478196
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:465706-465738:-1:exon

position:465706:-1
position: 465706
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:465738:-1
position: 465738
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:451565-451696:-1:exon

position:451565:-1
position: 451565
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:451696:-1
position: 451696
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:449205-451372:-1:exon

position:451372:-1
position: 451372
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

CADM1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 87175
gene: CADM1
product: cell adhesion molecule 1, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 31 ESTs, 3 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_030965005.1
SIO_010081: CADM1
subclass of: SO_0000673
so part of: CADM1
location: complement(join(449205..451372,451565..451696,460443..460496,465706..465738,478024..478196,480987..481086,488719..488874,490570..490707,493087..493239,494124..494270,586350..586475))
location: region:449205-586475:-1
so has part: feature:586350-586475:-1:exon
so has part: feature:494124-494270:-1:exon
so has part: feature:493087-493239:-1:exon
so has part: feature:490570-490707:-1:exon
so has part: feature:488719-488874:-1:exon
so has part: feature:480987-481086:-1:exon
so has part: feature:478024-478196:-1:exon
so has part: feature:465706-465738:-1:exon
so has part: feature:460443-460496:-1:exon
so has part: feature:451565-451696:-1:exon
so has part: feature:449205-451372:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:586350-586475:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:494124-494270:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:493087-493239:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:490570-490707:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:488719-488874:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:480987-481086:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:478024-478196:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:465706-465738:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:460443-460496:-1:exon

position:460443:-1
position: 460443
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:460496:-1
position: 460496
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:451565-451696:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:449205-451372:-1:exon

CADM1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 87175
gene: CADM1
product: cell adhesion molecule 1, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 35 ESTs, and 99% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XM_030965006.1
SIO_010081: CADM1
subclass of: SO_0000673
so part of: CADM1
location: complement(join(449205..451372,451565..451696,474499..474570,478024..478196,480987..481086,488719..488874,490570..490707,493087..493239,494124..494270,586350..586475))
location: region:449205-586475:-1
so has part: feature:586350-586475:-1:exon
so has part: feature:494124-494270:-1:exon
so has part: feature:493087-493239:-1:exon
so has part: feature:490570-490707:-1:exon
so has part: feature:488719-488874:-1:exon
so has part: feature:480987-481086:-1:exon
so has part: feature:478024-478196:-1:exon
so has part: feature:474499-474570:-1:exon
so has part: feature:451565-451696:-1:exon
so has part: feature:449205-451372:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:586350-586475:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:494124-494270:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:493087-493239:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:490570-490707:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:488719-488874:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:480987-481086:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:478024-478196:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:474499-474570:-1:exon

position:474499:-1
position: 474499
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:474570:-1
position: 474570
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:451565-451696:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:449205-451372:-1:exon

CADM1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 87175
gene: CADM1
product: cell adhesion molecule 1, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 35 ESTs, 4 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XM_030965003.1
SIO_010081: CADM1
subclass of: SO_0000673
so part of: CADM1
location: complement(join(449205..451372,451565..451696,465706..465738,474499..474570,478024..478196,480987..481086,488719..488874,490570..490707,493087..493239,494124..494270,586350..586475))
location: region:449205-586475:-1
so has part: feature:586350-586475:-1:exon
so has part: feature:494124-494270:-1:exon
so has part: feature:493087-493239:-1:exon
so has part: feature:490570-490707:-1:exon
so has part: feature:488719-488874:-1:exon
so has part: feature:480987-481086:-1:exon
so has part: feature:478024-478196:-1:exon
so has part: feature:474499-474570:-1:exon
so has part: feature:465706-465738:-1:exon
so has part: feature:451565-451696:-1:exon
so has part: feature:449205-451372:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:586350-586475:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:494124-494270:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:493087-493239:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:490570-490707:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:488719-488874:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:480987-481086:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:478024-478196:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:474499-474570:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:465706-465738:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:451565-451696:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:449205-451372:-1:exon

CADM1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 87175
gene: CADM1
product: cell adhesion molecule 1, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 35 ESTs, 5 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_030965002.1
SIO_010081: CADM1
subclass of: SO_0000673
so part of: CADM1
location: complement(join(449205..451372,451565..451696,460443..460496,465706..465738,474499..474570,478024..478196,480987..481086,488719..488874,490570..490707,493087..493239,494124..494270,586350..586475))
location: region:449205-586475:-1
so has part: feature:586350-586475:-1:exon
so has part: feature:494124-494270:-1:exon
so has part: feature:493087-493239:-1:exon
so has part: feature:490570-490707:-1:exon
so has part: feature:488719-488874:-1:exon
so has part: feature:480987-481086:-1:exon
so has part: feature:478024-478196:-1:exon
so has part: feature:474499-474570:-1:exon
so has part: feature:465706-465738:-1:exon
so has part: feature:460443-460496:-1:exon
so has part: feature:451565-451696:-1:exon
so has part: feature:449205-451372:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:586350-586475:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:494124-494270:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:493087-493239:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:490570-490707:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:488719-488874:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:480987-481086:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:478024-478196:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:474499-474570:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:465706-465738:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:460443-460496:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:451565-451696:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:449205-451372:-1:exon

CADM1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 87175
gene: CADM1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: cell adhesion molecule 1 isoform X5
translation: MAGRAQPSGPAGSGGGAPGLLPLLLLLLSAAAIIPRGHGQNLVTEDVTVVEGDVATISCRVKNSDDSVIQLLNPNRQTIYFRDFRPLKDSRFQLVNFSNSELRVSLTNVSISDEGRYFCQLYTDPPQEIYTTITVLVPPRNLVIDIEKETAVEGEEIELNCTAMASRPATTIRWFKGNKELKGKSEVERWSDMYTVTSQLLLKVGREDDGVPVICLVDHPAVKDLQTQRYLEVMYKPQVRVSQNYPLQGLTREGEPLELTCTAFGKPQPTDMRWLRVDDEMPQHVVVSGSNLLISNLNKTDNGTYRCEASNAVGKSHADYMLFVYDTTATTEPAVHDSRAGEDGAIRSVDHAVVGGVVAVVVFAMLCLLIILGRYFARHKGTYFTHEAKGADDAADADTAIINAEGGQNNSEEKKEYFI
SIO_010081: CADM1
subclass of: SO_0000673
so part of: CADM1
location: complement(join(451254..451372,451565..451696,465706..465738,478024..478196,480987..481086,488719..488874,490570..490707,493087..493239,494124..494270,586350..586458))
location: region:451254-586458:-1
so has part: feature:586350-586458:-1:exon
so has part: feature:494124-494270:-1:exon
so has part: feature:493087-493239:-1:exon
so has part: feature:490570-490707:-1:exon
so has part: feature:488719-488874:-1:exon
so has part: feature:480987-481086:-1:exon
so has part: feature:478024-478196:-1:exon
so has part: feature:465706-465738:-1:exon
so has part: feature:451565-451696:-1:exon
so has part: feature:451254-451372:-1:exon

XP_030820867.1
type: Protein
SIO_000068: ncbiprotein

position:451254:-1
position: 451254
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:586458:-1
position: 586458
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:586350-586458:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:494124-494270:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:493087-493239:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:490570-490707:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:488719-488874:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:480987-481086:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:478024-478196:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:465706-465738:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:451565-451696:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:451254-451372:-1:exon

CADM1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 87175
gene: CADM1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: cell adhesion molecule 1 isoform X3
translation: MAGRAQPSGPAGSGGGAPGLLPLLLLLLSAAAIIPRGHGQNLVTEDVTVVEGDVATISCRVKNSDDSVIQLLNPNRQTIYFRDFRPLKDSRFQLVNFSNSELRVSLTNVSISDEGRYFCQLYTDPPQEIYTTITVLVPPRNLVIDIEKETAVEGEEIELNCTAMASRPATTIRWFKGNKELKGKSEVERWSDMYTVTSQLLLKVGREDDGVPVICLVDHPAVKDLQTQRYLEVMYKPQVRVSQNYPLQGLTREGEPLELTCTAFGKPQPTDMRWLRVDDEMPQHVVVSGSNLLISNLNKTDNGTYRCEASNAVGKSHADYMLFVYDTTATTEPAVHGFTQLPNSAEELDYGDLSDSRAGEDGAIRSVDHAVVGGVVAVVVFAMLCLLIILGRYFARHKGTYFTHEAKGADDAADADTAIINAEGGQNNSEEKKEYFI
SIO_010081: CADM1
subclass of: SO_0000673
so part of: CADM1
location: complement(join(451254..451372,451565..451696,460443..460496,465706..465738,478024..478196,480987..481086,488719..488874,490570..490707,493087..493239,494124..494270,586350..586458))
location: region:451254-586458:-1
so has part: feature:586350-586458:-1:exon
so has part: feature:494124-494270:-1:exon
so has part: feature:493087-493239:-1:exon
so has part: feature:490570-490707:-1:exon
so has part: feature:488719-488874:-1:exon
so has part: feature:480987-481086:-1:exon
so has part: feature:478024-478196:-1:exon
so has part: feature:465706-465738:-1:exon
so has part: feature:460443-460496:-1:exon
so has part: feature:451565-451696:-1:exon
so has part: feature:451254-451372:-1:exon

XP_030820865.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:586350-586458:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:494124-494270:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:493087-493239:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:490570-490707:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:488719-488874:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:480987-481086:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:478024-478196:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:465706-465738:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:460443-460496:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:451565-451696:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:451254-451372:-1:exon

CADM1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 87175
gene: CADM1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: cell adhesion molecule 1 isoform X4
translation: MAGRAQPSGPAGSGGGAPGLLPLLLLLLSAAAIIPRGHGQNLVTEDVTVVEGDVATISCRVKNSDDSVIQLLNPNRQTIYFRDFRPLKDSRFQLVNFSNSELRVSLTNVSISDEGRYFCQLYTDPPQEIYTTITVLVPPRNLVIDIEKETAVEGEEIELNCTAMASRPATTIRWFKGNKELKGKSEVERWSDMYTVTSQLLLKVGREDDGVPVICLVDHPAVKDLQTQRYLEVMYKPQVRVSQNYPLQGLTREGEPLELTCTAFGKPQPTDMRWLRVDDEMPQHVVVSGSNLLISNLNKTDNGTYRCEASNAVGKSHADYMLFVYDPPTTIPPPTTTTTTTTTIPTTITDSRAGEDGAIRSVDHAVVGGVVAVVVFAMLCLLIILGRYFARHKGTYFTHEAKGADDAADADTAIINAEGGQNNSEEKKEYFI
SIO_010081: CADM1
subclass of: SO_0000673
so part of: CADM1
location: complement(join(451254..451372,451565..451696,474499..474570,478024..478196,480987..481086,488719..488874,490570..490707,493087..493239,494124..494270,586350..586458))
location: region:451254-586458:-1
so has part: feature:586350-586458:-1:exon
so has part: feature:494124-494270:-1:exon
so has part: feature:493087-493239:-1:exon
so has part: feature:490570-490707:-1:exon
so has part: feature:488719-488874:-1:exon
so has part: feature:480987-481086:-1:exon
so has part: feature:478024-478196:-1:exon
so has part: feature:474499-474570:-1:exon
so has part: feature:451565-451696:-1:exon
so has part: feature:451254-451372:-1:exon

XP_030820866.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:586350-586458:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:494124-494270:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:493087-493239:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:490570-490707:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:488719-488874:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:480987-481086:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:478024-478196:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:474499-474570:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:451565-451696:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:451254-451372:-1:exon

CADM1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 87175
gene: CADM1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: cell adhesion molecule 1 isoform X2
translation: MAGRAQPSGPAGSGGGAPGLLPLLLLLLSAAAIIPRGHGQNLVTEDVTVVEGDVATISCRVKNSDDSVIQLLNPNRQTIYFRDFRPLKDSRFQLVNFSNSELRVSLTNVSISDEGRYFCQLYTDPPQEIYTTITVLVPPRNLVIDIEKETAVEGEEIELNCTAMASRPATTIRWFKGNKELKGKSEVERWSDMYTVTSQLLLKVGREDDGVPVICLVDHPAVKDLQTQRYLEVMYKPQVRVSQNYPLQGLTREGEPLELTCTAFGKPQPTDMRWLRVDDEMPQHVVVSGSNLLISNLNKTDNGTYRCEASNAVGKSHADYMLFVYDPPTTIPPPTTTTTTTTTIPTTITDTTATTEPAVHDSRAGEDGAIRSVDHAVVGGVVAVVVFAMLCLLIILGRYFARHKGTYFTHEAKGADDAADADTAIINAEGGQNNSEEKKEYFI
SIO_010081: CADM1
subclass of: SO_0000673
so part of: CADM1
location: complement(join(451254..451372,451565..451696,465706..465738,474499..474570,478024..478196,480987..481086,488719..488874,490570..490707,493087..493239,494124..494270,586350..586458))
location: region:451254-586458:-1
so has part: feature:586350-586458:-1:exon
so has part: feature:494124-494270:-1:exon
so has part: feature:493087-493239:-1:exon
so has part: feature:490570-490707:-1:exon
so has part: feature:488719-488874:-1:exon
so has part: feature:480987-481086:-1:exon
so has part: feature:478024-478196:-1:exon
so has part: feature:474499-474570:-1:exon
so has part: feature:465706-465738:-1:exon
so has part: feature:451565-451696:-1:exon
so has part: feature:451254-451372:-1:exon

XP_030820863.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:586350-586458:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:494124-494270:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:493087-493239:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:490570-490707:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:488719-488874:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:480987-481086:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:478024-478196:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:474499-474570:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:465706-465738:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:451565-451696:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:451254-451372:-1:exon

CADM1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 87175
gene: CADM1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: cell adhesion molecule 1 isoform X1
translation: MAGRAQPSGPAGSGGGAPGLLPLLLLLLSAAAIIPRGHGQNLVTEDVTVVEGDVATISCRVKNSDDSVIQLLNPNRQTIYFRDFRPLKDSRFQLVNFSNSELRVSLTNVSISDEGRYFCQLYTDPPQEIYTTITVLVPPRNLVIDIEKETAVEGEEIELNCTAMASRPATTIRWFKGNKELKGKSEVERWSDMYTVTSQLLLKVGREDDGVPVICLVDHPAVKDLQTQRYLEVMYKPQVRVSQNYPLQGLTREGEPLELTCTAFGKPQPTDMRWLRVDDEMPQHVVVSGSNLLISNLNKTDNGTYRCEASNAVGKSHADYMLFVYDPPTTIPPPTTTTTTTTTIPTTITDTTATTEPAVHGFTQLPNSAEELDYGDLSDSRAGEDGAIRSVDHAVVGGVVAVVVFAMLCLLIILGRYFARHKGTYFTHEAKGADDAADADTAIINAEGGQNNSEEKKEYFI
SIO_010081: CADM1
subclass of: SO_0000673
so part of: CADM1
location: complement(join(451254..451372,451565..451696,460443..460496,465706..465738,474499..474570,478024..478196,480987..481086,488719..488874,490570..490707,493087..493239,494124..494270,586350..586458))
location: region:451254-586458:-1
so has part: feature:586350-586458:-1:exon
so has part: feature:494124-494270:-1:exon
so has part: feature:493087-493239:-1:exon
so has part: feature:490570-490707:-1:exon
so has part: feature:488719-488874:-1:exon
so has part: feature:480987-481086:-1:exon
so has part: feature:478024-478196:-1:exon
so has part: feature:474499-474570:-1:exon
so has part: feature:465706-465738:-1:exon
so has part: feature:460443-460496:-1:exon
so has part: feature:451565-451696:-1:exon
so has part: feature:451254-451372:-1:exon

XP_030820862.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:586350-586458:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:494124-494270:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:493087-493239:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:490570-490707:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:488719-488874:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:480987-481086:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:478024-478196:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:474499-474570:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:465706-465738:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:460443-460496:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:451565-451696:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:451254-451372:-1:exon

BUD13
type: Gene
subclass of: SO_0000704
RO_0002162: 87175
gene: BUD13
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(793119..798961)
location: region:793119-798961:-1
so has part: feature:793119-798961:-1:exon
subclass of: SO_0000010

115913030
type: Gene
SIO_000068: ncbigene

position:793119:-1
position: 793119
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:798961:-1
position: 798961
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:793119-798961:-1:exon

BUD13
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 87175
gene: BUD13
product: BUD13 homolog
exception: unclassified transcription discrepancy
note: The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: inserted 2 bases in 1 codon; deleted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, 2 Proteins, and 98% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
transcript id: XM_030964883.1
SIO_010081: BUD13
subclass of: SO_0000673
so part of: BUD13
location: complement(join(793119..794254,794536..794617,794937..795118,795382..795520,795901..796009,796182..796276,796576..797512,797900..797951,798092..798176,798513..798603,798833..798961))
location: region:793119-798961:-1
so has part: feature:798833-798961:-1:exon
so has part: feature:798513-798603:-1:exon
so has part: feature:798092-798176:-1:exon
so has part: feature:797900-797951:-1:exon
so has part: feature:796576-797512:-1:exon
so has part: feature:796182-796276:-1:exon
so has part: feature:795901-796009:-1:exon
so has part: feature:795382-795520:-1:exon
so has part: feature:794937-795118:-1:exon
so has part: feature:794536-794617:-1:exon
so has part: feature:793119-794254:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:798833-798961:-1:exon

position:798833:-1
position: 798833
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:798513-798603:-1:exon

position:798513:-1
position: 798513
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:798603:-1
position: 798603
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:798092-798176:-1:exon

position:798092:-1
position: 798092
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:798176:-1
position: 798176
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:797900-797951:-1:exon

position:797900:-1
position: 797900
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:797951:-1
position: 797951
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:796576-797512:-1:exon

position:796576:-1
position: 796576
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:797512:-1
position: 797512
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:796182-796276:-1:exon

position:796182:-1
position: 796182
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:796276:-1
position: 796276
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:795901-796009:-1:exon

position:795901:-1
position: 795901
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:796009:-1
position: 796009
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:795382-795520:-1:exon

position:795382:-1
position: 795382
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:795520:-1
position: 795520
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:794937-795118:-1:exon

position:794937:-1
position: 794937
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:795118:-1
position: 795118
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:794536-794617:-1:exon

position:794536:-1
position: 794536
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:794617:-1
position: 794617
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:793119-794254:-1:exon

position:794254:-1
position: 794254
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

BUD13
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 87175
gene: BUD13
exception: unclassified translation discrepancy
note: The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: inserted 2 bases in 1 codon; deleted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: LOW QUALITY PROTEIN: BUD13 homolog
translation: MAAPGLSKAEYLRRYLSGPAESGPPRRRRRRKPPGGTARGGMRIVDDDVSWNSIAAAPEKEEEEDEGDMPVVAEFIDERPEEVKLMEEFRTNTKWKLLGDEDSQSSDVSGSAKSVTRRRHQDSPEPSATAGKHNGSLGLSAPRRQRHDTPDLSPPRRQRHDTPDVSPPRRQRHDTPDPSPPRRHRHDTPDLSSPKKQRRDTLDLSPPRRRRRHDTPDPSPPRRQRHDTPDVSPPRRQRHDTPDLSPPRRRQRHDSPDPSPPRRQRHDTPDLSPPRRQRHDTPDLSPPRRQRHDTPDLSPPRRQRHDTPDLSPPRRQRHDTPDLSPPRRQRHDTPDLSPPRRQRHDTPDLSPPRRQRHDTPDLSLPETETRXTPDLSPPRRQRHDTPDLSPPRRQRHDTPDLSPPRRQHQDLSPRREKPGSPSGRKSRTKGRASPTQRDQQRSRSPPEHSPRHRDAKGSPKKASTMSSGAKAGLVSADVLQREKQELRKHERNTKHLEEESRNAQTVFRDKSGRKRNLAQEQLEQRLKAEAEAKREEQYAKWGKGLAQERQQQQNVEDAVKEMQKPLARYIDDQDLDRMLREQEREGDPMAALIKKRKAKESKEKEKPRYKGPAPPLNRFNIWPGHRWDGVDRSNGFEQQRFARIANKKAVQELAYKWSVEDM
SIO_010081: BUD13
subclass of: SO_0000673
so part of: BUD13
location: complement(join(794161..794254,794536..794617,794937..795118,795382..795520,795901..796009,796182..796276,796576..797512,797900..797951,798092..798176,798513..798603,798833..798954))
location: region:794161-798954:-1
so has part: feature:798833-798954:-1:exon
so has part: feature:798513-798603:-1:exon
so has part: feature:798092-798176:-1:exon
so has part: feature:797900-797951:-1:exon
so has part: feature:796576-797512:-1:exon
so has part: feature:796182-796276:-1:exon
so has part: feature:795901-796009:-1:exon
so has part: feature:795382-795520:-1:exon
so has part: feature:794937-795118:-1:exon
so has part: feature:794536-794617:-1:exon
so has part: feature:794161-794254:-1:exon

XP_030820743.1
type: Protein
SIO_000068: ncbiprotein

position:794161:-1
position: 794161
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:798954:-1
position: 798954
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:798833-798954:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:798513-798603:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:798092-798176:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:797900-797951:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:796576-797512:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:796182-796276:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:795901-796009:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:795382-795520:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:794937-795118:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:794536-794617:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:794161-794254:-1:exon

ZPR1
type: Gene
subclass of: SO_0000704
RO_0002162: 87175
gene: ZPR1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(799538..802930)
location: region:799538-802930:-1
so has part: feature:799538-802930:-1:exon
subclass of: SO_0000010

115913050
type: Gene
SIO_000068: ncbigene

position:799538:-1
position: 799538
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:802930:-1
position: 802930
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:799538-802930:-1:exon

ZPR1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 87175
gene: ZPR1
product: ZPR1 zinc finger
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 12 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
transcript id: XM_030964911.1
SIO_010081: ZPR1
subclass of: SO_0000673
so part of: ZPR1
location: complement(join(799538..799872,800069..800134,800229..800315,800398..800508,800592..800681,800896..800966,801155..801221,801353..801406,801488..801610,801686..801772,801970..802040,802121..802211,802340..802501,802793..802930))
location: region:799538-802930:-1
so has part: feature:802793-802930:-1:exon
so has part: feature:802340-802501:-1:exon
so has part: feature:802121-802211:-1:exon
so has part: feature:801970-802040:-1:exon
so has part: feature:801686-801772:-1:exon
so has part: feature:801488-801610:-1:exon
so has part: feature:801353-801406:-1:exon
so has part: feature:801155-801221:-1:exon
so has part: feature:800896-800966:-1:exon
so has part: feature:800592-800681:-1:exon
so has part: feature:800398-800508:-1:exon
so has part: feature:800229-800315:-1:exon
so has part: feature:800069-800134:-1:exon
so has part: feature:799538-799872:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:802793-802930:-1:exon

position:802793:-1
position: 802793
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:802340-802501:-1:exon

position:802340:-1
position: 802340
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:802501:-1
position: 802501
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:802121-802211:-1:exon

position:802121:-1
position: 802121
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:802211:-1
position: 802211
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:801970-802040:-1:exon

position:801970:-1
position: 801970
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:802040:-1
position: 802040
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:801686-801772:-1:exon

position:801686:-1
position: 801686
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:801772:-1
position: 801772
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:801488-801610:-1:exon

position:801488:-1
position: 801488
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:801610:-1
position: 801610
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:801353-801406:-1:exon

position:801353:-1
position: 801353
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:801406:-1
position: 801406
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:801155-801221:-1:exon

position:801155:-1
position: 801155
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:801221:-1
position: 801221
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:800896-800966:-1:exon

position:800896:-1
position: 800896
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:800966:-1
position: 800966
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:800592-800681:-1:exon

position:800592:-1
position: 800592
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:800681:-1
position: 800681
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:800398-800508:-1:exon

position:800398:-1
position: 800398
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:800508:-1
position: 800508
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:800229-800315:-1:exon

position:800229:-1
position: 800229
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:800315:-1
position: 800315
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:800069-800134:-1:exon

position:800069:-1
position: 800069
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:800134:-1
position: 800134
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:799538-799872:-1:exon

position:799872:-1
position: 799872
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

ZPR1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 87175
gene: ZPR1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: zinc finger protein ZPR1
translation: MSALGATAAAAAPAGALFRPLSAEDGEQQPAEIESLCMNCFRNGVTRLLLTRIPFFKEIIVSSFSCPSCSWSNTEIQAAGRIQEQGVRYTLAVTSRQDMNREVVKTDCASVRIPELDFEVPAFSQKGVLTTIEGIIDRAVAGLEQDQPARRATDAEVARKIDEFIGKLRQLKDVSSPFTFVLDDPSGNSFVENPRAPQRDEALLVAHYRRSPQQCALLGLQGEEVDAKPPDAAEDLRDEVLQFNTNCPECNAPASTNMKLVQIPHFKEVIIMATNCDSCGHRTNEVKSGGAIEEQGTRITLRITDPSDMTRDILKSETCSVEIPELEFELGMGALGGKFTTLEGLLKDIQDLVEKNPFTLGDSSTASRTGKLQEFIGKLQDIIEGKAQAHFIMDDPAGNSYLQNVYAPEEDPELSVQRYERTFEQNEELGLNDMRTEGYEAEPASGR
SIO_010081: ZPR1
subclass of: SO_0000673
so part of: ZPR1
location: complement(join(799738..799872,800069..800134,800229..800315,800398..800508,800592..800681,800896..800966,801155..801221,801353..801406,801488..801610,801686..801772,801970..802040,802121..802211,802340..802501,802793..802921))
location: region:799738-802921:-1
so has part: feature:802793-802921:-1:exon
so has part: feature:802340-802501:-1:exon
so has part: feature:802121-802211:-1:exon
so has part: feature:801970-802040:-1:exon
so has part: feature:801686-801772:-1:exon
so has part: feature:801488-801610:-1:exon
so has part: feature:801353-801406:-1:exon
so has part: feature:801155-801221:-1:exon
so has part: feature:800896-800966:-1:exon
so has part: feature:800592-800681:-1:exon
so has part: feature:800398-800508:-1:exon
so has part: feature:800229-800315:-1:exon
so has part: feature:800069-800134:-1:exon
so has part: feature:799738-799872:-1:exon

XP_030820771.1
type: Protein
SIO_000068: ncbiprotein

position:799738:-1
position: 799738
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:802921:-1
position: 802921
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:802793-802921:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:802340-802501:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:802121-802211:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:801970-802040:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:801686-801772:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:801488-801610:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:801353-801406:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:801155-801221:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:800896-800966:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:800592-800681:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:800398-800508:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:800229-800315:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:800069-800134:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:799738-799872:-1:exon

LOC115913160
type: Gene
subclass of: SO_0000704
RO_0002162: 87175
gene: LOC115913160
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 802988..808977
location: region:802988-808977:1
so has part: feature:802988-808977:1:exon
subclass of: SO_0000010

115913160
type: Gene
SIO_000068: ncbigene

position:802988:1
position: 802988
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:808977:1
position: 808977
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:802988-808977:1:exon

LOC115913160
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 87175
gene: LOC115913160
product: apolipoprotein C-III-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XM_030965081.1
SIO_010081: LOC115913160
subclass of: SO_0000673
so part of: LOC115913160
location: join(802988..808313,808406..808465,808580..808706,808804..808977)
location: region:802988-808977:1
so has part: feature:802988-808313:1:exon
so has part: feature:808406-808465:1:exon
so has part: feature:808580-808706:1:exon
so has part: feature:808804-808977:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:802988-808313:1:exon

position:808313:1
position: 808313
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:808406-808465:1:exon

position:808406:1
position: 808406
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:808465:1
position: 808465
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:808580-808706:1:exon

position:808580:1
position: 808580
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:808706:1
position: 808706
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:808804-808977:1:exon

position:808804:1
position: 808804
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

APOA5
type: Gene
subclass of: SO_0000704
RO_0002162: 87175
gene: APOA5
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(803015..804614)
location: region:803015-804614:-1
so has part: feature:803015-804614:-1:exon
subclass of: SO_0000010

115912970
type: Gene
SIO_000068: ncbigene

position:803015:-1
position: 803015
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:804614:-1
position: 804614
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:803015-804614:-1:exon

APOA5
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 87175
gene: APOA5
product: apolipoprotein A5
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 Proteins, and 66% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_030964778.1
SIO_010081: APOA5
subclass of: SO_0000673
so part of: APOA5
location: complement(join(803015..803999,804128..804275,804308..804614))
location: region:803015-804614:-1
so has part: feature:804308-804614:-1:exon
so has part: feature:804128-804275:-1:exon
so has part: feature:803015-803999:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:804308-804614:-1:exon

position:804308:-1
position: 804308
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:804128-804275:-1:exon

position:804128:-1
position: 804128
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:804275:-1
position: 804275
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:803015-803999:-1:exon

position:803999:-1
position: 803999
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

APOA5
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 87175
gene: APOA5
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: apolipoprotein A-V
translation: MLLKAALLLSLLAACPGGCGRGGGRAAAAAAVALPPAVSPAGAAQSGLWRYLSQLTGDKDSHSKPGSDSTNLKESVQDGVSSMAGFLEKLSPLGTGLQPPRLGEDPASLRKALRRELDSLRRQLSPYVDEVHQQVGRQLDELRQQLRPLTEELLDQVSLRARELRRRLVPSREVAAQLLDGADELQRFVAHYGDKIAFHTEQVKDIFQPYAERLLSEIHRNVQELHRGVAPHARASPEQLNQHIQELSAKLTRNARDLHRQIQRNLEQLKAKLSLYPGGAAAAPGRSREALAREVQRRVEEFRRDTYAQIQAFTRALDQETEEMRLKLSARPEPPEGPLDAPPPPVEDLRARLDALWRDLALSLSERGGEGPGEGPEGGPGGDLGEGPGAGPGRLRR
SIO_010081: APOA5
subclass of: SO_0000673
so part of: APOA5
location: complement(join(803015..803999,804128..804275,804308..804368))
location: region:803015-804368:-1
so has part: feature:804308-804368:-1:exon
so has part: feature:804128-804275:-1:exon
so has part: feature:803015-803999:-1:exon

XP_030820638.1
type: Protein
SIO_000068: ncbiprotein

position:804368:-1
position: 804368
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:804308-804368:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:804128-804275:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:803015-803999:-1:exon

APOA4
type: Gene
subclass of: SO_0000704
RO_0002162: 87175
gene: APOA4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(805784..807375)
location: region:805784-807375:-1
so has part: feature:805784-807375:-1:exon
subclass of: SO_0000010

115913161
type: Gene
SIO_000068: ncbigene

position:805784:-1
position: 805784
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:807375:-1
position: 807375
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:805784-807375:-1:exon

APOA4
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 87175
gene: APOA4
product: apolipoprotein A4
exception: unclassified transcription discrepancy
note: The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: inserted 1 base in 1 codon; deleted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 Proteins, and 15% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_030965082.1
SIO_010081: APOA4
subclass of: SO_0000673
so part of: APOA4
location: complement(join(805784..806711,806801..806927,807035..807101,807214..807375))
location: region:805784-807375:-1
so has part: feature:807214-807375:-1:exon
so has part: feature:807035-807101:-1:exon
so has part: feature:806801-806927:-1:exon
so has part: feature:805784-806711:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:807214-807375:-1:exon

position:807214:-1
position: 807214
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:807035-807101:-1:exon

position:807035:-1
position: 807035
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:807101:-1
position: 807101
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:806801-806927:-1:exon

position:806801:-1
position: 806801
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:806927:-1
position: 806927
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:805784-806711:-1:exon

position:806711:-1
position: 806711
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

APOA4
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 87175
gene: APOA4
exception: unclassified translation discrepancy
note: The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: inserted 1 base in 1 codon; deleted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: LOW QUALITY PROTEIN: apolipoprotein A-IV
translation: MSGLRTRQAPPRRDRXKVQALAVSQPAWKLQEPSGCINSAGSAGSAATAALAAQESPALRMAPKAAALVLVLLAISGSRADVNPDEVASVIWKYFTELGSNAKDTAEQLHQSELSKQLNTLLKSNLQSVSAYAEDLQQRLEPFAMELHAKLAQDSQRLKEQIQRELQELQAKLAPYADQVHQQIGTNIRQLQARMGPYAEELRSQVDRSAGELRRALEPYAAELRERLQDNAESVQASLSPYAERLQQQIDGGVEGVKQRLSPVADELKAQVEQSVAELRRGLSPYAQEVRDGLERQLQSLSAQMERAAEELRARLAASSEELRAQLSPLARELREAASGDAESLRQRLQPLAQQLEQRLGQSLETFRQQAAPFGETFGQQLVQRLEEMRGKLDSGAAGVEDHLELLEKEVRDKVAAFLSTAAPPQN
SIO_010081: APOA4
subclass of: SO_0000673
so part of: APOA4
location: complement(join(805784..806711,806801..806927,807035..807101,807214..807375))
location: region:805784-807375:-1
so has part: feature:807214-807375:-1:exon
so has part: feature:807035-807101:-1:exon
so has part: feature:806801-806927:-1:exon
so has part: feature:805784-806711:-1:exon

XP_030820942.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:807214-807375:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:807035-807101:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:806801-806927:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:805784-806711:-1:exon

LOC115913160
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 87175
gene: LOC115913160
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: apolipoprotein C-III-like
translation: MKASLLFLLACTAVLALGARADSSEDSKALVQKVQELAQKVSAMTKDAFSRVRESEAAQQARQWLSDNAELAKQRLLWLKEQLAELLKKTPAS
SIO_010081: LOC115913160
subclass of: SO_0000673
so part of: LOC115913160
location: join(808408..808465,808580..808706,808804..808900)
location: region:808408-808900:1
so has part: feature:808408-808465:1:exon
so has part: feature:808580-808706:1:exon
so has part: feature:808804-808900:1:exon

XP_030820941.1
type: Protein
SIO_000068: ncbiprotein

position:808408:1
position: 808408
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:808900:1
position: 808900
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:808408-808465:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:808580-808706:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:808804-808900:1:exon

APOA1
type: Gene
subclass of: SO_0000704
RO_0002162: 87175
gene: APOA1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(809401..811016)
location: region:809401-811016:-1
so has part: feature:809401-811016:-1:exon
subclass of: SO_0000010

115912992
type: Gene
SIO_000068: ncbigene

position:809401:-1
position: 809401
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:811016:-1
position: 811016
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:809401-811016:-1:exon

APOA1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 87175
gene: APOA1
product: apolipoprotein A1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 15 mRNAs, 379 ESTs, 19 Proteins, and 97% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
transcript id: XM_030964812.1
SIO_010081: APOA1
subclass of: SO_0000673
so part of: APOA1
location: complement(join(809401..810222,810299..810452,810671..810726,810856..811016))
location: region:809401-811016:-1
so has part: feature:810856-811016:-1:exon
so has part: feature:810671-810726:-1:exon
so has part: feature:810299-810452:-1:exon
so has part: feature:809401-810222:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:810856-811016:-1:exon

position:810856:-1
position: 810856
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:810671-810726:-1:exon

position:810671:-1
position: 810671
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:810726:-1
position: 810726
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:810299-810452:-1:exon

position:810299:-1
position: 810299
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:810452:-1
position: 810452
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:809401-810222:-1:exon

position:810222:-1
position: 810222
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

APOA1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 87175
gene: APOA1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: apolipoprotein A-I
translation: MRAVVLTLALLCLTGTQARSFWQHDEPQAPLDRLKDMLDVYLDSVKASGKEAIAQFEASTVGKQLDLKLGENLDTLGAAAAKLREDMAPYYKEVREMWLKDTESLRAELTKDLEEVKEKIKPFLDQFSAKWTEDLEQYRQRLAPLAQELKELSKQKVELLQQKLTPVAEEARDRLRGHVEELRKNVAPFSDELRQKLSQKLEEIREKGIPQAAEYQAKVVEQLSSLREKMTPLVQDFKERLTPYTESLKARFLSLLEELQKTVA
SIO_010081: APOA1
subclass of: SO_0000673
so part of: APOA1
location: complement(join(809625..810222,810299..810452,810671..810713))
location: region:809625-810713:-1
so has part: feature:810671-810713:-1:exon
so has part: feature:810299-810452:-1:exon
so has part: feature:809625-810222:-1:exon

XP_030820672.1
type: Protein
SIO_000068: ncbiprotein

position:809625:-1
position: 809625
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:810713:-1
position: 810713
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:810671-810713:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:810299-810452:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:809625-810222:-1:exon

SIK3
type: Gene
subclass of: SO_0000704
RO_0002162: 87175
gene: SIK3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(812013..881078)
location: region:812013-881078:-1
so has part: feature:812013-881078:-1:exon
subclass of: SO_0000010

115913021
type: Gene
SIO_000068: ncbigene

position:812013:-1
position: 812013
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:881078:-1
position: 881078
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:812013-881078:-1:exon

SIK3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 87175
gene: SIK3
product: SIK family kinase 3, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 4 ESTs, 5 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
transcript id: XM_030964868.1
SIO_010081: SIK3
subclass of: SO_0000673
so part of: SIK3
location: complement(join(812013..813624,813923..814090,814175..814307,815005..815168,818666..819537,819782..820121,820722..820831,821488..821573,821887..822012,822740..822890,825518..825661,828581..828651,829148..829303,830111..830264,830713..830822,830933..831013,831557..831700,831837..831947,832286..832404,833111..833234,833494..833618,838656..838817,844364..844427,845646..845762,880893..881078))
location: region:812013-881078:-1
so has part: feature:880893-881078:-1:exon
so has part: feature:845646-845762:-1:exon
so has part: feature:844364-844427:-1:exon
so has part: feature:838656-838817:-1:exon
so has part: feature:833494-833618:-1:exon
so has part: feature:833111-833234:-1:exon
so has part: feature:832286-832404:-1:exon
so has part: feature:831837-831947:-1:exon
so has part: feature:831557-831700:-1:exon
so has part: feature:830933-831013:-1:exon
so has part: feature:830713-830822:-1:exon
so has part: feature:830111-830264:-1:exon
so has part: feature:829148-829303:-1:exon
so has part: feature:828581-828651:-1:exon
so has part: feature:825518-825661:-1:exon
so has part: feature:822740-822890:-1:exon
so has part: feature:821887-822012:-1:exon
so has part: feature:821488-821573:-1:exon
so has part: feature:820722-820831:-1:exon
so has part: feature:819782-820121:-1:exon
so has part: feature:818666-819537:-1:exon
so has part: feature:815005-815168:-1:exon
so has part: feature:814175-814307:-1:exon
so has part: feature:813923-814090:-1:exon
so has part: feature:812013-813624:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:880893-881078:-1:exon

position:880893:-1
position: 880893
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:845646-845762:-1:exon

position:845646:-1
position: 845646
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:845762:-1
position: 845762
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:844364-844427:-1:exon

position:844364:-1
position: 844364
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:844427:-1
position: 844427
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:838656-838817:-1:exon

position:838656:-1
position: 838656
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:838817:-1
position: 838817
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:833494-833618:-1:exon

position:833494:-1
position: 833494
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:833618:-1
position: 833618
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:833111-833234:-1:exon

position:833111:-1
position: 833111
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:833234:-1
position: 833234
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:832286-832404:-1:exon

position:832286:-1
position: 832286
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:832404:-1
position: 832404
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:831837-831947:-1:exon

position:831837:-1
position: 831837
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:831947:-1
position: 831947
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:831557-831700:-1:exon

position:831557:-1
position: 831557
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:831700:-1
position: 831700
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:830933-831013:-1:exon

position:830933:-1
position: 830933
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:831013:-1
position: 831013
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:830713-830822:-1:exon

position:830713:-1
position: 830713
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:830822:-1
position: 830822
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:830111-830264:-1:exon

position:830111:-1
position: 830111
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:830264:-1
position: 830264
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:829148-829303:-1:exon

position:829148:-1
position: 829148
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:829303:-1
position: 829303
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:828581-828651:-1:exon

position:828581:-1
position: 828581
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:828651:-1
position: 828651
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:825518-825661:-1:exon

position:825518:-1
position: 825518
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:825661:-1
position: 825661
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:822740-822890:-1:exon

position:822740:-1
position: 822740
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:822890:-1
position: 822890
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:821887-822012:-1:exon

position:821887:-1
position: 821887
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:822012:-1
position: 822012
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:821488-821573:-1:exon

position:821488:-1
position: 821488
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:821573:-1
position: 821573
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:820722-820831:-1:exon

position:820722:-1
position: 820722
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:820831:-1
position: 820831
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:819782-820121:-1:exon

position:819782:-1
position: 819782
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:820121:-1
position: 820121
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:818666-819537:-1:exon

position:818666:-1
position: 818666
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:819537:-1
position: 819537
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 22
SIO_000628: feature:815005-815168:-1:exon

position:815005:-1
position: 815005
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:815168:-1
position: 815168
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 23
SIO_000628: feature:814175-814307:-1:exon

position:814175:-1
position: 814175
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:814307:-1
position: 814307
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 24
SIO_000628: feature:813923-814090:-1:exon

position:813923:-1
position: 813923
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:814090:-1
position: 814090
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 25
SIO_000628: feature:812013-813624:-1:exon

position:813624:-1
position: 813624
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

SIK3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 87175
gene: SIK3
product: SIK family kinase 3, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 4 ESTs, 4 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XM_030964873.1
SIO_010081: SIK3
subclass of: SO_0000673
so part of: SIK3
location: complement(join(813467..813624,813923..814090,814175..814307,815005..815168,818666..819537,819782..820121,820722..820831,821488..821573,821887..822012,822740..822890,828581..828651,829148..829303,830111..830264,830713..830822,830933..831010,831557..831700,831837..831947,832286..832404,833111..833234,833494..833618,838656..838817,844364..844427,845646..845762,880893..881063))
location: region:813467-881063:-1
so has part: feature:880893-881063:-1:exon
so has part: feature:845646-845762:-1:exon
so has part: feature:844364-844427:-1:exon
so has part: feature:838656-838817:-1:exon
so has part: feature:833494-833618:-1:exon
so has part: feature:833111-833234:-1:exon
so has part: feature:832286-832404:-1:exon
so has part: feature:831837-831947:-1:exon
so has part: feature:831557-831700:-1:exon
so has part: feature:830933-831010:-1:exon
so has part: feature:830713-830822:-1:exon
so has part: feature:830111-830264:-1:exon
so has part: feature:829148-829303:-1:exon
so has part: feature:828581-828651:-1:exon
so has part: feature:822740-822890:-1:exon
so has part: feature:821887-822012:-1:exon
so has part: feature:821488-821573:-1:exon
so has part: feature:820722-820831:-1:exon
so has part: feature:819782-820121:-1:exon
so has part: feature:818666-819537:-1:exon
so has part: feature:815005-815168:-1:exon
so has part: feature:814175-814307:-1:exon
so has part: feature:813923-814090:-1:exon
so has part: feature:813467-813624:-1:exon

position:813467:-1
position: 813467
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:881063:-1
position: 881063
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:880893-881063:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:845646-845762:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:844364-844427:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:838656-838817:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:833494-833618:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:833111-833234:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:832286-832404:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:831837-831947:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:831557-831700:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:830933-831010:-1:exon

position:831010:-1
position: 831010
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:830713-830822:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:830111-830264:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:829148-829303:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:828581-828651:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:822740-822890:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:821887-822012:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:821488-821573:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:820722-820831:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:819782-820121:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:818666-819537:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:815005-815168:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:814175-814307:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:813923-814090:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:813467-813624:-1:exon

SIK3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 87175
gene: SIK3
product: SIK family kinase 3, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 5 ESTs, 6 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
transcript id: XM_030964870.1
SIO_010081: SIK3
subclass of: SO_0000673
so part of: SIK3
location: complement(join(813467..813624,813923..814090,814175..814307,815005..815168,818666..819537,819782..820121,820722..820831,821488..821573,821887..822012,822740..822890,825518..825661,828581..828651,829148..829303,830111..830264,830713..830822,830933..831010,831557..831700,831837..831947,832286..832404,833111..833234,833494..833618,838656..838817,844364..844427,845646..845762,880893..881063))
location: region:813467-881063:-1
so has part: feature:880893-881063:-1:exon
so has part: feature:845646-845762:-1:exon
so has part: feature:844364-844427:-1:exon
so has part: feature:838656-838817:-1:exon
so has part: feature:833494-833618:-1:exon
so has part: feature:833111-833234:-1:exon
so has part: feature:832286-832404:-1:exon
so has part: feature:831837-831947:-1:exon
so has part: feature:831557-831700:-1:exon
so has part: feature:830933-831010:-1:exon
so has part: feature:830713-830822:-1:exon
so has part: feature:830111-830264:-1:exon
so has part: feature:829148-829303:-1:exon
so has part: feature:828581-828651:-1:exon
so has part: feature:825518-825661:-1:exon
so has part: feature:822740-822890:-1:exon
so has part: feature:821887-822012:-1:exon
so has part: feature:821488-821573:-1:exon
so has part: feature:820722-820831:-1:exon
so has part: feature:819782-820121:-1:exon
so has part: feature:818666-819537:-1:exon
so has part: feature:815005-815168:-1:exon
so has part: feature:814175-814307:-1:exon
so has part: feature:813923-814090:-1:exon
so has part: feature:813467-813624:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:880893-881063:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:845646-845762:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:844364-844427:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:838656-838817:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:833494-833618:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:833111-833234:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:832286-832404:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:831837-831947:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:831557-831700:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:830933-831010:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:830713-830822:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:830111-830264:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:829148-829303:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:828581-828651:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:825518-825661:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:822740-822890:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:821887-822012:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:821488-821573:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:820722-820831:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:819782-820121:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:818666-819537:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:815005-815168:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:814175-814307:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:813923-814090:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:813467-813624:-1:exon

SIK3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 87175
gene: SIK3
product: SIK family kinase 3, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 2 ESTs, 1 Protein, and 99% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XM_030964869.1
SIO_010081: SIK3
subclass of: SO_0000673
so part of: SIK3
location: complement(join(813467..813624,813923..814090,814175..814307,815005..815168,818666..819537,819782..820121,820722..820831,821488..821573,821887..822012,822740..822890,828581..828651,829148..829303,830111..830264,830713..830822,830933..831013,831557..831700,831837..831947,832286..832404,833111..833234,833494..833618,838656..838817,844364..844427,845646..845762,880893..881014))
location: region:813467-881014:-1
so has part: feature:880893-881014:-1:exon
so has part: feature:845646-845762:-1:exon
so has part: feature:844364-844427:-1:exon
so has part: feature:838656-838817:-1:exon
so has part: feature:833494-833618:-1:exon
so has part: feature:833111-833234:-1:exon
so has part: feature:832286-832404:-1:exon
so has part: feature:831837-831947:-1:exon
so has part: feature:831557-831700:-1:exon
so has part: feature:830933-831013:-1:exon
so has part: feature:830713-830822:-1:exon
so has part: feature:830111-830264:-1:exon
so has part: feature:829148-829303:-1:exon
so has part: feature:828581-828651:-1:exon
so has part: feature:822740-822890:-1:exon
so has part: feature:821887-822012:-1:exon
so has part: feature:821488-821573:-1:exon
so has part: feature:820722-820831:-1:exon
so has part: feature:819782-820121:-1:exon
so has part: feature:818666-819537:-1:exon
so has part: feature:815005-815168:-1:exon
so has part: feature:814175-814307:-1:exon
so has part: feature:813923-814090:-1:exon
so has part: feature:813467-813624:-1:exon

position:881014:-1
position: 881014
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:880893-881014:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:845646-845762:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:844364-844427:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:838656-838817:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:833494-833618:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:833111-833234:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:832286-832404:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:831837-831947:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:831557-831700:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:830933-831013:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:830713-830822:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:830111-830264:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:829148-829303:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:828581-828651:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:822740-822890:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:821887-822012:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:821488-821573:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:820722-820831:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:819782-820121:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:818666-819537:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:815005-815168:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:814175-814307:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:813923-814090:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:813467-813624:-1:exon

SIK3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 87175
gene: SIK3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: serine/threonine-protein kinase SIK3 isoform X4
translation: MKMLCHPHIIRLYQVMETERMIYLVTEYASGGEIFDHLVAHGRMAEKEARRKFKQIVAAVNFCHCRNIVHRDLKAENLLLDANLNIKIADFGFSNIFTPGQLLKTWCGSPPYAAPELFEGKEYDGPKVDIWSLGVVLYVLVCGALPFDGSTLQNLRARVLSGKFRIPFFMSTECEHLIRHMLVLDPSKRLSMEQICKHKWMKLGEADAEFDRLIAECQHLKTERQLEPLNEDVLLAMADMGLDKERTVQSLRADAYDHYSAIYSLLCDRLKRHKNLRIAPSPSIPRTITFPTSANIQTEQTGNTMNINVPQVQLINPENQIVETDGTMNLDSDEGEEPSPEALVRYLSMRRHTVGVADPRTEVMEDLQKLLPGFPRVTPQAPFLQVTPNVNFMHNVLPRQNLQPTGQLEYKEQSLLQPPTLQLLNGMGPLGRRASDGGANIQLHAQQLLKRPRGPSPLVTMTPAVPAVTPVDEESSDGEPDQEAVQSSIYKDSNTLHLPTERFSPVRRFSDGAASIQAFKAHLEKMGNNSSIKQLQQECEQLQKMYGGHMDERTLEKTQQQHMLYQQEQHHQILHQQIQDCIRPPQPSPPLQAPCENQPALLTHQLQRLRIQPSSPPPNHPSNHLFRQPNSSPPPVSSSVLQPHGAASQSQFQGMPSHNTIFPQSGNCSPPPAMGLTCLALQQQQQQQSQQVTIQVQEPGDMVGSSLLPGASHARGMSLSPSASQIQMQHRANLMASLSYGHRQLSKQLSADSAESHSLNVNRYPPANYDQVHLHPHLFPEQPRVSPSNYSPPGGVGFPAAQQALKVPQLEQYPSFPPNAHQQQQQHYTASALQQALLSPTPPDYSRHQQVPHILQGLLSPRHSLTGHTDMRLPQAEFAQLIKRRQQQQQQQEYQELFRHMSQGDAGNMGASMGQNLSERQSLSLPYQSADTYHPQNSPQHLLKIRAQECIQQVPASVPPPQGYGHQPALFHSESMEEDCACEGNRDSFPDSKSSNTLTKGCHESPLLVNTGGHGDPESLLGTANPAQELATHQYRHQPAFRNKVPSRESIVGNCMDRSSPGQAMQVPDHNGLGYPVRPSSSEHPRPRSLQRHHTIQNSDDAYVQLDNLPGMSLMAGKALSSARMSDAVLSQSSLMASQQLRDRDGEECGEGLEGQEHANLGDGSQHLNASCYPSTCITDVLLSYKHPEVPFGMEQAGV
SIO_010081: SIK3
subclass of: SO_0000673
so part of: SIK3
location: complement(join(813933..814090,814175..814307,815005..815168,818666..819537,819782..820121,820722..820831,821488..821573,821887..822012,822740..822890,828581..828651,829148..829303,830111..830264,830713..830822,830933..831010,831557..831700,831837..831947,832286..832404,833111..833234,833494..833618,838656..838817,844364..844427,845646..845687))
location: region:813933-845687:-1
so has part: feature:845646-845687:-1:exon
so has part: feature:844364-844427:-1:exon
so has part: feature:838656-838817:-1:exon
so has part: feature:833494-833618:-1:exon
so has part: feature:833111-833234:-1:exon
so has part: feature:832286-832404:-1:exon
so has part: feature:831837-831947:-1:exon
so has part: feature:831557-831700:-1:exon
so has part: feature:830933-831010:-1:exon
so has part: feature:830713-830822:-1:exon
so has part: feature:830111-830264:-1:exon
so has part: feature:829148-829303:-1:exon
so has part: feature:828581-828651:-1:exon
so has part: feature:822740-822890:-1:exon
so has part: feature:821887-822012:-1:exon
so has part: feature:821488-821573:-1:exon
so has part: feature:820722-820831:-1:exon
so has part: feature:819782-820121:-1:exon
so has part: feature:818666-819537:-1:exon
so has part: feature:815005-815168:-1:exon
so has part: feature:814175-814307:-1:exon
so has part: feature:813933-814090:-1:exon

XP_030820733.1
type: Protein
SIO_000068: ncbiprotein

position:813933:-1
position: 813933
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:845687:-1
position: 845687
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:845646-845687:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:844364-844427:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:838656-838817:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:833494-833618:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:833111-833234:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:832286-832404:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:831837-831947:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:831557-831700:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:830933-831010:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:830713-830822:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:830111-830264:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:829148-829303:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:828581-828651:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:822740-822890:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:821887-822012:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:821488-821573:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:820722-820831:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:819782-820121:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:818666-819537:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:815005-815168:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:814175-814307:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:813933-814090:-1:exon

SIK3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 87175
gene: SIK3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: serine/threonine-protein kinase SIK3 isoform X3
translation: MKMLCHPHIIRLYQVMETERMIYLVTEYASGGEIFDHLVAHGRMAEKEARRKFKQIVAAVNFCHCRNIVHRDLKAENLLLDANLNIKIADFGFSNIFTPGQLLKTWCGSPPYAAPELFEGKEYDGPKVDIWSLGVVLYVLVCGALPFDGSTLQNLRARVLSGKFRIPFFMSTECEHLIRHMLVLDPSKRLSMEQICKHKWMKLGEADAEFDRLIAECQHLKTERQLEPLNEDVLLAMADMGLDKERTVQSLRADAYDHYSAIYSLLCDRLKRHKNLRIAPSPSIPRTITFPTSANIQTEQTGNTMNINVPQVQLINPENQIVETDGTMNLDSDEGEEPSPEALVRYLSMRRHTVGVADPRTEVMEDLQKLLPGFPRVTPQAPFLQVTPNVNFMHNVLPRQNLQPTGQLEYKEQSLLQPPTLQLLNGMGPLGRRASDGGANIQLHAQQLLKRPRGPSPLVTMTPAVPAVTPVDEESSDGEPDQEAVQRYLANRSKRHTLAMTNPTAEIPPDLQRQLGQQSFRPRAWAPHLGPDQHRSIYKDSNTLHLPTERFSPVRRFSDGAASIQAFKAHLEKMGNNSSIKQLQQECEQLQKMYGGHMDERTLEKTQQQHMLYQQEQHHQILHQQIQDCIRPPQPSPPLQAPCENQPALLTHQLQRLRIQPSSPPPNHPSNHLFRQPNSSPPPVSSSVLQPHGAASQSQFQGMPSHNTIFPQSGNCSPPPAMGLTCLALQQQQQQQSQQVTIQVQEPGDMVGSSLLPGASHARGMSLSPSASQIQMQHRANLMASLSYGHRQLSKQLSADSAESHSLNVNRYPPANYDQVHLHPHLFPEQPRVSPSNYSPPGGVGFPAAQQALKVPQLEQYPSFPPNAHQQQQQHYTASALQQALLSPTPPDYSRHQQVPHILQGLLSPRHSLTGHTDMRLPQAEFAQLIKRRQQQQQQQEYQELFRHMSQGDAGNMGASMGQNLSERQSLSLPYQSADTYHPQNSPQHLLKIRAQECIQQVPASVPPPQGYGHQPALFHSESMEEDCACEGNRDSFPDSKSSNTLTKGCHESPLLVNTGGHGDPESLLGTANPAQELATHQYRHQPAFRNKVPSRESIVGNCMDRSSPGQAMQVPDHNGLGYPVRPSSSEHPRPRSLQRHHTIQNSDDAYVQLDNLPGMSLMAGKALSSARMSDAVLSQSSLMASQQLRDRDGEECGEGLEGQEHANLGDGSQHLNASCYPSTCITDVLLSYKHPEVPFGMEQAGV
SIO_010081: SIK3
subclass of: SO_0000673
so part of: SIK3
location: complement(join(813933..814090,814175..814307,815005..815168,818666..819537,819782..820121,820722..820831,821488..821573,821887..822012,822740..822890,825518..825661,828581..828651,829148..829303,830111..830264,830713..830822,830933..831010,831557..831700,831837..831947,832286..832404,833111..833234,833494..833618,838656..838817,844364..844427,845646..845687))
location: region:813933-845687:-1
so has part: feature:845646-845687:-1:exon
so has part: feature:844364-844427:-1:exon
so has part: feature:838656-838817:-1:exon
so has part: feature:833494-833618:-1:exon
so has part: feature:833111-833234:-1:exon
so has part: feature:832286-832404:-1:exon
so has part: feature:831837-831947:-1:exon
so has part: feature:831557-831700:-1:exon
so has part: feature:830933-831010:-1:exon
so has part: feature:830713-830822:-1:exon
so has part: feature:830111-830264:-1:exon
so has part: feature:829148-829303:-1:exon
so has part: feature:828581-828651:-1:exon
so has part: feature:825518-825661:-1:exon
so has part: feature:822740-822890:-1:exon
so has part: feature:821887-822012:-1:exon
so has part: feature:821488-821573:-1:exon
so has part: feature:820722-820831:-1:exon
so has part: feature:819782-820121:-1:exon
so has part: feature:818666-819537:-1:exon
so has part: feature:815005-815168:-1:exon
so has part: feature:814175-814307:-1:exon
so has part: feature:813933-814090:-1:exon

XP_030820730.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:845646-845687:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:844364-844427:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:838656-838817:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:833494-833618:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:833111-833234:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:832286-832404:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:831837-831947:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:831557-831700:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:830933-831010:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:830713-830822:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:830111-830264:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:829148-829303:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:828581-828651:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:825518-825661:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:822740-822890:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:821887-822012:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:821488-821573:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:820722-820831:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:819782-820121:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:818666-819537:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:815005-815168:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:814175-814307:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:813933-814090:-1:exon

SIK3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 87175
gene: SIK3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: serine/threonine-protein kinase SIK3 isoform X2
translation: MKMLCHPHIIRLYQVMETERMIYLVTEYASGGEIFDHLVAHGRMAEKEARRKFKQIVAAVNFCHCRNIVHRDLKAENLLLDANLNIKIADFGFSNIFTPGQLLKTWCGSPPYAAPELFEGKEYDGPKVDIWSLGVVLYVLVCGALPFDGSTLQNLRARVLSGKFRIPFFMSTECEHLIRHMLVLDPSKRLSMEQICKHKWMKLGEADAEFDRLIAECQHLKTERQLEPLNEDVLLAMADMGLDKERTVQSLRADAYDHYSAIYSLLCDRLKRHKNLRIAPSPSIPRTITFPTSANIQQTEQTGNTMNINVPQVQLINPENQIVETDGTMNLDSDEGEEPSPEALVRYLSMRRHTVGVADPRTEVMEDLQKLLPGFPRVTPQAPFLQVTPNVNFMHNVLPRQNLQPTGQLEYKEQSLLQPPTLQLLNGMGPLGRRASDGGANIQLHAQQLLKRPRGPSPLVTMTPAVPAVTPVDEESSDGEPDQEAVQSSIYKDSNTLHLPTERFSPVRRFSDGAASIQAFKAHLEKMGNNSSIKQLQQECEQLQKMYGGHMDERTLEKTQQQHMLYQQEQHHQILHQQIQDCIRPPQPSPPLQAPCENQPALLTHQLQRLRIQPSSPPPNHPSNHLFRQPNSSPPPVSSSVLQPHGAASQSQFQGMPSHNTIFPQSGNCSPPPAMGLTCLALQQQQQQQSQQVTIQVQEPGDMVGSSLLPGASHARGMSLSPSASQIQMQHRANLMASLSYGHRQLSKQLSADSAESHSLNVNRYPPANYDQVHLHPHLFPEQPRVSPSNYSPPGGVGFPAAQQALKVPQLEQYPSFPPNAHQQQQQHYTASALQQALLSPTPPDYSRHQQVPHILQGLLSPRHSLTGHTDMRLPQAEFAQLIKRRQQQQQQQEYQELFRHMSQGDAGNMGASMGQNLSERQSLSLPYQSADTYHPQNSPQHLLKIRAQECIQQVPASVPPPQGYGHQPALFHSESMEEDCACEGNRDSFPDSKSSNTLTKGCHESPLLVNTGGHGDPESLLGTANPAQELATHQYRHQPAFRNKVPSRESIVGNCMDRSSPGQAMQVPDHNGLGYPVRPSSSEHPRPRSLQRHHTIQNSDDAYVQLDNLPGMSLMAGKALSSARMSDAVLSQSSLMASQQLRDRDGEECGEGLEGQEHANLGDGSQHLNASCYPSTCITDVLLSYKHPEVPFGMEQAGV
SIO_010081: SIK3
subclass of: SO_0000673
so part of: SIK3
location: complement(join(813933..814090,814175..814307,815005..815168,818666..819537,819782..820121,820722..820831,821488..821573,821887..822012,822740..822890,828581..828651,829148..829303,830111..830264,830713..830822,830933..831013,831557..831700,831837..831947,832286..832404,833111..833234,833494..833618,838656..838817,844364..844427,845646..845687))
location: region:813933-845687:-1
so has part: feature:845646-845687:-1:exon
so has part: feature:844364-844427:-1:exon
so has part: feature:838656-838817:-1:exon
so has part: feature:833494-833618:-1:exon
so has part: feature:833111-833234:-1:exon
so has part: feature:832286-832404:-1:exon
so has part: feature:831837-831947:-1:exon
so has part: feature:831557-831700:-1:exon
so has part: feature:830933-831013:-1:exon
so has part: feature:830713-830822:-1:exon
so has part: feature:830111-830264:-1:exon
so has part: feature:829148-829303:-1:exon
so has part: feature:828581-828651:-1:exon
so has part: feature:822740-822890:-1:exon
so has part: feature:821887-822012:-1:exon
so has part: feature:821488-821573:-1:exon
so has part: feature:820722-820831:-1:exon
so has part: feature:819782-820121:-1:exon
so has part: feature:818666-819537:-1:exon
so has part: feature:815005-815168:-1:exon
so has part: feature:814175-814307:-1:exon
so has part: feature:813933-814090:-1:exon

XP_030820729.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:845646-845687:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:844364-844427:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:838656-838817:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:833494-833618:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:833111-833234:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:832286-832404:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:831837-831947:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:831557-831700:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:830933-831013:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:830713-830822:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:830111-830264:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:829148-829303:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:828581-828651:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:822740-822890:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:821887-822012:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:821488-821573:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:820722-820831:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:819782-820121:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:818666-819537:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:815005-815168:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:814175-814307:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:813933-814090:-1:exon

SIK3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 87175
gene: SIK3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: serine/threonine-protein kinase SIK3 isoform X1
translation: MKMLCHPHIIRLYQVMETERMIYLVTEYASGGEIFDHLVAHGRMAEKEARRKFKQIVAAVNFCHCRNIVHRDLKAENLLLDANLNIKIADFGFSNIFTPGQLLKTWCGSPPYAAPELFEGKEYDGPKVDIWSLGVVLYVLVCGALPFDGSTLQNLRARVLSGKFRIPFFMSTECEHLIRHMLVLDPSKRLSMEQICKHKWMKLGEADAEFDRLIAECQHLKTERQLEPLNEDVLLAMADMGLDKERTVQSLRADAYDHYSAIYSLLCDRLKRHKNLRIAPSPSIPRTITFPTSANIQQTEQTGNTMNINVPQVQLINPENQIVETDGTMNLDSDEGEEPSPEALVRYLSMRRHTVGVADPRTEVMEDLQKLLPGFPRVTPQAPFLQVTPNVNFMHNVLPRQNLQPTGQLEYKEQSLLQPPTLQLLNGMGPLGRRASDGGANIQLHAQQLLKRPRGPSPLVTMTPAVPAVTPVDEESSDGEPDQEAVQRYLANRSKRHTLAMTNPTAEIPPDLQRQLGQQSFRPRAWAPHLGPDQHRSIYKDSNTLHLPTERFSPVRRFSDGAASIQAFKAHLEKMGNNSSIKQLQQECEQLQKMYGGHMDERTLEKTQQQHMLYQQEQHHQILHQQIQDCIRPPQPSPPLQAPCENQPALLTHQLQRLRIQPSSPPPNHPSNHLFRQPNSSPPPVSSSVLQPHGAASQSQFQGMPSHNTIFPQSGNCSPPPAMGLTCLALQQQQQQQSQQVTIQVQEPGDMVGSSLLPGASHARGMSLSPSASQIQMQHRANLMASLSYGHRQLSKQLSADSAESHSLNVNRYPPANYDQVHLHPHLFPEQPRVSPSNYSPPGGVGFPAAQQALKVPQLEQYPSFPPNAHQQQQQHYTASALQQALLSPTPPDYSRHQQVPHILQGLLSPRHSLTGHTDMRLPQAEFAQLIKRRQQQQQQQEYQELFRHMSQGDAGNMGASMGQNLSERQSLSLPYQSADTYHPQNSPQHLLKIRAQECIQQVPASVPPPQGYGHQPALFHSESMEEDCACEGNRDSFPDSKSSNTLTKGCHESPLLVNTGGHGDPESLLGTANPAQELATHQYRHQPAFRNKVPSRESIVGNCMDRSSPGQAMQVPDHNGLGYPVRPSSSEHPRPRSLQRHHTIQNSDDAYVQLDNLPGMSLMAGKALSSARMSDAVLSQSSLMASQQLRDRDGEECGEGLEGQEHANLGDGSQHLNASCYPSTCITDVLLSYKHPEVPFGMEQAGV
SIO_010081: SIK3
subclass of: SO_0000673
so part of: SIK3
location: complement(join(813933..814090,814175..814307,815005..815168,818666..819537,819782..820121,820722..820831,821488..821573,821887..822012,822740..822890,825518..825661,828581..828651,829148..829303,830111..830264,830713..830822,830933..831013,831557..831700,831837..831947,832286..832404,833111..833234,833494..833618,838656..838817,844364..844427,845646..845687))
location: region:813933-845687:-1
so has part: feature:845646-845687:-1:exon
so has part: feature:844364-844427:-1:exon
so has part: feature:838656-838817:-1:exon
so has part: feature:833494-833618:-1:exon
so has part: feature:833111-833234:-1:exon
so has part: feature:832286-832404:-1:exon
so has part: feature:831837-831947:-1:exon
so has part: feature:831557-831700:-1:exon
so has part: feature:830933-831013:-1:exon
so has part: feature:830713-830822:-1:exon
so has part: feature:830111-830264:-1:exon
so has part: feature:829148-829303:-1:exon
so has part: feature:828581-828651:-1:exon
so has part: feature:825518-825661:-1:exon
so has part: feature:822740-822890:-1:exon
so has part: feature:821887-822012:-1:exon
so has part: feature:821488-821573:-1:exon
so has part: feature:820722-820831:-1:exon
so has part: feature:819782-820121:-1:exon
so has part: feature:818666-819537:-1:exon
so has part: feature:815005-815168:-1:exon
so has part: feature:814175-814307:-1:exon
so has part: feature:813933-814090:-1:exon

XP_030820728.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:845646-845687:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:844364-844427:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:838656-838817:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:833494-833618:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:833111-833234:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:832286-832404:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:831837-831947:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:831557-831700:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:830933-831013:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:830713-830822:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:830111-830264:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:829148-829303:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:828581-828651:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:825518-825661:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:822740-822890:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:821887-822012:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:821488-821573:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:820722-820831:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:819782-820121:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:818666-819537:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:815005-815168:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:814175-814307:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:813933-814090:-1:exon

PAFAH1B2
type: Gene
subclass of: SO_0000704
RO_0002162: 87175
gene: PAFAH1B2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 881923..889174
location: region:881923-889174:1
so has part: feature:881923-889174:1:exon
subclass of: SO_0000010

115913091
type: Gene
SIO_000068: ncbigene

position:881923:1
position: 881923
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:889174:1
position: 889174
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:881923-889174:1:exon

PAFAH1B2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 87175
gene: PAFAH1B2
product: platelet activating factor acetylhydrolase 1b catalytic subunit 2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 35 ESTs, 16 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
transcript id: XM_030964965.1
SIO_010081: PAFAH1B2
subclass of: SO_0000673
so part of: PAFAH1B2
location: join(881923..882000,883047..883134,883626..883715,884533..884649,884887..885009,885556..889174)
location: region:881923-889174:1
so has part: feature:881923-882000:1:exon
so has part: feature:883047-883134:1:exon
so has part: feature:883626-883715:1:exon
so has part: feature:884533-884649:1:exon
so has part: feature:884887-885009:1:exon
so has part: feature:885556-889174:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:881923-882000:1:exon

position:882000:1
position: 882000
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:883047-883134:1:exon

position:883047:1
position: 883047
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:883134:1
position: 883134
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:883626-883715:1:exon

position:883626:1
position: 883626
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:883715:1
position: 883715
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:884533-884649:1:exon

position:884533:1
position: 884533
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:884649:1
position: 884649
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:884887-885009:1:exon

position:884887:1
position: 884887
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:885009:1
position: 885009
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:885556-889174:1:exon

position:885556:1
position: 885556
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

PAFAH1B2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 87175
gene: PAFAH1B2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: platelet-activating factor acetylhydrolase IB subunit beta
translation: MESRGKEPQPPNRMGMGDSNPAAVPHAAEDIQGDDRWMSQHNRFVLDCKDKEPDVLFVGDSMVQLLQQYEIWRELFSPLHALNFGIGGDTTGHVLWRLKNGELENIKPKVIVVWVGTNNHENTAEEVAGGIEAIVRLINTQQPQAKVIVLGLLPRGEKPNPLRQKNAKVNHLLKASLPKLPNVQLLDVDVGFVHSDGTISYHDMFDFLHLTGGGYAKVCKPLHELIMQLLEETPEEKRAALA
SIO_010081: PAFAH1B2
subclass of: SO_0000673
so part of: PAFAH1B2
location: join(881969..882000,883047..883134,883626..883715,884533..884649,884887..885009,885556..885834)
location: region:881969-885834:1
so has part: feature:881969-882000:1:exon
so has part: feature:883047-883134:1:exon
so has part: feature:883626-883715:1:exon
so has part: feature:884533-884649:1:exon
so has part: feature:884887-885009:1:exon
so has part: feature:885556-885834:1:exon

XP_030820825.1
type: Protein
SIO_000068: ncbiprotein

position:881969:1
position: 881969
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:885834:1
position: 885834
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:881969-882000:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:883047-883134:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:883626-883715:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:884533-884649:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:884887-885009:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:885556-885834:1:exon

SIDT2
type: Gene
subclass of: SO_0000704
RO_0002162: 87175
gene: SIDT2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 890357..897263
location: region:890357-897263:1
so has part: feature:890357-897263:1:exon
subclass of: SO_0000010

115913001
type: Gene
SIO_000068: ncbigene

position:890357:1
position: 890357
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:897263:1
position: 897263
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:890357-897263:1:exon

SIDT2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 87175
gene: SIDT2
product: SID1 transmembrane family member 2, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 9 Proteins, and 97% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
transcript id: XM_030964836.1
SIO_010081: SIDT2
subclass of: SO_0000673
so part of: SIDT2
location: join(890357..890817,890988..891109,891264..891425,891534..891579,891670..891771,891849..891932,892076..892187,892277..892342,892447..892540,892635..892690,892937..892948,893088..893159,893247..893321,893969..894090,894161..894234,894327..894393,894529..894602,894722..894845,894944..895061,895135..895271,895348..895608,895700..895746,896031..896136,896234..896344,896427..896540,896623..897263)
location: region:890357-897263:1
so has part: feature:890357-890817:1:exon
so has part: feature:890988-891109:1:exon
so has part: feature:891264-891425:1:exon
so has part: feature:891534-891579:1:exon
so has part: feature:891670-891771:1:exon
so has part: feature:891849-891932:1:exon
so has part: feature:892076-892187:1:exon
so has part: feature:892277-892342:1:exon
so has part: feature:892447-892540:1:exon
so has part: feature:892635-892690:1:exon
so has part: feature:892937-892948:1:exon
so has part: feature:893088-893159:1:exon
so has part: feature:893247-893321:1:exon
so has part: feature:893969-894090:1:exon
so has part: feature:894161-894234:1:exon
so has part: feature:894327-894393:1:exon
so has part: feature:894529-894602:1:exon
so has part: feature:894722-894845:1:exon
so has part: feature:894944-895061:1:exon
so has part: feature:895135-895271:1:exon
so has part: feature:895348-895608:1:exon
so has part: feature:895700-895746:1:exon
so has part: feature:896031-896136:1:exon
so has part: feature:896234-896344:1:exon
so has part: feature:896427-896540:1:exon
so has part: feature:896623-897263:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:890357-890817:1:exon

position:890817:1
position: 890817
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:890988-891109:1:exon

position:890988:1
position: 890988
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:891109:1
position: 891109
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:891264-891425:1:exon

position:891264:1
position: 891264
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:891425:1
position: 891425
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:891534-891579:1:exon

position:891534:1
position: 891534
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:891579:1
position: 891579
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:891670-891771:1:exon

position:891670:1
position: 891670
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:891771:1
position: 891771
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:891849-891932:1:exon

position:891849:1
position: 891849
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:891932:1
position: 891932
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:892076-892187:1:exon

position:892076:1
position: 892076
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:892187:1
position: 892187
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:892277-892342:1:exon

position:892277:1
position: 892277
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:892342:1
position: 892342
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:892447-892540:1:exon

position:892447:1
position: 892447
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:892540:1
position: 892540
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:892635-892690:1:exon

position:892635:1
position: 892635
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:892690:1
position: 892690
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:892937-892948:1:exon

position:892937:1
position: 892937
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:892948:1
position: 892948
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:893088-893159:1:exon

position:893088:1
position: 893088
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:893159:1
position: 893159
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:893247-893321:1:exon

position:893247:1
position: 893247
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:893321:1
position: 893321
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:893969-894090:1:exon

position:893969:1
position: 893969
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:894090:1
position: 894090
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:894161-894234:1:exon

position:894161:1
position: 894161
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:894234:1
position: 894234
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:894327-894393:1:exon

position:894327:1
position: 894327
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:894393:1
position: 894393
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:894529-894602:1:exon

position:894529:1
position: 894529
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:894602:1
position: 894602
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:894722-894845:1:exon

position:894722:1
position: 894722
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:894845:1
position: 894845
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:894944-895061:1:exon

position:894944:1
position: 894944
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:895061:1
position: 895061
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:895135-895271:1:exon

position:895135:1
position: 895135
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:895271:1
position: 895271
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:895348-895608:1:exon

position:895348:1
position: 895348
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:895608:1
position: 895608
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 22
SIO_000628: feature:895700-895746:1:exon

position:895700:1
position: 895700
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:895746:1
position: 895746
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 23
SIO_000628: feature:896031-896136:1:exon

position:896031:1
position: 896031
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:896136:1
position: 896136
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 24
SIO_000628: feature:896234-896344:1:exon

position:896234:1
position: 896234
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:896344:1
position: 896344
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 25
SIO_000628: feature:896427-896540:1:exon

position:896427:1
position: 896427
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:896540:1
position: 896540
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 26
SIO_000628: feature:896623-897263:1:exon

position:896623:1
position: 896623
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

SIDT2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 87175
gene: SIDT2
product: SID1 transmembrane family member 2, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 9 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
transcript id: XM_030964838.1
SIO_010081: SIDT2
subclass of: SO_0000673
so part of: SIDT2
location: join(890357..890817,890988..891109,891264..891425,891534..891579,891670..891771,891849..891932,892076..892187,892277..892342,892447..892540,892635..892690,892937..892948,893088..893159,893247..893321,893969..894090,894161..894234,894327..894393,894529..894602,894722..894845,894944..895061,895135..895271,895348..895456,895532..895608,895700..895746,896031..896136,896234..896344,896427..896540,896623..897263)
location: region:890357-897263:1
so has part: feature:890357-890817:1:exon
so has part: feature:890988-891109:1:exon
so has part: feature:891264-891425:1:exon
so has part: feature:891534-891579:1:exon
so has part: feature:891670-891771:1:exon
so has part: feature:891849-891932:1:exon
so has part: feature:892076-892187:1:exon
so has part: feature:892277-892342:1:exon
so has part: feature:892447-892540:1:exon
so has part: feature:892635-892690:1:exon
so has part: feature:892937-892948:1:exon
so has part: feature:893088-893159:1:exon
so has part: feature:893247-893321:1:exon
so has part: feature:893969-894090:1:exon
so has part: feature:894161-894234:1:exon
so has part: feature:894327-894393:1:exon
so has part: feature:894529-894602:1:exon
so has part: feature:894722-894845:1:exon
so has part: feature:894944-895061:1:exon
so has part: feature:895135-895271:1:exon
so has part: feature:895348-895456:1:exon
so has part: feature:895532-895608:1:exon
so has part: feature:895700-895746:1:exon
so has part: feature:896031-896136:1:exon
so has part: feature:896234-896344:1:exon
so has part: feature:896427-896540:1:exon
so has part: feature:896623-897263:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:890357-890817:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:890988-891109:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:891264-891425:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:891534-891579:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:891670-891771:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:891849-891932:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:892076-892187:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:892277-892342:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:892447-892540:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:892635-892690:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:892937-892948:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:893088-893159:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:893247-893321:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:893969-894090:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:894161-894234:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:894327-894393:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:894529-894602:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:894722-894845:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:894944-895061:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:895135-895271:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:895348-895456:1:exon

position:895456:1
position: 895456
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 22
SIO_000628: feature:895532-895608:1:exon

position:895532:1
position: 895532
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 23
SIO_000628: feature:895700-895746:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:896031-896136:1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:896234-896344:1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:896427-896540:1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:896623-897263:1:exon

SIDT2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 87175
gene: SIDT2
product: SID1 transmembrane family member 2, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 9 Proteins, and 97% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
transcript id: XM_030964837.1
SIO_010081: SIDT2
subclass of: SO_0000673
so part of: SIDT2
location: join(890357..890817,890988..891109,891264..891425,891534..891579,891670..891771,891849..891932,892076..892187,892277..892342,892447..892540,892635..892690,893088..893159,893247..893321,893969..894090,894161..894234,894327..894393,894529..894602,894722..894845,894944..895061,895135..895271,895348..895608,895700..895746,896031..896136,896234..896344,896427..896540,896623..897263)
location: region:890357-897263:1
so has part: feature:890357-890817:1:exon
so has part: feature:890988-891109:1:exon
so has part: feature:891264-891425:1:exon
so has part: feature:891534-891579:1:exon
so has part: feature:891670-891771:1:exon
so has part: feature:891849-891932:1:exon
so has part: feature:892076-892187:1:exon
so has part: feature:892277-892342:1:exon
so has part: feature:892447-892540:1:exon
so has part: feature:892635-892690:1:exon
so has part: feature:893088-893159:1:exon
so has part: feature:893247-893321:1:exon
so has part: feature:893969-894090:1:exon
so has part: feature:894161-894234:1:exon
so has part: feature:894327-894393:1:exon
so has part: feature:894529-894602:1:exon
so has part: feature:894722-894845:1:exon
so has part: feature:894944-895061:1:exon
so has part: feature:895135-895271:1:exon
so has part: feature:895348-895608:1:exon
so has part: feature:895700-895746:1:exon
so has part: feature:896031-896136:1:exon
so has part: feature:896234-896344:1:exon
so has part: feature:896427-896540:1:exon
so has part: feature:896623-897263:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:890357-890817:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:890988-891109:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:891264-891425:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:891534-891579:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:891670-891771:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:891849-891932:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:892076-892187:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:892277-892342:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:892447-892540:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:892635-892690:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:893088-893159:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:893247-893321:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:893969-894090:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:894161-894234:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:894327-894393:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:894529-894602:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:894722-894845:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:894944-895061:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:895135-895271:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:895348-895608:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:895700-895746:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:896031-896136:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:896234-896344:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:896427-896540:1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:896623-897263:1:exon

SIDT2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 87175
gene: SIDT2
product: SID1 transmembrane family member 2, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 12 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
transcript id: XM_030964839.1
SIO_010081: SIDT2
subclass of: SO_0000673
so part of: SIDT2
location: join(890357..890817,890988..891109,891264..891425,891534..891579,891670..891771,891849..891932,892076..892187,892277..892342,892447..892540,892635..892690,893088..893159,893247..893321,893969..894090,894161..894234,894327..894393,894529..894602,894722..894845,894944..895061,895135..895271,895348..895456,895532..895608,895700..895746,896031..896136,896234..896344,896427..896540,896623..897263)
location: region:890357-897263:1
so has part: feature:890357-890817:1:exon
so has part: feature:890988-891109:1:exon
so has part: feature:891264-891425:1:exon
so has part: feature:891534-891579:1:exon
so has part: feature:891670-891771:1:exon
so has part: feature:891849-891932:1:exon
so has part: feature:892076-892187:1:exon
so has part: feature:892277-892342:1:exon
so has part: feature:892447-892540:1:exon
so has part: feature:892635-892690:1:exon
so has part: feature:893088-893159:1:exon
so has part: feature:893247-893321:1:exon
so has part: feature:893969-894090:1:exon
so has part: feature:894161-894234:1:exon
so has part: feature:894327-894393:1:exon
so has part: feature:894529-894602:1:exon
so has part: feature:894722-894845:1:exon
so has part: feature:894944-895061:1:exon
so has part: feature:895135-895271:1:exon
so has part: feature:895348-895456:1:exon
so has part: feature:895532-895608:1:exon
so has part: feature:895700-895746:1:exon
so has part: feature:896031-896136:1:exon
so has part: feature:896234-896344:1:exon
so has part: feature:896427-896540:1:exon
so has part: feature:896623-897263:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:890357-890817:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:890988-891109:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:891264-891425:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:891534-891579:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:891670-891771:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:891849-891932:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:892076-892187:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:892277-892342:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:892447-892540:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:892635-892690:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:893088-893159:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:893247-893321:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:893969-894090:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:894161-894234:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:894327-894393:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:894529-894602:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:894722-894845:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:894944-895061:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:895135-895271:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:895348-895456:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:895532-895608:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:895700-895746:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:896031-896136:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:896234-896344:1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:896427-896540:1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:896623-897263:1:exon

SIDT2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 87175
gene: SIDT2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: SID1 transmembrane family member 2 isoform X1
translation: MSGAGAAVLAWALLAGALLPPPPVRPQPLPHGDSEVHEKEAQFNTTYSDWVHANLLNIYAFNHSVRRNRTEGVRVSVHVLSDQKDQPVLFVVRQKEAVVSFQVPLILRGLYQRKYAYQEVSRTLCQPQTKAEVETQHFYVDVSTLSLNTSYQLRVTRVENFVLRTNERFSFNATAAQPQYFKYEFPEEVDSVIVKVTSAMAFPCSVISIQDILCPVYDLDNNVAFIGMYQTMTKKAAITVQKKDFPSHSFYVVVVVKTEDEACGGALPYYPLSKNASPDEPVDQHNRQKTLEVMVSPAITSEAYVRSVLFCLGIFLSFYILTLLIACWESCRQHKRKGLLAAMDSPSLDTASLLGHSRSIPDSFLNHGPYDSYGYGSFGNGSSSSTEGITDSLGSAEVSYSYVGERSLENVASRPRLDSLSSVEEDDYDTLADIDYDKNVIRTKQYLCVADLARKDKRVLRKKYQIYFWNIATIAVFYALPVIQLVITYQTVVNVTGNQDICYYNFLCAHPLGNLSAFNNILSNLGYVLLGLLFLLIILQREINYNRALLRNDAHALECGIPKHFGLFYAMGTALMMEGLLSACYHVCPNYTNFQFDTSFMYMIAGLCMLKLYQKRHPDINASAYSAYACLALVIFFSVVGVVFGKGNTAFWIVFSVIHIVATLLLSTQLYYMGRWKLGEGGTRSEVGGDSGWPPRVTSPLPTDSGILRRILHVLYTDCVRQCSGPMYVDRMVLLVMGNIINWSLAAYGLIVRPNDFASYLLAIGICNLLLYFAFYIIMKLRSGERIKLIPLLCIISTSVVWGFALFFFFQGLSTWQKTPAESREHNRDCILLDFFDDHDIWHFLSSIAMFGSFLVLLTLDDDLDCVQRDKIYVF
SIO_010081: SIDT2
subclass of: SO_0000673
so part of: SIDT2
location: join(890611..890817,890988..891109,891264..891425,891534..891579,891670..891771,891849..891932,892076..892187,892277..892342,892447..892540,892635..892690,892937..892948,893088..893159,893247..893321,893969..894090,894161..894234,894327..894393,894529..894602,894722..894845,894944..895061,895135..895271,895348..895608,895700..895746,896031..896136,896234..896344,896427..896540,896623..896685)
location: region:890611-896685:1
so has part: feature:890611-890817:1:exon
so has part: feature:890988-891109:1:exon
so has part: feature:891264-891425:1:exon
so has part: feature:891534-891579:1:exon
so has part: feature:891670-891771:1:exon
so has part: feature:891849-891932:1:exon
so has part: feature:892076-892187:1:exon
so has part: feature:892277-892342:1:exon
so has part: feature:892447-892540:1:exon
so has part: feature:892635-892690:1:exon
so has part: feature:892937-892948:1:exon
so has part: feature:893088-893159:1:exon
so has part: feature:893247-893321:1:exon
so has part: feature:893969-894090:1:exon
so has part: feature:894161-894234:1:exon
so has part: feature:894327-894393:1:exon
so has part: feature:894529-894602:1:exon
so has part: feature:894722-894845:1:exon
so has part: feature:894944-895061:1:exon
so has part: feature:895135-895271:1:exon
so has part: feature:895348-895608:1:exon
so has part: feature:895700-895746:1:exon
so has part: feature:896031-896136:1:exon
so has part: feature:896234-896344:1:exon
so has part: feature:896427-896540:1:exon
so has part: feature:896623-896685:1:exon

XP_030820696.1
type: Protein
SIO_000068: ncbiprotein

position:890611:1
position: 890611
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:896685:1
position: 896685
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:890611-890817:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:890988-891109:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:891264-891425:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:891534-891579:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:891670-891771:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:891849-891932:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:892076-892187:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:892277-892342:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:892447-892540:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:892635-892690:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:892937-892948:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:893088-893159:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:893247-893321:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:893969-894090:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:894161-894234:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:894327-894393:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:894529-894602:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:894722-894845:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:894944-895061:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:895135-895271:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:895348-895608:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:895700-895746:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:896031-896136:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:896234-896344:1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:896427-896540:1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:896623-896685:1:exon

SIDT2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 87175
gene: SIDT2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: SID1 transmembrane family member 2 isoform X3
translation: MSGAGAAVLAWALLAGALLPPPPVRPQPLPHGDSEVHEKEAQFNTTYSDWVHANLLNIYAFNHSVRRNRTEGVRVSVHVLSDQKDQPVLFVVRQKEAVVSFQVPLILRGLYQRKYAYQEVSRTLCQPQTKAEVETQHFYVDVSTLSLNTSYQLRVTRVENFVLRTNERFSFNATAAQPQYFKYEFPEEVDSVIVKVTSAMAFPCSVISIQDILCPVYDLDNNVAFIGMYQTMTKKAAITVQKKDFPSHSFYVVVVVKTEDEACGGALPYYPLSKNASPDEPVDQHNRQKTLEVMVSPAITSEAYVRSVLFCLGIFLSFYILTLLIACWESCRQHKRKGLLAAMDSPSLDTASLLGHSRSIPDSFLNHGPYDSYGYGSFGNGSSSSTEGITDSLGSAEVSYSYVGERSLENVASRPRLDSLSSVEEDDYDTLADIDYDKNVIRTKQYLCVADLARKDKRVLRKKYQIYFWNIATIAVFYALPVIQLVITYQTVVNVTGNQDICYYNFLCAHPLGNLSAFNNILSNLGYVLLGLLFLLIILQREINYNRALLRNDAHALECGIPKHFGLFYAMGTALMMEGLLSACYHVCPNYTNFQFDTSFMYMIAGLCMLKLYQKRHPDINASAYSAYACLALVIFFSVVGVVFGKGNTAFWIVFSVIHIVATLLLSTQLYYMGRWKLDSGILRRILHVLYTDCVRQCSGPMYVDRMVLLVMGNIINWSLAAYGLIVRPNDFASYLLAIGICNLLLYFAFYIIMKLRSGERIKLIPLLCIISTSVVWGFALFFFFQGLSTWQKTPAESREHNRDCILLDFFDDHDIWHFLSSIAMFGSFLVLLTLDDDLDCVQRDKIYVF
SIO_010081: SIDT2
subclass of: SO_0000673
so part of: SIDT2
location: join(890611..890817,890988..891109,891264..891425,891534..891579,891670..891771,891849..891932,892076..892187,892277..892342,892447..892540,892635..892690,892937..892948,893088..893159,893247..893321,893969..894090,894161..894234,894327..894393,894529..894602,894722..894845,894944..895061,895135..895271,895348..895456,895532..895608,895700..895746,896031..896136,896234..896344,896427..896540,896623..896685)
location: region:890611-896685:1
so has part: feature:890611-890817:1:exon
so has part: feature:890988-891109:1:exon
so has part: feature:891264-891425:1:exon
so has part: feature:891534-891579:1:exon
so has part: feature:891670-891771:1:exon
so has part: feature:891849-891932:1:exon
so has part: feature:892076-892187:1:exon
so has part: feature:892277-892342:1:exon
so has part: feature:892447-892540:1:exon
so has part: feature:892635-892690:1:exon
so has part: feature:892937-892948:1:exon
so has part: feature:893088-893159:1:exon
so has part: feature:893247-893321:1:exon
so has part: feature:893969-894090:1:exon
so has part: feature:894161-894234:1:exon
so has part: feature:894327-894393:1:exon
so has part: feature:894529-894602:1:exon
so has part: feature:894722-894845:1:exon
so has part: feature:894944-895061:1:exon
so has part: feature:895135-895271:1:exon
so has part: feature:895348-895456:1:exon
so has part: feature:895532-895608:1:exon
so has part: feature:895700-895746:1:exon
so has part: feature:896031-896136:1:exon
so has part: feature:896234-896344:1:exon
so has part: feature:896427-896540:1:exon
so has part: feature:896623-896685:1:exon

XP_030820698.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:890611-890817:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:890988-891109:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:891264-891425:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:891534-891579:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:891670-891771:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:891849-891932:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:892076-892187:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:892277-892342:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:892447-892540:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:892635-892690:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:892937-892948:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:893088-893159:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:893247-893321:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:893969-894090:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:894161-894234:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:894327-894393:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:894529-894602:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:894722-894845:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:894944-895061:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:895135-895271:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:895348-895456:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:895532-895608:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:895700-895746:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:896031-896136:1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:896234-896344:1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:896427-896540:1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:896623-896685:1:exon

SIDT2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 87175
gene: SIDT2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: SID1 transmembrane family member 2 isoform X2
translation: MSGAGAAVLAWALLAGALLPPPPVRPQPLPHGDSEVHEKEAQFNTTYSDWVHANLLNIYAFNHSVRRNRTEGVRVSVHVLSDQKDQPVLFVVRQKEAVVSFQVPLILRGLYQRKYAYQEVSRTLCQPQTKAEVETQHFYVDVSTLSLNTSYQLRVTRVENFVLRTNERFSFNATAAQPQYFKYEFPEEVDSVIVKVTSAMAFPCSVISIQDILCPVYDLDNNVAFIGMYQTMTKKAAITVQKKDFPSHSFYVVVVVKTEDEACGGALPYYPLSKNASPDEPVDQHNRQKTLEVMVSPAITSEAYVRSVLFCLGIFLSFYILTLLIACWESCRQHKRKGLLAAMDSPSLDTGHSRSIPDSFLNHGPYDSYGYGSFGNGSSSSTEGITDSLGSAEVSYSYVGERSLENVASRPRLDSLSSVEEDDYDTLADIDYDKNVIRTKQYLCVADLARKDKRVLRKKYQIYFWNIATIAVFYALPVIQLVITYQTVVNVTGNQDICYYNFLCAHPLGNLSAFNNILSNLGYVLLGLLFLLIILQREINYNRALLRNDAHALECGIPKHFGLFYAMGTALMMEGLLSACYHVCPNYTNFQFDTSFMYMIAGLCMLKLYQKRHPDINASAYSAYACLALVIFFSVVGVVFGKGNTAFWIVFSVIHIVATLLLSTQLYYMGRWKLGEGGTRSEVGGDSGWPPRVTSPLPTDSGILRRILHVLYTDCVRQCSGPMYVDRMVLLVMGNIINWSLAAYGLIVRPNDFASYLLAIGICNLLLYFAFYIIMKLRSGERIKLIPLLCIISTSVVWGFALFFFFQGLSTWQKTPAESREHNRDCILLDFFDDHDIWHFLSSIAMFGSFLVLLTLDDDLDCVQRDKIYVF
SIO_010081: SIDT2
subclass of: SO_0000673
so part of: SIDT2
location: join(890611..890817,890988..891109,891264..891425,891534..891579,891670..891771,891849..891932,892076..892187,892277..892342,892447..892540,892635..892690,893088..893159,893247..893321,893969..894090,894161..894234,894327..894393,894529..894602,894722..894845,894944..895061,895135..895271,895348..895608,895700..895746,896031..896136,896234..896344,896427..896540,896623..896685)
location: region:890611-896685:1
so has part: feature:890611-890817:1:exon
so has part: feature:890988-891109:1:exon
so has part: feature:891264-891425:1:exon
so has part: feature:891534-891579:1:exon
so has part: feature:891670-891771:1:exon
so has part: feature:891849-891932:1:exon
so has part: feature:892076-892187:1:exon
so has part: feature:892277-892342:1:exon
so has part: feature:892447-892540:1:exon
so has part: feature:892635-892690:1:exon
so has part: feature:893088-893159:1:exon
so has part: feature:893247-893321:1:exon
so has part: feature:893969-894090:1:exon
so has part: feature:894161-894234:1:exon
so has part: feature:894327-894393:1:exon
so has part: feature:894529-894602:1:exon
so has part: feature:894722-894845:1:exon
so has part: feature:894944-895061:1:exon
so has part: feature:895135-895271:1:exon
so has part: feature:895348-895608:1:exon
so has part: feature:895700-895746:1:exon
so has part: feature:896031-896136:1:exon
so has part: feature:896234-896344:1:exon
so has part: feature:896427-896540:1:exon
so has part: feature:896623-896685:1:exon

XP_030820697.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:890611-890817:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:890988-891109:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:891264-891425:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:891534-891579:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:891670-891771:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:891849-891932:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:892076-892187:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:892277-892342:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:892447-892540:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:892635-892690:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:893088-893159:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:893247-893321:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:893969-894090:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:894161-894234:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:894327-894393:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:894529-894602:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:894722-894845:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:894944-895061:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:895135-895271:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:895348-895608:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:895700-895746:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:896031-896136:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:896234-896344:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:896427-896540:1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:896623-896685:1:exon

SIDT2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 87175
gene: SIDT2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: SID1 transmembrane family member 2 isoform X4
translation: MSGAGAAVLAWALLAGALLPPPPVRPQPLPHGDSEVHEKEAQFNTTYSDWVHANLLNIYAFNHSVRRNRTEGVRVSVHVLSDQKDQPVLFVVRQKEAVVSFQVPLILRGLYQRKYAYQEVSRTLCQPQTKAEVETQHFYVDVSTLSLNTSYQLRVTRVENFVLRTNERFSFNATAAQPQYFKYEFPEEVDSVIVKVTSAMAFPCSVISIQDILCPVYDLDNNVAFIGMYQTMTKKAAITVQKKDFPSHSFYVVVVVKTEDEACGGALPYYPLSKNASPDEPVDQHNRQKTLEVMVSPAITSEAYVRSVLFCLGIFLSFYILTLLIACWESCRQHKRKGLLAAMDSPSLDTGHSRSIPDSFLNHGPYDSYGYGSFGNGSSSSTEGITDSLGSAEVSYSYVGERSLENVASRPRLDSLSSVEEDDYDTLADIDYDKNVIRTKQYLCVADLARKDKRVLRKKYQIYFWNIATIAVFYALPVIQLVITYQTVVNVTGNQDICYYNFLCAHPLGNLSAFNNILSNLGYVLLGLLFLLIILQREINYNRALLRNDAHALECGIPKHFGLFYAMGTALMMEGLLSACYHVCPNYTNFQFDTSFMYMIAGLCMLKLYQKRHPDINASAYSAYACLALVIFFSVVGVVFGKGNTAFWIVFSVIHIVATLLLSTQLYYMGRWKLDSGILRRILHVLYTDCVRQCSGPMYVDRMVLLVMGNIINWSLAAYGLIVRPNDFASYLLAIGICNLLLYFAFYIIMKLRSGERIKLIPLLCIISTSVVWGFALFFFFQGLSTWQKTPAESREHNRDCILLDFFDDHDIWHFLSSIAMFGSFLVLLTLDDDLDCVQRDKIYVF
SIO_010081: SIDT2
subclass of: SO_0000673
so part of: SIDT2
location: join(890611..890817,890988..891109,891264..891425,891534..891579,891670..891771,891849..891932,892076..892187,892277..892342,892447..892540,892635..892690,893088..893159,893247..893321,893969..894090,894161..894234,894327..894393,894529..894602,894722..894845,894944..895061,895135..895271,895348..895456,895532..895608,895700..895746,896031..896136,896234..896344,896427..896540,896623..896685)
location: region:890611-896685:1
so has part: feature:890611-890817:1:exon
so has part: feature:890988-891109:1:exon
so has part: feature:891264-891425:1:exon
so has part: feature:891534-891579:1:exon
so has part: feature:891670-891771:1:exon
so has part: feature:891849-891932:1:exon
so has part: feature:892076-892187:1:exon
so has part: feature:892277-892342:1:exon
so has part: feature:892447-892540:1:exon
so has part: feature:892635-892690:1:exon
so has part: feature:893088-893159:1:exon
so has part: feature:893247-893321:1:exon
so has part: feature:893969-894090:1:exon
so has part: feature:894161-894234:1:exon
so has part: feature:894327-894393:1:exon
so has part: feature:894529-894602:1:exon
so has part: feature:894722-894845:1:exon
so has part: feature:894944-895061:1:exon
so has part: feature:895135-895271:1:exon
so has part: feature:895348-895456:1:exon
so has part: feature:895532-895608:1:exon
so has part: feature:895700-895746:1:exon
so has part: feature:896031-896136:1:exon
so has part: feature:896234-896344:1:exon
so has part: feature:896427-896540:1:exon
so has part: feature:896623-896685:1:exon

XP_030820699.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:890611-890817:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:890988-891109:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:891264-891425:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:891534-891579:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:891670-891771:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:891849-891932:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:892076-892187:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:892277-892342:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:892447-892540:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:892635-892690:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:893088-893159:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:893247-893321:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:893969-894090:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:894161-894234:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:894327-894393:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:894529-894602:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:894722-894845:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:894944-895061:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:895135-895271:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:895348-895456:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:895532-895608:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:895700-895746:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:896031-896136:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:896234-896344:1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:896427-896540:1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:896623-896685:1:exon

TAGLN
type: Gene
subclass of: SO_0000704
RO_0002162: 87175
gene: TAGLN
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 898310..901485
location: region:898310-901485:1
so has part: feature:898310-901485:1:exon
subclass of: SO_0000010

115913127
type: Gene
SIO_000068: ncbigene

position:898310:1
position: 898310
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:901485:1
position: 901485
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:898310-901485:1:exon

TAGLN
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 87175
gene: TAGLN
product: transgelin
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 mRNAs, 6 ESTs, 19 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
transcript id: XM_030965021.1
SIO_010081: TAGLN
subclass of: SO_0000673
so part of: TAGLN
location: join(898310..898444,899982..900180,900366..900543,900630..900732,900944..901485)
location: region:898310-901485:1
so has part: feature:898310-898444:1:exon
so has part: feature:899982-900180:1:exon
so has part: feature:900366-900543:1:exon
so has part: feature:900630-900732:1:exon
so has part: feature:900944-901485:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:898310-898444:1:exon

position:898444:1
position: 898444
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:899982-900180:1:exon

position:899982:1
position: 899982
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:900180:1
position: 900180
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:900366-900543:1:exon

position:900366:1
position: 900366
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:900543:1
position: 900543
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:900630-900732:1:exon

position:900630:1
position: 900630
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:900732:1
position: 900732
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:900944-901485:1:exon

position:900944:1
position: 900944
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

TAGLN
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 87175
gene: TAGLN
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: transgelin
translation: MANKGPAYGMSRDVQSKIEKKYDDELEDRLVEWIVAQCGAAVGRPERGRLGFQVWLKNGIVLSRLVNSLYPDGSKPVKIPDAPPTMVFKQMEQIAQFLKAAEDYGVVKTDIFQTVDLFEAKDMAAVQRTLMALGSLAVTKNDGNYHGDPNWFMKKAQEHKREFTESQLKEGKNIIGLQMGTNKGASQAGMSYGRPRQIIS
SIO_010081: TAGLN
subclass of: SO_0000673
so part of: TAGLN
location: join(900001..900180,900366..900543,900630..900732,900944..901085)
location: region:900001-901085:1
so has part: feature:900001-900180:1:exon
so has part: feature:900366-900543:1:exon
so has part: feature:900630-900732:1:exon
so has part: feature:900944-901085:1:exon

XP_030820881.1
type: Protein
SIO_000068: ncbiprotein

position:900001:1
position: 900001
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:901085:1
position: 901085
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:900001-900180:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:900366-900543:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:900630-900732:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:900944-901085:1:exon

PCSK7
type: Gene
subclass of: SO_0000704
RO_0002162: 87175
gene: PCSK7
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(901874..914868)
location: region:901874-914868:-1
so has part: feature:901874-914868:-1:exon
subclass of: SO_0000010

115913126
type: Gene
SIO_000068: ncbigene

position:901874:-1
position: 901874
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:914868:-1
position: 914868
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:901874-914868:-1:exon

PCSK7
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 87175
gene: PCSK7
product: proprotein convertase subtilisin/kexin type 7, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 mRNAs, 4 ESTs, 17 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XM_030965020.1
SIO_010081: PCSK7
subclass of: SO_0000673
so part of: PCSK7
location: complement(join(901874..903081,903227..903344,903610..903703,903825..903919,904008..904164,904983..905085,905959..906066,907366..907533,909428..909528,910067..910205,911421..911475,912011..912101,912398..912563,912918..913052,913445..913897,914819..914868))
location: region:901874-914868:-1
so has part: feature:914819-914868:-1:exon
so has part: feature:913445-913897:-1:exon
so has part: feature:912918-913052:-1:exon
so has part: feature:912398-912563:-1:exon
so has part: feature:912011-912101:-1:exon
so has part: feature:911421-911475:-1:exon
so has part: feature:910067-910205:-1:exon
so has part: feature:909428-909528:-1:exon
so has part: feature:907366-907533:-1:exon
so has part: feature:905959-906066:-1:exon
so has part: feature:904983-905085:-1:exon
so has part: feature:904008-904164:-1:exon
so has part: feature:903825-903919:-1:exon
so has part: feature:903610-903703:-1:exon
so has part: feature:903227-903344:-1:exon
so has part: feature:901874-903081:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:914819-914868:-1:exon

position:914819:-1
position: 914819
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:913445-913897:-1:exon

position:913445:-1
position: 913445
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:913897:-1
position: 913897
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:912918-913052:-1:exon

position:912918:-1
position: 912918
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:913052:-1
position: 913052
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:912398-912563:-1:exon

position:912398:-1
position: 912398
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:912563:-1
position: 912563
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:912011-912101:-1:exon

position:912011:-1
position: 912011
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:912101:-1
position: 912101
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:911421-911475:-1:exon

position:911421:-1
position: 911421
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:911475:-1
position: 911475
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:910067-910205:-1:exon

position:910067:-1
position: 910067
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:910205:-1
position: 910205
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:909428-909528:-1:exon

position:909428:-1
position: 909428
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:909528:-1
position: 909528
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:907366-907533:-1:exon

position:907366:-1
position: 907366
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:907533:-1
position: 907533
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:905959-906066:-1:exon

position:905959:-1
position: 905959
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:906066:-1
position: 906066
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:904983-905085:-1:exon

position:904983:-1
position: 904983
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:905085:-1
position: 905085
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:904008-904164:-1:exon

position:904008:-1
position: 904008
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:904164:-1
position: 904164
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:903825-903919:-1:exon

position:903825:-1
position: 903825
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:903919:-1
position: 903919
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:903610-903703:-1:exon

position:903610:-1
position: 903610
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:903703:-1
position: 903703
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:903227-903344:-1:exon

position:903227:-1
position: 903227
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:903344:-1
position: 903344
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:901874-903081:-1:exon

position:903081:-1
position: 903081
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

PCSK7
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 87175
gene: PCSK7
product: proprotein convertase subtilisin/kexin type 7, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 mRNAs, 3 ESTs, 17 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_030965019.1
SIO_010081: PCSK7
subclass of: SO_0000673
so part of: PCSK7
location: complement(join(901874..903081,903227..903344,903610..903703,903825..903919,904008..904164,904983..905085,905959..906066,907366..907533,909428..909528,910067..910205,911421..911475,912011..912101,912398..912563,912918..913052,913445..913897,914323..914513))
location: region:901874-914513:-1
so has part: feature:914323-914513:-1:exon
so has part: feature:913445-913897:-1:exon
so has part: feature:912918-913052:-1:exon
so has part: feature:912398-912563:-1:exon
so has part: feature:912011-912101:-1:exon
so has part: feature:911421-911475:-1:exon
so has part: feature:910067-910205:-1:exon
so has part: feature:909428-909528:-1:exon
so has part: feature:907366-907533:-1:exon
so has part: feature:905959-906066:-1:exon
so has part: feature:904983-905085:-1:exon
so has part: feature:904008-904164:-1:exon
so has part: feature:903825-903919:-1:exon
so has part: feature:903610-903703:-1:exon
so has part: feature:903227-903344:-1:exon
so has part: feature:901874-903081:-1:exon

position:914513:-1
position: 914513
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:914323-914513:-1:exon

position:914323:-1
position: 914323
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:913445-913897:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:912918-913052:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:912398-912563:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:912011-912101:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:911421-911475:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:910067-910205:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:909428-909528:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:907366-907533:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:905959-906066:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:904983-905085:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:904008-904164:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:903825-903919:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:903610-903703:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:903227-903344:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:901874-903081:-1:exon

PCSK7
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 87175
gene: PCSK7
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: proprotein convertase subtilisin/kexin type 7 isoform X1
translation: MDCGLNRGSVVIPARAREKQVPPAVEQPSCLMLHWRRAAPLWSAGMEATLCIHTCLWLSASWIPLASPALDTEGSHGKLTWAVSLEAPEEELEQRAEELARTAGLVNMGRVGELKGHYLFAYQPDGHAAPEHEAIRRSVDTLFAQHDSVRWHSEQKLLKRSKRSLHFNDPKYPQQWHLNNRRSPGKDINVTGVWERNVTGRGVTVVVVDDGVEHTIKDIQPNYSPEGSYDLNSNDPDPMPHPDEENGNHHGTRCAGEIAAVPNNSFCTVGVAFGSRIAGIRVLDGPLTDSMEAIAFNKHYQINDIYSCSWGPDDDGKTVDGPHQLGKAALQHGVIAGRRGFGSIFVVASGNGGQHSDNCNYDGYANSIYTVTIGAVDETGSMPFYAEECASMLAVTFSGGDKMMRSIVTTDWDLQKGTGCTEGHTGTSAAAPLAAGMIALMLQVRPCLTWRDVQHVIVFTATKYEDRHAKWDTNQAGFSHSHQHGFGLLNAWRLVNAAKIWESVPYLASYVSPVLKEGRSIPWLPQELEVAWNVTPADLQLSGMRTLEHVAVTVTITHPRRGNLEIRLLCPSGMMSLIGTTRSMDSDPSGFSDWTFSTVRCWGEQAQGTYRLLIRDIGDDSLRPGTLRQWQLTLYGSSWSPAEMQERQRLLEEAMSGQYLSSDFSLPCPPGLDIPEEQRYTITANTLKTLLLLGCFAVFWTFYYMLEVCLTRNEVGLDLACSSSSSCRWYQQGRKHRALESDLEMESVPLYREKDVEEAEMECEHLEPAQDGQEGSWSPTHPKLSSNGRAGSSHEAAPTGTGFLGQEASTELLGEDRERQPC
SIO_010081: PCSK7
subclass of: SO_0000673
so part of: PCSK7
location: complement(join(902677..903081,903227..903344,903610..903703,903825..903919,904008..904164,904983..905085,905959..906066,907366..907533,909428..909528,910067..910205,911421..911475,912011..912101,912398..912563,912918..913052,913445..913897,914323..914403))
location: region:902677-914403:-1
so has part: feature:914323-914403:-1:exon
so has part: feature:913445-913897:-1:exon
so has part: feature:912918-913052:-1:exon
so has part: feature:912398-912563:-1:exon
so has part: feature:912011-912101:-1:exon
so has part: feature:911421-911475:-1:exon
so has part: feature:910067-910205:-1:exon
so has part: feature:909428-909528:-1:exon
so has part: feature:907366-907533:-1:exon
so has part: feature:905959-906066:-1:exon
so has part: feature:904983-905085:-1:exon
so has part: feature:904008-904164:-1:exon
so has part: feature:903825-903919:-1:exon
so has part: feature:903610-903703:-1:exon
so has part: feature:903227-903344:-1:exon
so has part: feature:902677-903081:-1:exon

XP_030820879.1
type: Protein
SIO_000068: ncbiprotein

position:902677:-1
position: 902677
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:914403:-1
position: 914403
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:914323-914403:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:913445-913897:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:912918-913052:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:912398-912563:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:912011-912101:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:911421-911475:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:910067-910205:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:909428-909528:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:907366-907533:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:905959-906066:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:904983-905085:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:904008-904164:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:903825-903919:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:903610-903703:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:903227-903344:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:902677-903081:-1:exon

PCSK7
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 87175
gene: PCSK7
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: proprotein convertase subtilisin/kexin type 7 isoform X2
translation: MLHWRRAAPLWSAGMEATLCIHTCLWLSASWIPLASPALDTEGSHGKLTWAVSLEAPEEELEQRAEELARTAGLVNMGRVGELKGHYLFAYQPDGHAAPEHEAIRRSVDTLFAQHDSVRWHSEQKLLKRSKRSLHFNDPKYPQQWHLNNRRSPGKDINVTGVWERNVTGRGVTVVVVDDGVEHTIKDIQPNYSPEGSYDLNSNDPDPMPHPDEENGNHHGTRCAGEIAAVPNNSFCTVGVAFGSRIAGIRVLDGPLTDSMEAIAFNKHYQINDIYSCSWGPDDDGKTVDGPHQLGKAALQHGVIAGRRGFGSIFVVASGNGGQHSDNCNYDGYANSIYTVTIGAVDETGSMPFYAEECASMLAVTFSGGDKMMRSIVTTDWDLQKGTGCTEGHTGTSAAAPLAAGMIALMLQVRPCLTWRDVQHVIVFTATKYEDRHAKWDTNQAGFSHSHQHGFGLLNAWRLVNAAKIWESVPYLASYVSPVLKEGRSIPWLPQELEVAWNVTPADLQLSGMRTLEHVAVTVTITHPRRGNLEIRLLCPSGMMSLIGTTRSMDSDPSGFSDWTFSTVRCWGEQAQGTYRLLIRDIGDDSLRPGTLRQWQLTLYGSSWSPAEMQERQRLLEEAMSGQYLSSDFSLPCPPGLDIPEEQRYTITANTLKTLLLLGCFAVFWTFYYMLEVCLTRNEVGLDLACSSSSSCRWYQQGRKHRALESDLEMESVPLYREKDVEEAEMECEHLEPAQDGQEGSWSPTHPKLSSNGRAGSSHEAAPTGTGFLGQEASTELLGEDRERQPC
SIO_010081: PCSK7
subclass of: SO_0000673
so part of: PCSK7
location: complement(join(902677..903081,903227..903344,903610..903703,903825..903919,904008..904164,904983..905085,905959..906066,907366..907533,909428..909528,910067..910205,911421..911475,912011..912101,912398..912563,912918..913052,913445..913885))
location: region:902677-913885:-1
so has part: feature:913445-913885:-1:exon
so has part: feature:912918-913052:-1:exon
so has part: feature:912398-912563:-1:exon
so has part: feature:912011-912101:-1:exon
so has part: feature:911421-911475:-1:exon
so has part: feature:910067-910205:-1:exon
so has part: feature:909428-909528:-1:exon
so has part: feature:907366-907533:-1:exon
so has part: feature:905959-906066:-1:exon
so has part: feature:904983-905085:-1:exon
so has part: feature:904008-904164:-1:exon
so has part: feature:903825-903919:-1:exon
so has part: feature:903610-903703:-1:exon
so has part: feature:903227-903344:-1:exon
so has part: feature:902677-903081:-1:exon

XP_030820880.1
type: Protein
SIO_000068: ncbiprotein

position:913885:-1
position: 913885
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:913445-913885:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:912918-913052:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:912398-912563:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:912011-912101:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:911421-911475:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:910067-910205:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:909428-909528:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:907366-907533:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:905959-906066:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:904983-905085:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:904008-904164:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:903825-903919:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:903610-903703:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:903227-903344:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:902677-903081:-1:exon

RNF214
type: Gene
subclass of: SO_0000704
RO_0002162: 87175
gene: RNF214
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 916042..923075
location: region:916042-923075:1
so has part: feature:916042-923075:1:exon
subclass of: SO_0000010

115913075
type: Gene
SIO_000068: ncbigene

position:916042:1
position: 916042
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:923075:1
position: 923075
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:916042-923075:1:exon

RNF214
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 87175
gene: RNF214
product: ring finger protein 214
exception: unclassified transcription discrepancy
note: The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: inserted 2 bases in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 9 ESTs, 2 Proteins, and 94% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
transcript id: XM_030964943.1
SIO_010081: RNF214
subclass of: SO_0000673
so part of: RNF214
location: join(916042..916152,916723..916782,916986..917126,917396..917535,918075..918143,918904..919000,919216..919304,919685..919775,919987..920085,920335..920700,921062..921197,921693..921800,922101..922196,922820..923075)
location: region:916042-923075:1
so has part: feature:916042-916152:1:exon
so has part: feature:916723-916782:1:exon
so has part: feature:916986-917126:1:exon
so has part: feature:917396-917535:1:exon
so has part: feature:918075-918143:1:exon
so has part: feature:918904-919000:1:exon
so has part: feature:919216-919304:1:exon
so has part: feature:919685-919775:1:exon
so has part: feature:919987-920085:1:exon
so has part: feature:920335-920700:1:exon
so has part: feature:921062-921197:1:exon
so has part: feature:921693-921800:1:exon
so has part: feature:922101-922196:1:exon
so has part: feature:922820-923075:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:916042-916152:1:exon

position:916152:1
position: 916152
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:916723-916782:1:exon

position:916723:1
position: 916723
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:916782:1
position: 916782
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:916986-917126:1:exon

position:916986:1
position: 916986
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:917126:1
position: 917126
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:917396-917535:1:exon

position:917396:1
position: 917396
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:917535:1
position: 917535
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:918075-918143:1:exon

position:918075:1
position: 918075
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:918143:1
position: 918143
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:918904-919000:1:exon

position:918904:1
position: 918904
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:919000:1
position: 919000
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:919216-919304:1:exon

position:919216:1
position: 919216
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:919304:1
position: 919304
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:919685-919775:1:exon

position:919685:1
position: 919685
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:919775:1
position: 919775
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:919987-920085:1:exon

position:919987:1
position: 919987
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:920085:1
position: 920085
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:920335-920700:1:exon

position:920335:1
position: 920335
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:920700:1
position: 920700
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:921062-921197:1:exon

position:921062:1
position: 921062
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:921197:1
position: 921197
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:921693-921800:1:exon

position:921693:1
position: 921693
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:921800:1
position: 921800
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:922101-922196:1:exon

position:922101:1
position: 922101
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:922196:1
position: 922196
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:922820-923075:1:exon

position:922820:1
position: 922820
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

RNF214
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 87175
gene: RNF214
exception: unclassified translation discrepancy
note: The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: inserted 2 bases in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: LOW QUALITY PROTEIN: RING finger protein 214
translation: MRSPGPAGAEAAGRARAAEEPDEEAAPARPSQNIAVQTDFKAADADVNTDQDIEKNLDKMMSERALLKERYQEVLDKQRQVENQLQVQLKQLQQRREEEMKNHQEILKAIQDVTIKREETKKKMEKEKKEFLQKEQDLKAEIEKLCEKGRRLLKEQEEKENKIASLIAEQSDEKQLWEMELDKLKNQHNEINRNILEETERAWKAEILSLESRKELLVLKLEEAEKEAELHLTYLKSAPPTLETMRPKQEWEMRLNRIRMTKQSVRDQFNDHIQMVRNGTKLSSLPQIPTPTLPPPPSETDFMLTAFQPSPSLTPRLPFPIGPVPVPMVMPSADPRALSFPLLNPAMSRPNQPSPPLPASQGRSSPVVASLLGTHSPHMAPAAPIPPPPGLGGAXEFPRAQPADKLEKLLEKLLTRFPQCNKAQLTNILQQIKTARRTMAGLTMEELNQLVAAKLAEQQERAAASAQPLGRIRAPMFSAPLPQISTPMFLPPAQVAYPGTASHTPAACKLCLMCQKLVQPGDLHPMACSHVLHKECIKFWAQTNTNDTCPFCPSLK
SIO_010081: RNF214
subclass of: SO_0000673
so part of: RNF214
location: join(916042..916152,916723..916782,916986..917126,917396..917535,918075..918143,918904..919000,919216..919304,919685..919775,919987..920085,920335..920700,921062..921197,921693..921800,922101..922196,922820..922885)
location: region:916042-922885:1
so has part: feature:916042-916152:1:exon
so has part: feature:916723-916782:1:exon
so has part: feature:916986-917126:1:exon
so has part: feature:917396-917535:1:exon
so has part: feature:918075-918143:1:exon
so has part: feature:918904-919000:1:exon
so has part: feature:919216-919304:1:exon
so has part: feature:919685-919775:1:exon
so has part: feature:919987-920085:1:exon
so has part: feature:920335-920700:1:exon
so has part: feature:921062-921197:1:exon
so has part: feature:921693-921800:1:exon
so has part: feature:922101-922196:1:exon
so has part: feature:922820-922885:1:exon

XP_030820803.1
type: Protein
SIO_000068: ncbiprotein

position:922885:1
position: 922885
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:916042-916152:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:916723-916782:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:916986-917126:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:917396-917535:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:918075-918143:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:918904-919000:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:919216-919304:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:919685-919775:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:919987-920085:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:920335-920700:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:921062-921197:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:921693-921800:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:922101-922196:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:922820-922885:1:exon

BACE1
type: Gene
subclass of: SO_0000704
RO_0002162: 87175
gene: BACE1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(923022..932026)
location: region:923022-932026:-1
so has part: feature:923022-932026:-1:exon
subclass of: SO_0000010

115913076
type: Gene
SIO_000068: ncbigene

position:923022:-1
position: 923022
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:932026:-1
position: 932026
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:923022-932026:-1:exon

BACE1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 87175
gene: BACE1
product: beta-secretase 1, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 2 ESTs, 26 Proteins, and 98% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_030964945.1
SIO_010081: BACE1
subclass of: SO_0000673
so part of: BACE1
location: complement(join(923022..924043,925735..926009,926537..926708,926823..926972,927104..927205,927325..927459,927542..927679,927866..928082,928241..928329,931713..932026))
location: region:923022-932026:-1
so has part: feature:931713-932026:-1:exon
so has part: feature:928241-928329:-1:exon
so has part: feature:927866-928082:-1:exon
so has part: feature:927542-927679:-1:exon
so has part: feature:927325-927459:-1:exon
so has part: feature:927104-927205:-1:exon
so has part: feature:926823-926972:-1:exon
so has part: feature:926537-926708:-1:exon
so has part: feature:925735-926009:-1:exon
so has part: feature:923022-924043:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:931713-932026:-1:exon

position:931713:-1
position: 931713
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:928241-928329:-1:exon

position:928241:-1
position: 928241
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:928329:-1
position: 928329
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:927866-928082:-1:exon

position:927866:-1
position: 927866
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:928082:-1
position: 928082
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:927542-927679:-1:exon

position:927542:-1
position: 927542
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:927679:-1
position: 927679
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:927325-927459:-1:exon

position:927325:-1
position: 927325
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:927459:-1
position: 927459
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:927104-927205:-1:exon

position:927104:-1
position: 927104
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:927205:-1
position: 927205
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:926823-926972:-1:exon

position:926823:-1
position: 926823
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:926972:-1
position: 926972
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:926537-926708:-1:exon

position:926537:-1
position: 926537
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:926708:-1
position: 926708
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:925735-926009:-1:exon

position:925735:-1
position: 925735
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:926009:-1
position: 926009
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:923022-924043:-1:exon

position:924043:-1
position: 924043
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

BACE1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 87175
gene: BACE1
product: beta-secretase 1, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 6 ESTs, 26 Proteins, and 98% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
transcript id: XM_030964944.1
SIO_010081: BACE1
subclass of: SO_0000673
so part of: BACE1
location: complement(join(923022..926009,926537..926708,926823..926972,927104..927205,927325..927459,927542..927679,927866..928082,928241..928329,931713..932026))
location: region:923022-932026:-1
so has part: feature:931713-932026:-1:exon
so has part: feature:928241-928329:-1:exon
so has part: feature:927866-928082:-1:exon
so has part: feature:927542-927679:-1:exon
so has part: feature:927325-927459:-1:exon
so has part: feature:927104-927205:-1:exon
so has part: feature:926823-926972:-1:exon
so has part: feature:926537-926708:-1:exon
so has part: feature:923022-926009:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:931713-932026:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:928241-928329:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:927866-928082:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:927542-927679:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:927325-927459:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:927104-927205:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:926823-926972:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:926537-926708:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:923022-926009:-1:exon

BACE1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 87175
gene: BACE1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: beta-secretase 1
translation: MAPAWPWLLLWLGVLRALPAPPRIRLPLRGGAAPPSGLRQRRAPLDAEPDSAGSFVDMIDNLRGKSGQGYYVEMTVGSPPQKLNILVDTGSSNFAVGAAPHPFLRRYYQRQLSSTYRDLRKGVYVPYTQGKWEGELGTDLVTIPHGPNVTVRANIAAITESDKFFINGSNWEGILGLAYAEIARPDDSLEPFFDSLVKQTRVPNIFSLQLCGTGFSPNETEAVASVGGSMIIGGIDRSLYVGDIWYTPIRKEWYYEVIIVKLEVNGQDLNMDCKEYNYDKSIVDSGTTNLRLPKKVFEAAVKSIKTASSTEKFPDGFWLGEQLVCWQVGTTPWHIFPVLSLYLMGEATNQSFRITILPQQYLRPVEDVATSQDDCYKFAISQSSTGTVMGAVIMEGFYVVFDRARKRIGFAVSACHVHDEFRTAAVDGPHLHSNMEDCGYNIPQTDESTLMTIAYVMAAICALFMLPLCLMVFQWRCFRCLRRDHDDFADDISLLK
SIO_010081: BACE1
subclass of: SO_0000673
so part of: BACE1
location: complement(join(925768..926009,926537..926708,926823..926972,927104..927205,927325..927459,927542..927679,927866..928082,928241..928329,931713..931958))
location: region:925768-931958:-1
so has part: feature:931713-931958:-1:exon
so has part: feature:928241-928329:-1:exon
so has part: feature:927866-928082:-1:exon
so has part: feature:927542-927679:-1:exon
so has part: feature:927325-927459:-1:exon
so has part: feature:927104-927205:-1:exon
so has part: feature:926823-926972:-1:exon
so has part: feature:926537-926708:-1:exon
so has part: feature:925768-926009:-1:exon

XP_030820804.1
type: Protein
SIO_000068: ncbiprotein

position:925768:-1
position: 925768
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:931958:-1
position: 931958
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:931713-931958:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:928241-928329:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:927866-928082:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:927542-927679:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:927325-927459:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:927104-927205:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:926823-926972:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:926537-926708:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:925768-926009:-1:exon

BACE1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 87175
gene: BACE1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: beta-secretase 1
translation: MAPAWPWLLLWLGVLRALPAPPRIRLPLRGGAAPPSGLRQRRAPLDAEPDSAGSFVDMIDNLRGKSGQGYYVEMTVGSPPQKLNILVDTGSSNFAVGAAPHPFLRRYYQRQLSSTYRDLRKGVYVPYTQGKWEGELGTDLVTIPHGPNVTVRANIAAITESDKFFINGSNWEGILGLAYAEIARPDDSLEPFFDSLVKQTRVPNIFSLQLCGTGFSPNETEAVASVGGSMIIGGIDRSLYVGDIWYTPIRKEWYYEVIIVKLEVNGQDLNMDCKEYNYDKSIVDSGTTNLRLPKKVFEAAVKSIKTASSTEKFPDGFWLGEQLVCWQVGTTPWHIFPVLSLYLMGEATNQSFRITILPQQYLRPVEDVATSQDDCYKFAISQSSTGTVMGAVIMEGFYVVFDRARKRIGFAVSACHVHDEFRTAAVDGPHLHSNMEDCGYNIPQTDESTLMTIAYVMAAICALFMLPLCLMVFQWRCFRCLRRDHDDFADDISLLK
SIO_010081: BACE1
subclass of: SO_0000673
so part of: BACE1
location: complement(join(925768..926009,926537..926708,926823..926972,927104..927205,927325..927459,927542..927679,927866..928082,928241..928329,931713..931958))
location: region:925768-931958:-1
so has part: feature:931713-931958:-1:exon
so has part: feature:928241-928329:-1:exon
so has part: feature:927866-928082:-1:exon
so has part: feature:927542-927679:-1:exon
so has part: feature:927325-927459:-1:exon
so has part: feature:927104-927205:-1:exon
so has part: feature:926823-926972:-1:exon
so has part: feature:926537-926708:-1:exon
so has part: feature:925768-926009:-1:exon

XP_030820805.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:931713-931958:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:928241-928329:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:927866-928082:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:927542-927679:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:927325-927459:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:927104-927205:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:926823-926972:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:926537-926708:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:925768-926009:-1:exon

CEP164
type: Gene
subclass of: SO_0000704
RO_0002162: 87175
gene: CEP164
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 932407..962698
location: region:932407-962698:1
so has part: feature:932407-962698:1:exon
subclass of: SO_0000010

115913036
type: Gene
SIO_000068: ncbigene

position:932407:1
position: 932407
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:962698:1
position: 962698
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:932407-962698:1:exon

CEP164
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 87175
gene: CEP164
product: centrosomal protein 164
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, 2 Proteins, and 98% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_030964891.1
SIO_010081: CEP164
subclass of: SO_0000673
so part of: CEP164
location: join(932407..932468,934043..934132,934398..934509,934829..935063,935545..935703,936388..936516,936827..936904,942364..942447,943916..943999,947322..947404,950879..951094,952101..952235,952375..952591,953177..953254,953447..953578,953834..953956,954352..954495,954684..954767,955109..955177,955380..955558,956026..956152,956519..956583,956713..956920,957503..957610,958144..958258,958715..959059,959527..959593,959855..959971,960787..960889,962000..962698)
location: region:932407-962698:1
so has part: feature:932407-932468:1:exon
so has part: feature:934043-934132:1:exon
so has part: feature:934398-934509:1:exon
so has part: feature:934829-935063:1:exon
so has part: feature:935545-935703:1:exon
so has part: feature:936388-936516:1:exon
so has part: feature:936827-936904:1:exon
so has part: feature:942364-942447:1:exon
so has part: feature:943916-943999:1:exon
so has part: feature:947322-947404:1:exon
so has part: feature:950879-951094:1:exon
so has part: feature:952101-952235:1:exon
so has part: feature:952375-952591:1:exon
so has part: feature:953177-953254:1:exon
so has part: feature:953447-953578:1:exon
so has part: feature:953834-953956:1:exon
so has part: feature:954352-954495:1:exon
so has part: feature:954684-954767:1:exon
so has part: feature:955109-955177:1:exon
so has part: feature:955380-955558:1:exon
so has part: feature:956026-956152:1:exon
so has part: feature:956519-956583:1:exon
so has part: feature:956713-956920:1:exon
so has part: feature:957503-957610:1:exon
so has part: feature:958144-958258:1:exon
so has part: feature:958715-959059:1:exon
so has part: feature:959527-959593:1:exon
so has part: feature:959855-959971:1:exon
so has part: feature:960787-960889:1:exon
so has part: feature:962000-962698:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:932407-932468:1:exon

position:932468:1
position: 932468
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:934043-934132:1:exon

position:934043:1
position: 934043
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:934132:1
position: 934132
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:934398-934509:1:exon

position:934398:1
position: 934398
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:934509:1
position: 934509
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:934829-935063:1:exon

position:934829:1
position: 934829
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:935063:1
position: 935063
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:935545-935703:1:exon

position:935545:1
position: 935545
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:935703:1
position: 935703
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:936388-936516:1:exon

position:936388:1
position: 936388
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:936516:1
position: 936516
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:936827-936904:1:exon

position:936827:1
position: 936827
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:936904:1
position: 936904
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:942364-942447:1:exon

position:942364:1
position: 942364
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:942447:1
position: 942447
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:943916-943999:1:exon

position:943916:1
position: 943916
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:943999:1
position: 943999
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:947322-947404:1:exon

position:947322:1
position: 947322
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:947404:1
position: 947404
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:950879-951094:1:exon

position:950879:1
position: 950879
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:951094:1
position: 951094
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:952101-952235:1:exon

position:952101:1
position: 952101
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:952235:1
position: 952235
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:952375-952591:1:exon

position:952375:1
position: 952375
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:952591:1
position: 952591
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:953177-953254:1:exon

position:953177:1
position: 953177
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:953254:1
position: 953254
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:953447-953578:1:exon

position:953447:1
position: 953447
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:953578:1
position: 953578
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:953834-953956:1:exon

position:953834:1
position: 953834
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:953956:1
position: 953956
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:954352-954495:1:exon

position:954352:1
position: 954352
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:954495:1
position: 954495
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:954684-954767:1:exon

position:954684:1
position: 954684
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:954767:1
position: 954767
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:955109-955177:1:exon

position:955109:1
position: 955109
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:955177:1
position: 955177
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:955380-955558:1:exon

position:955380:1
position: 955380
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:955558:1
position: 955558
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:956026-956152:1:exon

position:956026:1
position: 956026
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:956152:1
position: 956152
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 22
SIO_000628: feature:956519-956583:1:exon

position:956519:1
position: 956519
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:956583:1
position: 956583
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 23
SIO_000628: feature:956713-956920:1:exon

position:956713:1
position: 956713
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:956920:1
position: 956920
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 24
SIO_000628: feature:957503-957610:1:exon

position:957503:1
position: 957503
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:957610:1
position: 957610
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 25
SIO_000628: feature:958144-958258:1:exon

position:958144:1
position: 958144
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:958258:1
position: 958258
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 26
SIO_000628: feature:958715-959059:1:exon

position:958715:1
position: 958715
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:959059:1
position: 959059
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 27
SIO_000628: feature:959527-959593:1:exon

position:959527:1
position: 959527
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:959593:1
position: 959593
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 28
SIO_000628: feature:959855-959971:1:exon

position:959855:1
position: 959855
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:959971:1
position: 959971
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 29
SIO_000628: feature:960787-960889:1:exon

position:960787:1
position: 960787
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:960889:1
position: 960889
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 30
SIO_000628: feature:962000-962698:1:exon

position:962000:1
position: 962000
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

CEP164
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 87175
gene: CEP164
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: centrosomal protein of 164 kDa
translation: MAGAVRIGDQLILEEDYNESYVPKEQEIRDFAPTIGIDPDKESELLWLARECLVTPMPPEWKACQDIAGGDIYFFNFESGLSTWEHPCDEHYKQLVIREREKLLARGSLKKEKKEKKEKKDKKDKKEKKKDKKEKQLLKQLPPPGSQLAPIQPPLGSLSPLRGLTPHPSIALRGALSLDLGNVVDSSLAPKEGTLPAEVPKPTSHTKNLLDLICEEKSSLNVAVPEKWRNEEEDSENESFPGTSRLLKNVYLDVEALAGSFDFELSMASGVSGCEQDLPVSKSSDHEVPQPLGLDSKSQLSQEVLGVGTVSPDLDSPRSQELGEEDKDQSKASVEEEEQRKGTEAAERQPEKEREQSLSQPHDESLEEIVREVETELEQEEIHLFQAKEEKIQRFQEEMRQQEEEVEAEELHQQKEKPLSAPEEDLAKSEQEEEELLLREEKAKRLERLRAQMASEVEAEEQRMRAEQEARLQQLREEWQSQQLLEKERLQRQQQLALEEMRLAAEEAQQKEMSELEQEQEEFLRQLRDRLGREKKKAAEELEEQFARELQQLRAAAEEKHREVIASLQAQLAEAQSSQEAQLREELQRADQKVQEKALKVKEYERELSELMGDRRREVEKEHERRMERMREEHREALERTQEHYEEEERRQRSELLEGLRSEAARLRQLHDADLKGLQAELEGRLAALQHRHREKERKLQDSENELEIRMKNIQARSEQLQSQEESLQRRRQLLLDEDGRMQLERDEAALASQLRLEESRKEHCSLQESVRQLRRTLQELQDQKAELEAQVDLLQSRSQRLHKRIGELEEAIRSKQESLKELEAEESVESPRKKAELCVEDLRETPQAHSSREPSPPSQSPEDSELQLDRVQSYLAAEGQSLRSAKEFLQRQRRSLRRRRSALRAASLQWHQHLHRAQGAEQGPHSSQLLQGVRQNLQEEAKELDKMKSAMQKGQVLLKKKEEKLSQLESSLLEELSDEDTLKSSACRKVVTFDLSTSEDTNSTSSVNLGQPRSDLRMDLWPVLQQDKIQHLRDSVQSITSELSGVLGLLDSLSQHQPPLLTSTPHQGIPLPTHPSLAGLGGGSSLGNPPRASPLDQWARSSRPSSSYPISGQSVDSMLAEKWHRYFPGGFSWLGGTPVPLDSKLGYVPADEQIRLFQHSKFSEPETKNIEGMIESNKKWLKGFKKDSKVARSPRAQQPPGSSPSLLQLGLDENREIKVYHY
SIO_010081: CEP164
subclass of: SO_0000673
so part of: CEP164
location: join(934054..934132,934398..934509,934829..935063,935545..935703,936388..936516,936827..936904,942364..942447,943916..943999,947322..947404,950879..951094,952101..952235,952375..952591,953177..953254,953447..953578,953834..953956,954352..954495,954684..954767,955109..955177,955380..955558,956026..956152,956519..956583,956713..956920,957503..957610,958144..958258,958715..959059,959527..959593,959855..959971,960787..960886)
location: region:934054-960886:1
so has part: feature:934054-934132:1:exon
so has part: feature:934398-934509:1:exon
so has part: feature:934829-935063:1:exon
so has part: feature:935545-935703:1:exon
so has part: feature:936388-936516:1:exon
so has part: feature:936827-936904:1:exon
so has part: feature:942364-942447:1:exon
so has part: feature:943916-943999:1:exon
so has part: feature:947322-947404:1:exon
so has part: feature:950879-951094:1:exon
so has part: feature:952101-952235:1:exon
so has part: feature:952375-952591:1:exon
so has part: feature:953177-953254:1:exon
so has part: feature:953447-953578:1:exon
so has part: feature:953834-953956:1:exon
so has part: feature:954352-954495:1:exon
so has part: feature:954684-954767:1:exon
so has part: feature:955109-955177:1:exon
so has part: feature:955380-955558:1:exon
so has part: feature:956026-956152:1:exon
so has part: feature:956519-956583:1:exon
so has part: feature:956713-956920:1:exon
so has part: feature:957503-957610:1:exon
so has part: feature:958144-958258:1:exon
so has part: feature:958715-959059:1:exon
so has part: feature:959527-959593:1:exon
so has part: feature:959855-959971:1:exon
so has part: feature:960787-960886:1:exon

XP_030820751.1
type: Protein
SIO_000068: ncbiprotein

position:934054:1
position: 934054
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:960886:1
position: 960886
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:934054-934132:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:934398-934509:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:934829-935063:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:935545-935703:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:936388-936516:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:936827-936904:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:942364-942447:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:943916-943999:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:947322-947404:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:950879-951094:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:952101-952235:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:952375-952591:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:953177-953254:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:953447-953578:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:953834-953956:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:954352-954495:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:954684-954767:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:955109-955177:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:955380-955558:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:956026-956152:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:956519-956583:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:956713-956920:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:957503-957610:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:958144-958258:1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:958715-959059:1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:959527-959593:1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:959855-959971:1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:960787-960886:1:exon

DSCAML1
type: Gene
subclass of: SO_0000704
RO_0002162: 87175
gene: DSCAML1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(969354..1067566)
location: region:969354-1067566:-1
so has part: feature:969354-1067566:-1:exon
subclass of: SO_0000010

115913027
type: Gene
SIO_000068: ncbigene

position:969354:-1
position: 969354
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1067566:-1
position: 1067566
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:969354-1067566:-1:exon

DSCAML1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 87175
gene: DSCAML1
product: DS cell adhesion molecule like 1
exception: unclassified transcription discrepancy
note: The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: inserted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 Proteins, and 97% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_030964880.1
SIO_010081: DSCAML1
subclass of: SO_0000673
so part of: DSCAML1
location: complement(join(969354..970085,973142..973453,973850..974044,974239..974391,974519..974637,974976..975006,975127..975282,975368..975655,976310..976498,978146..978244,978436..978599,978689..978806,979000..979153,980337..980476,981018..981173,981248..981394,982285..982525,983391..983461,983604..983771,984159..984287,984400..984496,984762..984961,989403..989579,989717..989836,990037..990315,993292..993564,995516..995812,996291..996566,997249..997527,998787..998933,1055922..1056068,1058784..1059101,1067453..1067566))
location: region:969354-1067566:-1
so has part: feature:1067453-1067566:-1:exon
so has part: feature:1058784-1059101:-1:exon
so has part: feature:1055922-1056068:-1:exon
so has part: feature:998787-998933:-1:exon
so has part: feature:997249-997527:-1:exon
so has part: feature:996291-996566:-1:exon
so has part: feature:995516-995812:-1:exon
so has part: feature:993292-993564:-1:exon
so has part: feature:990037-990315:-1:exon
so has part: feature:989717-989836:-1:exon
so has part: feature:989403-989579:-1:exon
so has part: feature:984762-984961:-1:exon
so has part: feature:984400-984496:-1:exon
so has part: feature:984159-984287:-1:exon
so has part: feature:983604-983771:-1:exon
so has part: feature:983391-983461:-1:exon
so has part: feature:982285-982525:-1:exon
so has part: feature:981248-981394:-1:exon
so has part: feature:981018-981173:-1:exon
so has part: feature:980337-980476:-1:exon
so has part: feature:979000-979153:-1:exon
so has part: feature:978689-978806:-1:exon
so has part: feature:978436-978599:-1:exon
so has part: feature:978146-978244:-1:exon
so has part: feature:976310-976498:-1:exon
so has part: feature:975368-975655:-1:exon
so has part: feature:975127-975282:-1:exon
so has part: feature:974976-975006:-1:exon
so has part: feature:974519-974637:-1:exon
so has part: feature:974239-974391:-1:exon
so has part: feature:973850-974044:-1:exon
so has part: feature:973142-973453:-1:exon
so has part: feature:969354-970085:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1067453-1067566:-1:exon

position:1067453:-1
position: 1067453
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1058784-1059101:-1:exon

position:1058784:-1
position: 1058784
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1059101:-1
position: 1059101
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1055922-1056068:-1:exon

position:1055922:-1
position: 1055922
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1056068:-1
position: 1056068
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:998787-998933:-1:exon

position:998787:-1
position: 998787
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:998933:-1
position: 998933
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:997249-997527:-1:exon

position:997249:-1
position: 997249
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:997527:-1
position: 997527
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:996291-996566:-1:exon

position:996291:-1
position: 996291
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:996566:-1
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SIO_000300: 7
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SIO_000300: 8
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SIO_000300: 9
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SIO_000300: 10
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SIO_000300: 11
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SIO_000300: 12
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SIO_000300: 13
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SIO_000300: 14
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SIO_000300: 15
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