Camarhynchus parvulus chromosome 23, STF_HiC, whole genome shotgun sequence.
type: Entry
definition: Camarhynchus parvulus chromosome 23, STF_HiC, whole genome shotgun sequence.
sequence version: NC_044593.1
sequence date: 2019-09-26
sequence: sequence
division: CON
label: NC_044593.1
type: RefSeq
SIO_000068: refseq
dblink: PRJNA566393
dblink: SAMEA5603054
keyword: WGS
keyword: RefSeq
source: Camarhynchus parvulus
organism: Camarhynchus parvulus
taxonomy: Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Passeriformes; Thraupidae; Camarhynchus.
comment: REFSEQ INFORMATION: The reference sequence is identical to\nLR595719.1.\nAssembly name: STF_HiC\nThe genomic sequence for this RefSeq record is from the\nwhole-genome assembly released by the UPPSALA UNIVERISTY on\n2019/09/06. The original whole-genome shotgun project has the\naccession CABFNF000000000.1.\n\n##Genome-Annotation-Data-START##\nAnnotation Provider :: NCBI\nAnnotation Status :: Full annotation\nAnnotation Name :: Camarhynchus parvulus Annotation\n Release 100\nAnnotation Version :: 100\nAnnotation Pipeline :: NCBI eukaryotic genome annotation\n pipeline\nAnnotation Software Version :: 8.2\nAnnotation Method :: Best-placed RefSeq; Gnomon\nFeatures Annotated :: Gene; mRNA; CDS; ncRNA\n##Genome-Annotation-Data-END##

sequence
subclass of: SO_0000340
sequence length: 7046529
topology: linear
so has quality: SO_0000987
location: 1..7046529
location: region:1-7046529:1
RO_0002162: 87175

NC_044593
type: RefSeq
SIO_000068: refseq

PRJNA566393
type: BioProject
SIO_000068: bioproject

SAMEA5603054
type: BioSample
SIO_000068: biosample

position:1:1
position: 1
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7046529:1
position: 7046529
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

feature:1-7046529:1:source
so part of: sequence
organism: Camarhynchus parvulus
mol type: genomic DNA
chromosome: 23

87175
type: Taxonomy
SIO_000068: taxonomy

OPRD1
type: Gene
subclass of: SO_0000704
RO_0002162: 87175
gene: OPRD1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(8127..17024)
location: region:8127-17024:-1
so has part: feature:8127-17024:-1:exon
subclass of: SO_0000010

115912932
type: Gene
SIO_000068: ncbigene

position:8127:-1
position: 8127
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:17024:-1
position: 17024
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:8127-17024:-1:exon

OPRD1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 87175
gene: OPRD1
product: opioid receptor delta 1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 5 ESTs, 56 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
transcript id: XM_030964740.1
SIO_010081: OPRD1
subclass of: SO_0000673
so part of: OPRD1
location: complement(join(8127..10001,10724..11073,16626..17024))
location: region:8127-17024:-1
so has part: feature:16626-17024:-1:exon
so has part: feature:10724-11073:-1:exon
so has part: feature:8127-10001:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:16626-17024:-1:exon

position:16626:-1
position: 16626
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:10724-11073:-1:exon

position:10724:-1
position: 10724
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:11073:-1
position: 11073
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:8127-10001:-1:exon

position:10001:-1
position: 10001
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

OPRD1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 87175
gene: OPRD1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: delta-type opioid receptor
translation: MDVTMDVPVELPSGLPTATATPWGNGTAWAPLPGHGVNDTGLQRAKNATSILIAIVITALYSVVCVVGLLGNVLVMYGIVRYTKMKTATNIYIFNLALADAVATSTLPFQSAKYLMETWPFGELLCKVVLSIDYYNMFTSIFTLTMMSVDRYIAVCHPVKALDFRTPAKAKIINVCIWVLSSLIGVPIMVMAVTKSKDGMVLCTLQFPDPPIYWDTVTKICVFIFAFLVPILVITICYGLMILRLKSVRLLSGSKEKDRNLRRITRMVLVVVAAFIICWTPIHIFVIVWTLVDIDKKNPYVVASLHFCIALGYTNSSLNPVLYAFLDENFKRCFREFCLPFRARADQNSFSRARNTTRDHVSTCTASEARNKPA
SIO_010081: OPRD1
subclass of: SO_0000673
so part of: OPRD1
location: complement(join(9469..10001,10724..11073,16626..16867))
location: region:9469-16867:-1
so has part: feature:16626-16867:-1:exon
so has part: feature:10724-11073:-1:exon
so has part: feature:9469-10001:-1:exon

XP_030820600.1
type: Protein
SIO_000068: ncbiprotein

position:9469:-1
position: 9469
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:16867:-1
position: 16867
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:16626-16867:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:10724-11073:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:9469-10001:-1:exon

TCEA3
type: Gene
subclass of: SO_0000704
RO_0002162: 87175
gene: TCEA3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(29570..36423)
location: region:29570-36423:-1
so has part: feature:29570-36423:-1:exon
subclass of: SO_0000010

115912831
type: Gene
SIO_000068: ncbigene

position:29570:-1
position: 29570
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:36423:-1
position: 36423
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:29570-36423:-1:exon

TCEA3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 87175
gene: TCEA3
product: transcription elongation factor A3, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 18 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_030964586.1
SIO_010081: TCEA3
subclass of: SO_0000673
so part of: TCEA3
location: complement(join(29570..30162,30300..30371,30450..30596,31131..31285,32155..32211,32507..32661,32761..32838,33116..33190,33315..33383,33578..33646,33897..34062,34376..34481,34584..34646,36114..36423))
location: region:29570-36423:-1
so has part: feature:36114-36423:-1:exon
so has part: feature:34584-34646:-1:exon
so has part: feature:34376-34481:-1:exon
so has part: feature:33897-34062:-1:exon
so has part: feature:33578-33646:-1:exon
so has part: feature:33315-33383:-1:exon
so has part: feature:33116-33190:-1:exon
so has part: feature:32761-32838:-1:exon
so has part: feature:32507-32661:-1:exon
so has part: feature:32155-32211:-1:exon
so has part: feature:31131-31285:-1:exon
so has part: feature:30450-30596:-1:exon
so has part: feature:30300-30371:-1:exon
so has part: feature:29570-30162:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:36114-36423:-1:exon

position:36114:-1
position: 36114
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:34584-34646:-1:exon

position:34584:-1
position: 34584
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:34646:-1
position: 34646
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:34376-34481:-1:exon

position:34376:-1
position: 34376
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:34481:-1
position: 34481
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:33897-34062:-1:exon

position:33897:-1
position: 33897
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:34062:-1
position: 34062
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:33578-33646:-1:exon

position:33578:-1
position: 33578
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:33646:-1
position: 33646
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:33315-33383:-1:exon

position:33315:-1
position: 33315
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:33383:-1
position: 33383
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:33116-33190:-1:exon

position:33116:-1
position: 33116
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:33190:-1
position: 33190
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:32761-32838:-1:exon

position:32761:-1
position: 32761
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:32838:-1
position: 32838
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:32507-32661:-1:exon

position:32507:-1
position: 32507
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:32661:-1
position: 32661
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:32155-32211:-1:exon

position:32155:-1
position: 32155
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:32211:-1
position: 32211
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:31131-31285:-1:exon

position:31131:-1
position: 31131
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:31285:-1
position: 31285
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:30450-30596:-1:exon

position:30450:-1
position: 30450
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:30596:-1
position: 30596
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:30300-30371:-1:exon

position:30300:-1
position: 30300
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:30371:-1
position: 30371
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:29570-30162:-1:exon

position:30162:-1
position: 30162
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

TCEA3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 87175
gene: TCEA3
product: transcription elongation factor A3, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 18 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_030964585.1
SIO_010081: TCEA3
subclass of: SO_0000673
so part of: TCEA3
location: complement(join(29570..30162,30300..30371,30450..30596,31131..31285,32155..32211,32507..32661,32761..32838,33116..33205,33315..33383,33578..33646,33897..34062,34376..34481,34584..34646,36114..36423))
location: region:29570-36423:-1
so has part: feature:36114-36423:-1:exon
so has part: feature:34584-34646:-1:exon
so has part: feature:34376-34481:-1:exon
so has part: feature:33897-34062:-1:exon
so has part: feature:33578-33646:-1:exon
so has part: feature:33315-33383:-1:exon
so has part: feature:33116-33205:-1:exon
so has part: feature:32761-32838:-1:exon
so has part: feature:32507-32661:-1:exon
so has part: feature:32155-32211:-1:exon
so has part: feature:31131-31285:-1:exon
so has part: feature:30450-30596:-1:exon
so has part: feature:30300-30371:-1:exon
so has part: feature:29570-30162:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:36114-36423:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:34584-34646:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:34376-34481:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:33897-34062:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:33578-33646:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:33315-33383:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:33116-33205:-1:exon

position:33205:-1
position: 33205
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:32761-32838:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:32507-32661:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:32155-32211:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:31131-31285:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:30450-30596:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:30300-30371:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:29570-30162:-1:exon

TCEA3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 87175
gene: TCEA3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: transcription elongation factor A protein 3 isoform X2
translation: MGPTEELVRIAKKLDKMVARKSTEGALDLLKSLTGYTMTIQLLQTTRIGVAVNSVRKHCSDEEVVASAKILIKNWKRLLESTATKKEKDADKKKEKETDGDKEKKKGLDVSSCPSEGVKHSKNTAEKHREKHKERKPSKCDSHATTTQGHSADSSPERESSDGRSPTASSKKSLLDGKKERTASADSRSSTVSSSSSTQKRPSGERRASVGTSLSPAPTSSQRNSSDSKEERANSSKAKPEVPRTPSSPSFSASPCFLAPCYLTGDSVRDKCIEMLTAALRMDDDYKKFSVNCEKMASDIEDHIFQELKSTDMKYRNRVRSRISNLKDPKNPGLRRNVLCGAIEPSLIARMTAEEMASDELKKLRNAMTQEAIREHQMAKTGGTVTDLFQCGKCKKKNCTYNQVQTRSADEPMTTFVLCNECGNRWKFC
SIO_010081: TCEA3
subclass of: SO_0000673
so part of: TCEA3
location: complement(join(30154..30162,30300..30371,30450..30596,31131..31285,32155..32211,32507..32661,32761..32838,33116..33190,33315..33383,33578..33646,33897..34062,34376..34481,34584..34646,36114..36182))
location: region:30154-36182:-1
so has part: feature:36114-36182:-1:exon
so has part: feature:34584-34646:-1:exon
so has part: feature:34376-34481:-1:exon
so has part: feature:33897-34062:-1:exon
so has part: feature:33578-33646:-1:exon
so has part: feature:33315-33383:-1:exon
so has part: feature:33116-33190:-1:exon
so has part: feature:32761-32838:-1:exon
so has part: feature:32507-32661:-1:exon
so has part: feature:32155-32211:-1:exon
so has part: feature:31131-31285:-1:exon
so has part: feature:30450-30596:-1:exon
so has part: feature:30300-30371:-1:exon
so has part: feature:30154-30162:-1:exon

XP_030820446.1
type: Protein
SIO_000068: ncbiprotein

position:30154:-1
position: 30154
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:36182:-1
position: 36182
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:36114-36182:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:34584-34646:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:34376-34481:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:33897-34062:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:33578-33646:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:33315-33383:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:33116-33190:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:32761-32838:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:32507-32661:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:32155-32211:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:31131-31285:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:30450-30596:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:30300-30371:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:30154-30162:-1:exon

TCEA3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 87175
gene: TCEA3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: transcription elongation factor A protein 3 isoform X1
translation: MGPTEELVRIAKKLDKMVARKSTEGALDLLKSLTGYTMTIQLLQTTRIGVAVNSVRKHCSDEEVVASAKILIKNWKRLLESTATKKEKDADKKKEKETDGDKEKKKGLDVSSCPSEGVKHSKNTAEKHREKHKERKPSKCDSHATTTQGHSADSSPERESSDGRSPTASSKKSLLDGKKERTCPARTASADSRSSTVSSSSSTQKRPSGERRASVGTSLSPAPTSSQRNSSDSKEERANSSKAKPEVPRTPSSPSFSASPCFLAPCYLTGDSVRDKCIEMLTAALRMDDDYKKFSVNCEKMASDIEDHIFQELKSTDMKYRNRVRSRISNLKDPKNPGLRRNVLCGAIEPSLIARMTAEEMASDELKKLRNAMTQEAIREHQMAKTGGTVTDLFQCGKCKKKNCTYNQVQTRSADEPMTTFVLCNECGNRWKFC
SIO_010081: TCEA3
subclass of: SO_0000673
so part of: TCEA3
location: complement(join(30154..30162,30300..30371,30450..30596,31131..31285,32155..32211,32507..32661,32761..32838,33116..33205,33315..33383,33578..33646,33897..34062,34376..34481,34584..34646,36114..36182))
location: region:30154-36182:-1
so has part: feature:36114-36182:-1:exon
so has part: feature:34584-34646:-1:exon
so has part: feature:34376-34481:-1:exon
so has part: feature:33897-34062:-1:exon
so has part: feature:33578-33646:-1:exon
so has part: feature:33315-33383:-1:exon
so has part: feature:33116-33205:-1:exon
so has part: feature:32761-32838:-1:exon
so has part: feature:32507-32661:-1:exon
so has part: feature:32155-32211:-1:exon
so has part: feature:31131-31285:-1:exon
so has part: feature:30450-30596:-1:exon
so has part: feature:30300-30371:-1:exon
so has part: feature:30154-30162:-1:exon

XP_030820445.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:36114-36182:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:34584-34646:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:34376-34481:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:33897-34062:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:33578-33646:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:33315-33383:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:33116-33205:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:32761-32838:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:32507-32661:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:32155-32211:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:31131-31285:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:30450-30596:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:30300-30371:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:30154-30162:-1:exon

ASAP3
type: Gene
subclass of: SO_0000704
RO_0002162: 87175
gene: ASAP3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(36898..54929)
location: region:36898-54929:-1
so has part: feature:36898-54929:-1:exon
subclass of: SO_0000010

115912897
type: Gene
SIO_000068: ncbigene

position:36898:-1
position: 36898
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:54929:-1
position: 54929
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:36898-54929:-1:exon

ASAP3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 87175
gene: ASAP3
product: ArfGAP with SH3 domain, ankyrin repeat and PH domain 3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 ESTs, 15 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
transcript id: XM_030964689.1
SIO_010081: ASAP3
subclass of: SO_0000673
so part of: ASAP3
location: complement(join(36898..38212,38489..38611,38759..38903,39389..39662,39750..39993,40108..40215,40388..40455,40545..40660,40768..40853,41186..41366,41629..41723,42129..42262,42377..42564,42653..42701,43207..43294,43987..44056,44289..44398,44647..44733,44857..44932,45688..45773,47821..47947,48207..48256,48541..48615,50105..50250,50813..50885,54683..54929))
location: region:36898-54929:-1
so has part: feature:54683-54929:-1:exon
so has part: feature:50813-50885:-1:exon
so has part: feature:50105-50250:-1:exon
so has part: feature:48541-48615:-1:exon
so has part: feature:48207-48256:-1:exon
so has part: feature:47821-47947:-1:exon
so has part: feature:45688-45773:-1:exon
so has part: feature:44857-44932:-1:exon
so has part: feature:44647-44733:-1:exon
so has part: feature:44289-44398:-1:exon
so has part: feature:43987-44056:-1:exon
so has part: feature:43207-43294:-1:exon
so has part: feature:42653-42701:-1:exon
so has part: feature:42377-42564:-1:exon
so has part: feature:42129-42262:-1:exon
so has part: feature:41629-41723:-1:exon
so has part: feature:41186-41366:-1:exon
so has part: feature:40768-40853:-1:exon
so has part: feature:40545-40660:-1:exon
so has part: feature:40388-40455:-1:exon
so has part: feature:40108-40215:-1:exon
so has part: feature:39750-39993:-1:exon
so has part: feature:39389-39662:-1:exon
so has part: feature:38759-38903:-1:exon
so has part: feature:38489-38611:-1:exon
so has part: feature:36898-38212:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:54683-54929:-1:exon

position:54683:-1
position: 54683
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:50813-50885:-1:exon

position:50813:-1
position: 50813
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:50885:-1
position: 50885
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:50105-50250:-1:exon

position:50105:-1
position: 50105
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:50250:-1
position: 50250
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:48541-48615:-1:exon

position:48541:-1
position: 48541
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:48615:-1
position: 48615
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:48207-48256:-1:exon

position:48207:-1
position: 48207
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:48256:-1
position: 48256
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:47821-47947:-1:exon

position:47821:-1
position: 47821
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:47947:-1
position: 47947
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:45688-45773:-1:exon

position:45688:-1
position: 45688
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:45773:-1
position: 45773
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:44857-44932:-1:exon

position:44857:-1
position: 44857
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:44932:-1
position: 44932
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:44647-44733:-1:exon

position:44647:-1
position: 44647
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:44733:-1
position: 44733
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:44289-44398:-1:exon

position:44289:-1
position: 44289
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:44398:-1
position: 44398
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:43987-44056:-1:exon

position:43987:-1
position: 43987
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:44056:-1
position: 44056
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:43207-43294:-1:exon

position:43207:-1
position: 43207
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:43294:-1
position: 43294
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:42653-42701:-1:exon

position:42653:-1
position: 42653
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:42701:-1
position: 42701
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:42377-42564:-1:exon

position:42377:-1
position: 42377
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:42564:-1
position: 42564
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:42129-42262:-1:exon

position:42129:-1
position: 42129
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:42262:-1
position: 42262
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:41629-41723:-1:exon

position:41629:-1
position: 41629
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:41723:-1
position: 41723
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:41186-41366:-1:exon

position:41186:-1
position: 41186
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:41366:-1
position: 41366
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:40768-40853:-1:exon

position:40768:-1
position: 40768
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:40853:-1
position: 40853
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:40545-40660:-1:exon

position:40545:-1
position: 40545
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:40660:-1
position: 40660
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:40388-40455:-1:exon

position:40388:-1
position: 40388
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:40455:-1
position: 40455
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:40108-40215:-1:exon

position:40108:-1
position: 40108
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:40215:-1
position: 40215
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 22
SIO_000628: feature:39750-39993:-1:exon

position:39750:-1
position: 39750
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:39993:-1
position: 39993
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 23
SIO_000628: feature:39389-39662:-1:exon

position:39389:-1
position: 39389
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:39662:-1
position: 39662
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 24
SIO_000628: feature:38759-38903:-1:exon

position:38759:-1
position: 38759
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:38903:-1
position: 38903
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 25
SIO_000628: feature:38489-38611:-1:exon

position:38489:-1
position: 38489
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:38611:-1
position: 38611
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 26
SIO_000628: feature:36898-38212:-1:exon

position:38212:-1
position: 38212
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

ASAP3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 87175
gene: ASAP3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: arf-GAP with SH3 domain, ANK repeat and PH domain-containing protein 3
translation: MPEQLSVADFLAIASEDLGSPAAAFASKMQKCRGAVGALEESLDGDQAVLQRIRKYVKAIHISGLTHVENEEQYSEALENFGNNHLSQNNHELSTGFLNLAVFTREVTALFKNLVQNLNNIVSFPLDSLLKGQLKDGRLDSKKQIEKAWKDYETKVGKMEKEKERARVAGVIQAEPPAAEVAEDMQKERRLLQLHMCEYLLKARESQMKQGPDFLQSLIKFFHAQHNFFQDGWKAAQNLYPFIEKLAMSLHALHQAQEEEVKQLTQTRDSLRNILQLENKEENLNRKNSGSGYSIHQHQGNKQYGTEKSGFLYKKSDGIRKVWQKRKCGVKYGCLTISHSTINRPPVKLNLLTCQVRPHAEEKKCFDLVTHNRTYHFQAEDEQECVVWVSVLQNSKDEALSNAFKGDGGSGGVAAGTGVDGSMQELTRLVISEVKNMPGNKQCCDCSAPDPTWLSTNLGILTCIECSGIHRELGVHYSRIQSLTLDVLSTSELLLAVSIGNTRFNEIMEAALPTQDCPKPSASSDMAARKEYIMAKYMERRYVQKSSQDNPHGLWEAIQARDLLALLKAFAEGHDLTKPLASPEGQDAGELPLHMAVRHADRSSLPLVDFIIQNGGTLDRVTQNGNTALHYGALYNQPNCLKLLLKGKATFTTVNAAGETALDVARRLKYSECEELLEQAQAGKLSLQIHVDYDWEPPSELPYDSEDELEEKVSPLQHSFKGTSPLATSPLPACPQTRWSCMGMDITNKTYESILVPSCTVPRRAHSEEIPPPLPLKNPTRGSSRPKPSHSPTERPELPRQASEPHFSGPAEAVAPHSLPCASSTGALDGTPSTRSPTESQWAAYWETRSETDTSSSRRGPELSPPPTQPLPGGTVPDIPPVKFGSESTRSYRRIGGTVGKMGSSGSPQSPGGPEDPALSKMPPVPMPRRFAPAKGRQKRVKAVADCKGDKARELTFSKGEVIVVTREEDEQIWVGFIEGDGSRTGVFPASFVHLLQD
SIO_010081: ASAP3
subclass of: SO_0000673
so part of: ASAP3
location: complement(join(38138..38212,38489..38611,38759..38903,39389..39662,39750..39993,40108..40215,40388..40455,40545..40660,40768..40853,41186..41366,41629..41723,42129..42262,42377..42564,42653..42701,43207..43294,43987..44056,44289..44398,44647..44733,44857..44932,45688..45773,47821..47947,48207..48256,48541..48615,50105..50250,50813..50885,54683..54805))
location: region:38138-54805:-1
so has part: feature:54683-54805:-1:exon
so has part: feature:50813-50885:-1:exon
so has part: feature:50105-50250:-1:exon
so has part: feature:48541-48615:-1:exon
so has part: feature:48207-48256:-1:exon
so has part: feature:47821-47947:-1:exon
so has part: feature:45688-45773:-1:exon
so has part: feature:44857-44932:-1:exon
so has part: feature:44647-44733:-1:exon
so has part: feature:44289-44398:-1:exon
so has part: feature:43987-44056:-1:exon
so has part: feature:43207-43294:-1:exon
so has part: feature:42653-42701:-1:exon
so has part: feature:42377-42564:-1:exon
so has part: feature:42129-42262:-1:exon
so has part: feature:41629-41723:-1:exon
so has part: feature:41186-41366:-1:exon
so has part: feature:40768-40853:-1:exon
so has part: feature:40545-40660:-1:exon
so has part: feature:40388-40455:-1:exon
so has part: feature:40108-40215:-1:exon
so has part: feature:39750-39993:-1:exon
so has part: feature:39389-39662:-1:exon
so has part: feature:38759-38903:-1:exon
so has part: feature:38489-38611:-1:exon
so has part: feature:38138-38212:-1:exon

XP_030820549.1
type: Protein
SIO_000068: ncbiprotein

position:38138:-1
position: 38138
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:54805:-1
position: 54805
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:54683-54805:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:50813-50885:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:50105-50250:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:48541-48615:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:48207-48256:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:47821-47947:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:45688-45773:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:44857-44932:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:44647-44733:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:44289-44398:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:43987-44056:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:43207-43294:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:42653-42701:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:42377-42564:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:42129-42262:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:41629-41723:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:41186-41366:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:40768-40853:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:40545-40660:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:40388-40455:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:40108-40215:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:39750-39993:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:39389-39662:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:38759-38903:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:38489-38611:-1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:38138-38212:-1:exon

E2F2
type: Gene
subclass of: SO_0000704
RO_0002162: 87175
gene: E2F2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(57083..65468)
location: region:57083-65468:-1
so has part: feature:57083-65468:-1:exon
subclass of: SO_0000010

115912841
type: Gene
SIO_000068: ncbigene

position:57083:-1
position: 57083
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:65468:-1
position: 65468
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:57083-65468:-1:exon

E2F2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 87175
gene: E2F2
product: E2F transcription factor 2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 20 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XM_030964601.1
SIO_010081: E2F2
subclass of: SO_0000673
so part of: E2F2
location: complement(join(57083..58555,58794..58908,59073..59231,59335..59554,59908..59995,64864..65468))
location: region:57083-65468:-1
so has part: feature:64864-65468:-1:exon
so has part: feature:59908-59995:-1:exon
so has part: feature:59335-59554:-1:exon
so has part: feature:59073-59231:-1:exon
so has part: feature:58794-58908:-1:exon
so has part: feature:57083-58555:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:64864-65468:-1:exon

position:64864:-1
position: 64864
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:59908-59995:-1:exon

position:59908:-1
position: 59908
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:59995:-1
position: 59995
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:59335-59554:-1:exon

position:59335:-1
position: 59335
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:59554:-1
position: 59554
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:59073-59231:-1:exon

position:59073:-1
position: 59073
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:59231:-1
position: 59231
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:58794-58908:-1:exon

position:58794:-1
position: 58794
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:58908:-1
position: 58908
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:57083-58555:-1:exon

position:58555:-1
position: 58555
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

E2F2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 87175
gene: E2F2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: transcription factor E2F2
translation: MLRVPRGVSPSPGRGGTALPPPPPHRHPKKVMSVMVSCDPGAPSRGSPPLSAGCFTQVYTPAAVSTPASRGGRLCDTPQGPELRTLCSASAGRLPAKRKLDLEGPEFRTPKGKGWTLAQVPSPRTPKSPGEKTRYDTSLGLLTKKFIHLLNESPDGVVDLNRAAEVLEVQKRRIYDITNVLEGIQLIRKKSKNHIQWMGTGIFEDAAMVAKQQVLREELAELVRTERMLDQLVQDCALQIQQLAENESNQRLAYVTYQDLRAISRFQEQTVIAVKAPPETQLEVPDFSQENFQLYLKSTNGPIEVYLCPEEIMEESPTKDHPVPSAVTSPQDHSVPLCLTNSSPSATQPLHPISQSWGSTGTPLSPPSLPLLIQGGPSSLLEMEPGLLGSPAHLLQQTEDQLPCTPSRLDLGPFVAFSPPLEQDDYLWGLEGEGVTDLFETYDLGDLLKH
SIO_010081: E2F2
subclass of: SO_0000673
so part of: E2F2
location: complement(join(58070..58555,58794..58908,59073..59231,59335..59554,59908..59995,64864..65148))
location: region:58070-65148:-1
so has part: feature:64864-65148:-1:exon
so has part: feature:59908-59995:-1:exon
so has part: feature:59335-59554:-1:exon
so has part: feature:59073-59231:-1:exon
so has part: feature:58794-58908:-1:exon
so has part: feature:58070-58555:-1:exon

XP_030820461.1
type: Protein
SIO_000068: ncbiprotein

position:58070:-1
position: 58070
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:65148:-1
position: 65148
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:64864-65148:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:59908-59995:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:59335-59554:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:59073-59231:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:58794-58908:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:58070-58555:-1:exon

ID3
type: Gene
subclass of: SO_0000704
RO_0002162: 87175
gene: ID3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(71711..73304)
location: region:71711-73304:-1
so has part: feature:71711-73304:-1:exon
subclass of: SO_0000010

115912850
type: Gene
SIO_000068: ncbigene

position:71711:-1
position: 71711
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:73304:-1
position: 73304
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:71711-73304:-1:exon

ID3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 87175
gene: ID3
product: inhibitor of DNA binding 3, HLH protein
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 mRNAs, 15 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
transcript id: XM_030964622.1
SIO_010081: ID3
subclass of: SO_0000673
so part of: ID3
location: complement(join(71711..72031,72523..72594,72796..73304))
location: region:71711-73304:-1
so has part: feature:72796-73304:-1:exon
so has part: feature:72523-72594:-1:exon
so has part: feature:71711-72031:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:72796-73304:-1:exon

position:72796:-1
position: 72796
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:72523-72594:-1:exon

position:72523:-1
position: 72523
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:72594:-1
position: 72594
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:71711-72031:-1:exon

position:72031:-1
position: 72031
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

ID3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 87175
gene: ID3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: DNA-binding protein inhibitor ID-3
translation: MKAISPVRSVRSCYEAVCCLSEQSLAIARGSHNKSPALEEPMNLLYDMNDCYSKLRELVPGIPQGTKVSQVEILQHVIDYIFDLQIVLEEGSKGRDPSSEATLFSLKAAELASELRTKDERSLCH
SIO_010081: ID3
subclass of: SO_0000673
so part of: ID3
location: complement(join(72538..72594,72796..73116))
location: region:72538-73116:-1
so has part: feature:72796-73116:-1:exon
so has part: feature:72538-72594:-1:exon

XP_030820482.1
type: Protein
SIO_000068: ncbiprotein

position:72538:-1
position: 72538
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:73116:-1
position: 73116
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:72796-73116:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:72538-72594:-1:exon

RCC1
type: Gene
subclass of: SO_0000704
RO_0002162: 87175
gene: RCC1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(83524..94062)
location: region:83524-94062:-1
so has part: feature:83524-94062:-1:exon
subclass of: SO_0000010

115912855
type: Gene
SIO_000068: ncbigene

position:83524:-1
position: 83524
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:94062:-1
position: 94062
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:83524-94062:-1:exon

RCC1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 87175
gene: RCC1
product: regulator of chromosome condensation 1, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 1 EST, 9 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XM_030964628.1
SIO_010081: RCC1
subclass of: SO_0000673
so part of: RCC1
location: complement(join(83524..85774,86294..86446,86850..86969,87345..87500,87693..87815,88705..88801,88885..89064,89918..90105,90208..90285,90469..90546,90857..91044))
location: region:83524-91044:-1
so has part: feature:90857-91044:-1:exon
so has part: feature:90469-90546:-1:exon
so has part: feature:90208-90285:-1:exon
so has part: feature:89918-90105:-1:exon
so has part: feature:88885-89064:-1:exon
so has part: feature:88705-88801:-1:exon
so has part: feature:87693-87815:-1:exon
so has part: feature:87345-87500:-1:exon
so has part: feature:86850-86969:-1:exon
so has part: feature:86294-86446:-1:exon
so has part: feature:83524-85774:-1:exon

position:91044:-1
position: 91044
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:90857-91044:-1:exon

position:90857:-1
position: 90857
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:90469-90546:-1:exon

position:90469:-1
position: 90469
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:90546:-1
position: 90546
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:90208-90285:-1:exon

position:90208:-1
position: 90208
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:90285:-1
position: 90285
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:89918-90105:-1:exon

position:89918:-1
position: 89918
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:90105:-1
position: 90105
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:88885-89064:-1:exon

position:88885:-1
position: 88885
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:89064:-1
position: 89064
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:88705-88801:-1:exon

position:88705:-1
position: 88705
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:88801:-1
position: 88801
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:87693-87815:-1:exon

position:87693:-1
position: 87693
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:87815:-1
position: 87815
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:87345-87500:-1:exon

position:87345:-1
position: 87345
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:87500:-1
position: 87500
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:86850-86969:-1:exon

position:86850:-1
position: 86850
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:86969:-1
position: 86969
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:86294-86446:-1:exon

position:86294:-1
position: 86294
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:86446:-1
position: 86446
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:83524-85774:-1:exon

position:85774:-1
position: 85774
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

RCC1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 87175
gene: RCC1
product: regulator of chromosome condensation 1, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 1 EST, 9 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_030964629.1
SIO_010081: RCC1
subclass of: SO_0000673
so part of: RCC1
location: complement(join(83525..85774,86294..86446,86850..86969,87345..87500,87693..87815,88705..88801,88885..89064,89918..90105,90208..90285,90469..90546,90869..90902))
location: region:83525-90902:-1
so has part: feature:90869-90902:-1:exon
so has part: feature:90469-90546:-1:exon
so has part: feature:90208-90285:-1:exon
so has part: feature:89918-90105:-1:exon
so has part: feature:88885-89064:-1:exon
so has part: feature:88705-88801:-1:exon
so has part: feature:87693-87815:-1:exon
so has part: feature:87345-87500:-1:exon
so has part: feature:86850-86969:-1:exon
so has part: feature:86294-86446:-1:exon
so has part: feature:83525-85774:-1:exon

position:83525:-1
position: 83525
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:90902:-1
position: 90902
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:90869-90902:-1:exon

position:90869:-1
position: 90869
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:90469-90546:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:90208-90285:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:89918-90105:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:88885-89064:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:88705-88801:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:87693-87815:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:87345-87500:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:86850-86969:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:86294-86446:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:83525-85774:-1:exon

RCC1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 87175
gene: RCC1
product: regulator of chromosome condensation 1, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 1 EST, 9 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_030964632.1
SIO_010081: RCC1
subclass of: SO_0000673
so part of: RCC1
location: complement(join(83526..85774,86294..86446,86850..86969,87345..87500,87693..87815,88705..88801,88885..89064,89918..90105,90208..90285,90469..90546,91478..92063))
location: region:83526-92063:-1
so has part: feature:91478-92063:-1:exon
so has part: feature:90469-90546:-1:exon
so has part: feature:90208-90285:-1:exon
so has part: feature:89918-90105:-1:exon
so has part: feature:88885-89064:-1:exon
so has part: feature:88705-88801:-1:exon
so has part: feature:87693-87815:-1:exon
so has part: feature:87345-87500:-1:exon
so has part: feature:86850-86969:-1:exon
so has part: feature:86294-86446:-1:exon
so has part: feature:83526-85774:-1:exon

position:83526:-1
position: 83526
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:92063:-1
position: 92063
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:91478-92063:-1:exon

position:91478:-1
position: 91478
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:90469-90546:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:90208-90285:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:89918-90105:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:88885-89064:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:88705-88801:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:87693-87815:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:87345-87500:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:86850-86969:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:86294-86446:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:83526-85774:-1:exon

RCC1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 87175
gene: RCC1
product: regulator of chromosome condensation 1, transcript variant X6
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 1 EST, 9 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_030964634.1
SIO_010081: RCC1
subclass of: SO_0000673
so part of: RCC1
location: complement(join(83526..85774,86294..86446,86850..86969,87345..87500,87693..87815,88705..88801,88885..89064,89918..90105,90208..90285,90469..90546,91139..91419))
location: region:83526-91419:-1
so has part: feature:91139-91419:-1:exon
so has part: feature:90469-90546:-1:exon
so has part: feature:90208-90285:-1:exon
so has part: feature:89918-90105:-1:exon
so has part: feature:88885-89064:-1:exon
so has part: feature:88705-88801:-1:exon
so has part: feature:87693-87815:-1:exon
so has part: feature:87345-87500:-1:exon
so has part: feature:86850-86969:-1:exon
so has part: feature:86294-86446:-1:exon
so has part: feature:83526-85774:-1:exon

position:91419:-1
position: 91419
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:91139-91419:-1:exon

position:91139:-1
position: 91139
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:90469-90546:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:90208-90285:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:89918-90105:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:88885-89064:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:88705-88801:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:87693-87815:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:87345-87500:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:86850-86969:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:86294-86446:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:83526-85774:-1:exon

RCC1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 87175
gene: RCC1
product: regulator of chromosome condensation 1, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 1 EST, 9 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
transcript id: XM_030964631.1
SIO_010081: RCC1
subclass of: SO_0000673
so part of: RCC1
location: complement(join(83527..85774,86294..86446,86850..86969,87345..87500,87693..87815,88705..88801,88885..89064,89918..90105,90208..90285,90469..90546,92980..93028,93339..93380,93771..93817,94038..94062))
location: region:83527-94062:-1
so has part: feature:94038-94062:-1:exon
so has part: feature:93771-93817:-1:exon
so has part: feature:93339-93380:-1:exon
so has part: feature:92980-93028:-1:exon
so has part: feature:90469-90546:-1:exon
so has part: feature:90208-90285:-1:exon
so has part: feature:89918-90105:-1:exon
so has part: feature:88885-89064:-1:exon
so has part: feature:88705-88801:-1:exon
so has part: feature:87693-87815:-1:exon
so has part: feature:87345-87500:-1:exon
so has part: feature:86850-86969:-1:exon
so has part: feature:86294-86446:-1:exon
so has part: feature:83527-85774:-1:exon

position:83527:-1
position: 83527
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:94038-94062:-1:exon

position:94038:-1
position: 94038
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:93771-93817:-1:exon

position:93771:-1
position: 93771
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:93817:-1
position: 93817
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:93339-93380:-1:exon

position:93339:-1
position: 93339
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:93380:-1
position: 93380
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:92980-93028:-1:exon

position:92980:-1
position: 92980
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:93028:-1
position: 93028
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:90469-90546:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:90208-90285:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:89918-90105:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:88885-89064:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:88705-88801:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:87693-87815:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:87345-87500:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:86850-86969:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:86294-86446:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:83527-85774:-1:exon

RCC1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 87175
gene: RCC1
product: regulator of chromosome condensation 1, transcript variant X5
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 1 EST, 9 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
transcript id: XM_030964633.1
SIO_010081: RCC1
subclass of: SO_0000673
so part of: RCC1
location: complement(join(83527..85774,86294..86446,86850..86969,87345..87500,87693..87815,88705..88801,88885..89064,89918..90105,90208..90285,90469..90546,92980..93028,93339..93380,93771..94055))
location: region:83527-94055:-1
so has part: feature:93771-94055:-1:exon
so has part: feature:93339-93380:-1:exon
so has part: feature:92980-93028:-1:exon
so has part: feature:90469-90546:-1:exon
so has part: feature:90208-90285:-1:exon
so has part: feature:89918-90105:-1:exon
so has part: feature:88885-89064:-1:exon
so has part: feature:88705-88801:-1:exon
so has part: feature:87693-87815:-1:exon
so has part: feature:87345-87500:-1:exon
so has part: feature:86850-86969:-1:exon
so has part: feature:86294-86446:-1:exon
so has part: feature:83527-85774:-1:exon

position:94055:-1
position: 94055
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:93771-94055:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:93339-93380:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:92980-93028:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:90469-90546:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:90208-90285:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:89918-90105:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:88885-89064:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:88705-88801:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:87693-87815:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:87345-87500:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:86850-86969:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:86294-86446:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:83527-85774:-1:exon

RCC1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 87175
gene: RCC1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: regulator of chromosome condensation isoform X2
translation: MRNGAGDSMMPGKRRVQILVPEEVSTEMKKVKDSKMPAKRRMKILVPEEESTETKKVKVSHPSHCSQPGLVLTLGQGNVGQLGLGEDIMERKKPALVTLPEMVVQVEAGGMHTVCLSQTGKIYTFGCNDEGALGRDTSAEGSESSPGLVELQEKVVQVSAGDSHTAALTEDGRVFVWGSFRDNNGVIGLLEPMKTSSVPVLLQLNTPVVKIVSGNDHLVMLTVDGDLFTCGCGEQGQLGRVPALFATRGGRRGLERMLVPQLVPARGRGRRSKMRFQDAFCGAYFTFAVTREGHIYGFGLSNYHQLGTQDTEPCFSPQNLTSFKNSTKSWVGFSGGQHHTVCVDSEGKAYSLGRAEYGRLGLGTGAEEKSTPTVIPELPSIVSVACGASVGYAVSSDGRAFAWGMGTNYQLGTGEEDDVWSPVEMTGKQLENRRVLAVSSGGQHTVLLVSDKEQS
SIO_010081: RCC1
subclass of: SO_0000673
so part of: RCC1
location: complement(join(85599..85774,86294..86446,86850..86969,87345..87500,87693..87815,88705..88801,88885..89064,89918..90105,90208..90285,90469..90546,90869..90887))
location: region:85599-90887:-1
so has part: feature:90869-90887:-1:exon
so has part: feature:90469-90546:-1:exon
so has part: feature:90208-90285:-1:exon
so has part: feature:89918-90105:-1:exon
so has part: feature:88885-89064:-1:exon
so has part: feature:88705-88801:-1:exon
so has part: feature:87693-87815:-1:exon
so has part: feature:87345-87500:-1:exon
so has part: feature:86850-86969:-1:exon
so has part: feature:86294-86446:-1:exon
so has part: feature:85599-85774:-1:exon

XP_030820489.1
type: Protein
SIO_000068: ncbiprotein

position:85599:-1
position: 85599
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:90887:-1
position: 90887
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:90869-90887:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:90469-90546:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:90208-90285:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:89918-90105:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:88885-89064:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:88705-88801:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:87693-87815:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:87345-87500:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:86850-86969:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:86294-86446:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:85599-85774:-1:exon

RCC1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 87175
gene: RCC1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: regulator of chromosome condensation isoform X1
translation: MRNGAGGEDADSMMPGKRRVQILVPEEVSTEMKKVKDSKMPAKRRMKILVPEEESTETKKVKVSHPSHCSQPGLVLTLGQGNVGQLGLGEDIMERKKPALVTLPEMVVQVEAGGMHTVCLSQTGKIYTFGCNDEGALGRDTSAEGSESSPGLVELQEKVVQVSAGDSHTAALTEDGRVFVWGSFRDNNGVIGLLEPMKTSSVPVLLQLNTPVVKIVSGNDHLVMLTVDGDLFTCGCGEQGQLGRVPALFATRGGRRGLERMLVPQLVPARGRGRRSKMRFQDAFCGAYFTFAVTREGHIYGFGLSNYHQLGTQDTEPCFSPQNLTSFKNSTKSWVGFSGGQHHTVCVDSEGKAYSLGRAEYGRLGLGTGAEEKSTPTVIPELPSIVSVACGASVGYAVSSDGRAFAWGMGTNYQLGTGEEDDVWSPVEMTGKQLENRRVLAVSSGGQHTVLLVSDKEQS
SIO_010081: RCC1
subclass of: SO_0000673
so part of: RCC1
location: complement(join(85599..85774,86294..86446,86850..86969,87345..87500,87693..87815,88705..88801,88885..89064,89918..90105,90208..90285,90469..90546,90857..90887))
location: region:85599-90887:-1
so has part: feature:90857-90887:-1:exon
so has part: feature:90469-90546:-1:exon
so has part: feature:90208-90285:-1:exon
so has part: feature:89918-90105:-1:exon
so has part: feature:88885-89064:-1:exon
so has part: feature:88705-88801:-1:exon
so has part: feature:87693-87815:-1:exon
so has part: feature:87345-87500:-1:exon
so has part: feature:86850-86969:-1:exon
so has part: feature:86294-86446:-1:exon
so has part: feature:85599-85774:-1:exon

XP_030820488.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:90857-90887:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:90469-90546:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:90208-90285:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:89918-90105:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:88885-89064:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:88705-88801:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:87693-87815:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:87345-87500:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:86850-86969:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:86294-86446:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:85599-85774:-1:exon

RCC1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 87175
gene: RCC1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: regulator of chromosome condensation isoform X3
translation: MMPGKRRVQILVPEEVSTEMKKVKDSKMPAKRRMKILVPEEESTETKKVKVSHPSHCSQPGLVLTLGQGNVGQLGLGEDIMERKKPALVTLPEMVVQVEAGGMHTVCLSQTGKIYTFGCNDEGALGRDTSAEGSESSPGLVELQEKVVQVSAGDSHTAALTEDGRVFVWGSFRDNNGVIGLLEPMKTSSVPVLLQLNTPVVKIVSGNDHLVMLTVDGDLFTCGCGEQGQLGRVPALFATRGGRRGLERMLVPQLVPARGRGRRSKMRFQDAFCGAYFTFAVTREGHIYGFGLSNYHQLGTQDTEPCFSPQNLTSFKNSTKSWVGFSGGQHHTVCVDSEGKAYSLGRAEYGRLGLGTGAEEKSTPTVIPELPSIVSVACGASVGYAVSSDGRAFAWGMGTNYQLGTGEEDDVWSPVEMTGKQLENRRVLAVSSGGQHTVLLVSDKEQS
SIO_010081: RCC1
subclass of: SO_0000673
so part of: RCC1
location: complement(join(85599..85774,86294..86446,86850..86969,87345..87500,87693..87815,88705..88801,88885..89064,89918..90105,90208..90285,90469..90541))
location: region:85599-90541:-1
so has part: feature:90469-90541:-1:exon
so has part: feature:90208-90285:-1:exon
so has part: feature:89918-90105:-1:exon
so has part: feature:88885-89064:-1:exon
so has part: feature:88705-88801:-1:exon
so has part: feature:87693-87815:-1:exon
so has part: feature:87345-87500:-1:exon
so has part: feature:86850-86969:-1:exon
so has part: feature:86294-86446:-1:exon
so has part: feature:85599-85774:-1:exon

XP_030820491.1
type: Protein
SIO_000068: ncbiprotein

position:90541:-1
position: 90541
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:90469-90541:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:90208-90285:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:89918-90105:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:88885-89064:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:88705-88801:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:87693-87815:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:87345-87500:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:86850-86969:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:86294-86446:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:85599-85774:-1:exon

RCC1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 87175
gene: RCC1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: regulator of chromosome condensation isoform X3
translation: MMPGKRRVQILVPEEVSTEMKKVKDSKMPAKRRMKILVPEEESTETKKVKVSHPSHCSQPGLVLTLGQGNVGQLGLGEDIMERKKPALVTLPEMVVQVEAGGMHTVCLSQTGKIYTFGCNDEGALGRDTSAEGSESSPGLVELQEKVVQVSAGDSHTAALTEDGRVFVWGSFRDNNGVIGLLEPMKTSSVPVLLQLNTPVVKIVSGNDHLVMLTVDGDLFTCGCGEQGQLGRVPALFATRGGRRGLERMLVPQLVPARGRGRRSKMRFQDAFCGAYFTFAVTREGHIYGFGLSNYHQLGTQDTEPCFSPQNLTSFKNSTKSWVGFSGGQHHTVCVDSEGKAYSLGRAEYGRLGLGTGAEEKSTPTVIPELPSIVSVACGASVGYAVSSDGRAFAWGMGTNYQLGTGEEDDVWSPVEMTGKQLENRRVLAVSSGGQHTVLLVSDKEQS
SIO_010081: RCC1
subclass of: SO_0000673
so part of: RCC1
location: complement(join(85599..85774,86294..86446,86850..86969,87345..87500,87693..87815,88705..88801,88885..89064,89918..90105,90208..90285,90469..90541))
location: region:85599-90541:-1
so has part: feature:90469-90541:-1:exon
so has part: feature:90208-90285:-1:exon
so has part: feature:89918-90105:-1:exon
so has part: feature:88885-89064:-1:exon
so has part: feature:88705-88801:-1:exon
so has part: feature:87693-87815:-1:exon
so has part: feature:87345-87500:-1:exon
so has part: feature:86850-86969:-1:exon
so has part: feature:86294-86446:-1:exon
so has part: feature:85599-85774:-1:exon

XP_030820492.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:90469-90541:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:90208-90285:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:89918-90105:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:88885-89064:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:88705-88801:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:87693-87815:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:87345-87500:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:86850-86969:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:86294-86446:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:85599-85774:-1:exon

RCC1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 87175
gene: RCC1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: regulator of chromosome condensation isoform X3
translation: MMPGKRRVQILVPEEVSTEMKKVKDSKMPAKRRMKILVPEEESTETKKVKVSHPSHCSQPGLVLTLGQGNVGQLGLGEDIMERKKPALVTLPEMVVQVEAGGMHTVCLSQTGKIYTFGCNDEGALGRDTSAEGSESSPGLVELQEKVVQVSAGDSHTAALTEDGRVFVWGSFRDNNGVIGLLEPMKTSSVPVLLQLNTPVVKIVSGNDHLVMLTVDGDLFTCGCGEQGQLGRVPALFATRGGRRGLERMLVPQLVPARGRGRRSKMRFQDAFCGAYFTFAVTREGHIYGFGLSNYHQLGTQDTEPCFSPQNLTSFKNSTKSWVGFSGGQHHTVCVDSEGKAYSLGRAEYGRLGLGTGAEEKSTPTVIPELPSIVSVACGASVGYAVSSDGRAFAWGMGTNYQLGTGEEDDVWSPVEMTGKQLENRRVLAVSSGGQHTVLLVSDKEQS
SIO_010081: RCC1
subclass of: SO_0000673
so part of: RCC1
location: complement(join(85599..85774,86294..86446,86850..86969,87345..87500,87693..87815,88705..88801,88885..89064,89918..90105,90208..90285,90469..90541))
location: region:85599-90541:-1
so has part: feature:90469-90541:-1:exon
so has part: feature:90208-90285:-1:exon
so has part: feature:89918-90105:-1:exon
so has part: feature:88885-89064:-1:exon
so has part: feature:88705-88801:-1:exon
so has part: feature:87693-87815:-1:exon
so has part: feature:87345-87500:-1:exon
so has part: feature:86850-86969:-1:exon
so has part: feature:86294-86446:-1:exon
so has part: feature:85599-85774:-1:exon

XP_030820493.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:90469-90541:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:90208-90285:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:89918-90105:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:88885-89064:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:88705-88801:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:87693-87815:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:87345-87500:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:86850-86969:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:86294-86446:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:85599-85774:-1:exon

RCC1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 87175
gene: RCC1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: regulator of chromosome condensation isoform X3
translation: MMPGKRRVQILVPEEVSTEMKKVKDSKMPAKRRMKILVPEEESTETKKVKVSHPSHCSQPGLVLTLGQGNVGQLGLGEDIMERKKPALVTLPEMVVQVEAGGMHTVCLSQTGKIYTFGCNDEGALGRDTSAEGSESSPGLVELQEKVVQVSAGDSHTAALTEDGRVFVWGSFRDNNGVIGLLEPMKTSSVPVLLQLNTPVVKIVSGNDHLVMLTVDGDLFTCGCGEQGQLGRVPALFATRGGRRGLERMLVPQLVPARGRGRRSKMRFQDAFCGAYFTFAVTREGHIYGFGLSNYHQLGTQDTEPCFSPQNLTSFKNSTKSWVGFSGGQHHTVCVDSEGKAYSLGRAEYGRLGLGTGAEEKSTPTVIPELPSIVSVACGASVGYAVSSDGRAFAWGMGTNYQLGTGEEDDVWSPVEMTGKQLENRRVLAVSSGGQHTVLLVSDKEQS
SIO_010081: RCC1
subclass of: SO_0000673
so part of: RCC1
location: complement(join(85599..85774,86294..86446,86850..86969,87345..87500,87693..87815,88705..88801,88885..89064,89918..90105,90208..90285,90469..90541))
location: region:85599-90541:-1
so has part: feature:90469-90541:-1:exon
so has part: feature:90208-90285:-1:exon
so has part: feature:89918-90105:-1:exon
so has part: feature:88885-89064:-1:exon
so has part: feature:88705-88801:-1:exon
so has part: feature:87693-87815:-1:exon
so has part: feature:87345-87500:-1:exon
so has part: feature:86850-86969:-1:exon
so has part: feature:86294-86446:-1:exon
so has part: feature:85599-85774:-1:exon

XP_030820494.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:90469-90541:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:90208-90285:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:89918-90105:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:88885-89064:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:88705-88801:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:87693-87815:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:87345-87500:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:86850-86969:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:86294-86446:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:85599-85774:-1:exon

LOC115912956
type: Gene
subclass of: SO_0000704
RO_0002162: 87175
gene: LOC115912956
note: Derived by automated computational analysis using gene prediction method: cmsearch.
so part of: sequence
location: complement(93484..93688)
location: region:93484-93688:-1
so has part: feature:93484-93688:-1:exon
subclass of: SO_0000578

115912956
type: Gene
SIO_000068: ncbigene

position:93484:-1
position: 93484
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:93688:-1
position: 93688
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:93484-93688:-1:exon

LOC115912956
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 87175
nc RNA class: snoRNA
gene: LOC115912956
product: small nucleolar RNA SNORA73 family
inference: COORDINATES: nucleotide motif:Rfam:12.0:RF00045
inference: COORDINATES: profile:INFERNAL:1.1.1
note: Derived by automated computational analysis using gene prediction method: cmsearch.
transcript id: XR_004061358.1
SIO_010081: LOC115912956
subclass of: SO_0000673
so part of: LOC115912956
location: complement(93484..93688)
location: region:93484-93688:-1
so has part: feature:93484-93688:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:93484-93688:-1:exon

PHACTR4
type: Gene
subclass of: SO_0000704
RO_0002162: 87175
gene: PHACTR4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(95018..143445)
location: region:95018-143445:-1
so has part: feature:95018-143445:-1:exon
subclass of: SO_0000010

115912845
type: Gene
SIO_000068: ncbigene

position:95018:-1
position: 95018
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:143445:-1
position: 143445
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:95018-143445:-1:exon

PHACTR4
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 87175
gene: PHACTR4
product: phosphatase and actin regulator 4, transcript variant X5
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 ESTs, 7 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_030964615.1
SIO_010081: PHACTR4
subclass of: SO_0000673
so part of: PHACTR4
location: complement(join(95018..95633,96196..96272,97172..97309,98050..98111,98956..99011,99607..99757,100201..100424,101022..101604,104474..104833,104962..105126,106709..106789,107214..107390,143193..143445))
location: region:95018-143445:-1
so has part: feature:143193-143445:-1:exon
so has part: feature:107214-107390:-1:exon
so has part: feature:106709-106789:-1:exon
so has part: feature:104962-105126:-1:exon
so has part: feature:104474-104833:-1:exon
so has part: feature:101022-101604:-1:exon
so has part: feature:100201-100424:-1:exon
so has part: feature:99607-99757:-1:exon
so has part: feature:98956-99011:-1:exon
so has part: feature:98050-98111:-1:exon
so has part: feature:97172-97309:-1:exon
so has part: feature:96196-96272:-1:exon
so has part: feature:95018-95633:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:143193-143445:-1:exon

position:143193:-1
position: 143193
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:107214-107390:-1:exon

position:107214:-1
position: 107214
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:107390:-1
position: 107390
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:106709-106789:-1:exon

position:106709:-1
position: 106709
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:106789:-1
position: 106789
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:104962-105126:-1:exon

position:104962:-1
position: 104962
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:105126:-1
position: 105126
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:104474-104833:-1:exon

position:104474:-1
position: 104474
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:104833:-1
position: 104833
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:101022-101604:-1:exon

position:101022:-1
position: 101022
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:101604:-1
position: 101604
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:100201-100424:-1:exon

position:100201:-1
position: 100201
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:100424:-1
position: 100424
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:99607-99757:-1:exon

position:99607:-1
position: 99607
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:99757:-1
position: 99757
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:98956-99011:-1:exon

position:98956:-1
position: 98956
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:99011:-1
position: 99011
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:98050-98111:-1:exon

position:98050:-1
position: 98050
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:98111:-1
position: 98111
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:97172-97309:-1:exon

position:97172:-1
position: 97172
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:97309:-1
position: 97309
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:96196-96272:-1:exon

position:96196:-1
position: 96196
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:96272:-1
position: 96272
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:95018-95633:-1:exon

position:95633:-1
position: 95633
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

PHACTR4
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 87175
gene: PHACTR4
product: phosphatase and actin regulator 4, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 ESTs, 7 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_030964611.1
SIO_010081: PHACTR4
subclass of: SO_0000673
so part of: PHACTR4
location: complement(join(95018..95633,96196..96272,97172..97309,98050..98111,98956..99011,99607..99757,100201..100424,101022..101604,104474..104833,104962..105126,106709..106789,107214..107390,126115..126161,143193..143304))
location: region:95018-143304:-1
so has part: feature:143193-143304:-1:exon
so has part: feature:126115-126161:-1:exon
so has part: feature:107214-107390:-1:exon
so has part: feature:106709-106789:-1:exon
so has part: feature:104962-105126:-1:exon
so has part: feature:104474-104833:-1:exon
so has part: feature:101022-101604:-1:exon
so has part: feature:100201-100424:-1:exon
so has part: feature:99607-99757:-1:exon
so has part: feature:98956-99011:-1:exon
so has part: feature:98050-98111:-1:exon
so has part: feature:97172-97309:-1:exon
so has part: feature:96196-96272:-1:exon
so has part: feature:95018-95633:-1:exon

position:143304:-1
position: 143304
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:143193-143304:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:126115-126161:-1:exon

position:126115:-1
position: 126115
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:126161:-1
position: 126161
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:107214-107390:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:106709-106789:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:104962-105126:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:104474-104833:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:101022-101604:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:100201-100424:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:99607-99757:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:98956-99011:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:98050-98111:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:97172-97309:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:96196-96272:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:95018-95633:-1:exon

PHACTR4
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 87175
gene: PHACTR4
product: phosphatase and actin regulator 4, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 ESTs, 6 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_030964612.1
SIO_010081: PHACTR4
subclass of: SO_0000673
so part of: PHACTR4
location: complement(join(95018..95633,96196..96272,97172..97309,98050..98111,98956..99011,99607..99757,100201..100424,101022..101604,104474..104833,104962..105126,106709..106789,107214..107390,123874..123957))
location: region:95018-123957:-1
so has part: feature:123874-123957:-1:exon
so has part: feature:107214-107390:-1:exon
so has part: feature:106709-106789:-1:exon
so has part: feature:104962-105126:-1:exon
so has part: feature:104474-104833:-1:exon
so has part: feature:101022-101604:-1:exon
so has part: feature:100201-100424:-1:exon
so has part: feature:99607-99757:-1:exon
so has part: feature:98956-99011:-1:exon
so has part: feature:98050-98111:-1:exon
so has part: feature:97172-97309:-1:exon
so has part: feature:96196-96272:-1:exon
so has part: feature:95018-95633:-1:exon

position:123957:-1
position: 123957
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:123874-123957:-1:exon

position:123874:-1
position: 123874
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:107214-107390:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:106709-106789:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:104962-105126:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:104474-104833:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:101022-101604:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:100201-100424:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:99607-99757:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:98956-99011:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:98050-98111:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:97172-97309:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:96196-96272:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:95018-95633:-1:exon

PHACTR4
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 87175
gene: PHACTR4
product: phosphatase and actin regulator 4, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 ESTs, 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XM_030964614.1
SIO_010081: PHACTR4
subclass of: SO_0000673
so part of: PHACTR4
location: complement(join(95018..95633,96196..96272,97172..97309,98050..98111,98956..99011,99607..99757,100201..100424,101022..101604,104474..104833,104962..105126,107214..107390,113134..113431))
location: region:95018-113431:-1
so has part: feature:113134-113431:-1:exon
so has part: feature:107214-107390:-1:exon
so has part: feature:104962-105126:-1:exon
so has part: feature:104474-104833:-1:exon
so has part: feature:101022-101604:-1:exon
so has part: feature:100201-100424:-1:exon
so has part: feature:99607-99757:-1:exon
so has part: feature:98956-99011:-1:exon
so has part: feature:98050-98111:-1:exon
so has part: feature:97172-97309:-1:exon
so has part: feature:96196-96272:-1:exon
so has part: feature:95018-95633:-1:exon

position:113431:-1
position: 113431
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:113134-113431:-1:exon

position:113134:-1
position: 113134
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:107214-107390:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:104962-105126:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:104474-104833:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:101022-101604:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:100201-100424:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:99607-99757:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:98956-99011:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:98050-98111:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:97172-97309:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:96196-96272:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:95018-95633:-1:exon

PHACTR4
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 87175
gene: PHACTR4
product: phosphatase and actin regulator 4, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 ESTs, 8 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XM_030964610.1
SIO_010081: PHACTR4
subclass of: SO_0000673
so part of: PHACTR4
location: complement(join(95018..95633,96196..96272,97172..97309,98050..98111,98956..99011,99607..99757,100201..100424,101022..101604,104474..104833,104962..105126,106709..106789,107214..107390,113134..113431))
location: region:95018-113431:-1
so has part: feature:113134-113431:-1:exon
so has part: feature:107214-107390:-1:exon
so has part: feature:106709-106789:-1:exon
so has part: feature:104962-105126:-1:exon
so has part: feature:104474-104833:-1:exon
so has part: feature:101022-101604:-1:exon
so has part: feature:100201-100424:-1:exon
so has part: feature:99607-99757:-1:exon
so has part: feature:98956-99011:-1:exon
so has part: feature:98050-98111:-1:exon
so has part: feature:97172-97309:-1:exon
so has part: feature:96196-96272:-1:exon
so has part: feature:95018-95633:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:113134-113431:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:107214-107390:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:106709-106789:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:104962-105126:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:104474-104833:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:101022-101604:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:100201-100424:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:99607-99757:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:98956-99011:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:98050-98111:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:97172-97309:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:96196-96272:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:95018-95633:-1:exon

PHACTR4
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 87175
gene: PHACTR4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: phosphatase and actin regulator 4 isoform X2
translation: MEENAAEDVDHAPGDASMGVDVLESGDTTPPTKRKSKFSSFGKIFKPWKWRKKKSSDKFKETSEVLERKISMRKPREELVKRGVLLEEPEQDAEEPEKLNPPALKNGHTVPIGGPGLCNLPSQEEEATKPPSLRKPVPVEEPKKRQGSSSSHPGPELEPPQEPHVPRQPLLPPKRPPSTSQEANEVQAKDPIPASSTARTAPFSTAPTAAKTVNSTAAPSPAPRTLLPAPASANTTAPTSTTSTAPAKQPPVPPPKPVNRNSNSLIAELSQVMTSGTALSKPSPPLPPKRGLLPNNTSEAVTSKPPNDRTVTGSRPAPIPVHVTSAYPPPSPSPPLPTHVPPEPPGVALPTSTPVLDPPCSLDLPKEIPPPPLPEDFRSMEVLKRTAEQGFGEPHVLPRLPQIPLHIRIQQALASPLPVTPPPEGSHRAHSLLFENDGFGEDNGTLGRTRSLPVTIEMLKVPDDEEGEDDDQEEEQNSDPRVYIGDVPSVTVIPKLVPQVLPEEQEGDEGMSDSDSEGPILYKDDEDEEEDESHNSTLANKVKRKDTLAIKLGNTTAPQEEKSIFPRKSKEEWNEIRHQIGTTLIRRLSQRPTAEELEQRNILQPKNEADRQAEKREIKRRLTRKLSQRPTVAELQARKILRFNEYVEVTDAQDYDRRADKPWTKLTPADKAAIRKELNEFKSCEMEVHEESKQFTRYHRP
SIO_010081: PHACTR4
subclass of: SO_0000673
so part of: PHACTR4
location: complement(join(95618..95633,96196..96272,97172..97309,98050..98111,98956..99011,99607..99757,100201..100424,101022..101604,104474..104833,104962..105126,106709..106789,107214..107390,126115..126130))
location: region:95618-126130:-1
so has part: feature:126115-126130:-1:exon
so has part: feature:107214-107390:-1:exon
so has part: feature:106709-106789:-1:exon
so has part: feature:104962-105126:-1:exon
so has part: feature:104474-104833:-1:exon
so has part: feature:101022-101604:-1:exon
so has part: feature:100201-100424:-1:exon
so has part: feature:99607-99757:-1:exon
so has part: feature:98956-99011:-1:exon
so has part: feature:98050-98111:-1:exon
so has part: feature:97172-97309:-1:exon
so has part: feature:96196-96272:-1:exon
so has part: feature:95618-95633:-1:exon

XP_030820471.1
type: Protein
SIO_000068: ncbiprotein

position:95618:-1
position: 95618
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:126130:-1
position: 126130
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:126115-126130:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:107214-107390:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:106709-106789:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:104962-105126:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:104474-104833:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:101022-101604:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:100201-100424:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:99607-99757:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:98956-99011:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:98050-98111:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:97172-97309:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:96196-96272:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:95618-95633:-1:exon

PHACTR4
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 87175
gene: PHACTR4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: phosphatase and actin regulator 4 isoform X4
translation: MGQPHFSRPVNPGAFAEDVDHAPGDASMGVDVLESGDTTPPTKRKSKFSSFGKIFKPWKWRKKKSSDKFKETSEDAEEPEKLNPPALKNGHTVPIGGPGLCNLPSQEEEATKPPSLRKPVPVEEPKKRQGSSSSHPGPELEPPQEPHVPRQPLLPPKRPPSTSQEANEVQAKDPIPASSTARTAPFSTAPTAAKTVNSTAAPSPAPRTLLPAPASANTTAPTSTTSTAPAKQPPVPPPKPVNRNSNSLIAELSQVMTSGTALSKPSPPLPPKRGLLPNNTSEAVTSKPPNDRTVTGSRPAPIPVHVTSAYPPPSPSPPLPTHVPPEPPGVALPTSTPVLDPPCSLDLPKEIPPPPLPEDFRSMEVLKRTAEQGFGEPHVLPRLPQIPLHIRIQQALASPLPVTPPPEGSHRAHSLLFENDGFGEDNGTLGRTRSLPVTIEMLKVPDDEEGEDDDQEEEQNSDPRVYIGDVPSVTVIPKLVPQVLPEEQEGDEGMSDSDSEGPILYKDDEDEEEDESHNSTLANKVKRKDTLAIKLGNTTAPQEEKSIFPRKSKEEWNEIRHQIGTTLIRRLSQRPTAEELEQRNILQPKNEADRQAEKREIKRRLTRKLSQRPTVAELQARKILRFNEYVEVTDAQDYDRRADKPWTKLTPADKAAIRKELNEFKSCEMEVHEESKQFTRYHRP
SIO_010081: PHACTR4
subclass of: SO_0000673
so part of: PHACTR4
location: complement(join(95618..95633,96196..96272,97172..97309,98050..98111,98956..99011,99607..99757,100201..100424,101022..101604,104474..104833,104962..105126,107214..107390,113134..113179))
location: region:95618-113179:-1
so has part: feature:113134-113179:-1:exon
so has part: feature:107214-107390:-1:exon
so has part: feature:104962-105126:-1:exon
so has part: feature:104474-104833:-1:exon
so has part: feature:101022-101604:-1:exon
so has part: feature:100201-100424:-1:exon
so has part: feature:99607-99757:-1:exon
so has part: feature:98956-99011:-1:exon
so has part: feature:98050-98111:-1:exon
so has part: feature:97172-97309:-1:exon
so has part: feature:96196-96272:-1:exon
so has part: feature:95618-95633:-1:exon

XP_030820474.1
type: Protein
SIO_000068: ncbiprotein

position:113179:-1
position: 113179
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:113134-113179:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:107214-107390:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:104962-105126:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:104474-104833:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:101022-101604:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:100201-100424:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:99607-99757:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:98956-99011:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:98050-98111:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:97172-97309:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:96196-96272:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:95618-95633:-1:exon

PHACTR4
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 87175
gene: PHACTR4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: phosphatase and actin regulator 4 isoform X1
translation: MGQPHFSRPVNPGAFAEDVDHAPGDASMGVDVLESGDTTPPTKRKSKFSSFGKIFKPWKWRKKKSSDKFKETSEVLERKISMRKPREELVKRGVLLEEPEQDAEEPEKLNPPALKNGHTVPIGGPGLCNLPSQEEEATKPPSLRKPVPVEEPKKRQGSSSSHPGPELEPPQEPHVPRQPLLPPKRPPSTSQEANEVQAKDPIPASSTARTAPFSTAPTAAKTVNSTAAPSPAPRTLLPAPASANTTAPTSTTSTAPAKQPPVPPPKPVNRNSNSLIAELSQVMTSGTALSKPSPPLPPKRGLLPNNTSEAVTSKPPNDRTVTGSRPAPIPVHVTSAYPPPSPSPPLPTHVPPEPPGVALPTSTPVLDPPCSLDLPKEIPPPPLPEDFRSMEVLKRTAEQGFGEPHVLPRLPQIPLHIRIQQALASPLPVTPPPEGSHRAHSLLFENDGFGEDNGTLGRTRSLPVTIEMLKVPDDEEGEDDDQEEEQNSDPRVYIGDVPSVTVIPKLVPQVLPEEQEGDEGMSDSDSEGPILYKDDEDEEEDESHNSTLANKVKRKDTLAIKLGNTTAPQEEKSIFPRKSKEEWNEIRHQIGTTLIRRLSQRPTAEELEQRNILQPKNEADRQAEKREIKRRLTRKLSQRPTVAELQARKILRFNEYVEVTDAQDYDRRADKPWTKLTPADKAAIRKELNEFKSCEMEVHEESKQFTRYHRP
SIO_010081: PHACTR4
subclass of: SO_0000673
so part of: PHACTR4
location: complement(join(95618..95633,96196..96272,97172..97309,98050..98111,98956..99011,99607..99757,100201..100424,101022..101604,104474..104833,104962..105126,106709..106789,107214..107390,113134..113179))
location: region:95618-113179:-1
so has part: feature:113134-113179:-1:exon
so has part: feature:107214-107390:-1:exon
so has part: feature:106709-106789:-1:exon
so has part: feature:104962-105126:-1:exon
so has part: feature:104474-104833:-1:exon
so has part: feature:101022-101604:-1:exon
so has part: feature:100201-100424:-1:exon
so has part: feature:99607-99757:-1:exon
so has part: feature:98956-99011:-1:exon
so has part: feature:98050-98111:-1:exon
so has part: feature:97172-97309:-1:exon
so has part: feature:96196-96272:-1:exon
so has part: feature:95618-95633:-1:exon

XP_030820470.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:113134-113179:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:107214-107390:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:106709-106789:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:104962-105126:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:104474-104833:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:101022-101604:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:100201-100424:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:99607-99757:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:98956-99011:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:98050-98111:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:97172-97309:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:96196-96272:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:95618-95633:-1:exon

PHACTR4
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 87175
gene: PHACTR4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: phosphatase and actin regulator 4 isoform X3
translation: MGVDVLESGDTTPPTKRKSKFSSFGKIFKPWKWRKKKSSDKFKETSEVLERKISMRKPREELVKRGVLLEEPEQDAEEPEKLNPPALKNGHTVPIGGPGLCNLPSQEEEATKPPSLRKPVPVEEPKKRQGSSSSHPGPELEPPQEPHVPRQPLLPPKRPPSTSQEANEVQAKDPIPASSTARTAPFSTAPTAAKTVNSTAAPSPAPRTLLPAPASANTTAPTSTTSTAPAKQPPVPPPKPVNRNSNSLIAELSQVMTSGTALSKPSPPLPPKRGLLPNNTSEAVTSKPPNDRTVTGSRPAPIPVHVTSAYPPPSPSPPLPTHVPPEPPGVALPTSTPVLDPPCSLDLPKEIPPPPLPEDFRSMEVLKRTAEQGFGEPHVLPRLPQIPLHIRIQQALASPLPVTPPPEGSHRAHSLLFENDGFGEDNGTLGRTRSLPVTIEMLKVPDDEEGEDDDQEEEQNSDPRVYIGDVPSVTVIPKLVPQVLPEEQEGDEGMSDSDSEGPILYKDDEDEEEDESHNSTLANKVKRKDTLAIKLGNTTAPQEEKSIFPRKSKEEWNEIRHQIGTTLIRRLSQRPTAEELEQRNILQPKNEADRQAEKREIKRRLTRKLSQRPTVAELQARKILRFNEYVEVTDAQDYDRRADKPWTKLTPADKAAIRKELNEFKSCEMEVHEESKQFTRYHRP
SIO_010081: PHACTR4
subclass of: SO_0000673
so part of: PHACTR4
location: complement(join(95618..95633,96196..96272,97172..97309,98050..98111,98956..99011,99607..99757,100201..100424,101022..101604,104474..104833,104962..105126,106709..106789,107214..107355))
location: region:95618-107355:-1
so has part: feature:107214-107355:-1:exon
so has part: feature:106709-106789:-1:exon
so has part: feature:104962-105126:-1:exon
so has part: feature:104474-104833:-1:exon
so has part: feature:101022-101604:-1:exon
so has part: feature:100201-100424:-1:exon
so has part: feature:99607-99757:-1:exon
so has part: feature:98956-99011:-1:exon
so has part: feature:98050-98111:-1:exon
so has part: feature:97172-97309:-1:exon
so has part: feature:96196-96272:-1:exon
so has part: feature:95618-95633:-1:exon

XP_030820472.1
type: Protein
SIO_000068: ncbiprotein

position:107355:-1
position: 107355
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:107214-107355:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:106709-106789:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:104962-105126:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:104474-104833:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:101022-101604:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:100201-100424:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:99607-99757:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:98956-99011:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:98050-98111:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:97172-97309:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:96196-96272:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:95618-95633:-1:exon

PHACTR4
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 87175
gene: PHACTR4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: phosphatase and actin regulator 4 isoform X3
translation: MGVDVLESGDTTPPTKRKSKFSSFGKIFKPWKWRKKKSSDKFKETSEVLERKISMRKPREELVKRGVLLEEPEQDAEEPEKLNPPALKNGHTVPIGGPGLCNLPSQEEEATKPPSLRKPVPVEEPKKRQGSSSSHPGPELEPPQEPHVPRQPLLPPKRPPSTSQEANEVQAKDPIPASSTARTAPFSTAPTAAKTVNSTAAPSPAPRTLLPAPASANTTAPTSTTSTAPAKQPPVPPPKPVNRNSNSLIAELSQVMTSGTALSKPSPPLPPKRGLLPNNTSEAVTSKPPNDRTVTGSRPAPIPVHVTSAYPPPSPSPPLPTHVPPEPPGVALPTSTPVLDPPCSLDLPKEIPPPPLPEDFRSMEVLKRTAEQGFGEPHVLPRLPQIPLHIRIQQALASPLPVTPPPEGSHRAHSLLFENDGFGEDNGTLGRTRSLPVTIEMLKVPDDEEGEDDDQEEEQNSDPRVYIGDVPSVTVIPKLVPQVLPEEQEGDEGMSDSDSEGPILYKDDEDEEEDESHNSTLANKVKRKDTLAIKLGNTTAPQEEKSIFPRKSKEEWNEIRHQIGTTLIRRLSQRPTAEELEQRNILQPKNEADRQAEKREIKRRLTRKLSQRPTVAELQARKILRFNEYVEVTDAQDYDRRADKPWTKLTPADKAAIRKELNEFKSCEMEVHEESKQFTRYHRP
SIO_010081: PHACTR4
subclass of: SO_0000673
so part of: PHACTR4
location: complement(join(95618..95633,96196..96272,97172..97309,98050..98111,98956..99011,99607..99757,100201..100424,101022..101604,104474..104833,104962..105126,106709..106789,107214..107355))
location: region:95618-107355:-1
so has part: feature:107214-107355:-1:exon
so has part: feature:106709-106789:-1:exon
so has part: feature:104962-105126:-1:exon
so has part: feature:104474-104833:-1:exon
so has part: feature:101022-101604:-1:exon
so has part: feature:100201-100424:-1:exon
so has part: feature:99607-99757:-1:exon
so has part: feature:98956-99011:-1:exon
so has part: feature:98050-98111:-1:exon
so has part: feature:97172-97309:-1:exon
so has part: feature:96196-96272:-1:exon
so has part: feature:95618-95633:-1:exon

XP_030820475.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:107214-107355:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:106709-106789:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:104962-105126:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:104474-104833:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:101022-101604:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:100201-100424:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:99607-99757:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:98956-99011:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:98050-98111:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:97172-97309:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:96196-96272:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:95618-95633:-1:exon

SESN2
type: Gene
subclass of: SO_0000704
RO_0002162: 87175
gene: SESN2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(145329..151717)
location: region:145329-151717:-1
so has part: feature:145329-151717:-1:exon
subclass of: SO_0000010

115912846
type: Gene
SIO_000068: ncbigene

position:145329:-1
position: 145329
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:151717:-1
position: 151717
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:145329-151717:-1:exon

SESN2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 87175
gene: SESN2
product: sestrin 2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 22 Proteins, and 96% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_030964616.1
SIO_010081: SESN2
subclass of: SO_0000673
so part of: SESN2
location: complement(join(145329..146295,146382..146526,147204..147418,147756..147871,148036..148186,148918..149127,149388..149570,149918..150112,150892..150957,151591..151717))
location: region:145329-151717:-1
so has part: feature:151591-151717:-1:exon
so has part: feature:150892-150957:-1:exon
so has part: feature:149918-150112:-1:exon
so has part: feature:149388-149570:-1:exon
so has part: feature:148918-149127:-1:exon
so has part: feature:148036-148186:-1:exon
so has part: feature:147756-147871:-1:exon
so has part: feature:147204-147418:-1:exon
so has part: feature:146382-146526:-1:exon
so has part: feature:145329-146295:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:151591-151717:-1:exon

position:151591:-1
position: 151591
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:150892-150957:-1:exon

position:150892:-1
position: 150892
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:150957:-1
position: 150957
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:149918-150112:-1:exon

position:149918:-1
position: 149918
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:150112:-1
position: 150112
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:149388-149570:-1:exon

position:149388:-1
position: 149388
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:149570:-1
position: 149570
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:148918-149127:-1:exon

position:148918:-1
position: 148918
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:149127:-1
position: 149127
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:148036-148186:-1:exon

position:148036:-1
position: 148036
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:148186:-1
position: 148186
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:147756-147871:-1:exon

position:147756:-1
position: 147756
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:147871:-1
position: 147871
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:147204-147418:-1:exon

position:147204:-1
position: 147204
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:147418:-1
position: 147418
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:146382-146526:-1:exon

position:146382:-1
position: 146382
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:146526:-1
position: 146526
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:145329-146295:-1:exon

position:146295:-1
position: 146295
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

SESN2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 87175
gene: SESN2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: sestrin-2
translation: MLVAGSPCSPAGPEEHRGCGARRGGQERGIEAARELARGPSAFIPVGEIPQEGGESSLHQLLEAFVSAGRVDHVAMVMGLHPQYLSSFWKTQYLLLRMDGPLPYHKRHYIAIMAAARHRCSYLVGLHMREFLQVGGSPAWLQGLHCAPQKLRNLNEINKLLAHRPWLVTKEHIEALLRPGQDSWSLAELVQALVLLTHYHSLASFVFGCGIRPEGEQDLGSSCWPPSPHSNRSPASGDSMGGSGGTDAMQEVEVLMERMKLLQENQLEEEGVTQEEMATRFELEKTESLLVPSSDILDPSLQSNIRCFLEDPEFGYKDFTRRGEQAPPTFRAQDYTWEDHGYSLINRLYPDVGQLLDEKFQVVYNLTYNTIAMHCGVDTSVLLGRQSIWFFQPTVHCGLLLGGIRYDDYDYGEVNQLLERNLKVYIKTVACYPERTTKQIYAQFWRHFKHSEKVHINLLLLEARMQAALLYALRAVTRYMT
SIO_010081: SESN2
subclass of: SO_0000673
so part of: SESN2
location: complement(join(146209..146295,146382..146526,147204..147418,147756..147871,148036..148186,148918..149127,149388..149570,149918..150112,150892..150957,151591..151668))
location: region:146209-151668:-1
so has part: feature:151591-151668:-1:exon
so has part: feature:150892-150957:-1:exon
so has part: feature:149918-150112:-1:exon
so has part: feature:149388-149570:-1:exon
so has part: feature:148918-149127:-1:exon
so has part: feature:148036-148186:-1:exon
so has part: feature:147756-147871:-1:exon
so has part: feature:147204-147418:-1:exon
so has part: feature:146382-146526:-1:exon
so has part: feature:146209-146295:-1:exon

XP_030820476.1
type: Protein
SIO_000068: ncbiprotein

position:146209:-1
position: 146209
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:151668:-1
position: 151668
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:151591-151668:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:150892-150957:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:149918-150112:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:149388-149570:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:148918-149127:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:148036-148186:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:147756-147871:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:147204-147418:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:146382-146526:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:146209-146295:-1:exon

FAM76A
type: Gene
subclass of: SO_0000704
RO_0002162: 87175
gene: FAM76A
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(154846..169182)
location: region:154846-169182:-1
so has part: feature:154846-169182:-1:exon
subclass of: SO_0000010

115912937
type: Gene
SIO_000068: ncbigene

position:154846:-1
position: 154846
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:169182:-1
position: 169182
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:154846-169182:-1:exon

FAM76A
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 87175
gene: FAM76A
product: family with sequence similarity 76 member A, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 11 ESTs, 5 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
transcript id: XM_030964744.1
SIO_010081: FAM76A
subclass of: SO_0000673
so part of: FAM76A
location: complement(join(154846..156716,158043..158144,158600..158735,164807..164893,165293..165450,166307..166459,167127..167181,167979..168043,169065..169182))
location: region:154846-169182:-1
so has part: feature:169065-169182:-1:exon
so has part: feature:167979-168043:-1:exon
so has part: feature:167127-167181:-1:exon
so has part: feature:166307-166459:-1:exon
so has part: feature:165293-165450:-1:exon
so has part: feature:164807-164893:-1:exon
so has part: feature:158600-158735:-1:exon
so has part: feature:158043-158144:-1:exon
so has part: feature:154846-156716:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:169065-169182:-1:exon

position:169065:-1
position: 169065
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:167979-168043:-1:exon

position:167979:-1
position: 167979
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:168043:-1
position: 168043
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:167127-167181:-1:exon

position:167127:-1
position: 167127
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:167181:-1
position: 167181
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:166307-166459:-1:exon

position:166307:-1
position: 166307
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:166459:-1
position: 166459
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:165293-165450:-1:exon

position:165293:-1
position: 165293
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:165450:-1
position: 165450
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:164807-164893:-1:exon

position:164807:-1
position: 164807
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:164893:-1
position: 164893
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:158600-158735:-1:exon

position:158600:-1
position: 158600
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:158735:-1
position: 158735
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:158043-158144:-1:exon

position:158043:-1
position: 158043
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:158144:-1
position: 158144
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:154846-156716:-1:exon

position:156716:-1
position: 156716
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

FAM76A
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 87175
gene: FAM76A
product: family with sequence similarity 76 member A, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 7 ESTs, 1 Protein, and 99% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
transcript id: XM_030964743.1
SIO_010081: FAM76A
subclass of: SO_0000673
so part of: FAM76A
location: complement(join(154846..156716,158043..158144,158600..158735,163869..164000,164807..164893,165293..165450,166307..166459,167127..167181,167979..168043,169065..169182))
location: region:154846-169182:-1
so has part: feature:169065-169182:-1:exon
so has part: feature:167979-168043:-1:exon
so has part: feature:167127-167181:-1:exon
so has part: feature:166307-166459:-1:exon
so has part: feature:165293-165450:-1:exon
so has part: feature:164807-164893:-1:exon
so has part: feature:163869-164000:-1:exon
so has part: feature:158600-158735:-1:exon
so has part: feature:158043-158144:-1:exon
so has part: feature:154846-156716:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:169065-169182:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:167979-168043:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:167127-167181:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:166307-166459:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:165293-165450:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:164807-164893:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:163869-164000:-1:exon

position:163869:-1
position: 163869
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:164000:-1
position: 164000
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:158600-158735:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:158043-158144:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:154846-156716:-1:exon

FAM76A
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 87175
gene: FAM76A
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protein FAM76A isoform X2
translation: MAALYACTKCHQRFPFEALSQGQQLCKECRIAHPIVKCTYCRTEFQQESKTNTICKKCAQNVKLYGTPKPCQYCNIIAAFIGNKCQRCTNSEKKYGPPHSCEQCKQQCAFDRKDDRKKVDGKLLCWLCTLSYKRVLQKTKEQCKHLSSSSRGSLQEKEQFSRLSSGSHYNSQKTLSTSSIQNEIPKKKAKFDAISANGDSFSPDLALDSPGTDHFVIIAQLKEEVATLKKMLHQKDQMILEKEKKITELKADLQYQESQMRAKMNQMEKTHKEVMEQLQAKNRELLKQAAALSKGKKPEKSGAITSP
SIO_010081: FAM76A
subclass of: SO_0000673
so part of: FAM76A
location: complement(join(156630..156716,158043..158144,158600..158735,164807..164893,165293..165450,166307..166459,167127..167181,167979..168043,169065..169145))
location: region:156630-169145:-1
so has part: feature:169065-169145:-1:exon
so has part: feature:167979-168043:-1:exon
so has part: feature:167127-167181:-1:exon
so has part: feature:166307-166459:-1:exon
so has part: feature:165293-165450:-1:exon
so has part: feature:164807-164893:-1:exon
so has part: feature:158600-158735:-1:exon
so has part: feature:158043-158144:-1:exon
so has part: feature:156630-156716:-1:exon

XP_030820604.1
type: Protein
SIO_000068: ncbiprotein

position:156630:-1
position: 156630
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:169145:-1
position: 169145
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:169065-169145:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:167979-168043:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:167127-167181:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:166307-166459:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:165293-165450:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:164807-164893:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:158600-158735:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:158043-158144:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:156630-156716:-1:exon

FAM76A
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 87175
gene: FAM76A
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protein FAM76A isoform X1
translation: MAALYACTKCHQRFPFEALSQGQQLCKECRIAHPIVKCTYCRTEFQQESKTNTICKKCAQNVKLYGTPKPCQYCNIIAAFIGNKCQRCTNSEKKYGPPHSCEQCKQQCAFDRKDDRKKVDGKLLCWLCTLSYKRVLQKTKEQCKHLSSSSRGSLQEKEQFSRLSSGSHYNSQKTLSTSSIQNEIPKKKAKFDAISANGDSVPSSPEMLCPLIQRAPSTLAQWAASQQTLGAHHCPVAQGIDILNFSPDLALDSPGTDHFVIIAQLKEEVATLKKMLHQKDQMILEKEKKITELKADLQYQESQMRAKMNQMEKTHKEVMEQLQAKNRELLKQAAALSKGKKPEKSGAITSP
SIO_010081: FAM76A
subclass of: SO_0000673
so part of: FAM76A
location: complement(join(156630..156716,158043..158144,158600..158735,163869..164000,164807..164893,165293..165450,166307..166459,167127..167181,167979..168043,169065..169145))
location: region:156630-169145:-1
so has part: feature:169065-169145:-1:exon
so has part: feature:167979-168043:-1:exon
so has part: feature:167127-167181:-1:exon
so has part: feature:166307-166459:-1:exon
so has part: feature:165293-165450:-1:exon
so has part: feature:164807-164893:-1:exon
so has part: feature:163869-164000:-1:exon
so has part: feature:158600-158735:-1:exon
so has part: feature:158043-158144:-1:exon
so has part: feature:156630-156716:-1:exon

XP_030820603.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:169065-169145:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:167979-168043:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:167127-167181:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:166307-166459:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:165293-165450:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:164807-164893:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:163869-164000:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:158600-158735:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:158043-158144:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:156630-156716:-1:exon

LOC115912903
type: Gene
subclass of: SO_0000704
RO_0002162: 87175
gene: LOC115912903
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(174838..180336)
location: region:174838-180336:-1
so has part: feature:174838-180336:-1:exon
subclass of: SO_0000010

115912903
type: Gene
SIO_000068: ncbigene

position:174838:-1
position: 174838
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:180336:-1
position: 180336
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:174838-180336:-1:exon

LOC115912903
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 87175
gene: LOC115912903
product: digestive cysteine proteinase 1-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 7 Proteins, and 88% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_030964695.1
SIO_010081: LOC115912903
subclass of: SO_0000673
so part of: LOC115912903
location: complement(join(174838..175025,175340..175529,176105..176266,176350..176441,177066..177259,177342..177534,177606..177849,178551..178723,178800..178892,179161..179220,180270..180336))
location: region:174838-180336:-1
so has part: feature:180270-180336:-1:exon
so has part: feature:179161-179220:-1:exon
so has part: feature:178800-178892:-1:exon
so has part: feature:178551-178723:-1:exon
so has part: feature:177606-177849:-1:exon
so has part: feature:177342-177534:-1:exon
so has part: feature:177066-177259:-1:exon
so has part: feature:176350-176441:-1:exon
so has part: feature:176105-176266:-1:exon
so has part: feature:175340-175529:-1:exon
so has part: feature:174838-175025:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:180270-180336:-1:exon

position:180270:-1
position: 180270
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:179161-179220:-1:exon

position:179161:-1
position: 179161
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:179220:-1
position: 179220
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:178800-178892:-1:exon

position:178800:-1
position: 178800
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:178892:-1
position: 178892
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:178551-178723:-1:exon

position:178551:-1
position: 178551
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:178723:-1
position: 178723
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:177606-177849:-1:exon

position:177606:-1
position: 177606
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:177849:-1
position: 177849
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:177342-177534:-1:exon

position:177342:-1
position: 177342
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:177534:-1
position: 177534
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:177066-177259:-1:exon

position:177066:-1
position: 177066
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:177259:-1
position: 177259
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:176350-176441:-1:exon

position:176350:-1
position: 176350
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:176441:-1
position: 176441
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:176105-176266:-1:exon

position:176105:-1
position: 176105
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:176266:-1
position: 176266
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:175340-175529:-1:exon

position:175340:-1
position: 175340
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:175529:-1
position: 175529
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:174838-175025:-1:exon

position:175025:-1
position: 175025
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC115912903
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 87175
gene: LOC115912903
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: digestive cysteine proteinase 1-like
translation: MGALRWLLLSALCIAVRGQDYGLSRPPPQFGSIYHVRGVIKLPYAEIEEPFEAWYNLTGNKSRIQYYGGQVITYQLAAVKPYGMRYKITPETTEKEVNTRKCFQLPGSKEDVVTAQSVFPSMRGFKFLREEYYEGRYCAVWQNVTRWAQKKNVYTLWVTNSSCGVAPVHYEMRGYNSLLGSHYDKYEIAYTDFDNSYPPSVFDLPVNETKCGVLPGTVAEHRVLANPMEDLVGQHQPWAHRVFHEYRRQLGRRYGSARELEHRQSIFVHNMRFVHSRNRAALSYTLSLNHLADRTPQELAALRGRRRSGTPNHGLPFPTELYAGIILPESLDWRMYGAVTPVKDQAVCGSCWSFATTGAMEGALFLKTGVLTPLSQQVLIDCSWGFGNFACDGGEEWRAYEWIKKHGGIASTESYGTYKGQNGLCHYNQSEMLAKITGYVNVTSGNITAVKAAIYKHGPVAVSIDASHKSFSFYSNGIYYEPKCDNTPGSLDHAVLAVGYGVLQGETYWLIKNSWSTYWGNDGYILMAMKDNNCGVATEATYPILA
SIO_010081: LOC115912903
subclass of: SO_0000673
so part of: LOC115912903
location: complement(join(174838..175025,175340..175529,176105..176266,176350..176441,177066..177259,177342..177534,177606..177849,178551..178723,178800..178892,179161..179220,180270..180321))
location: region:174838-180321:-1
so has part: feature:180270-180321:-1:exon
so has part: feature:179161-179220:-1:exon
so has part: feature:178800-178892:-1:exon
so has part: feature:178551-178723:-1:exon
so has part: feature:177606-177849:-1:exon
so has part: feature:177342-177534:-1:exon
so has part: feature:177066-177259:-1:exon
so has part: feature:176350-176441:-1:exon
so has part: feature:176105-176266:-1:exon
so has part: feature:175340-175529:-1:exon
so has part: feature:174838-175025:-1:exon

XP_030820555.1
type: Protein
SIO_000068: ncbiprotein

position:180321:-1
position: 180321
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:180270-180321:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:179161-179220:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:178800-178892:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:178551-178723:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:177606-177849:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:177342-177534:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:177066-177259:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:176350-176441:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:176105-176266:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:175340-175529:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:174838-175025:-1:exon

FGR
type: Gene
subclass of: SO_0000704
RO_0002162: 87175
gene: FGR
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 181807..191269
location: region:181807-191269:1
so has part: feature:181807-191269:1:exon
subclass of: SO_0000010

115912913
type: Gene
SIO_000068: ncbigene

position:181807:1
position: 181807
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:191269:1
position: 191269
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:181807-191269:1:exon

FGR
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 87175
gene: FGR
product: FGR proto-oncogene, Src family tyrosine kinase, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 mRNAs, 39 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XM_030964709.1
SIO_010081: FGR
subclass of: SO_0000673
so part of: FGR
location: join(181807..181955,185579..186141,186234..186336,186607..186705,186862..186965,187036..187185,187618..187782,188712..188891,188977..189053,189128..189281,189839..189970,190206..191269)
location: region:181807-191269:1
so has part: feature:181807-181955:1:exon
so has part: feature:185579-186141:1:exon
so has part: feature:186234-186336:1:exon
so has part: feature:186607-186705:1:exon
so has part: feature:186862-186965:1:exon
so has part: feature:187036-187185:1:exon
so has part: feature:187618-187782:1:exon
so has part: feature:188712-188891:1:exon
so has part: feature:188977-189053:1:exon
so has part: feature:189128-189281:1:exon
so has part: feature:189839-189970:1:exon
so has part: feature:190206-191269:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:181807-181955:1:exon

position:181955:1
position: 181955
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:185579-186141:1:exon

position:185579:1
position: 185579
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:186141:1
position: 186141
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:186234-186336:1:exon

position:186234:1
position: 186234
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:186336:1
position: 186336
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:186607-186705:1:exon

position:186607:1
position: 186607
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:186705:1
position: 186705
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:186862-186965:1:exon

position:186862:1
position: 186862
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:186965:1
position: 186965
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:187036-187185:1:exon

position:187036:1
position: 187036
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:187185:1
position: 187185
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:187618-187782:1:exon

position:187618:1
position: 187618
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:187782:1
position: 187782
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:188712-188891:1:exon

position:188712:1
position: 188712
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:188891:1
position: 188891
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:188977-189053:1:exon

position:188977:1
position: 188977
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:189053:1
position: 189053
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:189128-189281:1:exon

position:189128:1
position: 189128
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:189281:1
position: 189281
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:189839-189970:1:exon

position:189839:1
position: 189839
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:189970:1
position: 189970
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:190206-191269:1:exon

position:190206:1
position: 190206
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

FGR
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 87175
gene: FGR
product: FGR proto-oncogene, Src family tyrosine kinase, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 mRNAs, 38 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XM_030964707.1
SIO_010081: FGR
subclass of: SO_0000673
so part of: FGR
location: join(181807..181955,185579..185639,185889..186141,186234..186336,186607..186705,186862..186965,187036..187185,187618..187782,188712..188891,188977..189053,189128..189281,189839..189970,190206..191269)
location: region:181807-191269:1
so has part: feature:181807-181955:1:exon
so has part: feature:185579-185639:1:exon
so has part: feature:185889-186141:1:exon
so has part: feature:186234-186336:1:exon
so has part: feature:186607-186705:1:exon
so has part: feature:186862-186965:1:exon
so has part: feature:187036-187185:1:exon
so has part: feature:187618-187782:1:exon
so has part: feature:188712-188891:1:exon
so has part: feature:188977-189053:1:exon
so has part: feature:189128-189281:1:exon
so has part: feature:189839-189970:1:exon
so has part: feature:190206-191269:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:181807-181955:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:185579-185639:1:exon

position:185639:1
position: 185639
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:185889-186141:1:exon

position:185889:1
position: 185889
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:186234-186336:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:186607-186705:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:186862-186965:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:187036-187185:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:187618-187782:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:188712-188891:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:188977-189053:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:189128-189281:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:189839-189970:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:190206-191269:1:exon

FGR
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 87175
gene: FGR
product: FGR proto-oncogene, Src family tyrosine kinase, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, 34 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_030964710.1
SIO_010081: FGR
subclass of: SO_0000673
so part of: FGR
location: join(181807..181955,185579..185639,185889..186141,186234..186336,186607..186705,186862..186965,187036..187185,188144..188299,188712..188891,188977..189053,189128..189281,189839..189970,190206..191269)
location: region:181807-191269:1
so has part: feature:181807-181955:1:exon
so has part: feature:185579-185639:1:exon
so has part: feature:185889-186141:1:exon
so has part: feature:186234-186336:1:exon
so has part: feature:186607-186705:1:exon
so has part: feature:186862-186965:1:exon
so has part: feature:187036-187185:1:exon
so has part: feature:188144-188299:1:exon
so has part: feature:188712-188891:1:exon
so has part: feature:188977-189053:1:exon
so has part: feature:189128-189281:1:exon
so has part: feature:189839-189970:1:exon
so has part: feature:190206-191269:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:181807-181955:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:185579-185639:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:185889-186141:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:186234-186336:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:186607-186705:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:186862-186965:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:187036-187185:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:188144-188299:1:exon

position:188144:1
position: 188144
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:188299:1
position: 188299
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:188712-188891:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:188977-189053:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:189128-189281:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:189839-189970:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:190206-191269:1:exon

FGR
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 87175
gene: FGR
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: tyrosine-protein kinase Fgr isoform X1
translation: MGCVPCKERGAGKGQAGGEGGSLQPPASQYDPDPTQPGAIFTRIPDFNNFQGPALPSAPSFAEPGGFASGVLQTRSGAISGGGVTLFIALYDYEARTEDDLTFQKGEKFHIINNTEGDWWEARSLSSGATGYIPSNYVAPVDSIQAEEWYFGKIGRKDAERQLLCHSNSRGTFLIRESETTKGAYSLSIRDWDEAKGDHVKHYKIRKLDSGGYYITTRAQFSTVQQLVQHYIERAAGLCCRLAVPCHKGTPKLADLSVKTKDVWEIPRESLQLLKKLGNGQFGEVWMGTWNGTTKVAVKTLKPGTMSPEAFLEEAQIMKRLRHDKLVQLYAVVSEEPIYIVTEFMSQGSLLDFLKDGDGRYLKLPQLVDMAAQIAAGMAYIERMNYIHRDLRAANILVGDNLVCKIADFGLARLIEDDEYTARQGAKFPIKWTAPEAALFGRFTIKSDVWSFGILLTELVTKGRVPYPGMNNREVLEQVERGYRMQCPGSCPPSLHELMVQCWKREPEERPTFEYLQSFLEDYFTATEPQYQPGDNQ
SIO_010081: FGR
subclass of: SO_0000673
so part of: FGR
location: join(185901..186141,186234..186336,186607..186705,186862..186965,187036..187185,187618..187782,188712..188891,188977..189053,189128..189281,189839..189970,190206..190414)
location: region:185901-190414:1
so has part: feature:185901-186141:1:exon
so has part: feature:186234-186336:1:exon
so has part: feature:186607-186705:1:exon
so has part: feature:186862-186965:1:exon
so has part: feature:187036-187185:1:exon
so has part: feature:187618-187782:1:exon
so has part: feature:188712-188891:1:exon
so has part: feature:188977-189053:1:exon
so has part: feature:189128-189281:1:exon
so has part: feature:189839-189970:1:exon
so has part: feature:190206-190414:1:exon

XP_030820567.1
type: Protein
SIO_000068: ncbiprotein

position:185901:1
position: 185901
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:190414:1
position: 190414
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:185901-186141:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:186234-186336:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:186607-186705:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:186862-186965:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:187036-187185:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:187618-187782:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:188712-188891:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:188977-189053:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:189128-189281:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:189839-189970:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:190206-190414:1:exon

FGR
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 87175
gene: FGR
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: tyrosine-protein kinase Fgr isoform X1
translation: MGCVPCKERGAGKGQAGGEGGSLQPPASQYDPDPTQPGAIFTRIPDFNNFQGPALPSAPSFAEPGGFASGVLQTRSGAISGGGVTLFIALYDYEARTEDDLTFQKGEKFHIINNTEGDWWEARSLSSGATGYIPSNYVAPVDSIQAEEWYFGKIGRKDAERQLLCHSNSRGTFLIRESETTKGAYSLSIRDWDEAKGDHVKHYKIRKLDSGGYYITTRAQFSTVQQLVQHYIERAAGLCCRLAVPCHKGTPKLADLSVKTKDVWEIPRESLQLLKKLGNGQFGEVWMGTWNGTTKVAVKTLKPGTMSPEAFLEEAQIMKRLRHDKLVQLYAVVSEEPIYIVTEFMSQGSLLDFLKDGDGRYLKLPQLVDMAAQIAAGMAYIERMNYIHRDLRAANILVGDNLVCKIADFGLARLIEDDEYTARQGAKFPIKWTAPEAALFGRFTIKSDVWSFGILLTELVTKGRVPYPGMNNREVLEQVERGYRMQCPGSCPPSLHELMVQCWKREPEERPTFEYLQSFLEDYFTATEPQYQPGDNQ
SIO_010081: FGR
subclass of: SO_0000673
so part of: FGR
location: join(185901..186141,186234..186336,186607..186705,186862..186965,187036..187185,187618..187782,188712..188891,188977..189053,189128..189281,189839..189970,190206..190414)
location: region:185901-190414:1
so has part: feature:185901-186141:1:exon
so has part: feature:186234-186336:1:exon
so has part: feature:186607-186705:1:exon
so has part: feature:186862-186965:1:exon
so has part: feature:187036-187185:1:exon
so has part: feature:187618-187782:1:exon
so has part: feature:188712-188891:1:exon
so has part: feature:188977-189053:1:exon
so has part: feature:189128-189281:1:exon
so has part: feature:189839-189970:1:exon
so has part: feature:190206-190414:1:exon

XP_030820569.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:185901-186141:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:186234-186336:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:186607-186705:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:186862-186965:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:187036-187185:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:187618-187782:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:188712-188891:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:188977-189053:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:189128-189281:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:189839-189970:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:190206-190414:1:exon

FGR
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 87175
gene: FGR
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: tyrosine-protein kinase Fgr isoform X2
translation: MGCVPCKERGAGKGQAGGEGGSLQPPASQYDPDPTQPGAIFTRIPDFNNFQGPALPSAPSFAEPGGFASGVLQTRSGAISGGGVTLFIALYDYEARTEDDLTFQKGEKFHIINNTEGDWWEARSLSSGATGYIPSNYVAPVDSIQAEEWYFGKIGRKDAERQLLCHSNSRGTFLIRESETTKGAYSLSIRDWDEAKGDHVKHYKIRKLDSGGYYITTRAQFSTVQQLVQHYIEYNDGLCHLLTHPCPAVKPQTLGLAKDAWEIARESVTLDRKLGMGCFGDVWMGTWNGTTKVAVKTLKPGTMSPEAFLEEAQIMKRLRHDKLVQLYAVVSEEPIYIVTEFMSQGSLLDFLKDGDGRYLKLPQLVDMAAQIAAGMAYIERMNYIHRDLRAANILVGDNLVCKIADFGLARLIEDDEYTARQGAKFPIKWTAPEAALFGRFTIKSDVWSFGILLTELVTKGRVPYPGMNNREVLEQVERGYRMQCPGSCPPSLHELMVQCWKREPEERPTFEYLQSFLEDYFTATEPQYQPGDNQ
SIO_010081: FGR
subclass of: SO_0000673
so part of: FGR
location: join(185901..186141,186234..186336,186607..186705,186862..186965,187036..187185,188144..188299,188712..188891,188977..189053,189128..189281,189839..189970,190206..190414)
location: region:185901-190414:1
so has part: feature:185901-186141:1:exon
so has part: feature:186234-186336:1:exon
so has part: feature:186607-186705:1:exon
so has part: feature:186862-186965:1:exon
so has part: feature:187036-187185:1:exon
so has part: feature:188144-188299:1:exon
so has part: feature:188712-188891:1:exon
so has part: feature:188977-189053:1:exon
so has part: feature:189128-189281:1:exon
so has part: feature:189839-189970:1:exon
so has part: feature:190206-190414:1:exon

XP_030820570.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:185901-186141:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:186234-186336:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:186607-186705:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:186862-186965:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:187036-187185:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:188144-188299:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:188712-188891:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:188977-189053:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:189128-189281:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:189839-189970:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:190206-190414:1:exon

AHDC1
type: Gene
subclass of: SO_0000704
RO_0002162: 87175
gene: AHDC1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 197202..248127
location: region:197202-248127:1
so has part: feature:197202-248127:1:exon
subclass of: SO_0000010

115912776
type: Gene
SIO_000068: ncbigene

position:197202:1
position: 197202
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:248127:1
position: 248127
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:197202-248127:1:exon

AHDC1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 87175
gene: AHDC1
product: AT-hook DNA binding motif containing 1
exception: unclassified transcription discrepancy
note: The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: inserted 2 bases in 2 codons; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 ESTs, 1 Protein, and 99% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XM_030964496.1
SIO_010081: AHDC1
subclass of: SO_0000673
so part of: AHDC1
location: join(197202..197394,197886..198006,239351..239513,240226..240266,240651..246423,247375..248127)
location: region:197202-248127:1
so has part: feature:197202-197394:1:exon
so has part: feature:197886-198006:1:exon
so has part: feature:239351-239513:1:exon
so has part: feature:240226-240266:1:exon
so has part: feature:240651-246423:1:exon
so has part: feature:247375-248127:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:197202-197394:1:exon

position:197394:1
position: 197394
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:197886-198006:1:exon

position:197886:1
position: 197886
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:198006:1
position: 198006
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:239351-239513:1:exon

position:239351:1
position: 239351
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:239513:1
position: 239513
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:240226-240266:1:exon

position:240226:1
position: 240226
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:240266:1
position: 240266
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:240651-246423:1:exon

position:240651:1
position: 240651
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:246423:1
position: 246423
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:247375-248127:1:exon

position:247375:1
position: 247375
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

AHDC1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 87175
gene: AHDC1
exception: unclassified translation discrepancy
note: The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: inserted 2 bases in 2 codons; Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: LOW QUALITY PROTEIN: AT-hook DNA-binding motif-containing protein 1
translation: MLAVPLTAERSGAAVPAAHGERSEGLGAPGRRLCSPPLSQPPQSRERQKVASGAEGSGTPAAGQDAAPAGGRSLPKRAGSEGRGAQEPADGSAVACQPLALENGASPPAEWFPCAQGSGPCQPGSDGDSRSFRVNLHCKHPRNRELKCNSRSSSKAEGPGVTFPDPHVSNCSAKRHAGEEEVRMRVKPPGPVVTTSVVRGSPDYVREPKFYPPGHPVQRPPACPAEKALSCSVLSFPEGSCPALGREHQPGSLLHGDPADRCQSVHGGTKAAEDLLGCAGEPRILGGSTEEASARDRAPKTFPNATLASGRCNVDGILALLRSKCGNGHINLHPVVQLIDIMKDLNRLSEDLKNSGVHLDCGSLRGGSGAHEDSRLLPADRDLQYSFFSSPSLANSIRSPEERGVLLKSDPSRHPRPPARDGEAEGGGGXAPQPPGHAVSVGDVSKAPADEAGCSQPDASDYSELAEADILNELASLACPGTQLLESQAMEPQPQLLPAQELDSQSRLLDSQSLESQPQLLDSQSLEPLPESLELQNLEPLGLQSLEPLSESLELQSLEPLSESLELQSLEPLAEPLGLQTLEPLPGALEPPLLPTEPSLLEPQPLGTVSELLEAQPGAGDPLRPHGLQPRLGGCPLSTMVKRGPCGGRGAGRCGEDHRKYALRRTDKPKMLCRRRRAGRGRRVDITPESHVLSPLTLPAELPPGPXEPDTPVLSPPPPPPPTTLDPNEMPKAPTAGKKSKCRGVRKMVVKMAKIPVSLGRRNKTTYKVSSLSSNLNLEGKELAASSSMEPTPLLKMKNNGRNVVVVFPPGEMPIILKRKRGRPPKNLLLGQAKPKEPTPEVKKRRRRKQKLASPQPSYIADTNDSKADYSDVLAKLAFLNRQSQCSGRCSPPRCWTPSEPESIHQAPDTQSISHFLHRVQGFRRRGGKAGGFGGRGGSHAARAARCSFSDFFEGIGKKKKAPTALHADPVHPRKRGRLEPDPVGKPKRKRRARKNGALFPEPNSGQSFGDGPAAEWGGGEKGSPWAAHHGHPGSQPGRNGGYQGAEARPFHAAGLESGSSGRAGFYAGSAPSSQTETGPERHSLFTGYFRSLLDSDDSSDLLDFALSASRSESRKSAAAYTAPPAALPGQRGMAAYTARGGKVPAANPGAEAFHAAMQGRPAFPPGRASSAYGVTQGSSECRGTESFPKLAPPSAVSRSPTAHPVASGTPGYSPYGSYGSAGQSVAPASVFPPGKQYPSAQDCPNSKDCSFAYGSGSSLPSSPSSAHSAGYAPPTAGPSLPLGKAAFFNSAEQGGQFSSAAHTPLRCDSRASTVSPGGYMVPKGSASFQPSPENCRQFPSSAPWAFRQGYGGLDWSSEAFSQLYNPGFECHLNEPNVILDISNYTPQKAKQQTVSETFSESSSDSTQFNQPAGYRRANSEASSSEGQSSLSSLEKLMMDWNEASSAPGYNWNQSVLFQSNSKPGRGRRKKVDMFDTSHLSFSSSSSSSSVYPSKRNTGPRQPRGSRGACASKKERGTGKAKFPTKSQAVNPLFQDSTDLGLDYYSGDSSMSPLPSQSRGFGVGERDPCDYTGPYSMNPSTPSDGTFVQGFQSDSPGLGQPDLESKHFPALPHQLAAPGQQTVFEAGLQKAFSPNCSPTLAFKEDLRAGSIRKLPACDSLKHSMQGGTLPHAPHLACRDLPMPQAHYDSPSCKNPPYWYSPNASTRSPSYDGKAGAGMLVDFMGRTDPQCLNPHLSSPSSSHPSKGEKEPLEMSRAHHRGPYACPLINDLNISPVPRDSMLQLQDNYRYPSFAPQGHPVMAPSQKSGFLGPMVEQQHPEDTFTVTSL
SIO_010081: AHDC1
subclass of: SO_0000673
so part of: AHDC1
location: join(197248..197394,197886..198006,239351..239513,240226..240266,240651..245660)
location: region:197248-245660:1
so has part: feature:197248-197394:1:exon
so has part: feature:197886-198006:1:exon
so has part: feature:239351-239513:1:exon
so has part: feature:240226-240266:1:exon
so has part: feature:240651-245660:1:exon

XP_030820356.1
type: Protein
SIO_000068: ncbiprotein

position:197248:1
position: 197248
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:245660:1
position: 245660
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:197248-197394:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:197886-198006:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:239351-239513:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:240226-240266:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:240651-245660:1:exon

WASF2
type: Gene
subclass of: SO_0000704
RO_0002162: 87175
gene: WASF2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 257745..289518
location: region:257745-289518:1
so has part: feature:257745-289518:1:exon
subclass of: SO_0000010

115912853
type: Gene
SIO_000068: ncbigene

position:257745:1
position: 257745
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:289518:1
position: 289518
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:257745-289518:1:exon

WASF2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 87175
gene: WASF2
product: WASP family member 2
exception: unclassified transcription discrepancy
note: The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: deleted 2 bases in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 10 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
transcript id: XM_030964626.1
SIO_010081: WASF2
subclass of: SO_0000673
so part of: WASF2
location: join(257745..257845,274331..274484,278257..278391,278889..279042,280096..280213,280970..281100,282450..282605,284384..284903,285323..289518)
location: region:257745-289518:1
so has part: feature:257745-257845:1:exon
so has part: feature:274331-274484:1:exon
so has part: feature:278257-278391:1:exon
so has part: feature:278889-279042:1:exon
so has part: feature:280096-280213:1:exon
so has part: feature:280970-281100:1:exon
so has part: feature:282450-282605:1:exon
so has part: feature:284384-284903:1:exon
so has part: feature:285323-289518:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:257745-257845:1:exon

position:257845:1
position: 257845
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:274331-274484:1:exon

position:274331:1
position: 274331
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:274484:1
position: 274484
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:278257-278391:1:exon

position:278257:1
position: 278257
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:278391:1
position: 278391
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:278889-279042:1:exon

position:278889:1
position: 278889
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:279042:1
position: 279042
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:280096-280213:1:exon

position:280096:1
position: 280096
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:280213:1
position: 280213
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:280970-281100:1:exon

position:280970:1
position: 280970
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:281100:1
position: 281100
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:282450-282605:1:exon

position:282450:1
position: 282450
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:282605:1
position: 282605
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:284384-284903:1:exon

position:284384:1
position: 284384
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:284903:1
position: 284903
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:285323-289518:1:exon

position:285323:1
position: 285323
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

WASF2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 87175
gene: WASF2
exception: unclassified translation discrepancy
note: The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: deleted 2 bases in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: LOW QUALITY PROTEIN: wiskott-Aldrich syndrome protein family member 2
translation: MPLVTRNIEPRHLCRQTLPSVPSELECVTNITLANVIRQLGSLSKSAEDIFGELFTQANTFASRVSILVERVDRLQVKVTQLDPKEEEVSLQGINSRKAFKSSTTQDQKLFDRDSLPVPVLETYRTCNTPPPLNILSPYRDDGKEALKFYTDPSYFFDLWKEKMLQDTKDIMKEKRKHRKEKKENPNRGNVNPRKIKTRKEEWEKLKMGQEFVESKDKHGPAGYPSNMVYQNGSIGSSESMDGSCYPPPPQTDSIVPPPPSFPDDSLPPPPLEFSYPVDNQRGSGSGGPKRSSLVSPSHPPPAPPIGSPSAARPGFAPPPAPPPPPPLMENTPPPPPPMGFPSPGTPPPPSPPSFPPHPEFAAPPPPPPPPAADYSSVLPAPGPQPGAGAAPPPPPPPPPGPPPLAPGGLDGPPPPPPPSDTSAAKPKSSLPAVSDARSDLLSAIRQGFQLRKVEEQREQEKRDVVGNDVATILSRRIAVEYSDSEDDSSEFDEDEWSD
SIO_010081: WASF2
subclass of: SO_0000673
so part of: WASF2
location: join(274355..274484,278257..278391,278889..279042,280096..280213,280970..281100,282450..282605,284384..284903,285323..285480)
location: region:274355-285480:1
so has part: feature:274355-274484:1:exon
so has part: feature:278257-278391:1:exon
so has part: feature:278889-279042:1:exon
so has part: feature:280096-280213:1:exon
so has part: feature:280970-281100:1:exon
so has part: feature:282450-282605:1:exon
so has part: feature:284384-284903:1:exon
so has part: feature:285323-285480:1:exon

XP_030820486.1
type: Protein
SIO_000068: ncbiprotein

position:274355:1
position: 274355
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:285480:1
position: 285480
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:274355-274484:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:278257-278391:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:278889-279042:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:280096-280213:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:280970-281100:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:282450-282605:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:284384-284903:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:285323-285480:1:exon

GPR3
type: Gene
subclass of: SO_0000704
RO_0002162: 87175
gene: GPR3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(294291..296708)
location: region:294291-296708:-1
so has part: feature:294291-296708:-1:exon
subclass of: SO_0000010

115912921
type: Gene
SIO_000068: ncbigene

position:294291:-1
position: 294291
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:296708:-1
position: 296708
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:294291-296708:-1:exon

GPR3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 87175
gene: GPR3
product: G protein-coupled receptor 3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, 29 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_030964725.1
SIO_010081: GPR3
subclass of: SO_0000673
so part of: GPR3
location: complement(join(294291..296157,296602..296708))
location: region:294291-296708:-1
so has part: feature:296602-296708:-1:exon
so has part: feature:294291-296157:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:296602-296708:-1:exon

position:296602:-1
position: 296602
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:294291-296157:-1:exon

position:296157:-1
position: 296157
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

GPR3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 87175
gene: GPR3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: G-protein coupled receptor 3
translation: MMEKGPPNSSEGQQGWFSARNGSSSSLDLESVVQPLALNPWDVVLCISGTIISCENAIVVVVIFYTPAFRTPMFLLIGSLATADLLAGVGLILHFAFVYFIPSEAASLLTVGLLVSSFTASVCSLLAITIDRYLSLYNALTYYSERTVTRTYFMLILTWGAAICHGLLPVLGWNCLEEPSACSVVRPLTKSHLVLLSASLLAVLAVMLQLYVQICRIVCRHAHQIAVQRHFLASSHYGTAARKGIATPAVILGTLASCWLPFAIYGLLGDCSSPALYTYATLLPAAYSSLLNPVIYAFRNREIQKVLWAVCCGCVSPSLPFRSRSPSDV
SIO_010081: GPR3
subclass of: SO_0000673
so part of: GPR3
location: complement(294997..295986)
location: region:294997-295986:-1
so has part: feature:294997-295986:-1:exon

XP_030820585.1
type: Protein
SIO_000068: ncbiprotein

position:294997:-1
position: 294997
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:295986:-1
position: 295986
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:294997-295986:-1:exon

CD164L2
type: Gene
subclass of: SO_0000704
RO_0002162: 87175
gene: CD164L2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 297993..302872
location: region:297993-302872:1
so has part: feature:297993-302872:1:exon
subclass of: SO_0000010

115912922
type: Gene
SIO_000068: ncbigene

position:297993:1
position: 297993
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:302872:1
position: 302872
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:297993-302872:1:exon

CD164L2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 87175
gene: CD164L2
product: CD164 molecule like 2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_030964726.1
SIO_010081: CD164L2
subclass of: SO_0000673
so part of: CD164L2
location: join(297993..298173,299619..299720,300036..300113,300291..300356,300975..301140,302484..302872)
location: region:297993-302872:1
so has part: feature:297993-298173:1:exon
so has part: feature:299619-299720:1:exon
so has part: feature:300036-300113:1:exon
so has part: feature:300291-300356:1:exon
so has part: feature:300975-301140:1:exon
so has part: feature:302484-302872:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:297993-298173:1:exon

position:298173:1
position: 298173
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:299619-299720:1:exon

position:299619:1
position: 299619
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:299720:1
position: 299720
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:300036-300113:1:exon

position:300036:1
position: 300036
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:300113:1
position: 300113
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:300291-300356:1:exon

position:300291:1
position: 300291
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:300356:1
position: 300356
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:300975-301140:1:exon

position:300975:1
position: 300975
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:301140:1
position: 301140
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:302484-302872:1:exon

position:302484:1
position: 302484
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

CD164L2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 87175
gene: CD164L2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: CD164 sialomucin-like 2 protein
translation: MAPPGPAALRCALLCALLCAHGPAPTRAGECGQLSSCELCTAVHSHNGTGCVWVGCGTPEEPGAGSCVRRGSAAQGTCALYNSSALCRALKSHTEEPPRSHSKEPVTHSTRTTTTSAPLTGSPEFHAPGSDTASFIGGMVLVLCLQAVAFFLFKFIKSKDSTYQTLI
SIO_010081: CD164L2
subclass of: SO_0000673
so part of: CD164L2
location: join(298089..298173,299619..299720,300036..300113,300291..300356,300975..301140,302484..302490)
location: region:298089-302490:1
so has part: feature:298089-298173:1:exon
so has part: feature:299619-299720:1:exon
so has part: feature:300036-300113:1:exon
so has part: feature:300291-300356:1:exon
so has part: feature:300975-301140:1:exon
so has part: feature:302484-302490:1:exon

XP_030820586.1
type: Protein
SIO_000068: ncbiprotein

position:298089:1
position: 298089
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:302490:1
position: 302490
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:298089-298173:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:299619-299720:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:300036-300113:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:300291-300356:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:300975-301140:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:302484-302490:1:exon

SYTL1
type: Gene
subclass of: SO_0000704
RO_0002162: 87175
gene: SYTL1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(302521..308910)
location: region:302521-308910:-1
so has part: feature:302521-308910:-1:exon
subclass of: SO_0000010

115912923
type: Gene
SIO_000068: ncbigene

position:302521:-1
position: 302521
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:308910:-1
position: 308910
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:302521-308910:-1:exon

SYTL1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 87175
gene: SYTL1
product: synaptotagmin like 1
exception: unclassified transcription discrepancy
note: The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: inserted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 16 Proteins, and 94% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_030964727.1
SIO_010081: SYTL1
subclass of: SO_0000673
so part of: SYTL1
location: complement(join(302521..303539,303660..303865,303940..304039,304147..304225,304293..304454,304550..304652,304731..304904,305071..305183,305447..305544,305663..305761,305986..306025,306319..306418,306494..306639,306968..307232,308058..308170,308730..308910))
location: region:302521-308910:-1
so has part: feature:308730-308910:-1:exon
so has part: feature:308058-308170:-1:exon
so has part: feature:306968-307232:-1:exon
so has part: feature:306494-306639:-1:exon
so has part: feature:306319-306418:-1:exon
so has part: feature:305986-306025:-1:exon
so has part: feature:305663-305761:-1:exon
so has part: feature:305447-305544:-1:exon
so has part: feature:305071-305183:-1:exon
so has part: feature:304731-304904:-1:exon
so has part: feature:304550-304652:-1:exon
so has part: feature:304293-304454:-1:exon
so has part: feature:304147-304225:-1:exon
so has part: feature:303940-304039:-1:exon
so has part: feature:303660-303865:-1:exon
so has part: feature:302521-303539:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:308730-308910:-1:exon

position:308730:-1
position: 308730
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:308058-308170:-1:exon

position:308058:-1
position: 308058
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:308170:-1
position: 308170
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:306968-307232:-1:exon

position:306968:-1
position: 306968
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:307232:-1
position: 307232
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:306494-306639:-1:exon

position:306494:-1
position: 306494
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:306639:-1
position: 306639
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:306319-306418:-1:exon

position:306319:-1
position: 306319
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:306418:-1
position: 306418
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:305986-306025:-1:exon

position:305986:-1
position: 305986
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:306025:-1
position: 306025
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:305663-305761:-1:exon

position:305663:-1
position: 305663
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:305761:-1
position: 305761
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:305447-305544:-1:exon

position:305447:-1
position: 305447
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:305544:-1
position: 305544
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:305071-305183:-1:exon

position:305071:-1
position: 305071
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:305183:-1
position: 305183
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:304731-304904:-1:exon

position:304731:-1
position: 304731
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:304904:-1
position: 304904
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:304550-304652:-1:exon

position:304550:-1
position: 304550
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:304652:-1
position: 304652
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:304293-304454:-1:exon

position:304293:-1
position: 304293
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:304454:-1
position: 304454
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:304147-304225:-1:exon

position:304147:-1
position: 304147
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:304225:-1
position: 304225
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:303940-304039:-1:exon

position:303940:-1
position: 303940
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:304039:-1
position: 304039
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:303660-303865:-1:exon

position:303660:-1
position: 303660
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:303865:-1
position: 303865
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:302521-303539:-1:exon

position:303539:-1
position: 303539
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

SYTL1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 87175
gene: SYTL1
exception: unclassified translation discrepancy
note: The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: inserted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: LOW QUALITY PROTEIN: synaptotagmin-like protein 1
translation: MLASLVHARRAEPPESPRCPRAVPALSPPPRMALQPEPPLDLSFLTEEERSCIARVLQRDWQLRRREEGRISKLRKSVSDPARLRSLTGDWFSDARAQRHQHPLGSDLVRASIRRRRRPRGPGELERGLSLEAIDEPLAEEREDEDGALETDESSPAEEVQEATEPQPSPPGPAAEGTPGSQPALQGDXPPREQESPAQPGDPGGPSLGSSSTEEDEEEEEPDSAQSSHSAGQRPETPQTDQTPPDSLSPQNGHTPPRLLSTSSSVSSLSCPQLSGSLMSLYSEGELGRVPVRGCVQFSLHYQAAEKELQVHVLRCRQLAEAKKQRSDPYIKTYLLPDKSNRSKRKTAVRKRSLDPVFNETLKYKLEKRELQGRTLNLSVWHHDSLGRNLFLGEVEVALGTWDWANTRPEWFSLQPRMPIPSDGLASRGSLNLALKFIPAGSEGAGMPPTGELHIWVKDAQSLIPLQSGTVDAFVQCYVLPDDSKASRQKTRVVKRSLNPLFNHTMVYDGFQARDLAEACAEFTLWHHEAFSKRQLGGIRLSLGTGSSYGLPVGWMDSTAEEQGVWKQLLQQPGRWVEALLPLRTNLVPRG
SIO_010081: SYTL1
subclass of: SO_0000673
so part of: SYTL1
location: complement(join(303400..303539,303660..303865,303940..304039,304147..304225,304293..304454,304550..304652,304731..304904,305071..305183,305447..305544,305663..305761,305986..306025,306319..306418,306494..306639,306968..307182))
location: region:303400-307182:-1
so has part: feature:306968-307182:-1:exon
so has part: feature:306494-306639:-1:exon
so has part: feature:306319-306418:-1:exon
so has part: feature:305986-306025:-1:exon
so has part: feature:305663-305761:-1:exon
so has part: feature:305447-305544:-1:exon
so has part: feature:305071-305183:-1:exon
so has part: feature:304731-304904:-1:exon
so has part: feature:304550-304652:-1:exon
so has part: feature:304293-304454:-1:exon
so has part: feature:304147-304225:-1:exon
so has part: feature:303940-304039:-1:exon
so has part: feature:303660-303865:-1:exon
so has part: feature:303400-303539:-1:exon

XP_030820587.1
type: Protein
SIO_000068: ncbiprotein

position:303400:-1
position: 303400
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:307182:-1
position: 307182
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:306968-307182:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:306494-306639:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:306319-306418:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:305986-306025:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:305663-305761:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:305447-305544:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:305071-305183:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:304731-304904:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:304550-304652:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:304293-304454:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:304147-304225:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:303940-304039:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:303660-303865:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:303400-303539:-1:exon

TMEM222
type: Gene
subclass of: SO_0000704
RO_0002162: 87175
gene: TMEM222
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(314149..319940)
location: region:314149-319940:-1
so has part: feature:314149-319940:-1:exon
subclass of: SO_0000010

115912837
type: Gene
SIO_000068: ncbigene

position:314149:-1
position: 314149
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:319940:-1
position: 319940
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:314149-319940:-1:exon

TMEM222
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 87175
gene: TMEM222
product: transmembrane protein 222
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 ESTs, 7 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XM_030964596.1
SIO_010081: TMEM222
subclass of: SO_0000673
so part of: TMEM222
location: complement(join(314149..315222,316085..316215,316503..316599,317575..317606,318260..318344,319814..319940))
location: region:314149-319940:-1
so has part: feature:319814-319940:-1:exon
so has part: feature:318260-318344:-1:exon
so has part: feature:317575-317606:-1:exon
so has part: feature:316503-316599:-1:exon
so has part: feature:316085-316215:-1:exon
so has part: feature:314149-315222:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:319814-319940:-1:exon

position:319814:-1
position: 319814
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:318260-318344:-1:exon

position:318260:-1
position: 318260
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:318344:-1
position: 318344
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:317575-317606:-1:exon

position:317575:-1
position: 317575
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:317606:-1
position: 317606
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:316503-316599:-1:exon

position:316503:-1
position: 316503
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:316599:-1
position: 316599
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:316085-316215:-1:exon

position:316085:-1
position: 316085
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:316215:-1
position: 316215
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:314149-315222:-1:exon

position:315222:-1
position: 315222
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

TMEM222
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 87175
gene: TMEM222
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: transmembrane protein 222
translation: MAAAEPGMKQFNGGGGAAPDAERGRFPHCVVWTPIPVLTWLFPIIGHMGICTSAGVIRDFAGPYFVSEDNMAFGKPVKYWKLDPSKVYATGPNAWDTAVHDASEEYKHRMHNLCCDNCHSHVALALNLMRYDNSTSWNMVKLCFFTLLYGRYVSIGGFVKTWLPFVLFLGVIVTVVLTLHLR
SIO_010081: TMEM222
subclass of: SO_0000673
so part of: TMEM222
location: complement(join(315135..315222,316085..316215,316503..316599,317575..317606,318260..318344,319814..319929))
location: region:315135-319929:-1
so has part: feature:319814-319929:-1:exon
so has part: feature:318260-318344:-1:exon
so has part: feature:317575-317606:-1:exon
so has part: feature:316503-316599:-1:exon
so has part: feature:316085-316215:-1:exon
so has part: feature:315135-315222:-1:exon

XP_030820456.1
type: Protein
SIO_000068: ncbiprotein

position:315135:-1
position: 315135
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:319929:-1
position: 319929
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:319814-319929:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:318260-318344:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:317575-317606:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:316503-316599:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:316085-316215:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:315135-315222:-1:exon

WDTC1
type: Gene
subclass of: SO_0000704
RO_0002162: 87175
gene: WDTC1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(324639..348621)
location: region:324639-348621:-1
so has part: feature:324639-348621:-1:exon
subclass of: SO_0000010

115912879
type: Gene
SIO_000068: ncbigene

position:324639:-1
position: 324639
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:348621:-1
position: 348621
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:324639-348621:-1:exon

WDTC1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 87175
gene: WDTC1
product: WD and tetratricopeptide repeats 1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 mRNAs, 22 ESTs, 8 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
transcript id: XM_030964664.1
SIO_010081: WDTC1
subclass of: SO_0000673
so part of: WDTC1
location: complement(join(324639..327536,327645..327837,328220..328388,328762..328997,332265..332438,333751..333847,334428..334503,335579..335694,336771..336865,337110..337292,337683..337870,338286..338397,339518..339564,340630..340713,343054..343191,348465..348621))
location: region:324639-348621:-1
so has part: feature:348465-348621:-1:exon
so has part: feature:343054-343191:-1:exon
so has part: feature:340630-340713:-1:exon
so has part: feature:339518-339564:-1:exon
so has part: feature:338286-338397:-1:exon
so has part: feature:337683-337870:-1:exon
so has part: feature:337110-337292:-1:exon
so has part: feature:336771-336865:-1:exon
so has part: feature:335579-335694:-1:exon
so has part: feature:334428-334503:-1:exon
so has part: feature:333751-333847:-1:exon
so has part: feature:332265-332438:-1:exon
so has part: feature:328762-328997:-1:exon
so has part: feature:328220-328388:-1:exon
so has part: feature:327645-327837:-1:exon
so has part: feature:324639-327536:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:348465-348621:-1:exon

position:348465:-1
position: 348465
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:343054-343191:-1:exon

position:343054:-1
position: 343054
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:343191:-1
position: 343191
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:340630-340713:-1:exon

position:340630:-1
position: 340630
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:340713:-1
position: 340713
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:339518-339564:-1:exon

position:339518:-1
position: 339518
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:339564:-1
position: 339564
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:338286-338397:-1:exon

position:338286:-1
position: 338286
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:338397:-1
position: 338397
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:337683-337870:-1:exon

position:337683:-1
position: 337683
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:337870:-1
position: 337870
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:337110-337292:-1:exon

position:337110:-1
position: 337110
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:337292:-1
position: 337292
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:336771-336865:-1:exon

position:336771:-1
position: 336771
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:336865:-1
position: 336865
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:335579-335694:-1:exon

position:335579:-1
position: 335579
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:335694:-1
position: 335694
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:334428-334503:-1:exon

position:334428:-1
position: 334428
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:334503:-1
position: 334503
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:333751-333847:-1:exon

position:333751:-1
position: 333751
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:333847:-1
position: 333847
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:332265-332438:-1:exon

position:332265:-1
position: 332265
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:332438:-1
position: 332438
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:328762-328997:-1:exon

position:328762:-1
position: 328762
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:328997:-1
position: 328997
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:328220-328388:-1:exon

position:328220:-1
position: 328220
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:328388:-1
position: 328388
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:327645-327837:-1:exon

position:327645:-1
position: 327645
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:327837:-1
position: 327837
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:324639-327536:-1:exon

position:327536:-1
position: 327536
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

WDTC1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 87175
gene: WDTC1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: WD and tetratricopeptide repeats protein 1
translation: MLGCTAALPTASLRLPHCKKMAKANITRDIIHRQIKERGALGFERHYHVTDPFIRRLGLEAELQGHSGCVNCLEWNEKGDLLASGSDDQHTIVWDPLHHKKLLSMHTGHTANIFSVKFLPHSGDRILITGAADSKVHVHDLTVKETVHMFGDHTNRVKRIATAPMWPNTFWSAAEDGLIRQYDLRENSKRSEVLIDLTEYCGQLVEAKCLTVNPQDNNYLAVGASGPFVRLYDIRMIHNHRKSMKQSPSAGVHTFCDRQKPLPDGAAQYYVAGHLPVKLPDYNNRLRVLVATYVTFSPDGTELLVNMGGEQVYLFDLTYKQRPYTFLLPKKCHTSGEVQNGKTSTNGVSNGIHLHSNGFRLAEGRAHVSPQVELPPYLERIKQQANEAFACQLWTQAIQLYSKAVQKAPNNAMLYGNRAAAYMKRKWDGDHYDALRDCLKAISLNPCHLKAHFRLARCLFELKYVAEALECLDDFKGKFPEQAHSSACDALDRDINAALFSKSDNAEDKKGGGPIRLRATGRKDSISEDEMVLRERSYDYKFRYCGHCNTTTDIKEANFFGSNAQYIVSGSDDGSFFIWEKETTNLVRVLQGDESIVNCLQPHPSYCFLATSGIDPVVRLWNPRPESETLNGRVVVDMEGASQANQRRMNADPLEVMLLNMGYRITGLTSAGAAGSDDEDSSEGQVQCRPS
SIO_010081: WDTC1
subclass of: SO_0000673
so part of: WDTC1
location: complement(join(327339..327536,327645..327837,328220..328388,328762..328997,332265..332438,333751..333847,334428..334503,335579..335694,336771..336865,337110..337292,337683..337870,338286..338397,339518..339564,340630..340713,343054..343161))
location: region:327339-343161:-1
so has part: feature:343054-343161:-1:exon
so has part: feature:340630-340713:-1:exon
so has part: feature:339518-339564:-1:exon
so has part: feature:338286-338397:-1:exon
so has part: feature:337683-337870:-1:exon
so has part: feature:337110-337292:-1:exon
so has part: feature:336771-336865:-1:exon
so has part: feature:335579-335694:-1:exon
so has part: feature:334428-334503:-1:exon
so has part: feature:333751-333847:-1:exon
so has part: feature:332265-332438:-1:exon
so has part: feature:328762-328997:-1:exon
so has part: feature:328220-328388:-1:exon
so has part: feature:327645-327837:-1:exon
so has part: feature:327339-327536:-1:exon

XP_030820524.1
type: Protein
SIO_000068: ncbiprotein

position:327339:-1
position: 327339
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:343161:-1
position: 343161
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:343054-343161:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:340630-340713:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:339518-339564:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:338286-338397:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:337683-337870:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:337110-337292:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:336771-336865:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:335579-335694:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:334428-334503:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:333751-333847:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:332265-332438:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:328762-328997:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:328220-328388:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:327645-327837:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:327339-327536:-1:exon

SLC9A1
type: Gene
subclass of: SO_0000704
RO_0002162: 87175
gene: SLC9A1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 353492..378762
location: region:353492-378762:1
so has part: feature:353492-378762:1:exon
subclass of: SO_0000010

115912915
type: Gene
SIO_000068: ncbigene

position:353492:1
position: 353492
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:378762:1
position: 378762
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:353492-378762:1:exon

SLC9A1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 87175
gene: SLC9A1
product: solute carrier family 9 member A1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 1 EST, 30 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
transcript id: XM_030964712.1
SIO_010081: SLC9A1
subclass of: SO_0000673
so part of: SLC9A1
location: join(353492..353834,370350..370810,372285..372535,372999..373216,373654..373856,374075..374164,374503..374573,375049..375222,375350..375464,375882..375983,376412..376484,377128..378762)
location: region:353492-378762:1
so has part: feature:353492-353834:1:exon
so has part: feature:370350-370810:1:exon
so has part: feature:372285-372535:1:exon
so has part: feature:372999-373216:1:exon
so has part: feature:373654-373856:1:exon
so has part: feature:374075-374164:1:exon
so has part: feature:374503-374573:1:exon
so has part: feature:375049-375222:1:exon
so has part: feature:375350-375464:1:exon
so has part: feature:375882-375983:1:exon
so has part: feature:376412-376484:1:exon
so has part: feature:377128-378762:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:353492-353834:1:exon

position:353834:1
position: 353834
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:370350-370810:1:exon

position:370350:1
position: 370350
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:370810:1
position: 370810
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:372285-372535:1:exon

position:372285:1
position: 372285
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:372535:1
position: 372535
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:372999-373216:1:exon

position:372999:1
position: 372999
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:373216:1
position: 373216
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:373654-373856:1:exon

position:373654:1
position: 373654
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:373856:1
position: 373856
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:374075-374164:1:exon

position:374075:1
position: 374075
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:374164:1
position: 374164
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:374503-374573:1:exon

position:374503:1
position: 374503
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:374573:1
position: 374573
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:375049-375222:1:exon

position:375049:1
position: 375049
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:375222:1
position: 375222
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:375350-375464:1:exon

position:375350:1
position: 375350
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:375464:1
position: 375464
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:375882-375983:1:exon

position:375882:1
position: 375882
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:375983:1
position: 375983
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:376412-376484:1:exon

position:376412:1
position: 376412
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:376484:1
position: 376484
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:377128-378762:1:exon

position:377128:1
position: 377128
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

SLC9A1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 87175
gene: SLC9A1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: sodium/hydrogen exchanger 1
translation: MGAAALRALPWALLLLGPLLPGQVLQANPMLTSEGQPAPLPGGAVPGFTPAPPAAPEEIHPLKEQPANGSAEGHAKHRKAFPVIGIDYTHVRIPFEISLWILLACLMKLGFHVIPSVSSIVPESCLLIVVGLLVGGLIKGVGEKPPILKSDIFFLFLLPPIILDAGYFLPLRPFTENLGTILIFAVVGTLWNAFFLGGLMYAVCQLGGPGLNHIGLLANLLFGSIISAVDPVAVLAVFEEIHINELLHILVFGESLLNDAVTVVLYHLFEEFASFEQVTILDIILGFLSFFVVSLGGVLVGVIYGVIAAFTSRFTSHIRVIEPLFVFLYSYMAYLSAELFHLSGIMALIAAGVVMRPYVEANISHKSHTTIKYFLKMWSSVSETLIFIFLGVSTVAGHHYWNWTFVISTLFFCLIARVLGVLVLTWFINKFRIVKLTPKDQFIIAYGGLRGAIAFSLGYLLDYKHSGMRDMFLTAIITVIFFTVFVQGMTIRPLVDLLAVKKKQETKRSINEEIHTQFLDHLLTGIEDICGHYGHHHWKDKLNRFNKKYVKKCLIAGERSKEPQLIAFYHKMEMKQAIELVESGGIGKIPSAVSTVSIQNINPQTLPLERVLPALSKDKEEEIRKILRTNLQKTRQRLRSYNRHTLVADPYEEAWNQMLLRRQKARQLEQKMNNYLTVPAHKVDSPTMSRARIGSDPLAYEPKEDSENLPIITIDPASPQSPESVDLMSEEPKGCSGLPPSPEEDEEGLVMRVKEPSSPGTDDVFTPGNGDSPSNQRMLRCLSDPGPRPEPEEGEPFIPKGQ
SIO_010081: SLC9A1
subclass of: SO_0000673
so part of: SLC9A1
location: join(353507..353834,370350..370810,372285..372535,372999..373216,373654..373856,374075..374164,374503..374573,375049..375222,375350..375464,375882..375983,376412..376484,377128..377450)
location: region:353507-377450:1
so has part: feature:353507-353834:1:exon
so has part: feature:370350-370810:1:exon
so has part: feature:372285-372535:1:exon
so has part: feature:372999-373216:1:exon
so has part: feature:373654-373856:1:exon
so has part: feature:374075-374164:1:exon
so has part: feature:374503-374573:1:exon
so has part: feature:375049-375222:1:exon
so has part: feature:375350-375464:1:exon
so has part: feature:375882-375983:1:exon
so has part: feature:376412-376484:1:exon
so has part: feature:377128-377450:1:exon

XP_030820572.1
type: Protein
SIO_000068: ncbiprotein

position:353507:1
position: 353507
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:377450:1
position: 377450
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:353507-353834:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:370350-370810:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:372285-372535:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:372999-373216:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:373654-373856:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:374075-374164:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:374503-374573:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:375049-375222:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:375350-375464:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:375882-375983:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:376412-376484:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:377128-377450:1:exon

TENT5B
type: Gene
subclass of: SO_0000704
RO_0002162: 87175
gene: TENT5B
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 384731..389953
location: region:384731-389953:1
so has part: feature:384731-389953:1:exon
subclass of: SO_0000010

115912858
type: Gene
SIO_000068: ncbigene

position:384731:1
position: 384731
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:389953:1
position: 389953
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:384731-389953:1:exon

TENT5B
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 87175
gene: TENT5B
product: terminal nucleotidyltransferase 5B
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 27 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
transcript id: XM_030964637.1
SIO_010081: TENT5B
subclass of: SO_0000673
so part of: TENT5B
location: join(384731..385155,388923..389953)
location: region:384731-389953:1
so has part: feature:384731-385155:1:exon
so has part: feature:388923-389953:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:384731-385155:1:exon

position:385155:1
position: 385155
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:388923-389953:1:exon

position:388923:1
position: 388923
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

TENT5B
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 87175
gene: TENT5B
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: terminal nucleotidyltransferase 5B
translation: MLEAAAAGPAPGGAEQRGSRFSVLTWEQVQRLDQILGEAVPIHGRGNFPTLSVRPRTIVQVVRSRLEKKGIPVHNVRLNGSAASHVLHQDSGLGYKDLDLIFGVDLKTEDVFQLVKDVVMDCLLDFLPEGVNKDKITPMTLKEAYVQKLVKVCNETDRWSLISLSNNSGKNVELKFVDSLRRQFEFSVDSFQIILDSLLLFGECSENPMAENFHPTVTGESMYGDFEEAMEHLRHRVIATRNPEEIRGGGLLKYCNLLVRGFKPKSEVDMKALQRYMCSRFFIDFSDIGEQLRKLECYLQSHFVGMESNRYDYLMTLHRVVNESTVCLMGHERRQTLNLIAMLAVRVLAEQNIIPTVTNVTCFYQPAPYVSEINFNYYVTHVQPFLPCNQSYPTWLPCN
SIO_010081: TENT5B
subclass of: SO_0000673
so part of: TENT5B
location: join(384976..385155,388923..389942)
location: region:384976-389942:1
so has part: feature:384976-385155:1:exon
so has part: feature:388923-389942:1:exon

XP_030820497.1
type: Protein
SIO_000068: ncbiprotein

position:384976:1
position: 384976
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:389942:1
position: 389942
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:384976-385155:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:388923-389942:1:exon

KDF1
type: Gene
subclass of: SO_0000704
RO_0002162: 87175
gene: KDF1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 412971..421022
location: region:412971-421022:1
so has part: feature:412971-421022:1:exon
subclass of: SO_0000010

115912844
type: Gene
SIO_000068: ncbigene

position:412971:1
position: 412971
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:421022:1
position: 421022
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:412971-421022:1:exon

KDF1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 87175
gene: KDF1
product: keratinocyte differentiation factor 1, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 9 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_030964607.1
SIO_010081: KDF1
subclass of: SO_0000673
so part of: KDF1
location: join(412971..413015,414049..414220,416185..417307,418132..418206,418800..421022)
location: region:412971-421022:1
so has part: feature:412971-413015:1:exon
so has part: feature:414049-414220:1:exon
so has part: feature:416185-417307:1:exon
so has part: feature:418132-418206:1:exon
so has part: feature:418800-421022:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:412971-413015:1:exon

position:413015:1
position: 413015
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:414049-414220:1:exon

position:414049:1
position: 414049
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:414220:1
position: 414220
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:416185-417307:1:exon

position:416185:1
position: 416185
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:417307:1
position: 417307
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:418132-418206:1:exon

position:418132:1
position: 418132
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:418206:1
position: 418206
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:418800-421022:1:exon

position:418800:1
position: 418800
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

KDF1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 87175
gene: KDF1
product: keratinocyte differentiation factor 1, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 9 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_030964609.1
SIO_010081: KDF1
subclass of: SO_0000673
so part of: KDF1
location: join(415876..415912,416185..417307,418132..418206,418800..421022)
location: region:415876-421022:1
so has part: feature:415876-415912:1:exon
so has part: feature:416185-417307:1:exon
so has part: feature:418132-418206:1:exon
so has part: feature:418800-421022:1:exon

position:415876:1
position: 415876
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:415876-415912:1:exon

position:415912:1
position: 415912
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:416185-417307:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:418132-418206:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:418800-421022:1:exon

KDF1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 87175
gene: KDF1
product: keratinocyte differentiation factor 1, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 9 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_030964608.1
SIO_010081: KDF1
subclass of: SO_0000673
so part of: KDF1
location: join(415977..416045,416185..417307,418132..418206,418800..421022)
location: region:415977-421022:1
so has part: feature:415977-416045:1:exon
so has part: feature:416185-417307:1:exon
so has part: feature:418132-418206:1:exon
so has part: feature:418800-421022:1:exon

position:415977:1
position: 415977
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:415977-416045:1:exon

position:416045:1
position: 416045
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:416185-417307:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:418132-418206:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:418800-421022:1:exon

KDF1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 87175
gene: KDF1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: keratinocyte differentiation factor 1
translation: MLGRRSRLPPELSSARQREQPCPEAVPLRARAARDSRDSRDTDVSLEVLSGSEIKASRGRAQQMRDRKGRKAELKDPNGREAETITFISGTAEAPPNQSFCCSSLSQAWNTYKAVFCCIVTCGGCFQDCSVCIPYPGPAETSTDDGKNGDYNGRLPNSPTNTSPAEKNGNQIKKSSMGSSFSYPDVKLKGIPVYPNRNTNHHVESDSCCKELLEKPFRNSIEKPALPSSHRSSEEYYSFHESDVDISELNGSMSSRQIDVLIFKKLTELFSVHQIDELAKCTSDTVFLEKTNKISDLINSITQDYNLDEQDAECRLVRGIIRISTRKSRVRPHICSPASQGHQDPSGRGTAPDSGNETMLESMVISQDELAVQISEETPADVLARNMRRHSSAGSPTSRDSSFQDTETDSSGAPLLQVYC
SIO_010081: KDF1
subclass of: SO_0000673
so part of: KDF1
location: join(416203..417307,418132..418206,418800..418882)
location: region:416203-418882:1
so has part: feature:416203-417307:1:exon
so has part: feature:418132-418206:1:exon
so has part: feature:418800-418882:1:exon

XP_030820467.1
type: Protein
SIO_000068: ncbiprotein

position:416203:1
position: 416203
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:418882:1
position: 418882
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:416203-417307:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:418132-418206:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:418800-418882:1:exon

KDF1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 87175
gene: KDF1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: keratinocyte differentiation factor 1
translation: MLGRRSRLPPELSSARQREQPCPEAVPLRARAARDSRDSRDTDVSLEVLSGSEIKASRGRAQQMRDRKGRKAELKDPNGREAETITFISGTAEAPPNQSFCCSSLSQAWNTYKAVFCCIVTCGGCFQDCSVCIPYPGPAETSTDDGKNGDYNGRLPNSPTNTSPAEKNGNQIKKSSMGSSFSYPDVKLKGIPVYPNRNTNHHVESDSCCKELLEKPFRNSIEKPALPSSHRSSEEYYSFHESDVDISELNGSMSSRQIDVLIFKKLTELFSVHQIDELAKCTSDTVFLEKTNKISDLINSITQDYNLDEQDAECRLVRGIIRISTRKSRVRPHICSPASQGHQDPSGRGTAPDSGNETMLESMVISQDELAVQISEETPADVLARNMRRHSSAGSPTSRDSSFQDTETDSSGAPLLQVYC
SIO_010081: KDF1
subclass of: SO_0000673
so part of: KDF1
location: join(416203..417307,418132..418206,418800..418882)
location: region:416203-418882:1
so has part: feature:416203-417307:1:exon
so has part: feature:418132-418206:1:exon
so has part: feature:418800-418882:1:exon

XP_030820468.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:416203-417307:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:418132-418206:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:418800-418882:1:exon

KDF1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 87175
gene: KDF1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: keratinocyte differentiation factor 1
translation: MLGRRSRLPPELSSARQREQPCPEAVPLRARAARDSRDSRDTDVSLEVLSGSEIKASRGRAQQMRDRKGRKAELKDPNGREAETITFISGTAEAPPNQSFCCSSLSQAWNTYKAVFCCIVTCGGCFQDCSVCIPYPGPAETSTDDGKNGDYNGRLPNSPTNTSPAEKNGNQIKKSSMGSSFSYPDVKLKGIPVYPNRNTNHHVESDSCCKELLEKPFRNSIEKPALPSSHRSSEEYYSFHESDVDISELNGSMSSRQIDVLIFKKLTELFSVHQIDELAKCTSDTVFLEKTNKISDLINSITQDYNLDEQDAECRLVRGIIRISTRKSRVRPHICSPASQGHQDPSGRGTAPDSGNETMLESMVISQDELAVQISEETPADVLARNMRRHSSAGSPTSRDSSFQDTETDSSGAPLLQVYC
SIO_010081: KDF1
subclass of: SO_0000673
so part of: KDF1
location: join(416203..417307,418132..418206,418800..418882)
location: region:416203-418882:1
so has part: feature:416203-417307:1:exon
so has part: feature:418132-418206:1:exon
so has part: feature:418800-418882:1:exon

XP_030820469.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:416203-417307:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:418132-418206:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:418800-418882:1:exon

NUDC
type: Gene
subclass of: SO_0000704
RO_0002162: 87175
gene: NUDC
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(423204..431920)
location: region:423204-431920:-1
so has part: feature:423204-431920:-1:exon
subclass of: SO_0000010

115912807
type: Gene
SIO_000068: ncbigene

position:423204:-1
position: 423204
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:431920:-1
position: 431920
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:423204-431920:-1:exon

NUDC
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 87175
gene: NUDC
product: nuclear distribution C, dynein complex regulator
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 23 ESTs, 8 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
transcript id: XM_030964547.1
SIO_010081: NUDC
subclass of: SO_0000673
so part of: NUDC
location: complement(join(423204..424065,425708..425826,425917..426000,426576..426770,427170..427283,427668..427751,428019..428237,430684..430761,431785..431920))
location: region:423204-431920:-1
so has part: feature:431785-431920:-1:exon
so has part: feature:430684-430761:-1:exon
so has part: feature:428019-428237:-1:exon
so has part: feature:427668-427751:-1:exon
so has part: feature:427170-427283:-1:exon
so has part: feature:426576-426770:-1:exon
so has part: feature:425917-426000:-1:exon
so has part: feature:425708-425826:-1:exon
so has part: feature:423204-424065:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:431785-431920:-1:exon

position:431785:-1
position: 431785
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:430684-430761:-1:exon

position:430684:-1
position: 430684
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:430761:-1
position: 430761
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:428019-428237:-1:exon

position:428019:-1
position: 428019
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:428237:-1
position: 428237
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:427668-427751:-1:exon

position:427668:-1
position: 427668
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:427751:-1
position: 427751
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:427170-427283:-1:exon

position:427170:-1
position: 427170
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:427283:-1
position: 427283
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:426576-426770:-1:exon

position:426576:-1
position: 426576
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:426770:-1
position: 426770
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:425917-426000:-1:exon

position:425917:-1
position: 425917
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:426000:-1
position: 426000
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:425708-425826:-1:exon

position:425708:-1
position: 425708
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:425826:-1
position: 425826
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:423204-424065:-1:exon

position:424065:-1
position: 424065
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

NUDC
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 87175
gene: NUDC
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: nuclear migration protein nudC
translation: MGLSAEEAAEQEDRFDGMLLAMAQQHQGGVRELVNTFFSFLRRKTDFFTGGEDGVAEKLITEAFSHHNKLAQKERREKKARQEAERREKAERAARLARDRERDREGPQPGEPRIKELTDEEAERLQLEINQKKEAQGQGNSVPVKPSEEEGESSDSNKQGTDDEEEDEKDKGKLKPNSGNGADLPNYRWTQTLSELDLAVPFKVSFRLKGKDVVVDIQRRRLKVGLKGHPPVIDGELFNEVKVEESSWLIEDGKTVTVHLEKINKMEWWNKLVSTDPEINTKKINPENSKLSDLDSETRSMVEKMMYDQRQKSMGLPTSDEQKKQDILKKFMEQHPEMDFSKAKFN
SIO_010081: NUDC
subclass of: SO_0000673
so part of: NUDC
location: complement(join(424014..424065,425708..425826,425917..426000,426576..426770,427170..427283,427668..427751,428019..428237,430684..430761,431785..431880))
location: region:424014-431880:-1
so has part: feature:431785-431880:-1:exon
so has part: feature:430684-430761:-1:exon
so has part: feature:428019-428237:-1:exon
so has part: feature:427668-427751:-1:exon
so has part: feature:427170-427283:-1:exon
so has part: feature:426576-426770:-1:exon
so has part: feature:425917-426000:-1:exon
so has part: feature:425708-425826:-1:exon
so has part: feature:424014-424065:-1:exon

XP_030820407.1
type: Protein
SIO_000068: ncbiprotein

position:424014:-1
position: 424014
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:431880:-1
position: 431880
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:431785-431880:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:430684-430761:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:428019-428237:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:427668-427751:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:427170-427283:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:426576-426770:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:425917-426000:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:425708-425826:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:424014-424065:-1:exon

NR0B2
type: Gene
subclass of: SO_0000704
RO_0002162: 87175
gene: NR0B2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 433154..434477
location: region:433154-434477:1
so has part: feature:433154-434477:1:exon
subclass of: SO_0000010

115912698
type: Gene
SIO_000068: ncbigene

position:433154:1
position: 433154
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:434477:1
position: 434477
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:433154-434477:1:exon

NR0B2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 87175
gene: NR0B2
product: nuclear receptor subfamily 0 group B member 2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins
transcript id: XM_030964359.1
SIO_010081: NR0B2
subclass of: SO_0000673
so part of: NR0B2
location: join(433154..433670,434206..434477)
location: region:433154-434477:1
so has part: feature:433154-433670:1:exon
so has part: feature:434206-434477:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:433154-433670:1:exon

position:433670:1
position: 433670
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:434206-434477:1:exon

position:434206:1
position: 434206
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

NR0B2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 87175
gene: NR0B2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: nuclear receptor subfamily 0 group B member 2
translation: MSSSMDAGCERCRCHGKERQPAILYTLLSQELRPRQQCPCGQRRAVCLRTPQLTCHAASHVLLKTISFVKNVAAFCLLPREDQLLLLDSCWVPLFLLGLVQEMVTFEVMEAPAPSMLKKILLSGQSKGQEPEGTQPTLAAVQRLQGCLNSFWRLDLSPSEFTYLRGAILFNPDIPGLRAALYIESLQREAQRALRELPHPEHRERFPHILRLAASLGSVPAALVTALFFRPVIGDAAMGELLAEMLFEVSGWPRAPWLPLPR
SIO_010081: NR0B2
subclass of: SO_0000673
so part of: NR0B2
location: join(433154..433670,434206..434477)
location: region:433154-434477:1
so has part: feature:433154-433670:1:exon
so has part: feature:434206-434477:1:exon

XP_030820219.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:433154-433670:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:434206-434477:1:exon

GPATCH3
type: Gene
subclass of: SO_0000704
RO_0002162: 87175
gene: GPATCH3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 436106..440636
location: region:436106-440636:1
so has part: feature:436106-440636:1:exon
subclass of: SO_0000010

115912877
type: Gene
SIO_000068: ncbigene

position:436106:1
position: 436106
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:440636:1
position: 440636
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:436106-440636:1:exon

GPATCH3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 87175
gene: GPATCH3
product: G-patch domain containing 3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 ESTs, 2 Proteins, and 95% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_030964661.1
SIO_010081: GPATCH3
subclass of: SO_0000673
so part of: GPATCH3
location: join(436106..436494,436704..437139,438636..438810,439237..439296,439547..439668,439825..439952,440302..440636)
location: region:436106-440636:1
so has part: feature:436106-436494:1:exon
so has part: feature:436704-437139:1:exon
so has part: feature:438636-438810:1:exon
so has part: feature:439237-439296:1:exon
so has part: feature:439547-439668:1:exon
so has part: feature:439825-439952:1:exon
so has part: feature:440302-440636:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:436106-436494:1:exon

position:436494:1
position: 436494
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:436704-437139:1:exon

position:436704:1
position: 436704
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:437139:1
position: 437139
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:438636-438810:1:exon

position:438636:1
position: 438636
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:438810:1
position: 438810
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:439237-439296:1:exon

position:439237:1
position: 439237
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:439296:1
position: 439296
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:439547-439668:1:exon

position:439547:1
position: 439547
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:439668:1
position: 439668
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:439825-439952:1:exon

position:439825:1
position: 439825
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:439952:1
position: 439952
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:440302-440636:1:exon

position:440302:1
position: 440302
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

GPATCH3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 87175
gene: GPATCH3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: G patch domain-containing protein 3
translation: MAAPSGTGGDGGAARYCLVSGIPAALRSAQLRAYFSQFLEAGGFLCFHYRHRPERPPAGGGGGASAPRTCCCLVSVRPGRARRFVRMYSGKRWLGPGGAALPGRCLIRRVRLSAGTGTGTAPSGTGCLPCPLLVPAGPEAPPSPAGAAAGPAVTEAELRRLPELNPPSFMPRGNVGTPLGVFLELIRACRLPPRVISRLQLDFPRTGSSRRYGNVPFQYPGTDTVPEQERVYTAAGDEITEGEEPVALTQPAQPQEDEEGQQQEEEESNSDDDDDTCEEWQRHAALHEDVTQQERLRERLFEEEIELKWEKGGSGLVFYTDAQFWQEQDGDFDEQTADDWDVDMSIYYDKDGGDKDARDSVQMWLEQRLRAGLEEGSVSGQHIGTFERHTKGFGRKVLEQQGWTEGLGLGSSNSGMAEALDNEGQNPRCKRGLGYHGEKLPTFVRRKKPRGDSSVVISTIYDEPEPQDMGDQLLRRQPLTAMKYRQDMAFVRASQPALGSLRAQPR
SIO_010081: GPATCH3
subclass of: SO_0000673
so part of: GPATCH3
location: join(436115..436494,436704..437139,438636..438810,439237..439296,439547..439668,439825..439952,440302..440521)
location: region:436115-440521:1
so has part: feature:436115-436494:1:exon
so has part: feature:436704-437139:1:exon
so has part: feature:438636-438810:1:exon
so has part: feature:439237-439296:1:exon
so has part: feature:439547-439668:1:exon
so has part: feature:439825-439952:1:exon
so has part: feature:440302-440521:1:exon

XP_030820521.1
type: Protein
SIO_000068: ncbiprotein

position:436115:1
position: 436115
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:440521:1
position: 440521
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:436115-436494:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:436704-437139:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:438636-438810:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:439237-439296:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:439547-439668:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:439825-439952:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:440302-440521:1:exon

GPN2
type: Gene
subclass of: SO_0000704
RO_0002162: 87175
gene: GPN2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 441494..445830
location: region:441494-445830:1
so has part: feature:441494-445830:1:exon
subclass of: SO_0000010

115912835
type: Gene
SIO_000068: ncbigene

position:441494:1
position: 441494
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:445830:1
position: 445830
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:441494-445830:1:exon

GPN2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 87175
gene: GPN2
product: GPN-loop GTPase 2, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 2 ESTs, 19 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XM_030964591.1
SIO_010081: GPN2
subclass of: SO_0000673
so part of: GPN2
location: join(441494..441547,441917..442361,443559..443715,443977..444137,444698..444828,445271..445830)
location: region:441494-445830:1
so has part: feature:441494-441547:1:exon
so has part: feature:441917-442361:1:exon
so has part: feature:443559-443715:1:exon
so has part: feature:443977-444137:1:exon
so has part: feature:444698-444828:1:exon
so has part: feature:445271-445830:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:441494-441547:1:exon

position:441547:1
position: 441547
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:441917-442361:1:exon

position:441917:1
position: 441917
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:442361:1
position: 442361
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:443559-443715:1:exon

position:443559:1
position: 443559
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:443715:1
position: 443715
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:443977-444137:1:exon

position:443977:1
position: 443977
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:444137:1
position: 444137
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:444698-444828:1:exon

position:444698:1
position: 444698
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:444828:1
position: 444828
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:445271-445830:1:exon

position:445271:1
position: 445271
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

GPN2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 87175
gene: GPN2
product: GPN-loop GTPase 2, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 2 ESTs, 19 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_030964592.1
SIO_010081: GPN2
subclass of: SO_0000673
so part of: GPN2
location: join(441499..441547,441863..442361,443559..443715,443977..444137,444698..444828,445271..445830)
location: region:441499-445830:1
so has part: feature:441499-441547:1:exon
so has part: feature:441863-442361:1:exon
so has part: feature:443559-443715:1:exon
so has part: feature:443977-444137:1:exon
so has part: feature:444698-444828:1:exon
so has part: feature:445271-445830:1:exon

position:441499:1
position: 441499
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:441499-441547:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:441863-442361:1:exon

position:441863:1
position: 441863
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:443559-443715:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:443977-444137:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:444698-444828:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:445271-445830:1:exon

GPN2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 87175
gene: GPN2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: GPN-loop GTPase 2
translation: MAEGSRPSPLAFGQVVIGPPGSGKSTYCQAMREFLARLGRRVAVVNLDPANEAVPGPCALDIGELVTLPDVMASLGLGPNGGLLYCMEYLEANSDWLRERLQDLRGHYLLFDCPGQVELYTHHQALKNVFAQLAKWNFRLAAVHLVDSHYCTDPGKFISVLCTSLSTMLHVELPHVNVLSKMDLIEHYGKLAFNLDYYTEVLDLSYLVDHLASDPFFRNFRRLNEKLVEVIEDYSLVSFVPLNVQDKQSMRQVMQAVDKANGYSFGEREQRSLEALMSAAVGADFHFSSTLAVQEKYVQSQDKAVEEEVMDL
SIO_010081: GPN2
subclass of: SO_0000673
so part of: GPN2
location: join(441945..442361,443559..443715,443977..444137,444698..444828,445271..445343)
location: region:441945-445343:1
so has part: feature:441945-442361:1:exon
so has part: feature:443559-443715:1:exon
so has part: feature:443977-444137:1:exon
so has part: feature:444698-444828:1:exon
so has part: feature:445271-445343:1:exon

XP_030820451.1
type: Protein
SIO_000068: ncbiprotein

position:441945:1
position: 441945
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:445343:1
position: 445343
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:441945-442361:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:443559-443715:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:443977-444137:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:444698-444828:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:445271-445343:1:exon

GPN2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 87175
gene: GPN2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: GPN-loop GTPase 2
translation: MAEGSRPSPLAFGQVVIGPPGSGKSTYCQAMREFLARLGRRVAVVNLDPANEAVPGPCALDIGELVTLPDVMASLGLGPNGGLLYCMEYLEANSDWLRERLQDLRGHYLLFDCPGQVELYTHHQALKNVFAQLAKWNFRLAAVHLVDSHYCTDPGKFISVLCTSLSTMLHVELPHVNVLSKMDLIEHYGKLAFNLDYYTEVLDLSYLVDHLASDPFFRNFRRLNEKLVEVIEDYSLVSFVPLNVQDKQSMRQVMQAVDKANGYSFGEREQRSLEALMSAAVGADFHFSSTLAVQEKYVQSQDKAVEEEVMDL
SIO_010081: GPN2
subclass of: SO_0000673
so part of: GPN2
location: join(441945..442361,443559..443715,443977..444137,444698..444828,445271..445343)
location: region:441945-445343:1
so has part: feature:441945-442361:1:exon
so has part: feature:443559-443715:1:exon
so has part: feature:443977-444137:1:exon
so has part: feature:444698-444828:1:exon
so has part: feature:445271-445343:1:exon

XP_030820452.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:441945-442361:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:443559-443715:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:443977-444137:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:444698-444828:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:445271-445343:1:exon

SFN
type: Gene
subclass of: SO_0000704
RO_0002162: 87175
gene: SFN
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(449737..451436)
location: region:449737-451436:-1
so has part: feature:449737-451436:-1:exon
subclass of: SO_0000010

115912826
type: Gene
SIO_000068: ncbigene

position:449737:-1
position: 449737
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:451436:-1
position: 451436
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:449737-451436:-1:exon

SFN
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 87175
gene: SFN
product: stratifin
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 mRNAs, 1 EST, 49 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_030964581.1
SIO_010081: SFN
subclass of: SO_0000673
so part of: SFN
location: complement(449737..451436)
location: region:449737-451436:-1
so has part: feature:449737-451436:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:449737-451436:-1:exon

SFN
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 87175
gene: SFN
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: 14-3-3 protein sigma
translation: MARNQQVQKAKLAEQAERYEDMADFMKAVVEHGDELSNEERNLLSVAYKNVVGCQRSAWRVISSIEHKTEEGDDKAQVVNEYREKVEQELNAVCNNVLGLLDKYLIKKDSDTESKVFYLKMKGDYFRYLAEVASGDDRLSTIEKAQEAYQEAMDISKKEMQPTNPIRLGLALNFSVFHYEIANAPEQAISLAKTTFDEAMGDLHTLSEDSYKDSTLIMQLLRDNLTLWTAECAGEDGGEAGEEPKN
SIO_010081: SFN
subclass of: SO_0000673
so part of: SFN
location: complement(450190..450930)
location: region:450190-450930:-1
so has part: feature:450190-450930:-1:exon

XP_030820441.1
type: Protein
SIO_000068: ncbiprotein

position:450190:-1
position: 450190
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:450930:-1
position: 450930
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:450190-450930:-1:exon

ZDHHC18
type: Gene
subclass of: SO_0000704
RO_0002162: 87175
gene: ZDHHC18
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(453805..464641)
location: region:453805-464641:-1
so has part: feature:453805-464641:-1:exon
subclass of: SO_0000010

115912909
type: Gene
SIO_000068: ncbigene

position:453805:-1
position: 453805
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:464641:-1
position: 464641
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:453805-464641:-1:exon

ZDHHC18
type: Miscellaneous RNA
subclass of: SO_0000673
RO_0002162: 87175
gene: ZDHHC18
product: zinc finger DHHC-type containing 18, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XR_004061354.1
SIO_010081: ZDHHC18
so part of: ZDHHC18
location: complement(join(453805..454395,455194..455285,456980..457079,457723..457832,459013..459115,459438..459486,459890..460027,460741..460890,462288..462373,464394..464534))
location: region:453805-464534:-1
so has part: feature:464394-464534:-1:exon
so has part: feature:462288-462373:-1:exon
so has part: feature:460741-460890:-1:exon
so has part: feature:459890-460027:-1:exon
so has part: feature:459438-459486:-1:exon
so has part: feature:459013-459115:-1:exon
so has part: feature:457723-457832:-1:exon
so has part: feature:456980-457079:-1:exon
so has part: feature:455194-455285:-1:exon
so has part: feature:453805-454395:-1:exon

position:464534:-1
position: 464534
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:464394-464534:-1:exon

position:464394:-1
position: 464394
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:462288-462373:-1:exon

position:462288:-1
position: 462288
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:462373:-1
position: 462373
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:460741-460890:-1:exon

position:460741:-1
position: 460741
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:460890:-1
position: 460890
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:459890-460027:-1:exon

position:459890:-1
position: 459890
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:460027:-1
position: 460027
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:459438-459486:-1:exon

position:459438:-1
position: 459438
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:459486:-1
position: 459486
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:459013-459115:-1:exon

position:459013:-1
position: 459013
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:459115:-1
position: 459115
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:457723-457832:-1:exon

position:457723:-1
position: 457723
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:457832:-1
position: 457832
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:456980-457079:-1:exon

position:456980:-1
position: 456980
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:457079:-1
position: 457079
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:455194-455285:-1:exon

position:455194:-1
position: 455194
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:455285:-1
position: 455285
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:453805-454395:-1:exon

position:454395:-1
position: 454395
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

ZDHHC18
type: Miscellaneous RNA
subclass of: SO_0000673
RO_0002162: 87175
gene: ZDHHC18
product: zinc finger DHHC-type containing 18, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 2 ESTs, 5 Proteins, and 94% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XR_004061353.1
SIO_010081: ZDHHC18
so part of: ZDHHC18
location: complement(join(453806..454395,455194..455285,456980..457079,457723..457832,459013..459115,459438..459486,459890..460027,460741..460890,462288..462448,464394..464641))
location: region:453806-464641:-1
so has part: feature:464394-464641:-1:exon
so has part: feature:462288-462448:-1:exon
so has part: feature:460741-460890:-1:exon
so has part: feature:459890-460027:-1:exon
so has part: feature:459438-459486:-1:exon
so has part: feature:459013-459115:-1:exon
so has part: feature:457723-457832:-1:exon
so has part: feature:456980-457079:-1:exon
so has part: feature:455194-455285:-1:exon
so has part: feature:453806-454395:-1:exon

position:453806:-1
position: 453806
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:464394-464641:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:462288-462448:-1:exon

position:462448:-1
position: 462448
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:460741-460890:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:459890-460027:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:459438-459486:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:459013-459115:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:457723-457832:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:456980-457079:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:455194-455285:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:453806-454395:-1:exon

ZDHHC18
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 87175
gene: ZDHHC18
product: zinc finger DHHC-type containing 18, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 2 ESTs, 5 Proteins, and 91% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XM_030964702.1
SIO_010081: ZDHHC18
subclass of: SO_0000673
so part of: ZDHHC18
location: complement(join(455089..455285,456980..457079,457723..457832,459013..459115,459438..459486,459890..460027,460741..460890,462288..462448,464394..464641))
location: region:455089-464641:-1
so has part: feature:464394-464641:-1:exon
so has part: feature:462288-462448:-1:exon
so has part: feature:460741-460890:-1:exon
so has part: feature:459890-460027:-1:exon
so has part: feature:459438-459486:-1:exon
so has part: feature:459013-459115:-1:exon
so has part: feature:457723-457832:-1:exon
so has part: feature:456980-457079:-1:exon
so has part: feature:455089-455285:-1:exon

position:455089:-1
position: 455089
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:464394-464641:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:462288-462448:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:460741-460890:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:459890-460027:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:459438-459486:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:459013-459115:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:457723-457832:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:456980-457079:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:455089-455285:-1:exon

ZDHHC18
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 87175
gene: ZDHHC18
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: palmitoyltransferase ZDHHC18 isoform X1
translation: MKDCEYRQISPGAAATPGPGPGGPAAAAPRAGAARRPRRKWEVFPGRNRFYCGGRLMLARHSGVFALTLGLILATSGLFFAFDCPFLASHLTLAIPIIAAVLFFFVISCLLQTSFRDPGILPRATPSEAADLERRIDSMGSSTYRPPARTMEVVINKYVVKLKYCYTCKMFRPPRTSHCSVCDNCVERFDHHCPWVGNCVGKRNYRYFYAFILSLSFLTAFIFACVVTHLTLRSQRDGFLATLKTTPASVLELVICFFSVWSILGLSGFHTYLVASNLTTNEDIKGSWSNKRGSEFANPYSHKSILTNCCAVLCGPFYPSLIDRRGFIQPDIGTPSSPKSEIPSLGAKTDTSMEDACQDFAISCTA
SIO_010081: ZDHHC18
subclass of: SO_0000673
so part of: ZDHHC18
location: complement(join(455244..455285,456980..457079,457723..457832,459013..459115,459438..459486,459890..460027,460741..460890,462288..462448,464394..464641))
location: region:455244-464641:-1
so has part: feature:464394-464641:-1:exon
so has part: feature:462288-462448:-1:exon
so has part: feature:460741-460890:-1:exon
so has part: feature:459890-460027:-1:exon
so has part: feature:459438-459486:-1:exon
so has part: feature:459013-459115:-1:exon
so has part: feature:457723-457832:-1:exon
so has part: feature:456980-457079:-1:exon
so has part: feature:455244-455285:-1:exon

XP_030820562.1
type: Protein
SIO_000068: ncbiprotein

position:455244:-1
position: 455244
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:464394-464641:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:462288-462448:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:460741-460890:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:459890-460027:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:459438-459486:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:459013-459115:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:457723-457832:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:456980-457079:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:455244-455285:-1:exon

ZDHHC18
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 87175
gene: ZDHHC18
product: zinc finger DHHC-type containing 18, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 mRNAs, 2 ESTs, 10 Proteins, and 95% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XM_030964703.1
SIO_010081: ZDHHC18
subclass of: SO_0000673
so part of: ZDHHC18
location: complement(join(455626..457079,457723..457832,459013..459115,459438..459486,459890..460027,460741..460890,462288..462448,464394..464641))
location: region:455626-464641:-1
so has part: feature:464394-464641:-1:exon
so has part: feature:462288-462448:-1:exon
so has part: feature:460741-460890:-1:exon
so has part: feature:459890-460027:-1:exon
so has part: feature:459438-459486:-1:exon
so has part: feature:459013-459115:-1:exon
so has part: feature:457723-457832:-1:exon
so has part: feature:455626-457079:-1:exon

position:455626:-1
position: 455626
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:464394-464641:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:462288-462448:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:460741-460890:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:459890-460027:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:459438-459486:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:459013-459115:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:457723-457832:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:455626-457079:-1:exon

ZDHHC18
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 87175
gene: ZDHHC18
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: palmitoyltransferase ZDHHC18 isoform X2
translation: MKDCEYRQISPGAAATPGPGPGGPAAAAPRAGAARRPRRKWEVFPGRNRFYCGGRLMLARHSGVFALTLGLILATSGLFFAFDCPFLASHLTLAIPIIAAVLFFFVISCLLQTSFRDPGILPRATPSEAADLERRIDSMGSSTYRPPARTMEVVINKYVVKLKYCYTCKMFRPPRTSHCSVCDNCVERFDHHCPWVGNCVGKRNYRYFYAFILSLSFLTAFIFACVVTHLTLRSQRDGFLATLKTTPASVLELVICFFSVWSILGLSGFHTYLVASNLTTNEDIKGSWSNKRGSEFANPYSHKSILTNCCAVLCGPFYPSLIDRRGFIQPDIGTPSSPKSEIPSLGAKTDTSMVGGIP
SIO_010081: ZDHHC18
subclass of: SO_0000673
so part of: ZDHHC18
location: complement(join(456962..457079,457723..457832,459013..459115,459438..459486,459890..460027,460741..460890,462288..462448,464394..464641))
location: region:456962-464641:-1
so has part: feature:464394-464641:-1:exon
so has part: feature:462288-462448:-1:exon
so has part: feature:460741-460890:-1:exon
so has part: feature:459890-460027:-1:exon
so has part: feature:459438-459486:-1:exon
so has part: feature:459013-459115:-1:exon
so has part: feature:457723-457832:-1:exon
so has part: feature:456962-457079:-1:exon

XP_030820563.1
type: Protein
SIO_000068: ncbiprotein

position:456962:-1
position: 456962
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:464394-464641:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:462288-462448:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:460741-460890:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:459890-460027:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:459438-459486:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:459013-459115:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:457723-457832:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:456962-457079:-1:exon

PIGV
type: Gene
subclass of: SO_0000704
RO_0002162: 87175
gene: PIGV
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(464890..470408)
location: region:464890-470408:-1
so has part: feature:464890-470408:-1:exon
subclass of: SO_0000010

115912908
type: Gene
SIO_000068: ncbigene

position:464890:-1
position: 464890
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:470408:-1
position: 470408
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:464890-470408:-1:exon

PIGV
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 87175
gene: PIGV
product: phosphatidylinositol glycan anchor biosynthesis class V
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 9 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XM_030964701.1
SIO_010081: PIGV
subclass of: SO_0000673
so part of: PIGV
location: complement(join(464890..465666,465750..466901,467558..467711,469191..469301,470252..470408))
location: region:464890-470408:-1
so has part: feature:470252-470408:-1:exon
so has part: feature:469191-469301:-1:exon
so has part: feature:467558-467711:-1:exon
so has part: feature:465750-466901:-1:exon
so has part: feature:464890-465666:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:470252-470408:-1:exon

position:470252:-1
position: 470252
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:469191-469301:-1:exon

position:469191:-1
position: 469191
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:469301:-1
position: 469301
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:467558-467711:-1:exon

position:467558:-1
position: 467558
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:467711:-1
position: 467711
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:465750-466901:-1:exon

position:465750:-1
position: 465750
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:466901:-1
position: 466901
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:464890-465666:-1:exon

position:465666:-1
position: 465666
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

PIGV
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 87175
gene: PIGV
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: GPI mannosyltransferase 2
translation: MELWSRADPQLREVVWFALRCRALALLLQAVFNVLIPDHAADAFSPPRSGPRGLWDALLERLLGGLGRWDAEHFLFIAERGYLLEHNCAFLPLFPLGLRLLAALLPCPVPLQPRSRLLLAAALLNALLAVLAAAALLALGRAVLRRPGQAFLAALLFSLSPAGVFMAAAYSESAFAALAFGAMWQLEKGRGWLSGLLFALAAGARANGMVNAGFVLYSWGRCFVLQLQGTAVSPRELPVLWKQALSLVASAALVCAGIFLPFALFQYYAYVRFCEPGTGLAQSVPEALLQLARDKGYRVAGVGEDKPPWCSQRVPLVYSYIQDTYWNVGFLRYFELRQIPNFLLALPVTLLCSWAAWTYVSTNPRHCLTLGLVRSKSEERGKARDGFCGPAAFVYVVHSTALLAFGFFCMHVQVLTRFLGSSSPILYWFSAHLLLEHEPLLWTSGTDNPASGKPPLGKSHSSCGKGTSDNPVVRLLLNWRSITPLSKSILAFFLGYWLLGLVLHCNFLPWT
SIO_010081: PIGV
subclass of: SO_0000673
so part of: PIGV
location: complement(join(465370..465666,465750..466901,467558..467644))
location: region:465370-467644:-1
so has part: feature:467558-467644:-1:exon
so has part: feature:465750-466901:-1:exon
so has part: feature:465370-465666:-1:exon

XP_030820561.1
type: Protein
SIO_000068: ncbiprotein

position:465370:-1
position: 465370
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:467644:-1
position: 467644
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:467558-467644:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:465750-466901:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:465370-465666:-1:exon

ARID1A
type: Gene
subclass of: SO_0000704
RO_0002162: 87175
gene: ARID1A
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(472306..525630)
location: region:472306-525630:-1
so has part: feature:472306-525630:-1:exon
subclass of: SO_0000010

115912767
type: Gene
SIO_000068: ncbigene

position:472306:-1
position: 472306
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:525630:-1
position: 525630
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:472306-525630:-1:exon

ARID1A
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 87175
gene: ARID1A
product: AT-rich interaction domain 1A
exception: unclassified transcription discrepancy
note: The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: deleted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 46 ESTs, 2 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
transcript id: XM_030964462.1
SIO_010081: ARID1A
subclass of: SO_0000673
so part of: ARID1A
location: complement(join(472306..475262,475499..475629,475915..476780,478503..478599,478679..478810,479060..479210,479357..479529,479835..479967,483386..483593,484034..484243,485108..485217,485298..485443,486772..487087,487792..487959,488583..488672,488948..489188,501865..501978,503198..503644,504307..504519,524536..525630))
location: region:472306-525630:-1
so has part: feature:524536-525630:-1:exon
so has part: feature:504307-504519:-1:exon
so has part: feature:503198-503644:-1:exon
so has part: feature:501865-501978:-1:exon
so has part: feature:488948-489188:-1:exon
so has part: feature:488583-488672:-1:exon
so has part: feature:487792-487959:-1:exon
so has part: feature:486772-487087:-1:exon
so has part: feature:485298-485443:-1:exon
so has part: feature:485108-485217:-1:exon
so has part: feature:484034-484243:-1:exon
so has part: feature:483386-483593:-1:exon
so has part: feature:479835-479967:-1:exon
so has part: feature:479357-479529:-1:exon
so has part: feature:479060-479210:-1:exon
so has part: feature:478679-478810:-1:exon
so has part: feature:478503-478599:-1:exon
so has part: feature:475915-476780:-1:exon
so has part: feature:475499-475629:-1:exon
so has part: feature:472306-475262:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:524536-525630:-1:exon

position:524536:-1
position: 524536
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:504307-504519:-1:exon

position:504307:-1
position: 504307
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:504519:-1
position: 504519
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:503198-503644:-1:exon

position:503198:-1
position: 503198
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:503644:-1
position: 503644
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:501865-501978:-1:exon

position:501865:-1
position: 501865
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:501978:-1
position: 501978
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:488948-489188:-1:exon

position:488948:-1
position: 488948
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:489188:-1
position: 489188
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:488583-488672:-1:exon

position:488583:-1
position: 488583
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:488672:-1
position: 488672
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:487792-487959:-1:exon

position:487792:-1
position: 487792
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:487959:-1
position: 487959
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:486772-487087:-1:exon

position:486772:-1
position: 486772
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:487087:-1
position: 487087
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:485298-485443:-1:exon

position:485298:-1
position: 485298
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:485443:-1
position: 485443
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:485108-485217:-1:exon

position:485108:-1
position: 485108
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:485217:-1
position: 485217
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:484034-484243:-1:exon

position:484034:-1
position: 484034
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:484243:-1
position: 484243
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:483386-483593:-1:exon

position:483386:-1
position: 483386
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:483593:-1
position: 483593
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:479835-479967:-1:exon

position:479835:-1
position: 479835
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:479967:-1
position: 479967
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:479357-479529:-1:exon

position:479357:-1
position: 479357
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:479529:-1
position: 479529
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:479060-479210:-1:exon

position:479060:-1
position: 479060
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:479210:-1
position: 479210
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:478679-478810:-1:exon

position:478679:-1
position: 478679
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:478810:-1
position: 478810
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:478503-478599:-1:exon

position:478503:-1
position: 478503
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:478599:-1
position: 478599
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:475915-476780:-1:exon

position:475915:-1
position: 475915
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:476780:-1
position: 476780
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:475499-475629:-1:exon

position:475499:-1
position: 475499
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:475629:-1
position: 475629
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:472306-475262:-1:exon

position:475262:-1
position: 475262
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

ARID1A
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 87175
gene: ARID1A
exception: unclassified translation discrepancy
note: The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: deleted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: LOW QUALITY PROTEIN: AT-rich interactive domain-containing protein 1A
translation: MAAQVAPAAASSLGAPAPSELKKAEAQQRDCPPEEAGGEAAAAERGEKQAESEGPSGKELQDGAESNGGGAGAESDLKSSNGNPGPRPAAAAATLNNNLPEPPGGGGGGGSDGVGAPQPPPQQQPPPSHPAALPPPAYGFGQPYGRGAAAAFHQHGGQQSPGMAALQSGGLEQNYPGPAGAPAGPPPPQNSHGAGAEHGFPNHQYNSYYAAGRSAGSYPPPPQAYALSSPRGSAPPAAKSPAAAAAAAAFQQQQQRFGVMGPSAAGGAGGGGTTPQPTATPTLNQLLTSPSSARAYQGYPGGDYSAGPQDGAAAAKGAADMVSQYGGGSGQGWPAAGGAPPRSHHAPMSPGSSGGGGQSLGRSQQPASPMDQMGKMRPQPYGGNNPYSQQAGPQAGPQQGHGYPGQPYGPQGPQRYPMAMQSRTQSAMGSISYAQQMPPYGQQGPSAYGQQSQSPYYNQQSPHPQQQQQQQAPYSQQQQQQPAHSQPSYQQQQQQQQAQPPAPAQPAYPQPPAQPPHQQPPSPYPQQAAPQHPQGQPPYSQQQSQSPYQQQQAQQPAAQPSSSYPPAQPPQQPSAYGQQRFPPPQELSQDSFGSQASSAPSMASSKGQEEMNLNLQSRPSSLPDLSGSIDDLPMGTEGALSPGVSTSGISSSQGEQSNPAQSPFSPHTSPHLPGIRGPSPSPVGSPASVAQSRSGPLSPAAVPGNQMPPRPPSGQSDTILHPSMNQSSIAQDRGYMQRNPQMPQYSSPQPGSALSPRQSSGAQMHAGMGPYQQNSMGSYGPQGGQYGPQGGYPRQPNYNAMSNANYPSPGMGGSMNPMGAGSQMHGQSGVPPYSGLPPGRMGHGAMGSRPYGPNMANMPPQVGSGMCPPPAGMNRKAQEAAAAAMHAAANSIQNRPPGYPNMNQGGMMGTGPPYGQGINSMAGMMNPQGPPYPMGGNMANNSAGMAASPEMMGLGDVKLTPATKMNNKADGTPKAESKSKKSSSSTTTNEKITKLYELGGEPERKLWVDRYLAFTEEKAMGMTNLPAVGRKPLDLYRLYISVKEIGGLTQVNKNKKWRELATNLNVGTSSSAASSLKKQYIQCLYAFECKIERGEDPPPDIFAAADSKKSQTKIQPPSPAGSGSMQGPQTPQSTSSSMAEGGDLKPPTPASTPHSQMPPLPGIRSNSVGLQDAFADGSDPTFQKRNSMTPNPGYQPSMNTSDMMGRMSYEPNKDPYSSMRKAPGSDPFMSSGQGPNSGMGDPYNRAAGPGMGNMAMGQRQHYSYGAPYDRVRTEPGLGPEGSLGSGTPQPSILPAAPDSGMYSPSRYPQQQQQQQRHDSYGNQFSAQGTSSGSPFPSQQTTMYQQQQQNYKRPMDGSYGLPAKRHEGELYNVPYSSGQGQPQQQLPPAQPQQPSQQPPAQPSPQQDLYNQYGSTYPAERRAGQSQFPFQFGRDRVSAAPGSGAQQNIPPQMMGGPIQPAPEGPQQGALWQGRNELGYGSYPNRQSSGAAPQGPAYHGVARTDEILHSDQRVNHEGPWPSHGNRQPPYGASAPVPPMTRPPQSNYQTPPSMQNHIPQVSSPAPLPRPLENRTSPSKSPFLHSGMKMQKAGPPVPASHITPAAVQPPMIRRDITFPPGSVEATQPVLKQRRRLTAKDIGTPEAWRVMMSLKSGLLAESTWALDTINILLYDDNSIMTFNLSQLPGLLELLVEYFRRCLIEIFGILKEYEVGDPGQRTLLDPERFCKSSASSPEEGEEDDEPRSLNCEEEKEDEEEEEAAFSSKDKVPLESSEEKLVSKFDKLPVKVVQKNDPFVVDYSDKLGRVQEFDSGLLHWRIGGGDTTEHIQTHFESKTELPLPHKRASCSSALRKRSAAESNPSPREGEAPAPDGSSEKRITATMDDMLSARPGSLAGEEEEVKASETAKESSKFPFVISPAQSHRNIKILEDEPHSKDETPLCTLLDWQDSLAKRCICVSNIIRSLSFVPGNDFEMSKHPGLLLILGKLILLHHKHPERKQAPLTY…
SIO_010081: ARID1A
subclass of: SO_0000673
so part of: ARID1A
location: complement(join(473538..475262,475499..475629,475915..476780,478503..478599,478679..478810,479060..479210,479357..479529,479835..479967,483386..483593,484034..484243,485108..485217,485298..485443,486772..487087,487792..487959,488583..488672,488948..489188,501865..501978,503198..503644,504307..504519,524536..525630))
location: region:473538-525630:-1
so has part: feature:524536-525630:-1:exon
so has part: feature:504307-504519:-1:exon
so has part: feature:503198-503644:-1:exon
so has part: feature:501865-501978:-1:exon
so has part: feature:488948-489188:-1:exon
so has part: feature:488583-488672:-1:exon
so has part: feature:487792-487959:-1:exon
so has part: feature:486772-487087:-1:exon
so has part: feature:485298-485443:-1:exon
so has part: feature:485108-485217:-1:exon
so has part: feature:484034-484243:-1:exon
so has part: feature:483386-483593:-1:exon
so has part: feature:479835-479967:-1:exon
so has part: feature:479357-479529:-1:exon
so has part: feature:479060-479210:-1:exon
so has part: feature:478679-478810:-1:exon
so has part: feature:478503-478599:-1:exon
so has part: feature:475915-476780:-1:exon
so has part: feature:475499-475629:-1:exon
so has part: feature:473538-475262:-1:exon

XP_030820322.1
type: Protein
SIO_000068: ncbiprotein

position:473538:-1
position: 473538
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:524536-525630:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:504307-504519:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:503198-503644:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:501865-501978:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:488948-489188:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:488583-488672:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:487792-487959:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:486772-487087:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:485298-485443:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:485108-485217:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:484034-484243:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:483386-483593:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:479835-479967:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:479357-479529:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:479060-479210:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:478679-478810:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:478503-478599:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:475915-476780:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:475499-475629:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:473538-475262:-1:exon

RPS6KA1
type: Gene
subclass of: SO_0000704
RO_0002162: 87175
gene: RPS6KA1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(554683..588459)
location: region:554683-588459:-1
so has part: feature:554683-588459:-1:exon
subclass of: SO_0000010

115912896
type: Gene
SIO_000068: ncbigene

position:554683:-1
position: 554683
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:588459:-1
position: 588459
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:554683-588459:-1:exon

RPS6KA1
type: Miscellaneous RNA
subclass of: SO_0000673
RO_0002162: 87175
gene: RPS6KA1
product: ribosomal protein S6 kinase A1, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 5 ESTs, 25 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XR_004061352.1
SIO_010081: RPS6KA1
so part of: RPS6KA1
location: complement(join(554683..554700,556461..558256,558489..558626,559008..559125,559237..559313,559620..559781,560002..560160,560588..560677,561191..561316,561756..561883,562335..562437,562775..562839,562961..563049,563269..563339,563862..564004,564109..564146,564703..564809,565413..565492,566296..566376,566646..566727,567403..567519,571288..571341,581822..581866,588324..588459))
location: region:554683-588459:-1
so has part: feature:588324-588459:-1:exon
so has part: feature:581822-581866:-1:exon
so has part: feature:571288-571341:-1:exon
so has part: feature:567403-567519:-1:exon
so has part: feature:566646-566727:-1:exon
so has part: feature:566296-566376:-1:exon
so has part: feature:565413-565492:-1:exon
so has part: feature:564703-564809:-1:exon
so has part: feature:564109-564146:-1:exon
so has part: feature:563862-564004:-1:exon
so has part: feature:563269-563339:-1:exon
so has part: feature:562961-563049:-1:exon
so has part: feature:562775-562839:-1:exon
so has part: feature:562335-562437:-1:exon
so has part: feature:561756-561883:-1:exon
so has part: feature:561191-561316:-1:exon
so has part: feature:560588-560677:-1:exon
so has part: feature:560002-560160:-1:exon
so has part: feature:559620-559781:-1:exon
so has part: feature:559237-559313:-1:exon
so has part: feature:559008-559125:-1:exon
so has part: feature:558489-558626:-1:exon
so has part: feature:556461-558256:-1:exon
so has part: feature:554683-554700:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:588324-588459:-1:exon

position:588324:-1
position: 588324
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:581822-581866:-1:exon

position:581822:-1
position: 581822
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:581866:-1
position: 581866
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:571288-571341:-1:exon

position:571288:-1
position: 571288
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:571341:-1
position: 571341
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:567403-567519:-1:exon

position:567403:-1
position: 567403
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:567519:-1
position: 567519
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:566646-566727:-1:exon

position:566646:-1
position: 566646
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:566727:-1
position: 566727
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:566296-566376:-1:exon

position:566296:-1
position: 566296
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:566376:-1
position: 566376
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:565413-565492:-1:exon

position:565413:-1
position: 565413
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:565492:-1
position: 565492
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:564703-564809:-1:exon

position:564703:-1
position: 564703
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:564809:-1
position: 564809
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:564109-564146:-1:exon

position:564109:-1
position: 564109
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:564146:-1
position: 564146
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:563862-564004:-1:exon

position:563862:-1
position: 563862
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:564004:-1
position: 564004
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:563269-563339:-1:exon

position:563269:-1
position: 563269
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:563339:-1
position: 563339
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:562961-563049:-1:exon

position:562961:-1
position: 562961
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:563049:-1
position: 563049
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:562775-562839:-1:exon

position:562775:-1
position: 562775
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:562839:-1
position: 562839
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:562335-562437:-1:exon

position:562335:-1
position: 562335
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:562437:-1
position: 562437
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:561756-561883:-1:exon

position:561756:-1
position: 561756
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:561883:-1
position: 561883
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:561191-561316:-1:exon

position:561191:-1
position: 561191
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:561316:-1
position: 561316
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:560588-560677:-1:exon

position:560588:-1
position: 560588
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:560677:-1
position: 560677
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:560002-560160:-1:exon

position:560002:-1
position: 560002
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:560160:-1
position: 560160
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:559620-559781:-1:exon

position:559620:-1
position: 559620
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:559781:-1
position: 559781
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:559237-559313:-1:exon

position:559237:-1
position: 559237
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:559313:-1
position: 559313
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:559008-559125:-1:exon

position:559008:-1
position: 559008
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:559125:-1
position: 559125
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 22
SIO_000628: feature:558489-558626:-1:exon

position:558489:-1
position: 558489
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:558626:-1
position: 558626
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 23
SIO_000628: feature:556461-558256:-1:exon

position:556461:-1
position: 556461
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:558256:-1
position: 558256
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 24
SIO_000628: feature:554683-554700:-1:exon

position:554700:-1
position: 554700
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

RPS6KA1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 87175
gene: RPS6KA1
product: ribosomal protein S6 kinase A1, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 ESTs, 9 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_030964686.1
SIO_010081: RPS6KA1
subclass of: SO_0000673
so part of: RPS6KA1
location: complement(join(555556..558256,558489..558626,559008..559125,559237..559313,559620..559781,560002..560160,560588..560677,561191..561313,561756..561883,562335..562437,562775..562839,562961..563049,563269..563339,563862..564004,564109..564146,564703..564809,565413..565492,566296..566376,566646..566727,567403..567519,571288..571341,581822..581866,588324..588455))
location: region:555556-588455:-1
so has part: feature:588324-588455:-1:exon
so has part: feature:581822-581866:-1:exon
so has part: feature:571288-571341:-1:exon
so has part: feature:567403-567519:-1:exon
so has part: feature:566646-566727:-1:exon
so has part: feature:566296-566376:-1:exon
so has part: feature:565413-565492:-1:exon
so has part: feature:564703-564809:-1:exon
so has part: feature:564109-564146:-1:exon
so has part: feature:563862-564004:-1:exon
so has part: feature:563269-563339:-1:exon
so has part: feature:562961-563049:-1:exon
so has part: feature:562775-562839:-1:exon
so has part: feature:562335-562437:-1:exon
so has part: feature:561756-561883:-1:exon
so has part: feature:561191-561313:-1:exon
so has part: feature:560588-560677:-1:exon
so has part: feature:560002-560160:-1:exon
so has part: feature:559620-559781:-1:exon
so has part: feature:559237-559313:-1:exon
so has part: feature:559008-559125:-1:exon
so has part: feature:558489-558626:-1:exon
so has part: feature:555556-558256:-1:exon

position:555556:-1
position: 555556
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:588455:-1
position: 588455
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:588324-588455:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:581822-581866:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:571288-571341:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:567403-567519:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:566646-566727:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:566296-566376:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:565413-565492:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:564703-564809:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:564109-564146:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:563862-564004:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:563269-563339:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:562961-563049:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:562775-562839:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:562335-562437:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:561756-561883:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:561191-561313:-1:exon

position:561313:-1
position: 561313
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:560588-560677:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:560002-560160:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:559620-559781:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:559237-559313:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:559008-559125:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:558489-558626:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:555556-558256:-1:exon

RPS6KA1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 87175
gene: RPS6KA1
product: ribosomal protein S6 kinase A1, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 5 ESTs, 25 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XM_030964685.1
SIO_010081: RPS6KA1
subclass of: SO_0000673
so part of: RPS6KA1
location: complement(join(555557..558256,558489..558626,559008..559125,559237..559313,559620..559781,560002..560160,560588..560677,561191..561316,561756..561883,562335..562437,562775..562839,562961..563049,563269..563339,563862..564004,564109..564146,564703..564809,565413..565492,566296..566376,566646..566727,567403..567519,571288..571341,581822..581866,588324..588459))
location: region:555557-588459:-1
so has part: feature:588324-588459:-1:exon
so has part: feature:581822-581866:-1:exon
so has part: feature:571288-571341:-1:exon
so has part: feature:567403-567519:-1:exon
so has part: feature:566646-566727:-1:exon
so has part: feature:566296-566376:-1:exon
so has part: feature:565413-565492:-1:exon
so has part: feature:564703-564809:-1:exon
so has part: feature:564109-564146:-1:exon
so has part: feature:563862-564004:-1:exon
so has part: feature:563269-563339:-1:exon
so has part: feature:562961-563049:-1:exon
so has part: feature:562775-562839:-1:exon
so has part: feature:562335-562437:-1:exon
so has part: feature:561756-561883:-1:exon
so has part: feature:561191-561316:-1:exon
so has part: feature:560588-560677:-1:exon
so has part: feature:560002-560160:-1:exon
so has part: feature:559620-559781:-1:exon
so has part: feature:559237-559313:-1:exon
so has part: feature:559008-559125:-1:exon
so has part: feature:558489-558626:-1:exon
so has part: feature:555557-558256:-1:exon

position:555557:-1
position: 555557
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:588324-588459:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:581822-581866:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:571288-571341:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:567403-567519:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:566646-566727:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:566296-566376:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:565413-565492:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:564703-564809:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:564109-564146:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:563862-564004:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:563269-563339:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:562961-563049:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:562775-562839:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:562335-562437:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:561756-561883:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:561191-561316:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:560588-560677:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:560002-560160:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:559620-559781:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:559237-559313:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:559008-559125:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:558489-558626:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:555557-558256:-1:exon

RPS6KA1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 87175
gene: RPS6KA1
product: ribosomal protein S6 kinase A1, transcript variant X5
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 ESTs, 22 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_030964688.1
SIO_010081: RPS6KA1
subclass of: SO_0000673
so part of: RPS6KA1
location: complement(join(555557..558256,558489..558626,559008..559125,559237..559313,559620..559781,560002..560160,560588..560677,561191..561316,561756..561883,562335..562437,562775..562839,562961..563049,563269..563339,563862..564004,564109..564146,564703..564809,565413..565492,566296..566376,566646..566727,567403..567519,581822..581866,588324..588455))
location: region:555557-588455:-1
so has part: feature:588324-588455:-1:exon
so has part: feature:581822-581866:-1:exon
so has part: feature:567403-567519:-1:exon
so has part: feature:566646-566727:-1:exon
so has part: feature:566296-566376:-1:exon
so has part: feature:565413-565492:-1:exon
so has part: feature:564703-564809:-1:exon
so has part: feature:564109-564146:-1:exon
so has part: feature:563862-564004:-1:exon
so has part: feature:563269-563339:-1:exon
so has part: feature:562961-563049:-1:exon
so has part: feature:562775-562839:-1:exon
so has part: feature:562335-562437:-1:exon
so has part: feature:561756-561883:-1:exon
so has part: feature:561191-561316:-1:exon
so has part: feature:560588-560677:-1:exon
so has part: feature:560002-560160:-1:exon
so has part: feature:559620-559781:-1:exon
so has part: feature:559237-559313:-1:exon
so has part: feature:559008-559125:-1:exon
so has part: feature:558489-558626:-1:exon
so has part: feature:555557-558256:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:588324-588455:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:581822-581866:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:567403-567519:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:566646-566727:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:566296-566376:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:565413-565492:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:564703-564809:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:564109-564146:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:563862-564004:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:563269-563339:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:562961-563049:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:562775-562839:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:562335-562437:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:561756-561883:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:561191-561316:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:560588-560677:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:560002-560160:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:559620-559781:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:559237-559313:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:559008-559125:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:558489-558626:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:555557-558256:-1:exon

RPS6KA1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 87175
gene: RPS6KA1
product: ribosomal protein S6 kinase A1, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 ESTs, 22 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_030964687.1
SIO_010081: RPS6KA1
subclass of: SO_0000673
so part of: RPS6KA1
location: complement(join(555557..558256,558489..558626,559008..559125,559237..559313,559620..559781,560002..560160,560588..560677,561191..561316,561756..561883,562335..562437,562775..562839,562961..563049,563269..563339,563862..564004,564109..564146,564703..564809,565413..565492,566296..566376,566646..566727,567403..567519,571288..571341,588324..588453))
location: region:555557-588453:-1
so has part: feature:588324-588453:-1:exon
so has part: feature:571288-571341:-1:exon
so has part: feature:567403-567519:-1:exon
so has part: feature:566646-566727:-1:exon
so has part: feature:566296-566376:-1:exon
so has part: feature:565413-565492:-1:exon
so has part: feature:564703-564809:-1:exon
so has part: feature:564109-564146:-1:exon
so has part: feature:563862-564004:-1:exon
so has part: feature:563269-563339:-1:exon
so has part: feature:562961-563049:-1:exon
so has part: feature:562775-562839:-1:exon
so has part: feature:562335-562437:-1:exon
so has part: feature:561756-561883:-1:exon
so has part: feature:561191-561316:-1:exon
so has part: feature:560588-560677:-1:exon
so has part: feature:560002-560160:-1:exon
so has part: feature:559620-559781:-1:exon
so has part: feature:559237-559313:-1:exon
so has part: feature:559008-559125:-1:exon
so has part: feature:558489-558626:-1:exon
so has part: feature:555557-558256:-1:exon

position:588453:-1
position: 588453
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:588324-588453:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:571288-571341:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:567403-567519:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:566646-566727:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:566296-566376:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:565413-565492:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:564703-564809:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:564109-564146:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:563862-564004:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:563269-563339:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:562961-563049:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:562775-562839:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:562335-562437:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:561756-561883:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:561191-561316:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:560588-560677:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:560002-560160:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:559620-559781:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:559237-559313:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:559008-559125:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:558489-558626:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:555557-558256:-1:exon

RPS6KA1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 87175
gene: RPS6KA1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: ribosomal protein S6 kinase alpha-1 isoform X3
translation: MPLAQLAEPWPDMELVHLDTEAKSDITWLEKDLVDSADKGEGVVQEINITHHVKEGSEKADPSQFELLKVLGQGSFGKVFLVRKITPPDTNHLYAMKVLKKATLKVRDRLRTKIERDILADVNHPFVVKLHYAFQTEGKLYLILDFLRGGDLFTRLSKEVMFTEEDVKFYLAELALGLDHLHSLGIIYRDLKPENILLDEEGHIKLTDFGLSKEAIDHEKKAYSFCGTVEYMAPEVVNRQGHSHSADWWSYGVLMFEMLTGALPFQGKDRKETMTLILKAKLGMPQFLSAEAQSLLRALFKRNPANRLGSGPDGAEEIKRHPFYSTIDWNKLYRREIKPPFKPAVGQPDDTFYFDTEFTSRTPKDSPGVPPSAGAHQLFRGFSFVATGLMEDGKVHPPQPALNSVVQQLHGKNVQFSDGYVVKEAIGVGSYSVCKRCIHKATNMEYAVKVIDKSKRDPSEEIEILLRYGQHPNIITLKDVYDDGKYVYLVTELMRGGELLDKILRQKFFSEREASSVLHMICKTVEYLHSQGVVHRDLKPSNILYVDKSGNPESIRICDFGFAKQLRAENGLLMTPCYTANFVAPEVLKRQGYDEGCDIWSLGVLLYTMLAGCTPFANGPSDTPEEILTRIGGGKFSISGGNWDTISDMAKDLVSKMLHVDPHQRLTAKQVLQHPWITQKDSLPQSQLNHQDIQLVKGAMAATYSALNSSKPSPQLKPIESSILAQRRVKKLPSTTL
SIO_010081: RPS6KA1
subclass of: SO_0000673
so part of: RPS6KA1
location: complement(join(558134..558256,558489..558626,559008..559125,559237..559313,559620..559781,560002..560160,560588..560677,561191..561316,561756..561883,562335..562437,562775..562839,562961..563049,563269..563339,563862..564004,564109..564146,564703..564809,565413..565492,566296..566376,566646..566727,567403..567519,571288..571341,588324..588386))
location: region:558134-588386:-1
so has part: feature:588324-588386:-1:exon
so has part: feature:571288-571341:-1:exon
so has part: feature:567403-567519:-1:exon
so has part: feature:566646-566727:-1:exon
so has part: feature:566296-566376:-1:exon
so has part: feature:565413-565492:-1:exon
so has part: feature:564703-564809:-1:exon
so has part: feature:564109-564146:-1:exon
so has part: feature:563862-564004:-1:exon
so has part: feature:563269-563339:-1:exon
so has part: feature:562961-563049:-1:exon
so has part: feature:562775-562839:-1:exon
so has part: feature:562335-562437:-1:exon
so has part: feature:561756-561883:-1:exon
so has part: feature:561191-561316:-1:exon
so has part: feature:560588-560677:-1:exon
so has part: feature:560002-560160:-1:exon
so has part: feature:559620-559781:-1:exon
so has part: feature:559237-559313:-1:exon
so has part: feature:559008-559125:-1:exon
so has part: feature:558489-558626:-1:exon
so has part: feature:558134-558256:-1:exon

XP_030820547.1
type: Protein
SIO_000068: ncbiprotein

position:558134:-1
position: 558134
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:588386:-1
position: 588386
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:588324-588386:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:571288-571341:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:567403-567519:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:566646-566727:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:566296-566376:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:565413-565492:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:564703-564809:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:564109-564146:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:563862-564004:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:563269-563339:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:562961-563049:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:562775-562839:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:562335-562437:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:561756-561883:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:561191-561316:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:560588-560677:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:560002-560160:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:559620-559781:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:559237-559313:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:559008-559125:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:558489-558626:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:558134-558256:-1:exon

RPS6KA1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 87175
gene: RPS6KA1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: ribosomal protein S6 kinase alpha-1 isoform X4
translation: MPLAQLAEPWPDMELVHLDTENGQPAPEEGGNPPCQGEGVVQEINITHHVKEGSEKADPSQFELLKVLGQGSFGKVFLVRKITPPDTNHLYAMKVLKKATLKVRDRLRTKIERDILADVNHPFVVKLHYAFQTEGKLYLILDFLRGGDLFTRLSKEVMFTEEDVKFYLAELALGLDHLHSLGIIYRDLKPENILLDEEGHIKLTDFGLSKEAIDHEKKAYSFCGTVEYMAPEVVNRQGHSHSADWWSYGVLMFEMLTGALPFQGKDRKETMTLILKAKLGMPQFLSAEAQSLLRALFKRNPANRLGSGPDGAEEIKRHPFYSTIDWNKLYRREIKPPFKPAVGQPDDTFYFDTEFTSRTPKDSPGVPPSAGAHQLFRGFSFVATGLMEDGKVHPPQPALNSVVQQLHGKNVQFSDGYVVKEAIGVGSYSVCKRCIHKATNMEYAVKVIDKSKRDPSEEIEILLRYGQHPNIITLKDVYDDGKYVYLVTELMRGGELLDKILRQKFFSEREASSVLHMICKTVEYLHSQGVVHRDLKPSNILYVDKSGNPESIRICDFGFAKQLRAENGLLMTPCYTANFVAPEVLKRQGYDEGCDIWSLGVLLYTMLAGCTPFANGPSDTPEEILTRIGGGKFSISGGNWDTISDMAKDLVSKMLHVDPHQRLTAKQVLQHPWITQKDSLPQSQLNHQDIQLVKGAMAATYSALNSSKPSPQLKPIESSILAQRRVKKLPSTTL
SIO_010081: RPS6KA1
subclass of: SO_0000673
so part of: RPS6KA1
location: complement(join(558134..558256,558489..558626,559008..559125,559237..559313,559620..559781,560002..560160,560588..560677,561191..561316,561756..561883,562335..562437,562775..562839,562961..563049,563269..563339,563862..564004,564109..564146,564703..564809,565413..565492,566296..566376,566646..566727,567403..567519,581822..581866,588324..588386))
location: region:558134-588386:-1
so has part: feature:588324-588386:-1:exon
so has part: feature:581822-581866:-1:exon
so has part: feature:567403-567519:-1:exon
so has part: feature:566646-566727:-1:exon
so has part: feature:566296-566376:-1:exon
so has part: feature:565413-565492:-1:exon
so has part: feature:564703-564809:-1:exon
so has part: feature:564109-564146:-1:exon
so has part: feature:563862-564004:-1:exon
so has part: feature:563269-563339:-1:exon
so has part: feature:562961-563049:-1:exon
so has part: feature:562775-562839:-1:exon
so has part: feature:562335-562437:-1:exon
so has part: feature:561756-561883:-1:exon
so has part: feature:561191-561316:-1:exon
so has part: feature:560588-560677:-1:exon
so has part: feature:560002-560160:-1:exon
so has part: feature:559620-559781:-1:exon
so has part: feature:559237-559313:-1:exon
so has part: feature:559008-559125:-1:exon
so has part: feature:558489-558626:-1:exon
so has part: feature:558134-558256:-1:exon

XP_030820548.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:588324-588386:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:581822-581866:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:567403-567519:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:566646-566727:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:566296-566376:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:565413-565492:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:564703-564809:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:564109-564146:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:563862-564004:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:563269-563339:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:562961-563049:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:562775-562839:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:562335-562437:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:561756-561883:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:561191-561316:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:560588-560677:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:560002-560160:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:559620-559781:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:559237-559313:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:559008-559125:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:558489-558626:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:558134-558256:-1:exon

RPS6KA1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 87175
gene: RPS6KA1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: ribosomal protein S6 kinase alpha-1 isoform X2
translation: MPLAQLAEPWPDMELVHLDTENGQPAPEEGGNPPCQAKSDITWLEKDLVDSADKGEGVVQEINITHHVKEGSEKADPSQFELLKVLGQGSFGKVFLVRKITPPDTNHLYAMKVLKKATLKVRDRLRTKIERDILADVNHPFVVKLHYAFQTEGKLYLILDFLRGGDLFTRLSKEVMFTEEDVKFYLAELALGLDHLHSLGIIYRDLKPENILLDEEGHIKLTDFGLSKEAIDHEKKAYSFCGTVEYMAPEVVNRQGHSHSADWWSYGVLMFEMLTGALPFQGKDRKETMTLILKAKLGMPQFLSAEAQSLLRALFKRNPANRLGSGPDGAEEIKRHPFYSTIDWNKLYRREIKPPFKPAVGQPDDTFYFDTEFTSRTPKDSPGVPPSAGAHQLFRGFSFVATGLMEDGKVHPPQPALNSVVQLHGKNVQFSDGYVVKEAIGVGSYSVCKRCIHKATNMEYAVKVIDKSKRDPSEEIEILLRYGQHPNIITLKDVYDDGKYVYLVTELMRGGELLDKILRQKFFSEREASSVLHMICKTVEYLHSQGVVHRDLKPSNILYVDKSGNPESIRICDFGFAKQLRAENGLLMTPCYTANFVAPEVLKRQGYDEGCDIWSLGVLLYTMLAGCTPFANGPSDTPEEILTRIGGGKFSISGGNWDTISDMAKDLVSKMLHVDPHQRLTAKQVLQHPWITQKDSLPQSQLNHQDIQLVKGAMAATYSALNSSKPSPQLKPIESSILAQRRVKKLPSTTL
SIO_010081: RPS6KA1
subclass of: SO_0000673
so part of: RPS6KA1
location: complement(join(558134..558256,558489..558626,559008..559125,559237..559313,559620..559781,560002..560160,560588..560677,561191..561313,561756..561883,562335..562437,562775..562839,562961..563049,563269..563339,563862..564004,564109..564146,564703..564809,565413..565492,566296..566376,566646..566727,567403..567519,571288..571341,581822..581866,588324..588386))
location: region:558134-588386:-1
so has part: feature:588324-588386:-1:exon
so has part: feature:581822-581866:-1:exon
so has part: feature:571288-571341:-1:exon
so has part: feature:567403-567519:-1:exon
so has part: feature:566646-566727:-1:exon
so has part: feature:566296-566376:-1:exon
so has part: feature:565413-565492:-1:exon
so has part: feature:564703-564809:-1:exon
so has part: feature:564109-564146:-1:exon
so has part: feature:563862-564004:-1:exon
so has part: feature:563269-563339:-1:exon
so has part: feature:562961-563049:-1:exon
so has part: feature:562775-562839:-1:exon
so has part: feature:562335-562437:-1:exon
so has part: feature:561756-561883:-1:exon
so has part: feature:561191-561313:-1:exon
so has part: feature:560588-560677:-1:exon
so has part: feature:560002-560160:-1:exon
so has part: feature:559620-559781:-1:exon
so has part: feature:559237-559313:-1:exon
so has part: feature:559008-559125:-1:exon
so has part: feature:558489-558626:-1:exon
so has part: feature:558134-558256:-1:exon

XP_030820546.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:588324-588386:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:581822-581866:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:571288-571341:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:567403-567519:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:566646-566727:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:566296-566376:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:565413-565492:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:564703-564809:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:564109-564146:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:563862-564004:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:563269-563339:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:562961-563049:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:562775-562839:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:562335-562437:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:561756-561883:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:561191-561313:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:560588-560677:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:560002-560160:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:559620-559781:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:559237-559313:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:559008-559125:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:558489-558626:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:558134-558256:-1:exon

RPS6KA1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 87175
gene: RPS6KA1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: ribosomal protein S6 kinase alpha-1 isoform X1
translation: MPLAQLAEPWPDMELVHLDTENGQPAPEEGGNPPCQAKSDITWLEKDLVDSADKGEGVVQEINITHHVKEGSEKADPSQFELLKVLGQGSFGKVFLVRKITPPDTNHLYAMKVLKKATLKVRDRLRTKIERDILADVNHPFVVKLHYAFQTEGKLYLILDFLRGGDLFTRLSKEVMFTEEDVKFYLAELALGLDHLHSLGIIYRDLKPENILLDEEGHIKLTDFGLSKEAIDHEKKAYSFCGTVEYMAPEVVNRQGHSHSADWWSYGVLMFEMLTGALPFQGKDRKETMTLILKAKLGMPQFLSAEAQSLLRALFKRNPANRLGSGPDGAEEIKRHPFYSTIDWNKLYRREIKPPFKPAVGQPDDTFYFDTEFTSRTPKDSPGVPPSAGAHQLFRGFSFVATGLMEDGKVHPPQPALNSVVQQLHGKNVQFSDGYVVKEAIGVGSYSVCKRCIHKATNMEYAVKVIDKSKRDPSEEIEILLRYGQHPNIITLKDVYDDGKYVYLVTELMRGGELLDKILRQKFFSEREASSVLHMICKTVEYLHSQGVVHRDLKPSNILYVDKSGNPESIRICDFGFAKQLRAENGLLMTPCYTANFVAPEVLKRQGYDEGCDIWSLGVLLYTMLAGCTPFANGPSDTPEEILTRIGGGKFSISGGNWDTISDMAKDLVSKMLHVDPHQRLTAKQVLQHPWITQKDSLPQSQLNHQDIQLVKGAMAATYSALNSSKPSPQLKPIESSILAQRRVKKLPSTTL
SIO_010081: RPS6KA1
subclass of: SO_0000673
so part of: RPS6KA1
location: complement(join(558134..558256,558489..558626,559008..559125,559237..559313,559620..559781,560002..560160,560588..560677,561191..561316,561756..561883,562335..562437,562775..562839,562961..563049,563269..563339,563862..564004,564109..564146,564703..564809,565413..565492,566296..566376,566646..566727,567403..567519,571288..571341,581822..581866,588324..588386))
location: region:558134-588386:-1
so has part: feature:588324-588386:-1:exon
so has part: feature:581822-581866:-1:exon
so has part: feature:571288-571341:-1:exon
so has part: feature:567403-567519:-1:exon
so has part: feature:566646-566727:-1:exon
so has part: feature:566296-566376:-1:exon
so has part: feature:565413-565492:-1:exon
so has part: feature:564703-564809:-1:exon
so has part: feature:564109-564146:-1:exon
so has part: feature:563862-564004:-1:exon
so has part: feature:563269-563339:-1:exon
so has part: feature:562961-563049:-1:exon
so has part: feature:562775-562839:-1:exon
so has part: feature:562335-562437:-1:exon
so has part: feature:561756-561883:-1:exon
so has part: feature:561191-561316:-1:exon
so has part: feature:560588-560677:-1:exon
so has part: feature:560002-560160:-1:exon
so has part: feature:559620-559781:-1:exon
so has part: feature:559237-559313:-1:exon
so has part: feature:559008-559125:-1:exon
so has part: feature:558489-558626:-1:exon
so has part: feature:558134-558256:-1:exon

XP_030820545.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:588324-588386:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:581822-581866:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:571288-571341:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:567403-567519:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:566646-566727:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:566296-566376:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:565413-565492:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:564703-564809:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:564109-564146:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:563862-564004:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:563269-563339:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:562961-563049:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:562775-562839:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:562335-562437:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:561756-561883:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:561191-561316:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:560588-560677:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:560002-560160:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:559620-559781:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:559237-559313:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:559008-559125:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:558489-558626:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:558134-558256:-1:exon

HMGN2
type: Gene
subclass of: SO_0000704
RO_0002162: 87175
gene: HMGN2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(601452..604834)
location: region:601452-604834:-1
so has part: feature:601452-604834:-1:exon
subclass of: SO_0000010

115912867
type: Gene
SIO_000068: ncbigene

position:601452:-1
position: 601452
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:604834:-1
position: 604834
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:601452-604834:-1:exon

HMGN2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 87175
gene: HMGN2
product: high mobility group nucleosomal binding domain 2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 12 ESTs, 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
transcript id: XM_030964650.1
SIO_010081: HMGN2
subclass of: SO_0000673
so part of: HMGN2
location: complement(join(601452..602318,602668..602763,603086..603136,603668..603697,604101..604145,604680..604834))
location: region:601452-604834:-1
so has part: feature:604680-604834:-1:exon
so has part: feature:604101-604145:-1:exon
so has part: feature:603668-603697:-1:exon
so has part: feature:603086-603136:-1:exon
so has part: feature:602668-602763:-1:exon
so has part: feature:601452-602318:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:604680-604834:-1:exon

position:604680:-1
position: 604680
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:604101-604145:-1:exon

position:604101:-1
position: 604101
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:604145:-1
position: 604145
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:603668-603697:-1:exon

position:603668:-1
position: 603668
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:603697:-1
position: 603697
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:603086-603136:-1:exon

position:603086:-1
position: 603086
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:603136:-1
position: 603136
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:602668-602763:-1:exon

position:602668:-1
position: 602668
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:602763:-1
position: 602763
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:601452-602318:-1:exon

position:602318:-1
position: 602318
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

HMGN2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 87175
gene: HMGN2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: non-histone chromosomal protein HMG-17
translation: MPKRKAEGETKGDKAKVKDEPQRRSARLSAKPAPPKPEPKPKKAAPKKSEKVPKGKKGKADAGKEGNNPAENGDAKTDQAQKAEGAGEAK
SIO_010081: HMGN2
subclass of: SO_0000673
so part of: HMGN2
location: complement(join(602283..602318,602668..602763,603086..603136,603668..603697,604101..604145,604680..604694))
location: region:602283-604694:-1
so has part: feature:604680-604694:-1:exon
so has part: feature:604101-604145:-1:exon
so has part: feature:603668-603697:-1:exon
so has part: feature:603086-603136:-1:exon
so has part: feature:602668-602763:-1:exon
so has part: feature:602283-602318:-1:exon

XP_030820510.1
type: Protein
SIO_000068: ncbiprotein

position:602283:-1
position: 602283
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:604694:-1
position: 604694
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:604680-604694:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:604101-604145:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:603668-603697:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:603086-603136:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:602668-602763:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:602283-602318:-1:exon

DHDDS
type: Gene
subclass of: SO_0000704
RO_0002162: 87175
gene: DHDDS
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(606566..616097)
location: region:606566-616097:-1
so has part: feature:606566-616097:-1:exon
subclass of: SO_0000010

115912868
type: Gene
SIO_000068: ncbigene

position:606566:-1
position: 606566
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:616097:-1
position: 616097
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:606566-616097:-1:exon

DHDDS
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 87175
gene: DHDDS
product: dehydrodolichyl diphosphate synthase subunit
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 9 ESTs, 14 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XM_030964651.1
SIO_010081: DHDDS
subclass of: SO_0000673
so part of: DHDDS
location: complement(join(606566..608012,610793..610900,612034..612148,612801..612902,613076..613192,613800..613942,614467..614583,615039..615122,616039..616097))
location: region:606566-616097:-1
so has part: feature:616039-616097:-1:exon
so has part: feature:615039-615122:-1:exon
so has part: feature:614467-614583:-1:exon
so has part: feature:613800-613942:-1:exon
so has part: feature:613076-613192:-1:exon
so has part: feature:612801-612902:-1:exon
so has part: feature:612034-612148:-1:exon
so has part: feature:610793-610900:-1:exon
so has part: feature:606566-608012:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:616039-616097:-1:exon

position:616039:-1
position: 616039
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:615039-615122:-1:exon

position:615039:-1
position: 615039
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:615122:-1
position: 615122
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:614467-614583:-1:exon

position:614467:-1
position: 614467
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:614583:-1
position: 614583
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:613800-613942:-1:exon

position:613800:-1
position: 613800
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:613942:-1
position: 613942
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:613076-613192:-1:exon

position:613076:-1
position: 613076
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:613192:-1
position: 613192
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:612801-612902:-1:exon

position:612801:-1
position: 612801
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:612902:-1
position: 612902
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:612034-612148:-1:exon

position:612034:-1
position: 612034
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:612148:-1
position: 612148
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:610793-610900:-1:exon

position:610793:-1
position: 610793
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:610900:-1
position: 610900
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:606566-608012:-1:exon

position:608012:-1
position: 608012
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

DHDDS
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 87175
gene: DHDDS
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: dehydrodolichyl diphosphate synthase complex subunit DHDDS
translation: MSWIREGELTIIERFCANIIKAGPMPKHVAFIMDGNRRYAQKCHVERQQGHSQGFDKLAQTLRWCLNLGIQEVTVYAFSIENFKRSKEEVDGLMDLARQKFSRLLEEQENLKKHGVCIRVLGDLPLLPVDIQELIAQAVLATRNYNKCFLNVCFAYTSRHEISNAVREMAWGVEQGLLEPSDVSESLLDKCLYTNNSPDPDLLIRTSGEVRLSDFLLWQTSHSCLVFQSVLWPEYSFWNLCEAILQFQMNYSALQKARDSYLEERRQQQLERDQAYVSKKLQQEGCVSHGDSRRRRTLLQKCTALREERIQGFLQALEHKRADFLERLCPVSA
SIO_010081: DHDDS
subclass of: SO_0000673
so part of: DHDDS
location: complement(join(607776..608012,610793..610900,612034..612148,612801..612902,613076..613192,613800..613942,614467..614583,615039..615101))
location: region:607776-615101:-1
so has part: feature:615039-615101:-1:exon
so has part: feature:614467-614583:-1:exon
so has part: feature:613800-613942:-1:exon
so has part: feature:613076-613192:-1:exon
so has part: feature:612801-612902:-1:exon
so has part: feature:612034-612148:-1:exon
so has part: feature:610793-610900:-1:exon
so has part: feature:607776-608012:-1:exon

XP_030820511.1
type: Protein
SIO_000068: ncbiprotein

position:607776:-1
position: 607776
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:615101:-1
position: 615101
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:615039-615101:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:614467-614583:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:613800-613942:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:613076-613192:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:612801-612902:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:612034-612148:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:610793-610900:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:607776-608012:-1:exon

LIN28A
type: Gene
subclass of: SO_0000704
RO_0002162: 87175
gene: LIN28A
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(620079..631331)
location: region:620079-631331:-1
so has part: feature:620079-631331:-1:exon
subclass of: SO_0000010

115912895
type: Gene
SIO_000068: ncbigene

position:620079:-1
position: 620079
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:631331:-1
position: 631331
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:620079-631331:-1:exon

LIN28A
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 87175
gene: LIN28A
product: lin-28 homolog A
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 mRNAs, 18 Proteins
transcript id: XM_030964684.1
SIO_010081: LIN28A
subclass of: SO_0000673
so part of: LIN28A
location: complement(join(620079..620370,621323..621507,630230..630408,631195..631331))
location: region:620079-631331:-1
so has part: feature:631195-631331:-1:exon
so has part: feature:630230-630408:-1:exon
so has part: feature:621323-621507:-1:exon
so has part: feature:620079-620370:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:631195-631331:-1:exon

position:631195:-1
position: 631195
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:630230-630408:-1:exon

position:630230:-1
position: 630230
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:630408:-1
position: 630408
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:621323-621507:-1:exon

position:621323:-1
position: 621323
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:621507:-1
position: 621507
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:620079-620370:-1:exon

position:620370:-1
position: 620370
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LIN28A
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 87175
gene: LIN28A
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protein lin-28 homolog A
translation: MGSVSNQQFAGAKPGEEPAGDSPKAENESQPLHGSGICKWFNVRMGFGFLSMTAKGGATLDSPVDVFVHQSKLHMEGFRSLKEGEAVEFTFKKSSKGLESIRVTGPGGVFCVGSERRPKGKSLQKRRSKGDRCYNCGGLDHHAKECKLPPQPKKCHFCQSISHMVANCPAKAQQSPSSQGKPAYFREEEDMHSPALLPESRE
SIO_010081: LIN28A
subclass of: SO_0000673
so part of: LIN28A
location: complement(join(620157..620370,621323..621507,630230..630408,631195..631225))
location: region:620157-631225:-1
so has part: feature:631195-631225:-1:exon
so has part: feature:630230-630408:-1:exon
so has part: feature:621323-621507:-1:exon
so has part: feature:620157-620370:-1:exon

XP_030820544.1
type: Protein
SIO_000068: ncbiprotein

position:620157:-1
position: 620157
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:631225:-1
position: 631225
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:631195-631225:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:630230-630408:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:621323-621507:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:620157-620370:-1:exon

CRYBG2
type: Gene
subclass of: SO_0000704
RO_0002162: 87175
gene: CRYBG2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 640307..647740
location: region:640307-647740:1
so has part: feature:640307-647740:1:exon
subclass of: SO_0000010

115912699
type: Gene
SIO_000068: ncbigene

position:640307:1
position: 640307
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:647740:1
position: 647740
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:640307-647740:1:exon

CRYBG2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 87175
gene: CRYBG2
product: crystallin beta-gamma domain containing 2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 89% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_030964360.1
SIO_010081: CRYBG2
subclass of: SO_0000673
so part of: CRYBG2
location: join(640307..640392,640517..641903,642423..642470,642544..642662,642860..642946,643012..643051,643130..643269,643356..643482,643756..643791,643886..644013,644189..644315,644587..644729,644795..644921,645009..645041,645134..645246,645325..645454,645746..645885,645981..646104,646673..646831,647124..647283,647392..647740)
location: region:640307-647740:1
so has part: feature:640307-640392:1:exon
so has part: feature:640517-641903:1:exon
so has part: feature:642423-642470:1:exon
so has part: feature:642544-642662:1:exon
so has part: feature:642860-642946:1:exon
so has part: feature:643012-643051:1:exon
so has part: feature:643130-643269:1:exon
so has part: feature:643356-643482:1:exon
so has part: feature:643756-643791:1:exon
so has part: feature:643886-644013:1:exon
so has part: feature:644189-644315:1:exon
so has part: feature:644587-644729:1:exon
so has part: feature:644795-644921:1:exon
so has part: feature:645009-645041:1:exon
so has part: feature:645134-645246:1:exon
so has part: feature:645325-645454:1:exon
so has part: feature:645746-645885:1:exon
so has part: feature:645981-646104:1:exon
so has part: feature:646673-646831:1:exon
so has part: feature:647124-647283:1:exon
so has part: feature:647392-647740:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:640307-640392:1:exon

position:640392:1
position: 640392
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:640517-641903:1:exon

position:640517:1
position: 640517
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:641903:1
position: 641903
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:642423-642470:1:exon

position:642423:1
position: 642423
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:642470:1
position: 642470
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:642544-642662:1:exon

position:642544:1
position: 642544
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:642662:1
position: 642662
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:642860-642946:1:exon

position:642860:1
position: 642860
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:642946:1
position: 642946
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:643012-643051:1:exon

position:643012:1
position: 643012
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:643051:1
position: 643051
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:643130-643269:1:exon

position:643130:1
position: 643130
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:643269:1
position: 643269
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:643356-643482:1:exon

position:643356:1
position: 643356
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:643482:1
position: 643482
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:643756-643791:1:exon

position:643756:1
position: 643756
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:643791:1
position: 643791
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:643886-644013:1:exon

position:643886:1
position: 643886
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:644013:1
position: 644013
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:644189-644315:1:exon

position:644189:1
position: 644189
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:644315:1
position: 644315
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:644587-644729:1:exon

position:644587:1
position: 644587
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:644729:1
position: 644729
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:644795-644921:1:exon

position:644795:1
position: 644795
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:644921:1
position: 644921
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:645009-645041:1:exon

position:645009:1
position: 645009
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:645041:1
position: 645041
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:645134-645246:1:exon

position:645134:1
position: 645134
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:645246:1
position: 645246
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:645325-645454:1:exon

position:645325:1
position: 645325
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:645454:1
position: 645454
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:645746-645885:1:exon

position:645746:1
position: 645746
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:645885:1
position: 645885
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:645981-646104:1:exon

position:645981:1
position: 645981
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:646104:1
position: 646104
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:646673-646831:1:exon

position:646673:1
position: 646673
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:646831:1
position: 646831
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:647124-647283:1:exon

position:647124:1
position: 647124
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:647283:1
position: 647283
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:647392-647740:1:exon

position:647392:1
position: 647392
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

CRYBG2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 87175
gene: CRYBG2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: beta/gamma crystallin domain-containing protein 2
translation: MPRRSGPGARTSGARGGPAGTAPPPRRRRARQVTVLRTGRDAEGRGAPNGTHGTAGATAAASARRDSPAQQGSGSAGAAAGTESSPGSAEAAGPLEEAPPEEKDSAQAEPAPGQAAPGAGDPQSSASSSPQCPSAGQAAPAGTGEGSVADVDGTVPDTPARTESPPGAGNTPETPPAEASDGPEPSSETAASAKAETELEGDERMAEPQGTAQEPESIPEPPSEPPAPEPPAESPPDASEEDPELLVDMEIFVDTLRNMEPSEMRKAPKAPRQPRPWALGRCAALPPIHEHRVAPRAPLSLPQALRELLARGPAPARPQEPPEEEEEIENPYLSPEERAAAGNRRGVPGDGVGGEGWVEGGSLLGALGEDGNAKVAAERSVPFRGNVLKGMALLSHFLEQRAAGAEEGKPYSRLDKSVLYSRFVPPGAALLQLPHGSGGSDPPCPRDHNGLGPGGQPGPEVAALEALSSGSVPAVPEEPESAVTLSLEPVLQEDKEGLEKINTRPGKIILYSDGGFAGQKREIWDDIPDATSWELSHTISIRVIRGGWVMYEKPRFRGRKCVLAEGDVEIDNPWTARPFRIGSFKRVVRDYRTPQISLFAQENGEGARLRFSGSAEDTRERGQALAAASIIVHSGLWLLYSKPFFDDDPYVLEPGGYPNLKAWGAKEPSICSMHPIRLGCPVVERPGEPQVLIYEAAAFQGRSFTISRDIYDLRRLPEPALPTVGSLRVLGGCWVGYEKEGFRGHQYLLEEGEYQDWRQWGGYSQELVSLRLIRTDFSDPALVLFEAMDFEEGASVELSEALPDTGLAGYGSITQSIHVLSGVWVAYEGPNYSGEQYILEKGVYRSCEDWGATDCHIASAQPILQVREHNLHFVSKILLFSEPDFLGDHVAFEEDQEALPQGFAPRSCRVRGGSWILFDGQDFTGEQHVLSEGEYPTLSAMGCLCSTAICSLRKVPLFFSEPSIFLHGLECFEGKEIELNSEVRSLQAEGFNNHVLSVRVKGGIWVLCEHGDFRGRQWLLDCTEITNWLTYSGLQHVGSLYPIRQKGLFFNVRSRELQLFLSVPDDVEDMKAGRVVVSSLSEQSSSVWYYEDGLIKNQVAPTMSLQVIGPAGKGAKAVLWSETRLPRQTWSVDCQGRIHSQMFEDMILDIKGGHSYDRDHAIVWDMAEERPTQIWDIQVL
SIO_010081: CRYBG2
subclass of: SO_0000673
so part of: CRYBG2
location: join(640307..640392,640517..641903,642423..642470,642544..642662,642860..642946,643012..643051,643130..643269,643356..643482,643756..643791,643886..644013,644189..644315,644587..644729,644795..644921,645009..645041,645134..645246,645325..645454,645746..645885,645981..646104,646673..646831,647124..647283,647392..647480)
location: region:640307-647480:1
so has part: feature:640307-640392:1:exon
so has part: feature:640517-641903:1:exon
so has part: feature:642423-642470:1:exon
so has part: feature:642544-642662:1:exon
so has part: feature:642860-642946:1:exon
so has part: feature:643012-643051:1:exon
so has part: feature:643130-643269:1:exon
so has part: feature:643356-643482:1:exon
so has part: feature:643756-643791:1:exon
so has part: feature:643886-644013:1:exon
so has part: feature:644189-644315:1:exon
so has part: feature:644587-644729:1:exon
so has part: feature:644795-644921:1:exon
so has part: feature:645009-645041:1:exon
so has part: feature:645134-645246:1:exon
so has part: feature:645325-645454:1:exon
so has part: feature:645746-645885:1:exon
so has part: feature:645981-646104:1:exon
so has part: feature:646673-646831:1:exon
so has part: feature:647124-647283:1:exon
so has part: feature:647392-647480:1:exon

XP_030820220.1
type: Protein
SIO_000068: ncbiprotein

position:647480:1
position: 647480
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:640307-640392:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:640517-641903:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:642423-642470:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:642544-642662:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:642860-642946:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:643012-643051:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:643130-643269:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:643356-643482:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:643756-643791:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:643886-644013:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:644189-644315:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:644587-644729:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:644795-644921:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:645009-645041:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:645134-645246:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:645325-645454:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:645746-645885:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:645981-646104:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:646673-646831:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:647124-647283:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:647392-647480:1:exon

UBXN11
type: Gene
subclass of: SO_0000704
RO_0002162: 87175
gene: UBXN11
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 651945..>660863
location: region:651945-660863:1
so has part: feature:651945-660863:1:exon
subclass of: SO_0000010

115912931
type: Gene
SIO_000068: ncbigene

position:651945:1
position: 651945
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:660863:1
position: 660863
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition

urn:…
SIO_000300: 1
SIO_000628: feature:651945-660863:1:exon

UBXN11
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 87175
gene: UBXN11
product: UBX domain protein 11
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 15% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_030964739.1
SIO_010081: UBXN11
subclass of: SO_0000673
so part of: UBXN11
location: join(651945..652046,652794..652848,654317..654393,654799..654913,656055..656275,656914..656991,657747..657867,658872..658966,659195..659268,659951..660091,660716..>660863)
location: region:651945-660863:1
so has part: feature:651945-652046:1:exon
so has part: feature:652794-652848:1:exon
so has part: feature:654317-654393:1:exon
so has part: feature:654799-654913:1:exon
so has part: feature:656055-656275:1:exon
so has part: feature:656914-656991:1:exon
so has part: feature:657747-657867:1:exon
so has part: feature:658872-658966:1:exon
so has part: feature:659195-659268:1:exon
so has part: feature:659951-660091:1:exon
so has part: feature:660716-660863:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:651945-652046:1:exon

position:652046:1
position: 652046
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:652794-652848:1:exon

position:652794:1
position: 652794
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:652848:1
position: 652848
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:654317-654393:1:exon

position:654317:1
position: 654317
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:654393:1
position: 654393
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:654799-654913:1:exon

position:654799:1
position: 654799
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:654913:1
position: 654913
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:656055-656275:1:exon

position:656055:1
position: 656055
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:656275:1
position: 656275
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:656914-656991:1:exon

position:656914:1
position: 656914
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:656991:1
position: 656991
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:657747-657867:1:exon

position:657747:1
position: 657747
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:657867:1
position: 657867
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:658872-658966:1:exon

position:658872:1
position: 658872
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:658966:1
position: 658966
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:659195-659268:1:exon

position:659195:1
position: 659195
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:659268:1
position: 659268
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:659951-660091:1:exon

position:659951:1
position: 659951
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:660091:1
position: 660091
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:660716-660863:1:exon

position:660716:1
position: 660716
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

UBXN11
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 87175
gene: UBXN11
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: UBX domain-containing protein 11
translation: MELVSSLAEKISLLEQKVDKQAQEIQLKDRRIAELEEKIKTLQEEEGAPDPRSTEELELRCLQLQSQVWEMERFLSDYGLVWVGEAREQPEEPGAARDGEEPPAGSLCRPGEAVLCEQQIDFDLILEHIKDLNSLVGEGSSQVEQTLRGARLRWAEPLPVTLYRDGITVGQHGAFRPYQHPATQQCLQDIMDGYFPSELQPRYPDGVPLQVSDRRDVMFQKPDLPGSFPGLGHVVGTSESSRVQETSRIPGPKGSWERDPSEVSQPLKHRGSVGSTQGAAPQGSDGQQSSEEMLLETPGLAALEGYRVKAAEEAGAPGLCRLRVRSESGEQTYELRMLLTDTIGDLRQLLAHLRGGNSDYEIISTFPQRVYTDSSRSLQECGLVPRASLLLRRRDPPQQQGRG
SIO_010081: UBXN11
subclass of: SO_0000673
so part of: UBXN11
location: join(651963..652046,652794..652848,654317..654393,654799..654913,656055..656275,656914..656991,657747..657867,658872..658966,659195..659268,659951..660091,660716..>660863)
location: region:651963-660863:1
so has part: feature:651963-652046:1:exon
so has part: feature:652794-652848:1:exon
so has part: feature:654317-654393:1:exon
so has part: feature:654799-654913:1:exon
so has part: feature:656055-656275:1:exon
so has part: feature:656914-656991:1:exon
so has part: feature:657747-657867:1:exon
so has part: feature:658872-658966:1:exon
so has part: feature:659195-659268:1:exon
so has part: feature:659951-660091:1:exon
so has part: feature:660716-660863:1:exon

XP_030820599.1
type: Protein
SIO_000068: ncbiprotein

position:651963:1
position: 651963
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:651963-652046:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:652794-652848:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:654317-654393:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:654799-654913:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:656055-656275:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:656914-656991:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:657747-657867:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:658872-658966:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:659195-659268:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:659951-660091:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:660716-660863:1:exon

SH3BGRL3
type: Gene
subclass of: SO_0000704
RO_0002162: 87175
gene: SH3BGRL3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(662241..664022)
location: region:662241-664022:-1
so has part: feature:662241-664022:-1:exon
subclass of: SO_0000010

115912823
type: Gene
SIO_000068: ncbigene

position:662241:-1
position: 662241
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:664022:-1
position: 664022
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:662241-664022:-1:exon

SH3BGRL3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 87175
gene: SH3BGRL3
product: SH3 domain binding glutamate rich protein like 3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 17 ESTs, 11 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
transcript id: XM_030964576.1
SIO_010081: SH3BGRL3
subclass of: SO_0000673
so part of: SH3BGRL3
location: complement(join(662241..663141,663435..663602,663864..664022))
location: region:662241-664022:-1
so has part: feature:663864-664022:-1:exon
so has part: feature:663435-663602:-1:exon
so has part: feature:662241-663141:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:663864-664022:-1:exon

position:663864:-1
position: 663864
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:663435-663602:-1:exon

position:663435:-1
position: 663435
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:663602:-1
position: 663602
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:662241-663141:-1:exon

position:663141:-1
position: 663141
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

SH3BGRL3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 87175
gene: SH3BGRL3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: SH3 domain-binding glutamic acid-rich-like protein 3
translation: MSTLKVYSTSVTGSREIKSQQSEVTRILDGKNIKYELVDISQDNALREEMRAKAGNPKAIPPQIVNGDQYCGDYELFVEAVEQNTLQEFLKLA
SIO_010081: SH3BGRL3
subclass of: SO_0000673
so part of: SH3BGRL3
location: complement(join(663076..663141,663435..663602,663864..663911))
location: region:663076-663911:-1
so has part: feature:663864-663911:-1:exon
so has part: feature:663435-663602:-1:exon
so has part: feature:663076-663141:-1:exon

XP_030820436.1
type: Protein
SIO_000068: ncbiprotein

position:663076:-1
position: 663076
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:663911:-1
position: 663911
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:663864-663911:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:663435-663602:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:663076-663141:-1:exon

CEP85
type: Gene
subclass of: SO_0000704
RO_0002162: 87175
gene: CEP85
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(664335..675911)
location: region:664335-675911:-1
so has part: feature:664335-675911:-1:exon
subclass of: SO_0000010

115912812
type: Gene
SIO_000068: ncbigene

position:664335:-1
position: 664335
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:675911:-1
position: 675911
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:664335-675911:-1:exon

CEP85
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 87175
gene: CEP85
product: centrosomal protein 85
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 3 ESTs, 14 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_030964554.1
SIO_010081: CEP85
subclass of: SO_0000673
so part of: CEP85
location: complement(join(664335..666482,666767..666995,667473..667580,667666..667716,668139..668259,668476..668630,668721..668873,669210..669395,669672..669789,670575..670708,671354..672036,674002..674145,674678..674749,675856..675911))
location: region:664335-675911:-1
so has part: feature:675856-675911:-1:exon
so has part: feature:674678-674749:-1:exon
so has part: feature:674002-674145:-1:exon
so has part: feature:671354-672036:-1:exon
so has part: feature:670575-670708:-1:exon
so has part: feature:669672-669789:-1:exon
so has part: feature:669210-669395:-1:exon
so has part: feature:668721-668873:-1:exon
so has part: feature:668476-668630:-1:exon
so has part: feature:668139-668259:-1:exon
so has part: feature:667666-667716:-1:exon
so has part: feature:667473-667580:-1:exon
so has part: feature:666767-666995:-1:exon
so has part: feature:664335-666482:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:675856-675911:-1:exon

position:675856:-1
position: 675856
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:674678-674749:-1:exon

position:674678:-1
position: 674678
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:674749:-1
position: 674749
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:674002-674145:-1:exon

position:674002:-1
position: 674002
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:674145:-1
position: 674145
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:671354-672036:-1:exon

position:671354:-1
position: 671354
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:672036:-1
position: 672036
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:670575-670708:-1:exon

position:670575:-1
position: 670575
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:670708:-1
position: 670708
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:669672-669789:-1:exon

position:669672:-1
position: 669672
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:669789:-1
position: 669789
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:669210-669395:-1:exon

position:669210:-1
position: 669210
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:669395:-1
position: 669395
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:668721-668873:-1:exon

position:668721:-1
position: 668721
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:668873:-1
position: 668873
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:668476-668630:-1:exon

position:668476:-1
position: 668476
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:668630:-1
position: 668630
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:668139-668259:-1:exon

position:668139:-1
position: 668139
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:668259:-1
position: 668259
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:667666-667716:-1:exon

position:667666:-1
position: 667666
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:667716:-1
position: 667716
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:667473-667580:-1:exon

position:667473:-1
position: 667473
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:667580:-1
position: 667580
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:666767-666995:-1:exon

position:666767:-1
position: 666767
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:666995:-1
position: 666995
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:664335-666482:-1:exon

position:666482:-1
position: 666482
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

CEP85
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 87175
gene: CEP85
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: centrosomal protein of 85 kDa
translation: MAAPEKDPDLRLLQKNPLDPSSCQKSQFLESEWKAAMVSLRSLSRCPSEAESRDGGIGTSCSDSTEDFCNSSSGSSFHPIKTQVTIPTAHVMPSTLGASPSKLCPAGDQGSAQPAGPGLTRNGDLNAGKSSQVPPRELLRLCRASGDGGCEHAWPPAAAERARTEGAWKFDTPAIEQTLNQSLLLDSLCTDPLHRCQQFNAGSEGGKDHYKVLPESKQAPNGACEPRDGPWPSGSRMMPAGLQANSFYSKPVAAPPGRAWVQEGCALHPHQGVCELSAWKQQLDKVRLQVEQMQLQNGGTCPHSSLYSPSLPAPDPAQWINILNSNENLLKEKELLIDRQRQHISQLEQKVRESELQVHSALLGCPASYGDIYMLRMQELQRENTFLRAQFTEKTESLSKENIELERKLAAAELDVKLVRESLKETVQKHAEELKKQEERVKGRDKHINNLKKKCQKESEQNRERQQRIETLERYLADLPTLEDHQKQSQKLKESELKTTALQETVLALETELGDVQAAFREQELQLETQKHKERELLSTVHSLQDKLQQYAKNAERGPPAQDGERQKMEHDSLKKECDCLRKIVDKKQKKMEQLSLQVKNLEEQVAQEEGTSQALKEEAMRRENALQQLRAAVKELSVQNQELIEKNLTLQEQLRQAQLTAQPLPADTARLAQELHGELASCLQDLQSVYSIVTQRAQGKDPNLSLLLGIHSVQYPVKEKDDLLSPDGLAKKLVEVKQLHKEVEDLRTAISDRYAQDMGDNCITQ
SIO_010081: CEP85
subclass of: SO_0000673
so part of: CEP85
location: complement(join(666319..666482,666767..666995,667473..667580,667666..667716,668139..668259,668476..668630,668721..668873,669210..669395,669672..669789,670575..670708,671354..672036,674002..674145,674678..674732))
location: region:666319-674732:-1
so has part: feature:674678-674732:-1:exon
so has part: feature:674002-674145:-1:exon
so has part: feature:671354-672036:-1:exon
so has part: feature:670575-670708:-1:exon
so has part: feature:669672-669789:-1:exon
so has part: feature:669210-669395:-1:exon
so has part: feature:668721-668873:-1:exon
so has part: feature:668476-668630:-1:exon
so has part: feature:668139-668259:-1:exon
so has part: feature:667666-667716:-1:exon
so has part: feature:667473-667580:-1:exon
so has part: feature:666767-666995:-1:exon
so has part: feature:666319-666482:-1:exon

XP_030820414.1
type: Protein
SIO_000068: ncbiprotein

position:666319:-1
position: 666319
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:674732:-1
position: 674732
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:674678-674732:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:674002-674145:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:671354-672036:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:670575-670708:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:669672-669789:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:669210-669395:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:668721-668873:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:668476-668630:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:668139-668259:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:667666-667716:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:667473-667580:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:666767-666995:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:666319-666482:-1:exon

CNKSR1
type: Gene
subclass of: SO_0000704
RO_0002162: 87175
gene: CNKSR1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(676745..683459)
location: region:676745-683459:-1
so has part: feature:676745-683459:-1:exon
subclass of: SO_0000010

115912894
type: Gene
SIO_000068: ncbigene

position:676745:-1
position: 676745
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:683459:-1
position: 683459
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:676745-683459:-1:exon

CNKSR1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 87175
gene: CNKSR1
product: connector enhancer of kinase suppressor of Ras 1
exception: unclassified transcription discrepancy
note: The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: inserted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 67% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_030964683.1
SIO_010081: CNKSR1
subclass of: SO_0000673
so part of: CNKSR1
location: complement(join(676745..676936,677018..677199,677936..678026,678104..678168,678338..678411,678495..678566,678976..679049,679139..679311,679445..679475,679633..679763,679842..679975,680706..680791,680943..681367,681696..681755,681829..682077,682154..682195,682333..682417,682490..682680,682919..683076,683361..683459))
location: region:676745-683459:-1
so has part: feature:683361-683459:-1:exon
so has part: feature:682919-683076:-1:exon
so has part: feature:682490-682680:-1:exon
so has part: feature:682333-682417:-1:exon
so has part: feature:682154-682195:-1:exon
so has part: feature:681829-682077:-1:exon
so has part: feature:681696-681755:-1:exon
so has part: feature:680943-681367:-1:exon
so has part: feature:680706-680791:-1:exon
so has part: feature:679842-679975:-1:exon
so has part: feature:679633-679763:-1:exon
so has part: feature:679445-679475:-1:exon
so has part: feature:679139-679311:-1:exon
so has part: feature:678976-679049:-1:exon
so has part: feature:678495-678566:-1:exon
so has part: feature:678338-678411:-1:exon
so has part: feature:678104-678168:-1:exon
so has part: feature:677936-678026:-1:exon
so has part: feature:677018-677199:-1:exon
so has part: feature:676745-676936:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:683361-683459:-1:exon

position:683361:-1
position: 683361
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:682919-683076:-1:exon

position:682919:-1
position: 682919
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:683076:-1
position: 683076
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:682490-682680:-1:exon

position:682490:-1
position: 682490
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:682680:-1
position: 682680
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:682333-682417:-1:exon

position:682333:-1
position: 682333
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:682417:-1
position: 682417
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:682154-682195:-1:exon

position:682154:-1
position: 682154
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:682195:-1
position: 682195
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:681829-682077:-1:exon

position:681829:-1
position: 681829
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:682077:-1
position: 682077
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:681696-681755:-1:exon

position:681696:-1
position: 681696
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:681755:-1
position: 681755
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:680943-681367:-1:exon

position:680943:-1
position: 680943
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:681367:-1
position: 681367
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:680706-680791:-1:exon

position:680706:-1
position: 680706
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:680791:-1
position: 680791
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:679842-679975:-1:exon

position:679842:-1
position: 679842
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:679975:-1
position: 679975
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:679633-679763:-1:exon

position:679633:-1
position: 679633
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:679763:-1
position: 679763
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:679445-679475:-1:exon

position:679445:-1
position: 679445
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:679475:-1
position: 679475
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:679139-679311:-1:exon

position:679139:-1
position: 679139
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:679311:-1
position: 679311
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:678976-679049:-1:exon

position:678976:-1
position: 678976
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:679049:-1
position: 679049
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:678495-678566:-1:exon

position:678495:-1
position: 678495
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:678566:-1
position: 678566
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:678338-678411:-1:exon

position:678338:-1
position: 678338
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:678411:-1
position: 678411
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:678104-678168:-1:exon

position:678104:-1
position: 678104
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:678168:-1
position: 678168
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:677936-678026:-1:exon

position:677936:-1
position: 677936
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:678026:-1
position: 678026
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:677018-677199:-1:exon

position:677018:-1
position: 677018
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:677199:-1
position: 677199
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:676745-676936:-1:exon

position:676936:-1
position: 676936
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

CNKSR1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 87175
gene: CNKSR1
exception: unclassified translation discrepancy
note: The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: inserted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: LOW QUALITY PROTEIN: connector enhancer of kinase suppressor of ras 1
translation: MEPVRCWGPAQPAAWLRGLDAAVQGYPFEAWGLSGPDLLGLEPGGLEALGVWPVGHQELLLEAVEQLRNLDTRLASTSLRTLTERLQELAQGIQSLVQGGLPAGDAPQPPSLTLLARVIDLVGAAKELFSWLNRYLFSTLNDFSASRDIIVLCAQLAETLQADLPAAQRSSGILQICQHIEGICESIVGCSPPALLERRAVLQSVGLALLPGPQGSPPTSPSTPTLPLGPWQSPPASPEPPAAPCDVLGSPQALLTARLGFEITSTSSCLHLVSATSPEALAAHGGHILPGDEIVQVNEQVVVSGGQXAPGWEDTDRAGSGGGCRSYEQQKAGAMAAEALGDTGAIARRMWGMWDLWLGWVWGIKHPWSRGSGPQLTQHLQVGWTPVSLARKLLEKGNRVTLVLKKIPLDLPGPPPSPRQQPPGAFLDAADSPGTRSGESPGSPVSLTSSVAADLDSGAESVPDPVTDEEQEEAEREPRLPGAAVEELPGPAGQGAAEELWDSGSALGTPPSSPAAPEPRGTELSPRAAGAAEPSPAEGSPSTGRRPKGVATRLSRRRVSCRDLGRADCDGWLLKKKEHVGFMAQKWKRCWVVLKGHTLYWYNHPNDERAAGLINVATYNLESTREQKKKYVFQLCHQTYKPFVFAAETLADLSMWVSRLVTAKTKHTLAQQAVPDKEEDCYSETEAEDPDDETPRHGSDPARKRLQNSPEKAQLSPGSSPQGSPRPCSPLEPGAEELERLARCLRQGGLSLTGQRRLQTREQGRKSFLRRNRNPHINERVHAVRALQSTLKAKLAELQALEQLLGDAALTSATFRRWKEEHQELYQELREGWAGQQRQGGAGEQRGPQGEAAEP
SIO_010081: CNKSR1
subclass of: SO_0000673
so part of: CNKSR1
location: complement(join(676745..676936,677018..677199,677936..678026,678104..678168,678338..678411,678495..678566,678976..679049,679139..679311,679445..679475,679633..679763,679842..679975,680706..680791,680943..681367,681696..681755,681829..682077,682154..682195,682333..682417,682490..682680,682919..683076,683361..683412))
location: region:676745-683412:-1
so has part: feature:683361-683412:-1:exon
so has part: feature:682919-683076:-1:exon
so has part: feature:682490-682680:-1:exon
so has part: feature:682333-682417:-1:exon
so has part: feature:682154-682195:-1:exon
so has part: feature:681829-682077:-1:exon
so has part: feature:681696-681755:-1:exon
so has part: feature:680943-681367:-1:exon
so has part: feature:680706-680791:-1:exon
so has part: feature:679842-679975:-1:exon
so has part: feature:679633-679763:-1:exon
so has part: feature:679445-679475:-1:exon
so has part: feature:679139-679311:-1:exon
so has part: feature:678976-679049:-1:exon
so has part: feature:678495-678566:-1:exon
so has part: feature:678338-678411:-1:exon
so has part: feature:678104-678168:-1:exon
so has part: feature:677936-678026:-1:exon
so has part: feature:677018-677199:-1:exon
so has part: feature:676745-676936:-1:exon

XP_030820543.1
type: Protein
SIO_000068: ncbiprotein

position:683412:-1
position: 683412
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:683361-683412:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:682919-683076:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:682490-682680:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:682333-682417:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:682154-682195:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:681829-682077:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:681696-681755:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:680943-681367:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:680706-680791:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:679842-679975:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:679633-679763:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:679445-679475:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:679139-679311:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:678976-679049:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:678495-678566:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:678338-678411:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:678104-678168:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:677936-678026:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:677018-677199:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:676745-676936:-1:exon

ZNF593
type: Gene
subclass of: SO_0000704
RO_0002162: 87175
gene: ZNF593
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(686032..687489)
location: region:686032-687489:-1
so has part: feature:686032-687489:-1:exon
subclass of: SO_0000010

115912840
type: Gene
SIO_000068: ncbigene

position:686032:-1
position: 686032
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:687489:-1
position: 687489
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:686032-687489:-1:exon

ZNF593
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 87175
gene: ZNF593
product: zinc finger protein 593
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 mRNAs, 15 ESTs, 6 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
transcript id: XM_030964600.1
SIO_010081: ZNF593
subclass of: SO_0000673
so part of: ZNF593
location: complement(join(686032..686496,686588..686650,687270..687489))
location: region:686032-687489:-1
so has part: feature:687270-687489:-1:exon
so has part: feature:686588-686650:-1:exon
so has part: feature:686032-686496:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:687270-687489:-1:exon

position:687270:-1
position: 687270
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:686588-686650:-1:exon

position:686588:-1
position: 686588
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:686650:-1
position: 686650
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:686032-686496:-1:exon

position:686496:-1
position: 686496
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

ZNF593
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 87175
gene: ZNF593
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: zinc finger protein 593
translation: MSPRNGRRTGAHRAHSLARQLKTKRRRRDLDEIHADLKPENAARLLRQEIDPDLPGCAQFYCLHCARYFVDLNSMKEHFRSKVHKKRLKQLREAPYTQEEAERAAGMGSYVPPKKVEVQTQPLEEVTEMETSG
SIO_010081: ZNF593
subclass of: SO_0000673
so part of: ZNF593
location: complement(join(686355..686496,686588..686650,687270..687466))
location: region:686355-687466:-1
so has part: feature:687270-687466:-1:exon
so has part: feature:686588-686650:-1:exon
so has part: feature:686355-686496:-1:exon

XP_030820460.1
type: Protein
SIO_000068: ncbiprotein

position:686355:-1
position: 686355
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:687466:-1
position: 687466
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:687270-687466:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:686588-686650:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:686355-686496:-1:exon

C23H1orf232
type: Gene
subclass of: SO_0000704
RO_0002162: 87175
gene: C23H1orf232
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 688010..689017
location: region:688010-689017:1
so has part: feature:688010-689017:1:exon
subclass of: SO_0000010

115912919
type: Gene
SIO_000068: ncbigene

position:688010:1
position: 688010
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:689017:1
position: 689017
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:688010-689017:1:exon

C23H1orf232
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 87175
gene: C23H1orf232
product: chromosome 23 C1orf232 homolog
exception: unclassified transcription discrepancy
note: The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: deleted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 81% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_030964718.1
SIO_010081: C23H1orf232
subclass of: SO_0000673
so part of: C23H1orf232
location: join(688010..688209,688299..688385,688465..688562,688762..689017)
location: region:688010-689017:1
so has part: feature:688010-688209:1:exon
so has part: feature:688299-688385:1:exon
so has part: feature:688465-688562:1:exon
so has part: feature:688762-689017:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:688010-688209:1:exon

position:688209:1
position: 688209
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:688299-688385:1:exon

position:688299:1
position: 688299
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:688385:1
position: 688385
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:688465-688562:1:exon

position:688465:1
position: 688465
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:688562:1
position: 688562
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:688762-689017:1:exon

position:688762:1
position: 688762
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

C23H1orf232
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 87175
gene: C23H1orf232
exception: unclassified translation discrepancy
note: The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: deleted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: LOW QUALITY PROTEIN: uncharacterized protein C1orf232 homolog
translation: MAQGFWRLYKAKVLQTLGAARPDGALQDEGEPPELMETAEPPALLEEGASPVSQLARKVQGVGARGWRTLSSLFTREDEHQLLSAEPCPDHPLAEPPEVPHAEKAPGFWDLFATKWQQAAGPDKAGPPPEPDESPGEPPGDDGSDLREPEEGAFHWGFLAGKLAEIRNKNAPKGN
SIO_010081: C23H1orf232
subclass of: SO_0000673
so part of: C23H1orf232
location: join(688122..688209,688299..688385,688465..688562,688762..689017)
location: region:688122-689017:1
so has part: feature:688122-688209:1:exon
so has part: feature:688299-688385:1:exon
so has part: feature:688465-688562:1:exon
so has part: feature:688762-689017:1:exon

XP_030820578.1
type: Protein
SIO_000068: ncbiprotein

position:688122:1
position: 688122
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:688122-688209:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:688299-688385:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:688465-688562:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:688762-689017:1:exon

FAM110D
type: Gene
subclass of: SO_0000704
RO_0002162: 87175
gene: FAM110D
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(689632..690742)
location: region:689632-690742:-1
so has part: feature:689632-690742:-1:exon
subclass of: SO_0000010

115912884
type: Gene
SIO_000068: ncbigene

position:689632:-1
position: 689632
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:690742:-1
position: 690742
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:689632-690742:-1:exon

FAM110D
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 87175
gene: FAM110D
product: family with sequence similarity 110 member D
exception: unclassified transcription discrepancy
note: The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: inserted 2 bases in 2 codons; deleted 6 bases in 3 codons; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins, and 89% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_030964671.1
SIO_010081: FAM110D
subclass of: SO_0000673
so part of: FAM110D
location: complement(689632..690742)
location: region:689632-690742:-1
so has part: feature:689632-690742:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:689632-690742:-1:exon

FAM110D
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 87175
gene: FAM110D
exception: unclassified translation discrepancy
note: The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: inserted 2 bases in 2 codons; deleted 6 bases in 3 codons; Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: LOW QUALITY PROTEIN: protein FAM110D
translation: MVPLGSPTLAVCASSNLRLMAPGRGSPLAWLNRGPECPGGSGGRRASAVERLEADKAKYVKSQQVISRRQEPALRGSPSASPRGRRRLARQQCGELXPELPCPQSPVSRRSGSRRLLRPDSLIIYRQKRDCLGGDKENAKGSGLVRRLFQGPLRATPPSSPPARRSPRAPETPMLWAPAEKEETRTAGGDSSGDSGGDSGGILPAPAEQPPGAPGKEPLALRVSLPLSEQERFFNYCGLDRALVELLGRRRFGPAGWDSGFGRAGSXESEPGRASGAARGRGPGEEEPDARAGSAVSVVERNARVIKWLYGCQRAWAAAKESTV
SIO_010081: FAM110D
subclass of: SO_0000673
so part of: FAM110D
location: complement(689734..690712)
location: region:689734-690712:-1
so has part: feature:689734-690712:-1:exon

XP_030820531.1
type: Protein
SIO_000068: ncbiprotein

position:689734:-1
position: 689734
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:690712:-1
position: 690712
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:689734-690712:-1:exon

PDIK1L
type: Gene
subclass of: SO_0000704
RO_0002162: 87175
gene: PDIK1L
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(694572..702379)
location: region:694572-702379:-1
so has part: feature:694572-702379:-1:exon
subclass of: SO_0000010

115912926
type: Gene
SIO_000068: ncbigene

position:694572:-1
position: 694572
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:702379:-1
position: 702379
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:694572-702379:-1:exon

PDIK1L
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 87175
gene: PDIK1L
product: PDLIM1 interacting kinase 1 like, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 7 ESTs, 21 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_030964733.1
SIO_010081: PDIK1L
subclass of: SO_0000673
so part of: PDIK1L
location: complement(join(694572..697579,700156..700457,702321..702379))
location: region:694572-702379:-1
so has part: feature:702321-702379:-1:exon
so has part: feature:700156-700457:-1:exon
so has part: feature:694572-697579:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:702321-702379:-1:exon

position:702321:-1
position: 702321
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:700156-700457:-1:exon

position:700156:-1
position: 700156
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:700457:-1
position: 700457
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:694572-697579:-1:exon

position:697579:-1
position: 697579
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

PDIK1L
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 87175
gene: PDIK1L
product: PDLIM1 interacting kinase 1 like, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 7 ESTs, 21 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_030964731.1
SIO_010081: PDIK1L
subclass of: SO_0000673
so part of: PDIK1L
location: complement(join(694572..697579,700156..701505,702321..702360))
location: region:694572-702360:-1
so has part: feature:702321-702360:-1:exon
so has part: feature:700156-701505:-1:exon
so has part: feature:694572-697579:-1:exon

position:702360:-1
position: 702360
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:702321-702360:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:700156-701505:-1:exon

position:701505:-1
position: 701505
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:694572-697579:-1:exon

PDIK1L
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 87175
gene: PDIK1L
product: PDLIM1 interacting kinase 1 like, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 ESTs, 21 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_030964732.1
SIO_010081: PDIK1L
subclass of: SO_0000673
so part of: PDIK1L
location: complement(join(694572..697579,700156..700457,700693..702038))
location: region:694572-702038:-1
so has part: feature:700693-702038:-1:exon
so has part: feature:700156-700457:-1:exon
so has part: feature:694572-697579:-1:exon

position:702038:-1
position: 702038
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:700693-702038:-1:exon

position:700693:-1
position: 700693
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:700156-700457:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:694572-697579:-1:exon

PDIK1L
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 87175
gene: PDIK1L
product: PDLIM1 interacting kinase 1 like, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 7 ESTs, 22 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
transcript id: XM_030964730.1
SIO_010081: PDIK1L
subclass of: SO_0000673
so part of: PDIK1L
location: complement(join(694572..697579,700156..702037))
location: region:694572-702037:-1
so has part: feature:700156-702037:-1:exon
so has part: feature:694572-697579:-1:exon

position:702037:-1
position: 702037
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:700156-702037:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:694572-697579:-1:exon

PDIK1L
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 87175
gene: PDIK1L
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: serine/threonine-protein kinase PDIK1L
translation: MVSSQPKYDLIREVGRGSYGVVYEALVRRTCARVAVKKIRCHAPENVELALREFWALSSIKSQHPNVIHLEECILQKDGMVQKMAHGSSSSLYLQLVETSLKGEIAFDPKSAYYLWFVMDFCDGGDMNEYLLSRKPNRKTNTSFMLQLSSALAFLHKNQIIHRDLKPDNILISQGRAPAEPTLKVADFGLSKVCSASGHNPEEPVNVNKCFLSTACGTDFYMAPEVWEGHYTAKADIFALGIIIWAMLERITFVDTETKKELLGSYVRQGTAIVPVGEALLENPKMELLIPVKKKSMNARMKQLIKEMLAANPQDRPDAFELELRLVNIAFKDSSWDT
SIO_010081: PDIK1L
subclass of: SO_0000673
so part of: PDIK1L
location: complement(join(696848..697579,700156..700440))
location: region:696848-700440:-1
so has part: feature:700156-700440:-1:exon
so has part: feature:696848-697579:-1:exon

XP_030820590.1
type: Protein
SIO_000068: ncbiprotein

position:696848:-1
position: 696848
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:700440:-1
position: 700440
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:700156-700440:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:696848-697579:-1:exon

PDIK1L
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 87175
gene: PDIK1L
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: serine/threonine-protein kinase PDIK1L
translation: MVSSQPKYDLIREVGRGSYGVVYEALVRRTCARVAVKKIRCHAPENVELALREFWALSSIKSQHPNVIHLEECILQKDGMVQKMAHGSSSSLYLQLVETSLKGEIAFDPKSAYYLWFVMDFCDGGDMNEYLLSRKPNRKTNTSFMLQLSSALAFLHKNQIIHRDLKPDNILISQGRAPAEPTLKVADFGLSKVCSASGHNPEEPVNVNKCFLSTACGTDFYMAPEVWEGHYTAKADIFALGIIIWAMLERITFVDTETKKELLGSYVRQGTAIVPVGEALLENPKMELLIPVKKKSMNARMKQLIKEMLAANPQDRPDAFELELRLVNIAFKDSSWDT
SIO_010081: PDIK1L
subclass of: SO_0000673
so part of: PDIK1L
location: complement(join(696848..697579,700156..700440))
location: region:696848-700440:-1
so has part: feature:700156-700440:-1:exon
so has part: feature:696848-697579:-1:exon

XP_030820591.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:700156-700440:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:696848-697579:-1:exon

PDIK1L
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 87175
gene: PDIK1L
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: serine/threonine-protein kinase PDIK1L
translation: MVSSQPKYDLIREVGRGSYGVVYEALVRRTCARVAVKKIRCHAPENVELALREFWALSSIKSQHPNVIHLEECILQKDGMVQKMAHGSSSSLYLQLVETSLKGEIAFDPKSAYYLWFVMDFCDGGDMNEYLLSRKPNRKTNTSFMLQLSSALAFLHKNQIIHRDLKPDNILISQGRAPAEPTLKVADFGLSKVCSASGHNPEEPVNVNKCFLSTACGTDFYMAPEVWEGHYTAKADIFALGIIIWAMLERITFVDTETKKELLGSYVRQGTAIVPVGEALLENPKMELLIPVKKKSMNARMKQLIKEMLAANPQDRPDAFELELRLVNIAFKDSSWDT
SIO_010081: PDIK1L
subclass of: SO_0000673
so part of: PDIK1L
location: complement(join(696848..697579,700156..700440))
location: region:696848-700440:-1
so has part: feature:700156-700440:-1:exon
so has part: feature:696848-697579:-1:exon

XP_030820592.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:700156-700440:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:696848-697579:-1:exon

PDIK1L
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 87175
gene: PDIK1L
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: serine/threonine-protein kinase PDIK1L
translation: MVSSQPKYDLIREVGRGSYGVVYEALVRRTCARVAVKKIRCHAPENVELALREFWALSSIKSQHPNVIHLEECILQKDGMVQKMAHGSSSSLYLQLVETSLKGEIAFDPKSAYYLWFVMDFCDGGDMNEYLLSRKPNRKTNTSFMLQLSSALAFLHKNQIIHRDLKPDNILISQGRAPAEPTLKVADFGLSKVCSASGHNPEEPVNVNKCFLSTACGTDFYMAPEVWEGHYTAKADIFALGIIIWAMLERITFVDTETKKELLGSYVRQGTAIVPVGEALLENPKMELLIPVKKKSMNARMKQLIKEMLAANPQDRPDAFELELRLVNIAFKDSSWDT
SIO_010081: PDIK1L
subclass of: SO_0000673
so part of: PDIK1L
location: complement(join(696848..697579,700156..700440))
location: region:696848-700440:-1
so has part: feature:700156-700440:-1:exon
so has part: feature:696848-697579:-1:exon

XP_030820593.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:700156-700440:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:696848-697579:-1:exon

TRIM63
type: Gene
subclass of: SO_0000704
RO_0002162: 87175
gene: TRIM63
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 704701..708042
location: region:704701-708042:1
so has part: feature:704701-708042:1:exon
subclass of: SO_0000010

115912843
type: Gene
SIO_000068: ncbigene

position:704701:1
position: 704701
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:708042:1
position: 708042
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:704701-708042:1:exon

TRIM63
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 87175
gene: TRIM63
product: tripartite motif containing 63, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 mRNAs, 5 ESTs, 15 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_030964604.1
SIO_010081: TRIM63
subclass of: SO_0000673
so part of: TRIM63
location: join(704701..704875,704966..705132,706237..706405,706664..706759,706889..707122,707254..707276,707430..707554,707656..707736,707846..708042)
location: region:704701-708042:1
so has part: feature:704701-704875:1:exon
so has part: feature:704966-705132:1:exon
so has part: feature:706237-706405:1:exon
so has part: feature:706664-706759:1:exon
so has part: feature:706889-707122:1:exon
so has part: feature:707254-707276:1:exon
so has part: feature:707430-707554:1:exon
so has part: feature:707656-707736:1:exon
so has part: feature:707846-708042:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:704701-704875:1:exon

position:704875:1
position: 704875
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:704966-705132:1:exon

position:704966:1
position: 704966
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:705132:1
position: 705132
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:706237-706405:1:exon

position:706237:1
position: 706237
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:706405:1
position: 706405
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:706664-706759:1:exon

position:706664:1
position: 706664
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:706759:1
position: 706759
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:706889-707122:1:exon

position:706889:1
position: 706889
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:707122:1
position: 707122
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:707254-707276:1:exon

position:707254:1
position: 707254
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:707276:1
position: 707276
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:707430-707554:1:exon

position:707430:1
position: 707430
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:707554:1
position: 707554
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:707656-707736:1:exon

position:707656:1
position: 707656
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:707736:1
position: 707736
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:707846-708042:1:exon

position:707846:1
position: 707846
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

TRIM63
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 87175
gene: TRIM63
product: tripartite motif containing 63, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 mRNAs, 5 ESTs, 9 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_030964606.1
SIO_010081: TRIM63
subclass of: SO_0000673
so part of: TRIM63
location: join(704701..704875,704966..705132,706237..706405,706664..706759,706889..707122,707254..707276,707430..707554,707659..707736,707846..708042)
location: region:704701-708042:1
so has part: feature:704701-704875:1:exon
so has part: feature:704966-705132:1:exon
so has part: feature:706237-706405:1:exon
so has part: feature:706664-706759:1:exon
so has part: feature:706889-707122:1:exon
so has part: feature:707254-707276:1:exon
so has part: feature:707430-707554:1:exon
so has part: feature:707659-707736:1:exon
so has part: feature:707846-708042:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:704701-704875:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:704966-705132:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:706237-706405:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:706664-706759:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:706889-707122:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:707254-707276:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:707430-707554:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:707659-707736:1:exon

position:707659:1
position: 707659
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:707846-708042:1:exon

TRIM63
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 87175
gene: TRIM63
product: tripartite motif containing 63, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 10 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_030964605.1
SIO_010081: TRIM63
subclass of: SO_0000673
so part of: TRIM63
location: join(704701..704875,704966..705132,706240..706405,706664..706759,706889..707122,707254..707276,707430..707554,707656..707736,707846..708042)
location: region:704701-708042:1
so has part: feature:704701-704875:1:exon
so has part: feature:704966-705132:1:exon
so has part: feature:706240-706405:1:exon
so has part: feature:706664-706759:1:exon
so has part: feature:706889-707122:1:exon
so has part: feature:707254-707276:1:exon
so has part: feature:707430-707554:1:exon
so has part: feature:707656-707736:1:exon
so has part: feature:707846-708042:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:704701-704875:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:704966-705132:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:706240-706405:1:exon

position:706240:1
position: 706240
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:706664-706759:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:706889-707122:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:707254-707276:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:707430-707554:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:707656-707736:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:707846-708042:1:exon

TRIM63
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 87175
gene: TRIM63
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: E3 ubiquitin-protein ligase TRIM63 isoform X1
translation: MDFQAGILQDGSPMESLEKQLICPICLEMFSKPVVILPCQHNLCRKCANDVFQAANPYWQSRGSLISGGRFRCPSCRHEVLLDRHGVYGLQRNLLVENIIDIYKQECSSRPLKKGEHPMCKEHEDERINIYCVTCEVPTCSMCKVFGAHKDCEVAPLQSVFQGQKTELNNCISMLVAGNDRIQTIISQLEDSCQSTEENSEAAKRELCARFDALAALLEEKKAELLQRICREQADKTAFIQSLIRQYKEQLEKSSRLVETAIQAAEETGGAAFLMNAKQLIKTIVEASKGARLDKIEPGYESMDAFSVSLEHLTEAVHALDFEPAEEDEEYFDGEEEEEVEENAAPERTAMASL
SIO_010081: TRIM63
subclass of: SO_0000673
so part of: TRIM63
location: join(704717..704875,704966..705132,706237..706405,706664..706759,706889..707122,707254..707276,707430..707554,707656..707736,707846..707856)
location: region:704717-707856:1
so has part: feature:704717-704875:1:exon
so has part: feature:704966-705132:1:exon
so has part: feature:706237-706405:1:exon
so has part: feature:706664-706759:1:exon
so has part: feature:706889-707122:1:exon
so has part: feature:707254-707276:1:exon
so has part: feature:707430-707554:1:exon
so has part: feature:707656-707736:1:exon
so has part: feature:707846-707856:1:exon

XP_030820464.1
type: Protein
SIO_000068: ncbiprotein

position:704717:1
position: 704717
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:707856:1
position: 707856
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:704717-704875:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:704966-705132:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:706237-706405:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:706664-706759:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:706889-707122:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:707254-707276:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:707430-707554:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:707656-707736:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:707846-707856:1:exon

TRIM63
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 87175
gene: TRIM63
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: E3 ubiquitin-protein ligase TRIM63 isoform X3
translation: MDFQAGILQDGSPMESLEKQLICPICLEMFSKPVVILPCQHNLCRKCANDVFQAANPYWQSRGSLISGGRFRCPSCRHEVLLDRHGVYGLQRNLLVENIIDIYKQECSSRPLKKGEHPMCKEHEDERINIYCVTCEVPTCSMCKVFGAHKDCEVAPLQSVFQGQKTELNNCISMLVAGNDRIQTIISQLEDSCQSTEENSEAAKRELCARFDALAALLEEKKAELLQRICREQADKTAFIQSLIRQYKEQLEKSSRLVETAIQAAEETGGAAFLMNAKQLIKTIVEASKGARLDKIEPGYESMDAFSVSLEHLTEAVHALDFEPEEDEEYFDGEEEEEVEENAAPERTAMASL
SIO_010081: TRIM63
subclass of: SO_0000673
so part of: TRIM63
location: join(704717..704875,704966..705132,706237..706405,706664..706759,706889..707122,707254..707276,707430..707554,707659..707736,707846..707856)
location: region:704717-707856:1
so has part: feature:704717-704875:1:exon
so has part: feature:704966-705132:1:exon
so has part: feature:706237-706405:1:exon
so has part: feature:706664-706759:1:exon
so has part: feature:706889-707122:1:exon
so has part: feature:707254-707276:1:exon
so has part: feature:707430-707554:1:exon
so has part: feature:707659-707736:1:exon
so has part: feature:707846-707856:1:exon

XP_030820466.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:704717-704875:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:704966-705132:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:706237-706405:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:706664-706759:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:706889-707122:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:707254-707276:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:707430-707554:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:707659-707736:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:707846-707856:1:exon

TRIM63
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 87175
gene: TRIM63
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: E3 ubiquitin-protein ligase TRIM63 isoform X2
translation: MDFQAGILQDGSPMESLEKQLICPICLEMFSKPVVILPCQHNLCRKCANDVFQAANPYWQSRGSLISGGRFRCPSCRHEVLLDRHGVYGLQRNLLVENIIDIYKQECSRPLKKGEHPMCKEHEDERINIYCVTCEVPTCSMCKVFGAHKDCEVAPLQSVFQGQKTELNNCISMLVAGNDRIQTIISQLEDSCQSTEENSEAAKRELCARFDALAALLEEKKAELLQRICREQADKTAFIQSLIRQYKEQLEKSSRLVETAIQAAEETGGAAFLMNAKQLIKTIVEASKGARLDKIEPGYESMDAFSVSLEHLTEAVHALDFEPAEEDEEYFDGEEEEEVEENAAPERTAMASL
SIO_010081: TRIM63
subclass of: SO_0000673
so part of: TRIM63
location: join(704717..704875,704966..705132,706240..706405,706664..706759,706889..707122,707254..707276,707430..707554,707656..707736,707846..707856)
location: region:704717-707856:1
so has part: feature:704717-704875:1:exon
so has part: feature:704966-705132:1:exon
so has part: feature:706240-706405:1:exon
so has part: feature:706664-706759:1:exon
so has part: feature:706889-707122:1:exon
so has part: feature:707254-707276:1:exon
so has part: feature:707430-707554:1:exon
so has part: feature:707656-707736:1:exon
so has part: feature:707846-707856:1:exon

XP_030820465.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:704717-704875:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:704966-705132:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:706240-706405:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:706664-706759:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:706889-707122:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:707254-707276:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:707430-707554:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:707656-707736:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:707846-707856:1:exon

SLC30A2
type: Gene
subclass of: SO_0000704
RO_0002162: 87175
gene: SLC30A2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 709070..711435
location: region:709070-711435:1
so has part: feature:709070-711435:1:exon
subclass of: SO_0000010

115912881
type: Gene
SIO_000068: ncbigene

position:709070:1
position: 709070
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:711435:1
position: 711435
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:709070-711435:1:exon

SLC30A2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 87175
gene: SLC30A2
product: solute carrier family 30 member 2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 23 Proteins
transcript id: XM_030964667.1
SIO_010081: SLC30A2
subclass of: SO_0000673
so part of: SLC30A2
location: join(709070..709119,709247..709446,709644..709790,710218..710371,710463..710619,710815..710920,711005..711139,711290..711435)
location: region:709070-711435:1
so has part: feature:709070-709119:1:exon
so has part: feature:709247-709446:1:exon
so has part: feature:709644-709790:1:exon
so has part: feature:710218-710371:1:exon
so has part: feature:710463-710619:1:exon
so has part: feature:710815-710920:1:exon
so has part: feature:711005-711139:1:exon
so has part: feature:711290-711435:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:709070-709119:1:exon

position:709119:1
position: 709119
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:709247-709446:1:exon

position:709247:1
position: 709247
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:709446:1
position: 709446
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:709644-709790:1:exon

position:709644:1
position: 709644
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:709790:1
position: 709790
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:710218-710371:1:exon

position:710218:1
position: 710218
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:710371:1
position: 710371
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:710463-710619:1:exon

position:710463:1
position: 710463
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:710619:1
position: 710619
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:710815-710920:1:exon

position:710815:1
position: 710815
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:710920:1
position: 710920
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:711005-711139:1:exon

position:711005:1
position: 711005
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:711139:1
position: 711139
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:711290-711435:1:exon

position:711290:1
position: 711290
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

SLC30A2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 87175
gene: SLC30A2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: zinc transporter 2
translation: MAAGDEKRHLLSEGSGGCYVGAARKDGQSAAHGQEPALELGTRRGQHCHTRAAGGHPGQQQRARRKLYLAAGICLFFMVGEAVGGYLAHSLVILTDAAHLLTDFASIMISLFALWVSSRPPTKTMNFGWHRAEILGALLSVLSIWVVTGVLVYLGAQRLLSGDYDIEGGAMLITSACAVAVNIVMGLALHQTGHGHSHGPGGEQPNASVRAAFVHVLGDLLQSLGVLIASYIIFFKPEYKYVDPICTFLFSALVLGTTLTILRDVLLVLMEGTPKGMDFNAVRDTLLAVRGVEAVHSLHIWALTAAQPLLSVHIAINAAASAQEVLEEASSRLQGAFRFHSTTIQVESYSEEMRDCRECQPPRD
SIO_010081: SLC30A2
subclass of: SO_0000673
so part of: SLC30A2
location: join(709070..709119,709247..709446,709644..709790,710218..710371,710463..710619,710815..710920,711005..711139,711290..711435)
location: region:709070-711435:1
so has part: feature:709070-709119:1:exon
so has part: feature:709247-709446:1:exon
so has part: feature:709644-709790:1:exon
so has part: feature:710218-710371:1:exon
so has part: feature:710463-710619:1:exon
so has part: feature:710815-710920:1:exon
so has part: feature:711005-711139:1:exon
so has part: feature:711290-711435:1:exon

XP_030820527.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:709070-709119:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:709247-709446:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:709644-709790:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:710218-710371:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:710463-710619:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:710815-710920:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:711005-711139:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:711290-711435:1:exon

EXTL1
type: Gene
subclass of: SO_0000704
RO_0002162: 87175
gene: EXTL1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(711923..719005)
location: region:711923-719005:-1
so has part: feature:711923-719005:-1:exon
subclass of: SO_0000010

115912945
type: Gene
SIO_000068: ncbigene

position:711923:-1
position: 711923
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:719005:-1
position: 719005
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:711923-719005:-1:exon

EXTL1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 87175
gene: EXTL1
product: exostosin like glycosyltransferase 1, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_030964758.1
SIO_010081: EXTL1
subclass of: SO_0000673
so part of: EXTL1
location: complement(join(711923..712425,712510..712670,712777..712863,713006..713101,713363..713481,713567..713699,713772..713891,714478..714571,717313..718517,718691..719005))
location: region:711923-719005:-1
so has part: feature:718691-719005:-1:exon
so has part: feature:717313-718517:-1:exon
so has part: feature:714478-714571:-1:exon
so has part: feature:713772-713891:-1:exon
so has part: feature:713567-713699:-1:exon
so has part: feature:713363-713481:-1:exon
so has part: feature:713006-713101:-1:exon
so has part: feature:712777-712863:-1:exon
so has part: feature:712510-712670:-1:exon
so has part: feature:711923-712425:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:718691-719005:-1:exon

position:718691:-1
position: 718691
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:717313-718517:-1:exon

position:717313:-1
position: 717313
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:718517:-1
position: 718517
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:714478-714571:-1:exon

position:714478:-1
position: 714478
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:714571:-1
position: 714571
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:713772-713891:-1:exon

position:713772:-1
position: 713772
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:713891:-1
position: 713891
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:713567-713699:-1:exon

position:713567:-1
position: 713567
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:713699:-1
position: 713699
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:713363-713481:-1:exon

position:713363:-1
position: 713363
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:713481:-1
position: 713481
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:713006-713101:-1:exon

position:713006:-1
position: 713006
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:713101:-1
position: 713101
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:712777-712863:-1:exon

position:712777:-1
position: 712777
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:712863:-1
position: 712863
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:712510-712670:-1:exon

position:712510:-1
position: 712510
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:712670:-1
position: 712670
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:711923-712425:-1:exon

position:712425:-1
position: 712425
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

EXTL1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 87175
gene: EXTL1
product: exostosin like glycosyltransferase 1, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 11 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_030964756.1
SIO_010081: EXTL1
subclass of: SO_0000673
so part of: EXTL1
location: complement(join(711923..712425,712510..712670,712777..712863,713006..713101,713363..713481,713567..713699,713772..713891,714290..714397,714478..714571,717313..718517,718691..719005))
location: region:711923-719005:-1
so has part: feature:718691-719005:-1:exon
so has part: feature:717313-718517:-1:exon
so has part: feature:714478-714571:-1:exon
so has part: feature:714290-714397:-1:exon
so has part: feature:713772-713891:-1:exon
so has part: feature:713567-713699:-1:exon
so has part: feature:713363-713481:-1:exon
so has part: feature:713006-713101:-1:exon
so has part: feature:712777-712863:-1:exon
so has part: feature:712510-712670:-1:exon
so has part: feature:711923-712425:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:718691-719005:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:717313-718517:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:714478-714571:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:714290-714397:-1:exon

position:714290:-1
position: 714290
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:714397:-1
position: 714397
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:713772-713891:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:713567-713699:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:713363-713481:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:713006-713101:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:712777-712863:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:712510-712670:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:711923-712425:-1:exon

EXTL1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 87175
gene: EXTL1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: exostosin-like 1 isoform X2
translation: MQTRKKYIFLTFLASWLLLFFFGGDQLRRFAFFSARKAEARRSWPRWTDQSLLKSFAEPEELQRDGDPPLLSPRERRAAWLSVYRSSRCRMETCFDLSRCERNGFKVFTYPQERGQPVSETYSKILSSIERSRYHTARPEEACLFILSMDTLDRDRLSEHYVRDLEGKIHSSPLWNGGRNHLIFNLYSGTWPSYGGELGFDPGHAILARASSDSRSFRPGFDVSIPLFPREHPQRGGDRGWLHGDSLPPKKKFLLVFKGKRYLTGIGSGTRNALHHIHNGKDIISLTTCKHGKDWEKHKDTRCDKDNVDYERFDYQELLHNSTFCIVPRGRRLGSFRFLEALQIPSAVRCIRPERVLAFQQQTQFLWDAYFSSVDKIVHTTLEIIKDRLSPHRSRSRRLWNALPGGLLVLPDFSTHLGDFPFYYLHHGYSPSKKFTAFIRAVSQAGSLSQPILRLIQAVSGSQYCAQIVVLWSCEKPPPPSGKWPQSSVPLTIIQGRRKLSDRFFPFGAIQTDAVLSLDEDTALSTSEVDFAFSVWLSFPERIVGFPTQSHFWDAERGRWGYTSKWTNELSMVLTAAAFYHRYYHSLFTEYLPAGLRELVDGLAACEDILMNVLVAAVTKLPPIKVTQRKQHKEGVARPAECGQGAAGTPPGPQPAPAGAGGTAGGRRLSQRQDCLNQLANWFGYMPLVSSRLRLDPVLFKDQVSVLRKKYPSLEKP
SIO_010081: EXTL1
subclass of: SO_0000673
so part of: EXTL1
location: complement(join(712017..712425,712510..712670,712777..712863,713006..713101,713363..713481,713567..713699,713772..713891,714478..714571,717313..718247))
location: region:712017-718247:-1
so has part: feature:717313-718247:-1:exon
so has part: feature:714478-714571:-1:exon
so has part: feature:713772-713891:-1:exon
so has part: feature:713567-713699:-1:exon
so has part: feature:713363-713481:-1:exon
so has part: feature:713006-713101:-1:exon
so has part: feature:712777-712863:-1:exon
so has part: feature:712510-712670:-1:exon
so has part: feature:712017-712425:-1:exon

XP_030820618.1
type: Protein
SIO_000068: ncbiprotein

position:712017:-1
position: 712017
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:718247:-1
position: 718247
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:717313-718247:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:714478-714571:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:713772-713891:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:713567-713699:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:713363-713481:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:713006-713101:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:712777-712863:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:712510-712670:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:712017-712425:-1:exon

EXTL1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 87175
gene: EXTL1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: exostosin-like 1 isoform X1
translation: MQTRKKYIFLTFLASWLLLFFFGGDQLRRFAFFSARKAEARRSWPRWTDQSLLKSFAEPEELQRDGDPPLLSPRERRAAWLSVYRSSRCRMETCFDLSRCERNGFKVFTYPQERGQPVSETYSKILSSIERSRYHTARPEEACLFILSMDTLDRDRLSEHYVRDLEGKIHSSPLWNGGRNHLIFNLYSGTWPSYGGELGFDPGHAILARASSDSRSFRPGFDVSIPLFPREHPQRGGDRGWLHGDSLPPKKKFLLVFKGKRYLTGIGSGTRNALHHIHNGKDIISLTTCKHGKDWEKHKDTRCDKDNVDYERFDYQELLHNSTFCIVPRGRRLGSFRFLEALQAACIPVLLSDGWELPFAEAIDWGKAAVVGSERLLLQIPSAVRCIRPERVLAFQQQTQFLWDAYFSSVDKIVHTTLEIIKDRLSPHRSRSRRLWNALPGGLLVLPDFSTHLGDFPFYYLHHGYSPSKKFTAFIRAVSQAGSLSQPILRLIQAVSGSQYCAQIVVLWSCEKPPPPSGKWPQSSVPLTIIQGRRKLSDRFFPFGAIQTDAVLSLDEDTALSTSEVDFAFSVWLSFPERIVGFPTQSHFWDAERGRWGYTSKWTNELSMVLTAAAFYHRYYHSLFTEYLPAGLRELVDGLAACEDILMNVLVAAVTKLPPIKVTQRKQHKEGVARPAECGQGAAGTPPGPQPAPAGAGGTAGGRRLSQRQDCLNQLANWFGYMPLVSSRLRLDPVLFKDQVSVLRKKYPSLEKP
SIO_010081: EXTL1
subclass of: SO_0000673
so part of: EXTL1
location: complement(join(712017..712425,712510..712670,712777..712863,713006..713101,713363..713481,713567..713699,713772..713891,714290..714397,714478..714571,717313..718247))
location: region:712017-718247:-1
so has part: feature:717313-718247:-1:exon
so has part: feature:714478-714571:-1:exon
so has part: feature:714290-714397:-1:exon
so has part: feature:713772-713891:-1:exon
so has part: feature:713567-713699:-1:exon
so has part: feature:713363-713481:-1:exon
so has part: feature:713006-713101:-1:exon
so has part: feature:712777-712863:-1:exon
so has part: feature:712510-712670:-1:exon
so has part: feature:712017-712425:-1:exon

XP_030820616.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:717313-718247:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:714478-714571:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:714290-714397:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:713772-713891:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:713567-713699:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:713363-713481:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:713006-713101:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:712777-712863:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:712510-712670:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:712017-712425:-1:exon

PAFAH2
type: Gene
subclass of: SO_0000704
RO_0002162: 87175
gene: PAFAH2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 721458..725079
location: region:721458-725079:1
so has part: feature:721458-725079:1:exon
subclass of: SO_0000010

115912948
type: Gene
SIO_000068: ncbigene

position:721458:1
position: 721458
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:725079:1
position: 725079
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:721458-725079:1:exon

PAFAH2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 87175
gene: PAFAH2
product: platelet activating factor acetylhydrolase 2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 15 Proteins, and 84% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_030964761.1
SIO_010081: PAFAH2
subclass of: SO_0000673
so part of: PAFAH2
location: join(721458..721541,721859..722006,722214..722310,722412..722480,722577..722691,723925..724038,724172..724263,724354..724524,724644..724792,724944..725079)
location: region:721458-725079:1
so has part: feature:721458-721541:1:exon
so has part: feature:721859-722006:1:exon
so has part: feature:722214-722310:1:exon
so has part: feature:722412-722480:1:exon
so has part: feature:722577-722691:1:exon
so has part: feature:723925-724038:1:exon
so has part: feature:724172-724263:1:exon
so has part: feature:724354-724524:1:exon
so has part: feature:724644-724792:1:exon
so has part: feature:724944-725079:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:721458-721541:1:exon

position:721541:1
position: 721541
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:721859-722006:1:exon

position:721859:1
position: 721859
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:722006:1
position: 722006
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:722214-722310:1:exon

position:722214:1
position: 722214
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:722310:1
position: 722310
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:722412-722480:1:exon

position:722412:1
position: 722412
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:722480:1
position: 722480
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:722577-722691:1:exon

position:722577:1
position: 722577
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:722691:1
position: 722691
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:723925-724038:1:exon

position:723925:1
position: 723925
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:724038:1
position: 724038
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:724172-724263:1:exon

position:724172:1
position: 724172
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:724263:1
position: 724263
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:724354-724524:1:exon

position:724354:1
position: 724354
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:724524:1
position: 724524
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:724644-724792:1:exon

position:724644:1
position: 724644
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:724792:1
position: 724792
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:724944-725079:1:exon

position:724944:1
position: 724944
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

PAFAH2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 87175
gene: PAFAH2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: platelet-activating factor acetylhydrolase 2, cytoplasmic
translation: MGGMLALPPGQGPHRVGCTDVMVGHTRQGLFLRLFYPCVPGEGAAEPLWVPRPEYCGGLADVTLGRRWCSALLGIAIGSCRVPVSWNGPLKPCSSGYPLIIFSHGLGAFRTLYSSLCTELASWGFVVAALEHRDHSAATTYFCPAEAGTEEWIPFQRVPQGQKEFYFRNKQVHQRAQECVRALRLFQGIAGGRAAPAILPQDWDLSVLKNNLDVTKVAVMGHSFGGVTAVLALVKEPSFRCAVALDAWMFPLENLLYPEVPSPVLFINSDKFQTPESAAKMRRLSSRNRQTRIVTVLGTVHEQHTDLAFLPGKLFSLIFGRRGSLEPHRALAITSQAALAFLQRHLELQEQFGQWDELLEGVGDSVAPGVPFGRSHL
SIO_010081: PAFAH2
subclass of: SO_0000673
so part of: PAFAH2
location: join(721458..721541,721859..722006,722214..722310,722412..722480,722577..722691,723925..724038,724172..724263,724354..724524,724644..724792,724944..725038)
location: region:721458-725038:1
so has part: feature:721458-721541:1:exon
so has part: feature:721859-722006:1:exon
so has part: feature:722214-722310:1:exon
so has part: feature:722412-722480:1:exon
so has part: feature:722577-722691:1:exon
so has part: feature:723925-724038:1:exon
so has part: feature:724172-724263:1:exon
so has part: feature:724354-724524:1:exon
so has part: feature:724644-724792:1:exon
so has part: feature:724944-725038:1:exon

XP_030820621.1
type: Protein
SIO_000068: ncbiprotein

position:725038:1
position: 725038
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:721458-721541:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:721859-722006:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:722214-722310:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:722412-722480:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:722577-722691:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:723925-724038:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:724172-724263:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:724354-724524:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:724644-724792:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:724944-725038:1:exon

STMN1
type: Gene
subclass of: SO_0000704
RO_0002162: 87175
gene: STMN1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 734994..739079
location: region:734994-739079:1
so has part: feature:734994-739079:1:exon
subclass of: SO_0000010

115912953
type: Gene
SIO_000068: ncbigene

position:734994:1
position: 734994
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:739079:1
position: 739079
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:734994-739079:1:exon

STMN1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 87175
gene: STMN1
product: stathmin 1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 63 mRNAs, 95 ESTs, 45 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
transcript id: XM_030964766.1
SIO_010081: STMN1
subclass of: SO_0000673
so part of: STMN1
location: join(734994..735078,736511..736581,737275..737447,738102..738293,738568..739079)
location: region:734994-739079:1
so has part: feature:734994-735078:1:exon
so has part: feature:736511-736581:1:exon
so has part: feature:737275-737447:1:exon
so has part: feature:738102-738293:1:exon
so has part: feature:738568-739079:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:734994-735078:1:exon

position:735078:1
position: 735078
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:736511-736581:1:exon

position:736511:1
position: 736511
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:736581:1
position: 736581
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:737275-737447:1:exon

position:737275:1
position: 737275
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:737447:1
position: 737447
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:738102-738293:1:exon

position:738102:1
position: 738102
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:738293:1
position: 738293
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:738568-739079:1:exon

position:738568:1
position: 738568
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

STMN1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 87175
gene: STMN1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: stathmin
translation: MATSDIQVKELEKRASGQAFELILSPRSKEAVAEFPLSPPKKKDVSLEEIQKKLEAAEERRKSHEAEVLKQLAEKREHEKEVLQKAIEENNNFSKMAEEKLTHKMEANKENREAQMAAKLERLREKDKHVEEVRKNKEGKDPGEAETD
SIO_010081: STMN1
subclass of: SO_0000673
so part of: STMN1
location: join(736569..736581,737275..737447,738102..738293,738568..738636)
location: region:736569-738636:1
so has part: feature:736569-736581:1:exon
so has part: feature:737275-737447:1:exon
so has part: feature:738102-738293:1:exon
so has part: feature:738568-738636:1:exon

XP_030820626.1
type: Protein
SIO_000068: ncbiprotein

position:736569:1
position: 736569
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:738636:1
position: 738636
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:736569-736581:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:737275-737447:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:738102-738293:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:738568-738636:1:exon

PAQR7
type: Gene
subclass of: SO_0000704
RO_0002162: 87175
gene: PAQR7
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 741135..744245
location: region:741135-744245:1
so has part: feature:741135-744245:1:exon
subclass of: SO_0000010

115912949
type: Gene
SIO_000068: ncbigene

position:741135:1
position: 741135
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:744245:1
position: 744245
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:741135-744245:1:exon

PAQR7
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 87175
gene: PAQR7
product: progestin and adipoQ receptor family member 7
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 15 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XM_030964762.1
SIO_010081: PAQR7
subclass of: SO_0000673
so part of: PAQR7
location: join(741135..741500,743017..744245)
location: region:741135-744245:1
so has part: feature:741135-741500:1:exon
so has part: feature:743017-744245:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:741135-741500:1:exon

position:741500:1
position: 741500
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:743017-744245:1:exon

position:743017:1
position: 743017
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

PAQR7
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 87175
gene: PAQR7
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: membrane progestin receptor alpha
translation: MATLVPGKLSQLLISVRQLPGLLGPLSPGTVSSAEVPAVFCKPYIHGGYRPVRQTWRYYFSTLFQQHNEAVNVWSHLVAALVLLLRLQHLWQRVDFGQDAHARPLLIILAASITYLTFSSLAHLLQAKSEFWHYSFFFMDYVGVAVYQYGSALGHFYYAIEPGWHQHVRGFFLPLAAVLAWLSCAGSCYAKFRFHPRCPLPGRLCQELPSGLAYLLDISPVLHRICTAARPDPALLYHKCQVLFFLLAAFFFSHPYPEKWFPGRCHFVGQSHQIFHVFLVLCTLAQIEAVVLDYESRREIYSSLQQGLAHDFSALFLLTVTCSVLTAAYMARRVSNKLGLKEE
SIO_010081: PAQR7
subclass of: SO_0000673
so part of: PAQR7
location: 743048..744079
location: region:743048-744079:1
so has part: feature:743048-744079:1:exon

XP_030820622.1
type: Protein
SIO_000068: ncbiprotein

position:743048:1
position: 743048
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:744079:1
position: 744079
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:743048-744079:1:exon

LOC115912700
type: Gene
subclass of: SO_0000704
RO_0002162: 87175
gene: LOC115912700
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 745126..747554
location: region:745126-747554:1
so has part: feature:745126-747554:1:exon
subclass of: SO_0000010

115912700
type: Gene
SIO_000068: ncbigene

position:745126:1
position: 745126
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:747554:1
position: 747554
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:745126-747554:1:exon

LOC115912700
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 87175
gene: LOC115912700
product: collagen alpha-1(I) chain-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 93% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_030964361.1
SIO_010081: LOC115912700
subclass of: SO_0000673
so part of: LOC115912700
location: join(745126..745268,745771..746023,746608..747080,747338..747554)
location: region:745126-747554:1
so has part: feature:745126-745268:1:exon
so has part: feature:745771-746023:1:exon
so has part: feature:746608-747080:1:exon
so has part: feature:747338-747554:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:745126-745268:1:exon

position:745268:1
position: 745268
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:745771-746023:1:exon

position:745771:1
position: 745771
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:746023:1
position: 746023
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:746608-747080:1:exon

position:746608:1
position: 746608
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:747080:1
position: 747080
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:747338-747554:1:exon

position:747338:1
position: 747338
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC115912700
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 87175
gene: LOC115912700
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: collagen alpha-1(I) chain-like
translation: MRRRRGGGAAPAEACGVWLDTAELKRGRAPVGAVPQRWQRGTVGFIFILIFFTCFSPQPLALRAPSRAAGRKQSLGLLPQPGSRESSIPRQSSIPWQSSIPWQSSILSFFSPQPDERDKENRRPAPCQDSRVKILPLPQLEGAQEEPPGAGQGLQGTARAGPAALEPPVGSERLSRASPGARGGSRRWGRDEPWVSPAGTAPAGRRAVPCSRAGAGDTKPAPGAAPSAVCCSPQSPGPAQPLRERGQVPAGPCRGSQGCQGRDSDRGRDSDRPSPPQPPELGSEPLFTQDSEGNRVIKHW
SIO_010081: LOC115912700
subclass of: SO_0000673
so part of: LOC115912700
location: join(745179..745268,745771..746023,746608..747080,747338..747424)
location: region:745179-747424:1
so has part: feature:745179-745268:1:exon
so has part: feature:745771-746023:1:exon
so has part: feature:746608-747080:1:exon
so has part: feature:747338-747424:1:exon

XP_030820221.1
type: Protein
SIO_000068: ncbiprotein

position:745179:1
position: 745179
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:747424:1
position: 747424
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:745179-745268:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:745771-746023:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:746608-747080:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:747338-747424:1:exon

MTFR1L
type: Gene
subclass of: SO_0000704
RO_0002162: 87175
gene: MTFR1L
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(747926..752366)
location: region:747926-752366:-1
so has part: feature:747926-752366:-1:exon
subclass of: SO_0000010

115912951
type: Gene
SIO_000068: ncbigene

position:747926:-1
position: 747926
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:752366:-1
position: 752366
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:747926-752366:-1:exon

MTFR1L
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 87175
gene: MTFR1L
product: mitochondrial fission regulator 1 like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 7 ESTs, 12 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
transcript id: XM_030964765.1
SIO_010081: MTFR1L
subclass of: SO_0000673
so part of: MTFR1L
location: complement(join(747926..748813,749390..749705,750035..750246,750709..750818,751409..751513,752131..752193,752269..752366))
location: region:747926-752366:-1
so has part: feature:752269-752366:-1:exon
so has part: feature:752131-752193:-1:exon
so has part: feature:751409-751513:-1:exon
so has part: feature:750709-750818:-1:exon
so has part: feature:750035-750246:-1:exon
so has part: feature:749390-749705:-1:exon
so has part: feature:747926-748813:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:752269-752366:-1:exon

position:752269:-1
position: 752269
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:752131-752193:-1:exon

position:752131:-1
position: 752131
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:752193:-1
position: 752193
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:751409-751513:-1:exon

position:751409:-1
position: 751409
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:751513:-1
position: 751513
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:750709-750818:-1:exon

position:750709:-1
position: 750709
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:750818:-1
position: 750818
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:750035-750246:-1:exon

position:750035:-1
position: 750035
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:750246:-1
position: 750246
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:749390-749705:-1:exon

position:749390:-1
position: 749390
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:749705:-1
position: 749705
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:747926-748813:-1:exon

position:748813:-1
position: 748813
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

MTFR1L
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 87175
gene: MTFR1L
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: mitochondrial fission regulator 1-like
translation: MDAEATIPIWQNKPHGSARSVVRMIGSNLPLKPCPRATFEVLPSVSDLYLGDVPPVPTLADIVWIAADDEETYARVRSDTRPLKHKWKPSPFTVIQRNASVPNLRKQEEKLLALKKPGLPALSRTTELQDELSHLRSQIAKIVAAQSASAQLTPDLLSPGSSNASSPVHCFGPSFQSTTSFVISDITEEEAELESPEAPSVAELPPLCSAPEGRPEPRDPDEEDSVSLSKASSFADMMGILKDIHRMKQSKDLSRPSLKQEDPAVLIAEVLRRKFALKDEDLALKEK
SIO_010081: MTFR1L
subclass of: SO_0000673
so part of: MTFR1L
location: complement(join(748708..748813,749390..749705,750035..750246,750709..750818,751409..751513,752131..752145))
location: region:748708-752145:-1
so has part: feature:752131-752145:-1:exon
so has part: feature:751409-751513:-1:exon
so has part: feature:750709-750818:-1:exon
so has part: feature:750035-750246:-1:exon
so has part: feature:749390-749705:-1:exon
so has part: feature:748708-748813:-1:exon

XP_030820625.1
type: Protein
SIO_000068: ncbiprotein

position:748708:-1
position: 748708
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:752145:-1
position: 752145
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:752131-752145:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:751409-751513:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:750709-750818:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:750035-750246:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:749390-749705:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:748708-748813:-1:exon

SELENON
type: Gene
subclass of: SO_0000704
RO_0002162: 87175
gene: SELENON
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(752644..764609)
location: region:752644-764609:-1
so has part: feature:752644-764609:-1:exon
subclass of: SO_0000010

115912947
type: Gene
SIO_000068: ncbigene

position:752644:-1
position: 752644
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:764609:-1
position: 764609
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:752644-764609:-1:exon

SELENON
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 87175
gene: SELENON
product: selenoprotein N
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 5 ESTs, 9 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XM_030964760.1
SIO_010081: SELENON
subclass of: SO_0000673
so part of: SELENON
location: complement(join(752644..754702,755053..755154,755773..755885,756640..756745,757670..757858,758740..758821,759589..759726,760381..760505,761120..761332,761770..761900,762883..763000,764483..764609))
location: region:752644-764609:-1
so has part: feature:764483-764609:-1:exon
so has part: feature:762883-763000:-1:exon
so has part: feature:761770-761900:-1:exon
so has part: feature:761120-761332:-1:exon
so has part: feature:760381-760505:-1:exon
so has part: feature:759589-759726:-1:exon
so has part: feature:758740-758821:-1:exon
so has part: feature:757670-757858:-1:exon
so has part: feature:756640-756745:-1:exon
so has part: feature:755773-755885:-1:exon
so has part: feature:755053-755154:-1:exon
so has part: feature:752644-754702:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:764483-764609:-1:exon

position:764483:-1
position: 764483
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:762883-763000:-1:exon

position:762883:-1
position: 762883
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:763000:-1
position: 763000
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:761770-761900:-1:exon

position:761770:-1
position: 761770
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:761900:-1
position: 761900
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:761120-761332:-1:exon

position:761120:-1
position: 761120
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:761332:-1
position: 761332
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:760381-760505:-1:exon

position:760381:-1
position: 760381
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:760505:-1
position: 760505
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:759589-759726:-1:exon

position:759589:-1
position: 759589
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:759726:-1
position: 759726
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:758740-758821:-1:exon

position:758740:-1
position: 758740
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:758821:-1
position: 758821
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:757670-757858:-1:exon

position:757670:-1
position: 757670
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:757858:-1
position: 757858
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:756640-756745:-1:exon

position:756640:-1
position: 756640
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:756745:-1
position: 756745
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:755773-755885:-1:exon

position:755773:-1
position: 755773
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:755885:-1
position: 755885
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:755053-755154:-1:exon

position:755053:-1
position: 755053
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:755154:-1
position: 755154
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:752644-754702:-1:exon

position:754702:-1
position: 754702
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

SELENON
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 87175
gene: SELENON
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
transl except: (pos:complement(756641..756643),aa:Sec)
product: selenoprotein N
translation: MAGPGPGPAPPRLALALALLAALLAAKYYRDAEAARQQELALKSLGKEGLFLFSSLDTNKDLYLSPEEFKPIAEKLTGVAPVSESEEEETLDPDGETLSIVAKFQPLLMETMTKSKDGFLGISHVALSGLRNWTAPAAPMSVLLARQFRAFLPPKDNLDLGDPWWIIPSELNIFTGYLSNNRFYPPPPKGKEVLIHRLLSMFHPRPFVRTRFAPQGAVACLQASSSFYYTIAFRIHAEFQLNEPPNFPFWFSPGQFTGYIILSKDSSHVRDFRLFVPNNRSLNVDMEWLYGASESSNMEVDIGYLPQMELESAGPSVPSVIRDEDGKVLASRDPSGEPIQFVFEEITWQQQIPWQEAARRLEVAMYPFKKVSYLPFTEAFERAQAEKKLVHSILLWGALDDQSCUGSGRTLRETVLESSPILALLNESFISSWSLVKELEELQSNRENELHSKLAKLHLEKYNFPVEMIICLPNGTVIHHINANYFLDITSMQPEDVESSIFSFSTNFEDPSTATYLQFLKEGLHRAKPYLQP
SIO_010081: SELENON
subclass of: SO_0000673
so part of: SELENON
location: complement(join(754532..754702,755053..755154,755773..755885,756640..756745,757670..757858,758740..758821,759589..759726,760381..760505,761120..761332,761770..761900,762883..763000,764483..764596))
location: region:754532-764596:-1
so has part: feature:764483-764596:-1:exon
so has part: feature:762883-763000:-1:exon
so has part: feature:761770-761900:-1:exon
so has part: feature:761120-761332:-1:exon
so has part: feature:760381-760505:-1:exon
so has part: feature:759589-759726:-1:exon
so has part: feature:758740-758821:-1:exon
so has part: feature:757670-757858:-1:exon
so has part: feature:756640-756745:-1:exon
so has part: feature:755773-755885:-1:exon
so has part: feature:755053-755154:-1:exon
so has part: feature:754532-754702:-1:exon

XP_030820620.1
type: Protein
SIO_000068: ncbiprotein

position:754532:-1
position: 754532
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:764596:-1
position: 764596
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:764483-764596:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:762883-763000:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:761770-761900:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:761120-761332:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:760381-760505:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:759589-759726:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:758740-758821:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:757670-757858:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:756640-756745:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:755773-755885:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:755053-755154:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:754532-754702:-1:exon

MAN1C1
type: Gene
subclass of: SO_0000704
RO_0002162: 87175
gene: MAN1C1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(767617..818550)
location: region:767617-818550:-1
so has part: feature:767617-818550:-1:exon
subclass of: SO_0000010

115912946
type: Gene
SIO_000068: ncbigene

position:767617:-1
position: 767617
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:818550:-1
position: 818550
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:767617-818550:-1:exon

MAN1C1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 87175
gene: MAN1C1
product: mannosidase alpha class 1C member 1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_030964759.1
SIO_010081: MAN1C1
subclass of: SO_0000673
so part of: MAN1C1
location: complement(join(767617..768583,769008..769123,769512..769684,770168..770387,770563..770678,773568..773661,775653..775776,779221..779315,781219..781299,782686..782801,800034..800130,816605..817522,818248..818550))
location: region:767617-818550:-1
so has part: feature:818248-818550:-1:exon
so has part: feature:816605-817522:-1:exon
so has part: feature:800034-800130:-1:exon
so has part: feature:782686-782801:-1:exon
so has part: feature:781219-781299:-1:exon
so has part: feature:779221-779315:-1:exon
so has part: feature:775653-775776:-1:exon
so has part: feature:773568-773661:-1:exon
so has part: feature:770563-770678:-1:exon
so has part: feature:770168-770387:-1:exon
so has part: feature:769512-769684:-1:exon
so has part: feature:769008-769123:-1:exon
so has part: feature:767617-768583:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:818248-818550:-1:exon

position:818248:-1
position: 818248
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:816605-817522:-1:exon

position:816605:-1
position: 816605
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:817522:-1
position: 817522
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:800034-800130:-1:exon

position:800034:-1
position: 800034
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:800130:-1
position: 800130
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:782686-782801:-1:exon

position:782686:-1
position: 782686
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:782801:-1
position: 782801
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:781219-781299:-1:exon

position:781219:-1
position: 781219
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:781299:-1
position: 781299
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:779221-779315:-1:exon

position:779221:-1
position: 779221
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:779315:-1
position: 779315
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:775653-775776:-1:exon

position:775653:-1
position: 775653
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:775776:-1
position: 775776
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:773568-773661:-1:exon

position:773568:-1
position: 773568
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:773661:-1
position: 773661
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:770563-770678:-1:exon

position:770563:-1
position: 770563
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:770678:-1
position: 770678
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:770168-770387:-1:exon

position:770168:-1
position: 770168
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:770387:-1
position: 770387
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:769512-769684:-1:exon

position:769512:-1
position: 769512
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:769684:-1
position: 769684
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:769008-769123:-1:exon

position:769008:-1
position: 769008
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:769123:-1
position: 769123
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:767617-768583:-1:exon

position:768583:-1
position: 768583
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

MAN1C1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 87175
gene: MAN1C1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: mannosyl-oligosaccharide 1,2-alpha-mannosidase IC
translation: MVVLRKLPGMPGWPAALGLRLPQKFLFLLFLSGLLTLCFGALFLLPDSSRFKRLFLPRRATASASSSSSASSSSASSSSTRDTDLPRSPPAAAEPRHASPAAPRRLREKLRTAARMAGPPARTAPGSRQQVQGGESRAQPASAAPPARETRAPFRFDYERFRRSLRHPVRGGRSGEDPETRARRMKIKEMMKFAWDNYKQYALGKNELRPLTKNGHIGNMFGGLRGATVIDALDTLYIMELEEEFQEAKQWVEKSFDLNVNGEASLFEVNIRYIGGLLATYYLTGEEVFKSKALELGEKLLPAFNTPTGIPRGVINLGSGMSWSWGWASAGSSILAEFGTLHLEFLHLSELSGNPVFAEKVRNIRRVLSRVEKPQGLYPNFLSPVTGSWVQHHVSIGGLGDSFYEYLIKSWLMSDKKDSEAKKMYDDALEAIEKHLVKKSAGGLTYIAEWRGGILDHKMGHLACFSGGMIALGAQHSPGDRRQRHMELAAEITSTCHESYARSDTKLGPEAFRFDAGSEATATRLSERYYILRPEVVESYMYLWRLTHQPKYRHWGWEVVQALEKYCRVEAGFSGIRDVYTTTPTHDNMQQSFFLAETLKYLYLLFCEDDVLSLEDWVFNTEAHPLPINHTDLKAAGQP
SIO_010081: MAN1C1
subclass of: SO_0000673
so part of: MAN1C1
location: complement(join(768463..768583,769008..769123,769512..769684,770168..770387,770563..770678,773568..773661,775653..775776,779221..779315,781219..781299,782686..782801,800034..800130,816605..817171))
location: region:768463-817171:-1
so has part: feature:816605-817171:-1:exon
so has part: feature:800034-800130:-1:exon
so has part: feature:782686-782801:-1:exon
so has part: feature:781219-781299:-1:exon
so has part: feature:779221-779315:-1:exon
so has part: feature:775653-775776:-1:exon
so has part: feature:773568-773661:-1:exon
so has part: feature:770563-770678:-1:exon
so has part: feature:770168-770387:-1:exon
so has part: feature:769512-769684:-1:exon
so has part: feature:769008-769123:-1:exon
so has part: feature:768463-768583:-1:exon

XP_030820619.1
type: Protein
SIO_000068: ncbiprotein

position:768463:-1
position: 768463
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:817171:-1
position: 817171
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:816605-817171:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:800034-800130:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:782686-782801:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:781219-781299:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:779221-779315:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:775653-775776:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:773568-773661:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:770563-770678:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:770168-770387:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:769512-769684:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:769008-769123:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:768463-768583:-1:exon

LDLRAP1
type: Gene
subclass of: SO_0000704
RO_0002162: 87175
gene: LDLRAP1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(830173..839951)
location: region:830173-839951:-1
so has part: feature:830173-839951:-1:exon
subclass of: SO_0000010

115912950
type: Gene
SIO_000068: ncbigene

position:830173:-1
position: 830173
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:839951:-1
position: 839951
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:830173-839951:-1:exon

LDLRAP1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 87175
gene: LDLRAP1
product: low density lipoprotein receptor adaptor protein 1, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 13 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_030964764.1
SIO_010081: LDLRAP1
subclass of: SO_0000673
so part of: LDLRAP1
location: complement(join(830173..831882,832543..832577,833059..833186,833662..833745,834385..834457,836452..836566,837623..837735,838427..838569,839817..839951))
location: region:830173-839951:-1
so has part: feature:839817-839951:-1:exon
so has part: feature:838427-838569:-1:exon
so has part: feature:837623-837735:-1:exon
so has part: feature:836452-836566:-1:exon
so has part: feature:834385-834457:-1:exon
so has part: feature:833662-833745:-1:exon
so has part: feature:833059-833186:-1:exon
so has part: feature:832543-832577:-1:exon
so has part: feature:830173-831882:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:839817-839951:-1:exon

position:839817:-1
position: 839817
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:838427-838569:-1:exon

position:838427:-1
position: 838427
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:838569:-1
position: 838569
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:837623-837735:-1:exon

position:837623:-1
position: 837623
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:837735:-1
position: 837735
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:836452-836566:-1:exon

position:836452:-1
position: 836452
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:836566:-1
position: 836566
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:834385-834457:-1:exon

position:834385:-1
position: 834385
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:834457:-1
position: 834457
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:833662-833745:-1:exon

position:833662:-1
position: 833662
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:833745:-1
position: 833745
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:833059-833186:-1:exon

position:833059:-1
position: 833059
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:833186:-1
position: 833186
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:832543-832577:-1:exon

position:832543:-1
position: 832543
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:832577:-1
position: 832577
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:830173-831882:-1:exon

position:831882:-1
position: 831882
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LDLRAP1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 87175
gene: LDLRAP1
product: low density lipoprotein receptor adaptor protein 1, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 15 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
transcript id: XM_030964763.1
SIO_010081: LDLRAP1
subclass of: SO_0000673
so part of: LDLRAP1
location: complement(join(830173..831882,832543..832577,833059..833189,833662..833745,834385..834457,836452..836566,837623..837735,838427..838569,839817..839951))
location: region:830173-839951:-1
so has part: feature:839817-839951:-1:exon
so has part: feature:838427-838569:-1:exon
so has part: feature:837623-837735:-1:exon
so has part: feature:836452-836566:-1:exon
so has part: feature:834385-834457:-1:exon
so has part: feature:833662-833745:-1:exon
so has part: feature:833059-833189:-1:exon
so has part: feature:832543-832577:-1:exon
so has part: feature:830173-831882:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:839817-839951:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:838427-838569:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:837623-837735:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:836452-836566:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:834385-834457:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:833662-833745:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:833059-833189:-1:exon

position:833189:-1
position: 833189
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:832543-832577:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:830173-831882:-1:exon

LDLRAP1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 87175
gene: LDLRAP1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: low density lipoprotein receptor adapter protein 1 isoform X2
translation: MDALKSAGRALLRSPSVHKPSWAGGRHKKLPENWTDTRETLLEGMLFSLKYLGMTLVEQPKGEELSAAAVKRIVATAKASGKKLQKVTLKVSPRGIVLRDSRSSELIENISIYRISYCTADKAHDKVFAYIAQSQQSESLECHAFLCPKRKMAQAVTLTVAQAFRLAFEFWQAAKEEKEKRERSILAAEGTSSPGSGAPAHPGTAALGNLLDLEEPGRSPLGGSTEPPALDNSSFGPSPSVNNNLEWEMDDGLDEAFSRLAQSRTNPQELDTGLSAQEAAEALSPLHWTQLEPSPAEQDDLFMF
SIO_010081: LDLRAP1
subclass of: SO_0000673
so part of: LDLRAP1
location: complement(join(831744..831882,832543..832577,833059..833186,833662..833745,834385..834457,836452..836566,837623..837735,838427..838569,839817..839901))
location: region:831744-839901:-1
so has part: feature:839817-839901:-1:exon
so has part: feature:838427-838569:-1:exon
so has part: feature:837623-837735:-1:exon
so has part: feature:836452-836566:-1:exon
so has part: feature:834385-834457:-1:exon
so has part: feature:833662-833745:-1:exon
so has part: feature:833059-833186:-1:exon
so has part: feature:832543-832577:-1:exon
so has part: feature:831744-831882:-1:exon

XP_030820624.1
type: Protein
SIO_000068: ncbiprotein

position:831744:-1
position: 831744
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:839901:-1
position: 839901
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:839817-839901:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:838427-838569:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:837623-837735:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:836452-836566:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:834385-834457:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:833662-833745:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:833059-833186:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:832543-832577:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:831744-831882:-1:exon

LDLRAP1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 87175
gene: LDLRAP1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: low density lipoprotein receptor adapter protein 1 isoform X1
translation: MDALKSAGRALLRSPSVHKPSWAGGRHKKLPENWTDTRETLLEGMLFSLKYLGMTLVEQPKGEELSAAAVKRIVATAKASGKKLQKVTLKVSPRGIVLRDSRSSELIENISIYRISYCTADKAHDKVFAYIAQSQQSESLECHAFLCPKRKMAQAVTLTVAQAFRLAFEFWQAAKEEKEKRERSILAAEGTSSPGSGAPAHPGTAAALGNLLDLEEPGRSPLGGSTEPPALDNSSFGPSPSVNNNLEWEMDDGLDEAFSRLAQSRTNPQELDTGLSAQEAAEALSPLHWTQLEPSPAEQDDLFMF
SIO_010081: LDLRAP1
subclass of: SO_0000673
so part of: LDLRAP1
location: complement(join(831744..831882,832543..832577,833059..833189,833662..833745,834385..834457,836452..836566,837623..837735,838427..838569,839817..839901))
location: region:831744-839901:-1
so has part: feature:839817-839901:-1:exon
so has part: feature:838427-838569:-1:exon
so has part: feature:837623-837735:-1:exon
so has part: feature:836452-836566:-1:exon
so has part: feature:834385-834457:-1:exon
so has part: feature:833662-833745:-1:exon
so has part: feature:833059-833189:-1:exon
so has part: feature:832543-832577:-1:exon
so has part: feature:831744-831882:-1:exon

XP_030820623.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:839817-839901:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:838427-838569:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:837623-837735:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:836452-836566:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:834385-834457:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:833662-833745:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:833059-833189:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:832543-832577:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:831744-831882:-1:exon

MACO1
type: Gene
subclass of: SO_0000704
RO_0002162: 87175
gene: MACO1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(848949..872043)
location: region:848949-872043:-1
so has part: feature:848949-872043:-1:exon
subclass of: SO_0000010

115912914
type: Gene
SIO_000068: ncbigene

position:848949:-1
position: 848949
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:872043:-1
position: 872043
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:848949-872043:-1:exon

MACO1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 87175
gene: MACO1
product: macoilin 1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 8 ESTs, 13 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_030964711.1
SIO_010081: MACO1
subclass of: SO_0000673
so part of: MACO1
location: complement(join(848949..849694,851551..851725,853422..853542,854249..854431,855333..855491,860886..861384,862228..862406,862741..862864,864030..864156,864891..865032,871788..872043))
location: region:848949-872043:-1
so has part: feature:871788-872043:-1:exon
so has part: feature:864891-865032:-1:exon
so has part: feature:864030-864156:-1:exon
so has part: feature:862741-862864:-1:exon
so has part: feature:862228-862406:-1:exon
so has part: feature:860886-861384:-1:exon
so has part: feature:855333-855491:-1:exon
so has part: feature:854249-854431:-1:exon
so has part: feature:853422-853542:-1:exon
so has part: feature:851551-851725:-1:exon
so has part: feature:848949-849694:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:871788-872043:-1:exon

position:871788:-1
position: 871788
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:864891-865032:-1:exon

position:864891:-1
position: 864891
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:865032:-1
position: 865032
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:864030-864156:-1:exon

position:864030:-1
position: 864030
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:864156:-1
position: 864156
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:862741-862864:-1:exon

position:862741:-1
position: 862741
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:862864:-1
position: 862864
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:862228-862406:-1:exon

position:862228:-1
position: 862228
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:862406:-1
position: 862406
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:860886-861384:-1:exon

position:860886:-1
position: 860886
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:861384:-1
position: 861384
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:855333-855491:-1:exon

position:855333:-1
position: 855333
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:855491:-1
position: 855491
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:854249-854431:-1:exon

position:854249:-1
position: 854249
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:854431:-1
position: 854431
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:853422-853542:-1:exon

position:853422:-1
position: 853422
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:853542:-1
position: 853542
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:851551-851725:-1:exon

position:851551:-1
position: 851551
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:851725:-1
position: 851725
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:848949-849694:-1:exon

position:849694:-1
position: 849694
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

MACO1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 87175
gene: MACO1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: macoilin
translation: MKRRSADCSKLRRPLKRNRITEGIYGSTFLYLKFLVVWALVLLADFVLEFRFEYLWPFWLFIRSVYDSFRYQGLAFSVFFVCVAFTSNIICLLFIPIQWLFFAASTYVWVQYVWHTERGVCLPTVSLWILFVYIEAAIRFKDLKNFHVDLCRPFAAHCIGYPVVTLGFGFKSYVSYKMRLRKQKEVQKENEFYMQLLQQALPPEQQMLQRQEREAEEAAKGLSDMDSSILLQHNGGIPANKKISATLPELEYREKGKEKDKDAKKHNLGINNNILQPVDSKIQEIEYMENHINSKRLNNDLVGSTENLLKEDSCTASSKNYKNVSGVVNSSPRSHSATNGSIPSSSSKNEKKQKCASKSPSTHKDLMENCIPNNQLSKPDALVRLEQDIKKLKADLQASRQVEQELRSQVSSLSSAERGARAETGQLRQENELLQNKLHNAVQMKQKDKQMISQLEKKLKAEQEARTFVEKQLMEEKKRKKLEEATAARAVAFAAATRGECTETLRSRIRELETECKKLSIDIKLKEDQIRELEIKVQELRKYKENEKDTEVLMSALSAMQDKTQHLENSLSAETRIKLDLFSALGDAKRQLEIAQGQILQKDQEIKELKQKIAEVMAVMPSITYTAATSTLSPVSPHYSSKFVEPSPSGLDPNASVYQPLKK
SIO_010081: MACO1
subclass of: SO_0000673
so part of: MACO1
location: complement(join(849492..849694,851551..851725,853422..853542,854249..854431,855333..855491,860886..861384,862228..862406,862741..862864,864030..864156,864891..865032,871788..871867))
location: region:849492-871867:-1
so has part: feature:871788-871867:-1:exon
so has part: feature:864891-865032:-1:exon
so has part: feature:864030-864156:-1:exon
so has part: feature:862741-862864:-1:exon
so has part: feature:862228-862406:-1:exon
so has part: feature:860886-861384:-1:exon
so has part: feature:855333-855491:-1:exon
so has part: feature:854249-854431:-1:exon
so has part: feature:853422-853542:-1:exon
so has part: feature:851551-851725:-1:exon
so has part: feature:849492-849694:-1:exon

XP_030820571.1
type: Protein
SIO_000068: ncbiprotein

position:849492:-1
position: 849492
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:871867:-1
position: 871867
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:871788-871867:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:864891-865032:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:864030-864156:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:862741-862864:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:862228-862406:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:860886-861384:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:855333-855491:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:854249-854431:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:853422-853542:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:851551-851725:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:849492-849694:-1:exon

LOC115912856
type: Gene
subclass of: SO_0000704
RO_0002162: 87175
gene: LOC115912856
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 874035..880967
location: region:874035-880967:1
so has part: feature:874035-880967:1:exon
subclass of: SO_0000010

115912856
type: Gene
SIO_000068: ncbigene

position:874035:1
position: 874035
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:880967:1
position: 880967
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:874035-880967:1:exon

LOC115912856
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 87175
gene: LOC115912856
product: RH-like protein
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XM_030964635.1
SIO_010081: LOC115912856
subclass of: SO_0000673
so part of: LOC115912856
location: join(874035..874279,874737..874923,875145..875295,875411..875552,877008..877165,877599..877736,877967..878112,878685..878764,879788..879861,880142..880967)
location: region:874035-880967:1
so has part: feature:874035-874279:1:exon
so has part: feature:874737-874923:1:exon
so has part: feature:875145-875295:1:exon
so has part: feature:875411-875552:1:exon
so has part: feature:877008-877165:1:exon
so has part: feature:877599-877736:1:exon
so has part: feature:877967-878112:1:exon
so has part: feature:878685-878764:1:exon
so has part: feature:879788-879861:1:exon
so has part: feature:880142-880967:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:874035-874279:1:exon

position:874279:1
position: 874279
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:874737-874923:1:exon

position:874737:1
position: 874737
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:874923:1
position: 874923
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:875145-875295:1:exon

position:875145:1
position: 875145
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:875295:1
position: 875295
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:875411-875552:1:exon

position:875411:1
position: 875411
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:875552:1
position: 875552
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:877008-877165:1:exon

position:877008:1
position: 877008
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:877165:1
position: 877165
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:877599-877736:1:exon

position:877599:1
position: 877599
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:877736:1
position: 877736
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:877967-878112:1:exon

position:877967:1
position: 877967
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:878112:1
position: 878112
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:878685-878764:1:exon

position:878685:1
position: 878685
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:878764:1
position: 878764
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:879788-879861:1:exon

position:879788:1
position: 879788
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:879861:1
position: 879861
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:880142-880967:1:exon

position:880142:1
position: 880142
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC115912856
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 87175
gene: LOC115912856
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: RH-like protein
translation: MPSRYRSFRCSVPWLILLLQALLLLRSFLGFPGVSDTYSPSNSYPEFQDVNHMVIFGFGFFLMVLRRYGFSSTGFNFLLVVLGVQCSMLAEDLLVFLRGEQNEVGLESLARAFVSVTAVVISTGAVLGRANPVQLIVMTLVELTFFYVSRYINERFLEVPAPLTGMHVYLFGAYFGLALASRFPEAPPGLDKSRSTPKSELFSVLGTVFVWVFWPSFNSILPFLKMQAVINTYLALAVSAVAAFMLSALTSKDGKFRMAQIRSAVLAGGVTISYTAERIHHPWIAMILGLLGSVITILGSHCVQRCFNPALKLQDTSGVHFTFGLPAVLGAVATVVLIVVEDGIDTRWNELSRLGYDAFVYIGAFCQTISTALITGLITGLILNIKLLKAVHVSKYFDDQFYWEFPHLSVGF
SIO_010081: LOC115912856
subclass of: SO_0000673
so part of: LOC115912856
location: join(874144..874279,874737..874923,875145..875295,875411..875552,877008..877165,877599..877736,877967..878112,878685..878764,879788..879861,880142..880168)
location: region:874144-880168:1
so has part: feature:874144-874279:1:exon
so has part: feature:874737-874923:1:exon
so has part: feature:875145-875295:1:exon
so has part: feature:875411-875552:1:exon
so has part: feature:877008-877165:1:exon
so has part: feature:877599-877736:1:exon
so has part: feature:877967-878112:1:exon
so has part: feature:878685-878764:1:exon
so has part: feature:879788-879861:1:exon
so has part: feature:880142-880168:1:exon

XP_030820495.1
type: Protein
SIO_000068: ncbiprotein

position:874144:1
position: 874144
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:880168:1
position: 880168
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:874144-874279:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:874737-874923:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:875145-875295:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:875411-875552:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:877008-877165:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:877599-877736:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:877967-878112:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:878685-878764:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:879788-879861:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:880142-880168:1:exon

TMEM50A
type: Gene
subclass of: SO_0000704
RO_0002162: 87175
gene: TMEM50A
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(881347..885186)
location: region:881347-885186:-1
so has part: feature:881347-885186:-1:exon
subclass of: SO_0000010

115912817
type: Gene
SIO_000068: ncbigene

position:881347:-1
position: 881347
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:885186:-1
position: 885186
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:881347-885186:-1:exon

TMEM50A
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 87175
gene: TMEM50A
product: transmembrane protein 50A, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 8 mRNAs, 15 ESTs, 6 Proteins, and 98% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XM_030964568.1
SIO_010081: TMEM50A
subclass of: SO_0000673
so part of: TMEM50A
location: complement(join(881347..881778,882012..882072,882468..882560,883232..883299,883706..883818,884578..884680,885136..885186))
location: region:881347-885186:-1
so has part: feature:885136-885186:-1:exon
so has part: feature:884578-884680:-1:exon
so has part: feature:883706-883818:-1:exon
so has part: feature:883232-883299:-1:exon
so has part: feature:882468-882560:-1:exon
so has part: feature:882012-882072:-1:exon
so has part: feature:881347-881778:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:885136-885186:-1:exon

position:885136:-1
position: 885136
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:884578-884680:-1:exon

position:884578:-1
position: 884578
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:884680:-1
position: 884680
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:883706-883818:-1:exon

position:883706:-1
position: 883706
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:883818:-1
position: 883818
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:883232-883299:-1:exon

position:883232:-1
position: 883232
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:883299:-1
position: 883299
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:882468-882560:-1:exon

position:882468:-1
position: 882468
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:882560:-1
position: 882560
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:882012-882072:-1:exon

position:882012:-1
position: 882012
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:882072:-1
position: 882072
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:881347-881778:-1:exon

position:881778:-1
position: 881778
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

TMEM50A
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 87175
gene: TMEM50A
product: transmembrane protein 50A, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 8 mRNAs, 14 ESTs, 6 Proteins, and 98% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XM_030964569.1
SIO_010081: TMEM50A
subclass of: SO_0000673
so part of: TMEM50A
location: complement(join(881347..881778,882012..882072,882468..882560,883232..883299,883706..883818,884578..884680,885089..885113))
location: region:881347-885113:-1
so has part: feature:885089-885113:-1:exon
so has part: feature:884578-884680:-1:exon
so has part: feature:883706-883818:-1:exon
so has part: feature:883232-883299:-1:exon
so has part: feature:882468-882560:-1:exon
so has part: feature:882012-882072:-1:exon
so has part: feature:881347-881778:-1:exon

position:885113:-1
position: 885113
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:885089-885113:-1:exon

position:885089:-1
position: 885089
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:884578-884680:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:883706-883818:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:883232-883299:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:882468-882560:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:882012-882072:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:881347-881778:-1:exon

TMEM50A
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 87175
gene: TMEM50A
product: transmembrane protein 50A, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 mRNAs, 14 ESTs, 6 Proteins, and 98% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_030964567.1
SIO_010081: TMEM50A
subclass of: SO_0000673
so part of: TMEM50A
location: complement(join(881347..881778,882012..882072,882468..882560,883232..883299,883706..883818,884578..884680,885066..885086))
location: region:881347-885086:-1
so has part: feature:885066-885086:-1:exon
so has part: feature:884578-884680:-1:exon
so has part: feature:883706-883818:-1:exon
so has part: feature:883232-883299:-1:exon
so has part: feature:882468-882560:-1:exon
so has part: feature:882012-882072:-1:exon
so has part: feature:881347-881778:-1:exon

position:885086:-1
position: 885086
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:885066-885086:-1:exon

position:885066:-1
position: 885066
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:884578-884680:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:883706-883818:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:883232-883299:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:882468-882560:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:882012-882072:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:881347-881778:-1:exon

TMEM50A
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 87175
gene: TMEM50A
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: transmembrane protein 50A isoform X1
translation: MQGPGRGAMSGFLESLRCSECVDWGEKRNTIASVAAGVLFFTGWWIIIDAAVKYPQVEDFNHSYHACGVIATIAFLMINAVSNGQVRGDSYSEGCLGQTGARIWLFLGFMMAFGSLIASMWILFGGYVVKEKPVVYPGIAVFFQNAFIFFGGLVFKFGRTEDLWQ
SIO_010081: TMEM50A
subclass of: SO_0000673
so part of: TMEM50A
location: complement(join(881733..881778,882012..882072,882468..882560,883232..883299,883706..883818,884578..884680,885066..885079))
location: region:881733-885079:-1
so has part: feature:885066-885079:-1:exon
so has part: feature:884578-884680:-1:exon
so has part: feature:883706-883818:-1:exon
so has part: feature:883232-883299:-1:exon
so has part: feature:882468-882560:-1:exon
so has part: feature:882012-882072:-1:exon
so has part: feature:881733-881778:-1:exon

XP_030820427.1
type: Protein
SIO_000068: ncbiprotein

position:881733:-1
position: 881733
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:885079:-1
position: 885079
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:885066-885079:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:884578-884680:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:883706-883818:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:883232-883299:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:882468-882560:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:882012-882072:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:881733-881778:-1:exon

TMEM50A
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 87175
gene: TMEM50A
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: transmembrane protein 50A isoform X2
translation: MSGFLESLRCSECVDWGEKRNTIASVAAGVLFFTGWWIIIDAAVKYPQVEDFNHSYHACGVIATIAFLMINAVSNGQVRGDSYSEGCLGQTGARIWLFLGFMMAFGSLIASMWILFGGYVVKEKPVVYPGIAVFFQNAFIFFGGLVFKFGRTEDLWQ
SIO_010081: TMEM50A
subclass of: SO_0000673
so part of: TMEM50A
location: complement(join(881733..881778,882012..882072,882468..882560,883232..883299,883706..883818,884578..884670))
location: region:881733-884670:-1
so has part: feature:884578-884670:-1:exon
so has part: feature:883706-883818:-1:exon
so has part: feature:883232-883299:-1:exon
so has part: feature:882468-882560:-1:exon
so has part: feature:882012-882072:-1:exon
so has part: feature:881733-881778:-1:exon

XP_030820428.1
type: Protein
SIO_000068: ncbiprotein

position:884670:-1
position: 884670
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:884578-884670:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:883706-883818:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:883232-883299:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:882468-882560:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:882012-882072:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:881733-881778:-1:exon

TMEM50A
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 87175
gene: TMEM50A
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: transmembrane protein 50A isoform X2
translation: MSGFLESLRCSECVDWGEKRNTIASVAAGVLFFTGWWIIIDAAVKYPQVEDFNHSYHACGVIATIAFLMINAVSNGQVRGDSYSEGCLGQTGARIWLFLGFMMAFGSLIASMWILFGGYVVKEKPVVYPGIAVFFQNAFIFFGGLVFKFGRTEDLWQ
SIO_010081: TMEM50A
subclass of: SO_0000673
so part of: TMEM50A
location: complement(join(881733..881778,882012..882072,882468..882560,883232..883299,883706..883818,884578..884670))
location: region:881733-884670:-1
so has part: feature:884578-884670:-1:exon
so has part: feature:883706-883818:-1:exon
so has part: feature:883232-883299:-1:exon
so has part: feature:882468-882560:-1:exon
so has part: feature:882012-882072:-1:exon
so has part: feature:881733-881778:-1:exon

XP_030820429.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:884578-884670:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:883706-883818:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:883232-883299:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:882468-882560:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:882012-882072:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:881733-881778:-1:exon

RSRP1
type: Gene
subclass of: SO_0000704
RO_0002162: 87175
gene: RSRP1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 885252..889930
location: region:885252-889930:1
so has part: feature:885252-889930:1:exon
subclass of: SO_0000010

115912918
type: Gene
SIO_000068: ncbigene

position:885252:1
position: 885252
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:889930:1
position: 889930
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:885252-889930:1:exon

RSRP1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 87175
gene: RSRP1
product: arginine and serine rich protein 1
exception: unclassified transcription discrepancy
note: The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: inserted 2 bases in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 13 ESTs, 3 Proteins, and 97% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
transcript id: XM_030964717.1
SIO_010081: RSRP1
subclass of: SO_0000673
so part of: RSRP1
location: join(885252..885478,885611..885666,886806..887403,887715..887869,888929..889012,889415..889930)
location: region:885252-889930:1
so has part: feature:885252-885478:1:exon
so has part: feature:885611-885666:1:exon
so has part: feature:886806-887403:1:exon
so has part: feature:887715-887869:1:exon
so has part: feature:888929-889012:1:exon
so has part: feature:889415-889930:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:885252-885478:1:exon

position:885478:1
position: 885478
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:885611-885666:1:exon

position:885611:1
position: 885611
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:885666:1
position: 885666
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:886806-887403:1:exon

position:886806:1
position: 886806
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:887403:1
position: 887403
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:887715-887869:1:exon

position:887715:1
position: 887715
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:887869:1
position: 887869
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:888929-889012:1:exon

position:888929:1
position: 888929
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:889012:1
position: 889012
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:889415-889930:1:exon

position:889415:1
position: 889415
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

RSRP1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 87175
gene: RSRP1
exception: unclassified translation discrepancy
note: The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: inserted 2 bases in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: LOW QUALITY PROTEIN: arginine/serine-rich protein 1
translation: MGVTHEAGLSPQDPCGGSPAGWSRSAQVPQGNQRGACPAAPSGTETGHCRAAARPEAEADSTQKGSAGQTADMAEFMDDLRLGSPEHRDSPEHRDSRRSCSGSSRSSSRSSRSSSSSSSSGRSSRSWSRSRSRSRSRRRRSHRSRRRSRSYSRSRSRSRGSRRYRGRYRPRRYRHRYGRHRSRSWSRGRPCYRRSYSRSRSRSRXRRYYGFGRTVYPEAYRGWRSRSRTRSRSRSPLHLSEKDKRELLEIAKANAAKALGTDNIVLPASLKISAPAKEIKTEKQEREEATESAEQPGSAAEDVSKAGMERATIQRSISFSPNNTMAKPALQKPVSHTVVKEPVVSPAREDDRKGSPYGQWVPVKKEEKKTFLNFSPKSSLFRAR
SIO_010081: RSRP1
subclass of: SO_0000673
so part of: RSRP1
location: join(885408..885478,885611..885666,886806..887403,887715..887869,888929..889012,889415..889603)
location: region:885408-889603:1
so has part: feature:885408-885478:1:exon
so has part: feature:885611-885666:1:exon
so has part: feature:886806-887403:1:exon
so has part: feature:887715-887869:1:exon
so has part: feature:888929-889012:1:exon
so has part: feature:889415-889603:1:exon

XP_030820577.1
type: Protein
SIO_000068: ncbiprotein

position:885408:1
position: 885408
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:889603:1
position: 889603
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:885408-885478:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:885611-885666:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:886806-887403:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:887715-887869:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:888929-889012:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:889415-889603:1:exon

SYF2
type: Gene
subclass of: SO_0000704
RO_0002162: 87175
gene: SYF2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(890600..893334)
location: region:890600-893334:-1
so has part: feature:890600-893334:-1:exon
subclass of: SO_0000010

115912857
type: Gene
SIO_000068: ncbigene

position:890600:-1
position: 890600
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:893334:-1
position: 893334
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:890600-893334:-1:exon

SYF2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 87175
gene: SYF2
product: SYF2 pre-mRNA splicing factor
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 mRNAs, 2 ESTs, 7 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XM_030964636.1
SIO_010081: SYF2
subclass of: SO_0000673
so part of: SYF2
location: complement(join(890600..891030,891104..891202,891925..892015,892384..892501,892596..892721,893056..893169,893248..893334))
location: region:890600-893334:-1
so has part: feature:893248-893334:-1:exon
so has part: feature:893056-893169:-1:exon
so has part: feature:892596-892721:-1:exon
so has part: feature:892384-892501:-1:exon
so has part: feature:891925-892015:-1:exon
so has part: feature:891104-891202:-1:exon
so has part: feature:890600-891030:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:893248-893334:-1:exon

position:893248:-1
position: 893248
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:893056-893169:-1:exon

position:893056:-1
position: 893056
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:893169:-1
position: 893169
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:892596-892721:-1:exon

position:892596:-1
position: 892596
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:892721:-1
position: 892721
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:892384-892501:-1:exon

position:892384:-1
position: 892384
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:892501:-1
position: 892501
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:891925-892015:-1:exon

position:891925:-1
position: 891925
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:892015:-1
position: 892015
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:891104-891202:-1:exon

position:891104:-1
position: 891104
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:891202:-1
position: 891202
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:890600-891030:-1:exon

position:891030:-1
position: 891030
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

SYF2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 87175
gene: SYF2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: pre-mRNA-splicing factor SYF2
translation: MAAAVSALSSLGVPEADVGSEEEEEEEQAEPGPAAAAAAEQRREERLRRFRELHMKRYEACKLNSQEVVEEDKRLKLPPNWEAKKARLEWELQVQEKKKECAARGEDYERVKLLEVSAEDAERWERKKKKKNPDLGFSDYAAAQLRQYQRLTRQIKPDLEQYEKLKEQHGEALYPTSDSLLHGTHVPSKEGVDRMVADLEKQIEKREKYSRRRPYNDDADIDYINERNAKFNQKAERFYGKYTAEIKQNLERGTAV
SIO_010081: SYF2
subclass of: SO_0000673
so part of: SYF2
location: complement(join(890865..891030,891104..891202,891925..892015,892384..892501,892596..892721,893056..893169,893248..893304))
location: region:890865-893304:-1
so has part: feature:893248-893304:-1:exon
so has part: feature:893056-893169:-1:exon
so has part: feature:892596-892721:-1:exon
so has part: feature:892384-892501:-1:exon
so has part: feature:891925-892015:-1:exon
so has part: feature:891104-891202:-1:exon
so has part: feature:890865-891030:-1:exon

XP_030820496.1
type: Protein
SIO_000068: ncbiprotein

position:890865:-1
position: 890865
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:893304:-1
position: 893304
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:893248-893304:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:893056-893169:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:892596-892721:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:892384-892501:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:891925-892015:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:891104-891202:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:890865-891030:-1:exon

RUNX3
type: Gene
subclass of: SO_0000704
RO_0002162: 87175
gene: RUNX3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 926502..959933
location: region:926502-959933:1
so has part: feature:926502-959933:1:exon
subclass of: SO_0000010

115912849
type: Gene
SIO_000068: ncbigene

position:926502:1
position: 926502
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:959933:1
position: 959933
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:926502-959933:1:exon

RUNX3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 87175
gene: RUNX3
product: RUNX family transcription factor 3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 31 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_030964620.1
SIO_010081: RUNX3
subclass of: SO_0000673
so part of: RUNX3
location: join(926502..926774,927664..927820,932048..932152,946405..946569,957713..959933)
location: region:926502-959933:1
so has part: feature:926502-926774:1:exon
so has part: feature:927664-927820:1:exon
so has part: feature:932048-932152:1:exon
so has part: feature:946405-946569:1:exon
so has part: feature:957713-959933:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:926502-926774:1:exon

position:926774:1
position: 926774
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:927664-927820:1:exon

position:927664:1
position: 927664
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:927820:1
position: 927820
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:932048-932152:1:exon

position:932048:1
position: 932048
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:932152:1
position: 932152
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:946405-946569:1:exon

position:946405:1
position: 946405
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:946569:1
position: 946569
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:957713-959933:1:exon

position:957713:1
position: 957713
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

RUNX3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 87175
gene: RUNX3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: runt-related transcription factor 3
translation: MRIPVDPSTSRRFTPPSTAFPCGKMGENSGALGAPAPGARARPEVRSVVDVLADHAGELVRTDSPNFLCSVLPSHWRCNKTLPVAFKVVALGDVPDGTVVTVMAGNDENYSAELRNASAVMKNQVARFNDLRFVGRSGRGKSFTLTITVFTNPTQVATYHRAIKVTVDGPREPRRHRQKLEDQAKPFTDRYGELERLRQSMRVTPTTPNPRGSLSTPSHFGSQAQTPIQGTSELSPFSDPRQFERSFPTLPALTETRFSDPRMHYPGAMSAAFPYTATPSATGIGGISMTSMPTTTRFHHTYLPPPYPSSTQNQSGPFQANPSPYHLYYGTSSGSYQFSMVAGGERSPTRMLSSCTSASAGNNLMNASLGAQSDGVDADGSHSNSPTTMSTTGRMDESVWRPY
SIO_010081: RUNX3
subclass of: SO_0000673
so part of: RUNX3
location: join(926514..926774,927664..927820,932048..932152,946405..946569,957713..958236)
location: region:926514-958236:1
so has part: feature:926514-926774:1:exon
so has part: feature:927664-927820:1:exon
so has part: feature:932048-932152:1:exon
so has part: feature:946405-946569:1:exon
so has part: feature:957713-958236:1:exon

XP_030820480.1
type: Protein
SIO_000068: ncbiprotein

position:926514:1
position: 926514
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:958236:1
position: 958236
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:926514-926774:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:927664-927820:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:932048-932152:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:946405-946569:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:957713-958236:1:exon

CLIC4
type: Gene
subclass of: SO_0000704
RO_0002162: 87175
gene: CLIC4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(982132..1008111)
location: region:982132-1008111:-1
so has part: feature:982132-1008111:-1:exon
subclass of: SO_0000010

115912778
type: Gene
SIO_000068: ncbigene

position:982132:-1
position: 982132
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1008111:-1
position: 1008111
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:982132-1008111:-1:exon

CLIC4
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 87175
gene: CLIC4
product: chloride intracellular channel 4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 19 ESTs, 35 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
transcript id: XM_030964497.1
SIO_010081: CLIC4
subclass of: SO_0000673
so part of: CLIC4
location: complement(join(982132..986113,986837..987018,988184..988290,989086..989211,993821..993930,1007921..1008111))
location: region:982132-1008111:-1
so has part: feature:1007921-1008111:-1:exon
so has part: feature:993821-993930:-1:exon
so has part: feature:989086-989211:-1:exon
so has part: feature:988184-988290:-1:exon
so has part: feature:986837-987018:-1:exon
so has part: feature:982132-986113:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1007921-1008111:-1:exon

position:1007921:-1
position: 1007921
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:993821-993930:-1:exon

position:993821:-1
position: 993821
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:993930:-1
position: 993930
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:989086-989211:-1:exon

position:989086:-1
position: 989086
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:989211:-1
position: 989211
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:988184-988290:-1:exon

position:988184:-1
position: 988184
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:988290:-1
position: 988290
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:986837-987018:-1:exon

position:986837:-1
position: 986837
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:987018:-1
position: 987018
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:982132-986113:-1:exon

position:986113:-1
position: 986113
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

CLIC4
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 87175
gene: CLIC4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: chloride intracellular channel protein 4
translation: MALSVPVNGLKEGDKEPVIELFVKAGSDGESIGNCPFSQRLFMILWLKGVVFSVTTVDLKRKPADLQNLAPGTHPPFITYNGEVRTDVNKIEEFLEDVLAPPKYLKLSPKHPESNTAGMDIFAKFSAFIKNSRPEANEALERGLLKTLQKLDEYLNSPLPDEIDENSLEDVTVSTRKFLDGNEMTLADCNLLPKLHIVKVVAKKYRNFEIPKEMTGIWRYLTNAYSRDEFTNTCPGDKEIEIAYSDVAKRLTK
SIO_010081: CLIC4
subclass of: SO_0000673
so part of: CLIC4
location: complement(join(985949..986113,986837..987018,988184..988290,989086..989211,993821..993930,1007921..1007992))
location: region:985949-1007992:-1
so has part: feature:1007921-1007992:-1:exon
so has part: feature:993821-993930:-1:exon
so has part: feature:989086-989211:-1:exon
so has part: feature:988184-988290:-1:exon
so has part: feature:986837-987018:-1:exon
so has part: feature:985949-986113:-1:exon

XP_030820357.1
type: Protein
SIO_000068: ncbiprotein

position:985949:-1
position: 985949
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1007992:-1
position: 1007992
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1007921-1007992:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:993821-993930:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:989086-989211:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:988184-988290:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:986837-987018:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:985949-986113:-1:exon

SRRM1
type: Gene
subclass of: SO_0000704
RO_0002162: 87175
gene: SRRM1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1020295..1037182)
location: region:1020295-1037182:-1
so has part: feature:1020295-1037182:-1:exon
subclass of: SO_0000010

115912819
type: Gene
SIO_000068: ncbigene

position:1020295:-1
position: 1020295
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1037182:-1
position: 1037182
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1020295-1037182:-1:exon

SRRM1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 87175
gene: SRRM1
product: serine and arginine repetitive matrix 1
exception: unclassified transcription discrepancy
note: The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: inserted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 42 ESTs, 7 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_030964571.1
SIO_010081: SRRM1
subclass of: SO_0000673
so part of: SRRM1
location: complement(join(1020295..1021284,1021461..1021655,1022119..1022296,1023272..1023733,1024226..1024330,1025955..1025996,1026230..1026368,1026971..1027057,1027394..1027474,1027582..1027852,1029366..1029485,1030009..1030230,1030683..1030883,1031361..1031473,1031680..1031850,1033949..1034071,1034792..1034881,1037078..1037182))
location: region:1020295-1037182:-1
so has part: feature:1037078-1037182:-1:exon
so has part: feature:1034792-1034881:-1:exon
so has part: feature:1033949-1034071:-1:exon
so has part: feature:1031680-1031850:-1:exon
so has part: feature:1031361-1031473:-1:exon
so has part: feature:1030683-1030883:-1:exon
so has part: feature:1030009-1030230:-1:exon
so has part: feature:1029366-1029485:-1:exon
so has part: feature:1027582-1027852:-1:exon
so has part: feature:1027394-1027474:-1:exon
so has part: feature:1026971-1027057:-1:exon
so has part: feature:1026230-1026368:-1:exon
so has part: feature:1025955-1025996:-1:exon
so has part: feature:1024226-1024330:-1:exon
so has part: feature:1023272-1023733:-1:exon
so has part: feature:1022119-1022296:-1:exon
so has part: feature:1021461-1021655:-1:exon
so has part: feature:1020295-1021284:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1037078-1037182:-1:exon

position:1037078:-1
position: 1037078
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1034792-1034881:-1:exon

position:1034792:-1
position: 1034792
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1034881:-1
position: 1034881
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1033949-1034071:-1:exon

position:1033949:-1
position: 1033949
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1034071:-1
position: 1034071
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1031680-1031850:-1:exon

position:1031680:-1
position: 1031680
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1031850:-1
position: 1031850
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1031361-1031473:-1:exon

position:1031361:-1
position: 1031361
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1031473:-1
position: 1031473
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1030683-1030883:-1:exon

position:1030683:-1
position: 1030683
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1030883:-1
position: 1030883
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1030009-1030230:-1:exon

position:1030009:-1
position: 1030009
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1030230:-1
position: 1030230
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1029366-1029485:-1:exon

position:1029366:-1
position: 1029366
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1029485:-1
position: 1029485
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:1027582-1027852:-1:exon

position:1027582:-1
position: 1027582
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1027852:-1
position: 1027852
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:1027394-1027474:-1:exon

position:1027394:-1
position: 1027394
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1027474:-1
position: 1027474
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:1026971-1027057:-1:exon

position:1026971:-1
position: 1026971
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1027057:-1
position: 1027057
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:1026230-1026368:-1:exon

position:1026230:-1
position: 1026230
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1026368:-1
position: 1026368
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:1025955-1025996:-1:exon

position:1025955:-1
position: 1025955
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1025996:-1
position: 1025996
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:1024226-1024330:-1:exon

position:1024226:-1
position: 1024226
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1024330:-1
position: 1024330
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:1023272-1023733:-1:exon

position:1023272:-1
position: 1023272
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1023733:-1
position: 1023733
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:1022119-1022296:-1:exon

position:1022119:-1
position: 1022119
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1022296:-1
position: 1022296
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:1021461-1021655:-1:exon

position:1021461:-1
position: 1021461
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1021655:-1
position: 1021655
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:1020295-1021284:-1:exon

position:1021284:-1
position: 1021284
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

SRRM1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 87175
gene: SRRM1
exception: unclassified translation discrepancy
note: The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: inserted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: LOW QUALITY PROTEIN: serine/arginine repetitive matrix protein 1
translation: MDAGFFRGTSAEQDNRFSNKQKKLLKQLKFAECLEKKVDMSKVNLEVIKPWITKRVTEILGFEDDVVIEFIFNQLEVKNPDSKMMQINLTGFLNGKNAREFMGELWPLLLSAQENIAGIPTAFLELKKEEIKQRQIEQEKLASMKKQDEDKEKRDKEDKDNREKRDRSRSPRRRKSRSPSPRRRSSPVRRERKRSHSRSPHHRTKSRSATPAPEKKEATPEPEPSVKPKETVVQEAASNSDIPKAPKPEPPVLETKETSPERNSKKEREREREREKEKEKTRQRSPSRSKSRSRSRSRSPSHSRPRRRHRSRSRSYSPRRRPSPRRRPSPRRRSPPRRMPPPPRHRRSRSPVRRRRRSSASLSGSSSSSSSSRSRSPPKKPPKRPVSSPPRKTRRLSPSASPPRRRHRPSPPGSPPAKLRRSPXPQQSNRARKSRGSVSPSRASAPKHKSTEKRESPSPAPKPRKAELSESEEDKGGKMAAADSVQQRRQYRRQNQQSSSDSGSSSSSEEERPKRSNVKNGEVGRRHRHSHSRSPSPCKRQKDSSPRMQIEKRWQSPVMKSRRRRSPSPPPARRRRSPSPAPPPRRRRSPSPPRRRSPSPPPRRRSPSPRRYSPPIQRRYSPSPPPKRRTASPPPPPKRRASPSPQSKRRVSHSPPPKQRSSPTAKRRSPSVSSKHRKGSPPSRSNRETRSPPQNKRHSPSPRPRASHPSSSPPPPRRGASASPQRRQSPSPSSRPIRRVSRTPEPKKTKASTPSPRRVSSSRSASGSPETAPKKHQGPASPARSRSPSANWSPAKKAKSPTQSPSPARNSDQEGGGKKKKKKKDKKHKKDKKHKKHKKHKKEKAAAAAVTAAVAPADTTSAQGEQEAETEPKKETESEPEDNLDDLEKHLREKALRSMRKAQVSPPS
SIO_010081: SRRM1
subclass of: SO_0000673
so part of: SRRM1
location: complement(join(1021180..1021284,1021461..1021655,1022119..1022296,1023272..1023733,1024226..1024330,1025955..1025996,1026230..1026368,1026971..1027057,1027394..1027474,1027582..1027852,1029366..1029485,1030009..1030230,1030683..1030883,1031361..1031473,1031680..1031850,1033949..1034071,1034792..1034881,1037078..1037098))
location: region:1021180-1037098:-1
so has part: feature:1037078-1037098:-1:exon
so has part: feature:1034792-1034881:-1:exon
so has part: feature:1033949-1034071:-1:exon
so has part: feature:1031680-1031850:-1:exon
so has part: feature:1031361-1031473:-1:exon
so has part: feature:1030683-1030883:-1:exon
so has part: feature:1030009-1030230:-1:exon
so has part: feature:1029366-1029485:-1:exon
so has part: feature:1027582-1027852:-1:exon
so has part: feature:1027394-1027474:-1:exon
so has part: feature:1026971-1027057:-1:exon
so has part: feature:1026230-1026368:-1:exon
so has part: feature:1025955-1025996:-1:exon
so has part: feature:1024226-1024330:-1:exon
so has part: feature:1023272-1023733:-1:exon
so has part: feature:1022119-1022296:-1:exon
so has part: feature:1021461-1021655:-1:exon
so has part: feature:1021180-1021284:-1:exon