Camarhynchus parvulus chromosome 17, STF_HiC, whole genome shotgun sequence.
type: Entry
definition: Camarhynchus parvulus chromosome 17, STF_HiC, whole genome shotgun sequence.
sequence version: NC_044587.1
sequence date: 2019-09-26
sequence: sequence
division: CON
label: NC_044587.1
type: RefSeq
SIO_000068: refseq
dblink: PRJNA566393
dblink: SAMEA5603054
keyword: WGS
keyword: RefSeq
source: Camarhynchus parvulus
organism: Camarhynchus parvulus
taxonomy: Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Passeriformes; Thraupidae; Camarhynchus.
comment: REFSEQ INFORMATION: The reference sequence is identical to\nLR595715.1.\nAssembly name: STF_HiC\nThe genomic sequence for this RefSeq record is from the\nwhole-genome assembly released by the UPPSALA UNIVERISTY on\n2019/09/06. The original whole-genome shotgun project has the\naccession CABFNF000000000.1.\n\n##Genome-Annotation-Data-START##\nAnnotation Provider :: NCBI\nAnnotation Status :: Full annotation\nAnnotation Name :: Camarhynchus parvulus Annotation\n Release 100\nAnnotation Version :: 100\nAnnotation Pipeline :: NCBI eukaryotic genome annotation\n pipeline\nAnnotation Software Version :: 8.2\nAnnotation Method :: Best-placed RefSeq; Gnomon\nFeatures Annotated :: Gene; mRNA; CDS; ncRNA\n##Genome-Annotation-Data-END##

sequence
subclass of: SO_0000340
sequence length: 11493000
topology: linear
so has quality: SO_0000987
location: 1..11493000
location: region:1-11493000:1
RO_0002162: 87175

NC_044587
type: RefSeq
SIO_000068: refseq

PRJNA566393
type: BioProject
SIO_000068: bioproject

SAMEA5603054
type: BioSample
SIO_000068: biosample

position:1:1
position: 1
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:11493000:1
position: 11493000
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

feature:1-11493000:1:source
so part of: sequence
organism: Camarhynchus parvulus
mol type: genomic DNA
chromosome: 17

87175
type: Taxonomy
SIO_000068: taxonomy

GARNL3
type: Gene
subclass of: SO_0000704
RO_0002162: 87175
gene: GARNL3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 5005..36750
location: region:5005-36750:1
so has part: feature:5005-36750:1:exon
subclass of: SO_0000010

115910799
type: Gene
SIO_000068: ncbigene

position:5005:1
position: 5005
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:36750:1
position: 36750
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5005-36750:1:exon

GARNL3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 87175
gene: GARNL3
product: GTPase activating Rap/RanGAP domain like 3
exception: unclassified transcription discrepancy
note: The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: deleted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 16 ESTs, 7 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_030961240.1
SIO_010081: GARNL3
subclass of: SO_0000673
so part of: GARNL3
location: join(5005..5188,7328..7397,8713..8787,10077..10176,10633..10751,11374..11438,12054..12117,12389..12415,12811..12886,13480..13578,14136..14239,15402..15510,16738..16783,19170..19276,20089..20210,20889..20994,21766..21840,22753..22864,23605..23703,24624..24740,25420..25592,25902..26060,27921..27987,28631..28738,29127..29245,29472..29607,30642..30851,31158..31269,32041..36750)
location: region:5005-36750:1
so has part: feature:5005-5188:1:exon
so has part: feature:7328-7397:1:exon
so has part: feature:8713-8787:1:exon
so has part: feature:10077-10176:1:exon
so has part: feature:10633-10751:1:exon
so has part: feature:11374-11438:1:exon
so has part: feature:12054-12117:1:exon
so has part: feature:12389-12415:1:exon
so has part: feature:12811-12886:1:exon
so has part: feature:13480-13578:1:exon
so has part: feature:14136-14239:1:exon
so has part: feature:15402-15510:1:exon
so has part: feature:16738-16783:1:exon
so has part: feature:19170-19276:1:exon
so has part: feature:20089-20210:1:exon
so has part: feature:20889-20994:1:exon
so has part: feature:21766-21840:1:exon
so has part: feature:22753-22864:1:exon
so has part: feature:23605-23703:1:exon
so has part: feature:24624-24740:1:exon
so has part: feature:25420-25592:1:exon
so has part: feature:25902-26060:1:exon
so has part: feature:27921-27987:1:exon
so has part: feature:28631-28738:1:exon
so has part: feature:29127-29245:1:exon
so has part: feature:29472-29607:1:exon
so has part: feature:30642-30851:1:exon
so has part: feature:31158-31269:1:exon
so has part: feature:32041-36750:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:5005-5188:1:exon

position:5188:1
position: 5188
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:7328-7397:1:exon

position:7328:1
position: 7328
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7397:1
position: 7397
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:8713-8787:1:exon

position:8713:1
position: 8713
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:8787:1
position: 8787
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:10077-10176:1:exon

position:10077:1
position: 10077
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:10176:1
position: 10176
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:10633-10751:1:exon

position:10633:1
position: 10633
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:10751:1
position: 10751
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:11374-11438:1:exon

position:11374:1
position: 11374
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:11438:1
position: 11438
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:12054-12117:1:exon

position:12054:1
position: 12054
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:12117:1
position: 12117
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:12389-12415:1:exon

position:12389:1
position: 12389
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:12415:1
position: 12415
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:12811-12886:1:exon

position:12811:1
position: 12811
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:12886:1
position: 12886
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:13480-13578:1:exon

position:13480:1
position: 13480
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:13578:1
position: 13578
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:14136-14239:1:exon

position:14136:1
position: 14136
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:14239:1
position: 14239
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:15402-15510:1:exon

position:15402:1
position: 15402
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:15510:1
position: 15510
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:16738-16783:1:exon

position:16738:1
position: 16738
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:16783:1
position: 16783
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:19170-19276:1:exon

position:19170:1
position: 19170
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:19276:1
position: 19276
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:20089-20210:1:exon

position:20089:1
position: 20089
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:20210:1
position: 20210
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:20889-20994:1:exon

position:20889:1
position: 20889
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:20994:1
position: 20994
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:21766-21840:1:exon

position:21766:1
position: 21766
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:21840:1
position: 21840
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:22753-22864:1:exon

position:22753:1
position: 22753
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:22864:1
position: 22864
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:23605-23703:1:exon

position:23605:1
position: 23605
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:23703:1
position: 23703
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:24624-24740:1:exon

position:24624:1
position: 24624
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:24740:1
position: 24740
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:25420-25592:1:exon

position:25420:1
position: 25420
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:25592:1
position: 25592
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 22
SIO_000628: feature:25902-26060:1:exon

position:25902:1
position: 25902
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:26060:1
position: 26060
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 23
SIO_000628: feature:27921-27987:1:exon

position:27921:1
position: 27921
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:27987:1
position: 27987
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 24
SIO_000628: feature:28631-28738:1:exon

position:28631:1
position: 28631
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:28738:1
position: 28738
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 25
SIO_000628: feature:29127-29245:1:exon

position:29127:1
position: 29127
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:29245:1
position: 29245
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 26
SIO_000628: feature:29472-29607:1:exon

position:29472:1
position: 29472
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:29607:1
position: 29607
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 27
SIO_000628: feature:30642-30851:1:exon

position:30642:1
position: 30642
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:30851:1
position: 30851
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 28
SIO_000628: feature:31158-31269:1:exon

position:31158:1
position: 31158
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:31269:1
position: 31269
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 29
SIO_000628: feature:32041-36750:1:exon

position:32041:1
position: 32041
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

GARNL3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 87175
gene: GARNL3
exception: unclassified translation discrepancy
note: The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: deleted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: LOW QUALITY PROTEIN: GTPase-activating Rap/Ran-GAP domain-like protein 3
translation: MELSSAEGASARFLGLTQRSVSEDLGCRRGEFSRKHYGSVELLISSDADGAIQRAGRFRVENGSSGENTGYAPGTWHRTDVHLENPEYHTRWYLKYFLGKVHQNYVGTDAEKNPFFLSVVLSEQNNQRIPQYHSILWRKTGTQKICLPYSPTKTLSVKSILSAMSLDKFEKSPREIFHPEIQKDLLVLEEQEGSVNFKFGVLYAKDGQLTDDEMFSNETGSESFQRFLHLLGDTITLKGWSGYRGGLDTKNDTTGTCSIYTVFQGHEIMFHVSTMLPYSRENKQQVERKRHIGNDIVTIIFQEGEESSPAFKPSMIRSHFTHIFALVRYNKQNDSYRLKIFSEESVPLFGPPLPCPPVFTNHQEFRDFVLVKLINGEKATLETPTFSQKRQRTLDMLIRSLYQDMTPDLHKGNNVLNRRSFSDVFPEPPKSTRKQEEARQAEFVRLGQALKLKSTVKRDPTVNLASTSFCKKEPWESQSFCSNFPHEVVCADSWGQSLLVSTDAGILLIDDGQPSVQVFDKSLQIKQMNVLEALDLLIARTDKGKDSRILVFRLSAVQKDIETKKIIRNKYDCRENKLERTKGCHLYAINTHHGSELRIVAAIRNKLLLVTKKYSLDDTSISTSLLSSPESPVEEFQYIREICLSDPPVVMTLVDGPTGDSDNMICVAYRHQFDLINESTGESYRLHHVETNRVNFVAAIDVYEDGEAGLLLCYNYVCQYRKVYPFSGHSPLVQPSAYDFHFSWNQVPYAVVCAFPYVLAFTTDSIEIRLVVNGNLVHTAVVPELQLVASRSDIYFKATAAVSGSSESSSKEMSSKSSPQTPTAYEKPELPLPSLEGEVPCKNLYKIPLSNLVGRSIERPLKSPLAPKVITATPLSGITSLPVMHSLPLSRMEIKEIASRTRKELLGLLDEPIPKTESAQKLKKVYRRQSDPKQGAVRSTSSDRIISSSFEGYSERRHLSTSSDPDTSANREENSPSSYPFQLISLYDEDIIDLK
SIO_010081: GARNL3
subclass of: SO_0000673
so part of: GARNL3
location: join(5133..5188,7328..7397,8713..8787,10077..10176,10633..10751,11374..11438,12054..12117,12389..12415,12811..12886,13480..13578,14136..14239,15402..15510,16738..16783,19170..19276,20089..20210,20889..20994,21766..21840,22753..22864,23605..23703,24624..24740,25420..25592,25902..26060,27921..27987,28631..28738,29127..29245,29472..29607,30642..30851,31158..31269,32041..32197)
location: region:5133-32197:1
so has part: feature:5133-5188:1:exon
so has part: feature:7328-7397:1:exon
so has part: feature:8713-8787:1:exon
so has part: feature:10077-10176:1:exon
so has part: feature:10633-10751:1:exon
so has part: feature:11374-11438:1:exon
so has part: feature:12054-12117:1:exon
so has part: feature:12389-12415:1:exon
so has part: feature:12811-12886:1:exon
so has part: feature:13480-13578:1:exon
so has part: feature:14136-14239:1:exon
so has part: feature:15402-15510:1:exon
so has part: feature:16738-16783:1:exon
so has part: feature:19170-19276:1:exon
so has part: feature:20089-20210:1:exon
so has part: feature:20889-20994:1:exon
so has part: feature:21766-21840:1:exon
so has part: feature:22753-22864:1:exon
so has part: feature:23605-23703:1:exon
so has part: feature:24624-24740:1:exon
so has part: feature:25420-25592:1:exon
so has part: feature:25902-26060:1:exon
so has part: feature:27921-27987:1:exon
so has part: feature:28631-28738:1:exon
so has part: feature:29127-29245:1:exon
so has part: feature:29472-29607:1:exon
so has part: feature:30642-30851:1:exon
so has part: feature:31158-31269:1:exon
so has part: feature:32041-32197:1:exon

XP_030817100.1
type: Protein
SIO_000068: ncbiprotein

position:5133:1
position: 5133
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:32197:1
position: 32197
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5133-5188:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:7328-7397:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:8713-8787:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:10077-10176:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:10633-10751:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:11374-11438:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:12054-12117:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:12389-12415:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:12811-12886:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:13480-13578:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:14136-14239:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:15402-15510:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:16738-16783:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:19170-19276:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:20089-20210:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:20889-20994:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:21766-21840:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:22753-22864:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:23605-23703:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:24624-24740:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:25420-25592:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:25902-26060:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:27921-27987:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:28631-28738:1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:29127-29245:1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:29472-29607:1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:30642-30851:1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:31158-31269:1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:32041-32197:1:exon

FBXW2
type: Gene
subclass of: SO_0000704
RO_0002162: 87175
gene: FBXW2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 39748..52173
location: region:39748-52173:1
so has part: feature:39748-52173:1:exon
subclass of: SO_0000010

115911043
type: Gene
SIO_000068: ncbigene

position:39748:1
position: 39748
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:52173:1
position: 52173
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:39748-52173:1:exon

FBXW2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 87175
gene: FBXW2
product: F-box and WD repeat domain containing 2, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 16 ESTs, 16 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XM_030961722.1
SIO_010081: FBXW2
subclass of: SO_0000673
so part of: FBXW2
location: join(39748..39884,41336..41845,43082..43276,44060..44193,44800..44886,45509..45678,47130..52173)
location: region:39748-52173:1
so has part: feature:39748-39884:1:exon
so has part: feature:41336-41845:1:exon
so has part: feature:43082-43276:1:exon
so has part: feature:44060-44193:1:exon
so has part: feature:44800-44886:1:exon
so has part: feature:45509-45678:1:exon
so has part: feature:47130-52173:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:39748-39884:1:exon

position:39884:1
position: 39884
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:41336-41845:1:exon

position:41336:1
position: 41336
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:41845:1
position: 41845
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:43082-43276:1:exon

position:43082:1
position: 43082
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:43276:1
position: 43276
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:44060-44193:1:exon

position:44060:1
position: 44060
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:44193:1
position: 44193
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:44800-44886:1:exon

position:44800:1
position: 44800
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:44886:1
position: 44886
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:45509-45678:1:exon

position:45509:1
position: 45509
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:45678:1
position: 45678
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:47130-52173:1:exon

position:47130:1
position: 47130
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

FBXW2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 87175
gene: FBXW2
product: F-box and WD repeat domain containing 2, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 7 ESTs, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_030961723.1
SIO_010081: FBXW2
subclass of: SO_0000673
so part of: FBXW2
location: join(39748..39884,41336..41845,43082..43276,44060..44193,44800..44886,45509..45608,47130..52173)
location: region:39748-52173:1
so has part: feature:39748-39884:1:exon
so has part: feature:41336-41845:1:exon
so has part: feature:43082-43276:1:exon
so has part: feature:44060-44193:1:exon
so has part: feature:44800-44886:1:exon
so has part: feature:45509-45608:1:exon
so has part: feature:47130-52173:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:39748-39884:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:41336-41845:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:43082-43276:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:44060-44193:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:44800-44886:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:45509-45608:1:exon

position:45608:1
position: 45608
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:47130-52173:1:exon

FBXW2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 87175
gene: FBXW2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: F-box/WD repeat-containing protein 2 isoform X1
translation: MEKKDFEAWLDNISIAFLSLTDLQKNETLDHLISLSGAVQLRHLSNNLEILLKRDFLKLLPLELSFYLLKWLDPQTLLTCCLVSKQWNKVISACTEVWQTACKNLGWQIDDSVQDPLHWKKVYLKAILRMKQLKDHEAFETSSLIGHSARVYALYYKDGLLCTGSDDLSAKLWDVSTGQCIYGIQTHTCAAVKFDEQKLVTGSFDNTVACWEWSSGAKTQHFRGHTGAVFSVDYNDELDILVSGSADFTVKVWALSTGTCLNTLTGHTEWVTKVVLQKCKVKSLMHSPGDYILLSADKYEIKIWPIGREINCKCLRTLSVSEDRSISLQPRLHFDGKYIVCSSALGLYQWDFASYDILRVIKPPDFSNVSLLGFGEIFALLFDNRYLYIMDLRTEKLISRWPLPEYRKSKRGSSFLAGEMSWLNGLNGQNDTGLVFATSMPDHSIHLVLWKEHG
SIO_010081: FBXW2
subclass of: SO_0000673
so part of: FBXW2
location: join(41356..41845,43082..43276,44060..44193,44800..44886,45509..45678,47130..47418)
location: region:41356-47418:1
so has part: feature:41356-41845:1:exon
so has part: feature:43082-43276:1:exon
so has part: feature:44060-44193:1:exon
so has part: feature:44800-44886:1:exon
so has part: feature:45509-45678:1:exon
so has part: feature:47130-47418:1:exon

XP_030817582.1
type: Protein
SIO_000068: ncbiprotein

position:41356:1
position: 41356
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:47418:1
position: 47418
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:41356-41845:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:43082-43276:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:44060-44193:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:44800-44886:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:45509-45678:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:47130-47418:1:exon

FBXW2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 87175
gene: FBXW2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: F-box/WD repeat-containing protein 2 isoform X2
translation: MEKKDFEAWLDNISIAFLSLTDLQKNETLDHLISLSGAVQLRHLSNNLEILLKRDFLKLLPLELSFYLLKWLDPQTLLTCCLVSKQWNKVISACTEVWQTACKNLGWQIDDSVQDPLHWKKVYLKAILRMKQLKDHEAFETSSLIGHSARVYALYYKDGLLCTGSDDLSAKLWDVSTGQCIYGIQTHTCAAVKFDEQKLVTGSFDNTVACWEWSSGAKTQHFRGHTGAVFSVDYNDELDILVSGSADFTVKVWALSTGTCLNTLTGHTEWVTKVVLQKCKVKSLMHSPGDYILLSADKYEIKIWPIGREINCKCLRTLSVSEDRSISLQPRLHFDGLSNLQTSQMYHCWALERYLLYCLTTDTCT
SIO_010081: FBXW2
subclass of: SO_0000673
so part of: FBXW2
location: join(41356..41845,43082..43276,44060..44193,44800..44886,45509..45608,47130..47221)
location: region:41356-47221:1
so has part: feature:41356-41845:1:exon
so has part: feature:43082-43276:1:exon
so has part: feature:44060-44193:1:exon
so has part: feature:44800-44886:1:exon
so has part: feature:45509-45608:1:exon
so has part: feature:47130-47221:1:exon

XP_030817583.1
type: Protein
SIO_000068: ncbiprotein

position:47221:1
position: 47221
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:41356-41845:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:43082-43276:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:44060-44193:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:44800-44886:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:45509-45608:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:47130-47221:1:exon

LOC115911042
type: Gene
subclass of: SO_0000704
RO_0002162: 87175
gene: LOC115911042
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(50387..58027)
location: region:50387-58027:-1
so has part: feature:50387-58027:-1:exon
subclass of: SO_0000010

115911042
type: Gene
SIO_000068: ncbigene

position:50387:-1
position: 50387
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:58027:-1
position: 58027
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:50387-58027:-1:exon

LOC115911042
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 87175
gene: LOC115911042
product: uncharacterized LOC115911042, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 mRNAs, 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_030961719.1
SIO_010081: LOC115911042
subclass of: SO_0000673
so part of: LOC115911042
location: complement(join(50387..51913,57902..58027))
location: region:50387-58027:-1
so has part: feature:57902-58027:-1:exon
so has part: feature:50387-51913:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:57902-58027:-1:exon

position:57902:-1
position: 57902
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:50387-51913:-1:exon

position:51913:-1
position: 51913
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC115911042
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 87175
gene: LOC115911042
product: uncharacterized LOC115911042, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 mRNAs, 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_030961718.1
SIO_010081: LOC115911042
subclass of: SO_0000673
so part of: LOC115911042
location: complement(join(50387..51913,54570..54624,57902..57947))
location: region:50387-57947:-1
so has part: feature:57902-57947:-1:exon
so has part: feature:54570-54624:-1:exon
so has part: feature:50387-51913:-1:exon

position:57947:-1
position: 57947
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:57902-57947:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:54570-54624:-1:exon

position:54570:-1
position: 54570
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:54624:-1
position: 54624
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:50387-51913:-1:exon

LOC115911042
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 87175
gene: LOC115911042
product: uncharacterized LOC115911042, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 mRNAs, 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_030961721.1
SIO_010081: LOC115911042
subclass of: SO_0000673
so part of: LOC115911042
location: complement(join(50387..51913,53921..54043))
location: region:50387-54043:-1
so has part: feature:53921-54043:-1:exon
so has part: feature:50387-51913:-1:exon

position:54043:-1
position: 54043
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:53921-54043:-1:exon

position:53921:-1
position: 53921
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:50387-51913:-1:exon

LOC115911042
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 87175
gene: LOC115911042
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: uncharacterized protein LOC115911042 isoform X1
translation: MSYVAETMNFTHQIIRQHKLQGQRNLHGHLDPFKMLCAGKKSYFAAAVCIMTITSMLAVSYLKLQSLSHQPRVIQEGRRCRGKIAISTITALEGNKTFIISPYFDDRESKVTRLIGIVHHEDVKQLYCWFCCQANGKIYVSKAKIDVHSDRFGFPYGAADIVCLEPKNCDPTHVSVHQSPYVNTDQLLRFEIKNRKHETFSVDFTVCISAMFGNYNNVLQFIQSMEMYKILGVQKVVIYKNNCSHLMEKVLKFYIEEGTVEVIPWPINSHLRVSSAWRFMQDGTHIGYYGQITALNDCIYRNMERSKFVVLIDADEIILPLKHPNWKTMMNSLQEQNPGTSVFLFENHIFPETISSHTFNISSWNTVPGVNILQHVYREPDLKNVMNPRKMIVDPRKVVQTSVHSVLRAYGKSVYVPMDVALIYHCRKALQRNLPRESLIRDTTLWRYNLSLIMNVNKVLSQTMLQTQN
SIO_010081: LOC115911042
subclass of: SO_0000673
so part of: LOC115911042
location: complement(join(50546..51913,54570..54611))
location: region:50546-54611:-1
so has part: feature:54570-54611:-1:exon
so has part: feature:50546-51913:-1:exon

XP_030817578.1
type: Protein
SIO_000068: ncbiprotein

position:50546:-1
position: 50546
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:54611:-1
position: 54611
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:54570-54611:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:50546-51913:-1:exon

LOC115911042
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 87175
gene: LOC115911042
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: uncharacterized protein LOC115911042 isoform X2
translation: MLCAGKKSYFAAAVCIMTITSMLAVSYLKLQSLSHQPRVIQEGRRCRGKIAISTITALEGNKTFIISPYFDDRESKVTRLIGIVHHEDVKQLYCWFCCQANGKIYVSKAKIDVHSDRFGFPYGAADIVCLEPKNCDPTHVSVHQSPYVNTDQLLRFEIKNRKHETFSVDFTVCISAMFGNYNNVLQFIQSMEMYKILGVQKVVIYKNNCSHLMEKVLKFYIEEGTVEVIPWPINSHLRVSSAWRFMQDGTHIGYYGQITALNDCIYRNMERSKFVVLIDADEIILPLKHPNWKTMMNSLQEQNPGTSVFLFENHIFPETISSHTFNISSWNTVPGVNILQHVYREPDLKNVMNPRKMIVDPRKVVQTSVHSVLRAYGKSVYVPMDVALIYHCRKALQRNLPRESLIRDTTLWRYNLSLIMNVNKVLSQTMLQTQN
SIO_010081: LOC115911042
subclass of: SO_0000673
so part of: LOC115911042
location: complement(50546..51853)
location: region:50546-51853:-1
so has part: feature:50546-51853:-1:exon

XP_030817579.1
type: Protein
SIO_000068: ncbiprotein

position:51853:-1
position: 51853
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:50546-51853:-1:exon

LOC115911042
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 87175
gene: LOC115911042
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: uncharacterized protein LOC115911042 isoform X2
translation: MLCAGKKSYFAAAVCIMTITSMLAVSYLKLQSLSHQPRVIQEGRRCRGKIAISTITALEGNKTFIISPYFDDRESKVTRLIGIVHHEDVKQLYCWFCCQANGKIYVSKAKIDVHSDRFGFPYGAADIVCLEPKNCDPTHVSVHQSPYVNTDQLLRFEIKNRKHETFSVDFTVCISAMFGNYNNVLQFIQSMEMYKILGVQKVVIYKNNCSHLMEKVLKFYIEEGTVEVIPWPINSHLRVSSAWRFMQDGTHIGYYGQITALNDCIYRNMERSKFVVLIDADEIILPLKHPNWKTMMNSLQEQNPGTSVFLFENHIFPETISSHTFNISSWNTVPGVNILQHVYREPDLKNVMNPRKMIVDPRKVVQTSVHSVLRAYGKSVYVPMDVALIYHCRKALQRNLPRESLIRDTTLWRYNLSLIMNVNKVLSQTMLQTQN
SIO_010081: LOC115911042
subclass of: SO_0000673
so part of: LOC115911042
location: complement(50546..51853)
location: region:50546-51853:-1
so has part: feature:50546-51853:-1:exon

XP_030817581.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:50546-51853:-1:exon

RALGPS1
type: Gene
subclass of: SO_0000704
RO_0002162: 87175
gene: RALGPS1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(59012..134245)
location: region:59012-134245:-1
so has part: feature:59012-134245:-1:exon
subclass of: SO_0000010

115911039
type: Gene
SIO_000068: ncbigene

position:59012:-1
position: 59012
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:134245:-1
position: 134245
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:59012-134245:-1:exon

RALGPS1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 87175
gene: RALGPS1
product: Ral GEF with PH domain and SH3 binding motif 1, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_030961709.1
SIO_010081: RALGPS1
subclass of: SO_0000673
so part of: RALGPS1
location: complement(join(59012..59282,59362..59443,63740..63831,65183..65288,65463..65555,66611..66716,67614..67694,67950..68001,69197..69348,69905..70031,82188..82255,87580..87673,89340..89477,118873..118999,120836..120928,122536..122625,123119..123202,126066..126116,126490..126597,126972..127087,131688..131804,134128..134245))
location: region:59012-134245:-1
so has part: feature:134128-134245:-1:exon
so has part: feature:131688-131804:-1:exon
so has part: feature:126972-127087:-1:exon
so has part: feature:126490-126597:-1:exon
so has part: feature:126066-126116:-1:exon
so has part: feature:123119-123202:-1:exon
so has part: feature:122536-122625:-1:exon
so has part: feature:120836-120928:-1:exon
so has part: feature:118873-118999:-1:exon
so has part: feature:89340-89477:-1:exon
so has part: feature:87580-87673:-1:exon
so has part: feature:82188-82255:-1:exon
so has part: feature:69905-70031:-1:exon
so has part: feature:69197-69348:-1:exon
so has part: feature:67950-68001:-1:exon
so has part: feature:67614-67694:-1:exon
so has part: feature:66611-66716:-1:exon
so has part: feature:65463-65555:-1:exon
so has part: feature:65183-65288:-1:exon
so has part: feature:63740-63831:-1:exon
so has part: feature:59362-59443:-1:exon
so has part: feature:59012-59282:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:134128-134245:-1:exon

position:134128:-1
position: 134128
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:131688-131804:-1:exon

position:131688:-1
position: 131688
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:131804:-1
position: 131804
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:126972-127087:-1:exon

position:126972:-1
position: 126972
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:127087:-1
position: 127087
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:126490-126597:-1:exon

position:126490:-1
position: 126490
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:126597:-1
position: 126597
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:126066-126116:-1:exon

position:126066:-1
position: 126066
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:126116:-1
position: 126116
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:123119-123202:-1:exon

position:123119:-1
position: 123119
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:123202:-1
position: 123202
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:122536-122625:-1:exon

position:122536:-1
position: 122536
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:122625:-1
position: 122625
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:120836-120928:-1:exon

position:120836:-1
position: 120836
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:120928:-1
position: 120928
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:118873-118999:-1:exon

position:118873:-1
position: 118873
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:118999:-1
position: 118999
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:89340-89477:-1:exon

position:89340:-1
position: 89340
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:89477:-1
position: 89477
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:87580-87673:-1:exon

position:87580:-1
position: 87580
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:87673:-1
position: 87673
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:82188-82255:-1:exon

position:82188:-1
position: 82188
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:82255:-1
position: 82255
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:69905-70031:-1:exon

position:69905:-1
position: 69905
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:70031:-1
position: 70031
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:69197-69348:-1:exon

position:69197:-1
position: 69197
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:69348:-1
position: 69348
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:67950-68001:-1:exon

position:67950:-1
position: 67950
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:68001:-1
position: 68001
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:67614-67694:-1:exon

position:67614:-1
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reference: sequence
type: ReverseStrandPosition
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position:67694:-1
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urn:…
SIO_000300: 17
SIO_000628: feature:66611-66716:-1:exon

position:66611:-1
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reference: sequence
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position:66716:-1
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urn:…
SIO_000300: 18
SIO_000628: feature:65463-65555:-1:exon

position:65463:-1
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type: ReverseStrandPosition
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position:65555:-1
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urn:…
SIO_000300: 19
SIO_000628: feature:65183-65288:-1:exon

position:65183:-1
position: 65183
reference: sequence
type: ReverseStrandPosition
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position:65288:-1
position: 65288
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urn:…
SIO_000300: 20
SIO_000628: feature:63740-63831:-1:exon

position:63740:-1
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reference: sequence
type: ReverseStrandPosition
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position:63831:-1
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urn:…
SIO_000300: 21
SIO_000628: feature:59362-59443:-1:exon

position:59362:-1
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reference: sequence
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position:59443:-1
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reference: sequence
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urn:…
SIO_000300: 22
SIO_000628: feature:59012-59282:-1:exon

position:59282:-1
position: 59282
reference: sequence
type: ReverseStrandPosition
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RALGPS1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 87175
gene: RALGPS1
product: Ral GEF with PH domain and SH3 binding motif 1, transcript variant X5
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_030961711.1
SIO_010081: RALGPS1
subclass of: SO_0000673
so part of: RALGPS1
location: complement(join(59012..59282,59362..59443,63740..63831,65183..65288,65463..65555,66611..66716,67950..68001,69197..69348,69905..70031,82188..82255,87580..87673,89340..89477,118873..118999,120836..120928,122536..122625,123119..123202,126066..126116,126490..126597,126972..127087,128872..129059,131688..131804,134128..134245))
location: region:59012-134245:-1
so has part: feature:134128-134245:-1:exon
so has part: feature:131688-131804:-1:exon
so has part: feature:128872-129059:-1:exon
so has part: feature:126972-127087:-1:exon
so has part: feature:126490-126597:-1:exon
so has part: feature:126066-126116:-1:exon
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so has part: feature:122536-122625:-1:exon
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so has part: feature:89340-89477:-1:exon
so has part: feature:87580-87673:-1:exon
so has part: feature:82188-82255:-1:exon
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so has part: feature:67950-68001:-1:exon
so has part: feature:66611-66716:-1:exon
so has part: feature:65463-65555:-1:exon
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so has part: feature:63740-63831:-1:exon
so has part: feature:59362-59443:-1:exon
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urn:…
SIO_000300: 1
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urn:…
SIO_000300: 2
SIO_000628: feature:131688-131804:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:128872-129059:-1:exon

position:128872:-1
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reference: sequence
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position:129059:-1
position: 129059
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
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urn:…
SIO_000300: 5
SIO_000628: feature:126490-126597:-1:exon

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SIO_000300: 6
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SIO_000300: 7
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SIO_000300: 8
SIO_000628: feature:122536-122625:-1:exon

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SIO_000300: 9
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SIO_000300: 10
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SIO_000300: 11
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SIO_000300: 12
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SIO_000300: 13
SIO_000628: feature:82188-82255:-1:exon

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SIO_000300: 14
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urn:…
SIO_000300: 15
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urn:…
SIO_000300: 16
SIO_000628: feature:67950-68001:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:66611-66716:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:65463-65555:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:65183-65288:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:63740-63831:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:59362-59443:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:59012-59282:-1:exon

RALGPS1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 87175
gene: RALGPS1
product: Ral GEF with PH domain and SH3 binding motif 1, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_030961707.1
SIO_010081: RALGPS1
subclass of: SO_0000673
so part of: RALGPS1
location: complement(join(59012..59282,59362..59443,63740..63831,65183..65288,65463..65555,66611..66716,67614..67694,67950..68001,69197..69348,69905..70031,82188..82255,87580..87673,89340..89477,118873..118999,120836..120928,122536..122625,123119..123202,126066..126116,126490..126597,126972..127087,128872..129059,131688..131804,134128..134245))
location: region:59012-134245:-1
so has part: feature:134128-134245:-1:exon
so has part: feature:131688-131804:-1:exon
so has part: feature:128872-129059:-1:exon
so has part: feature:126972-127087:-1:exon
so has part: feature:126490-126597:-1:exon
so has part: feature:126066-126116:-1:exon
so has part: feature:123119-123202:-1:exon
so has part: feature:122536-122625:-1:exon
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so has part: feature:67950-68001:-1:exon
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so has part: feature:63740-63831:-1:exon
so has part: feature:59362-59443:-1:exon
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urn:…
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SIO_000300: 5
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SIO_000300: 6
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SIO_000300: 7
SIO_000628: feature:123119-123202:-1:exon

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SIO_000300: 8
SIO_000628: feature:122536-122625:-1:exon

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SIO_000300: 9
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SIO_000300: 10
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SIO_000300: 13
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SIO_000300: 14
SIO_000628: feature:69905-70031:-1:exon

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SIO_000300: 15
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urn:…
SIO_000300: 16
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urn:…
SIO_000300: 17
SIO_000628: feature:67614-67694:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:66611-66716:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:65463-65555:-1:exon

urn:…
SIO_000300: 20
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urn:…
SIO_000300: 21
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urn:…
SIO_000300: 22
SIO_000628: feature:59362-59443:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:59012-59282:-1:exon

RALGPS1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 87175
gene: RALGPS1
product: Ral GEF with PH domain and SH3 binding motif 1, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_030961708.1
SIO_010081: RALGPS1
subclass of: SO_0000673
so part of: RALGPS1
location: complement(join(59012..59282,59362..59443,63740..63831,65183..65288,65463..65555,66611..66716,67614..67694,67950..68001,69197..69348,69905..70031,82188..82255,87580..87673,89340..89477,118873..118999,120836..120928,122536..122625,123119..123202,126066..126116,126490..126597,126972..127087,128872..129059,131688..131804,134090..134234))
location: region:59012-134234:-1
so has part: feature:134090-134234:-1:exon
so has part: feature:131688-131804:-1:exon
so has part: feature:128872-129059:-1:exon
so has part: feature:126972-127087:-1:exon
so has part: feature:126490-126597:-1:exon
so has part: feature:126066-126116:-1:exon
so has part: feature:123119-123202:-1:exon
so has part: feature:122536-122625:-1:exon
so has part: feature:120836-120928:-1:exon
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so has part: feature:87580-87673:-1:exon
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so has part: feature:63740-63831:-1:exon
so has part: feature:59362-59443:-1:exon
so has part: feature:59012-59282:-1:exon

position:134234:-1
position: 134234
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:134090-134234:-1:exon

position:134090:-1
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reference: sequence
type: ReverseStrandPosition
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urn:…
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urn:…
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urn:…
SIO_000300: 23
SIO_000628: feature:59012-59282:-1:exon

RALGPS1
type: Miscellaneous RNA
subclass of: SO_0000673
RO_0002162: 87175
gene: RALGPS1
product: Ral GEF with PH domain and SH3 binding motif 1, transcript variant X10
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, 6 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XR_004061230.1
SIO_010081: RALGPS1
so part of: RALGPS1
location: complement(join(59266..59282,59362..59443,63740..63831,65463..65555,66611..66716,67614..67694,67950..68001,69197..69348,69905..70031,82188..82255,87580..87673,89340..89477,118873..118999,120836..120928,122536..122625,123119..123202,126066..126116,126490..126597,126972..127087,128872..129059,131688..131804,134128..134245))
location: region:59266-134245:-1
so has part: feature:134128-134245:-1:exon
so has part: feature:131688-131804:-1:exon
so has part: feature:128872-129059:-1:exon
so has part: feature:126972-127087:-1:exon
so has part: feature:126490-126597:-1:exon
so has part: feature:126066-126116:-1:exon
so has part: feature:123119-123202:-1:exon
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so has part: feature:120836-120928:-1:exon
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so has part: feature:67614-67694:-1:exon
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so has part: feature:63740-63831:-1:exon
so has part: feature:59362-59443:-1:exon
so has part: feature:59266-59282:-1:exon

position:59266:-1
position: 59266
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:134128-134245:-1:exon

urn:…
SIO_000300: 2
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SIO_000300: 4
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SIO_000300: 5
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SIO_000300: 6
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SIO_000628: feature:123119-123202:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:122536-122625:-1:exon

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SIO_000300: 10
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SIO_000300: 13
SIO_000628: feature:82188-82255:-1:exon

urn:…
SIO_000300: 14
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urn:…
SIO_000300: 15
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urn:…
SIO_000300: 16
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urn:…
SIO_000300: 17
SIO_000628: feature:67614-67694:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:66611-66716:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:65463-65555:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:63740-63831:-1:exon

urn:…
SIO_000300: 21
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urn:…
SIO_000300: 22
SIO_000628: feature:59266-59282:-1:exon

RALGPS1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 87175
gene: RALGPS1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: ras-specific guanine nucleotide-releasing factor RalGPS1 isoform X3
translation: MYKRNDFMASVMVTSATPEGSSSSDSLEGRSSDYANKSYDAVVFDVLKVTPEEFASQITLMDMPVFKAIQPEELASCGWNKREKHTLAPNIVAFTRRFNQVSFWVVREILTAQTLKIRAEILSHFVKIAKKLLELNNLHSLMSVVSALQSAPIFRLTKTWALLNRKDKTTFEKLDYLLSKEDNYKRTREYIRSLKMVPTIPYLGIYLLDLIYIDSAYPASDSIMENEQRSNQMNNILRIIADLQVSCNYDYLTTLPHVQKYLKSVRYIEELQKFVEDDNYKLSLRIEPGNSSPRLVSSKEDIAGPSDMSVVMKFSRRPTCPDASVAASLPTPPVPRHRKSHSLGNNMMCQLSVVESKSATFPTERPRHLLDDSVLECHSPARGHTPSARLANGLSIDSSESSEFSEDLPSGLESPTGACSCTAGGPTGVITMEGPLRRKTLLKEGKKPTLSSWTRYWVMLSGSTLLYFGAKALRGTERKHYKSTPGKKVSIAGWMVALPDDPEHPDIFQLNNPDKGNVYKFQTGSRFHAILWHKHLDDACKSNKPQETGVTYLLSRIHPFGDTQLWL
SIO_010081: RALGPS1
subclass of: SO_0000673
so part of: RALGPS1
location: complement(join(59378..59443,63740..63831,65183..65288,65463..65555,66611..66716,67950..68001,69197..69348,69905..70031,82188..82255,87580..87673,89340..89477,118873..118999,120836..120928,122536..122625,123119..123202,126066..126116,126490..126597,126972..127028))
location: region:59378-127028:-1
so has part: feature:126972-127028:-1:exon
so has part: feature:126490-126597:-1:exon
so has part: feature:126066-126116:-1:exon
so has part: feature:123119-123202:-1:exon
so has part: feature:122536-122625:-1:exon
so has part: feature:120836-120928:-1:exon
so has part: feature:118873-118999:-1:exon
so has part: feature:89340-89477:-1:exon
so has part: feature:87580-87673:-1:exon
so has part: feature:82188-82255:-1:exon
so has part: feature:69905-70031:-1:exon
so has part: feature:69197-69348:-1:exon
so has part: feature:67950-68001:-1:exon
so has part: feature:66611-66716:-1:exon
so has part: feature:65463-65555:-1:exon
so has part: feature:65183-65288:-1:exon
so has part: feature:63740-63831:-1:exon
so has part: feature:59378-59443:-1:exon

XP_030817571.1
type: Protein
SIO_000068: ncbiprotein

position:59378:-1
position: 59378
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:127028:-1
position: 127028
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:126972-127028:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:126490-126597:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:126066-126116:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:123119-123202:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:122536-122625:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:120836-120928:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:118873-118999:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:89340-89477:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:87580-87673:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:82188-82255:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:69905-70031:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:69197-69348:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:67950-68001:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:66611-66716:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:65463-65555:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:65183-65288:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:63740-63831:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:59378-59443:-1:exon

RALGPS1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 87175
gene: RALGPS1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: ras-specific guanine nucleotide-releasing factor RalGPS1 isoform X1
translation: MYKRNDFMASVMVTSATPEGSSSSDSLEGRSSDYANKSYDAVVFDVLKVTPEEFASQITLMDMPVFKAIQPEELASCGWNKREKHTLAPNIVAFTRRFNQVSFWVVREILTAQTLKIRAEILSHFVKIAKKLLELNNLHSLMSVVSALQSAPIFRLTKTWALLNRKDKTTFEKLDYLLSKEDNYKRTREYIRSLKMVPTIPYLGIYLLDLIYIDSAYPASDSIMENEQRSNQMNNILRIIADLQVSCNYDYLTTLPHVQKYLKSVRYIEELQKFVEDDNYKLSLRIEPGNSSPRLVSSKEDIAGPSDMSVVMKFSRRPTCPDASVAASLPTPPVPRHRKSHSLGNNMMCQLSVVESKSATFPTERPRHLLDDSVLECHSPARGHTPSARLANGLSIDSSESSEFSEDLPSGLERGRLYATLGPNWRVPLRNSPRSRSCVYSPTGACSCTAGGPTGVITMEGPLRRKTLLKEGKKPTLSSWTRYWVMLSGSTLLYFGAKALRGTERKHYKSTPGKKVSIAGWMVALPDDPEHPDIFQLNNPDKGNVYKFQTGSRFHAILWHKHLDDACKSNKPQETGVTYLLSRIHPFGDTQLWL
SIO_010081: RALGPS1
subclass of: SO_0000673
so part of: RALGPS1
location: complement(join(59378..59443,63740..63831,65183..65288,65463..65555,66611..66716,67614..67694,67950..68001,69197..69348,69905..70031,82188..82255,87580..87673,89340..89477,118873..118999,120836..120928,122536..122625,123119..123202,126066..126116,126490..126597,126972..127028))
location: region:59378-127028:-1
so has part: feature:126972-127028:-1:exon
so has part: feature:126490-126597:-1:exon
so has part: feature:126066-126116:-1:exon
so has part: feature:123119-123202:-1:exon
so has part: feature:122536-122625:-1:exon
so has part: feature:120836-120928:-1:exon
so has part: feature:118873-118999:-1:exon
so has part: feature:89340-89477:-1:exon
so has part: feature:87580-87673:-1:exon
so has part: feature:82188-82255:-1:exon
so has part: feature:69905-70031:-1:exon
so has part: feature:69197-69348:-1:exon
so has part: feature:67950-68001:-1:exon
so has part: feature:67614-67694:-1:exon
so has part: feature:66611-66716:-1:exon
so has part: feature:65463-65555:-1:exon
so has part: feature:65183-65288:-1:exon
so has part: feature:63740-63831:-1:exon
so has part: feature:59378-59443:-1:exon

XP_030817567.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:126972-127028:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:126490-126597:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:126066-126116:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:123119-123202:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:122536-122625:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:120836-120928:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:118873-118999:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:89340-89477:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:87580-87673:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:82188-82255:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:69905-70031:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:69197-69348:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:67950-68001:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:67614-67694:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:66611-66716:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:65463-65555:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:65183-65288:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:63740-63831:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:59378-59443:-1:exon

RALGPS1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 87175
gene: RALGPS1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: ras-specific guanine nucleotide-releasing factor RalGPS1 isoform X1
translation: MYKRNDFMASVMVTSATPEGSSSSDSLEGRSSDYANKSYDAVVFDVLKVTPEEFASQITLMDMPVFKAIQPEELASCGWNKREKHTLAPNIVAFTRRFNQVSFWVVREILTAQTLKIRAEILSHFVKIAKKLLELNNLHSLMSVVSALQSAPIFRLTKTWALLNRKDKTTFEKLDYLLSKEDNYKRTREYIRSLKMVPTIPYLGIYLLDLIYIDSAYPASDSIMENEQRSNQMNNILRIIADLQVSCNYDYLTTLPHVQKYLKSVRYIEELQKFVEDDNYKLSLRIEPGNSSPRLVSSKEDIAGPSDMSVVMKFSRRPTCPDASVAASLPTPPVPRHRKSHSLGNNMMCQLSVVESKSATFPTERPRHLLDDSVLECHSPARGHTPSARLANGLSIDSSESSEFSEDLPSGLERGRLYATLGPNWRVPLRNSPRSRSCVYSPTGACSCTAGGPTGVITMEGPLRRKTLLKEGKKPTLSSWTRYWVMLSGSTLLYFGAKALRGTERKHYKSTPGKKVSIAGWMVALPDDPEHPDIFQLNNPDKGNVYKFQTGSRFHAILWHKHLDDACKSNKPQETGVTYLLSRIHPFGDTQLWL
SIO_010081: RALGPS1
subclass of: SO_0000673
so part of: RALGPS1
location: complement(join(59378..59443,63740..63831,65183..65288,65463..65555,66611..66716,67614..67694,67950..68001,69197..69348,69905..70031,82188..82255,87580..87673,89340..89477,118873..118999,120836..120928,122536..122625,123119..123202,126066..126116,126490..126597,126972..127028))
location: region:59378-127028:-1
so has part: feature:126972-127028:-1:exon
so has part: feature:126490-126597:-1:exon
so has part: feature:126066-126116:-1:exon
so has part: feature:123119-123202:-1:exon
so has part: feature:122536-122625:-1:exon
so has part: feature:120836-120928:-1:exon
so has part: feature:118873-118999:-1:exon
so has part: feature:89340-89477:-1:exon
so has part: feature:87580-87673:-1:exon
so has part: feature:82188-82255:-1:exon
so has part: feature:69905-70031:-1:exon
so has part: feature:69197-69348:-1:exon
so has part: feature:67950-68001:-1:exon
so has part: feature:67614-67694:-1:exon
so has part: feature:66611-66716:-1:exon
so has part: feature:65463-65555:-1:exon
so has part: feature:65183-65288:-1:exon
so has part: feature:63740-63831:-1:exon
so has part: feature:59378-59443:-1:exon

XP_030817568.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:126972-127028:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:126490-126597:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:126066-126116:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:123119-123202:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:122536-122625:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:120836-120928:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:118873-118999:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:89340-89477:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:87580-87673:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:82188-82255:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:69905-70031:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:69197-69348:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:67950-68001:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:67614-67694:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:66611-66716:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:65463-65555:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:65183-65288:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:63740-63831:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:59378-59443:-1:exon

RALGPS1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 87175
gene: RALGPS1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: ras-specific guanine nucleotide-releasing factor RalGPS1 isoform X1
translation: MYKRNDFMASVMVTSATPEGSSSSDSLEGRSSDYANKSYDAVVFDVLKVTPEEFASQITLMDMPVFKAIQPEELASCGWNKREKHTLAPNIVAFTRRFNQVSFWVVREILTAQTLKIRAEILSHFVKIAKKLLELNNLHSLMSVVSALQSAPIFRLTKTWALLNRKDKTTFEKLDYLLSKEDNYKRTREYIRSLKMVPTIPYLGIYLLDLIYIDSAYPASDSIMENEQRSNQMNNILRIIADLQVSCNYDYLTTLPHVQKYLKSVRYIEELQKFVEDDNYKLSLRIEPGNSSPRLVSSKEDIAGPSDMSVVMKFSRRPTCPDASVAASLPTPPVPRHRKSHSLGNNMMCQLSVVESKSATFPTERPRHLLDDSVLECHSPARGHTPSARLANGLSIDSSESSEFSEDLPSGLERGRLYATLGPNWRVPLRNSPRSRSCVYSPTGACSCTAGGPTGVITMEGPLRRKTLLKEGKKPTLSSWTRYWVMLSGSTLLYFGAKALRGTERKHYKSTPGKKVSIAGWMVALPDDPEHPDIFQLNNPDKGNVYKFQTGSRFHAILWHKHLDDACKSNKPQETGVTYLLSRIHPFGDTQLWL
SIO_010081: RALGPS1
subclass of: SO_0000673
so part of: RALGPS1
location: complement(join(59378..59443,63740..63831,65183..65288,65463..65555,66611..66716,67614..67694,67950..68001,69197..69348,69905..70031,82188..82255,87580..87673,89340..89477,118873..118999,120836..120928,122536..122625,123119..123202,126066..126116,126490..126597,126972..127028))
location: region:59378-127028:-1
so has part: feature:126972-127028:-1:exon
so has part: feature:126490-126597:-1:exon
so has part: feature:126066-126116:-1:exon
so has part: feature:123119-123202:-1:exon
so has part: feature:122536-122625:-1:exon
so has part: feature:120836-120928:-1:exon
so has part: feature:118873-118999:-1:exon
so has part: feature:89340-89477:-1:exon
so has part: feature:87580-87673:-1:exon
so has part: feature:82188-82255:-1:exon
so has part: feature:69905-70031:-1:exon
so has part: feature:69197-69348:-1:exon
so has part: feature:67950-68001:-1:exon
so has part: feature:67614-67694:-1:exon
so has part: feature:66611-66716:-1:exon
so has part: feature:65463-65555:-1:exon
so has part: feature:65183-65288:-1:exon
so has part: feature:63740-63831:-1:exon
so has part: feature:59378-59443:-1:exon

XP_030817569.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:126972-127028:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:126490-126597:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:126066-126116:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:123119-123202:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:122536-122625:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:120836-120928:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:118873-118999:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:89340-89477:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:87580-87673:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:82188-82255:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:69905-70031:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:69197-69348:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:67950-68001:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:67614-67694:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:66611-66716:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:65463-65555:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:65183-65288:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:63740-63831:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:59378-59443:-1:exon

RALGPS1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 87175
gene: RALGPS1
product: Ral GEF with PH domain and SH3 binding motif 1, transcript variant X6
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, 12 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_030961712.1
SIO_010081: RALGPS1
subclass of: SO_0000673
so part of: RALGPS1
location: complement(join(60262..63351,63740..63831,65183..65288,65463..65555,66611..66716,67950..68001,69197..69348,69905..70031,82188..82255,87580..87673,89340..89477,118873..118999,120836..120928,122536..122625,123119..123202,126066..126116,126490..126597,126972..127087,128872..129059,131688..131804,134128..134245))
location: region:60262-134245:-1
so has part: feature:134128-134245:-1:exon
so has part: feature:131688-131804:-1:exon
so has part: feature:128872-129059:-1:exon
so has part: feature:126972-127087:-1:exon
so has part: feature:126490-126597:-1:exon
so has part: feature:126066-126116:-1:exon
so has part: feature:123119-123202:-1:exon
so has part: feature:122536-122625:-1:exon
so has part: feature:120836-120928:-1:exon
so has part: feature:118873-118999:-1:exon
so has part: feature:89340-89477:-1:exon
so has part: feature:87580-87673:-1:exon
so has part: feature:82188-82255:-1:exon
so has part: feature:69905-70031:-1:exon
so has part: feature:69197-69348:-1:exon
so has part: feature:67950-68001:-1:exon
so has part: feature:66611-66716:-1:exon
so has part: feature:65463-65555:-1:exon
so has part: feature:65183-65288:-1:exon
so has part: feature:63740-63831:-1:exon
so has part: feature:60262-63351:-1:exon

position:60262:-1
position: 60262
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:134128-134245:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:131688-131804:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:128872-129059:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:126972-127087:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:126490-126597:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:126066-126116:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:123119-123202:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:122536-122625:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:120836-120928:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:118873-118999:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:89340-89477:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:87580-87673:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:82188-82255:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:69905-70031:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:69197-69348:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:67950-68001:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:66611-66716:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:65463-65555:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:65183-65288:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:63740-63831:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:60262-63351:-1:exon

position:63351:-1
position: 63351
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

RALGPS1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 87175
gene: RALGPS1
product: Ral GEF with PH domain and SH3 binding motif 1, transcript variant X9
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, 6 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_030961714.1
SIO_010081: RALGPS1
subclass of: SO_0000673
so part of: RALGPS1
location: complement(join(60262..63351,63740..63831,65463..65555,66611..66716,67614..67694,67950..68001,69197..69348,69905..70031,82188..82255,87580..87673,89340..89477,118873..118999,120836..120928,122536..122625,123119..123202,126066..126116,126490..126597,126972..127087,128872..129059,131688..131804,134128..134245))
location: region:60262-134245:-1
so has part: feature:134128-134245:-1:exon
so has part: feature:131688-131804:-1:exon
so has part: feature:128872-129059:-1:exon
so has part: feature:126972-127087:-1:exon
so has part: feature:126490-126597:-1:exon
so has part: feature:126066-126116:-1:exon
so has part: feature:123119-123202:-1:exon
so has part: feature:122536-122625:-1:exon
so has part: feature:120836-120928:-1:exon
so has part: feature:118873-118999:-1:exon
so has part: feature:89340-89477:-1:exon
so has part: feature:87580-87673:-1:exon
so has part: feature:82188-82255:-1:exon
so has part: feature:69905-70031:-1:exon
so has part: feature:69197-69348:-1:exon
so has part: feature:67950-68001:-1:exon
so has part: feature:67614-67694:-1:exon
so has part: feature:66611-66716:-1:exon
so has part: feature:65463-65555:-1:exon
so has part: feature:63740-63831:-1:exon
so has part: feature:60262-63351:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:134128-134245:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:131688-131804:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:128872-129059:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:126972-127087:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:126490-126597:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:126066-126116:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:123119-123202:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:122536-122625:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:120836-120928:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:118873-118999:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:89340-89477:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:87580-87673:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:82188-82255:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:69905-70031:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:69197-69348:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:67950-68001:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:67614-67694:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:66611-66716:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:65463-65555:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:63740-63831:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:60262-63351:-1:exon

RALGPS1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 87175
gene: RALGPS1
product: Ral GEF with PH domain and SH3 binding motif 1, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, 11 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_030961710.1
SIO_010081: RALGPS1
subclass of: SO_0000673
so part of: RALGPS1
location: complement(join(60262..63351,63740..63831,65183..65288,65463..65555,66611..66716,67614..67694,67950..68001,69197..69348,69905..70031,82188..82255,87580..87673,89340..89477,118873..118999,120836..120928,122536..122625,123119..123202,126066..126116,126490..126597,126972..127087,128872..129059,131688..131804,134128..134245))
location: region:60262-134245:-1
so has part: feature:134128-134245:-1:exon
so has part: feature:131688-131804:-1:exon
so has part: feature:128872-129059:-1:exon
so has part: feature:126972-127087:-1:exon
so has part: feature:126490-126597:-1:exon
so has part: feature:126066-126116:-1:exon
so has part: feature:123119-123202:-1:exon
so has part: feature:122536-122625:-1:exon
so has part: feature:120836-120928:-1:exon
so has part: feature:118873-118999:-1:exon
so has part: feature:89340-89477:-1:exon
so has part: feature:87580-87673:-1:exon
so has part: feature:82188-82255:-1:exon
so has part: feature:69905-70031:-1:exon
so has part: feature:69197-69348:-1:exon
so has part: feature:67950-68001:-1:exon
so has part: feature:67614-67694:-1:exon
so has part: feature:66611-66716:-1:exon
so has part: feature:65463-65555:-1:exon
so has part: feature:65183-65288:-1:exon
so has part: feature:63740-63831:-1:exon
so has part: feature:60262-63351:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:134128-134245:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:131688-131804:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:128872-129059:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:126972-127087:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:126490-126597:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:126066-126116:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:123119-123202:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:122536-122625:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:120836-120928:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:118873-118999:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:89340-89477:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:87580-87673:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:82188-82255:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:69905-70031:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:69197-69348:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:67950-68001:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:67614-67694:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:66611-66716:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:65463-65555:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:65183-65288:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:63740-63831:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:60262-63351:-1:exon

RALGPS1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 87175
gene: RALGPS1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: ras-specific guanine nucleotide-releasing factor RalGPS1 isoform X4
translation: MYKRNDFMASVMVTSATPEGSSSSDSLEGRSSDYANKSYDAVVFDVLKVTPEEFASQITLMDMPVFKAIQPEELASCGWNKREKHTLAPNIVAFTRRFNQVSFWVVREILTAQTLKIRAEILSHFVKIAKKLLELNNLHSLMSVVSALQSAPIFRLTKTWALLNRKDKTTFEKLDYLLSKEDNYKRTREYIRSLKMVPTIPYLGIYLLDLIYIDSAYPASDSIMENEQRSNQMNNILRIIADLQVSCNYDYLTTLPHVQKYLKSVRYIEELQKFVEDDNYKLSLRIEPGNSSPRLVSSKEDIAGPSDMSVVMKFSRRPTCPDASVAASLPTPPVPRHRKSHSLGNNMMCQLSVVESKSATFPTERPRHLLDDSVLECHSPARGHTPSARLANGLSIDSSESSEFSEDLPSGLESPTGACSCTAGGPTGVITMEGPLRRKTLLKEGKKPTLSSWTRYWVMLSGSTLLYFGAKALRGTERKHYKSTPGKKVSIAGWMVALPDDPEHPDIFQLNNPDKGNVYKFQTGSRFHAILWHKHLDDACKSNKPQVPANLMSFE
SIO_010081: RALGPS1
subclass of: SO_0000673
so part of: RALGPS1
location: complement(join(63322..63351,63740..63831,65183..65288,65463..65555,66611..66716,67950..68001,69197..69348,69905..70031,82188..82255,87580..87673,89340..89477,118873..118999,120836..120928,122536..122625,123119..123202,126066..126116,126490..126597,126972..127028))
location: region:63322-127028:-1
so has part: feature:126972-127028:-1:exon
so has part: feature:126490-126597:-1:exon
so has part: feature:126066-126116:-1:exon
so has part: feature:123119-123202:-1:exon
so has part: feature:122536-122625:-1:exon
so has part: feature:120836-120928:-1:exon
so has part: feature:118873-118999:-1:exon
so has part: feature:89340-89477:-1:exon
so has part: feature:87580-87673:-1:exon
so has part: feature:82188-82255:-1:exon
so has part: feature:69905-70031:-1:exon
so has part: feature:69197-69348:-1:exon
so has part: feature:67950-68001:-1:exon
so has part: feature:66611-66716:-1:exon
so has part: feature:65463-65555:-1:exon
so has part: feature:65183-65288:-1:exon
so has part: feature:63740-63831:-1:exon
so has part: feature:63322-63351:-1:exon

XP_030817572.1
type: Protein
SIO_000068: ncbiprotein

position:63322:-1
position: 63322
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:126972-127028:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:126490-126597:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:126066-126116:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:123119-123202:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:122536-122625:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:120836-120928:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:118873-118999:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:89340-89477:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:87580-87673:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:82188-82255:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:69905-70031:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:69197-69348:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:67950-68001:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:66611-66716:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:65463-65555:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:65183-65288:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:63740-63831:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:63322-63351:-1:exon

RALGPS1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 87175
gene: RALGPS1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: ras-specific guanine nucleotide-releasing factor RalGPS1 isoform X2
translation: MYKRNDFMASVMVTSATPEGSSSSDSLEGRSSDYANKSYDAVVFDVLKVTPEEFASQITLMDMPVFKAIQPEELASCGWNKREKHTLAPNIVAFTRRFNQVSFWVVREILTAQTLKIRAEILSHFVKIAKKLLELNNLHSLMSVVSALQSAPIFRLTKTWALLNRKDKTTFEKLDYLLSKEDNYKRTREYIRSLKMVPTIPYLGIYLLDLIYIDSAYPASDSIMENEQRSNQMNNILRIIADLQVSCNYDYLTTLPHVQKYLKSVRYIEELQKFVEDDNYKLSLRIEPGNSSPRLVSSKEDIAGPSDMSVVMKFSRRPTCPDASVAASLPTPPVPRHRKSHSLGNNMMCQLSVVESKSATFPTERPRHLLDDSVLECHSPARGHTPSARLANGLSIDSSESSEFSEDLPSGLERGRLYATLGPNWRVPLRNSPRSRSCVYSPTGACSCTAGGPTGVITMEGPLRRKTLLKEGKKPTLSSWTRYWVMLSGSTLLYFGAKALRGTERKHYKSTPGKKVSIAGWMVALPDDPEHPDIFQLNNPDKGNVYKFQTGSRFHAILWHKHLDDACKSNKPQVPANLMSFE
SIO_010081: RALGPS1
subclass of: SO_0000673
so part of: RALGPS1
location: complement(join(63322..63351,63740..63831,65183..65288,65463..65555,66611..66716,67614..67694,67950..68001,69197..69348,69905..70031,82188..82255,87580..87673,89340..89477,118873..118999,120836..120928,122536..122625,123119..123202,126066..126116,126490..126597,126972..127028))
location: region:63322-127028:-1
so has part: feature:126972-127028:-1:exon
so has part: feature:126490-126597:-1:exon
so has part: feature:126066-126116:-1:exon
so has part: feature:123119-123202:-1:exon
so has part: feature:122536-122625:-1:exon
so has part: feature:120836-120928:-1:exon
so has part: feature:118873-118999:-1:exon
so has part: feature:89340-89477:-1:exon
so has part: feature:87580-87673:-1:exon
so has part: feature:82188-82255:-1:exon
so has part: feature:69905-70031:-1:exon
so has part: feature:69197-69348:-1:exon
so has part: feature:67950-68001:-1:exon
so has part: feature:67614-67694:-1:exon
so has part: feature:66611-66716:-1:exon
so has part: feature:65463-65555:-1:exon
so has part: feature:65183-65288:-1:exon
so has part: feature:63740-63831:-1:exon
so has part: feature:63322-63351:-1:exon

XP_030817570.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:126972-127028:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:126490-126597:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:126066-126116:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:123119-123202:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:122536-122625:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:120836-120928:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:118873-118999:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:89340-89477:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:87580-87673:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:82188-82255:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:69905-70031:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:69197-69348:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:67950-68001:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:67614-67694:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:66611-66716:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:65463-65555:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:65183-65288:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:63740-63831:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:63322-63351:-1:exon

RALGPS1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 87175
gene: RALGPS1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: ras-specific guanine nucleotide-releasing factor RalGPS1 isoform X6
translation: MYKRNDFMASVMVTSATPEGSSSSDSLEGRSSDYANKSYDAVVFDVLKVTPEEFASQITLMDMPVFKAIQPEELASCGWNKREKHTLAPNIVAFTRRFNQVSFWVVREILTAQTLKIRAEILSHFVKIAKKLLELNNLHSLMSVVSALQSAPIFRLTKTWALLNRKDKTTFEKLDYLLSKEDNYKRTREYIRSLKMVPTIPYLGIYLLDLIYIDSAYPASDSIMENEQRSNQMNNILRIIADLQVSCNYDYLTTLPHVQKYLKSVRYIEELQKFVEDDNYKLSLRIEPGNSSPRLVSSKEDIAGPSDMSVVMKFSRRPTCPDASVAASLPTPPVPRHRKSHSLGNNMMCQLSVVESKSATFPTERPRHLLDDSVLECHSPARGHTPSARLANGLSIDSSESSEFSEDLPSGLERGRLYATLGPNWRVPLRNSPRSRSCVYSPTGACSCTAGGPTGVITMEGPLRRKTLLKEGKKPTLSSWTRYWVMLSGSTLLYFGAKALRGTERKHAMFTSFRLVQGFMQYYGINIWMTRAKATSLRYLLI
SIO_010081: RALGPS1
subclass of: SO_0000673
so part of: RALGPS1
location: complement(join(63336..63351,63740..63831,65463..65555,66611..66716,67614..67694,67950..68001,69197..69348,69905..70031,82188..82255,87580..87673,89340..89477,118873..118999,120836..120928,122536..122625,123119..123202,126066..126116,126490..126597,126972..127028))
location: region:63336-127028:-1
so has part: feature:126972-127028:-1:exon
so has part: feature:126490-126597:-1:exon
so has part: feature:126066-126116:-1:exon
so has part: feature:123119-123202:-1:exon
so has part: feature:122536-122625:-1:exon
so has part: feature:120836-120928:-1:exon
so has part: feature:118873-118999:-1:exon
so has part: feature:89340-89477:-1:exon
so has part: feature:87580-87673:-1:exon
so has part: feature:82188-82255:-1:exon
so has part: feature:69905-70031:-1:exon
so has part: feature:69197-69348:-1:exon
so has part: feature:67950-68001:-1:exon
so has part: feature:67614-67694:-1:exon
so has part: feature:66611-66716:-1:exon
so has part: feature:65463-65555:-1:exon
so has part: feature:63740-63831:-1:exon
so has part: feature:63336-63351:-1:exon

XP_030817574.1
type: Protein
SIO_000068: ncbiprotein

position:63336:-1
position: 63336
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:126972-127028:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:126490-126597:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:126066-126116:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:123119-123202:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:122536-122625:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:120836-120928:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:118873-118999:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:89340-89477:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:87580-87673:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:82188-82255:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:69905-70031:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:69197-69348:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:67950-68001:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:67614-67694:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:66611-66716:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:65463-65555:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:63740-63831:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:63336-63351:-1:exon

RALGPS1
type: Miscellaneous RNA
subclass of: SO_0000673
RO_0002162: 87175
gene: RALGPS1
product: Ral GEF with PH domain and SH3 binding motif 1, transcript variant X7
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XR_004061229.1
SIO_010081: RALGPS1
so part of: RALGPS1
location: complement(join(63743..63831,64439..64559,65183..65288,65463..65555,66611..66716,67614..67694,67950..68001,69197..69348,69905..70031,82188..82255,87580..87673,89340..89477,118873..118999,120836..120928,122536..122625,123119..123202,126066..126116,126490..126597,126972..127087,128872..129059,131688..131804,134128..134245))
location: region:63743-134245:-1
so has part: feature:134128-134245:-1:exon
so has part: feature:131688-131804:-1:exon
so has part: feature:128872-129059:-1:exon
so has part: feature:126972-127087:-1:exon
so has part: feature:126490-126597:-1:exon
so has part: feature:126066-126116:-1:exon
so has part: feature:123119-123202:-1:exon
so has part: feature:122536-122625:-1:exon
so has part: feature:120836-120928:-1:exon
so has part: feature:118873-118999:-1:exon
so has part: feature:89340-89477:-1:exon
so has part: feature:87580-87673:-1:exon
so has part: feature:82188-82255:-1:exon
so has part: feature:69905-70031:-1:exon
so has part: feature:69197-69348:-1:exon
so has part: feature:67950-68001:-1:exon
so has part: feature:67614-67694:-1:exon
so has part: feature:66611-66716:-1:exon
so has part: feature:65463-65555:-1:exon
so has part: feature:65183-65288:-1:exon
so has part: feature:64439-64559:-1:exon
so has part: feature:63743-63831:-1:exon

position:63743:-1
position: 63743
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:134128-134245:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:131688-131804:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:128872-129059:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:126972-127087:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:126490-126597:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:126066-126116:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:123119-123202:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:122536-122625:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:120836-120928:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:118873-118999:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:89340-89477:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:87580-87673:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:82188-82255:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:69905-70031:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:69197-69348:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:67950-68001:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:67614-67694:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:66611-66716:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:65463-65555:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:65183-65288:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:64439-64559:-1:exon

position:64439:-1
position: 64439
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:64559:-1
position: 64559
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 22
SIO_000628: feature:63743-63831:-1:exon

RALGPS1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 87175
gene: RALGPS1
product: Ral GEF with PH domain and SH3 binding motif 1, transcript variant X8
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_030961713.1
SIO_010081: RALGPS1
subclass of: SO_0000673
so part of: RALGPS1
location: complement(join(64024..64559,65183..65288,65463..65555,66611..66716,67614..67694,67950..68001,69197..69348,69905..70031,82188..82255,87580..87673,89340..89477,118873..118999,120836..120928,122536..122625,123119..123202,126066..126116,126490..126597,126972..127087,128872..129059,131688..131804,134128..134245))
location: region:64024-134245:-1
so has part: feature:134128-134245:-1:exon
so has part: feature:131688-131804:-1:exon
so has part: feature:128872-129059:-1:exon
so has part: feature:126972-127087:-1:exon
so has part: feature:126490-126597:-1:exon
so has part: feature:126066-126116:-1:exon
so has part: feature:123119-123202:-1:exon
so has part: feature:122536-122625:-1:exon
so has part: feature:120836-120928:-1:exon
so has part: feature:118873-118999:-1:exon
so has part: feature:89340-89477:-1:exon
so has part: feature:87580-87673:-1:exon
so has part: feature:82188-82255:-1:exon
so has part: feature:69905-70031:-1:exon
so has part: feature:69197-69348:-1:exon
so has part: feature:67950-68001:-1:exon
so has part: feature:67614-67694:-1:exon
so has part: feature:66611-66716:-1:exon
so has part: feature:65463-65555:-1:exon
so has part: feature:65183-65288:-1:exon
so has part: feature:64024-64559:-1:exon

position:64024:-1
position: 64024
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:134128-134245:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:131688-131804:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:128872-129059:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:126972-127087:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:126490-126597:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:126066-126116:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:123119-123202:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:122536-122625:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:120836-120928:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:118873-118999:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:89340-89477:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:87580-87673:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:82188-82255:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:69905-70031:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:69197-69348:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:67950-68001:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:67614-67694:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:66611-66716:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:65463-65555:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:65183-65288:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:64024-64559:-1:exon

RALGPS1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 87175
gene: RALGPS1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: ras-specific guanine nucleotide-releasing factor RalGPS1 isoform X5
translation: MYKRNDFMASVMVTSATPEGSSSSDSLEGRSSDYANKSYDAVVFDVLKVTPEEFASQITLMDMPVFKAIQPEELASCGWNKREKHTLAPNIVAFTRRFNQVSFWVVREILTAQTLKIRAEILSHFVKIAKKLLELNNLHSLMSVVSALQSAPIFRLTKTWALLNRKDKTTFEKLDYLLSKEDNYKRTREYIRSLKMVPTIPYLGIYLLDLIYIDSAYPASDSIMENEQRSNQMNNILRIIADLQVSCNYDYLTTLPHVQKYLKSVRYIEELQKFVEDDNYKLSLRIEPGNSSPRLVSSKEDIAGPSDMSVVMKFSRRPTCPDASVAASLPTPPVPRHRKSHSLGNNMMCQLSVVESKSATFPTERPRHLLDDSVLECHSPARGHTPSARLANGLSIDSSESSEFSEDLPSGLERGRLYATLGPNWRVPLRNSPRSRSCVYSPTGACSCTAGGPTGVITMEGPLRRKTLLKEGKKPTLSSWTRYWVMLSGSTLLYFGAKALRGTERKHYKSTPGKKVSIAGWMVALPDDPEHPDIFQLNNPDKGNNLQ
SIO_010081: RALGPS1
subclass of: SO_0000673
so part of: RALGPS1
location: complement(join(64543..64559,65183..65288,65463..65555,66611..66716,67614..67694,67950..68001,69197..69348,69905..70031,82188..82255,87580..87673,89340..89477,118873..118999,120836..120928,122536..122625,123119..123202,126066..126116,126490..126597,126972..127028))
location: region:64543-127028:-1
so has part: feature:126972-127028:-1:exon
so has part: feature:126490-126597:-1:exon
so has part: feature:126066-126116:-1:exon
so has part: feature:123119-123202:-1:exon
so has part: feature:122536-122625:-1:exon
so has part: feature:120836-120928:-1:exon
so has part: feature:118873-118999:-1:exon
so has part: feature:89340-89477:-1:exon
so has part: feature:87580-87673:-1:exon
so has part: feature:82188-82255:-1:exon
so has part: feature:69905-70031:-1:exon
so has part: feature:69197-69348:-1:exon
so has part: feature:67950-68001:-1:exon
so has part: feature:67614-67694:-1:exon
so has part: feature:66611-66716:-1:exon
so has part: feature:65463-65555:-1:exon
so has part: feature:65183-65288:-1:exon
so has part: feature:64543-64559:-1:exon

XP_030817573.1
type: Protein
SIO_000068: ncbiprotein

position:64543:-1
position: 64543
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:126972-127028:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:126490-126597:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:126066-126116:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:123119-123202:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:122536-122625:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:120836-120928:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:118873-118999:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:89340-89477:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:87580-87673:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:82188-82255:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:69905-70031:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:69197-69348:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:67950-68001:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:67614-67694:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:66611-66716:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:65463-65555:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:65183-65288:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:64543-64559:-1:exon

RALGPS1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 87175
gene: RALGPS1
product: Ral GEF with PH domain and SH3 binding motif 1, transcript variant X11
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XM_030961715.1
SIO_010081: RALGPS1
subclass of: SO_0000673
so part of: RALGPS1
location: complement(join(81326..82255,87580..87673,89340..89477,118873..118999,120836..120928,122536..122625,123119..123202,126066..126116,126490..126597,126972..127087,128872..129059,131688..131804,134128..134245))
location: region:81326-134245:-1
so has part: feature:134128-134245:-1:exon
so has part: feature:131688-131804:-1:exon
so has part: feature:128872-129059:-1:exon
so has part: feature:126972-127087:-1:exon
so has part: feature:126490-126597:-1:exon
so has part: feature:126066-126116:-1:exon
so has part: feature:123119-123202:-1:exon
so has part: feature:122536-122625:-1:exon
so has part: feature:120836-120928:-1:exon
so has part: feature:118873-118999:-1:exon
so has part: feature:89340-89477:-1:exon
so has part: feature:87580-87673:-1:exon
so has part: feature:81326-82255:-1:exon

position:81326:-1
position: 81326
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:134128-134245:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:131688-131804:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:128872-129059:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:126972-127087:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:126490-126597:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:126066-126116:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:123119-123202:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:122536-122625:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:120836-120928:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:118873-118999:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:89340-89477:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:87580-87673:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:81326-82255:-1:exon

RALGPS1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 87175
gene: RALGPS1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: ras-specific guanine nucleotide-releasing factor RalGPS1 isoform X7
translation: MYKRNDFMASVMVTSATPEGSSSSDSLEGRSSDYANKSYDAVVFDVLKVTPEEFASQITLMDMPVFKAIQPEELASCGWNKREKHTLAPNIVAFTRRFNQVSFWVVREILTAQTLKIRAEILSHFVKIAKKLLELNNLHSLMSVVSALQSAPIFRLTKTWALLNRKDKTTFEKLDYLLSKEDNYKRTREYIRSLKMVPTIPYLGIYLLDLIYIDSAYPASDSIMENEQRSNQMNNILRIIADLQVSCNYDYLTTLPHVQKYLKSVRYIEELQKFVEDDNYKLSLRIEPGNSSPRLVSSKEDIAGIKHHLKI
SIO_010081: RALGPS1
subclass of: SO_0000673
so part of: RALGPS1
location: complement(join(82162..82255,87580..87673,89340..89477,118873..118999,120836..120928,122536..122625,123119..123202,126066..126116,126490..126597,126972..127028))
location: region:82162-127028:-1
so has part: feature:126972-127028:-1:exon
so has part: feature:126490-126597:-1:exon
so has part: feature:126066-126116:-1:exon
so has part: feature:123119-123202:-1:exon
so has part: feature:122536-122625:-1:exon
so has part: feature:120836-120928:-1:exon
so has part: feature:118873-118999:-1:exon
so has part: feature:89340-89477:-1:exon
so has part: feature:87580-87673:-1:exon
so has part: feature:82162-82255:-1:exon

XP_030817575.1
type: Protein
SIO_000068: ncbiprotein

position:82162:-1
position: 82162
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:126972-127028:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:126490-126597:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:126066-126116:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:123119-123202:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:122536-122625:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:120836-120928:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:118873-118999:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:89340-89477:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:87580-87673:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:82162-82255:-1:exon

ANGPTL2
type: Gene
subclass of: SO_0000704
RO_0002162: 87175
gene: ANGPTL2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 98720..114756
location: region:98720-114756:1
so has part: feature:98720-114756:1:exon
subclass of: SO_0000010

115911041
type: Gene
SIO_000068: ncbigene

position:98720:1
position: 98720
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:114756:1
position: 114756
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:98720-114756:1:exon

ANGPTL2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 87175
gene: ANGPTL2
product: angiopoietin like 2, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 ESTs, 14 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XM_030961717.1
SIO_010081: ANGPTL2
subclass of: SO_0000673
so part of: ANGPTL2
location: join(98720..99397,108000..108835,111986..112179,112422..112692,113189..114756)
location: region:98720-114756:1
so has part: feature:98720-99397:1:exon
so has part: feature:108000-108835:1:exon
so has part: feature:111986-112179:1:exon
so has part: feature:112422-112692:1:exon
so has part: feature:113189-114756:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:98720-99397:1:exon

position:99397:1
position: 99397
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:108000-108835:1:exon

position:108000:1
position: 108000
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:108835:1
position: 108835
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:111986-112179:1:exon

position:111986:1
position: 111986
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:112179:1
position: 112179
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:112422-112692:1:exon

position:112422:1
position: 112422
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:112692:1
position: 112692
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:113189-114756:1:exon

position:113189:1
position: 113189
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

ANGPTL2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 87175
gene: ANGPTL2
product: angiopoietin like 2, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 mRNAs, 7 ESTs, 14 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XM_030961716.1
SIO_010081: ANGPTL2
subclass of: SO_0000673
so part of: ANGPTL2
location: join(98721..99397,107979..108835,111986..112179,112422..112692,113189..114756)
location: region:98721-114756:1
so has part: feature:98721-99397:1:exon
so has part: feature:107979-108835:1:exon
so has part: feature:111986-112179:1:exon
so has part: feature:112422-112692:1:exon
so has part: feature:113189-114756:1:exon

position:98721:1
position: 98721
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:98721-99397:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:107979-108835:1:exon

position:107979:1
position: 107979
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:111986-112179:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:112422-112692:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:113189-114756:1:exon

ANGPTL2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 87175
gene: ANGPTL2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: angiopoietin-related protein 2
translation: MMTTRFICLILVAVVGVTTSETQEFEGNDKEKAQEFIYMNRYKRSSDTQDKCTYTFIVPQQRVTGAICVNSKEPEVLLENRVNKQELQLLNNELLKQKRQIETLQQLVEVDGGIVNEVKLLRKESRNMNSRVTQLYMQLLHEIIRKRDNALELSQLENKILNQTADMLQLANKYKDLEHKYQHLMSIANNQTMIIAQLEEHCQRMPSIKPLPQTPQPPIKVYQPPTYNRINNQISTNEIQSDQNLKVLPPTLPTMPAVTSIPTSTDKPSGPWRDCLQALEDGHDTSSIYLVKPENTNQLMQVWCDQRHDPGGWTVIQRRLDGSVNFFRNWETYKQGFGNIDGEYWLGLENIYWLTNQGNYKLLITMEDWSGRKVFAEYASFRLEPESEYYKLRLGRYNGNAGDSFTWHNGKQFTTLDRDHDVYTGNCAHYQKGGWWYNACAHSNLNGVWYRGGHYRSRYQDGVYWAEFRGGSYSLKKVVMMIRPNPNTFH
SIO_010081: ANGPTL2
subclass of: SO_0000673
so part of: ANGPTL2
location: join(108028..108835,111986..112179,112422..112692,113189..113388)
location: region:108028-113388:1
so has part: feature:108028-108835:1:exon
so has part: feature:111986-112179:1:exon
so has part: feature:112422-112692:1:exon
so has part: feature:113189-113388:1:exon

XP_030817576.1
type: Protein
SIO_000068: ncbiprotein

position:108028:1
position: 108028
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:113388:1
position: 113388
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:108028-108835:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:111986-112179:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:112422-112692:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:113189-113388:1:exon

ANGPTL2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 87175
gene: ANGPTL2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: angiopoietin-related protein 2
translation: MMTTRFICLILVAVVGVTTSETQEFEGNDKEKAQEFIYMNRYKRSSDTQDKCTYTFIVPQQRVTGAICVNSKEPEVLLENRVNKQELQLLNNELLKQKRQIETLQQLVEVDGGIVNEVKLLRKESRNMNSRVTQLYMQLLHEIIRKRDNALELSQLENKILNQTADMLQLANKYKDLEHKYQHLMSIANNQTMIIAQLEEHCQRMPSIKPLPQTPQPPIKVYQPPTYNRINNQISTNEIQSDQNLKVLPPTLPTMPAVTSIPTSTDKPSGPWRDCLQALEDGHDTSSIYLVKPENTNQLMQVWCDQRHDPGGWTVIQRRLDGSVNFFRNWETYKQGFGNIDGEYWLGLENIYWLTNQGNYKLLITMEDWSGRKVFAEYASFRLEPESEYYKLRLGRYNGNAGDSFTWHNGKQFTTLDRDHDVYTGNCAHYQKGGWWYNACAHSNLNGVWYRGGHYRSRYQDGVYWAEFRGGSYSLKKVVMMIRPNPNTFH
SIO_010081: ANGPTL2
subclass of: SO_0000673
so part of: ANGPTL2
location: join(108028..108835,111986..112179,112422..112692,113189..113388)
location: region:108028-113388:1
so has part: feature:108028-108835:1:exon
so has part: feature:111986-112179:1:exon
so has part: feature:112422-112692:1:exon
so has part: feature:113189-113388:1:exon

XP_030817577.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:108028-108835:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:111986-112179:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:112422-112692:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:113189-113388:1:exon

ZBTB34
type: Gene
subclass of: SO_0000704
RO_0002162: 87175
gene: ZBTB34
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(137521..152286)
location: region:137521-152286:-1
so has part: feature:137521-152286:-1:exon
subclass of: SO_0000010

115910924
type: Gene
SIO_000068: ncbigene

position:137521:-1
position: 137521
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:152286:-1
position: 152286
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:137521-152286:-1:exon

ZBTB34
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 87175
gene: ZBTB34
product: zinc finger and BTB domain containing 34, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 11 ESTs, 6 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XM_030961489.1
SIO_010081: ZBTB34
subclass of: SO_0000673
so part of: ZBTB34
location: complement(join(137521..143687,144321..144434,151765..152286))
location: region:137521-152286:-1
so has part: feature:151765-152286:-1:exon
so has part: feature:144321-144434:-1:exon
so has part: feature:137521-143687:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:151765-152286:-1:exon

position:151765:-1
position: 151765
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:144321-144434:-1:exon

position:144321:-1
position: 144321
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:144434:-1
position: 144434
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:137521-143687:-1:exon

position:143687:-1
position: 143687
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

ZBTB34
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 87175
gene: ZBTB34
product: zinc finger and BTB domain containing 34, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 11 ESTs, 6 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_030961491.1
SIO_010081: ZBTB34
subclass of: SO_0000673
so part of: ZBTB34
location: complement(join(137521..143687,144321..144485,151765..152286))
location: region:137521-152286:-1
so has part: feature:151765-152286:-1:exon
so has part: feature:144321-144485:-1:exon
so has part: feature:137521-143687:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:151765-152286:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:144321-144485:-1:exon

position:144485:-1
position: 144485
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:137521-143687:-1:exon

ZBTB34
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 87175
gene: ZBTB34
product: zinc finger and BTB domain containing 34, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 13 ESTs, 6 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XM_030961492.1
SIO_010081: ZBTB34
subclass of: SO_0000673
so part of: ZBTB34
location: complement(join(137521..143687,151765..152285))
location: region:137521-152285:-1
so has part: feature:151765-152285:-1:exon
so has part: feature:137521-143687:-1:exon

position:152285:-1
position: 152285
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:151765-152285:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:137521-143687:-1:exon

ZBTB34
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 87175
gene: ZBTB34
product: zinc finger and BTB domain containing 34, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 11 ESTs, 6 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XM_030961490.1
SIO_010081: ZBTB34
subclass of: SO_0000673
so part of: ZBTB34
location: complement(join(137521..143687,144321..145642))
location: region:137521-145642:-1
so has part: feature:144321-145642:-1:exon
so has part: feature:137521-143687:-1:exon

position:145642:-1
position: 145642
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:144321-145642:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:137521-143687:-1:exon

ZBTB34
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 87175
gene: ZBTB34
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: zinc finger and BTB domain-containing protein 34 isoform X1
translation: MDDVEICLFNWKSRLLFTSVEMDSSSFIQFDVPEYSNTVLSQLNELRLQGKLCDIIVHIQGQPFRAHKAVLAASSPYFRDHSALSTMSGLSISVIKNPNVFEQLLSFCYTGRMSLQLKDVVSFLTAASFLQMQCVIDKCTQILESIHSKISVGDVDSVTVGAEENSENRNGVKDSSYFANPIEISPPYCSQVRQSTAGSDLRMETTPGKTLRSRLQEEGHSDRGSSGSISEYEIQIEGDHDQGDLIVRESQIAEVKVKMEKSDRPSCSDSSSLGDDGYHTEMVDGEQVVAVNVGSYGSVLQHVYSFTHASSQATGMSETFGSMSNTSPSRSMLSCFRGGRARQKRVPTGHLHSDVQGLVQGADSESMVSNPGYENSPRERNARGHWYPYNERLICIYCGKSFNQKGSLDRHMRLHMGITPFVCKFCGKKYTRKDQLEYHIRGHTDDKPFRCEICGKCFPFQGTLNQHLRKNHPGVTEARNRVESPDRTEAFVEQKVDNDASASEAMDSSMEIHAMSNTSD
SIO_010081: ZBTB34
subclass of: SO_0000673
so part of: ZBTB34
location: complement(join(142166..143687,144321..144361))
location: region:142166-144361:-1
so has part: feature:144321-144361:-1:exon
so has part: feature:142166-143687:-1:exon

XP_030817349.1
type: Protein
SIO_000068: ncbiprotein

position:142166:-1
position: 142166
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:144361:-1
position: 144361
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:144321-144361:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:142166-143687:-1:exon

ZBTB34
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 87175
gene: ZBTB34
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: zinc finger and BTB domain-containing protein 34 isoform X1
translation: MDDVEICLFNWKSRLLFTSVEMDSSSFIQFDVPEYSNTVLSQLNELRLQGKLCDIIVHIQGQPFRAHKAVLAASSPYFRDHSALSTMSGLSISVIKNPNVFEQLLSFCYTGRMSLQLKDVVSFLTAASFLQMQCVIDKCTQILESIHSKISVGDVDSVTVGAEENSENRNGVKDSSYFANPIEISPPYCSQVRQSTAGSDLRMETTPGKTLRSRLQEEGHSDRGSSGSISEYEIQIEGDHDQGDLIVRESQIAEVKVKMEKSDRPSCSDSSSLGDDGYHTEMVDGEQVVAVNVGSYGSVLQHVYSFTHASSQATGMSETFGSMSNTSPSRSMLSCFRGGRARQKRVPTGHLHSDVQGLVQGADSESMVSNPGYENSPRERNARGHWYPYNERLICIYCGKSFNQKGSLDRHMRLHMGITPFVCKFCGKKYTRKDQLEYHIRGHTDDKPFRCEICGKCFPFQGTLNQHLRKNHPGVTEARNRVESPDRTEAFVEQKVDNDASASEAMDSSMEIHAMSNTSD
SIO_010081: ZBTB34
subclass of: SO_0000673
so part of: ZBTB34
location: complement(join(142166..143687,144321..144361))
location: region:142166-144361:-1
so has part: feature:144321-144361:-1:exon
so has part: feature:142166-143687:-1:exon

XP_030817350.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:144321-144361:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:142166-143687:-1:exon

ZBTB34
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 87175
gene: ZBTB34
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: zinc finger and BTB domain-containing protein 34 isoform X1
translation: MDDVEICLFNWKSRLLFTSVEMDSSSFIQFDVPEYSNTVLSQLNELRLQGKLCDIIVHIQGQPFRAHKAVLAASSPYFRDHSALSTMSGLSISVIKNPNVFEQLLSFCYTGRMSLQLKDVVSFLTAASFLQMQCVIDKCTQILESIHSKISVGDVDSVTVGAEENSENRNGVKDSSYFANPIEISPPYCSQVRQSTAGSDLRMETTPGKTLRSRLQEEGHSDRGSSGSISEYEIQIEGDHDQGDLIVRESQIAEVKVKMEKSDRPSCSDSSSLGDDGYHTEMVDGEQVVAVNVGSYGSVLQHVYSFTHASSQATGMSETFGSMSNTSPSRSMLSCFRGGRARQKRVPTGHLHSDVQGLVQGADSESMVSNPGYENSPRERNARGHWYPYNERLICIYCGKSFNQKGSLDRHMRLHMGITPFVCKFCGKKYTRKDQLEYHIRGHTDDKPFRCEICGKCFPFQGTLNQHLRKNHPGVTEARNRVESPDRTEAFVEQKVDNDASASEAMDSSMEIHAMSNTSD
SIO_010081: ZBTB34
subclass of: SO_0000673
so part of: ZBTB34
location: complement(join(142166..143687,144321..144361))
location: region:142166-144361:-1
so has part: feature:144321-144361:-1:exon
so has part: feature:142166-143687:-1:exon

XP_030817351.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:144321-144361:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:142166-143687:-1:exon

ZBTB34
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 87175
gene: ZBTB34
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: zinc finger and BTB domain-containing protein 34 isoform X2
translation: MDSSSFIQFDVPEYSNTVLSQLNELRLQGKLCDIIVHIQGQPFRAHKAVLAASSPYFRDHSALSTMSGLSISVIKNPNVFEQLLSFCYTGRMSLQLKDVVSFLTAASFLQMQCVIDKCTQILESIHSKISVGDVDSVTVGAEENSENRNGVKDSSYFANPIEISPPYCSQVRQSTAGSDLRMETTPGKTLRSRLQEEGHSDRGSSGSISEYEIQIEGDHDQGDLIVRESQIAEVKVKMEKSDRPSCSDSSSLGDDGYHTEMVDGEQVVAVNVGSYGSVLQHVYSFTHASSQATGMSETFGSMSNTSPSRSMLSCFRGGRARQKRVPTGHLHSDVQGLVQGADSESMVSNPGYENSPRERNARGHWYPYNERLICIYCGKSFNQKGSLDRHMRLHMGITPFVCKFCGKKYTRKDQLEYHIRGHTDDKPFRCEICGKCFPFQGTLNQHLRKNHPGVTEARNRVESPDRTEAFVEQKVDNDASASEAMDSSMEIHAMSNTSD
SIO_010081: ZBTB34
subclass of: SO_0000673
so part of: ZBTB34
location: complement(142166..143665)
location: region:142166-143665:-1
so has part: feature:142166-143665:-1:exon

XP_030817352.1
type: Protein
SIO_000068: ncbiprotein

position:143665:-1
position: 143665
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:142166-143665:-1:exon

ZBTB43
type: Gene
subclass of: SO_0000704
RO_0002162: 87175
gene: ZBTB43
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(153363..162590)
location: region:153363-162590:-1
so has part: feature:153363-162590:-1:exon
subclass of: SO_0000010

115911004
type: Gene
SIO_000068: ncbigene

position:153363:-1
position: 153363
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:162590:-1
position: 162590
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:153363-162590:-1:exon

ZBTB43
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 87175
gene: ZBTB43
product: zinc finger and BTB domain containing 43
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 9 ESTs, 12 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
transcript id: XM_030961637.1
SIO_010081: ZBTB43
subclass of: SO_0000673
so part of: ZBTB43
location: complement(join(153363..160274,162496..162590))
location: region:153363-162590:-1
so has part: feature:162496-162590:-1:exon
so has part: feature:153363-160274:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:162496-162590:-1:exon

position:162496:-1
position: 162496
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:153363-160274:-1:exon

position:160274:-1
position: 160274
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

ZBTB43
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 87175
gene: ZBTB43
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: zinc finger and BTB domain-containing protein 43
translation: MESGSSSFRVEFPDFSSTILQKLNQQRQQGQLCDVSIVVQGHLFRAHKAVLAASSPYFCDQVLLKNSRRIVLPDVMNPRVFENILLSTYTGRLVMPAPEIVSYLTAASFLQMWHVVDKCTEVLEGNPTVLCQKMNHGSDHQSPSSSSYNGLVETFELGSGGQTEFHKVQELRDGENEEESSKDELSCQLTEHEYLPSNSSTEHDRLSTGMTSQDGEEGTSDSAEYQYSRPMYSKPSIMSHKRWIHVKPERFEQDCEGVDNPYDEHQVSESINTIQTDHSIQSSGVEDFHIGDKKMETEFDEQADESNYDEQVDFYGSSMEEFSGERADGNLSAHRQDLMMAAGYGESIDMAAGIKEETSLTGFSHADKLYPCQCGKSFTHKSQRDRHMSMHLGLRPYGCGVCGKKFKMKHHLVGHMKIHTGIKPYECNICGKRFMWRDSFHRHVTSCTKSYQASKAEQSTTEMN
SIO_010081: ZBTB43
subclass of: SO_0000673
so part of: ZBTB43
location: complement(158857..160251)
location: region:158857-160251:-1
so has part: feature:158857-160251:-1:exon

XP_030817497.1
type: Protein
SIO_000068: ncbiprotein

position:158857:-1
position: 158857
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:160251:-1
position: 160251
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:158857-160251:-1:exon

LMX1B
type: Gene
subclass of: SO_0000704
RO_0002162: 87175
gene: LMX1B
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(237095..324634)
location: region:237095-324634:-1
so has part: feature:237095-324634:-1:exon
subclass of: SO_0000010

115910856
type: Gene
SIO_000068: ncbigene

position:237095:-1
position: 237095
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:324634:-1
position: 324634
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:237095-324634:-1:exon

LMX1B
type: Miscellaneous RNA
subclass of: SO_0000673
RO_0002162: 87175
gene: LMX1B
product: LIM homeobox transcription factor 1 beta, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 mRNAs, 9 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XR_004061220.1
SIO_010081: LMX1B
so part of: LMX1B
location: complement(join(237095..240010,240663..242715,244408..244569,245393..245459,245854..245931,246315..246493,249066..249298,323716..323902,324231..324634))
location: region:237095-324634:-1
so has part: feature:324231-324634:-1:exon
so has part: feature:323716-323902:-1:exon
so has part: feature:249066-249298:-1:exon
so has part: feature:246315-246493:-1:exon
so has part: feature:245854-245931:-1:exon
so has part: feature:245393-245459:-1:exon
so has part: feature:244408-244569:-1:exon
so has part: feature:240663-242715:-1:exon
so has part: feature:237095-240010:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:324231-324634:-1:exon

position:324231:-1
position: 324231
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:323716-323902:-1:exon

position:323716:-1
position: 323716
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:323902:-1
position: 323902
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:249066-249298:-1:exon

position:249066:-1
position: 249066
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:249298:-1
position: 249298
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:246315-246493:-1:exon

position:246315:-1
position: 246315
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:246493:-1
position: 246493
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:245854-245931:-1:exon

position:245854:-1
position: 245854
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:245931:-1
position: 245931
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:245393-245459:-1:exon

position:245393:-1
position: 245393
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:245459:-1
position: 245459
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:244408-244569:-1:exon

position:244408:-1
position: 244408
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:244569:-1
position: 244569
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:240663-242715:-1:exon

position:240663:-1
position: 240663
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:242715:-1
position: 242715
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:237095-240010:-1:exon

position:240010:-1
position: 240010
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LMX1B
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 87175
gene: LMX1B
product: LIM homeobox transcription factor 1 beta, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 mRNAs, 9 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XM_030961351.1
SIO_010081: LMX1B
subclass of: SO_0000673
so part of: LMX1B
location: complement(join(240515..242715,244408..244569,245393..245459,245854..245931,246315..246493,249066..249298,323716..323902,324231..324634))
location: region:240515-324634:-1
so has part: feature:324231-324634:-1:exon
so has part: feature:323716-323902:-1:exon
so has part: feature:249066-249298:-1:exon
so has part: feature:246315-246493:-1:exon
so has part: feature:245854-245931:-1:exon
so has part: feature:245393-245459:-1:exon
so has part: feature:244408-244569:-1:exon
so has part: feature:240515-242715:-1:exon

position:240515:-1
position: 240515
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:324231-324634:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:323716-323902:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:249066-249298:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:246315-246493:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:245854-245931:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:245393-245459:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:244408-244569:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:240515-242715:-1:exon

LMX1B
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 87175
gene: LMX1B
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: LIM homeobox transcription factor 1-beta
translation: MDIATGPESLERCFPRGPPDCAKMLDGIKMEDHPLRSGPATLGVLLGSECQHQAVCEGCQRPISDRFLMRVNESSWHEECLQCAACQQALTTSCYFRDRKLYCKQDYQQLFAAKCSGCMEKIAPTEFVMRALECVYHLSCFCCCVCERQLRKGDEFVLKEGQLLCKSDYEKEKDLLSSVSPDDSDSVKSDDEDGDVKPTKGQVTQGKGSDDGKDPRRPKRPRTILTTQQRRAFKASFEVSSKPCRKVRETLAAETGLSVRVVQVWFQNQRAKMKKLARRHQQQQEQQNSQRLGQEVMSNRMEGMMTSYTPLAPPQQQIVAMEQSSYGTDPFQQGLTPPQMPGDHMNPYGNDSIFHDIDSDTSLTSLSDCFLASSEVNSMQARVGNPIDRLYSMQSSYFAS
SIO_010081: LMX1B
subclass of: SO_0000673
so part of: LMX1B
location: complement(join(242558..242715,244408..244569,245393..245459,245854..245931,246315..246493,249066..249298,323716..323902,324231..324369))
location: region:242558-324369:-1
so has part: feature:324231-324369:-1:exon
so has part: feature:323716-323902:-1:exon
so has part: feature:249066-249298:-1:exon
so has part: feature:246315-246493:-1:exon
so has part: feature:245854-245931:-1:exon
so has part: feature:245393-245459:-1:exon
so has part: feature:244408-244569:-1:exon
so has part: feature:242558-242715:-1:exon

XP_030817211.1
type: Protein
SIO_000068: ncbiprotein

position:242558:-1
position: 242558
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:324369:-1
position: 324369
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:324231-324369:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:323716-323902:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:249066-249298:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:246315-246493:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:245854-245931:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:245393-245459:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:244408-244569:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:242558-242715:-1:exon

MVB12B
type: Gene
subclass of: SO_0000704
RO_0002162: 87175
gene: MVB12B
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(369824..424914)
location: region:369824-424914:-1
so has part: feature:369824-424914:-1:exon
subclass of: SO_0000010

115910795
type: Gene
SIO_000068: ncbigene

position:369824:-1
position: 369824
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:424914:-1
position: 424914
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:369824-424914:-1:exon

MVB12B
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 87175
gene: MVB12B
product: multivesicular body subunit 12B
exception: unclassified transcription discrepancy
note: The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: inserted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 11 ESTs, 6 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
transcript id: XM_030961233.1
SIO_010081: MVB12B
subclass of: SO_0000673
so part of: MVB12B
location: complement(join(369824..374290,377618..377677,378992..379047,394728..394825,406481..406603,406889..407018,409800..409896,412888..412995,418333..418455,424853..424914))
location: region:369824-424914:-1
so has part: feature:424853-424914:-1:exon
so has part: feature:418333-418455:-1:exon
so has part: feature:412888-412995:-1:exon
so has part: feature:409800-409896:-1:exon
so has part: feature:406889-407018:-1:exon
so has part: feature:406481-406603:-1:exon
so has part: feature:394728-394825:-1:exon
so has part: feature:378992-379047:-1:exon
so has part: feature:377618-377677:-1:exon
so has part: feature:369824-374290:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:424853-424914:-1:exon

position:424853:-1
position: 424853
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:418333-418455:-1:exon

position:418333:-1
position: 418333
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:418455:-1
position: 418455
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:412888-412995:-1:exon

position:412888:-1
position: 412888
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:412995:-1
position: 412995
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:409800-409896:-1:exon

position:409800:-1
position: 409800
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:409896:-1
position: 409896
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:406889-407018:-1:exon

position:406889:-1
position: 406889
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:407018:-1
position: 407018
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:406481-406603:-1:exon

position:406481:-1
position: 406481
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:406603:-1
position: 406603
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:394728-394825:-1:exon

position:394728:-1
position: 394728
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:394825:-1
position: 394825
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:378992-379047:-1:exon

position:378992:-1
position: 378992
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:379047:-1
position: 379047
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:377618-377677:-1:exon

position:377618:-1
position: 377618
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:377677:-1
position: 377677
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:369824-374290:-1:exon

position:374290:-1
position: 374290
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

MVB12B
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 87175
gene: MVB12B
exception: unclassified translation discrepancy
note: The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: inserted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: LOW QUALITY PROTEIN: multivesicular body subunit 12B
translation: MRSCFCLRRGXRDPPPAARATEQSMMPEVRDLSDALPELPMDPITGVGVLASRSRAPTGYDVVAQTADGLDADLWKDGLFKSKVTRYLCFTRSFSKENSHLGNVLVDMKLIDIKDTLPVGFMPIQETIDTQEVAFRKKRLCIKFIPRDSTEAAICDIRILGRSKQAPPQYTFIGELNSMGIWYRMGRVPRNHDSTQPAAPPAQAPASTPAPNLPRHISLTLPASFRGKSHSSRLDLEHQHSNLYAISAMDGVPFMISEKFACAPEGMQPVDLLGITIKTLAEIEKEYDYSFRTEQSAAARLPPSPTRCPPVPPS
SIO_010081: MVB12B
subclass of: SO_0000673
so part of: MVB12B
location: complement(join(374204..374290,377618..377677,378992..379047,394728..394825,406481..406603,406889..407018,409800..409896,412888..412995,418333..418455,424853..424914))
location: region:374204-424914:-1
so has part: feature:424853-424914:-1:exon
so has part: feature:418333-418455:-1:exon
so has part: feature:412888-412995:-1:exon
so has part: feature:409800-409896:-1:exon
so has part: feature:406889-407018:-1:exon
so has part: feature:406481-406603:-1:exon
so has part: feature:394728-394825:-1:exon
so has part: feature:378992-379047:-1:exon
so has part: feature:377618-377677:-1:exon
so has part: feature:374204-374290:-1:exon

XP_030817093.1
type: Protein
SIO_000068: ncbiprotein

position:374204:-1
position: 374204
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:424853-424914:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:418333-418455:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:412888-412995:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:409800-409896:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:406889-407018:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:406481-406603:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:394728-394825:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:378992-379047:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:377618-377677:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:374204-374290:-1:exon

PBX3
type: Gene
subclass of: SO_0000704
RO_0002162: 87175
gene: PBX3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(572905..673937)
location: region:572905-673937:-1
so has part: feature:572905-673937:-1:exon
subclass of: SO_0000010

115911033
type: Gene
SIO_000068: ncbigene

position:572905:-1
position: 572905
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:673937:-1
position: 673937
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:572905-673937:-1:exon

PBX3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 87175
gene: PBX3
product: PBX homeobox 3, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 14 ESTs, 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_030961696.1
SIO_010081: PBX3
subclass of: SO_0000673
so part of: PBX3
location: complement(join(572905..574467,577146..577235,578071..578183,579370..579535,585222..585357,587104..587294,591209..591450,671936..672009,673747..673937))
location: region:572905-673937:-1
so has part: feature:673747-673937:-1:exon
so has part: feature:671936-672009:-1:exon
so has part: feature:591209-591450:-1:exon
so has part: feature:587104-587294:-1:exon
so has part: feature:585222-585357:-1:exon
so has part: feature:579370-579535:-1:exon
so has part: feature:578071-578183:-1:exon
so has part: feature:577146-577235:-1:exon
so has part: feature:572905-574467:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:673747-673937:-1:exon

position:673747:-1
position: 673747
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:671936-672009:-1:exon

position:671936:-1
position: 671936
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:672009:-1
position: 672009
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:591209-591450:-1:exon

position:591209:-1
position: 591209
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:591450:-1
position: 591450
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:587104-587294:-1:exon

position:587104:-1
position: 587104
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:587294:-1
position: 587294
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:585222-585357:-1:exon

position:585222:-1
position: 585222
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:585357:-1
position: 585357
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:579370-579535:-1:exon

position:579370:-1
position: 579370
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:579535:-1
position: 579535
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:578071-578183:-1:exon

position:578071:-1
position: 578071
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:578183:-1
position: 578183
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:577146-577235:-1:exon

position:577146:-1
position: 577146
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:577235:-1
position: 577235
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:572905-574467:-1:exon

position:574467:-1
position: 574467
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

PBX3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 87175
gene: PBX3
product: PBX homeobox 3, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 mRNAs, 18 ESTs, 10 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
transcript id: XM_030961697.1
SIO_010081: PBX3
subclass of: SO_0000673
so part of: PBX3
location: complement(join(572905..574467,577146..577235,579370..579535,585222..585357,587104..587294,591209..591450,671936..672009,672839..673936))
location: region:572905-673936:-1
so has part: feature:672839-673936:-1:exon
so has part: feature:671936-672009:-1:exon
so has part: feature:591209-591450:-1:exon
so has part: feature:587104-587294:-1:exon
so has part: feature:585222-585357:-1:exon
so has part: feature:579370-579535:-1:exon
so has part: feature:577146-577235:-1:exon
so has part: feature:572905-574467:-1:exon

position:673936:-1
position: 673936
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:672839-673936:-1:exon

position:672839:-1
position: 672839
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:671936-672009:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:591209-591450:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:587104-587294:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:585222-585357:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:579370-579535:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:577146-577235:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:572905-574467:-1:exon

PBX3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 87175
gene: PBX3
product: PBX homeobox 3, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 mRNAs, 22 ESTs, 16 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XM_030961695.1
SIO_010081: PBX3
subclass of: SO_0000673
so part of: PBX3
location: complement(join(572905..574467,577146..577235,578071..578183,579370..579535,585222..585357,587104..587294,591209..591450,671936..672009,672839..673936))
location: region:572905-673936:-1
so has part: feature:672839-673936:-1:exon
so has part: feature:671936-672009:-1:exon
so has part: feature:591209-591450:-1:exon
so has part: feature:587104-587294:-1:exon
so has part: feature:585222-585357:-1:exon
so has part: feature:579370-579535:-1:exon
so has part: feature:578071-578183:-1:exon
so has part: feature:577146-577235:-1:exon
so has part: feature:572905-574467:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:672839-673936:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:671936-672009:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:591209-591450:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:587104-587294:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:585222-585357:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:579370-579535:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:578071-578183:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:577146-577235:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:572905-574467:-1:exon

PBX3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 87175
gene: PBX3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: pre-B-cell leukemia transcription factor 3 isoform X1
translation: MDDQSRMLQTLAGVNLAGHSVQGGMALPPPHGHEGADGDGRKQDIGDILHQIMTITDQSLDEAQAKKHALNCHRMKPALFSVLCEIKEKTGLSIRGAQEEDPPDPQLMRLDNMLLAEGVSGPEKGGGSAAAAAAAAASGGSSDNSIEHSDYRAKLTQIRQIYHTELEKYEQACNEFTTHVMNLLREQSRTRPISPKEIERMVGIIHRKFSSIQMQLKQSTCEAVMILRSRFLDARRKRRNFSKQATEILNEYFYSHLSNPYPSEEAKEELAKKCSITVSQVSNWFGNKRIRYKKNIGKFQEEANLYAAKTAVTAAHAVAAAVQNNQTNSPTTPNSGSSGSFNLPNSGDMFMNMQSLNGDSYQGSQVGANVQSQVDTLRHVINQTGGYNDGLGGNSLYSPHNLNANGGWQDATTPSSVTSPTEGPGSVHSDTSN
SIO_010081: PBX3
subclass of: SO_0000673
so part of: PBX3
location: complement(join(574375..574467,577146..577235,578071..578183,579370..579535,585222..585357,587104..587294,591209..591450,671936..672009,672839..673035))
location: region:574375-673035:-1
so has part: feature:672839-673035:-1:exon
so has part: feature:671936-672009:-1:exon
so has part: feature:591209-591450:-1:exon
so has part: feature:587104-587294:-1:exon
so has part: feature:585222-585357:-1:exon
so has part: feature:579370-579535:-1:exon
so has part: feature:578071-578183:-1:exon
so has part: feature:577146-577235:-1:exon
so has part: feature:574375-574467:-1:exon

XP_030817555.1
type: Protein
SIO_000068: ncbiprotein

position:574375:-1
position: 574375
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:673035:-1
position: 673035
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:672839-673035:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:671936-672009:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:591209-591450:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:587104-587294:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:585222-585357:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:579370-579535:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:578071-578183:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:577146-577235:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:574375-574467:-1:exon

PBX3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 87175
gene: PBX3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: pre-B-cell leukemia transcription factor 3 isoform X2
translation: MKPALFSVLCEIKEKTGLSIRGAQEEDPPDPQLMRLDNMLLAEGVSGPEKGGGSAAAAAAAAASGGSSDNSIEHSDYRAKLTQIRQIYHTELEKYEQACNEFTTHVMNLLREQSRTRPISPKEIERMVGIIHRKFSSIQMQLKQSTCEAVMILRSRFLDARRKRRNFSKQATEILNEYFYSHLSNPYPSEEAKEELAKKCSITVSQVSNWFGNKRIRYKKNIGKFQEEANLYAAKTAVTAAHAVAAAVQNNQTNSPTTPNSGSSGSFNLPNSGDMFMNMQSLNGDSYQGSQVGANVQSQVDTLRHVINQTGGYNDGLGGNSLYSPHNLNANGGWQDATTPSSVTSPTEGPGSVHSDTSN
SIO_010081: PBX3
subclass of: SO_0000673
so part of: PBX3
location: complement(join(574375..574467,577146..577235,578071..578183,579370..579535,585222..585357,587104..587294,591209..591450,671936..671984))
location: region:574375-671984:-1
so has part: feature:671936-671984:-1:exon
so has part: feature:591209-591450:-1:exon
so has part: feature:587104-587294:-1:exon
so has part: feature:585222-585357:-1:exon
so has part: feature:579370-579535:-1:exon
so has part: feature:578071-578183:-1:exon
so has part: feature:577146-577235:-1:exon
so has part: feature:574375-574467:-1:exon

XP_030817556.1
type: Protein
SIO_000068: ncbiprotein

position:671984:-1
position: 671984
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:671936-671984:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:591209-591450:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:587104-587294:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:585222-585357:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:579370-579535:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:578071-578183:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:577146-577235:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:574375-574467:-1:exon

PBX3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 87175
gene: PBX3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: pre-B-cell leukemia transcription factor 3 isoform X3
translation: MDDQSRMLQTLAGVNLAGHSVQGGMALPPPHGHEGADGDGRKQDIGDILHQIMTITDQSLDEAQAKKHALNCHRMKPALFSVLCEIKEKTGLSIRGAQEEDPPDPQLMRLDNMLLAEGVSGPEKGGGSAAAAAAAAASGGSSDNSIEHSDYRAKLTQIRQIYHTELEKYEQACNEFTTHVMNLLREQSRTRPISPKEIERMVGIIHRKFSSIQMQLKQSTCEAVMILRSRFLDARRKRRNFSKQATEILNEYFYSHLSNPYPSEEAKEELAKKCSITVSQVSNWFGNKRIRYKKNIGKFQEEANLYAAKTAVTAAHAVAAAVQNNQTNSPTTPNSGGYPASCYQSDGRIQ
SIO_010081: PBX3
subclass of: SO_0000673
so part of: PBX3
location: complement(join(577189..577235,579370..579535,585222..585357,587104..587294,591209..591450,671936..672009,672839..673035))
location: region:577189-673035:-1
so has part: feature:672839-673035:-1:exon
so has part: feature:671936-672009:-1:exon
so has part: feature:591209-591450:-1:exon
so has part: feature:587104-587294:-1:exon
so has part: feature:585222-585357:-1:exon
so has part: feature:579370-579535:-1:exon
so has part: feature:577189-577235:-1:exon

XP_030817557.1
type: Protein
SIO_000068: ncbiprotein

position:577189:-1
position: 577189
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:672839-673035:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:671936-672009:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:591209-591450:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:587104-587294:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:585222-585357:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:579370-579535:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:577189-577235:-1:exon

LOC115911034
type: Gene
subclass of: SO_0000704
RO_0002162: 87175
gene: LOC115911034
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(640927..648739)
location: region:640927-648739:-1
so has part: feature:640927-648739:-1:exon
subclass of: SO_0000010

115911034
type: Gene
SIO_000068: ncbigene

position:640927:-1
position: 640927
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:648739:-1
position: 648739
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:640927-648739:-1:exon

LOC115911034
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 87175
gene: LOC115911034
product: uncharacterized LOC115911034
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, and 100% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_030961699.1
SIO_010081: LOC115911034
subclass of: SO_0000673
so part of: LOC115911034
location: complement(640927..648739)
location: region:640927-648739:-1
so has part: feature:640927-648739:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:640927-648739:-1:exon

LOC115911034
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 87175
gene: LOC115911034
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: uncharacterized protein LOC115911034
translation: MHLEVVLILALNLQANRLFSGIPELPSGSGNTIVHVLCTRKHMAGRGQSLLCPREPTPLSLGVRLEMASQNVCVCLDESIIFLLRHEVVQSQQRKKGQEGLFCVLGLVPLHEGESDSRWVLQLDRFLSTERCWPWICSFPARDSTLPTVLAPGEAALELVSSGRGRLSWQGGRVPVLWPTARSSCGTQPVPAAAPRPFQLRHPARSSCGTQAVPAAAPRPFQLWHPARSSCGTRPVPAVAPGPFQLRHPARSSCGTQAVPAAAPRPFQLWHPARSSCGTQAVPAVATRPFQLWHPARSSCGTQAVPAVAAVAEPRLPGDSAAMAGAAAAHSARRRGVD
SIO_010081: LOC115911034
subclass of: SO_0000673
so part of: LOC115911034
location: complement(646993..648009)
location: region:646993-648009:-1
so has part: feature:646993-648009:-1:exon

XP_030817559.1
type: Protein
SIO_000068: ncbiprotein

position:646993:-1
position: 646993
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:648009:-1
position: 648009
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:646993-648009:-1:exon

MAPKAP1
type: Gene
subclass of: SO_0000704
RO_0002162: 87175
gene: MAPKAP1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 676244..756821
location: region:676244-756821:1
so has part: feature:676244-756821:1:exon
subclass of: SO_0000010

115910905
type: Gene
SIO_000068: ncbigene

position:676244:1
position: 676244
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:756821:1
position: 756821
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:676244-756821:1:exon

MAPKAP1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 87175
gene: MAPKAP1
product: MAPK associated protein 1, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 9 ESTs, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_030961440.1
SIO_010081: MAPKAP1
subclass of: SO_0000673
so part of: MAPKAP1
location: join(676244..676300,685562..685746,686498..686820,689564..689653,692817..692965,708919..709091,713018..713194,739722..739861,744293..744430,753466..753563,755329..756820)
location: region:676244-756820:1
so has part: feature:676244-676300:1:exon
so has part: feature:685562-685746:1:exon
so has part: feature:686498-686820:1:exon
so has part: feature:689564-689653:1:exon
so has part: feature:692817-692965:1:exon
so has part: feature:708919-709091:1:exon
so has part: feature:713018-713194:1:exon
so has part: feature:739722-739861:1:exon
so has part: feature:744293-744430:1:exon
so has part: feature:753466-753563:1:exon
so has part: feature:755329-756820:1:exon

position:756820:1
position: 756820
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:676244-676300:1:exon

position:676300:1
position: 676300
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:685562-685746:1:exon

position:685562:1
position: 685562
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:685746:1
position: 685746
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:686498-686820:1:exon

position:686498:1
position: 686498
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:686820:1
position: 686820
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:689564-689653:1:exon

position:689564:1
position: 689564
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:689653:1
position: 689653
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:692817-692965:1:exon

position:692817:1
position: 692817
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:692965:1
position: 692965
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:708919-709091:1:exon

position:708919:1
position: 708919
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:709091:1
position: 709091
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:713018-713194:1:exon

position:713018:1
position: 713018
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:713194:1
position: 713194
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:739722-739861:1:exon

position:739722:1
position: 739722
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:739861:1
position: 739861
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:744293-744430:1:exon

position:744293:1
position: 744293
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:744430:1
position: 744430
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:753466-753563:1:exon

position:753466:1
position: 753466
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:753563:1
position: 753563
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:755329-756820:1:exon

position:755329:1
position: 755329
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

MAPKAP1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 87175
gene: MAPKAP1
product: MAPK associated protein 1, transcript variant X6
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 8 ESTs, 2 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_030961444.1
SIO_010081: MAPKAP1
subclass of: SO_0000673
so part of: MAPKAP1
location: join(676281..676300,677269..677380,685562..685746,686498..686820,689564..689653,692817..692965,708919..709091,713018..713194,720377..720486,734976..735083,744293..744430,753466..753563,755329..756821)
location: region:676281-756821:1
so has part: feature:676281-676300:1:exon
so has part: feature:677269-677380:1:exon
so has part: feature:685562-685746:1:exon
so has part: feature:686498-686820:1:exon
so has part: feature:689564-689653:1:exon
so has part: feature:692817-692965:1:exon
so has part: feature:708919-709091:1:exon
so has part: feature:713018-713194:1:exon
so has part: feature:720377-720486:1:exon
so has part: feature:734976-735083:1:exon
so has part: feature:744293-744430:1:exon
so has part: feature:753466-753563:1:exon
so has part: feature:755329-756821:1:exon

position:676281:1
position: 676281
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:676281-676300:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:677269-677380:1:exon

position:677269:1
position: 677269
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:677380:1
position: 677380
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:685562-685746:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:686498-686820:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:689564-689653:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:692817-692965:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:708919-709091:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:713018-713194:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:720377-720486:1:exon

position:720377:1
position: 720377
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:720486:1
position: 720486
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:734976-735083:1:exon

position:734976:1
position: 734976
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:735083:1
position: 735083
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:744293-744430:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:753466-753563:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:755329-756821:1:exon

MAPKAP1
type: Miscellaneous RNA
subclass of: SO_0000673
RO_0002162: 87175
gene: MAPKAP1
product: MAPK associated protein 1, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 ESTs, 9 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XR_004061221.1
SIO_010081: MAPKAP1
so part of: MAPKAP1
location: join(676281..676300,677269..677380,685562..685746,686498..686820,689564..689653,692817..692965,708919..709091,713018..713194,720377..720486,734976..735083,739722..739861,744293..744430,753466..753563,755329..756820)
location: region:676281-756820:1
so has part: feature:676281-676300:1:exon
so has part: feature:677269-677380:1:exon
so has part: feature:685562-685746:1:exon
so has part: feature:686498-686820:1:exon
so has part: feature:689564-689653:1:exon
so has part: feature:692817-692965:1:exon
so has part: feature:708919-709091:1:exon
so has part: feature:713018-713194:1:exon
so has part: feature:720377-720486:1:exon
so has part: feature:734976-735083:1:exon
so has part: feature:739722-739861:1:exon
so has part: feature:744293-744430:1:exon
so has part: feature:753466-753563:1:exon
so has part: feature:755329-756820:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:676281-676300:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:677269-677380:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:685562-685746:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:686498-686820:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:689564-689653:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:692817-692965:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:708919-709091:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:713018-713194:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:720377-720486:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:734976-735083:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:739722-739861:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:744293-744430:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:753466-753563:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:755329-756820:1:exon

MAPKAP1
type: Miscellaneous RNA
subclass of: SO_0000673
RO_0002162: 87175
gene: MAPKAP1
product: MAPK associated protein 1, transcript variant X5
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 ESTs, 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XR_004061222.1
SIO_010081: MAPKAP1
so part of: MAPKAP1
location: join(676281..676300,677269..677380,685562..685746,686498..686820,689564..689653,692817..692965,708919..709091,713018..713194,720377..720486,739722..739861,744293..744430,753466..753563,755329..756820)
location: region:676281-756820:1
so has part: feature:676281-676300:1:exon
so has part: feature:677269-677380:1:exon
so has part: feature:685562-685746:1:exon
so has part: feature:686498-686820:1:exon
so has part: feature:689564-689653:1:exon
so has part: feature:692817-692965:1:exon
so has part: feature:708919-709091:1:exon
so has part: feature:713018-713194:1:exon
so has part: feature:720377-720486:1:exon
so has part: feature:739722-739861:1:exon
so has part: feature:744293-744430:1:exon
so has part: feature:753466-753563:1:exon
so has part: feature:755329-756820:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:676281-676300:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:677269-677380:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:685562-685746:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:686498-686820:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:689564-689653:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:692817-692965:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:708919-709091:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:713018-713194:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:720377-720486:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:739722-739861:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:744293-744430:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:753466-753563:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:755329-756820:1:exon

MAPKAP1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 87175
gene: MAPKAP1
product: MAPK associated protein 1, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 9 ESTs, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_030961442.1
SIO_010081: MAPKAP1
subclass of: SO_0000673
so part of: MAPKAP1
location: join(676597..677380,685562..685746,686498..686820,689564..689653,692817..692965,708919..709091,713018..713194,739722..739861,744293..744430,753466..753563,755329..756820)
location: region:676597-756820:1
so has part: feature:676597-677380:1:exon
so has part: feature:685562-685746:1:exon
so has part: feature:686498-686820:1:exon
so has part: feature:689564-689653:1:exon
so has part: feature:692817-692965:1:exon
so has part: feature:708919-709091:1:exon
so has part: feature:713018-713194:1:exon
so has part: feature:739722-739861:1:exon
so has part: feature:744293-744430:1:exon
so has part: feature:753466-753563:1:exon
so has part: feature:755329-756820:1:exon

position:676597:1
position: 676597
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:676597-677380:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:685562-685746:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:686498-686820:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:689564-689653:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:692817-692965:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:708919-709091:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:713018-713194:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:739722-739861:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:744293-744430:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:753466-753563:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:755329-756820:1:exon

MAPKAP1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 87175
gene: MAPKAP1
product: MAPK associated protein 1, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 9 ESTs, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_030961443.1
SIO_010081: MAPKAP1
subclass of: SO_0000673
so part of: MAPKAP1
location: join(681718..681810,685562..685746,686498..686820,689564..689653,692817..692965,708919..709091,713018..713194,739722..739861,744293..744430,753466..753563,755329..756820)
location: region:681718-756820:1
so has part: feature:681718-681810:1:exon
so has part: feature:685562-685746:1:exon
so has part: feature:686498-686820:1:exon
so has part: feature:689564-689653:1:exon
so has part: feature:692817-692965:1:exon
so has part: feature:708919-709091:1:exon
so has part: feature:713018-713194:1:exon
so has part: feature:739722-739861:1:exon
so has part: feature:744293-744430:1:exon
so has part: feature:753466-753563:1:exon
so has part: feature:755329-756820:1:exon

position:681718:1
position: 681718
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:681718-681810:1:exon

position:681810:1
position: 681810
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:685562-685746:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:686498-686820:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:689564-689653:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:692817-692965:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:708919-709091:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:713018-713194:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:739722-739861:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:744293-744430:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:753466-753563:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:755329-756820:1:exon

MAPKAP1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 87175
gene: MAPKAP1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: target of rapamycin complex 2 subunit MAPKAP1 isoform X2
translation: MAFLDNPTIILAHIRQSHVTSDDTGMCEMVLIDHDVDLEKFNPSSACGDSGAEPQGSNGDTQGYVYSQSVDITSSWDFGIRRRSNTAQRLERLRKERQNQIKCKNVQWKDRNTSCSAEELSSLFEKKNFRVKSPCSGKQSILSVRLEQCPLQLNNPFNEYSKFDGKGHVGTTATKKIDVYLPLHTSQDKLQPMTVVTIANAKVHDLIGLICWQYTSEGREPKLNDNVSAYCLHIAEDDGEVDTDFPPLDSNEPIHKFGFSTLALVEKYSSPGLAAKQSLFVRINAAHGFSLIQVDSMKVTMKDILQKALKRRKGSQRGSGPQYRLEKQSEPNVPVDLDCTLESQSTLEFCLVRENSISGDKVEIDPVTNQKASTKFWIKQKPISIDSELLCACDLAEEKSPSHAIFKLTYLSNHDYKHLYFESDAATVNEIVLKVNYILESRASTARADYFAQKQRKLSRRTSFSFQKEKKSGQQ
SIO_010081: MAPKAP1
subclass of: SO_0000673
so part of: MAPKAP1
location: join(686562..686820,689564..689653,692817..692965,708919..709091,713018..713194,720377..720486,734976..735083,744293..744430,753466..753563,755329..755454)
location: region:686562-755454:1
so has part: feature:686562-686820:1:exon
so has part: feature:689564-689653:1:exon
so has part: feature:692817-692965:1:exon
so has part: feature:708919-709091:1:exon
so has part: feature:713018-713194:1:exon
so has part: feature:720377-720486:1:exon
so has part: feature:734976-735083:1:exon
so has part: feature:744293-744430:1:exon
so has part: feature:753466-753563:1:exon
so has part: feature:755329-755454:1:exon

XP_030817304.1
type: Protein
SIO_000068: ncbiprotein

position:686562:1
position: 686562
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:755454:1
position: 755454
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:686562-686820:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:689564-689653:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:692817-692965:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:708919-709091:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:713018-713194:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:720377-720486:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:734976-735083:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:744293-744430:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:753466-753563:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:755329-755454:1:exon

MAPKAP1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 87175
gene: MAPKAP1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: target of rapamycin complex 2 subunit MAPKAP1 isoform X1
translation: MAFLDNPTIILAHIRQSHVTSDDTGMCEMVLIDHDVDLEKFNPSSACGDSGAEPQGSNGDTQGYVYSQSVDITSSWDFGIRRRSNTAQRLERLRKERQNQIKCKNVQWKDRNTSCSAEELSSLFEKKNFRVKSPCSGKQSILSVRLEQCPLQLNNPFNEYSKFDGKGHVGTTATKKIDVYLPLHTSQDKLQPMTVVTIANAKVHDLIGLICWQYTSEGREPKLNDNVSAYCLHIAEDDGEVDTDFPPLDSNEPIHKFGFSTLALVEKYSSPGLAAKQSLFVRMFKRRRGVGGGPPDRHCHGAGHAQQPPLQVLQSQHDPPAALHHDVQLGISGDKVEIDPVTNQKASTKFWIKQKPISIDSELLCACDLAEEKSPSHAIFKLTYLSNHDYKHLYFESDAATVNEIVLKVNYILESRASTARADYFAQKQRKLSRRTSFSFQKEKKSGQQ
SIO_010081: MAPKAP1
subclass of: SO_0000673
so part of: MAPKAP1
location: join(686562..686820,689564..689653,692817..692965,708919..709091,713018..713194,739722..739861,744293..744430,753466..753563,755329..755454)
location: region:686562-755454:1
so has part: feature:686562-686820:1:exon
so has part: feature:689564-689653:1:exon
so has part: feature:692817-692965:1:exon
so has part: feature:708919-709091:1:exon
so has part: feature:713018-713194:1:exon
so has part: feature:739722-739861:1:exon
so has part: feature:744293-744430:1:exon
so has part: feature:753466-753563:1:exon
so has part: feature:755329-755454:1:exon

XP_030817300.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:686562-686820:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:689564-689653:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:692817-692965:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:708919-709091:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:713018-713194:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:739722-739861:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:744293-744430:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:753466-753563:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:755329-755454:1:exon

MAPKAP1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 87175
gene: MAPKAP1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: target of rapamycin complex 2 subunit MAPKAP1 isoform X1
translation: MAFLDNPTIILAHIRQSHVTSDDTGMCEMVLIDHDVDLEKFNPSSACGDSGAEPQGSNGDTQGYVYSQSVDITSSWDFGIRRRSNTAQRLERLRKERQNQIKCKNVQWKDRNTSCSAEELSSLFEKKNFRVKSPCSGKQSILSVRLEQCPLQLNNPFNEYSKFDGKGHVGTTATKKIDVYLPLHTSQDKLQPMTVVTIANAKVHDLIGLICWQYTSEGREPKLNDNVSAYCLHIAEDDGEVDTDFPPLDSNEPIHKFGFSTLALVEKYSSPGLAAKQSLFVRMFKRRRGVGGGPPDRHCHGAGHAQQPPLQVLQSQHDPPAALHHDVQLGISGDKVEIDPVTNQKASTKFWIKQKPISIDSELLCACDLAEEKSPSHAIFKLTYLSNHDYKHLYFESDAATVNEIVLKVNYILESRASTARADYFAQKQRKLSRRTSFSFQKEKKSGQQ
SIO_010081: MAPKAP1
subclass of: SO_0000673
so part of: MAPKAP1
location: join(686562..686820,689564..689653,692817..692965,708919..709091,713018..713194,739722..739861,744293..744430,753466..753563,755329..755454)
location: region:686562-755454:1
so has part: feature:686562-686820:1:exon
so has part: feature:689564-689653:1:exon
so has part: feature:692817-692965:1:exon
so has part: feature:708919-709091:1:exon
so has part: feature:713018-713194:1:exon
so has part: feature:739722-739861:1:exon
so has part: feature:744293-744430:1:exon
so has part: feature:753466-753563:1:exon
so has part: feature:755329-755454:1:exon

XP_030817302.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:686562-686820:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:689564-689653:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:692817-692965:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:708919-709091:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:713018-713194:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:739722-739861:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:744293-744430:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:753466-753563:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:755329-755454:1:exon

MAPKAP1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 87175
gene: MAPKAP1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: target of rapamycin complex 2 subunit MAPKAP1 isoform X1
translation: MAFLDNPTIILAHIRQSHVTSDDTGMCEMVLIDHDVDLEKFNPSSACGDSGAEPQGSNGDTQGYVYSQSVDITSSWDFGIRRRSNTAQRLERLRKERQNQIKCKNVQWKDRNTSCSAEELSSLFEKKNFRVKSPCSGKQSILSVRLEQCPLQLNNPFNEYSKFDGKGHVGTTATKKIDVYLPLHTSQDKLQPMTVVTIANAKVHDLIGLICWQYTSEGREPKLNDNVSAYCLHIAEDDGEVDTDFPPLDSNEPIHKFGFSTLALVEKYSSPGLAAKQSLFVRMFKRRRGVGGGPPDRHCHGAGHAQQPPLQVLQSQHDPPAALHHDVQLGISGDKVEIDPVTNQKASTKFWIKQKPISIDSELLCACDLAEEKSPSHAIFKLTYLSNHDYKHLYFESDAATVNEIVLKVNYILESRASTARADYFAQKQRKLSRRTSFSFQKEKKSGQQ
SIO_010081: MAPKAP1
subclass of: SO_0000673
so part of: MAPKAP1
location: join(686562..686820,689564..689653,692817..692965,708919..709091,713018..713194,739722..739861,744293..744430,753466..753563,755329..755454)
location: region:686562-755454:1
so has part: feature:686562-686820:1:exon
so has part: feature:689564-689653:1:exon
so has part: feature:692817-692965:1:exon
so has part: feature:708919-709091:1:exon
so has part: feature:713018-713194:1:exon
so has part: feature:739722-739861:1:exon
so has part: feature:744293-744430:1:exon
so has part: feature:753466-753563:1:exon
so has part: feature:755329-755454:1:exon

XP_030817303.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:686562-686820:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:689564-689653:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:692817-692965:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:708919-709091:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:713018-713194:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:739722-739861:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:744293-744430:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:753466-753563:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:755329-755454:1:exon

GAPVD1
type: Gene
subclass of: SO_0000704
RO_0002162: 87175
gene: GAPVD1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(768363..796022)
location: region:768363-796022:-1
so has part: feature:768363-796022:-1:exon
subclass of: SO_0000010

115910853
type: Gene
SIO_000068: ncbigene

position:768363:-1
position: 768363
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:796022:-1
position: 796022
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:768363-796022:-1:exon

GAPVD1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 87175
gene: GAPVD1
product: GTPase activating protein and VPS9 domains 1
exception: unclassified transcription discrepancy
note: The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: inserted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 mRNAs, 14 ESTs, 4 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_030961347.1
SIO_010081: GAPVD1
subclass of: SO_0000673
so part of: GAPVD1
location: complement(join(768363..771666,772359..772556,772946..773018,773569..773782,774458..774645,774945..775104,775716..775825,776210..776339,776817..776939,777600..777680,778057..778144,778652..779024,779158..779235,779684..779803,780365..780499,781103..781243,781554..781727,782553..782678,783430..783559,784353..784513,785313..785393,786293..786482,786599..786733,787850..787936,789109..789952,790282..790478,795746..795794,795913..796022))
location: region:768363-796022:-1
so has part: feature:795913-796022:-1:exon
so has part: feature:795746-795794:-1:exon
so has part: feature:790282-790478:-1:exon
so has part: feature:789109-789952:-1:exon
so has part: feature:787850-787936:-1:exon
so has part: feature:786599-786733:-1:exon
so has part: feature:786293-786482:-1:exon
so has part: feature:785313-785393:-1:exon
so has part: feature:784353-784513:-1:exon
so has part: feature:783430-783559:-1:exon
so has part: feature:782553-782678:-1:exon
so has part: feature:781554-781727:-1:exon
so has part: feature:781103-781243:-1:exon
so has part: feature:780365-780499:-1:exon
so has part: feature:779684-779803:-1:exon
so has part: feature:779158-779235:-1:exon
so has part: feature:778652-779024:-1:exon
so has part: feature:778057-778144:-1:exon
so has part: feature:777600-777680:-1:exon
so has part: feature:776817-776939:-1:exon
so has part: feature:776210-776339:-1:exon
so has part: feature:775716-775825:-1:exon
so has part: feature:774945-775104:-1:exon
so has part: feature:774458-774645:-1:exon
so has part: feature:773569-773782:-1:exon
so has part: feature:772946-773018:-1:exon
so has part: feature:772359-772556:-1:exon
so has part: feature:768363-771666:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:795913-796022:-1:exon

position:795913:-1
position: 795913
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:795746-795794:-1:exon

position:795746:-1
position: 795746
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:795794:-1
position: 795794
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:790282-790478:-1:exon

position:790282:-1
position: 790282
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:790478:-1
position: 790478
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:789109-789952:-1:exon

position:789109:-1
position: 789109
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:789952:-1
position: 789952
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:787850-787936:-1:exon

position:787850:-1
position: 787850
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:787936:-1
position: 787936
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:786599-786733:-1:exon

position:786599:-1
position: 786599
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:786733:-1
position: 786733
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:786293-786482:-1:exon

position:786293:-1
position: 786293
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:786482:-1
position: 786482
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:785313-785393:-1:exon

position:785313:-1
position: 785313
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:785393:-1
position: 785393
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:784353-784513:-1:exon

position:784353:-1
position: 784353
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:784513:-1
position: 784513
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:783430-783559:-1:exon

position:783430:-1
position: 783430
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:783559:-1
position: 783559
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:782553-782678:-1:exon

position:782553:-1
position: 782553
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:782678:-1
position: 782678
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:781554-781727:-1:exon

position:781554:-1
position: 781554
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:781727:-1
position: 781727
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:781103-781243:-1:exon

position:781103:-1
position: 781103
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:781243:-1
position: 781243
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:780365-780499:-1:exon

position:780365:-1
position: 780365
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:780499:-1
position: 780499
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:779684-779803:-1:exon

position:779684:-1
position: 779684
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:779803:-1
position: 779803
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:779158-779235:-1:exon

position:779158:-1
position: 779158
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:779235:-1
position: 779235
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:778652-779024:-1:exon

position:778652:-1
position: 778652
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:779024:-1
position: 779024
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:778057-778144:-1:exon

position:778057:-1
position: 778057
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:778144:-1
position: 778144
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:777600-777680:-1:exon

position:777600:-1
position: 777600
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:777680:-1
position: 777680
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:776817-776939:-1:exon

position:776817:-1
position: 776817
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:776939:-1
position: 776939
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:776210-776339:-1:exon

position:776210:-1
position: 776210
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:776339:-1
position: 776339
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 22
SIO_000628: feature:775716-775825:-1:exon

position:775716:-1
position: 775716
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:775825:-1
position: 775825
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 23
SIO_000628: feature:774945-775104:-1:exon

position:774945:-1
position: 774945
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:775104:-1
position: 775104
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 24
SIO_000628: feature:774458-774645:-1:exon

position:774458:-1
position: 774458
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:774645:-1
position: 774645
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 25
SIO_000628: feature:773569-773782:-1:exon

position:773569:-1
position: 773569
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:773782:-1
position: 773782
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 26
SIO_000628: feature:772946-773018:-1:exon

position:772946:-1
position: 772946
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:773018:-1
position: 773018
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 27
SIO_000628: feature:772359-772556:-1:exon

position:772359:-1
position: 772359
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:772556:-1
position: 772556
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 28
SIO_000628: feature:768363-771666:-1:exon

position:771666:-1
position: 771666
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

GAPVD1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 87175
gene: GAPVD1
exception: unclassified translation discrepancy
note: The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: inserted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: LOW QUALITY PROTEIN: GTPase-activating protein and VPS9 domain-containing protein 1
translation: MVKLDIHTLAHHLKQERLYVSSEKALIQRLNADVLKTAERLYRTAWISKQQRINLDRLIITSAEASPAECCQHAKILEDTQFVDGYKQLGFQETAYGEFLNRLRENPRLIASCLVAGEKLNQDNTQSVIHTVFTSIYGNCIMQEDESYLLQVLRYLIEFELKESDNPRRLLRRGTCAFSILFKLFSEGLFSAKLFLTATLHEPIMQLLVEDEDHLETDANKLIERFSPVQQEKLFGEKGTEKFKQRVQEMVDSNEAKLVTLVNKFIGYLKQNTYCFPHSLRWIVSQMYKTLSCVDRLEVGEVRAMCTDLLLACFICPAIVNPEQYGIISDAPINEVARFNLMQVGRLLQQLAMTGSEEGDPRTKSNLAKFDKSCVAAFLDVVIDGRAVETPPMSAVNLLEGLSRTVVYMTYSQLTALVGFMRNVMSSDQLKEDRMALENLLANLPQNKPGKSSSLEMTPYNTPQLSPATTPANKKNRLPIGQQLAAITAWDTSATNLSAHITLVTPFATRSRSRSNMLMDQHGDHEGSSQETIPEVQPEEVLVISLGTGPQITPGMMSENEVLNMQLADGGQGDVPIDENKLHGKPDKTLRFSLCSDNLEGISEGPSNRSNSVSSLDLEGESVSELGAGPSGSNGVEALQLLEHEQATTQDNLDDKLRKFEIRDMMGLTDDRDISETVSETWSTDVLGSDFDPNIDEDRLQEIAGAAAENMLGSLLCLPGSGSVLLDPCTGSTISETTSEAWSVEVLPSDSEAPDLKQEERLQELESCSGLGSTSDDTDVREVSSRPSTPGLSVVSGISATSEDIPNKIEDLRSECSSDFGGKDSVTSPDMDETAHGASQLTSPPSQTDSLLALFDPLSSNEGVSAVVRPKVHYARPSHPPPDPPILEGAVGGNEARLPNFGCHALVPAELEAFKQRHSYPERLVRSRSSDIVSSGRRPMSDPGWNRRAGNEDRELPMASSSAGAAAXAAASQSSSSSPSKDSSRGEIEERKDSDDEKSDRNKPWWRKRFVSAMPKAPIPFRKKEKQEKDKDDMVPDRYATLQDDPSPRLSAQAQAAEDILDKYRNAIKRTSPSEGAIVNYDSAEAIGDGESMHDSPRDEALQNMSADDLPDSASQVAQPQGSAFSYRDAKKKLRLALCSADSVALPMLTHSTRNGLPDHTDPEDNEIVCFLKVQLAEAINLQDKNLMAQLQETMRCVSRFDNRTCRKLLASIAEDYRKRAPYIAYLTRCRQGLQTTQAHLERLLQRVLRDKEVANRYFTTVCVRLLLESKEKKIKEFIQDFQKLTAADDKTAQVEDFLQFLYGAMAQDAIWQNASEEQLQDAQLAIERSVMNRIFKLAFYPNQDGDILRDQVLHEHIQRLSKVVTANHKALQIPEVYLREAPWPSAQSEIRTISAYKTPRDKVQCILRMCSTIMNLLSLANEDSVPGADDFVPVLVFVLIKANPPCLLSTVQYISSFYANCLSGEESYWWMQFTAAVEFIKTIDDRK
SIO_010081: GAPVD1
subclass of: SO_0000673
so part of: GAPVD1
location: complement(join(771526..771666,772359..772556,772946..773018,773569..773782,774458..774645,774945..775104,775716..775825,776210..776339,776817..776939,777600..777680,778057..778144,778652..779024,779158..779235,779684..779803,780365..780499,781103..781243,781554..781727,782553..782678,783430..783559,784353..784513,785313..785393,786293..786482,786599..786733,787850..787936,789109..789952,790282..790466))
location: region:771526-790466:-1
so has part: feature:790282-790466:-1:exon
so has part: feature:789109-789952:-1:exon
so has part: feature:787850-787936:-1:exon
so has part: feature:786599-786733:-1:exon
so has part: feature:786293-786482:-1:exon
so has part: feature:785313-785393:-1:exon
so has part: feature:784353-784513:-1:exon
so has part: feature:783430-783559:-1:exon
so has part: feature:782553-782678:-1:exon
so has part: feature:781554-781727:-1:exon
so has part: feature:781103-781243:-1:exon
so has part: feature:780365-780499:-1:exon
so has part: feature:779684-779803:-1:exon
so has part: feature:779158-779235:-1:exon
so has part: feature:778652-779024:-1:exon
so has part: feature:778057-778144:-1:exon
so has part: feature:777600-777680:-1:exon
so has part: feature:776817-776939:-1:exon
so has part: feature:776210-776339:-1:exon
so has part: feature:775716-775825:-1:exon
so has part: feature:774945-775104:-1:exon
so has part: feature:774458-774645:-1:exon
so has part: feature:773569-773782:-1:exon
so has part: feature:772946-773018:-1:exon
so has part: feature:772359-772556:-1:exon
so has part: feature:771526-771666:-1:exon

XP_030817207.1
type: Protein
SIO_000068: ncbiprotein

position:771526:-1
position: 771526
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:790466:-1
position: 790466
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:790282-790466:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:789109-789952:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:787850-787936:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:786599-786733:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:786293-786482:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:785313-785393:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:784353-784513:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:783430-783559:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:782553-782678:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:781554-781727:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:781103-781243:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:780365-780499:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:779684-779803:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:779158-779235:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:778652-779024:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:778057-778144:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:777600-777680:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:776817-776939:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:776210-776339:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:775716-775825:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:774945-775104:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:774458-774645:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:773569-773782:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:772946-773018:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:772359-772556:-1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:771526-771666:-1:exon

HSPA5
type: Gene
subclass of: SO_0000704
RO_0002162: 87175
gene: HSPA5
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 796713..800625
location: region:796713-800625:1
so has part: feature:796713-800625:1:exon
subclass of: SO_0000010

115911081
type: Gene
SIO_000068: ncbigene

position:796713:1
position: 796713
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:800625:1
position: 800625
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:796713-800625:1:exon

HSPA5
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 87175
gene: HSPA5
product: heat shock protein family A (Hsp70) member 5
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 mRNAs, 114 ESTs, 45 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
transcript id: XM_030961784.1
SIO_010081: HSPA5
subclass of: SO_0000673
so part of: HSPA5
location: join(796713..796764,796965..797103,797289..797520,797749..797886,798137..798249,798328..798718,798971..799208,799399..799566,799751..800625)
location: region:796713-800625:1
so has part: feature:796713-796764:1:exon
so has part: feature:796965-797103:1:exon
so has part: feature:797289-797520:1:exon
so has part: feature:797749-797886:1:exon
so has part: feature:798137-798249:1:exon
so has part: feature:798328-798718:1:exon
so has part: feature:798971-799208:1:exon
so has part: feature:799399-799566:1:exon
so has part: feature:799751-800625:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:796713-796764:1:exon

position:796764:1
position: 796764
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:796965-797103:1:exon

position:796965:1
position: 796965
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:797103:1
position: 797103
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:797289-797520:1:exon

position:797289:1
position: 797289
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:797520:1
position: 797520
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:797749-797886:1:exon

position:797749:1
position: 797749
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:797886:1
position: 797886
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:798137-798249:1:exon

position:798137:1
position: 798137
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:798249:1
position: 798249
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:798328-798718:1:exon

position:798328:1
position: 798328
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:798718:1
position: 798718
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:798971-799208:1:exon

position:798971:1
position: 798971
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:799208:1
position: 799208
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:799399-799566:1:exon

position:799399:1
position: 799399
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:799566:1
position: 799566
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:799751-800625:1:exon

position:799751:1
position: 799751
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

HSPA5
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 87175
gene: HSPA5
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: endoplasmic reticulum chaperone BiP
translation: MRLLLLTLLALGAVWADDEEKKEDVGTVVGIDLGTTYSCVGVFKNGRVEIIANDQGNRITPSYVAFTPEGERLIGDAAKNQLTSNPENTVFDAKRLIGRTWNDPSVQQDIKYLPFKVVEKKAKPHIQVDVGGGQTKTFAPEEISAMVLTKMKETAEAYLGKKVTHAVVTVPAYFNDAQRQATKDAGTIAGLNVMRIINEPTAAAIAYGLDKREGEKNILVFDLGGGTFDVSLLTIDNGVFEVVATNGDTHLGGEDFDQRVMEHFIKLYKKKTGKDVRKDNRAVQKLRREVEKAKRALSSQHQARIEIESFFEGEDFSETLTRAKFEELNMDLFRSTMKPVQKVLEDSDLKKSDIDEIVLVGGSTRIPKIQQLVKEFFNGKEPSRGINPDEAVAYGAAVQAGVLSGDQDTGDLVLLDVCPLTLGIETVGGVMTKLIPRNTVVPTKKSQIFSTASDNQPTVTIKVYEGERPLTKDNHLLGTFDLTGIPPAPRGVPQIEVTFEIDVNGILRVTAEDKGTGNKNKITITNDQNRLTPEEIERMVNDAEKFAEEDKKLKERIDARNELESYAYSLKNQIGDKEKLGGKLSSEDKETIEKAVEEKIEWLESHQDGDIEDFKAQKKELEEVVQPIVSKLYGSAGPPPGEEEAAEKDEL
SIO_010081: HSPA5
subclass of: SO_0000673
so part of: HSPA5
location: join(796988..797103,797289..797520,797749..797886,798137..798249,798328..798718,798971..799208,799399..799566,799751..800310)
location: region:796988-800310:1
so has part: feature:796988-797103:1:exon
so has part: feature:797289-797520:1:exon
so has part: feature:797749-797886:1:exon
so has part: feature:798137-798249:1:exon
so has part: feature:798328-798718:1:exon
so has part: feature:798971-799208:1:exon
so has part: feature:799399-799566:1:exon
so has part: feature:799751-800310:1:exon

XP_030817644.1
type: Protein
SIO_000068: ncbiprotein

position:796988:1
position: 796988
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:800310:1
position: 800310
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:796988-797103:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:797289-797520:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:797749-797886:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:798137-798249:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:798328-798718:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:798971-799208:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:799399-799566:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:799751-800310:1:exon

RABEPK
type: Gene
subclass of: SO_0000704
RO_0002162: 87175
gene: RABEPK
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(801030..803378)
location: region:801030-803378:-1
so has part: feature:801030-803378:-1:exon
subclass of: SO_0000010

115911082
type: Gene
SIO_000068: ncbigene

position:801030:-1
position: 801030
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:803378:-1
position: 803378
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:801030-803378:-1:exon

RABEPK
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 87175
gene: RABEPK
product: Rab9 effector protein with kelch motifs, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 ESTs, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_030961786.1
SIO_010081: RABEPK
subclass of: SO_0000673
so part of: RABEPK
location: complement(join(801030..801634,801807..801956,802137..802286,802791..802943,803025..803161,803300..803378))
location: region:801030-803378:-1
so has part: feature:803300-803378:-1:exon
so has part: feature:803025-803161:-1:exon
so has part: feature:802791-802943:-1:exon
so has part: feature:802137-802286:-1:exon
so has part: feature:801807-801956:-1:exon
so has part: feature:801030-801634:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:803300-803378:-1:exon

position:803300:-1
position: 803300
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:803025-803161:-1:exon

position:803025:-1
position: 803025
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:803161:-1
position: 803161
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:802791-802943:-1:exon

position:802791:-1
position: 802791
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:802943:-1
position: 802943
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:802137-802286:-1:exon

position:802137:-1
position: 802137
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:802286:-1
position: 802286
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:801807-801956:-1:exon

position:801807:-1
position: 801807
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:801956:-1
position: 801956
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:801030-801634:-1:exon

position:801634:-1
position: 801634
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

RABEPK
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 87175
gene: RABEPK
product: Rab9 effector protein with kelch motifs, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 ESTs, 7 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_030961785.1
SIO_010081: RABEPK
subclass of: SO_0000673
so part of: RABEPK
location: complement(join(801030..801634,801807..801956,802137..802286,802538..802699,802791..802943,803025..803161,803300..803378))
location: region:801030-803378:-1
so has part: feature:803300-803378:-1:exon
so has part: feature:803025-803161:-1:exon
so has part: feature:802791-802943:-1:exon
so has part: feature:802538-802699:-1:exon
so has part: feature:802137-802286:-1:exon
so has part: feature:801807-801956:-1:exon
so has part: feature:801030-801634:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:803300-803378:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:803025-803161:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:802791-802943:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:802538-802699:-1:exon

position:802538:-1
position: 802538
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:802699:-1
position: 802699
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:802137-802286:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:801807-801956:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:801030-801634:-1:exon

RABEPK
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 87175
gene: RABEPK
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: rab9 effector protein with kelch motifs isoform X2
translation: MAPRALPLLQPGRRPRPGHWYRLSPRGERPRGRVGLGCLLLPGRVLLLGGADPAGAFADAHFVELALLRWVPAGWRGLRPRYEHATLLPAVGPPRLWVFGGAHPAGNRGCVQVLDPAALAWSQPETHGDPPSPRHGHAVVAVGTKLFIHGGLAGDVFYNDLFCIDTNDMRWEKIPATGDVPGGRASHSSAVFQDHLYIFGGIGPDGTLNTTYKYHTGRQHWTLLQFESPLPSGRLDHAMCVIPWQAGAHGDTGETPAGTEPPVSAGDRAEPLQQGLGEGCAEDTSVHLLFVFGGMDTQGHIHRDCLVTLIE
SIO_010081: RABEPK
subclass of: SO_0000673
so part of: RABEPK
location: complement(join(801348..801634,801807..801956,802137..802286,802791..802943,803025..803161,803300..803358))
location: region:801348-803358:-1
so has part: feature:803300-803358:-1:exon
so has part: feature:803025-803161:-1:exon
so has part: feature:802791-802943:-1:exon
so has part: feature:802137-802286:-1:exon
so has part: feature:801807-801956:-1:exon
so has part: feature:801348-801634:-1:exon

XP_030817646.1
type: Protein
SIO_000068: ncbiprotein

position:801348:-1
position: 801348
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:803358:-1
position: 803358
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:803300-803358:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:803025-803161:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:802791-802943:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:802137-802286:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:801807-801956:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:801348-801634:-1:exon

RABEPK
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 87175
gene: RABEPK
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: rab9 effector protein with kelch motifs isoform X1
translation: MAPRALPLLQPGRRPRPGHWYRLSPRGERPRGRVGLGCLLLPGRVLLLGGADPAGAFADAHFVELALLRWVPAGWRGLRPRYEHATLLPAVGPPRLWVFGGAHPAGNRGCVQVLDPEIGTWESPAVRGEQPQPRTFHTSSAGIGARLFVFGGGDKGAEPVKDQRLHVFDTAALAWSQPETHGDPPSPRHGHAVVAVGTKLFIHGGLAGDVFYNDLFCIDTNDMRWEKIPATGDVPGGRASHSSAVFQDHLYIFGGIGPDGTLNTTYKYHTGRQHWTLLQFESPLPSGRLDHAMCVIPWQAGAHGDTGETPAGTEPPVSAGDRAEPLQQGLGEGCAEDTSVHLLFVFGGMDTQGHIHRDCLVTLIE
SIO_010081: RABEPK
subclass of: SO_0000673
so part of: RABEPK
location: complement(join(801348..801634,801807..801956,802137..802286,802538..802699,802791..802943,803025..803161,803300..803358))
location: region:801348-803358:-1
so has part: feature:803300-803358:-1:exon
so has part: feature:803025-803161:-1:exon
so has part: feature:802791-802943:-1:exon
so has part: feature:802538-802699:-1:exon
so has part: feature:802137-802286:-1:exon
so has part: feature:801807-801956:-1:exon
so has part: feature:801348-801634:-1:exon

XP_030817645.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:803300-803358:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:803025-803161:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:802791-802943:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:802538-802699:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:802137-802286:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:801807-801956:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:801348-801634:-1:exon

PPP6C
type: Gene
subclass of: SO_0000704
RO_0002162: 87175
gene: PPP6C
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 803462..806583
location: region:803462-806583:1
so has part: feature:803462-806583:1:exon
subclass of: SO_0000010

115911083
type: Gene
SIO_000068: ncbigene

position:803462:1
position: 803462
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:806583:1
position: 806583
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:803462-806583:1:exon

PPP6C
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 87175
gene: PPP6C
product: protein phosphatase 6 catalytic subunit
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 mRNAs, 24 ESTs, 40 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
transcript id: XM_030961787.1
SIO_010081: PPP6C
subclass of: SO_0000673
so part of: PPP6C
location: join(803462..803565,803697..803792,803882..803947,804305..804446,804846..804925,805022..805231,805889..806583)
location: region:803462-806583:1
so has part: feature:803462-803565:1:exon
so has part: feature:803697-803792:1:exon
so has part: feature:803882-803947:1:exon
so has part: feature:804305-804446:1:exon
so has part: feature:804846-804925:1:exon
so has part: feature:805022-805231:1:exon
so has part: feature:805889-806583:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:803462-803565:1:exon

position:803565:1
position: 803565
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:803697-803792:1:exon

position:803697:1
position: 803697
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:803792:1
position: 803792
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:803882-803947:1:exon

position:803882:1
position: 803882
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:803947:1
position: 803947
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:804305-804446:1:exon

position:804305:1
position: 804305
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:804446:1
position: 804446
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:804846-804925:1:exon

position:804846:1
position: 804846
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:804925:1
position: 804925
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:805022-805231:1:exon

position:805022:1
position: 805022
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:805231:1
position: 805231
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:805889-806583:1:exon

position:805889:1
position: 805889
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

PPP6C
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 87175
gene: PPP6C
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: serine/threonine-protein phosphatase 6 catalytic subunit
translation: MAPLDLDKYVEIARLCKYLPENDLKRLCDYVCDLLLEESNVQPVSTPVTVCGDIHGQFYDLCELFRTGGQVPDTNYIFMGDFVDRGYYSLETFTYLLALKAKWPDRITLLRGNHESRQITQVYGFYDECQTKYGNANAWRYCTKVFDMLTIAALIDEQILCVHGGLSPDIKTLDQIRTIERNQEIPHKGAFCDLVWSDPEDVDTWAISPRGAGWLFGAKVTNEFVHINNLKLICRAHQLVHEGYKFMFDEKLVTVWSAPNYCYRCGNIASIMVFKDVNTREPKLFRAVPDSERVIPPRTTTPYFL
SIO_010081: PPP6C
subclass of: SO_0000673
so part of: PPP6C
location: join(803491..803565,803697..803792,803882..803947,804305..804446,804846..804925,805022..805231,805889..806137)
location: region:803491-806137:1
so has part: feature:803491-803565:1:exon
so has part: feature:803697-803792:1:exon
so has part: feature:803882-803947:1:exon
so has part: feature:804305-804446:1:exon
so has part: feature:804846-804925:1:exon
so has part: feature:805022-805231:1:exon
so has part: feature:805889-806137:1:exon

XP_030817647.1
type: Protein
SIO_000068: ncbiprotein

position:803491:1
position: 803491
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:806137:1
position: 806137
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:803491-803565:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:803697-803792:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:803882-803947:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:804305-804446:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:804846-804925:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:805022-805231:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:805889-806137:1:exon

ARPC5L
type: Gene
subclass of: SO_0000704
RO_0002162: 87175
gene: ARPC5L
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 806768..809740
location: region:806768-809740:1
so has part: feature:806768-809740:1:exon
subclass of: SO_0000010

115911084
type: Gene
SIO_000068: ncbigene

position:806768:1
position: 806768
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:809740:1
position: 809740
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:806768-809740:1:exon

ARPC5L
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 87175
gene: ARPC5L
product: actin related protein 2/3 complex subunit 5 like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 19 ESTs, 17 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
transcript id: XM_030961788.1
SIO_010081: ARPC5L
subclass of: SO_0000673
so part of: ARPC5L
location: join(806768..806945,807075..807147,807396..807572,809186..809740)
location: region:806768-809740:1
so has part: feature:806768-806945:1:exon
so has part: feature:807075-807147:1:exon
so has part: feature:807396-807572:1:exon
so has part: feature:809186-809740:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:806768-806945:1:exon

position:806945:1
position: 806945
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:807075-807147:1:exon

position:807075:1
position: 807075
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:807147:1
position: 807147
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:807396-807572:1:exon

position:807396:1
position: 807396
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:807572:1
position: 807572
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:809186-809740:1:exon

position:809186:1
position: 809186
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

ARPC5L
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 87175
gene: ARPC5L
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: actin-related protein 2/3 complex subunit 5-like protein
translation: MARSTLSSRFRRLDIDQYDENRFVEEPEEAAAAEPDASPEVEALLRQGEALRAFHTAIRSSPGNTRSQAMKEQAQGTMLKVLTSFKSSEIEQAVNSLDRNGVDLLMKYIYKGFEKPTENSSAILLQWHEKALAVGGLGSIIRVLTARKTV
SIO_010081: ARPC5L
subclass of: SO_0000673
so part of: ARPC5L
location: join(806806..806945,807075..807147,807396..807572,809186..809248)
location: region:806806-809248:1
so has part: feature:806806-806945:1:exon
so has part: feature:807075-807147:1:exon
so has part: feature:807396-807572:1:exon
so has part: feature:809186-809248:1:exon

XP_030817648.1
type: Protein
SIO_000068: ncbiprotein

position:806806:1
position: 806806
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:809248:1
position: 809248
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:806806-806945:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:807075-807147:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:807396-807572:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:809186-809248:1:exon

GOLGA1
type: Gene
subclass of: SO_0000704
RO_0002162: 87175
gene: GOLGA1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(809951..826080)
location: region:809951-826080:-1
so has part: feature:809951-826080:-1:exon
subclass of: SO_0000010

115911080
type: Gene
SIO_000068: ncbigene

position:809951:-1
position: 809951
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:826080:-1
position: 826080
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:809951-826080:-1:exon

GOLGA1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 87175
gene: GOLGA1
product: golgin A1, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XM_030961783.1
SIO_010081: GOLGA1
subclass of: SO_0000673
so part of: GOLGA1
location: complement(join(809951..812699,813518..813604,813788..813952,814476..814535,815024..815185,815351..815508,815778..815880,816687..816776,817495..817590,817820..817972,818231..818326,818766..818861,819687..819812,820031..820126,820250..820361,820738..820907,821177..821305,821823..821855,822366..822463,822950..823024,823837..823927,825347..825660,826020..826080))
location: region:809951-826080:-1
so has part: feature:826020-826080:-1:exon
so has part: feature:825347-825660:-1:exon
so has part: feature:823837-823927:-1:exon
so has part: feature:822950-823024:-1:exon
so has part: feature:822366-822463:-1:exon
so has part: feature:821823-821855:-1:exon
so has part: feature:821177-821305:-1:exon
so has part: feature:820738-820907:-1:exon
so has part: feature:820250-820361:-1:exon
so has part: feature:820031-820126:-1:exon
so has part: feature:819687-819812:-1:exon
so has part: feature:818766-818861:-1:exon
so has part: feature:818231-818326:-1:exon
so has part: feature:817820-817972:-1:exon
so has part: feature:817495-817590:-1:exon
so has part: feature:816687-816776:-1:exon
so has part: feature:815778-815880:-1:exon
so has part: feature:815351-815508:-1:exon
so has part: feature:815024-815185:-1:exon
so has part: feature:814476-814535:-1:exon
so has part: feature:813788-813952:-1:exon
so has part: feature:813518-813604:-1:exon
so has part: feature:809951-812699:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:826020-826080:-1:exon

position:826020:-1
position: 826020
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:825347-825660:-1:exon

position:825347:-1
position: 825347
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:825660:-1
position: 825660
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:823837-823927:-1:exon

position:823837:-1
position: 823837
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:823927:-1
position: 823927
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:822950-823024:-1:exon

position:822950:-1
position: 822950
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:823024:-1
position: 823024
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:822366-822463:-1:exon

position:822366:-1
position: 822366
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:822463:-1
position: 822463
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:821823-821855:-1:exon

position:821823:-1
position: 821823
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:821855:-1
position: 821855
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:821177-821305:-1:exon

position:821177:-1
position: 821177
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:821305:-1
position: 821305
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:820738-820907:-1:exon

position:820738:-1
position: 820738
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:820907:-1
position: 820907
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:820250-820361:-1:exon

position:820250:-1
position: 820250
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:820361:-1
position: 820361
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:820031-820126:-1:exon

position:820031:-1
position: 820031
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:820126:-1
position: 820126
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:819687-819812:-1:exon

position:819687:-1
position: 819687
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:819812:-1
position: 819812
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:818766-818861:-1:exon

position:818766:-1
position: 818766
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:818861:-1
position: 818861
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:818231-818326:-1:exon

position:818231:-1
position: 818231
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:818326:-1
position: 818326
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:817820-817972:-1:exon

position:817820:-1
position: 817820
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:817972:-1
position: 817972
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:817495-817590:-1:exon

position:817495:-1
position: 817495
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:817590:-1
position: 817590
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:816687-816776:-1:exon

position:816687:-1
position: 816687
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:816776:-1
position: 816776
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:815778-815880:-1:exon

position:815778:-1
position: 815778
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:815880:-1
position: 815880
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:815351-815508:-1:exon

position:815351:-1
position: 815351
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:815508:-1
position: 815508
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:815024-815185:-1:exon

position:815024:-1
position: 815024
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:815185:-1
position: 815185
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:814476-814535:-1:exon

position:814476:-1
position: 814476
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:814535:-1
position: 814535
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:813788-813952:-1:exon

position:813788:-1
position: 813788
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:813952:-1
position: 813952
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 22
SIO_000628: feature:813518-813604:-1:exon

position:813518:-1
position: 813518
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:813604:-1
position: 813604
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 23
SIO_000628: feature:809951-812699:-1:exon

position:812699:-1
position: 812699
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

GOLGA1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 87175
gene: GOLGA1
product: golgin A1, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_030961782.1
SIO_010081: GOLGA1
subclass of: SO_0000673
so part of: GOLGA1
location: complement(join(809951..812699,813518..813604,813782..813952,814476..814535,815024..815185,815351..815508,815778..815880,816687..816776,817495..817590,817820..817972,818231..818326,818766..818861,819687..819812,820031..820126,820250..820361,820738..820907,821177..821305,821823..821855,822366..822463,822950..823024,823837..823927,825347..825660,826020..826080))
location: region:809951-826080:-1
so has part: feature:826020-826080:-1:exon
so has part: feature:825347-825660:-1:exon
so has part: feature:823837-823927:-1:exon
so has part: feature:822950-823024:-1:exon
so has part: feature:822366-822463:-1:exon
so has part: feature:821823-821855:-1:exon
so has part: feature:821177-821305:-1:exon
so has part: feature:820738-820907:-1:exon
so has part: feature:820250-820361:-1:exon
so has part: feature:820031-820126:-1:exon
so has part: feature:819687-819812:-1:exon
so has part: feature:818766-818861:-1:exon
so has part: feature:818231-818326:-1:exon
so has part: feature:817820-817972:-1:exon
so has part: feature:817495-817590:-1:exon
so has part: feature:816687-816776:-1:exon
so has part: feature:815778-815880:-1:exon
so has part: feature:815351-815508:-1:exon
so has part: feature:815024-815185:-1:exon
so has part: feature:814476-814535:-1:exon
so has part: feature:813782-813952:-1:exon
so has part: feature:813518-813604:-1:exon
so has part: feature:809951-812699:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:826020-826080:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:825347-825660:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:823837-823927:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:822950-823024:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:822366-822463:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:821823-821855:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:821177-821305:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:820738-820907:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:820250-820361:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:820031-820126:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:819687-819812:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:818766-818861:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:818231-818326:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:817820-817972:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:817495-817590:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:816687-816776:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:815778-815880:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:815351-815508:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:815024-815185:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:814476-814535:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:813782-813952:-1:exon

position:813782:-1
position: 813782
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 22
SIO_000628: feature:813518-813604:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:809951-812699:-1:exon

GOLGA1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 87175
gene: GOLGA1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: golgin subfamily A member 1 isoform X2
translation: MFAKLKKKIAEEAAVAPRPGGNARMPRSVSKESITSVGADSGDDFASDGSSSREDLSSQLLRRNEQIRKLEVKLSDYADQIRNLQKIKEKLENALEKHQDSSMRKFQEQNEAHQASRAKMAEGMALALEKKDKEWMEKLAQVEKEKKMLQTQLQEMREQSLNLFQKRDEIDELEGFQQQEIAKVKHMLLQKEECLSRAEQELAARAQELSQAAAELQEARAKASGLSRDLQDLQQQLLQLQAHRDELMTAETNAENKITALELREQELQTVIQHLSVDLQNARVAGSGCEKRLEMLQVEHESLKVEYEQQKQKMAFELAERDRLTEQLQEKVSSLEKKLERNLSGDEHVQELLKEKAVLEQRLEESRQQVLTDRTQHSQALNQLETQNKELEEKLRIATETLKKSKEAAADQDLKIQKLQTDLEEERKHLQQQILSEKHQYDEKVTGLESQIAALEKAWELDKTTTQHRISQLEKENENLKGSKEGYESSLKQQESELNRLKNEMSSRETVSVEIAKALEETRKQREELQQQVSHLNTLIKEKDQLIDEKCDLLLKQKEELNQLSQDHEAVLLQVHQLQLDIEARQSQAVEIEETARKEIDELKLQVQECLLAREHEKNVLELEESTRALNNEHLPSPENSVVEQNGQVAAADVVQLQKDNRELEQQIAEKNKMIKQLQQRMAELKKTLQKELKIRPDSEVPELRANSEVPNASVTVTNNSDLNDSREINFEYLKHVVLKFMSCRESEAFHLIKAVSVLLNFSQEEENMLKETLEYKMSWFGSKPSPKGSIRPSISSPRTLWP
SIO_010081: GOLGA1
subclass of: SO_0000673
so part of: GOLGA1
location: complement(join(812619..812699,813518..813604,813788..813952,814476..814535,815024..815185,815351..815508,815778..815880,816687..816776,817495..817590,817820..817972,818231..818326,818766..818861,819687..819812,820031..820126,820250..820361,820738..820907,821177..821305,821823..821855,822366..822463,822950..823024,823837..823927,825347..825481))
location: region:812619-825481:-1
so has part: feature:825347-825481:-1:exon
so has part: feature:823837-823927:-1:exon
so has part: feature:822950-823024:-1:exon
so has part: feature:822366-822463:-1:exon
so has part: feature:821823-821855:-1:exon
so has part: feature:821177-821305:-1:exon
so has part: feature:820738-820907:-1:exon
so has part: feature:820250-820361:-1:exon
so has part: feature:820031-820126:-1:exon
so has part: feature:819687-819812:-1:exon
so has part: feature:818766-818861:-1:exon
so has part: feature:818231-818326:-1:exon
so has part: feature:817820-817972:-1:exon
so has part: feature:817495-817590:-1:exon
so has part: feature:816687-816776:-1:exon
so has part: feature:815778-815880:-1:exon
so has part: feature:815351-815508:-1:exon
so has part: feature:815024-815185:-1:exon
so has part: feature:814476-814535:-1:exon
so has part: feature:813788-813952:-1:exon
so has part: feature:813518-813604:-1:exon
so has part: feature:812619-812699:-1:exon

XP_030817643.1
type: Protein
SIO_000068: ncbiprotein

position:812619:-1
position: 812619
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:825481:-1
position: 825481
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:825347-825481:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:823837-823927:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:822950-823024:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:822366-822463:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:821823-821855:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:821177-821305:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:820738-820907:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:820250-820361:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:820031-820126:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:819687-819812:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:818766-818861:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:818231-818326:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:817820-817972:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:817495-817590:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:816687-816776:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:815778-815880:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:815351-815508:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:815024-815185:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:814476-814535:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:813788-813952:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:813518-813604:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:812619-812699:-1:exon

GOLGA1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 87175
gene: GOLGA1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: golgin subfamily A member 1 isoform X1
translation: MFAKLKKKIAEEAAVAPRPGGNARMPRSVSKESITSVGADSGDDFASDGSSSREDLSSQLLRRNEQIRKLEVKLSDYADQIRNLQKIKEKLENALEKHQDSSMRKFQEQNEAHQASRAKMAEGMALALEKKDKEWMEKLAQVEKEKKMLQTQLQEMREQSLNLFQKRDEIDELEGFQQQEIAKVKHMLLQKEECLSRAEQELAARAQELSQAAAELQEARAKASGLSRDLQDLQQQLLQLQAHRDELMTAETNAENKITALELREQELQTVIQHLSVDLQNARVAGSGCEKRLEMLQVEHESLKVEYEQQKQKMAFELAERDRLTEQLQEKVSSLEKKLERNLSGDEHVQELLKEKAVLEQRLEESRQQVLTDRTQHSQALNQLETQNKELEEKLRIATETLKKSKEAAADQDLKIQKLQTDLEEERKHLQQQILSEKHQYDEKVTGLESQIAALEKAWELDKTTTQHRISQLEKENENLKGSKEGYESSLKQQESELNRLKNEMSSRETVSVEIAKALEETRKQREELQQQVSHLNTLIKEKDQLIDEKCDLLLKQKEELNQLSQDHEAVLLQVHQLQLDIEARQSQAVEIEETARKEIDELKLQVQECLLAREHEKNVLELEESTRALNNEHLPSPENSVVEQNGQVAAADVVQLQKDNRELEQQIAEKNKMIKQLQQRMAELKKTLQKELKIRPDSEVPELRANSEVPNASVTVTNNSDLNDSREINFEYLKHVVLKFMSCRESEVKAFHLIKAVSVLLNFSQEEENMLKETLEYKMSWFGSKPSPKGSIRPSISSPRTLWP
SIO_010081: GOLGA1
subclass of: SO_0000673
so part of: GOLGA1
location: complement(join(812619..812699,813518..813604,813782..813952,814476..814535,815024..815185,815351..815508,815778..815880,816687..816776,817495..817590,817820..817972,818231..818326,818766..818861,819687..819812,820031..820126,820250..820361,820738..820907,821177..821305,821823..821855,822366..822463,822950..823024,823837..823927,825347..825481))
location: region:812619-825481:-1
so has part: feature:825347-825481:-1:exon
so has part: feature:823837-823927:-1:exon
so has part: feature:822950-823024:-1:exon
so has part: feature:822366-822463:-1:exon
so has part: feature:821823-821855:-1:exon
so has part: feature:821177-821305:-1:exon
so has part: feature:820738-820907:-1:exon
so has part: feature:820250-820361:-1:exon
so has part: feature:820031-820126:-1:exon
so has part: feature:819687-819812:-1:exon
so has part: feature:818766-818861:-1:exon
so has part: feature:818231-818326:-1:exon
so has part: feature:817820-817972:-1:exon
so has part: feature:817495-817590:-1:exon
so has part: feature:816687-816776:-1:exon
so has part: feature:815778-815880:-1:exon
so has part: feature:815351-815508:-1:exon
so has part: feature:815024-815185:-1:exon
so has part: feature:814476-814535:-1:exon
so has part: feature:813782-813952:-1:exon
so has part: feature:813518-813604:-1:exon
so has part: feature:812619-812699:-1:exon

XP_030817642.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:825347-825481:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:823837-823927:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:822950-823024:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:822366-822463:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:821823-821855:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:821177-821305:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:820738-820907:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:820250-820361:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:820031-820126:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:819687-819812:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:818766-818861:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:818231-818326:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:817820-817972:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:817495-817590:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:816687-816776:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:815778-815880:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:815351-815508:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:815024-815185:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:814476-814535:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:813782-813952:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:813518-813604:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:812619-812699:-1:exon

SCAI
type: Gene
subclass of: SO_0000704
RO_0002162: 87175
gene: SCAI
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(831340..864681)
location: region:831340-864681:-1
so has part: feature:831340-864681:-1:exon
subclass of: SO_0000010

115911054
type: Gene
SIO_000068: ncbigene

position:831340:-1
position: 831340
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:864681:-1
position: 864681
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:831340-864681:-1:exon

SCAI
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 87175
gene: SCAI
product: suppressor of cancer cell invasion
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 10 ESTs, 3 Proteins, and 83% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_030961740.1
SIO_010081: SCAI
subclass of: SO_0000673
so part of: SCAI
location: complement(join(831340..832011,833073..833173,833254..833427,833968..834040,838217..838298,838759..838858,840916..840994,841624..841725,842281..842382,843212..843364,843989..844087,844848..844944,845603..845701,846217..846303,846911..847006,852914..853045,863913..864107,864169..864437,864553..864681))
location: region:831340-864681:-1
so has part: feature:864553-864681:-1:exon
so has part: feature:864169-864437:-1:exon
so has part: feature:863913-864107:-1:exon
so has part: feature:852914-853045:-1:exon
so has part: feature:846911-847006:-1:exon
so has part: feature:846217-846303:-1:exon
so has part: feature:845603-845701:-1:exon
so has part: feature:844848-844944:-1:exon
so has part: feature:843989-844087:-1:exon
so has part: feature:843212-843364:-1:exon
so has part: feature:842281-842382:-1:exon
so has part: feature:841624-841725:-1:exon
so has part: feature:840916-840994:-1:exon
so has part: feature:838759-838858:-1:exon
so has part: feature:838217-838298:-1:exon
so has part: feature:833968-834040:-1:exon
so has part: feature:833254-833427:-1:exon
so has part: feature:833073-833173:-1:exon
so has part: feature:831340-832011:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:864553-864681:-1:exon

position:864553:-1
position: 864553
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:864169-864437:-1:exon

position:864169:-1
position: 864169
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:864437:-1
position: 864437
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:863913-864107:-1:exon

position:863913:-1
position: 863913
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:864107:-1
position: 864107
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:852914-853045:-1:exon

position:852914:-1
position: 852914
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:853045:-1
position: 853045
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:846911-847006:-1:exon

position:846911:-1
position: 846911
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:847006:-1
position: 847006
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:846217-846303:-1:exon

position:846217:-1
position: 846217
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:846303:-1
position: 846303
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:845603-845701:-1:exon

position:845603:-1
position: 845603
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:845701:-1
position: 845701
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:844848-844944:-1:exon

position:844848:-1
position: 844848
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:844944:-1
position: 844944
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:843989-844087:-1:exon

position:843989:-1
position: 843989
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:844087:-1
position: 844087
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:843212-843364:-1:exon

position:843212:-1
position: 843212
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:843364:-1
position: 843364
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:842281-842382:-1:exon

position:842281:-1
position: 842281
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:842382:-1
position: 842382
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:841624-841725:-1:exon

position:841624:-1
position: 841624
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:841725:-1
position: 841725
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:840916-840994:-1:exon

position:840916:-1
position: 840916
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:840994:-1
position: 840994
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:838759-838858:-1:exon

position:838759:-1
position: 838759
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:838858:-1
position: 838858
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:838217-838298:-1:exon

position:838217:-1
position: 838217
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:838298:-1
position: 838298
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:833968-834040:-1:exon

position:833968:-1
position: 833968
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:834040:-1
position: 834040
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:833254-833427:-1:exon

position:833254:-1
position: 833254
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:833427:-1
position: 833427
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:833073-833173:-1:exon

position:833073:-1
position: 833073
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:833173:-1
position: 833173
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:831340-832011:-1:exon

position:832011:-1
position: 832011
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

SCAI
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 87175
gene: SCAI
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protein SCAI
translation: MAGGAGRKGGSGAGRGAVPRPDRTNARWAGGGACAPRAPAGGTLPEPGQTAAGVLTPAEVRHSYTGSDGDVMAGGAGAAAAAPRSRGRVRGRAVRAGGRAGRTDGQTDGPVSLPAAAPPPYPSSRRASPAARGLGAQPIGAHGGGAGRRGPARGGSRAPRTSAALRPRPDRDRGRDRRVRTVSGTVRQRLPRSGPASRTELALKETMSSGGAEDDIPQAERKTVTDFCYLLDKSKQLFNGLRDLPQYGQKQWQSYFGRTFDVYTKLWKFQQQHRQVLDNRYGLKRWQIGEIASKIGQLYYHYYLRTSETSYLNEAFSFYSAIRQRSYYSQVNKEDRPELVVKKLRYYARFIVVCLLLNKMDVVKDLVKELSDEIEDYTHRFNTEDQVEWNLVLQEVAAFIEADPVMVLNDDNTIVITSNRLSETGAPLLEQGMIVGQLALADALIIGNCNNQVKFSELTIDMFRMLQALEREPMNLASQMNKPGMQESTEKPARRENPHKYLLYKPTFSQLYTFLAASFKELPANSVLLIYLSATGVFPSGRSDSEGPYDFGGVLTNSNRDIINGDALHKRNQAYKEMHCLHPGDLYPFTRKPLFIIVDSSNSVAYKNFTNLFGQPLVCLLSPTAYPKALQDQSQRGSLFTLFLNNPLMAFLFVSGLSSMRRGLWEKCQDYLRKINRDIAQLLTHSRSIDQSFLQFFGDEFLRLLLTRFIFCSATMRMHKIFRQETRNYPESYPQLPRDETVENPHLQKHILELASILDVRNVFLENTLDDY
SIO_010081: SCAI
subclass of: SO_0000673
so part of: SCAI
location: complement(join(831862..832011,833073..833173,833254..833427,833968..834040,838217..838298,838759..838858,840916..840994,841624..841725,842281..842382,843212..843364,843989..844087,844848..844944,845603..845701,846217..846303,846911..847006,852914..853045,863913..864107,864169..864437,864553..864681))
location: region:831862-864681:-1
so has part: feature:864553-864681:-1:exon
so has part: feature:864169-864437:-1:exon
so has part: feature:863913-864107:-1:exon
so has part: feature:852914-853045:-1:exon
so has part: feature:846911-847006:-1:exon
so has part: feature:846217-846303:-1:exon
so has part: feature:845603-845701:-1:exon
so has part: feature:844848-844944:-1:exon
so has part: feature:843989-844087:-1:exon
so has part: feature:843212-843364:-1:exon
so has part: feature:842281-842382:-1:exon
so has part: feature:841624-841725:-1:exon
so has part: feature:840916-840994:-1:exon
so has part: feature:838759-838858:-1:exon
so has part: feature:838217-838298:-1:exon
so has part: feature:833968-834040:-1:exon
so has part: feature:833254-833427:-1:exon
so has part: feature:833073-833173:-1:exon
so has part: feature:831862-832011:-1:exon

XP_030817600.1
type: Protein
SIO_000068: ncbiprotein

position:831862:-1
position: 831862
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:864553-864681:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:864169-864437:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:863913-864107:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:852914-853045:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:846911-847006:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:846217-846303:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:845603-845701:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:844848-844944:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:843989-844087:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:843212-843364:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:842281-842382:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:841624-841725:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:840916-840994:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:838759-838858:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:838217-838298:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:833968-834040:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:833254-833427:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:833073-833173:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:831862-832011:-1:exon

RPL35
type: Gene
subclass of: SO_0000704
RO_0002162: 87175
gene: RPL35
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 864463..866384
location: region:864463-866384:1
so has part: feature:864463-866384:1:exon
subclass of: SO_0000010

115910811
type: Gene
SIO_000068: ncbigene

position:864463:1
position: 864463
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:866384:1
position: 866384
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:864463-866384:1:exon

RPL35
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 87175
gene: RPL35
product: ribosomal protein L35
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 3 ESTs, 14 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
transcript id: XM_030961270.1
SIO_010081: RPL35
subclass of: SO_0000673
so part of: RPL35
location: join(864463..864682,864994..865130,865492..865573,866179..866384)
location: region:864463-866384:1
so has part: feature:864463-864682:1:exon
so has part: feature:864994-865130:1:exon
so has part: feature:865492-865573:1:exon
so has part: feature:866179-866384:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:864463-864682:1:exon

position:864682:1
position: 864682
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:864994-865130:1:exon

position:864994:1
position: 864994
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:865130:1
position: 865130
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:865492-865573:1:exon

position:865492:1
position: 865492
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:865573:1
position: 865573
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:866179-866384:1:exon

position:866179:1
position: 866179
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

RPL35
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 87175
gene: RPL35
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: 60S ribosomal protein L35
translation: MAKIKARDLRGKKKEELLKQLEDLKVELSQLRVAKVTGGAASKLSKIRVVRKSIARVLTVINQTQKENLRKFYKGKKYKPLDLRPKKTRAMRRRLNKHEENLKTKKQQRKERLYPARKFAIKA
SIO_010081: RPL35
subclass of: SO_0000673
so part of: RPL35
location: join(864680..864682,864994..865130,865492..865573,866179..866328)
location: region:864680-866328:1
so has part: feature:864680-864682:1:exon
so has part: feature:864994-865130:1:exon
so has part: feature:865492-865573:1:exon
so has part: feature:866179-866328:1:exon

XP_030817130.1
type: Protein
SIO_000068: ncbiprotein

position:864680:1
position: 864680
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:866328:1
position: 866328
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:864680-864682:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:864994-865130:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:865492-865573:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:866179-866328:1:exon

OLFML2A
type: Gene
subclass of: SO_0000704
RO_0002162: 87175
gene: OLFML2A
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(872644..879892)
location: region:872644-879892:-1
so has part: feature:872644-879892:-1:exon
subclass of: SO_0000010

115910862
type: Gene
SIO_000068: ncbigene

position:872644:-1
position: 872644
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:879892:-1
position: 879892
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:872644-879892:-1:exon

OLFML2A
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 87175
gene: OLFML2A
product: olfactomedin like 2A
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 ESTs, 12 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_030961372.1
SIO_010081: OLFML2A
subclass of: SO_0000673
so part of: OLFML2A
location: complement(join(872644..873988,874220..874405,874559..874783,874891..875149,875352..875537,875650..875757,875886..876149,879762..879892))
location: region:872644-879892:-1
so has part: feature:879762-879892:-1:exon
so has part: feature:875886-876149:-1:exon
so has part: feature:875650-875757:-1:exon
so has part: feature:875352-875537:-1:exon
so has part: feature:874891-875149:-1:exon
so has part: feature:874559-874783:-1:exon
so has part: feature:874220-874405:-1:exon
so has part: feature:872644-873988:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:879762-879892:-1:exon

position:879762:-1
position: 879762
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:875886-876149:-1:exon

position:875886:-1
position: 875886
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:876149:-1
position: 876149
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:875650-875757:-1:exon

position:875650:-1
position: 875650
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:875757:-1
position: 875757
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:875352-875537:-1:exon

position:875352:-1
position: 875352
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:875537:-1
position: 875537
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:874891-875149:-1:exon

position:874891:-1
position: 874891
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:875149:-1
position: 875149
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:874559-874783:-1:exon

position:874559:-1
position: 874559
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:874783:-1
position: 874783
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:874220-874405:-1:exon

position:874220:-1
position: 874220
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:874405:-1
position: 874405
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:872644-873988:-1:exon

position:873988:-1
position: 873988
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

OLFML2A
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 87175
gene: OLFML2A
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: olfactomedin-like protein 2A
translation: MRALLLPALLLPALAAVRGAATALGDVDQVRMTSEGSDCRCKCILRPLSRDACSRVRSGSARVEDFYTVETVSSGADCRCSCTAPPSSLNPCENEWKMEKLKKQAPELFKLQAMVDLLEGTLYSMDLMKVHSYISKVAAQMNTLEETIKTNLSRENDFMKESVQHLTDQMKRYENYSDIMISIKKEISNLGYQLLQKDAAAIPESKAQDTTGGREKEAGRYPSPRKALGDRAAPRAPKEKPLKPEKPKKENTKAKAGSQPTAKPKPLAQQQTVVRGITYYKVGQGAAEGPAGSREGPVRGAAVSEQQEDRGPPPPPAEGTPAQAVAQTESAMPPSSTAVPSTAPVPRSTARSPPGQGTDSPGDPETPNRVKEAECEGTIEAVEPPREHHSYGRNEGAWMKDPAAKDDRIYVTNYYYGNSLVEFRSLDSFKQGRWSNLYKLPYNWIGTGHVVYRGAFYYNRAFTKNIIKYDLKERYVAGWAQLHDVVYEDTTPWKWRGHSDIDFAVDESGLWVIYPSVDYDYSQQEVIVLSRLDPVDLSVRKETTWKTGLKRNTYGNCFIICGILYAVDTYSQKEGQISYAFDTHTDTEAELRLPFLNHYSFTTQVDYNPKEKVLYAWDNGHQMTYGLSFVV
SIO_010081: OLFML2A
subclass of: SO_0000673
so part of: OLFML2A
location: complement(join(873387..873988,874220..874405,874559..874783,874891..875149,875352..875537,875650..875757,875886..876149,879762..879827))
location: region:873387-879827:-1
so has part: feature:879762-879827:-1:exon
so has part: feature:875886-876149:-1:exon
so has part: feature:875650-875757:-1:exon
so has part: feature:875352-875537:-1:exon
so has part: feature:874891-875149:-1:exon
so has part: feature:874559-874783:-1:exon
so has part: feature:874220-874405:-1:exon
so has part: feature:873387-873988:-1:exon

XP_030817232.1
type: Protein
SIO_000068: ncbiprotein

position:873387:-1
position: 873387
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:879827:-1
position: 879827
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:879762-879827:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:875886-876149:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:875650-875757:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:875352-875537:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:874891-875149:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:874559-874783:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:874220-874405:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:873387-873988:-1:exon

NR6A1
type: Gene
subclass of: SO_0000704
RO_0002162: 87175
gene: NR6A1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 892593..952353
location: region:892593-952353:1
so has part: feature:892593-952353:1:exon
subclass of: SO_0000010

115910793
type: Gene
SIO_000068: ncbigene

position:892593:1
position: 892593
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:952353:1
position: 952353
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:892593-952353:1:exon

NR6A1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 87175
gene: NR6A1
product: nuclear receptor subfamily 6 group A member 1, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_030961231.1
SIO_010081: NR6A1
subclass of: SO_0000673
so part of: NR6A1
location: join(892593..892638,935093..935323,937718..937773,939125..939282,940127..940354,940733..940987,944300..944421,945840..952353)
location: region:892593-952353:1
so has part: feature:892593-892638:1:exon
so has part: feature:935093-935323:1:exon
so has part: feature:937718-937773:1:exon
so has part: feature:939125-939282:1:exon
so has part: feature:940127-940354:1:exon
so has part: feature:940733-940987:1:exon
so has part: feature:944300-944421:1:exon
so has part: feature:945840-952353:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:892593-892638:1:exon

position:892638:1
position: 892638
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:935093-935323:1:exon

position:935093:1
position: 935093
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:935323:1
position: 935323
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:937718-937773:1:exon

position:937718:1
position: 937718
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:937773:1
position: 937773
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:939125-939282:1:exon

position:939125:1
position: 939125
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:939282:1
position: 939282
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:940127-940354:1:exon

position:940127:1
position: 940127
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:940354:1
position: 940354
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:940733-940987:1:exon

position:940733:1
position: 940733
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:940987:1
position: 940987
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:944300-944421:1:exon

position:944300:1
position: 944300
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:944421:1
position: 944421
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:945840-952353:1:exon

position:945840:1
position: 945840
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

NR6A1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 87175
gene: NR6A1
product: nuclear receptor subfamily 6 group A member 1, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_030961229.1
SIO_010081: NR6A1
subclass of: SO_0000673
so part of: NR6A1
location: join(892593..892638,935093..935323,937718..937773,939125..939282,940130..940354,940733..940987,944300..944421,945840..945992,946909..952353)
location: region:892593-952353:1
so has part: feature:892593-892638:1:exon
so has part: feature:935093-935323:1:exon
so has part: feature:937718-937773:1:exon
so has part: feature:939125-939282:1:exon
so has part: feature:940130-940354:1:exon
so has part: feature:940733-940987:1:exon
so has part: feature:944300-944421:1:exon
so has part: feature:945840-945992:1:exon
so has part: feature:946909-952353:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:892593-892638:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:935093-935323:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:937718-937773:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:939125-939282:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:940130-940354:1:exon

position:940130:1
position: 940130
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:940733-940987:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:944300-944421:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:945840-945992:1:exon

position:945992:1
position: 945992
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:946909-952353:1:exon

position:946909:1
position: 946909
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

NR6A1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 87175
gene: NR6A1
product: nuclear receptor subfamily 6 group A member 1, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_030961232.1
SIO_010081: NR6A1
subclass of: SO_0000673
so part of: NR6A1
location: join(892593..892638,935093..935323,937718..937773,939125..939282,940127..940354,940733..940987,944300..945070)
location: region:892593-945070:1
so has part: feature:892593-892638:1:exon
so has part: feature:935093-935323:1:exon
so has part: feature:937718-937773:1:exon
so has part: feature:939125-939282:1:exon
so has part: feature:940127-940354:1:exon
so has part: feature:940733-940987:1:exon
so has part: feature:944300-945070:1:exon

position:945070:1
position: 945070
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:892593-892638:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:935093-935323:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:937718-937773:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:939125-939282:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:940127-940354:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:940733-940987:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:944300-945070:1:exon

NR6A1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 87175
gene: NR6A1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: nuclear receptor subfamily 6 group A member 1 isoform X1
translation: MSSSSPVLPVNSVGNERVDQRTCLICGDRATGLHYGIISCEGCKGFFKRSICNKRVYRCSRDKNCVMSRKQRNRCQYCRLLKCLQMGMNRKAIREDGMPGGRNKSIGPVQISEEEIERIMSGQEFEGEANMSWSNNGDSDHSSPGNGVSESNQPSPVSTPSSRSVELNGFAALRDQYLGTPVSTHYQYLPHLFSYSAHSALVAPQPRSLEPQSHGLISQLLCAEDLEPLSTPMLIEDGYKVTQAELFALLCRLADELLFRQIAWIKKLPFFCELSIKDYTCLLSSTWQELILLSSLTVYSKQIFGDLADVTSKYSPSDDELHRFSEEGMEVMERLIYLFRKFNQLKVSNEEYACMKAINFLNQDIRGLTNASQLEQLNKRYWYVCQDFTEYKYPHQPNRFPDLMMCLPEIRYIAGKMVNVPLEQLPLLFKAVLHSCKTSVSKE
SIO_010081: NR6A1
subclass of: SO_0000673
so part of: NR6A1
location: join(892596..892638,935093..935323,937718..937773,939125..939282,940130..940354,940733..940987,944300..944421,945840..945992,946909..946997)
location: region:892596-946997:1
so has part: feature:892596-892638:1:exon
so has part: feature:935093-935323:1:exon
so has part: feature:937718-937773:1:exon
so has part: feature:939125-939282:1:exon
so has part: feature:940130-940354:1:exon
so has part: feature:940733-940987:1:exon
so has part: feature:944300-944421:1:exon
so has part: feature:945840-945992:1:exon
so has part: feature:946909-946997:1:exon

XP_030817089.1
type: Protein
SIO_000068: ncbiprotein

position:892596:1
position: 892596
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:946997:1
position: 946997
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:892596-892638:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:935093-935323:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:937718-937773:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:939125-939282:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:940130-940354:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:940733-940987:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:944300-944421:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:945840-945992:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:946909-946997:1:exon

NR6A1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 87175
gene: NR6A1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: nuclear receptor subfamily 6 group A member 1 isoform X3
translation: MSSSSPVLPVNSVGNERVDQRTCLICGDRATGLHYGIISCEGCKGFFKRSICNKRVYRCSRDKNCVMSRKQRNRCQYCRLLKCLQMGMNRKAIREDGMPGGRNKSIGPVQISEEEIERIMSGQEFEGEANMSWSNNGDSDHSSPGNGVSESNQPSPVSTPSSSRSVELNGFAALRDQYLGTPVSTHYQYLPHLFSYSAHSALVAPQPRSLEPQSHGLISQLLCAEDLEPLSTPMLIEDGYKVTQAELFALLCRLADELLFRQIAWIKKLPFFCELSIKDYTCLLSSTWQELILLSSLTVYSKQIFGDLADVTSKYSPSDDELHRFSEEGMEVMERLIYLFRKFNQLKVSNEEYACMKAINFLNQDIRGLTNASQLEQLNKRYWYVCQDFTEYKYPHQPNRFPDLMMCLPEIRYIAGNSECF
SIO_010081: NR6A1
subclass of: SO_0000673
so part of: NR6A1
location: join(892596..892638,935093..935323,937718..937773,939125..939282,940127..940354,940733..940987,944300..944421,945840..946012)
location: region:892596-946012:1
so has part: feature:892596-892638:1:exon
so has part: feature:935093-935323:1:exon
so has part: feature:937718-937773:1:exon
so has part: feature:939125-939282:1:exon
so has part: feature:940127-940354:1:exon
so has part: feature:940733-940987:1:exon
so has part: feature:944300-944421:1:exon
so has part: feature:945840-946012:1:exon

XP_030817091.1
type: Protein
SIO_000068: ncbiprotein

position:946012:1
position: 946012
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:892596-892638:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:935093-935323:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:937718-937773:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:939125-939282:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:940127-940354:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:940733-940987:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:944300-944421:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:945840-946012:1:exon

NR6A1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 87175
gene: NR6A1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: nuclear receptor subfamily 6 group A member 1 isoform X4
translation: MSSSSPVLPVNSVGNERVDQRTCLICGDRATGLHYGIISCEGCKGFFKRSICNKRVYRCSRDKNCVMSRKQRNRCQYCRLLKCLQMGMNRKAIREDGMPGGRNKSIGPVQISEEEIERIMSGQEFEGEANMSWSNNGDSDHSSPGNGVSESNQPSPVSTPSSSRSVELNGFAALRDQYLGTPVSTHYQYLPHLFSYSAHSALVAPQPRSLEPQSHGLISQLLCAEDLEPLSTPMLIEDGYKVTQAELFALLCRLADELLFRQIAWIKKLPFFCELSIKDYTCLLSSTWQELILLSSLTVYSKQIFGDLADVTSKYSPSDDELHRFSEEGMEVMERLIYLFRKFNQLKVSNEEYACMKAINFLNQGEANRSYQPHFFIFILQKVNL
SIO_010081: NR6A1
subclass of: SO_0000673
so part of: NR6A1
location: join(892596..892638,935093..935323,937718..937773,939125..939282,940127..940354,940733..940987,944300..944486)
location: region:892596-944486:1
so has part: feature:892596-892638:1:exon
so has part: feature:935093-935323:1:exon
so has part: feature:937718-937773:1:exon
so has part: feature:939125-939282:1:exon
so has part: feature:940127-940354:1:exon
so has part: feature:940733-940987:1:exon
so has part: feature:944300-944486:1:exon

XP_030817092.1
type: Protein
SIO_000068: ncbiprotein

position:944486:1
position: 944486
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:892596-892638:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:935093-935323:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:937718-937773:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:939125-939282:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:940127-940354:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:940733-940987:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:944300-944486:1:exon

NR6A1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 87175
gene: NR6A1
product: nuclear receptor subfamily 6 group A member 1, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 16 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_030961230.1
SIO_010081: NR6A1
subclass of: SO_0000673
so part of: NR6A1
location: join(928554..928662,935093..935323,937718..937773,939125..939282,940127..940354,940733..940987,944300..944421,945840..945992,946909..952353)
location: region:928554-952353:1
so has part: feature:928554-928662:1:exon
so has part: feature:935093-935323:1:exon
so has part: feature:937718-937773:1:exon
so has part: feature:939125-939282:1:exon
so has part: feature:940127-940354:1:exon
so has part: feature:940733-940987:1:exon
so has part: feature:944300-944421:1:exon
so has part: feature:945840-945992:1:exon
so has part: feature:946909-952353:1:exon

position:928554:1
position: 928554
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:928554-928662:1:exon

position:928662:1
position: 928662
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:935093-935323:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:937718-937773:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:939125-939282:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:940127-940354:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:940733-940987:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:944300-944421:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:945840-945992:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:946909-952353:1:exon

NR6A1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 87175
gene: NR6A1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: nuclear receptor subfamily 6 group A member 1 isoform X2
translation: MKRDSTCMEDERVDQRTCLICGDRATGLHYGIISCEGCKGFFKRSICNKRVYRCSRDKNCVMSRKQRNRCQYCRLLKCLQMGMNRKAIREDGMPGGRNKSIGPVQISEEEIERIMSGQEFEGEANMSWSNNGDSDHSSPGNGVSESNQPSPVSTPSSSRSVELNGFAALRDQYLGTPVSTHYQYLPHLFSYSAHSALVAPQPRSLEPQSHGLISQLLCAEDLEPLSTPMLIEDGYKVTQAELFALLCRLADELLFRQIAWIKKLPFFCELSIKDYTCLLSSTWQELILLSSLTVYSKQIFGDLADVTSKYSPSDDELHRFSEEGMEVMERLIYLFRKFNQLKVSNEEYACMKAINFLNQDIRGLTNASQLEQLNKRYWYVCQDFTEYKYPHQPNRFPDLMMCLPEIRYIAGKMVNVPLEQLPLLFKAVLHSCKTSVSKE
SIO_010081: NR6A1
subclass of: SO_0000673
so part of: NR6A1
location: join(928635..928662,935093..935323,937718..937773,939125..939282,940127..940354,940733..940987,944300..944421,945840..945992,946909..946997)
location: region:928635-946997:1
so has part: feature:928635-928662:1:exon
so has part: feature:935093-935323:1:exon
so has part: feature:937718-937773:1:exon
so has part: feature:939125-939282:1:exon
so has part: feature:940127-940354:1:exon
so has part: feature:940733-940987:1:exon
so has part: feature:944300-944421:1:exon
so has part: feature:945840-945992:1:exon
so has part: feature:946909-946997:1:exon

XP_030817090.1
type: Protein
SIO_000068: ncbiprotein

position:928635:1
position: 928635
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:928635-928662:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:935093-935323:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:937718-937773:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:939125-939282:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:940127-940354:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:940733-940987:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:944300-944421:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:945840-945992:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:946909-946997:1:exon

NR5A1
type: Gene
subclass of: SO_0000704
RO_0002162: 87175
gene: NR5A1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 956419..975400
location: region:956419-975400:1
so has part: feature:956419-975400:1:exon
subclass of: SO_0000010

115911028
type: Gene
SIO_000068: ncbigene

position:956419:1
position: 956419
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:975400:1
position: 975400
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:956419-975400:1:exon

NR5A1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 87175
gene: NR5A1
product: nuclear receptor subfamily 5 group A member 1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 mRNAs, 19 Proteins, and 63% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_030961687.1
SIO_010081: NR5A1
subclass of: SO_0000673
so part of: NR5A1
location: join(956419..956577,958613..958728,959145..959286,962794..963434,970224..970343,970866..971013,973523..975400)
location: region:956419-975400:1
so has part: feature:956419-956577:1:exon
so has part: feature:958613-958728:1:exon
so has part: feature:959145-959286:1:exon
so has part: feature:962794-963434:1:exon
so has part: feature:970224-970343:1:exon
so has part: feature:970866-971013:1:exon
so has part: feature:973523-975400:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:956419-956577:1:exon

position:956577:1
position: 956577
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:958613-958728:1:exon

position:958613:1
position: 958613
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:958728:1
position: 958728
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:959145-959286:1:exon

position:959145:1
position: 959145
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:959286:1
position: 959286
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:962794-963434:1:exon

position:962794:1
position: 962794
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:963434:1
position: 963434
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:970224-970343:1:exon

position:970224:1
position: 970224
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:970343:1
position: 970343
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:970866-971013:1:exon

position:970866:1
position: 970866
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:971013:1
position: 971013
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:973523-975400:1:exon

position:973523:1
position: 973523
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

NR5A1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 87175
gene: NR5A1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: steroidogenic factor 1
translation: MDYSYDEDLDELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNNKHYTCTESQSCKIDKTQRKRCPYCRFQKCLTVGMRLEAVRADRMRGGRNKFGPMYKRDRALKQQKKALIRANGFKLETVPQIMSPVQSDYSLSSTIHSIHAMSKPLPPNPAALTPVDYERSPYGTPALGTAVPGHAPLPGYHYPSFPNRTIKSEYPDHYTAAHEAVPAYMYPETYPSSSAPDIPELILKLLQLEPDEAQVKARILSCLQQEQGKGRHEKLSTFGLMCKMADQTLFSIVEWARSCIFFKELEVGDQMKLLQNCWSELLVFDHIYRQLQHGKEHSVLLVTGQEVDMSAIAAQAGSILNTLVMRAQELVLHLHSLQVDRHEFVCLKFLILFSLDVKYLENHTLAKDAQEKANAALLEYTVCHYPHSTDKFRQLLLWLAEVRALSLQAEEYLYHKHLSGEVPCNNLLIEMLHAKRT
SIO_010081: NR5A1
subclass of: SO_0000673
so part of: NR5A1
location: join(958627..958728,959145..959286,962794..963434,970224..970343,970866..971013,973523..973770)
location: region:958627-973770:1
so has part: feature:958627-958728:1:exon
so has part: feature:959145-959286:1:exon
so has part: feature:962794-963434:1:exon
so has part: feature:970224-970343:1:exon
so has part: feature:970866-971013:1:exon
so has part: feature:973523-973770:1:exon

XP_030817547.1
type: Protein
SIO_000068: ncbiprotein

position:958627:1
position: 958627
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:973770:1
position: 973770
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:958627-958728:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:959145-959286:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:962794-963434:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:970224-970343:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:970866-971013:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:973523-973770:1:exon

ADGRD2
type: Gene
subclass of: SO_0000704
RO_0002162: 87175
gene: ADGRD2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(976363..998101)
location: region:976363-998101:-1
so has part: feature:976363-998101:-1:exon
subclass of: SO_0000010

115911027
type: Gene
SIO_000068: ncbigene

position:976363:-1
position: 976363
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:998101:-1
position: 998101
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:976363-998101:-1:exon

ADGRD2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 87175
gene: ADGRD2
product: adhesion G protein-coupled receptor D2, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_030961686.1
SIO_010081: ADGRD2
subclass of: SO_0000673
so part of: ADGRD2
location: complement(join(976363..976677,979764..979794,981930..981988,982308..982449,982763..982816,983007..983048,985541..985661,986576..986691,987258..987391,988157..988310,988531..988633,989231..989334,989433..989559,990617..990672,990912..991017,991535..991646,991932..992066,992461..992572,992782..993063,993437..993522,994010..994108,994264..994917,995060..995290,995890..995950,996065..996142,997731..998101))
location: region:976363-998101:-1
so has part: feature:997731-998101:-1:exon
so has part: feature:996065-996142:-1:exon
so has part: feature:995890-995950:-1:exon
so has part: feature:995060-995290:-1:exon
so has part: feature:994264-994917:-1:exon
so has part: feature:994010-994108:-1:exon
so has part: feature:993437-993522:-1:exon
so has part: feature:992782-993063:-1:exon
so has part: feature:992461-992572:-1:exon
so has part: feature:991932-992066:-1:exon
so has part: feature:991535-991646:-1:exon
so has part: feature:990912-991017:-1:exon
so has part: feature:990617-990672:-1:exon
so has part: feature:989433-989559:-1:exon
so has part: feature:989231-989334:-1:exon
so has part: feature:988531-988633:-1:exon
so has part: feature:988157-988310:-1:exon
so has part: feature:987258-987391:-1:exon
so has part: feature:986576-986691:-1:exon
so has part: feature:985541-985661:-1:exon
so has part: feature:983007-983048:-1:exon
so has part: feature:982763-982816:-1:exon
so has part: feature:982308-982449:-1:exon
so has part: feature:981930-981988:-1:exon
so has part: feature:979764-979794:-1:exon
so has part: feature:976363-976677:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:997731-998101:-1:exon

position:997731:-1
position: 997731
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:996065-996142:-1:exon

position:996065:-1
position: 996065
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:996142:-1
position: 996142
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:995890-995950:-1:exon

position:995890:-1
position: 995890
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:995950:-1
position: 995950
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:995060-995290:-1:exon

position:995060:-1
position: 995060
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:995290:-1
position: 995290
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:994264-994917:-1:exon

position:994264:-1
position: 994264
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:994917:-1
position: 994917
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:994010-994108:-1:exon

position:994010:-1
position: 994010
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:994108:-1
position: 994108
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:993437-993522:-1:exon

position:993437:-1
position: 993437
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:993522:-1
position: 993522
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:992782-993063:-1:exon

position:992782:-1
position: 992782
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:993063:-1
position: 993063
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:992461-992572:-1:exon

position:992461:-1
position: 992461
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:992572:-1
position: 992572
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:991932-992066:-1:exon

position:991932:-1
position: 991932
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:992066:-1
position: 992066
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:991535-991646:-1:exon

position:991535:-1
position: 991535
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:991646:-1
position: 991646
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:990912-991017:-1:exon

position:990912:-1
position: 990912
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:991017:-1
position: 991017
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:990617-990672:-1:exon

position:990617:-1
position: 990617
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:990672:-1
position: 990672
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:989433-989559:-1:exon

position:989433:-1
position: 989433
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:989559:-1
position: 989559
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:989231-989334:-1:exon

position:989231:-1
position: 989231
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:989334:-1
position: 989334
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:988531-988633:-1:exon

position:988531:-1
position: 988531
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:988633:-1
position: 988633
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:988157-988310:-1:exon

position:988157:-1
position: 988157
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:988310:-1
position: 988310
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:987258-987391:-1:exon

position:987258:-1
position: 987258
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:987391:-1
position: 987391
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:986576-986691:-1:exon

position:986576:-1
position: 986576
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:986691:-1
position: 986691
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:985541-985661:-1:exon

position:985541:-1
position: 985541
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:985661:-1
position: 985661
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:983007-983048:-1:exon

position:983007:-1
position: 983007
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:983048:-1
position: 983048
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 22
SIO_000628: feature:982763-982816:-1:exon

position:982763:-1
position: 982763
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:982816:-1
position: 982816
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 23
SIO_000628: feature:982308-982449:-1:exon

position:982308:-1
position: 982308
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:982449:-1
position: 982449
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 24
SIO_000628: feature:981930-981988:-1:exon

position:981930:-1
position: 981930
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:981988:-1
position: 981988
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 25
SIO_000628: feature:979764-979794:-1:exon

position:979764:-1
position: 979764
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:979794:-1
position: 979794
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 26
SIO_000628: feature:976363-976677:-1:exon

position:976677:-1
position: 976677
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

ADGRD2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 87175
gene: ADGRD2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: adhesion G-protein coupled receptor D2
translation: MVRRDLRPDSCLFSFLVGLSRSLLAFAALAKNQTSQGFAPLTIETPRHTYAYVGTALDWWQADRYCEQHFAQLLLEPQDSEQGSFSKLLQSHHIRGSVWLKERDSVLHKTKRRRGHTVPVLVFRDKTDTKYVKVLSDFPALPAVTACAHLQWDTRSQDIATIFSYAVPAFINEFQLRGFVDEEGFVRFALIVHGHHSPYLPVFRADGQWHHFCVTWQQENGTWAIYADGKRRAAASGLCSVGPSAPQAISGQGTFIIGQDQDSLGGTFRAKESFSGNITDLHIWHRVLSAEHIEKVRSCWVVEQDLLFGWSSNALQVESTVQTVATQLLCPGPVEECRVLEVGSSGFSYVSCLQPLPFICHYSKDAYWQLKRAQLESSHALASRVNTLAVRTVIPDSVFSSGVQDMNLSVALDALDILAAVLREGEVPVLEPSDLLAVLQLLKQVSDLEIQEGDELEMLEQLGQYYMEVTELILEEQNTGTWSLISQVIRGPMAVVELCDRVVSLLVPLLTRERTKITIQHGNIGMEVRELELSEQQLSGEAYVVQTPEKGRHDLIEVPAEEMQRLKSRGLHRVTVKNMWFGYGSLQRCLSSSAVSPDTAAPDGAQKYLGTSVGTAVISATLLSDQQEISAAVRYRLQHRAQDLPNTLLGPVCAFWNFSLSPDAGGMWSTAGCSVAKSLPDSTACFCNHTTNFAILLQVYEMERTTKEELTLQTLTFIGCGVSFCALTVTFVLFLVVGVPKSERMTVHKNLILALAAGEALLMVSELAKPNQVLCFMVTAFLHLFFMAAFSWMLVEGLLLWSKVVAVNMSEGRRMKFYYVTGWGLPVLIVGVTLATSFNKYVAANHCWLNVQTNVIWAFVGPVLLILAVNSLVLLRVVAVTVASARRRSKMLTPSSSLESQIGAQLWATAKPVLVLLPVLGLTWLCGLLVHLSIAWAYVFIVLNSLQGLYIFLVYAVYNSEVRNAIQRMKDKKKALSFTNCSHPINYLSSPRNTTSWDTGRLSPAPETALPSPVQREPPVKNITSRGNFGARIPMGISSIMSPERPAVELTAFKCSGF
SIO_010081: ADGRD2
subclass of: SO_0000673
so part of: ADGRD2
location: complement(join(976670..976677,979764..979794,981930..981988,982308..982449,982763..982816,983007..983048,985541..985661,986576..986691,987258..987391,988157..988310,988531..988633,989231..989334,989433..989559,990617..990672,990912..991017,991535..991646,991932..992066,992461..992572,992782..993063,993437..993522,994010..994108,994264..994917,995060..995290,995890..995950,996065..996112))
location: region:976670-996112:-1
so has part: feature:996065-996112:-1:exon
so has part: feature:995890-995950:-1:exon
so has part: feature:995060-995290:-1:exon
so has part: feature:994264-994917:-1:exon
so has part: feature:994010-994108:-1:exon
so has part: feature:993437-993522:-1:exon
so has part: feature:992782-993063:-1:exon
so has part: feature:992461-992572:-1:exon
so has part: feature:991932-992066:-1:exon
so has part: feature:991535-991646:-1:exon
so has part: feature:990912-991017:-1:exon
so has part: feature:990617-990672:-1:exon
so has part: feature:989433-989559:-1:exon
so has part: feature:989231-989334:-1:exon
so has part: feature:988531-988633:-1:exon
so has part: feature:988157-988310:-1:exon
so has part: feature:987258-987391:-1:exon
so has part: feature:986576-986691:-1:exon
so has part: feature:985541-985661:-1:exon
so has part: feature:983007-983048:-1:exon
so has part: feature:982763-982816:-1:exon
so has part: feature:982308-982449:-1:exon
so has part: feature:981930-981988:-1:exon
so has part: feature:979764-979794:-1:exon
so has part: feature:976670-976677:-1:exon

XP_030817546.1
type: Protein
SIO_000068: ncbiprotein

position:976670:-1
position: 976670
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:996112:-1
position: 996112
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:996065-996112:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:995890-995950:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:995060-995290:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:994264-994917:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:994010-994108:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:993437-993522:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:992782-993063:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:992461-992572:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:991932-992066:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:991535-991646:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:990912-991017:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:990617-990672:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:989433-989559:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:989231-989334:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:988531-988633:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:988157-988310:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:987258-987391:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:986576-986691:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:985541-985661:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:983007-983048:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:982763-982816:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:982308-982449:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:981930-981988:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:979764-979794:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:976670-976677:-1:exon

ADGRD2
type: Miscellaneous RNA
subclass of: SO_0000673
RO_0002162: 87175
gene: ADGRD2
product: adhesion G protein-coupled receptor D2, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XR_004061226.1
SIO_010081: ADGRD2
so part of: ADGRD2
location: complement(join(979774..979794,981930..981988,982308..982417,983007..983048,985541..985661,986576..986691,987258..987391,988157..988310,988531..988633,989231..989334,989433..989559,990617..990672,990912..991017,991535..991646,991932..992066,992461..992572,992782..993063,993437..993522,994010..994108,994264..994917,995060..995290,995890..995950,996065..996142,997731..998101))
location: region:979774-998101:-1
so has part: feature:997731-998101:-1:exon
so has part: feature:996065-996142:-1:exon
so has part: feature:995890-995950:-1:exon
so has part: feature:995060-995290:-1:exon
so has part: feature:994264-994917:-1:exon
so has part: feature:994010-994108:-1:exon
so has part: feature:993437-993522:-1:exon
so has part: feature:992782-993063:-1:exon
so has part: feature:992461-992572:-1:exon
so has part: feature:991932-992066:-1:exon
so has part: feature:991535-991646:-1:exon
so has part: feature:990912-991017:-1:exon
so has part: feature:990617-990672:-1:exon
so has part: feature:989433-989559:-1:exon
so has part: feature:989231-989334:-1:exon
so has part: feature:988531-988633:-1:exon
so has part: feature:988157-988310:-1:exon
so has part: feature:987258-987391:-1:exon
so has part: feature:986576-986691:-1:exon
so has part: feature:985541-985661:-1:exon
so has part: feature:983007-983048:-1:exon
so has part: feature:982308-982417:-1:exon
so has part: feature:981930-981988:-1:exon
so has part: feature:979774-979794:-1:exon

position:979774:-1
position: 979774
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:997731-998101:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:996065-996142:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:995890-995950:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:995060-995290:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:994264-994917:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:994010-994108:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:993437-993522:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:992782-993063:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:992461-992572:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:991932-992066:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:991535-991646:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:990912-991017:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:990617-990672:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:989433-989559:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:989231-989334:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:988531-988633:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:988157-988310:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:987258-987391:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:986576-986691:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:985541-985661:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:983007-983048:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:982308-982417:-1:exon

position:982417:-1
position: 982417
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 23
SIO_000628: feature:981930-981988:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:979774-979794:-1:exon

PSMB7
type: Gene
subclass of: SO_0000704
RO_0002162: 87175
gene: PSMB7
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1004438..1023654
location: region:1004438-1023654:1
so has part: feature:1004438-1023654:1:exon
subclass of: SO_0000010

115910770
type: Gene
SIO_000068: ncbigene

position:1004438:1
position: 1004438
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1023654:1
position: 1023654
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1004438-1023654:1:exon

PSMB7
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 87175
gene: PSMB7
product: proteasome 20S subunit beta 7
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 8 ESTs, 8 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
transcript id: XM_030961155.1
SIO_010081: PSMB7
subclass of: SO_0000673
so part of: PSMB7
location: join(1004438..1004566,1005148..1005241,1005399..1005496,1005809..1005949,1006494..1006609,1012426..1012484,1022837..1022988,1023474..1023654)
location: region:1004438-1023654:1
so has part: feature:1004438-1004566:1:exon
so has part: feature:1005148-1005241:1:exon
so has part: feature:1005399-1005496:1:exon
so has part: feature:1005809-1005949:1:exon
so has part: feature:1006494-1006609:1:exon
so has part: feature:1012426-1012484:1:exon
so has part: feature:1022837-1022988:1:exon
so has part: feature:1023474-1023654:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1004438-1004566:1:exon

position:1004566:1
position: 1004566
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1005148-1005241:1:exon

position:1005148:1
position: 1005148
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1005241:1
position: 1005241
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1005399-1005496:1:exon

position:1005399:1
position: 1005399
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1005496:1
position: 1005496
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1005809-1005949:1:exon

position:1005809:1
position: 1005809
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1005949:1
position: 1005949
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1006494-1006609:1:exon

position:1006494:1
position: 1006494
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1006609:1
position: 1006609
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1012426-1012484:1:exon

position:1012426:1
position: 1012426
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1012484:1
position: 1012484
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1022837-1022988:1:exon

position:1022837:1
position: 1022837
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1022988:1
position: 1022988
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1023474-1023654:1:exon

position:1023474:1
position: 1023474
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

PSMB7
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 87175
gene: PSMB7
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: proteasome subunit beta type-7
translation: MAAVSVLRAPAGGFSFDNCARNSLLEAELAQKGLRVPAPRKTGTTIAGVIFKDGVVLGADTRATEGMVVADKNCSKIHFISPNIYCCGAGTAADTEMTTQLISSNLELHSLSTGRLPRVVTANRMLKQMLFRYQGYIGAALVLGGVDVTGPHLYSIHPHGSTDKLPYVTMGSGSLAAMAVFEDKYKPDMEEEEAKQLVRDAIAAGIYNDLGSGSNIDICVISKSKLDFLRPYDVANRKGDRFGRYKCEKGTTAVLTENVAHLELEVVDETVQTMDTS
SIO_010081: PSMB7
subclass of: SO_0000673
so part of: PSMB7
location: join(1004505..1004566,1005148..1005241,1005399..1005496,1005809..1005949,1006494..1006609,1012426..1012484,1022837..1022988,1023474..1023585)
location: region:1004505-1023585:1
so has part: feature:1004505-1004566:1:exon
so has part: feature:1005148-1005241:1:exon
so has part: feature:1005399-1005496:1:exon
so has part: feature:1005809-1005949:1:exon
so has part: feature:1006494-1006609:1:exon
so has part: feature:1012426-1012484:1:exon
so has part: feature:1022837-1022988:1:exon
so has part: feature:1023474-1023585:1:exon

XP_030817015.1
type: Protein
SIO_000068: ncbiprotein

position:1004505:1
position: 1004505
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1023585:1
position: 1023585
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1004505-1004566:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1005148-1005241:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1005399-1005496:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1005809-1005949:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1006494-1006609:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1012426-1012484:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1022837-1022988:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1023474-1023585:1:exon

NEK6
type: Gene
subclass of: SO_0000704
RO_0002162: 87175
gene: NEK6
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1024105..1068635)
location: region:1024105-1068635:-1
so has part: feature:1024105-1068635:-1:exon
subclass of: SO_0000010

115910768
type: Gene
SIO_000068: ncbigene

position:1024105:-1
position: 1024105
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1068635:-1
position: 1068635
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1024105-1068635:-1:exon

NEK6
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 87175
gene: NEK6
product: NIMA related kinase 6, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 16 ESTs, 18 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
transcript id: XM_030961153.1
SIO_010081: NEK6
subclass of: SO_0000673
so part of: NEK6
location: complement(join(1024105..1026116,1028813..1028926,1032524..1032618,1038709..1038816,1040058..1040166,1043349..1043459,1044528..1044590,1045484..1045624,1052633..1052754,1068531..1068635))
location: region:1024105-1068635:-1
so has part: feature:1068531-1068635:-1:exon
so has part: feature:1052633-1052754:-1:exon
so has part: feature:1045484-1045624:-1:exon
so has part: feature:1044528-1044590:-1:exon
so has part: feature:1043349-1043459:-1:exon
so has part: feature:1040058-1040166:-1:exon
so has part: feature:1038709-1038816:-1:exon
so has part: feature:1032524-1032618:-1:exon
so has part: feature:1028813-1028926:-1:exon
so has part: feature:1024105-1026116:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1068531-1068635:-1:exon

position:1068531:-1
position: 1068531
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1052633-1052754:-1:exon

position:1052633:-1
position: 1052633
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1052754:-1
position: 1052754
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1045484-1045624:-1:exon

position:1045484:-1
position: 1045484
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1045624:-1
position: 1045624
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1044528-1044590:-1:exon

position:1044528:-1
position: 1044528
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1044590:-1
position: 1044590
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1043349-1043459:-1:exon

position:1043349:-1
position: 1043349
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1043459:-1
position: 1043459
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1040058-1040166:-1:exon

position:1040058:-1
position: 1040058
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1040166:-1
position: 1040166
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1038709-1038816:-1:exon

position:1038709:-1
position: 1038709
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1038816:-1
position: 1038816
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1032524-1032618:-1:exon

position:1032524:-1
position: 1032524
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1032618:-1
position: 1032618
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:1028813-1028926:-1:exon

position:1028813:-1
position: 1028813
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1028926:-1
position: 1028926
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:1024105-1026116:-1:exon

position:1026116:-1
position: 1026116
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

NEK6
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 87175
gene: NEK6
product: NIMA related kinase 6, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 16 ESTs, 18 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
transcript id: XM_030961154.1
SIO_010081: NEK6
subclass of: SO_0000673
so part of: NEK6
location: complement(join(1024105..1026116,1028813..1028926,1032524..1032618,1038709..1038816,1040058..1040166,1043349..1043459,1044528..1044590,1045484..1045624,1052633..1052757,1068531..1068628))
location: region:1024105-1068628:-1
so has part: feature:1068531-1068628:-1:exon
so has part: feature:1052633-1052757:-1:exon
so has part: feature:1045484-1045624:-1:exon
so has part: feature:1044528-1044590:-1:exon
so has part: feature:1043349-1043459:-1:exon
so has part: feature:1040058-1040166:-1:exon
so has part: feature:1038709-1038816:-1:exon
so has part: feature:1032524-1032618:-1:exon
so has part: feature:1028813-1028926:-1:exon
so has part: feature:1024105-1026116:-1:exon

position:1068628:-1
position: 1068628
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1068531-1068628:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1052633-1052757:-1:exon

position:1052757:-1
position: 1052757
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1045484-1045624:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1044528-1044590:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1043349-1043459:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1040058-1040166:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1038709-1038816:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1032524-1032618:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1028813-1028926:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1024105-1026116:-1:exon

NEK6
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 87175
gene: NEK6
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: serine/threonine-protein kinase Nek6
translation: MEGQHNHPHHLGDQNNPLCKLPGQEFQHDPQRHLTSYPYRCTLADFQIEKKIGRGQFSEVYKATCLLDRKPVALKKVQIFEMMDAKARQDCIKEIDLLKQLNHPNIIKYLDSFIEDNELNIVLELADAGDLSQMIKYFKKQKRLIPERTVWKYFVQLCSAVEHMHSRRVMHRDIKPANVFITATGVVKLGDLGLGRFFSSKTTAAHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPFYGDKMNLFSLCQKIEQCDYPPLPAEHYSEKLRELVSMCIYPDPDQRPDIGYVHQIAKQMHVWTSST
SIO_010081: NEK6
subclass of: SO_0000673
so part of: NEK6
location: complement(join(1026006..1026116,1028813..1028926,1032524..1032618,1038709..1038816,1040058..1040166,1043349..1043459,1044528..1044590,1045484..1045624,1052633..1052725))
location: region:1026006-1052725:-1
so has part: feature:1052633-1052725:-1:exon
so has part: feature:1045484-1045624:-1:exon
so has part: feature:1044528-1044590:-1:exon
so has part: feature:1043349-1043459:-1:exon
so has part: feature:1040058-1040166:-1:exon
so has part: feature:1038709-1038816:-1:exon
so has part: feature:1032524-1032618:-1:exon
so has part: feature:1028813-1028926:-1:exon
so has part: feature:1026006-1026116:-1:exon

XP_030817013.1
type: Protein
SIO_000068: ncbiprotein

position:1026006:-1
position: 1026006
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1052725:-1
position: 1052725
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1052633-1052725:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1045484-1045624:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1044528-1044590:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1043349-1043459:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1040058-1040166:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1038709-1038816:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1032524-1032618:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1028813-1028926:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1026006-1026116:-1:exon

NEK6
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 87175
gene: NEK6
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: serine/threonine-protein kinase Nek6
translation: MEGQHNHPHHLGDQNNPLCKLPGQEFQHDPQRHLTSYPYRCTLADFQIEKKIGRGQFSEVYKATCLLDRKPVALKKVQIFEMMDAKARQDCIKEIDLLKQLNHPNIIKYLDSFIEDNELNIVLELADAGDLSQMIKYFKKQKRLIPERTVWKYFVQLCSAVEHMHSRRVMHRDIKPANVFITATGVVKLGDLGLGRFFSSKTTAAHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPFYGDKMNLFSLCQKIEQCDYPPLPAEHYSEKLRELVSMCIYPDPDQRPDIGYVHQIAKQMHVWTSST
SIO_010081: NEK6
subclass of: SO_0000673
so part of: NEK6
location: complement(join(1026006..1026116,1028813..1028926,1032524..1032618,1038709..1038816,1040058..1040166,1043349..1043459,1044528..1044590,1045484..1045624,1052633..1052725))
location: region:1026006-1052725:-1
so has part: feature:1052633-1052725:-1:exon
so has part: feature:1045484-1045624:-1:exon
so has part: feature:1044528-1044590:-1:exon
so has part: feature:1043349-1043459:-1:exon
so has part: feature:1040058-1040166:-1:exon
so has part: feature:1038709-1038816:-1:exon
so has part: feature:1032524-1032618:-1:exon
so has part: feature:1028813-1028926:-1:exon
so has part: feature:1026006-1026116:-1:exon

XP_030817014.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1052633-1052725:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1045484-1045624:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1044528-1044590:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1043349-1043459:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1040058-1040166:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1038709-1038816:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1032524-1032618:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1028813-1028926:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1026006-1026116:-1:exon

LHX2
type: Gene
subclass of: SO_0000704
RO_0002162: 87175
gene: LHX2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1162062..1195740)
location: region:1162062-1195740:-1
so has part: feature:1162062-1195740:-1:exon
subclass of: SO_0000010

115910906
type: Gene
SIO_000068: ncbigene

position:1162062:-1
position: 1162062
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1195740:-1
position: 1195740
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1162062-1195740:-1:exon

LHX2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 87175
gene: LHX2
product: LIM homeobox 2, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 12 ESTs, 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_030961447.1
SIO_010081: LHX2
subclass of: SO_0000673
so part of: LHX2
location: complement(join(1162062..1165045,1171606..1171811,1180287..1180669,1181297..1181502,1195630..1195740))
location: region:1162062-1195740:-1
so has part: feature:1195630-1195740:-1:exon
so has part: feature:1181297-1181502:-1:exon
so has part: feature:1180287-1180669:-1:exon
so has part: feature:1171606-1171811:-1:exon
so has part: feature:1162062-1165045:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1195630-1195740:-1:exon

position:1195630:-1
position: 1195630
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1181297-1181502:-1:exon

position:1181297:-1
position: 1181297
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1181502:-1
position: 1181502
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1180287-1180669:-1:exon

position:1180287:-1
position: 1180287
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1180669:-1
position: 1180669
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1171606-1171811:-1:exon

position:1171606:-1
position: 1171606
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1171811:-1
position: 1171811
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1162062-1165045:-1:exon

position:1165045:-1
position: 1165045
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LHX2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 87175
gene: LHX2
product: LIM homeobox 2, transcript variant X5
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 12 ESTs, 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_030961449.1
SIO_010081: LHX2
subclass of: SO_0000673
so part of: LHX2
location: complement(join(1162062..1165045,1171606..1171811,1180287..1180669,1181297..1181502,1195347..1195530))
location: region:1162062-1195530:-1
so has part: feature:1195347-1195530:-1:exon
so has part: feature:1181297-1181502:-1:exon
so has part: feature:1180287-1180669:-1:exon
so has part: feature:1171606-1171811:-1:exon
so has part: feature:1162062-1165045:-1:exon

position:1195530:-1
position: 1195530
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1195347-1195530:-1:exon

position:1195347:-1
position: 1195347
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1181297-1181502:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1180287-1180669:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1171606-1171811:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1162062-1165045:-1:exon

LHX2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 87175
gene: LHX2
product: LIM homeobox 2, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 12 ESTs, 10 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_030961446.1
SIO_010081: LHX2
subclass of: SO_0000673
so part of: LHX2
location: complement(join(1162062..1165045,1171606..1171811,1180287..1180669,1181297..1181499,1184237..1185212))
location: region:1162062-1185212:-1
so has part: feature:1184237-1185212:-1:exon
so has part: feature:1181297-1181499:-1:exon
so has part: feature:1180287-1180669:-1:exon
so has part: feature:1171606-1171811:-1:exon
so has part: feature:1162062-1165045:-1:exon

position:1185212:-1
position: 1185212
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1184237-1185212:-1:exon

position:1184237:-1
position: 1184237
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1181297-1181499:-1:exon

position:1181499:-1
position: 1181499
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1180287-1180669:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1171606-1171811:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1162062-1165045:-1:exon

LHX2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 87175
gene: LHX2
product: LIM homeobox 2, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 mRNAs, 13 ESTs, 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_030961445.1
SIO_010081: LHX2
subclass of: SO_0000673
so part of: LHX2
location: complement(join(1162062..1165045,1171606..1171811,1180287..1180669,1181297..1181502,1184237..1185212))
location: region:1162062-1185212:-1
so has part: feature:1184237-1185212:-1:exon
so has part: feature:1181297-1181502:-1:exon
so has part: feature:1180287-1180669:-1:exon
so has part: feature:1171606-1171811:-1:exon
so has part: feature:1162062-1165045:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1184237-1185212:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1181297-1181502:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1180287-1180669:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1171606-1171811:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1162062-1165045:-1:exon

LHX2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 87175
gene: LHX2
product: LIM homeobox 2, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 12 ESTs, 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_030961448.1
SIO_010081: LHX2
subclass of: SO_0000673
so part of: LHX2
location: complement(join(1162062..1165045,1171606..1171811,1180287..1180669,1181297..1181502,1183794..1184031))
location: region:1162062-1184031:-1
so has part: feature:1183794-1184031:-1:exon
so has part: feature:1181297-1181502:-1:exon
so has part: feature:1180287-1180669:-1:exon
so has part: feature:1171606-1171811:-1:exon
so has part: feature:1162062-1165045:-1:exon

position:1184031:-1
position: 1184031
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1183794-1184031:-1:exon

position:1183794:-1
position: 1183794
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1181297-1181502:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1180287-1180669:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1171606-1171811:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1162062-1165045:-1:exon

LHX2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 87175
gene: LHX2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: LIM/homeobox protein Lhx2 isoform X2
translation: MHGGGLRLMRVLGSCRDPDNCQQQQQLGPSSSASSAMLFHSLSGSEMHGVIDEMDRRTKSEAPAISSAIDRGETETTMPSISSDRAALCAGCGGKISDRYYLLAVDKQWHMRCLKCCECKLNLESELTCFSKDGSIYCKEDYYRRFSVQRCARCHLGISASEMVMRARDLVYHLNCFTCTTCNKMLTTGDHFGMKDNLVYCRLHFETLIQGEYQVHFNHSDVAAGKGPALGAGSANTLGLPYYNGVGTVQKGRPRKRKSPGPGADLAAYNAALSCNENDGDHLDRDQQYPSNQKTKRMRTSFKHHQLRTMKSYFAINHNPDAKDLKQLAQKTGLTKRVLQVWFQNARAKFRRNLLRQENTGVDKTSDSTLQAGTPSGPASEISNASMSPSSTPTTLTDLTNPTMPTVTSVLTSVPGSLEVHESRSPSQTTLTNLF
SIO_010081: LHX2
subclass of: SO_0000673
so part of: LHX2
location: complement(join(1164758..1165045,1171606..1171811,1180287..1180669,1181297..1181499,1184237..1184464))
location: region:1164758-1184464:-1
so has part: feature:1184237-1184464:-1:exon
so has part: feature:1181297-1181499:-1:exon
so has part: feature:1180287-1180669:-1:exon
so has part: feature:1171606-1171811:-1:exon
so has part: feature:1164758-1165045:-1:exon

XP_030817306.1
type: Protein
SIO_000068: ncbiprotein

position:1164758:-1
position: 1164758
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1184464:-1
position: 1184464
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1184237-1184464:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1181297-1181499:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1180287-1180669:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1171606-1171811:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1164758-1165045:-1:exon

LHX2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 87175
gene: LHX2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: LIM/homeobox protein Lhx2 isoform X1
translation: MHGGGLRLMRVLGSCRDPDNCQQQQQLGPSSSASSAMLFHSLSGSEMHGVIDEMDRRTKSEAPAISSAIDRGETETQTMPSISSDRAALCAGCGGKISDRYYLLAVDKQWHMRCLKCCECKLNLESELTCFSKDGSIYCKEDYYRRFSVQRCARCHLGISASEMVMRARDLVYHLNCFTCTTCNKMLTTGDHFGMKDNLVYCRLHFETLIQGEYQVHFNHSDVAAGKGPALGAGSANTLGLPYYNGVGTVQKGRPRKRKSPGPGADLAAYNAALSCNENDGDHLDRDQQYPSNQKTKRMRTSFKHHQLRTMKSYFAINHNPDAKDLKQLAQKTGLTKRVLQVWFQNARAKFRRNLLRQENTGVDKTSDSTLQAGTPSGPASEISNASMSPSSTPTTLTDLTNPTMPTVTSVLTSVPGSLEVHESRSPSQTTLTNLF
SIO_010081: LHX2
subclass of: SO_0000673
so part of: LHX2
location: complement(join(1164758..1165045,1171606..1171811,1180287..1180669,1181297..1181502,1184237..1184464))
location: region:1164758-1184464:-1
so has part: feature:1184237-1184464:-1:exon
so has part: feature:1181297-1181502:-1:exon
so has part: feature:1180287-1180669:-1:exon
so has part: feature:1171606-1171811:-1:exon
so has part: feature:1164758-1165045:-1:exon

XP_030817305.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1184237-1184464:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1181297-1181502:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1180287-1180669:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1171606-1171811:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1164758-1165045:-1:exon

LHX2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 87175
gene: LHX2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: LIM/homeobox protein Lhx2 isoform X3
translation: MPSISSDRAALCAGCGGKISDRYYLLAVDKQWHMRCLKCCECKLNLESELTCFSKDGSIYCKEDYYRRFSVQRCARCHLGISASEMVMRARDLVYHLNCFTCTTCNKMLTTGDHFGMKDNLVYCRLHFETLIQGEYQVHFNHSDVAAGKGPALGAGSANTLGLPYYNGVGTVQKGRPRKRKSPGPGADLAAYNAALSCNENDGDHLDRDQQYPSNQKTKRMRTSFKHHQLRTMKSYFAINHNPDAKDLKQLAQKTGLTKRVLQVWFQNARAKFRRNLLRQENTGVDKTSDSTLQAGTPSGPASEISNASMSPSSTPTTLTDLTNPTMPTVTSVLTSVPGSLEVHESRSPSQTTLTNLF
SIO_010081: LHX2
subclass of: SO_0000673
so part of: LHX2
location: complement(join(1164758..1165045,1171606..1171811,1180287..1180669,1181297..1181496))
location: region:1164758-1181496:-1
so has part: feature:1181297-1181496:-1:exon
so has part: feature:1180287-1180669:-1:exon
so has part: feature:1171606-1171811:-1:exon
so has part: feature:1164758-1165045:-1:exon

XP_030817307.1
type: Protein
SIO_000068: ncbiprotein

position:1181496:-1
position: 1181496
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1181297-1181496:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1180287-1180669:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1171606-1171811:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1164758-1165045:-1:exon

LHX2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 87175
gene: LHX2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: LIM/homeobox protein Lhx2 isoform X3
translation: MPSISSDRAALCAGCGGKISDRYYLLAVDKQWHMRCLKCCECKLNLESELTCFSKDGSIYCKEDYYRRFSVQRCARCHLGISASEMVMRARDLVYHLNCFTCTTCNKMLTTGDHFGMKDNLVYCRLHFETLIQGEYQVHFNHSDVAAGKGPALGAGSANTLGLPYYNGVGTVQKGRPRKRKSPGPGADLAAYNAALSCNENDGDHLDRDQQYPSNQKTKRMRTSFKHHQLRTMKSYFAINHNPDAKDLKQLAQKTGLTKRVLQVWFQNARAKFRRNLLRQENTGVDKTSDSTLQAGTPSGPASEISNASMSPSSTPTTLTDLTNPTMPTVTSVLTSVPGSLEVHESRSPSQTTLTNLF
SIO_010081: LHX2
subclass of: SO_0000673
so part of: LHX2
location: complement(join(1164758..1165045,1171606..1171811,1180287..1180669,1181297..1181496))
location: region:1164758-1181496:-1
so has part: feature:1181297-1181496:-1:exon
so has part: feature:1180287-1180669:-1:exon
so has part: feature:1171606-1171811:-1:exon
so has part: feature:1164758-1165045:-1:exon

XP_030817308.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1181297-1181496:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1180287-1180669:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1171606-1171811:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1164758-1165045:-1:exon

LHX2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 87175
gene: LHX2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: LIM/homeobox protein Lhx2 isoform X3
translation: MPSISSDRAALCAGCGGKISDRYYLLAVDKQWHMRCLKCCECKLNLESELTCFSKDGSIYCKEDYYRRFSVQRCARCHLGISASEMVMRARDLVYHLNCFTCTTCNKMLTTGDHFGMKDNLVYCRLHFETLIQGEYQVHFNHSDVAAGKGPALGAGSANTLGLPYYNGVGTVQKGRPRKRKSPGPGADLAAYNAALSCNENDGDHLDRDQQYPSNQKTKRMRTSFKHHQLRTMKSYFAINHNPDAKDLKQLAQKTGLTKRVLQVWFQNARAKFRRNLLRQENTGVDKTSDSTLQAGTPSGPASEISNASMSPSSTPTTLTDLTNPTMPTVTSVLTSVPGSLEVHESRSPSQTTLTNLF
SIO_010081: LHX2
subclass of: SO_0000673
so part of: LHX2
location: complement(join(1164758..1165045,1171606..1171811,1180287..1180669,1181297..1181496))
location: region:1164758-1181496:-1
so has part: feature:1181297-1181496:-1:exon
so has part: feature:1180287-1180669:-1:exon
so has part: feature:1171606-1171811:-1:exon
so has part: feature:1164758-1165045:-1:exon

XP_030817309.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1181297-1181496:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1180287-1180669:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1171606-1171811:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1164758-1165045:-1:exon

DENND1A
type: Gene
subclass of: SO_0000704
RO_0002162: 87175
gene: DENND1A
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1211846..1359496
location: region:1211846-1359496:1
so has part: feature:1211846-1359496:1:exon
subclass of: SO_0000010

115911079
type: Gene
SIO_000068: ncbigene

position:1211846:1
position: 1211846
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1359496:1
position: 1359496
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1211846-1359496:1:exon

DENND1A
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 87175
gene: DENND1A
product: DENN domain containing 1A, transcript variant X5
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 2 ESTs, 5 Proteins, and 96% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_030961780.1
SIO_010081: DENND1A
subclass of: SO_0000673
so part of: DENND1A
location: join(1211846..1211987,1217710..1217780,1241945..1241988,1256666..1256715,1259519..1259638,1275903..1275972,1276484..1276564,1278674..1278727,1282324..1282434,1284683..1284783,1290481..1290526,1299048..1299149,1305347..1305472,1326703..1326804,1327326..1327413,1327940..1327980,1328885..1328956,1330024..1330080,1334921..1335052,1341225..1341298,1343637..1343643,1345329..1345388,1349695..1349783,1353216..1353344,1355581..1355836,1356680..1359496)
location: region:1211846-1359496:1
so has part: feature:1211846-1211987:1:exon
so has part: feature:1217710-1217780:1:exon
so has part: feature:1241945-1241988:1:exon
so has part: feature:1256666-1256715:1:exon
so has part: feature:1259519-1259638:1:exon
so has part: feature:1275903-1275972:1:exon
so has part: feature:1276484-1276564:1:exon
so has part: feature:1278674-1278727:1:exon
so has part: feature:1282324-1282434:1:exon
so has part: feature:1284683-1284783:1:exon
so has part: feature:1290481-1290526:1:exon
so has part: feature:1299048-1299149:1:exon
so has part: feature:1305347-1305472:1:exon
so has part: feature:1326703-1326804:1:exon
so has part: feature:1327326-1327413:1:exon
so has part: feature:1327940-1327980:1:exon
so has part: feature:1328885-1328956:1:exon
so has part: feature:1330024-1330080:1:exon
so has part: feature:1334921-1335052:1:exon
so has part: feature:1341225-1341298:1:exon
so has part: feature:1343637-1343643:1:exon
so has part: feature:1345329-1345388:1:exon
so has part: feature:1349695-1349783:1:exon
so has part: feature:1353216-1353344:1:exon
so has part: feature:1355581-1355836:1:exon
so has part: feature:1356680-1359496:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1211846-1211987:1:exon

position:1211987:1
position: 1211987
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1217710-1217780:1:exon

position:1217710:1
position: 1217710
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1217780:1
position: 1217780
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1241945-1241988:1:exon

position:1241945:1
position: 1241945
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1241988:1
position: 1241988
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1256666-1256715:1:exon

position:1256666:1
position: 1256666
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1256715:1
position: 1256715
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1259519-1259638:1:exon

position:1259519:1
position: 1259519
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1259638:1
position: 1259638
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1275903-1275972:1:exon

position:1275903:1
position: 1275903
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1275972:1
position: 1275972
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1276484-1276564:1:exon

position:1276484:1
position: 1276484
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1276564:1
position: 1276564
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1278674-1278727:1:exon

position:1278674:1
position: 1278674
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1278727:1
position: 1278727
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:1282324-1282434:1:exon

position:1282324:1
position: 1282324
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1282434:1
position: 1282434
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:1284683-1284783:1:exon

position:1284683:1
position: 1284683
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1284783:1
position: 1284783
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:1290481-1290526:1:exon

position:1290481:1
position: 1290481
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1290526:1
position: 1290526
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:1299048-1299149:1:exon

position:1299048:1
position: 1299048
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1299149:1
position: 1299149
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:1305347-1305472:1:exon

position:1305347:1
position: 1305347
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1305472:1
position: 1305472
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:1326703-1326804:1:exon

position:1326703:1
position: 1326703
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1326804:1
position: 1326804
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:1327326-1327413:1:exon

position:1327326:1
position: 1327326
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1327413:1
position: 1327413
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:1327940-1327980:1:exon

position:1327940:1
position: 1327940
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1327980:1
position: 1327980
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:1328885-1328956:1:exon

position:1328885:1
position: 1328885
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1328956:1
position: 1328956
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:1330024-1330080:1:exon

position:1330024:1
position: 1330024
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1330080:1
position: 1330080
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:1334921-1335052:1:exon

position:1334921:1
position: 1334921
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1335052:1
position: 1335052
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:1341225-1341298:1:exon

position:1341225:1
position: 1341225
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1341298:1
position: 1341298
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:1343637-1343643:1:exon

position:1343637:1
position: 1343637
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1343643:1
position: 1343643
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 22
SIO_000628: feature:1345329-1345388:1:exon

position:1345329:1
position: 1345329
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1345388:1
position: 1345388
reference: sequence
type: ForwardStrandPosition
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urn:…
SIO_000300: 23
SIO_000628: feature:1349695-1349783:1:exon

position:1349695:1
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reference: sequence
type: ForwardStrandPosition
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position:1349783:1
position: 1349783
reference: sequence
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urn:…
SIO_000300: 24
SIO_000628: feature:1353216-1353344:1:exon

position:1353216:1
position: 1353216
reference: sequence
type: ForwardStrandPosition
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position:1353344:1
position: 1353344
reference: sequence
type: ForwardStrandPosition
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urn:…
SIO_000300: 25
SIO_000628: feature:1355581-1355836:1:exon

position:1355581:1
position: 1355581
reference: sequence
type: ForwardStrandPosition
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position:1355836:1
position: 1355836
reference: sequence
type: ForwardStrandPosition
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urn:…
SIO_000300: 26
SIO_000628: feature:1356680-1359496:1:exon

position:1356680:1
position: 1356680
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

DENND1A
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 87175
gene: DENND1A
product: DENN domain containing 1A, transcript variant X6
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 2 ESTs, 7 Proteins, and 98% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_030961781.1
SIO_010081: DENND1A
subclass of: SO_0000673
so part of: DENND1A
location: join(1211846..1211987,1217710..1217780,1241945..1241988,1256666..1256715,1259519..1259638,1275903..1275972,1276484..1276564,1278674..1278727,1282324..1282434,1284683..1284783,1290481..1290526,1299048..1299149,1305347..1305472,1326703..1326804,1327326..1327413,1327940..1327980,1328885..1328956,1330024..1330080,1334921..1335052,1345329..1345388,1349695..1349783,1353216..1353344,1355581..1355836,1356680..1359496)
location: region:1211846-1359496:1
so has part: feature:1211846-1211987:1:exon
so has part: feature:1217710-1217780:1:exon
so has part: feature:1241945-1241988:1:exon
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urn:…
SIO_000300: 1
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urn:…
SIO_000300: 2
SIO_000628: feature:1217710-1217780:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1241945-1241988:1:exon

urn:…
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SIO_000300: 5
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SIO_000300: 6
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urn:…
SIO_000300: 7
SIO_000628: feature:1276484-1276564:1:exon

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SIO_000300: 8
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SIO_000300: 9
SIO_000628: feature:1282324-1282434:1:exon

urn:…
SIO_000300: 10
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SIO_000300: 11
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urn:…
SIO_000300: 12
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urn:…
SIO_000300: 13
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urn:…
SIO_000300: 14
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urn:…
SIO_000300: 15
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urn:…
SIO_000300: 16
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urn:…
SIO_000300: 17
SIO_000628: feature:1328885-1328956:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:1330024-1330080:1:exon

urn:…
SIO_000300: 19
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urn:…
SIO_000300: 20
SIO_000628: feature:1345329-1345388:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:1349695-1349783:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:1353216-1353344:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:1355581-1355836:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:1356680-1359496:1:exon

DENND1A
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 87175
gene: DENND1A
product: DENN domain containing 1A, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 2 ESTs, 5 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XM_030961775.1
SIO_010081: DENND1A
subclass of: SO_0000673
so part of: DENND1A
location: join(1211846..1211987,1217710..1217780,1241945..1241988,1256666..1256715,1259519..1259638,1275903..1275972,1276484..1276564,1278674..1278727,1282324..1282434,1284683..1284783,1290481..1290526,1299048..1299149,1305347..1305472,1326703..1326804,1327326..1327413,1327940..1327980,1328885..1328956,1330024..1330080,1334921..1335052,1345329..1345388,1349695..1349783,1355581..1355836,1356680..1359496)
location: region:1211846-1359496:1
so has part: feature:1211846-1211987:1:exon
so has part: feature:1217710-1217780:1:exon
so has part: feature:1241945-1241988:1:exon
so has part: feature:1256666-1256715:1:exon
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so has part: feature:1275903-1275972:1:exon
so has part: feature:1276484-1276564:1:exon
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so has part: feature:1327326-1327413:1:exon
so has part: feature:1327940-1327980:1:exon
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so has part: feature:1345329-1345388:1:exon
so has part: feature:1349695-1349783:1:exon
so has part: feature:1355581-1355836:1:exon
so has part: feature:1356680-1359496:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1211846-1211987:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1217710-1217780:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1241945-1241988:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1256666-1256715:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1259519-1259638:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1275903-1275972:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1276484-1276564:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1278674-1278727:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1282324-1282434:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1284683-1284783:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1290481-1290526:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1299048-1299149:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1305347-1305472:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1326703-1326804:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1327326-1327413:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1327940-1327980:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1328885-1328956:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:1330024-1330080:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:1334921-1335052:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:1345329-1345388:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:1349695-1349783:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:1355581-1355836:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:1356680-1359496:1:exon

DENND1A
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 87175
gene: DENND1A
product: DENN domain containing 1A, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 2 ESTs, 5 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XM_030961776.1
SIO_010081: DENND1A
subclass of: SO_0000673
so part of: DENND1A
location: join(1211846..1211987,1217710..1217780,1241945..1241988,1256666..1256715,1259519..1259638,1275903..1275972,1276484..1276564,1278674..1278727,1282324..1282434,1284683..1284783,1290481..1290526,1299048..1299149,1305347..1305472,1326703..1326804,1327326..1327413,1327940..1327980,1328885..1328956,1330024..1330080,1334921..1335052,1345332..1345388,1349695..1349783,1355581..1355836,1356680..1359496)
location: region:1211846-1359496:1
so has part: feature:1211846-1211987:1:exon
so has part: feature:1217710-1217780:1:exon
so has part: feature:1241945-1241988:1:exon
so has part: feature:1256666-1256715:1:exon
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so has part: feature:1355581-1355836:1:exon
so has part: feature:1356680-1359496:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1211846-1211987:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1217710-1217780:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1241945-1241988:1:exon

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SIO_000300: 4
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SIO_000300: 5
SIO_000628: feature:1259519-1259638:1:exon

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SIO_000300: 6
SIO_000628: feature:1275903-1275972:1:exon

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SIO_000628: feature:1276484-1276564:1:exon

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SIO_000628: feature:1278674-1278727:1:exon

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SIO_000628: feature:1282324-1282434:1:exon

urn:…
SIO_000300: 10
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SIO_000628: feature:1290481-1290526:1:exon

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SIO_000300: 12
SIO_000628: feature:1299048-1299149:1:exon

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SIO_000300: 13
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urn:…
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SIO_000628: feature:1327326-1327413:1:exon

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SIO_000628: feature:1327940-1327980:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1328885-1328956:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:1330024-1330080:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:1334921-1335052:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:1345332-1345388:1:exon

position:1345332:1
position: 1345332
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:1349695-1349783:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:1355581-1355836:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:1356680-1359496:1:exon

DENND1A
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 87175
gene: DENND1A
product: DENN domain containing 1A, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 2 ESTs, 12 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XM_030961777.1
SIO_010081: DENND1A
subclass of: SO_0000673
so part of: DENND1A
location: join(1211846..1211987,1217710..1217780,1241945..1241988,1256666..1256715,1259519..1259638,1275903..1275972,1276484..1276564,1278674..1278727,1282324..1282434,1284683..1284783,1290481..1290526,1299048..1299149,1305347..1305472,1326703..1326804,1327326..1327413,1327940..1327980,1328885..1328956,1330024..1330080,1334921..1335052,1349695..1349783,1355581..1355836,1356680..1359496)
location: region:1211846-1359496:1
so has part: feature:1211846-1211987:1:exon
so has part: feature:1217710-1217780:1:exon
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urn:…
SIO_000300: 1
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SIO_000300: 2
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SIO_000300: 12
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urn:…
SIO_000300: 17
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SIO_000628: feature:1349695-1349783:1:exon

urn:…
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urn:…
SIO_000300: 22
SIO_000628: feature:1356680-1359496:1:exon

DENND1A
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 87175
gene: DENND1A
product: DENN domain containing 1A, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 7 Proteins, and 98% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XM_030961778.1
SIO_010081: DENND1A
subclass of: SO_0000673
so part of: DENND1A
location: join(1211846..1211987,1217710..1217780,1241945..1241988,1256666..1256715,1259519..1259638,1275903..1275972,1276484..1276564,1278674..1278727,1282324..1282434,1284683..1284783,1290481..1290526,1299048..1299149,1305347..1305472,1326703..1326804,1327326..1327413,1327940..1327980,1328885..1328956,1330024..1330080,1334921..1335052,1349695..1349787)
location: region:1211846-1349787:1
so has part: feature:1211846-1211987:1:exon
so has part: feature:1217710-1217780:1:exon
so has part: feature:1241945-1241988:1:exon
so has part: feature:1256666-1256715:1:exon
so has part: feature:1259519-1259638:1:exon
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so has part: feature:1330024-1330080:1:exon
so has part: feature:1334921-1335052:1:exon
so has part: feature:1349695-1349787:1:exon

position:1349787:1
position: 1349787
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1211846-1211987:1:exon

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SIO_000300: 2
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SIO_000628: feature:1290481-1290526:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1299048-1299149:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1305347-1305472:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1326703-1326804:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1327326-1327413:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1327940-1327980:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1328885-1328956:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:1330024-1330080:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:1334921-1335052:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:1349695-1349787:1:exon

DENND1A
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 87175
gene: DENND1A
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: DENN domain-containing protein 1A isoform X5
translation: MGSRIKQNPETTFEVYAEVTHSGVSCIGKDPEVRRQFPEGYSDQEVLQTLTKFCFPFYVDSHAINQVGQNFTFVLTDIDSKQRFGFCRLSSGAKSCFCILSYLPWFEVFYKLLNVLADYSAKGQDSQRSELLETFHKLTIPEPGTSVHLGVHSYFTVPDTRELPSIPENRNLTEYFVAVDVNNMLHLYASMLYERRILICCSKLSTLTACIHGSAAMLYPMFWQHVYIPVLPPHLLDYCCAPMPYLIGIHLSLMEKVRSMALEDVVILNVDTNTLETPFDDLQSLPNDVVSALKNRLKKVSTTTGDGVARAFLKAQAAFFGSYRNALKIEPGEPITFCEEAFVSHRSSVMRQFLQNAIQLQLFKQFIDGRLDLLNSGEGFSDVFEEEINMGEYAGSDKLYHQWLSTVRKGSGAILNTVKTKANPAMKTVYKFAKDHAKMGIKEVKNRLKQKDIAENGCSAVPEEPLPRTAPSPLPEKKDPKLREDRRPITVHFGQFHVDNVLEDLTMRFSSSCSSLESWCVKQHRLRPPRPPPPKIQRSSRPVRPPRPHVVKRPKSNIGVEGRRTSVPSPEHLVKPMRHYTVFLSEDSSDDEFQQEEDPVSGFSENFFFSAPFEWPQPYRALKESDSADGEDVGSPERAREPLPPSPLLSSKASEVNLLEDIFPSLEVEAQPQPLSQAKSLEDLRTPKEEAEQRCSFEYQRMDLGVSERSRIVPSMKLSHPYNKLWSMGHDDMAIPTKYSQSSPERPLAALGNMPPITRRPQSRDSGLAPAEKDESNPAIQGNITIPRPQGRKTPELGIVPPPPAPRASKHQAPAGSAEILTPQGRSHLVPDLIPEPFGAVSLKPEVQQSVSCSSRPSQLLCGSAGSAGMLQPERVKAEGAGNESELLLSLLDPLRTTAWPGRAPQGSAPAPAFGALPSDFVPPAAAAFAQPLGYPAPAPPPFLQPSPNPFTQTLPGALPVSLVRAPRGSFTPSLGHAYSSSFITPTAAFYPAQRPQPPMATLSMPNLFSQAPAVPAAGSLLLQSHSPSPTSSLQPACLGAPSKPRTLQVAQPSTKVDPKQTLASSLLASESPLVPARPAKGLESVLLSSKSEETKDPFEDLLKKTKQDVSPTPGKVEQLRKRWETFE
SIO_010081: DENND1A
subclass of: SO_0000673
so part of: DENND1A
location: join(1211971..1211987,1217710..1217780,1241945..1241988,1256666..1256715,1259519..1259638,1275903..1275972,1276484..1276564,1278674..1278727,1282324..1282434,1284683..1284783,1290481..1290526,1299048..1299149,1305347..1305472,1326703..1326804,1327326..1327413,1327940..1327980,1328885..1328956,1330024..1330080,1334921..1335052,1341225..1341298,1343637..1343643,1345329..1345388,1349695..1349783,1353216..1353344,1355581..1355836,1356680..1357966)
location: region:1211971-1357966:1
so has part: feature:1211971-1211987:1:exon
so has part: feature:1217710-1217780:1:exon
so has part: feature:1241945-1241988:1:exon
so has part: feature:1256666-1256715:1:exon
so has part: feature:1259519-1259638:1:exon
so has part: feature:1275903-1275972:1:exon
so has part: feature:1276484-1276564:1:exon
so has part: feature:1278674-1278727:1:exon
so has part: feature:1282324-1282434:1:exon
so has part: feature:1284683-1284783:1:exon
so has part: feature:1290481-1290526:1:exon
so has part: feature:1299048-1299149:1:exon
so has part: feature:1305347-1305472:1:exon
so has part: feature:1326703-1326804:1:exon
so has part: feature:1327326-1327413:1:exon
so has part: feature:1327940-1327980:1:exon
so has part: feature:1328885-1328956:1:exon
so has part: feature:1330024-1330080:1:exon
so has part: feature:1334921-1335052:1:exon
so has part: feature:1341225-1341298:1:exon
so has part: feature:1343637-1343643:1:exon
so has part: feature:1345329-1345388:1:exon
so has part: feature:1349695-1349783:1:exon
so has part: feature:1353216-1353344:1:exon
so has part: feature:1355581-1355836:1:exon
so has part: feature:1356680-1357966:1:exon

XP_030817640.1
type: Protein
SIO_000068: ncbiprotein

position:1211971:1
position: 1211971
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1357966:1
position: 1357966
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1211971-1211987:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1217710-1217780:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1241945-1241988:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1256666-1256715:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1259519-1259638:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1275903-1275972:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1276484-1276564:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1278674-1278727:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1282324-1282434:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1284683-1284783:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1290481-1290526:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1299048-1299149:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1305347-1305472:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1326703-1326804:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1327326-1327413:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1327940-1327980:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1328885-1328956:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:1330024-1330080:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:1334921-1335052:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:1341225-1341298:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:1343637-1343643:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:1345329-1345388:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:1349695-1349783:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:1353216-1353344:1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:1355581-1355836:1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:1356680-1357966:1:exon

DENND1A
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 87175
gene: DENND1A
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: DENN domain-containing protein 1A isoform X6
translation: MGSRIKQNPETTFEVYAEVTHSGVSCIGKDPEVRRQFPEGYSDQEVLQTLTKFCFPFYVDSHAINQVGQNFTFVLTDIDSKQRFGFCRLSSGAKSCFCILSYLPWFEVFYKLLNVLADYSAKGQDSQRSELLETFHKLTIPEPGTSVHLGVHSYFTVPDTRELPSIPENRNLTEYFVAVDVNNMLHLYASMLYERRILICCSKLSTLTACIHGSAAMLYPMFWQHVYIPVLPPHLLDYCCAPMPYLIGIHLSLMEKVRSMALEDVVILNVDTNTLETPFDDLQSLPNDVVSALKNRLKKVSTTTGDGVARAFLKAQAAFFGSYRNALKIEPGEPITFCEEAFVSHRSSVMRQFLQNAIQLQLFKQFIDGRLDLLNSGEGFSDVFEEEINMGEYAGSDKLYHQWLSTVRKGSGAILNTVKTKANPAMKTVYKFAKDHAKMGIKEVKNRLKQKDIAENGCSAVPEEPLPRTAPSPLPEKKDPKLREDRRPITVHFGQQHRLRPPRPPPPKIQRSSRPVRPPRPHVVKRPKSNIGVEGRRTSVPSPEHLVKPMRHYTVFLSEDSSDDEFQQEEDPVSGFSENFFFSAPFEWPQPYRALKESDSADGEDVGSPERAREPLPPSPLLSSKASEVNLLEDIFPSLEVEAQPQPLSQAKSLEDLRTPKEEAEQRCSFEYQRMDLGVSERSRIVPSMKLSHPYNKLWSMGHDDMAIPTKYSQSSPERPLAALGNMPPITRRPQSRDSGLAPAEKDESNPAIQGNITIPRPQGRKTPELGIVPPPPAPRASKHQAPAGSAEILTPQGRSHLVPDLIPEPFGAVSLKPEVQQSVSCSSRPSQLLCGSAGSAGMLQPERVKAEGAGNESELLLSLLDPLRTTAWPGRAPQGSAPAPAFGALPSDFVPPAAAAFAQPLGYPAPAPPPFLQPSPNPFTQTLPGALPVSLVRAPRGSFTPSLGHAYSSSFITPTAAFYPAQRPQPPMATLSMPNLFSQAPAVPAAGSLLLQSHSPSPTSSLQPACLGAPSKPRTLQVAQPSTKVDPKQTLASSLLASESPLVPARPAKGLESVLLSSKSEETKDPFEDLLKKTKQDVSPTPGKVEQLRKRWETFE
SIO_010081: DENND1A
subclass of: SO_0000673
so part of: DENND1A
location: join(1211971..1211987,1217710..1217780,1241945..1241988,1256666..1256715,1259519..1259638,1275903..1275972,1276484..1276564,1278674..1278727,1282324..1282434,1284683..1284783,1290481..1290526,1299048..1299149,1305347..1305472,1326703..1326804,1327326..1327413,1327940..1327980,1328885..1328956,1330024..1330080,1334921..1335052,1345329..1345388,1349695..1349783,1353216..1353344,1355581..1355836,1356680..1357966)
location: region:1211971-1357966:1
so has part: feature:1211971-1211987:1:exon
so has part: feature:1217710-1217780:1:exon
so has part: feature:1241945-1241988:1:exon
so has part: feature:1256666-1256715:1:exon
so has part: feature:1259519-1259638:1:exon
so has part: feature:1275903-1275972:1:exon
so has part: feature:1276484-1276564:1:exon
so has part: feature:1278674-1278727:1:exon
so has part: feature:1282324-1282434:1:exon
so has part: feature:1284683-1284783:1:exon
so has part: feature:1290481-1290526:1:exon
so has part: feature:1299048-1299149:1:exon
so has part: feature:1305347-1305472:1:exon
so has part: feature:1326703-1326804:1:exon
so has part: feature:1327326-1327413:1:exon
so has part: feature:1327940-1327980:1:exon
so has part: feature:1328885-1328956:1:exon
so has part: feature:1330024-1330080:1:exon
so has part: feature:1334921-1335052:1:exon
so has part: feature:1345329-1345388:1:exon
so has part: feature:1349695-1349783:1:exon
so has part: feature:1353216-1353344:1:exon
so has part: feature:1355581-1355836:1:exon
so has part: feature:1356680-1357966:1:exon

XP_030817641.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1211971-1211987:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1217710-1217780:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1241945-1241988:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1256666-1256715:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1259519-1259638:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1275903-1275972:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1276484-1276564:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1278674-1278727:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1282324-1282434:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1284683-1284783:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1290481-1290526:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1299048-1299149:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1305347-1305472:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1326703-1326804:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1327326-1327413:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1327940-1327980:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1328885-1328956:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:1330024-1330080:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:1334921-1335052:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:1345329-1345388:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:1349695-1349783:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:1353216-1353344:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:1355581-1355836:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:1356680-1357966:1:exon

DENND1A
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 87175
gene: DENND1A
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: DENN domain-containing protein 1A isoform X1
translation: MGSRIKQNPETTFEVYAEVTHSGVSCIGKDPEVRRQFPEGYSDQEVLQTLTKFCFPFYVDSHAINQVGQNFTFVLTDIDSKQRFGFCRLSSGAKSCFCILSYLPWFEVFYKLLNVLADYSAKGQDSQRSELLETFHKLTIPEPGTSVHLGVHSYFTVPDTRELPSIPENRNLTEYFVAVDVNNMLHLYASMLYERRILICCSKLSTLTACIHGSAAMLYPMFWQHVYIPVLPPHLLDYCCAPMPYLIGIHLSLMEKVRSMALEDVVILNVDTNTLETPFDDLQSLPNDVVSALKNRLKKVSTTTGDGVARAFLKAQAAFFGSYRNALKIEPGEPITFCEEAFVSHRSSVMRQFLQNAIQLQLFKQFIDGRLDLLNSGEGFSDVFEEEINMGEYAGSDKLYHQWLSTVRKGSGAILNTVKTKANPAMKTVYKFAKDHAKMGIKEVKNRLKQKDIAENGCSAVPEEPLPRTAPSPLPEKKDPKLREDRRPITVHFGQQHRLRPPRPPPPKIQRSSRPVRPPRPHVVKRPKSNIGVEGRRTSVPSPEQPQPYRALKESDSADGEDVGSPERAREPLPPSPLLSSKASEVNLLEDIFPSLEVEAQPQPLSQAKSLEDLRTPKEEAEQRCSFEYQRMDLGVSERSRIVPSMKLSHPYNKLWSMGHDDMAIPTKYSQSSPERPLAALGNMPPITRRPQSRDSGLAPAEKDESNPAIQGNITIPRPQGRKTPELGIVPPPPAPRASKHQAPAGSAEILTPQGRSHLVPDLIPEPFGAVSLKPEVQQSVSCSSRPSQLLCGSAGSAGMLQPERVKAEGAGNESELLLSLLDPLRTTAWPGRAPQGSAPAPAFGALPSDFVPPAAAAFAQPLGYPAPAPPPFLQPSPNPFTQTLPGALPVSLVRAPRGSFTPSLGHAYSSSFITPTAAFYPAQRPQPPMATLSMPNLFSQAPAVPAAGSLLLQSHSPSPTSSLQPACLGAPSKPRTLQVAQPSTKVDPKQTLASSLLASESPLVPARPAKGLESVLLSSKSEETKDPFEDLLKKTKQDVSPTPGKVEQLRKRWETFE
SIO_010081: DENND1A
subclass of: SO_0000673
so part of: DENND1A
location: join(1211971..1211987,1217710..1217780,1241945..1241988,1256666..1256715,1259519..1259638,1275903..1275972,1276484..1276564,1278674..1278727,1282324..1282434,1284683..1284783,1290481..1290526,1299048..1299149,1305347..1305472,1326703..1326804,1327326..1327413,1327940..1327980,1328885..1328956,1330024..1330080,1334921..1335052,1345329..1345388,1349695..1349783,1355581..1355836,1356680..1357966)
location: region:1211971-1357966:1
so has part: feature:1211971-1211987:1:exon
so has part: feature:1217710-1217780:1:exon
so has part: feature:1241945-1241988:1:exon
so has part: feature:1256666-1256715:1:exon
so has part: feature:1259519-1259638:1:exon
so has part: feature:1275903-1275972:1:exon
so has part: feature:1276484-1276564:1:exon
so has part: feature:1278674-1278727:1:exon
so has part: feature:1282324-1282434:1:exon
so has part: feature:1284683-1284783:1:exon
so has part: feature:1290481-1290526:1:exon
so has part: feature:1299048-1299149:1:exon
so has part: feature:1305347-1305472:1:exon
so has part: feature:1326703-1326804:1:exon
so has part: feature:1327326-1327413:1:exon
so has part: feature:1327940-1327980:1:exon
so has part: feature:1328885-1328956:1:exon
so has part: feature:1330024-1330080:1:exon
so has part: feature:1334921-1335052:1:exon
so has part: feature:1345329-1345388:1:exon
so has part: feature:1349695-1349783:1:exon
so has part: feature:1355581-1355836:1:exon
so has part: feature:1356680-1357966:1:exon

XP_030817635.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1211971-1211987:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1217710-1217780:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1241945-1241988:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1256666-1256715:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1259519-1259638:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1275903-1275972:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1276484-1276564:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1278674-1278727:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1282324-1282434:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1284683-1284783:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1290481-1290526:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1299048-1299149:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1305347-1305472:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1326703-1326804:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1327326-1327413:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1327940-1327980:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1328885-1328956:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:1330024-1330080:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:1334921-1335052:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:1345329-1345388:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:1349695-1349783:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:1355581-1355836:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:1356680-1357966:1:exon

DENND1A
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 87175
gene: DENND1A
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: DENN domain-containing protein 1A isoform X2
translation: MGSRIKQNPETTFEVYAEVTHSGVSCIGKDPEVRRQFPEGYSDQEVLQTLTKFCFPFYVDSHAINQVGQNFTFVLTDIDSKQRFGFCRLSSGAKSCFCILSYLPWFEVFYKLLNVLADYSAKGQDSQRSELLETFHKLTIPEPGTSVHLGVHSYFTVPDTRELPSIPENRNLTEYFVAVDVNNMLHLYASMLYERRILICCSKLSTLTACIHGSAAMLYPMFWQHVYIPVLPPHLLDYCCAPMPYLIGIHLSLMEKVRSMALEDVVILNVDTNTLETPFDDLQSLPNDVVSALKNRLKKVSTTTGDGVARAFLKAQAAFFGSYRNALKIEPGEPITFCEEAFVSHRSSVMRQFLQNAIQLQLFKQFIDGRLDLLNSGEGFSDVFEEEINMGEYAGSDKLYHQWLSTVRKGSGAILNTVKTKANPAMKTVYKFAKDHAKMGIKEVKNRLKQKDIAENGCSAVPEEPLPRTAPSPLPEKKDPKLREDRRPITVHFGQHRLRPPRPPPPKIQRSSRPVRPPRPHVVKRPKSNIGVEGRRTSVPSPEQPQPYRALKESDSADGEDVGSPERAREPLPPSPLLSSKASEVNLLEDIFPSLEVEAQPQPLSQAKSLEDLRTPKEEAEQRCSFEYQRMDLGVSERSRIVPSMKLSHPYNKLWSMGHDDMAIPTKYSQSSPERPLAALGNMPPITRRPQSRDSGLAPAEKDESNPAIQGNITIPRPQGRKTPELGIVPPPPAPRASKHQAPAGSAEILTPQGRSHLVPDLIPEPFGAVSLKPEVQQSVSCSSRPSQLLCGSAGSAGMLQPERVKAEGAGNESELLLSLLDPLRTTAWPGRAPQGSAPAPAFGALPSDFVPPAAAAFAQPLGYPAPAPPPFLQPSPNPFTQTLPGALPVSLVRAPRGSFTPSLGHAYSSSFITPTAAFYPAQRPQPPMATLSMPNLFSQAPAVPAAGSLLLQSHSPSPTSSLQPACLGAPSKPRTLQVAQPSTKVDPKQTLASSLLASESPLVPARPAKGLESVLLSSKSEETKDPFEDLLKKTKQDVSPTPGKVEQLRKRWETFE
SIO_010081: DENND1A
subclass of: SO_0000673
so part of: DENND1A
location: join(1211971..1211987,1217710..1217780,1241945..1241988,1256666..1256715,1259519..1259638,1275903..1275972,1276484..1276564,1278674..1278727,1282324..1282434,1284683..1284783,1290481..1290526,1299048..1299149,1305347..1305472,1326703..1326804,1327326..1327413,1327940..1327980,1328885..1328956,1330024..1330080,1334921..1335052,1345332..1345388,1349695..1349783,1355581..1355836,1356680..1357966)
location: region:1211971-1357966:1
so has part: feature:1211971-1211987:1:exon
so has part: feature:1217710-1217780:1:exon
so has part: feature:1241945-1241988:1:exon
so has part: feature:1256666-1256715:1:exon
so has part: feature:1259519-1259638:1:exon
so has part: feature:1275903-1275972:1:exon
so has part: feature:1276484-1276564:1:exon
so has part: feature:1278674-1278727:1:exon
so has part: feature:1282324-1282434:1:exon
so has part: feature:1284683-1284783:1:exon
so has part: feature:1290481-1290526:1:exon
so has part: feature:1299048-1299149:1:exon
so has part: feature:1305347-1305472:1:exon
so has part: feature:1326703-1326804:1:exon
so has part: feature:1327326-1327413:1:exon
so has part: feature:1327940-1327980:1:exon
so has part: feature:1328885-1328956:1:exon
so has part: feature:1330024-1330080:1:exon
so has part: feature:1334921-1335052:1:exon
so has part: feature:1345332-1345388:1:exon
so has part: feature:1349695-1349783:1:exon
so has part: feature:1355581-1355836:1:exon
so has part: feature:1356680-1357966:1:exon

XP_030817636.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1211971-1211987:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1217710-1217780:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1241945-1241988:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1256666-1256715:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1259519-1259638:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1275903-1275972:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1276484-1276564:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1278674-1278727:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1282324-1282434:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1284683-1284783:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1290481-1290526:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1299048-1299149:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1305347-1305472:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1326703-1326804:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1327326-1327413:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1327940-1327980:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1328885-1328956:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:1330024-1330080:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:1334921-1335052:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:1345332-1345388:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:1349695-1349783:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:1355581-1355836:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:1356680-1357966:1:exon

DENND1A
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 87175
gene: DENND1A
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: DENN domain-containing protein 1A isoform X3
translation: MGSRIKQNPETTFEVYAEVTHSGVSCIGKDPEVRRQFPEGYSDQEVLQTLTKFCFPFYVDSHAINQVGQNFTFVLTDIDSKQRFGFCRLSSGAKSCFCILSYLPWFEVFYKLLNVLADYSAKGQDSQRSELLETFHKLTIPEPGTSVHLGVHSYFTVPDTRELPSIPENRNLTEYFVAVDVNNMLHLYASMLYERRILICCSKLSTLTACIHGSAAMLYPMFWQHVYIPVLPPHLLDYCCAPMPYLIGIHLSLMEKVRSMALEDVVILNVDTNTLETPFDDLQSLPNDVVSALKNRLKKVSTTTGDGVARAFLKAQAAFFGSYRNALKIEPGEPITFCEEAFVSHRSSVMRQFLQNAIQLQLFKQFIDGRLDLLNSGEGFSDVFEEEINMGEYAGSDKLYHQWLSTVRKGSGAILNTVKTKANPAMKTVYKFAKDHAKMGIKEVKNRLKQKDIAENGCSAVPEEPLPRTAPSPLPEKKDPKLREDRRPITVHFGQVRPPRPHVVKRPKSNIGVEGRRTSVPSPEQPQPYRALKESDSADGEDVGSPERAREPLPPSPLLSSKASEVNLLEDIFPSLEVEAQPQPLSQAKSLEDLRTPKEEAEQRCSFEYQRMDLGVSERSRIVPSMKLSHPYNKLWSMGHDDMAIPTKYSQSSPERPLAALGNMPPITRRPQSRDSGLAPAEKDESNPAIQGNITIPRPQGRKTPELGIVPPPPAPRASKHQAPAGSAEILTPQGRSHLVPDLIPEPFGAVSLKPEVQQSVSCSSRPSQLLCGSAGSAGMLQPERVKAEGAGNESELLLSLLDPLRTTAWPGRAPQGSAPAPAFGALPSDFVPPAAAAFAQPLGYPAPAPPPFLQPSPNPFTQTLPGALPVSLVRAPRGSFTPSLGHAYSSSFITPTAAFYPAQRPQPPMATLSMPNLFSQAPAVPAAGSLLLQSHSPSPTSSLQPACLGAPSKPRTLQVAQPSTKVDPKQTLASSLLASESPLVPARPAKGLESVLLSSKSEETKDPFEDLLKKTKQDVSPTPGKVEQLRKRWETFE
SIO_010081: DENND1A
subclass of: SO_0000673
so part of: DENND1A
location: join(1211971..1211987,1217710..1217780,1241945..1241988,1256666..1256715,1259519..1259638,1275903..1275972,1276484..1276564,1278674..1278727,1282324..1282434,1284683..1284783,1290481..1290526,1299048..1299149,1305347..1305472,1326703..1326804,1327326..1327413,1327940..1327980,1328885..1328956,1330024..1330080,1334921..1335052,1349695..1349783,1355581..1355836,1356680..1357966)
location: region:1211971-1357966:1
so has part: feature:1211971-1211987:1:exon
so has part: feature:1217710-1217780:1:exon
so has part: feature:1241945-1241988:1:exon
so has part: feature:1256666-1256715:1:exon
so has part: feature:1259519-1259638:1:exon
so has part: feature:1275903-1275972:1:exon
so has part: feature:1276484-1276564:1:exon
so has part: feature:1278674-1278727:1:exon
so has part: feature:1282324-1282434:1:exon
so has part: feature:1284683-1284783:1:exon
so has part: feature:1290481-1290526:1:exon
so has part: feature:1299048-1299149:1:exon
so has part: feature:1305347-1305472:1:exon
so has part: feature:1326703-1326804:1:exon
so has part: feature:1327326-1327413:1:exon
so has part: feature:1327940-1327980:1:exon
so has part: feature:1328885-1328956:1:exon
so has part: feature:1330024-1330080:1:exon
so has part: feature:1334921-1335052:1:exon
so has part: feature:1349695-1349783:1:exon
so has part: feature:1355581-1355836:1:exon
so has part: feature:1356680-1357966:1:exon

XP_030817637.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1211971-1211987:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1217710-1217780:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1241945-1241988:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1256666-1256715:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1259519-1259638:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1275903-1275972:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1276484-1276564:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1278674-1278727:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1282324-1282434:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1284683-1284783:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1290481-1290526:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1299048-1299149:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1305347-1305472:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1326703-1326804:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1327326-1327413:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1327940-1327980:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1328885-1328956:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:1330024-1330080:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:1334921-1335052:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:1349695-1349783:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:1355581-1355836:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:1356680-1357966:1:exon

DENND1A
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 87175
gene: DENND1A
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: DENN domain-containing protein 1A isoform X4
translation: MGSRIKQNPETTFEVYAEVTHSGVSCIGKDPEVRRQFPEGYSDQEVLQTLTKFCFPFYVDSHAINQVGQNFTFVLTDIDSKQRFGFCRLSSGAKSCFCILSYLPWFEVFYKLLNVLADYSAKGQDSQRSELLETFHKLTIPEPGTSVHLGVHSYFTVPDTRELPSIPENRNLTEYFVAVDVNNMLHLYASMLYERRILICCSKLSTLTACIHGSAAMLYPMFWQHVYIPVLPPHLLDYCCAPMPYLIGIHLSLMEKVRSMALEDVVILNVDTNTLETPFDDLQSLPNDVVSALKNRLKKVSTTTGDGVARAFLKAQAAFFGSYRNALKIEPGEPITFCEEAFVSHRSSVMRQFLQNAIQLQLFKQFIDGRLDLLNSGEGFSDVFEEEINMGEYAGSDKLYHQWLSTVRKGSGAILNTVKTKANPAMKTVYKFAKDHAKMGIKEVKNRLKQKDIAENGCSAVPEEPLPRTAPSPLPEKKDPKLREDRRPITVHFGQVRPPRPHVVKRPKSNIGVEGRRTSVPSPEQ
SIO_010081: DENND1A
subclass of: SO_0000673
so part of: DENND1A
location: join(1211971..1211987,1217710..1217780,1241945..1241988,1256666..1256715,1259519..1259638,1275903..1275972,1276484..1276564,1278674..1278727,1282324..1282434,1284683..1284783,1290481..1290526,1299048..1299149,1305347..1305472,1326703..1326804,1327326..1327413,1327940..1327980,1328885..1328956,1330024..1330080,1334921..1335052,1349695..1349787)
location: region:1211971-1349787:1
so has part: feature:1211971-1211987:1:exon
so has part: feature:1217710-1217780:1:exon
so has part: feature:1241945-1241988:1:exon
so has part: feature:1256666-1256715:1:exon
so has part: feature:1259519-1259638:1:exon
so has part: feature:1275903-1275972:1:exon
so has part: feature:1276484-1276564:1:exon
so has part: feature:1278674-1278727:1:exon
so has part: feature:1282324-1282434:1:exon
so has part: feature:1284683-1284783:1:exon
so has part: feature:1290481-1290526:1:exon
so has part: feature:1299048-1299149:1:exon
so has part: feature:1305347-1305472:1:exon
so has part: feature:1326703-1326804:1:exon
so has part: feature:1327326-1327413:1:exon
so has part: feature:1327940-1327980:1:exon
so has part: feature:1328885-1328956:1:exon
so has part: feature:1330024-1330080:1:exon
so has part: feature:1334921-1335052:1:exon
so has part: feature:1349695-1349787:1:exon

XP_030817638.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1211971-1211987:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1217710-1217780:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1241945-1241988:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1256666-1256715:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1259519-1259638:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1275903-1275972:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1276484-1276564:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1278674-1278727:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1282324-1282434:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1284683-1284783:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1290481-1290526:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1299048-1299149:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1305347-1305472:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1326703-1326804:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1327326-1327413:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1327940-1327980:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1328885-1328956:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:1330024-1330080:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:1334921-1335052:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:1349695-1349787:1:exon

CRB2
type: Gene
subclass of: SO_0000704
RO_0002162: 87175
gene: CRB2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1360712..1415609)
location: region:1360712-1415609:-1
so has part: feature:1360712-1415609:-1:exon
subclass of: SO_0000010

115910776
type: Gene
SIO_000068: ncbigene

position:1360712:-1
position: 1360712
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1415609:-1
position: 1415609
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1360712-1415609:-1:exon

CRB2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 87175
gene: CRB2
product: crumbs cell polarity complex component 2, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 10 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_030961189.1
SIO_010081: CRB2
subclass of: SO_0000673
so part of: CRB2
location: complement(join(1360712..1363183,1366128..1366254,1366633..1366749,1367538..1368405,1368812..1368977,1369821..1370377,1371153..1372091,1380399..1380512,1381392..1381574,1382031..1382170,1382584..1382779,1384498..1385196,1393829..1394023))
location: region:1360712-1394023:-1
so has part: feature:1393829-1394023:-1:exon
so has part: feature:1384498-1385196:-1:exon
so has part: feature:1382584-1382779:-1:exon
so has part: feature:1382031-1382170:-1:exon
so has part: feature:1381392-1381574:-1:exon
so has part: feature:1380399-1380512:-1:exon
so has part: feature:1371153-1372091:-1:exon
so has part: feature:1369821-1370377:-1:exon
so has part: feature:1368812-1368977:-1:exon
so has part: feature:1367538-1368405:-1:exon
so has part: feature:1366633-1366749:-1:exon
so has part: feature:1366128-1366254:-1:exon
so has part: feature:1360712-1363183:-1:exon

position:1394023:-1
position: 1394023
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1393829-1394023:-1:exon

position:1393829:-1
position: 1393829
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1384498-1385196:-1:exon

position:1384498:-1
position: 1384498
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1385196:-1
position: 1385196
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1382584-1382779:-1:exon

position:1382584:-1
position: 1382584
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1382779:-1
position: 1382779
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1382031-1382170:-1:exon

position:1382031:-1
position: 1382031
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1382170:-1
position: 1382170
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1381392-1381574:-1:exon

position:1381392:-1
position: 1381392
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1381574:-1
position: 1381574
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1380399-1380512:-1:exon

position:1380399:-1
position: 1380399
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1380512:-1
position: 1380512
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1371153-1372091:-1:exon

position:1371153:-1
position: 1371153
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1372091:-1
position: 1372091
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1369821-1370377:-1:exon

position:1369821:-1
position: 1369821
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1370377:-1
position: 1370377
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:1368812-1368977:-1:exon

position:1368812:-1
position: 1368812
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1368977:-1
position: 1368977
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:1367538-1368405:-1:exon

position:1367538:-1
position: 1367538
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1368405:-1
position: 1368405
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:1366633-1366749:-1:exon

position:1366633:-1
position: 1366633
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1366749:-1
position: 1366749
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:1366128-1366254:-1:exon

position:1366128:-1
position: 1366128
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1366254:-1
position: 1366254
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:1360712-1363183:-1:exon

position:1363183:-1
position: 1363183
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

CRB2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 87175
gene: CRB2
product: crumbs cell polarity complex component 2, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 10 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_030961188.1
SIO_010081: CRB2
subclass of: SO_0000673
so part of: CRB2
location: complement(join(1360712..1363186,1366128..1366254,1366633..1366749,1367538..1368405,1368812..1368977,1369821..1370377,1371153..1372091,1380399..1380512,1381392..1381574,1382031..1382170,1382584..1382779,1384498..1385196,1393829..1394023))
location: region:1360712-1394023:-1
so has part: feature:1393829-1394023:-1:exon
so has part: feature:1384498-1385196:-1:exon
so has part: feature:1382584-1382779:-1:exon
so has part: feature:1382031-1382170:-1:exon
so has part: feature:1381392-1381574:-1:exon
so has part: feature:1380399-1380512:-1:exon
so has part: feature:1371153-1372091:-1:exon
so has part: feature:1369821-1370377:-1:exon
so has part: feature:1368812-1368977:-1:exon
so has part: feature:1367538-1368405:-1:exon
so has part: feature:1366633-1366749:-1:exon
so has part: feature:1366128-1366254:-1:exon
so has part: feature:1360712-1363186:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1393829-1394023:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1384498-1385196:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1382584-1382779:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1382031-1382170:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1381392-1381574:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1380399-1380512:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1371153-1372091:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1369821-1370377:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1368812-1368977:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1367538-1368405:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1366633-1366749:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1366128-1366254:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1360712-1363186:-1:exon

position:1363186:-1
position: 1363186
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

CRB2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 87175
gene: CRB2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protein crumbs homolog 2 isoform X3
translation: MELKKTTSRPYNAALLLPLFLLFWGTSYSENDSGCSSSPCENGGSCKDLEVGYQCTCPVEPVAYVGINCELLYDACTEHGCPAHMTCSRTPGVLEYDCVCPAGPAGAACGSVDECESSPCTDPRLECVDSPAGYSCRCRPGPSGGGCQAESSVCSSQPCLNNGTCVAAPGGFRCLCPPGFSGATCGDDIDECASGPCRNGAICRDSAGEYSCFCVPGFQGSHCEIDIDECASRPCRNHGTCLNHMDRYECQCAPGYAGVNCDTEIDECASDPCQNGALCNDHVGFYTCTCAPGYEGTQCEVDINECESQPCQSNGTCHDLINSYHCDCSDTGFEGTHCELDILECASDPCHNSATCLEGIKGYSCACWPGYTGQHCEEDVDECVTEPCHNGGLCLQRSNPAHYGTQPHFPSNFSYSQAAGFLCQCQPGFTGDTCSTNINECESQPCQNGGRCQDLVNGFLCHCPPGYSGVECAVNINECEEGPCKNGAVCEDGIADYSCHCAPGQDGITWGGKNCSVQLTGCQTHDCQNEALCIPTYQAESHGHLCQCQPGFYDTTCSTPTTFSFASRGYLLIELPEDSESRRGMGGASVSLRFRTTLPSAVLFYRGREAEYLFLELLDGVLHAELKREDVGYPLLLKGLRVDDGQWHKVEVVVHSTVQLKLWHSSCEAGVCLQSSPVPPGTAVIPQAFLNLYIGGAEDPMANNTRSQQGFVGCLEDLQVDAEAVLPADLALGESSLARPGCDRTEWCLSQPCFHGGICVDLWATFRCDCARPYGGPACSYERPAATFGLENSTSFASFTLSDSLGADFNLSFFLRSRKPDGLLLQACNGTGPCLTLYLRDGQLSIETSPMDTVTFPGNVVDGRRHLIALSFQGGSVGALQSDTVVELGQLPAQALGAGSEVFIGGHPNPNSAELWGGYFKGCLQDIQLNSHQIEFLQVENDSVPQELNRTQTGNLVNGCISDDTCQSEPCQNGGRCIVTWNDFHCSCPANFTGKFCEEKVWCESDPCPKGTTCTDVVAGYVCLANATFNSYAAIEFTTNTSVTRTLSSLHVDFRTRDEDAVLLWAVEEVDSLQVAIKNSSLLVDIRSGNSIEGVSFVSPQPVTDGAWHSVSVSMEEPAALSSRWLLRWDGSVNVTLQGSAGNLDFLKNNASVVLAENFTGCLGRVQIGGIFLPFPPQQPYPQAEQFLQAGPGSVRLGCSGADVCASSPCLNGGTCQDLFDAFRCGCSAGWAGPRCEANIDDCQPSPCVHGDCVDAVADFQCECFRGFIGKRCDINVDDCVRHQCLNGATCVDGIYGYSCRCPPQYSGPRCEWPFPPQQCGKNFTCLNGGRCITESWGANCSCRPGFTGRNCQININECDPNPCQNGGTCQDSENRYECVCSASFTGERCDINRVWAHLSHSSVVGAVGAAGAALLLALAVATAIAMKRRRATQGTYSPSRQEKDGARVEMWNVIKMPPTERLI
SIO_010081: CRB2
subclass of: SO_0000673
so part of: CRB2
location: complement(join(1362968..1363183,1366128..1366254,1366633..1366749,1367538..1368405,1368812..1368977,1369821..1370377,1371153..1372091,1380399..1380512,1381392..1381574,1382031..1382170,1382584..1382779,1384498..1385196,1393829..1393901))
location: region:1362968-1393901:-1
so has part: feature:1393829-1393901:-1:exon
so has part: feature:1384498-1385196:-1:exon
so has part: feature:1382584-1382779:-1:exon
so has part: feature:1382031-1382170:-1:exon
so has part: feature:1381392-1381574:-1:exon
so has part: feature:1380399-1380512:-1:exon
so has part: feature:1371153-1372091:-1:exon
so has part: feature:1369821-1370377:-1:exon
so has part: feature:1368812-1368977:-1:exon
so has part: feature:1367538-1368405:-1:exon
so has part: feature:1366633-1366749:-1:exon
so has part: feature:1366128-1366254:-1:exon
so has part: feature:1362968-1363183:-1:exon

XP_030817049.1
type: Protein
SIO_000068: ncbiprotein

position:1362968:-1
position: 1362968
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1393901:-1
position: 1393901
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1393829-1393901:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1384498-1385196:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1382584-1382779:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1382031-1382170:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1381392-1381574:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1380399-1380512:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1371153-1372091:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1369821-1370377:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1368812-1368977:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1367538-1368405:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1366633-1366749:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1366128-1366254:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1362968-1363183:-1:exon

CRB2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 87175
gene: CRB2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protein crumbs homolog 2 isoform X2
translation: MELKKTTSRPYNAALLLPLFLLFWGTSYSENDSGCSSSPCENGGSCKDLEVGYQCTCPVEPVAYVGINCELLYDACTEHGCPAHMTCSRTPGVLEYDCVCPAGPAGAACGSVDECESSPCTDPRLECVDSPAGYSCRCRPGPSGGGCQAESSVCSSQPCLNNGTCVAAPGGFRCLCPPGFSGATCGDDIDECASGPCRNGAICRDSAGEYSCFCVPGFQGSHCEIDIDECASRPCRNHGTCLNHMDRYECQCAPGYAGVNCDTEIDECASDPCQNGALCNDHVGFYTCTCAPGYEGTQCEVDINECESQPCQSNGTCHDLINSYHCDCSDTGFEGTHCELDILECASDPCHNSATCLEGIKGYSCACWPGYTGQHCEEDVDECVTEPCHNGGLCLQRSNPAHYGTQPHFPSNFSYSQAAGFLCQCQPGFTGDTCSTNINECESQPCQNGGRCQDLVNGFLCHCPPGYSGVECAVNINECEEGPCKNGAVCEDGIADYSCHCAPGQDGITWGGKNCSVQLTGCQTHDCQNEALCIPTYQAESHGHLCQCQPGFYDTTCSTPTTFSFASRGYLLIELPEDSESRRGMGGASVSLRFRTTLPSAVLFYRGREAEYLFLELLDGVLHAELKREDVGYPLLLKGLRVDDGQWHKVEVVVHSTVQLKLWHSSCEAGVCLQSSPVPPGTAVIPQAFLNLYIGGAEDPMANNTRSQQGFVGCLEDLQVDAEAVLPADLALGESSLARPGCDRTEWCLSQPCFHGGICVDLWATFRCDCARPYGGPACSYERPAATFGLENSTSFASFTLSDSLGADFNLSFFLRSRKPDGLLLQACNGTGPCLTLYLRDGQLSIETSPMDTVTFPGNVVDGRRHLIALSFQGGSVGALQSDTVVELGQLPAQALGAGSEVFIGGHPNPNSAELWGGYFKGCLQDIQLNSHQIEFLQVENDSVPQELNRTQTGNLVNGCISDDTCQSEPCQNGGRCIVTWNDFHCSCPANFTGKFCEEKVWCESDPCPKGTTCTDVVAGYVCLANATFNSYAAIEFTTNTSVTRTLSSLHVDFRTRDEDAVLLWAVEEVDSLQVAIKNSSLLVDIRSGNSIEGVSFVSPQPVTDGAWHSVSVSMEEPAALSSRWLLRWDGSVNVTLQGSAGNLDFLKNNASVVLAENFTGCLGRVQIGGIFLPFPPQQPYPQAEQFLQAGPGSVRLGCSGADVCASSPCLNGGTCQDLFDAFRCGCSAGWAGPRCEANIDDCQPSPCVHGDCVDAVADFQCECFRGFIGKRCDINVDDCVRHQCLNGATCVDGIYGYSCRCPPQYSGPRCEWPFPPQQCGKNFTCLNGGRCITESWGANCSCRPGFTGRNCQININECDPNPCQNGGTCQDSENRYECVCSASFTGERCDINQRVWAHLSHSSVVGAVGAAGAALLLALAVATAIAMKRRRATQGTYSPSRQEKDGARVEMWNVIKMPPTERLI
SIO_010081: CRB2
subclass of: SO_0000673
so part of: CRB2
location: complement(join(1362968..1363186,1366128..1366254,1366633..1366749,1367538..1368405,1368812..1368977,1369821..1370377,1371153..1372091,1380399..1380512,1381392..1381574,1382031..1382170,1382584..1382779,1384498..1385196,1393829..1393901))
location: region:1362968-1393901:-1
so has part: feature:1393829-1393901:-1:exon
so has part: feature:1384498-1385196:-1:exon
so has part: feature:1382584-1382779:-1:exon
so has part: feature:1382031-1382170:-1:exon
so has part: feature:1381392-1381574:-1:exon
so has part: feature:1380399-1380512:-1:exon
so has part: feature:1371153-1372091:-1:exon
so has part: feature:1369821-1370377:-1:exon
so has part: feature:1368812-1368977:-1:exon
so has part: feature:1367538-1368405:-1:exon
so has part: feature:1366633-1366749:-1:exon
so has part: feature:1366128-1366254:-1:exon
so has part: feature:1362968-1363186:-1:exon

XP_030817048.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1393829-1393901:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1384498-1385196:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1382584-1382779:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1382031-1382170:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1381392-1381574:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1380399-1380512:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1371153-1372091:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1369821-1370377:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1368812-1368977:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1367538-1368405:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1366633-1366749:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1366128-1366254:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1362968-1363186:-1:exon

CRB2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 87175
gene: CRB2
product: crumbs cell polarity complex component 2, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 14 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_030961190.1
SIO_010081: CRB2
subclass of: SO_0000673
so part of: CRB2
location: complement(join(1363046..1364256,1366128..1366254,1366633..1366749,1367538..1368405,1368812..1368977,1369821..1370377,1371153..1372091,1380399..1380512,1381392..1381574,1382031..1382170,1382584..1382779,1384498..1385196,1415485..1415609))
location: region:1363046-1415609:-1
so has part: feature:1415485-1415609:-1:exon
so has part: feature:1384498-1385196:-1:exon
so has part: feature:1382584-1382779:-1:exon
so has part: feature:1382031-1382170:-1:exon
so has part: feature:1381392-1381574:-1:exon
so has part: feature:1380399-1380512:-1:exon
so has part: feature:1371153-1372091:-1:exon
so has part: feature:1369821-1370377:-1:exon
so has part: feature:1368812-1368977:-1:exon
so has part: feature:1367538-1368405:-1:exon
so has part: feature:1366633-1366749:-1:exon
so has part: feature:1366128-1366254:-1:exon
so has part: feature:1363046-1364256:-1:exon

position:1363046:-1
position: 1363046
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1415485-1415609:-1:exon

position:1415485:-1
position: 1415485
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1384498-1385196:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1382584-1382779:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1382031-1382170:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1381392-1381574:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1380399-1380512:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1371153-1372091:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1369821-1370377:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1368812-1368977:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1367538-1368405:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1366633-1366749:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1366128-1366254:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1363046-1364256:-1:exon

position:1364256:-1
position: 1364256
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

CRB2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 87175
gene: CRB2
product: crumbs cell polarity complex component 2, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 16 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_030961187.1
SIO_010081: CRB2
subclass of: SO_0000673
so part of: CRB2
location: complement(join(1363046..1364256,1366128..1366254,1366633..1366749,1367538..1368405,1368812..1368977,1369821..1370377,1371153..1372091,1380399..1380512,1381392..1381574,1382031..1382170,1382584..1382779,1384498..1385196,1393829..1394023))
location: region:1363046-1394023:-1
so has part: feature:1393829-1394023:-1:exon
so has part: feature:1384498-1385196:-1:exon
so has part: feature:1382584-1382779:-1:exon
so has part: feature:1382031-1382170:-1:exon
so has part: feature:1381392-1381574:-1:exon
so has part: feature:1380399-1380512:-1:exon
so has part: feature:1371153-1372091:-1:exon
so has part: feature:1369821-1370377:-1:exon
so has part: feature:1368812-1368977:-1:exon
so has part: feature:1367538-1368405:-1:exon
so has part: feature:1366633-1366749:-1:exon
so has part: feature:1366128-1366254:-1:exon
so has part: feature:1363046-1364256:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1393829-1394023:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1384498-1385196:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1382584-1382779:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1382031-1382170:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1381392-1381574:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1380399-1380512:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1371153-1372091:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1369821-1370377:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1368812-1368977:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1367538-1368405:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1366633-1366749:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1366128-1366254:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1363046-1364256:-1:exon

CRB2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 87175
gene: CRB2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protein crumbs homolog 2 isoform X1
translation: MELKKTTSRPYNAALLLPLFLLFWGTSYSENDSGCSSSPCENGGSCKDLEVGYQCTCPVEPVAYVGINCELLYDACTEHGCPAHMTCSRTPGVLEYDCVCPAGPAGAACGSVDECESSPCTDPRLECVDSPAGYSCRCRPGPSGGGCQAESSVCSSQPCLNNGTCVAAPGGFRCLCPPGFSGATCGDDIDECASGPCRNGAICRDSAGEYSCFCVPGFQGSHCEIDIDECASRPCRNHGTCLNHMDRYECQCAPGYAGVNCDTEIDECASDPCQNGALCNDHVGFYTCTCAPGYEGTQCEVDINECESQPCQSNGTCHDLINSYHCDCSDTGFEGTHCELDILECASDPCHNSATCLEGIKGYSCACWPGYTGQHCEEDVDECVTEPCHNGGLCLQRSNPAHYGTQPHFPSNFSYSQAAGFLCQCQPGFTGDTCSTNINECESQPCQNGGRCQDLVNGFLCHCPPGYSGVECAVNINECEEGPCKNGAVCEDGIADYSCHCAPGQDGITWGGKNCSVQLTGCQTHDCQNEALCIPTYQAESHGHLCQCQPGFYDTTCSTPTTFSFASRGYLLIELPEDSESRRGMGGASVSLRFRTTLPSAVLFYRGREAEYLFLELLDGVLHAELKREDVGYPLLLKGLRVDDGQWHKVEVVVHSTVQLKLWHSSCEAGVCLQSSPVPPGTAVIPQAFLNLYIGGAEDPMANNTRSQQGFVGCLEDLQVDAEAVLPADLALGESSLARPGCDRTEWCLSQPCFHGGICVDLWATFRCDCARPYGGPACSYERPAATFGLENSTSFASFTLSDSLGADFNLSFFLRSRKPDGLLLQACNGTGPCLTLYLRDGQLSIETSPMDTVTFPGNVVDGRRHLIALSFQGGSVGALQSDTVVELGQLPAQALGAGSEVFIGGHPNPNSAELWGGYFKGCLQDIQLNSHQIEFLQVENDSVPQELNRTQTGNLVNGCISDDTCQSEPCQNGGRCIVTWNDFHCSCPANFTGKFCEEKVWCESDPCPKGTTCTDVVAGYVCLANATFNSYAAIEFTTNTSVTRTLSSLHVDFRTRDEDAVLLWAVEEVDSLQVAIKNSSLLVDIRSGNSIEGVSFVSPQPVTDGAWHSVSVSMEEPAALSSRWLLRWDGSVNVTLQGSAGNLDFLKNNASVVLAENFTGCLGRVQIGGIFLPFPPQQPYPQAEQFLQAGPGSVRLGCSGADVCASSPCLNGGTCQDLFDAFRCGCSAGWAGPRCEANIDDCQPSPCVHGDCVDAVADFQCECFRGFIGKRCDINVDDCVRHQCLNGATCVDGIYGYSCRCPPQYSGPRCEWPFPPQQCGKNFTCLNGGRCITESWGANCSCRPGFTGRNCQININECDPNPCQNGGTCQDSENRYECVCSASFTGERCDINKGTPGALFPSPLIEVAVPVACGSVLLLSIALIFMVLTARKRRQSEGTYSPSQQEVAGARLEMDSVLKVPPEERLI
SIO_010081: CRB2
subclass of: SO_0000673
so part of: CRB2
location: complement(join(1364029..1364256,1366128..1366254,1366633..1366749,1367538..1368405,1368812..1368977,1369821..1370377,1371153..1372091,1380399..1380512,1381392..1381574,1382031..1382170,1382584..1382779,1384498..1385196,1393829..1393901))
location: region:1364029-1393901:-1
so has part: feature:1393829-1393901:-1:exon
so has part: feature:1384498-1385196:-1:exon
so has part: feature:1382584-1382779:-1:exon
so has part: feature:1382031-1382170:-1:exon
so has part: feature:1381392-1381574:-1:exon
so has part: feature:1380399-1380512:-1:exon
so has part: feature:1371153-1372091:-1:exon
so has part: feature:1369821-1370377:-1:exon
so has part: feature:1368812-1368977:-1:exon
so has part: feature:1367538-1368405:-1:exon
so has part: feature:1366633-1366749:-1:exon
so has part: feature:1366128-1366254:-1:exon
so has part: feature:1364029-1364256:-1:exon

XP_030817047.1
type: Protein
SIO_000068: ncbiprotein

position:1364029:-1
position: 1364029
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1393829-1393901:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1384498-1385196:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1382584-1382779:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1382031-1382170:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1381392-1381574:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1380399-1380512:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1371153-1372091:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1369821-1370377:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1368812-1368977:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1367538-1368405:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1366633-1366749:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1366128-1366254:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1364029-1364256:-1:exon

CRB2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 87175
gene: CRB2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protein crumbs homolog 2 isoform X4
translation: MTCSRTPGVLEYDCVCPAGPAGAACGSVDECESSPCTDPRLECVDSPAGYSCRCRPGPSGGGCQAESSVCSSQPCLNNGTCVAAPGGFRCLCPPGFSGATCGDDIDECASGPCRNGAICRDSAGEYSCFCVPGFQGSHCEIDIDECASRPCRNHGTCLNHMDRYECQCAPGYAGVNCDTEIDECASDPCQNGALCNDHVGFYTCTCAPGYEGTQCEVDINECESQPCQSNGTCHDLINSYHCDCSDTGFEGTHCELDILECASDPCHNSATCLEGIKGYSCACWPGYTGQHCEEDVDECVTEPCHNGGLCLQRSNPAHYGTQPHFPSNFSYSQAAGFLCQCQPGFTGDTCSTNINECESQPCQNGGRCQDLVNGFLCHCPPGYSGVECAVNINECEEGPCKNGAVCEDGIADYSCHCAPGQDGITWGGKNCSVQLTGCQTHDCQNEALCIPTYQAESHGHLCQCQPGFYDTTCSTPTTFSFASRGYLLIELPEDSESRRGMGGASVSLRFRTTLPSAVLFYRGREAEYLFLELLDGVLHAELKREDVGYPLLLKGLRVDDGQWHKVEVVVHSTVQLKLWHSSCEAGVCLQSSPVPPGTAVIPQAFLNLYIGGAEDPMANNTRSQQGFVGCLEDLQVDAEAVLPADLALGESSLARPGCDRTEWCLSQPCFHGGICVDLWATFRCDCARPYGGPACSYERPAATFGLENSTSFASFTLSDSLGADFNLSFFLRSRKPDGLLLQACNGTGPCLTLYLRDGQLSIETSPMDTVTFPGNVVDGRRHLIALSFQGGSVGALQSDTVVELGQLPAQALGAGSEVFIGGHPNPNSAELWGGYFKGCLQDIQLNSHQIEFLQVENDSVPQELNRTQTGNLVNGCISDDTCQSEPCQNGGRCIVTWNDFHCSCPANFTGKFCEEKVWCESDPCPKGTTCTDVVAGYVCLANATFNSYAAIEFTTNTSVTRTLSSLHVDFRTRDEDAVLLWAVEEVDSLQVAIKNSSLLVDIRSGNSIEGVSFVSPQPVTDGAWHSVSVSMEEPAALSSRWLLRWDGSVNVTLQGSAGNLDFLKNNASVVLAENFTGCLGRVQIGGIFLPFPPQQPYPQAEQFLQAGPGSVRLGCSGADVCASSPCLNGGTCQDLFDAFRCGCSAGWAGPRCEANIDDCQPSPCVHGDCVDAVADFQCECFRGFIGKRCDINVDDCVRHQCLNGATCVDGIYGYSCRCPPQYSGPRCEWPFPPQQCGKNFTCLNGGRCITESWGANCSCRPGFTGRNCQININECDPNPCQNGGTCQDSENRYECVCSASFTGERCDINKGTPGALFPSPLIEVAVPVACGSVLLLSIALIFMVLTARKRRQSEGTYSPSQQEVAGARLEMDSVLKVPPEERLI
SIO_010081: CRB2
subclass of: SO_0000673
so part of: CRB2
location: complement(join(1364029..1364256,1366128..1366254,1366633..1366749,1367538..1368405,1368812..1368977,1369821..1370377,1371153..1372091,1380399..1380512,1381392..1381574,1382031..1382170,1382584..1382779,1384498..1385017))
location: region:1364029-1385017:-1
so has part: feature:1384498-1385017:-1:exon
so has part: feature:1382584-1382779:-1:exon
so has part: feature:1382031-1382170:-1:exon
so has part: feature:1381392-1381574:-1:exon
so has part: feature:1380399-1380512:-1:exon
so has part: feature:1371153-1372091:-1:exon
so has part: feature:1369821-1370377:-1:exon
so has part: feature:1368812-1368977:-1:exon
so has part: feature:1367538-1368405:-1:exon
so has part: feature:1366633-1366749:-1:exon
so has part: feature:1366128-1366254:-1:exon
so has part: feature:1364029-1364256:-1:exon

XP_030817050.1
type: Protein
SIO_000068: ncbiprotein

position:1385017:-1
position: 1385017
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1384498-1385017:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1382584-1382779:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1382031-1382170:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1381392-1381574:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1380399-1380512:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1371153-1372091:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1369821-1370377:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1368812-1368977:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1367538-1368405:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1366633-1366749:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1366128-1366254:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1364029-1364256:-1:exon

STRBP
type: Gene
subclass of: SO_0000704
RO_0002162: 87175
gene: STRBP
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1415306..1474735
location: region:1415306-1474735:1
so has part: feature:1415306-1474735:1:exon
subclass of: SO_0000010

115910777
type: Gene
SIO_000068: ncbigene

position:1415306:1
position: 1415306
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1474735:1
position: 1474735
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1415306-1474735:1:exon

STRBP
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 87175
gene: STRBP
product: spermatid perinuclear RNA binding protein, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 12 ESTs, 4 Proteins, and 94% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_030961193.1
SIO_010081: STRBP
subclass of: SO_0000673
so part of: STRBP
location: join(1415306..1415519,1437823..1437998,1440104..1440321,1441085..1441250,1442959..1443103,1448354..1448448,1448857..1448952,1449704..1449815,1450397..1450494,1450955..1451066,1451775..1451867,1452712..1452911,1454892..1455053,1455826..1455960,1456496..1456636,1457193..1457316,1459191..1459372)
location: region:1415306-1459372:1
so has part: feature:1415306-1415519:1:exon
so has part: feature:1437823-1437998:1:exon
so has part: feature:1440104-1440321:1:exon
so has part: feature:1441085-1441250:1:exon
so has part: feature:1442959-1443103:1:exon
so has part: feature:1448354-1448448:1:exon
so has part: feature:1448857-1448952:1:exon
so has part: feature:1449704-1449815:1:exon
so has part: feature:1450397-1450494:1:exon
so has part: feature:1450955-1451066:1:exon
so has part: feature:1451775-1451867:1:exon
so has part: feature:1452712-1452911:1:exon
so has part: feature:1454892-1455053:1:exon
so has part: feature:1455826-1455960:1:exon
so has part: feature:1456496-1456636:1:exon
so has part: feature:1457193-1457316:1:exon
so has part: feature:1459191-1459372:1:exon

position:1459372:1
position: 1459372
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1415306-1415519:1:exon

position:1415519:1
position: 1415519
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1437823-1437998:1:exon

position:1437823:1
position: 1437823
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1437998:1
position: 1437998
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1440104-1440321:1:exon

position:1440104:1
position: 1440104
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1440321:1
position: 1440321
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1441085-1441250:1:exon

position:1441085:1
position: 1441085
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1441250:1
position: 1441250
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1442959-1443103:1:exon

position:1442959:1
position: 1442959
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1443103:1
position: 1443103
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1448354-1448448:1:exon

position:1448354:1
position: 1448354
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1448448:1
position: 1448448
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1448857-1448952:1:exon

position:1448857:1
position: 1448857
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1448952:1
position: 1448952
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1449704-1449815:1:exon

position:1449704:1
position: 1449704
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1449815:1
position: 1449815
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:1450397-1450494:1:exon

position:1450397:1
position: 1450397
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1450494:1
position: 1450494
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:1450955-1451066:1:exon

position:1450955:1
position: 1450955
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1451066:1
position: 1451066
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:1451775-1451867:1:exon

position:1451775:1
position: 1451775
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1451867:1
position: 1451867
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:1452712-1452911:1:exon

position:1452712:1
position: 1452712
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1452911:1
position: 1452911
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:1454892-1455053:1:exon

position:1454892:1
position: 1454892
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1455053:1
position: 1455053
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:1455826-1455960:1:exon

position:1455826:1
position: 1455826
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1455960:1
position: 1455960
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:1456496-1456636:1:exon

position:1456496:1
position: 1456496
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1456636:1
position: 1456636
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:1457193-1457316:1:exon

position:1457193:1
position: 1457193
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1457316:1
position: 1457316
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:1459191-1459372:1:exon

position:1459191:1
position: 1459191
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

STRBP
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 87175
gene: STRBP
product: spermatid perinuclear RNA binding protein, transcript variant X5
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 30 ESTs, 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XM_030961196.1
SIO_010081: STRBP
subclass of: SO_0000673
so part of: STRBP
location: join(1415886..1415942,1437823..1437998,1440104..1440321,1441085..1441250,1442959..1443103,1448354..1448448,1448857..1448952,1449704..1449815,1450397..1450494,1450955..1451066,1451775..1451867,1452712..1452911,1454892..1455053,1455826..1455960,1456496..1456636,1457193..1457316,1459191..1459235,1461750..1474735)
location: region:1415886-1474735:1
so has part: feature:1415886-1415942:1:exon
so has part: feature:1437823-1437998:1:exon
so has part: feature:1440104-1440321:1:exon
so has part: feature:1441085-1441250:1:exon
so has part: feature:1442959-1443103:1:exon
so has part: feature:1448354-1448448:1:exon
so has part: feature:1448857-1448952:1:exon
so has part: feature:1449704-1449815:1:exon
so has part: feature:1450397-1450494:1:exon
so has part: feature:1450955-1451066:1:exon
so has part: feature:1451775-1451867:1:exon
so has part: feature:1452712-1452911:1:exon
so has part: feature:1454892-1455053:1:exon
so has part: feature:1455826-1455960:1:exon
so has part: feature:1456496-1456636:1:exon
so has part: feature:1457193-1457316:1:exon
so has part: feature:1459191-1459235:1:exon
so has part: feature:1461750-1474735:1:exon

position:1415886:1
position: 1415886
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1415886-1415942:1:exon

position:1415942:1
position: 1415942
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1437823-1437998:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1440104-1440321:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1441085-1441250:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1442959-1443103:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1448354-1448448:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1448857-1448952:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1449704-1449815:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1450397-1450494:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1450955-1451066:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1451775-1451867:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1452712-1452911:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1454892-1455053:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1455826-1455960:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1456496-1456636:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1457193-1457316:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1459191-1459235:1:exon

position:1459235:1
position: 1459235
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:1461750-1474735:1:exon

position:1461750:1
position: 1461750
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

STRBP
type: Miscellaneous RNA
subclass of: SO_0000673
RO_0002162: 87175
gene: STRBP
product: spermatid perinuclear RNA binding protein, transcript variant X6
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 30 ESTs, 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XR_004061214.1
SIO_010081: STRBP
so part of: STRBP
location: join(1415886..1415942,1437823..1437998,1440104..1440321,1441085..1441250,1442959..1443103,1448354..1448448,1448857..1448952,1449704..1449815,1450397..1450494,1450955..1451066,1451775..1451867,1452712..1452911,1454892..1455053,1455826..1455960,1456496..1456636,1457193..1457316,1459191..1459235,1461750..1472086,1473244..1474735)
location: region:1415886-1474735:1
so has part: feature:1415886-1415942:1:exon
so has part: feature:1437823-1437998:1:exon
so has part: feature:1440104-1440321:1:exon
so has part: feature:1441085-1441250:1:exon
so has part: feature:1442959-1443103:1:exon
so has part: feature:1448354-1448448:1:exon
so has part: feature:1448857-1448952:1:exon
so has part: feature:1449704-1449815:1:exon
so has part: feature:1450397-1450494:1:exon
so has part: feature:1450955-1451066:1:exon
so has part: feature:1451775-1451867:1:exon
so has part: feature:1452712-1452911:1:exon
so has part: feature:1454892-1455053:1:exon
so has part: feature:1455826-1455960:1:exon
so has part: feature:1456496-1456636:1:exon
so has part: feature:1457193-1457316:1:exon
so has part: feature:1459191-1459235:1:exon
so has part: feature:1461750-1472086:1:exon
so has part: feature:1473244-1474735:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1415886-1415942:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1437823-1437998:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1440104-1440321:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1441085-1441250:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1442959-1443103:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1448354-1448448:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1448857-1448952:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1449704-1449815:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1450397-1450494:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1450955-1451066:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1451775-1451867:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1452712-1452911:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1454892-1455053:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1455826-1455960:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1456496-1456636:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1457193-1457316:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1459191-1459235:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:1461750-1472086:1:exon

position:1472086:1
position: 1472086
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:1473244-1474735:1:exon

position:1473244:1
position: 1473244
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

STRBP
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 87175
gene: STRBP
product: spermatid perinuclear RNA binding protein, transcript variant X7
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 32 ESTs, 7 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XM_030961197.1
SIO_010081: STRBP
subclass of: SO_0000673
so part of: STRBP
location: join(1415886..1415942,1437823..1437998,1440104..1440321,1441085..1441250,1442959..1443103,1448357..1448448,1448857..1448952,1449704..1449815,1450397..1450494,1450955..1451066,1451775..1451867,1452712..1452911,1454892..1455053,1455826..1455960,1456496..1456636,1457193..1457316,1459191..1459235,1461750..1474735)
location: region:1415886-1474735:1
so has part: feature:1415886-1415942:1:exon
so has part: feature:1437823-1437998:1:exon
so has part: feature:1440104-1440321:1:exon
so has part: feature:1441085-1441250:1:exon
so has part: feature:1442959-1443103:1:exon
so has part: feature:1448357-1448448:1:exon
so has part: feature:1448857-1448952:1:exon
so has part: feature:1449704-1449815:1:exon
so has part: feature:1450397-1450494:1:exon
so has part: feature:1450955-1451066:1:exon
so has part: feature:1451775-1451867:1:exon
so has part: feature:1452712-1452911:1:exon
so has part: feature:1454892-1455053:1:exon
so has part: feature:1455826-1455960:1:exon
so has part: feature:1456496-1456636:1:exon
so has part: feature:1457193-1457316:1:exon
so has part: feature:1459191-1459235:1:exon
so has part: feature:1461750-1474735:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1415886-1415942:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1437823-1437998:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1440104-1440321:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1441085-1441250:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1442959-1443103:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1448357-1448448:1:exon

position:1448357:1
position: 1448357
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1448857-1448952:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1449704-1449815:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1450397-1450494:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1450955-1451066:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1451775-1451867:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1452712-1452911:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1454892-1455053:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1455826-1455960:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1456496-1456636:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1457193-1457316:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1459191-1459235:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:1461750-1474735:1:exon

STRBP
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 87175
gene: STRBP
product: spermatid perinuclear RNA binding protein, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 12 ESTs, 4 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XM_030961191.1
SIO_010081: STRBP
subclass of: SO_0000673
so part of: STRBP
location: join(1415886..1415942,1437823..1437998,1440104..1440321,1441085..1441250,1442959..1443103,1448354..1448448,1448857..1448952,1449704..1449815,1450397..1450494,1450955..1451066,1451775..1451867,1452712..1452911,1454892..1455053,1455826..1455960,1456496..1456636,1457193..1457316,1459191..1459706)
location: region:1415886-1459706:1
so has part: feature:1415886-1415942:1:exon
so has part: feature:1437823-1437998:1:exon
so has part: feature:1440104-1440321:1:exon
so has part: feature:1441085-1441250:1:exon
so has part: feature:1442959-1443103:1:exon
so has part: feature:1448354-1448448:1:exon
so has part: feature:1448857-1448952:1:exon
so has part: feature:1449704-1449815:1:exon
so has part: feature:1450397-1450494:1:exon
so has part: feature:1450955-1451066:1:exon
so has part: feature:1451775-1451867:1:exon
so has part: feature:1452712-1452911:1:exon
so has part: feature:1454892-1455053:1:exon
so has part: feature:1455826-1455960:1:exon
so has part: feature:1456496-1456636:1:exon
so has part: feature:1457193-1457316:1:exon
so has part: feature:1459191-1459706:1:exon

position:1459706:1
position: 1459706
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1415886-1415942:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1437823-1437998:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1440104-1440321:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1441085-1441250:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1442959-1443103:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1448354-1448448:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1448857-1448952:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1449704-1449815:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1450397-1450494:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1450955-1451066:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1451775-1451867:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1452712-1452911:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1454892-1455053:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1455826-1455960:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1456496-1456636:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1457193-1457316:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1459191-1459706:1:exon

STRBP
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 87175
gene: STRBP
product: spermatid perinuclear RNA binding protein, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 12 ESTs, 4 Proteins, and 94% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_030961194.1
SIO_010081: STRBP
subclass of: SO_0000673
so part of: STRBP
location: join(1416419..1416494,1437823..1437998,1440104..1440321,1441085..1441250,1442959..1443103,1448354..1448448,1448857..1448952,1449704..1449815,1450397..1450494,1450955..1451066,1451775..1451867,1452712..1452911,1454892..1455053,1455826..1455960,1456496..1456636,1457193..1457316,1459191..1459372)
location: region:1416419-1459372:1
so has part: feature:1416419-1416494:1:exon
so has part: feature:1437823-1437998:1:exon
so has part: feature:1440104-1440321:1:exon
so has part: feature:1441085-1441250:1:exon
so has part: feature:1442959-1443103:1:exon
so has part: feature:1448354-1448448:1:exon
so has part: feature:1448857-1448952:1:exon
so has part: feature:1449704-1449815:1:exon
so has part: feature:1450397-1450494:1:exon
so has part: feature:1450955-1451066:1:exon
so has part: feature:1451775-1451867:1:exon
so has part: feature:1452712-1452911:1:exon
so has part: feature:1454892-1455053:1:exon
so has part: feature:1455826-1455960:1:exon
so has part: feature:1456496-1456636:1:exon
so has part: feature:1457193-1457316:1:exon
so has part: feature:1459191-1459372:1:exon

position:1416419:1
position: 1416419
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1416419-1416494:1:exon

position:1416494:1
position: 1416494
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1437823-1437998:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1440104-1440321:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1441085-1441250:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1442959-1443103:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1448354-1448448:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1448857-1448952:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1449704-1449815:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1450397-1450494:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1450955-1451066:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1451775-1451867:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1452712-1452911:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1454892-1455053:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1455826-1455960:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1456496-1456636:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1457193-1457316:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1459191-1459372:1:exon

STRBP
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 87175
gene: STRBP
product: spermatid perinuclear RNA binding protein, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 12 ESTs, 4 Proteins, and 94% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_030961195.1
SIO_010081: STRBP
subclass of: SO_0000673
so part of: STRBP
location: join(1437555..1437574,1437823..1437998,1440104..1440321,1441085..1441250,1442959..1443103,1448354..1448448,1448857..1448952,1449704..1449815,1450397..1450494,1450955..1451066,1451775..1451867,1452712..1452911,1454892..1455053,1455826..1455960,1456496..1456636,1457193..1457316,1459191..1459372)
location: region:1437555-1459372:1
so has part: feature:1437555-1437574:1:exon
so has part: feature:1437823-1437998:1:exon
so has part: feature:1440104-1440321:1:exon
so has part: feature:1441085-1441250:1:exon
so has part: feature:1442959-1443103:1:exon
so has part: feature:1448354-1448448:1:exon
so has part: feature:1448857-1448952:1:exon
so has part: feature:1449704-1449815:1:exon
so has part: feature:1450397-1450494:1:exon
so has part: feature:1450955-1451066:1:exon
so has part: feature:1451775-1451867:1:exon
so has part: feature:1452712-1452911:1:exon
so has part: feature:1454892-1455053:1:exon
so has part: feature:1455826-1455960:1:exon
so has part: feature:1456496-1456636:1:exon
so has part: feature:1457193-1457316:1:exon
so has part: feature:1459191-1459372:1:exon

position:1437555:1
position: 1437555
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1437555-1437574:1:exon

position:1437574:1
position: 1437574
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1437823-1437998:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1440104-1440321:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1441085-1441250:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1442959-1443103:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1448354-1448448:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1448857-1448952:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1449704-1449815:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1450397-1450494:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1450955-1451066:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1451775-1451867:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1452712-1452911:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1454892-1455053:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1455826-1455960:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1456496-1456636:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1457193-1457316:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1459191-1459372:1:exon

STRBP
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 87175
gene: STRBP
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: spermatid perinuclear RNA-binding protein isoform X2
translation: MRSIRSFANDDRHVMVKHSTIYPSPEELEAVQNMVSTVECALKHVSDWMDEKNKSAKSEGDVEAKEEAAEGTAKDQGGRTLCGVMRIGLVAKGLLIKDDMDLELVLMCKEKPTKTLLCIVKDNLPAQIQKLTEEKYLVEEHVNEAAIVIHNTKEPKLTLKVILTSPLIRDEAEKKEGVDNVAMKDPPDLLDRQKCLEALASLRHAKWFQARANGLKSCVIVLRILRDLCNRVPTWAPLKGWPLELICEKSIGTCNRPLGAGEALRRVMECLASGILLPGGPGLHDPCEREPTDALSYMTVQQKEAITHSAQHALRLSAFGQIYKVLEMDPLPSNKSFQKYSWSVTDKEGTGSSALKRPFEDSVGDDKDPNKKMKRNLRKILDSKAIDLMNALMRLNQIRPGLQYKLLSQSGPVHAPVFTMSVDVDGTTYEASGPSKKTAKLHVAVKVLQAMGYPTGFDADVECVSSDEKSDTEGKNETTSSISSNNNTGNSTADTSATLEVRTQGPILTASGKNPVMELNEKRRGLKYELISETGGSHDKRFVMEVEVDGQKFRGAGPNKKVAKASAALAALEKLFSGPNAANNKKKKILPQTKGVVNTAVSAAVQAVRGRGRGALTRGAFVGAAAATGYITPGYGAPYGYSTAAPAYGLPKRMVLLPVMKFPTYPVPHYSFF
SIO_010081: STRBP
subclass of: SO_0000673
so part of: STRBP
location: join(1437996..1437998,1440104..1440321,1441085..1441250,1442959..1443103,1448354..1448448,1448857..1448952,1449704..1449815,1450397..1450494,1450955..1451066,1451775..1451867,1452712..1452911,1454892..1455053,1455826..1455960,1456496..1456636,1457193..1457316,1459191..1459235,1461750..1461826)
location: region:1437996-1461826:1
so has part: feature:1437996-1437998:1:exon
so has part: feature:1440104-1440321:1:exon
so has part: feature:1441085-1441250:1:exon
so has part: feature:1442959-1443103:1:exon
so has part: feature:1448354-1448448:1:exon
so has part: feature:1448857-1448952:1:exon
so has part: feature:1449704-1449815:1:exon
so has part: feature:1450397-1450494:1:exon
so has part: feature:1450955-1451066:1:exon
so has part: feature:1451775-1451867:1:exon
so has part: feature:1452712-1452911:1:exon
so has part: feature:1454892-1455053:1:exon
so has part: feature:1455826-1455960:1:exon
so has part: feature:1456496-1456636:1:exon
so has part: feature:1457193-1457316:1:exon
so has part: feature:1459191-1459235:1:exon
so has part: feature:1461750-1461826:1:exon

XP_030817056.1
type: Protein
SIO_000068: ncbiprotein

position:1437996:1
position: 1437996
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1461826:1
position: 1461826
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1437996-1437998:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1440104-1440321:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1441085-1441250:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1442959-1443103:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1448354-1448448:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1448857-1448952:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1449704-1449815:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1450397-1450494:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1450955-1451066:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1451775-1451867:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1452712-1452911:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1454892-1455053:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1455826-1455960:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1456496-1456636:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1457193-1457316:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1459191-1459235:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1461750-1461826:1:exon

STRBP
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 87175
gene: STRBP
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: spermatid perinuclear RNA-binding protein isoform X3
translation: MRSIRSFANDDRHVMVKHSTIYPSPEELEAVQNMVSTVECALKHVSDWMDEKNKSAKSEGDVEAKEEAAEGTAKDQGGRTLCGVMRIGLVAKGLLIKDDMDLELVLMCKEKPTKTLLCIVKDNLPAQIQKLTEEKYLVEEHVNEAAIVIHNTKEPKLTLKVILTSPLIRDEAEKKEGDNVAMKDPPDLLDRQKCLEALASLRHAKWFQARANGLKSCVIVLRILRDLCNRVPTWAPLKGWPLELICEKSIGTCNRPLGAGEALRRVMECLASGILLPGGPGLHDPCEREPTDALSYMTVQQKEAITHSAQHALRLSAFGQIYKVLEMDPLPSNKSFQKYSWSVTDKEGTGSSALKRPFEDSVGDDKDPNKKMKRNLRKILDSKAIDLMNALMRLNQIRPGLQYKLLSQSGPVHAPVFTMSVDVDGTTYEASGPSKKTAKLHVAVKVLQAMGYPTGFDADVECVSSDEKSDTEGKNETTSSISSNNNTGNSTADTSATLEVRTQGPILTASGKNPVMELNEKRRGLKYELISETGGSHDKRFVMEVEVDGQKFRGAGPNKKVAKASAALAALEKLFSGPNAANNKKKKILPQTKGVVNTAVSAAVQAVRGRGRGALTRGAFVGAAAATGYITPGYGAPYGYSTAAPAYGLPKRMVLLPVMKFPTYPVPHYSFF
SIO_010081: STRBP
subclass of: SO_0000673
so part of: STRBP
location: join(1437996..1437998,1440104..1440321,1441085..1441250,1442959..1443103,1448357..1448448,1448857..1448952,1449704..1449815,1450397..1450494,1450955..1451066,1451775..1451867,1452712..1452911,1454892..1455053,1455826..1455960,1456496..1456636,1457193..1457316,1459191..1459235,1461750..1461826)
location: region:1437996-1461826:1
so has part: feature:1437996-1437998:1:exon
so has part: feature:1440104-1440321:1:exon
so has part: feature:1441085-1441250:1:exon
so has part: feature:1442959-1443103:1:exon
so has part: feature:1448357-1448448:1:exon
so has part: feature:1448857-1448952:1:exon
so has part: feature:1449704-1449815:1:exon
so has part: feature:1450397-1450494:1:exon
so has part: feature:1450955-1451066:1:exon
so has part: feature:1451775-1451867:1:exon
so has part: feature:1452712-1452911:1:exon
so has part: feature:1454892-1455053:1:exon
so has part: feature:1455826-1455960:1:exon
so has part: feature:1456496-1456636:1:exon
so has part: feature:1457193-1457316:1:exon
so has part: feature:1459191-1459235:1:exon
so has part: feature:1461750-1461826:1:exon

XP_030817057.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1437996-1437998:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1440104-1440321:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1441085-1441250:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1442959-1443103:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1448357-1448448:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1448857-1448952:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1449704-1449815:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1450397-1450494:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1450955-1451066:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1451775-1451867:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1452712-1452911:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1454892-1455053:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1455826-1455960:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1456496-1456636:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1457193-1457316:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1459191-1459235:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1461750-1461826:1:exon

STRBP
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 87175
gene: STRBP
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: spermatid perinuclear RNA-binding protein isoform X1
translation: MRSIRSFANDDRHVMVKHSTIYPSPEELEAVQNMVSTVECALKHVSDWMDEKNKSAKSEGDVEAKEEAAEGTAKDQGGRTLCGVMRIGLVAKGLLIKDDMDLELVLMCKEKPTKTLLCIVKDNLPAQIQKLTEEKYLVEEHVNEAAIVIHNTKEPKLTLKVILTSPLIRDEAEKKEGVDNVAMKDPPDLLDRQKCLEALASLRHAKWFQARANGLKSCVIVLRILRDLCNRVPTWAPLKGWPLELICEKSIGTCNRPLGAGEALRRVMECLASGILLPGGPGLHDPCEREPTDALSYMTVQQKEAITHSAQHALRLSAFGQIYKVLEMDPLPSNKSFQKYSWSVTDKEGTGSSALKRPFEDSVGDDKDPNKKMKRNLRKILDSKAIDLMNALMRLNQIRPGLQYKLLSQSGPVHAPVFTMSVDVDGTTYEASGPSKKTAKLHVAVKVLQAMGYPTGFDADVECVSSDEKSDTEGKNETTSSISSNNNTGNSTADTSATLEVRTQGPILTASGKNPVMELNEKRRGLKYELISETGGSHDKRFVMEVEVDGQKFRGAGPNKKVAKASAALAALEKLFSGPNAANNKKKKILPQTKGVVNTAVSAAVQAVRGRGRGALTRGAFVGAAAATGYITPGYGAPYGYSTAAPAYGTYSPVINTLEIMQKLLWQSKCGSPRRNSKRFKLLNHDNNTTFMP
SIO_010081: STRBP
subclass of: SO_0000673
so part of: STRBP
location: join(1437996..1437998,1440104..1440321,1441085..1441250,1442959..1443103,1448354..1448448,1448857..1448952,1449704..1449815,1450397..1450494,1450955..1451066,1451775..1451867,1452712..1452911,1454892..1455053,1455826..1455960,1456496..1456636,1457193..1457316,1459191..1459372)
location: region:1437996-1459372:1
so has part: feature:1437996-1437998:1:exon
so has part: feature:1440104-1440321:1:exon
so has part: feature:1441085-1441250:1:exon
so has part: feature:1442959-1443103:1:exon
so has part: feature:1448354-1448448:1:exon
so has part: feature:1448857-1448952:1:exon
so has part: feature:1449704-1449815:1:exon
so has part: feature:1450397-1450494:1:exon
so has part: feature:1450955-1451066:1:exon
so has part: feature:1451775-1451867:1:exon
so has part: feature:1452712-1452911:1:exon
so has part: feature:1454892-1455053:1:exon
so has part: feature:1455826-1455960:1:exon
so has part: feature:1456496-1456636:1:exon
so has part: feature:1457193-1457316:1:exon
so has part: feature:1459191-1459372:1:exon

XP_030817051.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1437996-1437998:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1440104-1440321:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1441085-1441250:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1442959-1443103:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1448354-1448448:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1448857-1448952:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1449704-1449815:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1450397-1450494:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1450955-1451066:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1451775-1451867:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1452712-1452911:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1454892-1455053:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1455826-1455960:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1456496-1456636:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1457193-1457316:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1459191-1459372:1:exon

STRBP
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 87175
gene: STRBP
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: spermatid perinuclear RNA-binding protein isoform X1
translation: MRSIRSFANDDRHVMVKHSTIYPSPEELEAVQNMVSTVECALKHVSDWMDEKNKSAKSEGDVEAKEEAAEGTAKDQGGRTLCGVMRIGLVAKGLLIKDDMDLELVLMCKEKPTKTLLCIVKDNLPAQIQKLTEEKYLVEEHVNEAAIVIHNTKEPKLTLKVILTSPLIRDEAEKKEGVDNVAMKDPPDLLDRQKCLEALASLRHAKWFQARANGLKSCVIVLRILRDLCNRVPTWAPLKGWPLELICEKSIGTCNRPLGAGEALRRVMECLASGILLPGGPGLHDPCEREPTDALSYMTVQQKEAITHSAQHALRLSAFGQIYKVLEMDPLPSNKSFQKYSWSVTDKEGTGSSALKRPFEDSVGDDKDPNKKMKRNLRKILDSKAIDLMNALMRLNQIRPGLQYKLLSQSGPVHAPVFTMSVDVDGTTYEASGPSKKTAKLHVAVKVLQAMGYPTGFDADVECVSSDEKSDTEGKNETTSSISSNNNTGNSTADTSATLEVRTQGPILTASGKNPVMELNEKRRGLKYELISETGGSHDKRFVMEVEVDGQKFRGAGPNKKVAKASAALAALEKLFSGPNAANNKKKKILPQTKGVVNTAVSAAVQAVRGRGRGALTRGAFVGAAAATGYITPGYGAPYGYSTAAPAYGTYSPVINTLEIMQKLLWQSKCGSPRRNSKRFKLLNHDNNTTFMP
SIO_010081: STRBP
subclass of: SO_0000673
so part of: STRBP
location: join(1437996..1437998,1440104..1440321,1441085..1441250,1442959..1443103,1448354..1448448,1448857..1448952,1449704..1449815,1450397..1450494,1450955..1451066,1451775..1451867,1452712..1452911,1454892..1455053,1455826..1455960,1456496..1456636,1457193..1457316,1459191..1459372)
location: region:1437996-1459372:1
so has part: feature:1437996-1437998:1:exon
so has part: feature:1440104-1440321:1:exon
so has part: feature:1441085-1441250:1:exon
so has part: feature:1442959-1443103:1:exon
so has part: feature:1448354-1448448:1:exon
so has part: feature:1448857-1448952:1:exon
so has part: feature:1449704-1449815:1:exon
so has part: feature:1450397-1450494:1:exon
so has part: feature:1450955-1451066:1:exon
so has part: feature:1451775-1451867:1:exon
so has part: feature:1452712-1452911:1:exon
so has part: feature:1454892-1455053:1:exon
so has part: feature:1455826-1455960:1:exon
so has part: feature:1456496-1456636:1:exon
so has part: feature:1457193-1457316:1:exon
so has part: feature:1459191-1459372:1:exon

XP_030817053.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1437996-1437998:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1440104-1440321:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1441085-1441250:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1442959-1443103:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1448354-1448448:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1448857-1448952:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1449704-1449815:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1450397-1450494:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1450955-1451066:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1451775-1451867:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1452712-1452911:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1454892-1455053:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1455826-1455960:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1456496-1456636:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1457193-1457316:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1459191-1459372:1:exon

STRBP
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 87175
gene: STRBP
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: spermatid perinuclear RNA-binding protein isoform X1
translation: MRSIRSFANDDRHVMVKHSTIYPSPEELEAVQNMVSTVECALKHVSDWMDEKNKSAKSEGDVEAKEEAAEGTAKDQGGRTLCGVMRIGLVAKGLLIKDDMDLELVLMCKEKPTKTLLCIVKDNLPAQIQKLTEEKYLVEEHVNEAAIVIHNTKEPKLTLKVILTSPLIRDEAEKKEGVDNVAMKDPPDLLDRQKCLEALASLRHAKWFQARANGLKSCVIVLRILRDLCNRVPTWAPLKGWPLELICEKSIGTCNRPLGAGEALRRVMECLASGILLPGGPGLHDPCEREPTDALSYMTVQQKEAITHSAQHALRLSAFGQIYKVLEMDPLPSNKSFQKYSWSVTDKEGTGSSALKRPFEDSVGDDKDPNKKMKRNLRKILDSKAIDLMNALMRLNQIRPGLQYKLLSQSGPVHAPVFTMSVDVDGTTYEASGPSKKTAKLHVAVKVLQAMGYPTGFDADVECVSSDEKSDTEGKNETTSSISSNNNTGNSTADTSATLEVRTQGPILTASGKNPVMELNEKRRGLKYELISETGGSHDKRFVMEVEVDGQKFRGAGPNKKVAKASAALAALEKLFSGPNAANNKKKKILPQTKGVVNTAVSAAVQAVRGRGRGALTRGAFVGAAAATGYITPGYGAPYGYSTAAPAYGTYSPVINTLEIMQKLLWQSKCGSPRRNSKRFKLLNHDNNTTFMP
SIO_010081: STRBP
subclass of: SO_0000673
so part of: STRBP
location: join(1437996..1437998,1440104..1440321,1441085..1441250,1442959..1443103,1448354..1448448,1448857..1448952,1449704..1449815,1450397..1450494,1450955..1451066,1451775..1451867,1452712..1452911,1454892..1455053,1455826..1455960,1456496..1456636,1457193..1457316,1459191..1459372)
location: region:1437996-1459372:1
so has part: feature:1437996-1437998:1:exon
so has part: feature:1440104-1440321:1:exon
so has part: feature:1441085-1441250:1:exon
so has part: feature:1442959-1443103:1:exon
so has part: feature:1448354-1448448:1:exon
so has part: feature:1448857-1448952:1:exon
so has part: feature:1449704-1449815:1:exon
so has part: feature:1450397-1450494:1:exon
so has part: feature:1450955-1451066:1:exon
so has part: feature:1451775-1451867:1:exon
so has part: feature:1452712-1452911:1:exon
so has part: feature:1454892-1455053:1:exon
so has part: feature:1455826-1455960:1:exon
so has part: feature:1456496-1456636:1:exon
so has part: feature:1457193-1457316:1:exon
so has part: feature:1459191-1459372:1:exon

XP_030817054.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1437996-1437998:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1440104-1440321:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1441085-1441250:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1442959-1443103:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1448354-1448448:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1448857-1448952:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1449704-1449815:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1450397-1450494:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1450955-1451066:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1451775-1451867:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1452712-1452911:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1454892-1455053:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1455826-1455960:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1456496-1456636:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1457193-1457316:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1459191-1459372:1:exon

STRBP
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 87175
gene: STRBP
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: spermatid perinuclear RNA-binding protein isoform X1
translation: MRSIRSFANDDRHVMVKHSTIYPSPEELEAVQNMVSTVECALKHVSDWMDEKNKSAKSEGDVEAKEEAAEGTAKDQGGRTLCGVMRIGLVAKGLLIKDDMDLELVLMCKEKPTKTLLCIVKDNLPAQIQKLTEEKYLVEEHVNEAAIVIHNTKEPKLTLKVILTSPLIRDEAEKKEGVDNVAMKDPPDLLDRQKCLEALASLRHAKWFQARANGLKSCVIVLRILRDLCNRVPTWAPLKGWPLELICEKSIGTCNRPLGAGEALRRVMECLASGILLPGGPGLHDPCEREPTDALSYMTVQQKEAITHSAQHALRLSAFGQIYKVLEMDPLPSNKSFQKYSWSVTDKEGTGSSALKRPFEDSVGDDKDPNKKMKRNLRKILDSKAIDLMNALMRLNQIRPGLQYKLLSQSGPVHAPVFTMSVDVDGTTYEASGPSKKTAKLHVAVKVLQAMGYPTGFDADVECVSSDEKSDTEGKNETTSSISSNNNTGNSTADTSATLEVRTQGPILTASGKNPVMELNEKRRGLKYELISETGGSHDKRFVMEVEVDGQKFRGAGPNKKVAKASAALAALEKLFSGPNAANNKKKKILPQTKGVVNTAVSAAVQAVRGRGRGALTRGAFVGAAAATGYITPGYGAPYGYSTAAPAYGTYSPVINTLEIMQKLLWQSKCGSPRRNSKRFKLLNHDNNTTFMP
SIO_010081: STRBP
subclass of: SO_0000673
so part of: STRBP
location: join(1437996..1437998,1440104..1440321,1441085..1441250,1442959..1443103,1448354..1448448,1448857..1448952,1449704..1449815,1450397..1450494,1450955..1451066,1451775..1451867,1452712..1452911,1454892..1455053,1455826..1455960,1456496..1456636,1457193..1457316,1459191..1459372)
location: region:1437996-1459372:1
so has part: feature:1437996-1437998:1:exon
so has part: feature:1440104-1440321:1:exon
so has part: feature:1441085-1441250:1:exon
so has part: feature:1442959-1443103:1:exon
so has part: feature:1448354-1448448:1:exon
so has part: feature:1448857-1448952:1:exon
so has part: feature:1449704-1449815:1:exon
so has part: feature:1450397-1450494:1:exon
so has part: feature:1450955-1451066:1:exon
so has part: feature:1451775-1451867:1:exon
so has part: feature:1452712-1452911:1:exon
so has part: feature:1454892-1455053:1:exon
so has part: feature:1455826-1455960:1:exon
so has part: feature:1456496-1456636:1:exon
so has part: feature:1457193-1457316:1:exon
so has part: feature:1459191-1459372:1:exon

XP_030817055.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1437996-1437998:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1440104-1440321:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1441085-1441250:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1442959-1443103:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1448354-1448448:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1448857-1448952:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1449704-1449815:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1450397-1450494:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1450955-1451066:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1451775-1451867:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1452712-1452911:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1454892-1455053:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1455826-1455960:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1456496-1456636:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1457193-1457316:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1459191-1459372:1:exon

RABGAP1
type: Gene
subclass of: SO_0000704
RO_0002162: 87175
gene: RABGAP1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1482441..1543034)
location: region:1482441-1543034:-1
so has part: feature:1482441-1543034:-1:exon
subclass of: SO_0000010

115910783
type: Gene
SIO_000068: ncbigene

position:1482441:-1
position: 1482441
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1543034:-1
position: 1543034
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1482441-1543034:-1:exon

RABGAP1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 87175
gene: RABGAP1
product: RAB GTPase activating protein 1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 mRNAs, 35 ESTs, 30 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_030961207.1
SIO_010081: RABGAP1
subclass of: SO_0000673
so part of: RABGAP1
location: complement(join(1482441..1484135,1484943..1485140,1485601..1485672,1486479..1486562,1487037..1487141,1489822..1489932,1490890..1490982,1493612..1493740,1494067..1494108,1495663..1495806,1496372..1496497,1498668..1498742,1499461..1499574,1520551..1520701,1523434..1523527,1524136..1524310,1526876..1527045,1528234..1528336,1529289..1529355,1529972..1530082,1530306..1530463,1530720..1530894,1531482..1531686,1532107..1532338,1536526..1536727,1542986..1543034))
location: region:1482441-1543034:-1
so has part: feature:1542986-1543034:-1:exon
so has part: feature:1536526-1536727:-1:exon
so has part: feature:1532107-1532338:-1:exon
so has part: feature:1531482-1531686:-1:exon
so has part: feature:1530720-1530894:-1:exon
so has part: feature:1530306-1530463:-1:exon
so has part: feature:1529972-1530082:-1:exon
so has part: feature:1529289-1529355:-1:exon
so has part: feature:1528234-1528336:-1:exon
so has part: feature:1526876-1527045:-1:exon
so has part: feature:1524136-1524310:-1:exon
so has part: feature:1523434-1523527:-1:exon
so has part: feature:1520551-1520701:-1:exon
so has part: feature:1499461-1499574:-1:exon
so has part: feature:1498668-1498742:-1:exon
so has part: feature:1496372-1496497:-1:exon
so has part: feature:1495663-1495806:-1:exon
so has part: feature:1494067-1494108:-1:exon
so has part: feature:1493612-1493740:-1:exon
so has part: feature:1490890-1490982:-1:exon
so has part: feature:1489822-1489932:-1:exon
so has part: feature:1487037-1487141:-1:exon
so has part: feature:1486479-1486562:-1:exon
so has part: feature:1485601-1485672:-1:exon
so has part: feature:1484943-1485140:-1:exon
so has part: feature:1482441-1484135:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1542986-1543034:-1:exon

position:1542986:-1
position: 1542986
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1536526-1536727:-1:exon

position:1536526:-1
position: 1536526
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1536727:-1
position: 1536727
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1532107-1532338:-1:exon

position:1532107:-1
position: 1532107
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1532338:-1
position: 1532338
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1531482-1531686:-1:exon

position:1531482:-1
position: 1531482
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1531686:-1
position: 1531686
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1530720-1530894:-1:exon

position:1530720:-1
position: 1530720
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1530894:-1
position: 1530894
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1530306-1530463:-1:exon

position:1530306:-1
position: 1530306
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1530463:-1
position: 1530463
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1529972-1530082:-1:exon

position:1529972:-1
position: 1529972
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1530082:-1
position: 1530082
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1529289-1529355:-1:exon

position:1529289:-1
position: 1529289
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1529355:-1
position: 1529355
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:1528234-1528336:-1:exon

position:1528234:-1
position: 1528234
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1528336:-1
position: 1528336
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:1526876-1527045:-1:exon

position:1526876:-1
position: 1526876
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1527045:-1
position: 1527045
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:1524136-1524310:-1:exon

position:1524136:-1
position: 1524136
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1524310:-1
position: 1524310
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:1523434-1523527:-1:exon

position:1523434:-1
position: 1523434
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1523527:-1
position: 1523527
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:1520551-1520701:-1:exon

position:1520551:-1
position: 1520551
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1520701:-1
position: 1520701
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:1499461-1499574:-1:exon

position:1499461:-1
position: 1499461
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1499574:-1
position: 1499574
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:1498668-1498742:-1:exon

position:1498668:-1
position: 1498668
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1498742:-1
position: 1498742
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:1496372-1496497:-1:exon

position:1496372:-1
position: 1496372
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1496497:-1
position: 1496497
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:1495663-1495806:-1:exon

position:1495663:-1
position: 1495663
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1495806:-1
position: 1495806
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:1494067-1494108:-1:exon

position:1494067:-1
position: 1494067
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1494108:-1
position: 1494108
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:1493612-1493740:-1:exon

position:1493612:-1
position: 1493612
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1493740:-1
position: 1493740
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:1490890-1490982:-1:exon

position:1490890:-1
position: 1490890
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1490982:-1
position: 1490982
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:1489822-1489932:-1:exon

position:1489822:-1
position: 1489822
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1489932:-1
position: 1489932
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 22
SIO_000628: feature:1487037-1487141:-1:exon

position:1487037:-1
position: 1487037
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1487141:-1
position: 1487141
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 23
SIO_000628: feature:1486479-1486562:-1:exon

position:1486479:-1
position: 1486479
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1486562:-1
position: 1486562
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 24
SIO_000628: feature:1485601-1485672:-1:exon

position:1485601:-1
position: 1485601
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1485672:-1
position: 1485672
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 25
SIO_000628: feature:1484943-1485140:-1:exon

position:1484943:-1
position: 1484943
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1485140:-1
position: 1485140
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 26
SIO_000628: feature:1482441-1484135:-1:exon

position:1484135:-1
position: 1484135
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

RABGAP1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 87175
gene: RABGAP1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: rab GTPase-activating protein 1
translation: MDDKASVGKISVSSDSVSTLNSEDFVLVSRQGDETPSTNNGSDDEKTGLKIVGNGSEQQLQRELEDVLMDPPMEDQGSDRDHGEVRTDGDGEEPVVLEASASSTINPVSVAGLQKPEMSLPVKPSQGDCEDLSPFTPVTDEDSVVFSKLTYLGCASVNAPRSEVEALRMMSILRGQCQISLDVTLSVPNVSEGTVRLLDPQTNTEIANYPIYKILFCVRGHDGTPESDCFAFTESHYNAELFRIHVFRCEIQEAVSRILYSFATAFRRSAKQTPLSATATPQTPDSDIFTFSVSLEIKEDDGKGYFSAVPKDKDRQCFKLRQGIDKKIVIYVQQTTNKELAIERCFGLLLSRGKDVRSGDMHLLDLESMGKSSDGKSYVITGSWNQKSPHFQFVNEETPKDKVLFMTTAVDLVITEVQEPVRFILETKVRVCSPNERLFWPFSKRSSTENFFLKLKQIKQKDRKNNSDTLYEVVCLESESERERRKTTASPSLRLPQSGSQGSMIPSPPEDDEEEDNDEPLLSGSGDVSKECAEKILETWGELLSKWHLNLSVRPKTLSALVRSGVPEALPGEVWQLLAGCHNNDHLVEKYRILITKESPQDSAITRDINRTFPAHDYFKDTGGDGQDSLYKICKAYSVYDEEIGYCQGQSFLAAVLLLHMPEEQAFSVLVKIMFDYGLRELFKQNFEDLHCKFYQLERLMQEYIPDLYNHFLDISLEAHMYASQWFLTLFTAKFPLYMVFHIIDLLLCEGISVIFNVALGLLKTTKDDLLLTDFEGALKFFRVQLPKRYRSEENAKKLMELACNMKISQKKLKKYEKEYHTMREQQAQQEDPIERFERENRRLQEANMRLEQENDDLAHELVTSKIALRKDLDNAEEKADALNKELLMTKQKLIDAEEEKRRLEEESAQLKEMCRRELDKAESEIKKNSSIIGDYKQICSQLSERLEKQQTANKAEIEKIRQKVDDCEHCREFFNKEGRVKVASTAKDGSDEDTDEEKETLKNQLREMELELAQTKLQLVEAECKIQDLEHHLGLALNEVQAAKKTWFNRTISSIKTVTGVQGKETC
SIO_010081: RABGAP1
subclass of: SO_0000673
so part of: RABGAP1
location: complement(join(1484013..1484135,1484943..1485140,1485601..1485672,1486479..1486562,1487037..1487141,1489822..1489932,1490890..1490982,1493612..1493740,1494067..1494108,1495663..1495806,1496372..1496497,1498668..1498742,1499461..1499574,1520551..1520701,1523434..1523527,1524136..1524310,1526876..1527045,1528234..1528336,1529289..1529355,1529972..1530082,1530306..1530463,1530720..1530894,1531482..1531686,1532107..1532338,1536526..1536675))
location: region:1484013-1536675:-1
so has part: feature:1536526-1536675:-1:exon
so has part: feature:1532107-1532338:-1:exon
so has part: feature:1531482-1531686:-1:exon
so has part: feature:1530720-1530894:-1:exon
so has part: feature:1530306-1530463:-1:exon
so has part: feature:1529972-1530082:-1:exon
so has part: feature:1529289-1529355:-1:exon
so has part: feature:1528234-1528336:-1:exon
so has part: feature:1526876-1527045:-1:exon
so has part: feature:1524136-1524310:-1:exon
so has part: feature:1523434-1523527:-1:exon
so has part: feature:1520551-1520701:-1:exon
so has part: feature:1499461-1499574:-1:exon
so has part: feature:1498668-1498742:-1:exon
so has part: feature:1496372-1496497:-1:exon
so has part: feature:1495663-1495806:-1:exon
so has part: feature:1494067-1494108:-1:exon
so has part: feature:1493612-1493740:-1:exon
so has part: feature:1490890-1490982:-1:exon
so has part: feature:1489822-1489932:-1:exon
so has part: feature:1487037-1487141:-1:exon
so has part: feature:1486479-1486562:-1:exon
so has part: feature:1485601-1485672:-1:exon
so has part: feature:1484943-1485140:-1:exon
so has part: feature:1484013-1484135:-1:exon

XP_030817067.1
type: Protein
SIO_000068: ncbiprotein

position:1484013:-1
position: 1484013
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1536675:-1
position: 1536675
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1536526-1536675:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1532107-1532338:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1531482-1531686:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1530720-1530894:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1530306-1530463:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1529972-1530082:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1529289-1529355:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1528234-1528336:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1526876-1527045:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1524136-1524310:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1523434-1523527:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1520551-1520701:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1499461-1499574:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1498668-1498742:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1496372-1496497:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1495663-1495806:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1494067-1494108:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:1493612-1493740:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:1490890-1490982:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:1489822-1489932:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:1487037-1487141:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:1486479-1486562:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:1485601-1485672:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:1484943-1485140:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:1484013-1484135:-1:exon

GPR21
type: Gene
subclass of: SO_0000704
RO_0002162: 87175
gene: GPR21
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1503342..1514208)
location: region:1503342-1514208:-1
so has part: feature:1503342-1514208:-1:exon
subclass of: SO_0000010

115910784
type: Gene
SIO_000068: ncbigene

position:1503342:-1
position: 1503342
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1514208:-1
position: 1514208
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1503342-1514208:-1:exon

GPR21
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 87175
gene: GPR21
product: G protein-coupled receptor 21
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 8 ESTs, 15 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XM_030961208.1
SIO_010081: GPR21
subclass of: SO_0000673
so part of: GPR21
location: complement(join(1503342..1513755,1514122..1514208))
location: region:1503342-1514208:-1
so has part: feature:1514122-1514208:-1:exon
so has part: feature:1503342-1513755:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1514122-1514208:-1:exon

position:1514122:-1
position: 1514122
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1503342-1513755:-1:exon

position:1513755:-1
position: 1513755
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

GPR21
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 87175
gene: GPR21
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: probable G-protein coupled receptor 21
translation: MNSSLVGNQSGRPFCLLAISYLETINFCLLEVVIIVFLMVLIISGNIIVIFVFHCAPLLNHHTTSYFIQTMAYADLLVGVSCLVPSLSLLHYPIVLSESLVCQIFGYVVSVLKSVSMASLACISIDRYIAITKPLTYNTLVTPWRLRICILTIWLYSCLVFLPSFHWGKPGYHGDVFQWCANSWNTDPYFTLFIVVMLYAPAAFIVCFTYFNIFRICQQHTKEINERRVRFSSQDGEAGEAQPCPDKRYAMVLFRITSVFYILWLPYIIYFLLESSNVYSNRVASFLTTWLAISNSFCNCVIYSLSNSVFQKGLKRLSGAICASCARQRVAKDSSTSRSKRSSNGCHV
SIO_010081: GPR21
subclass of: SO_0000673
so part of: GPR21
location: complement(1512341..1513387)
location: region:1512341-1513387:-1
so has part: feature:1512341-1513387:-1:exon

XP_030817068.1
type: Protein
SIO_000068: ncbiprotein

position:1512341:-1
position: 1512341
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1513387:-1
position: 1513387
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1512341-1513387:-1:exon

ZBTB26
type: Gene
subclass of: SO_0000704
RO_0002162: 87175
gene: ZBTB26
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1543084..1550691
location: region:1543084-1550691:1
so has part: feature:1543084-1550691:1:exon
subclass of: SO_0000010

115911012
type: Gene
SIO_000068: ncbigene

position:1543084:1
position: 1543084
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1550691:1
position: 1550691
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1543084-1550691:1:exon

ZBTB26
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 87175
gene: ZBTB26
product: zinc finger and BTB domain containing 26
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 9 ESTs, 11 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_030961655.1
SIO_010081: ZBTB26
subclass of: SO_0000673
so part of: ZBTB26
location: join(1543084..1543145,1543362..1543424,1545227..1550691)
location: region:1543084-1550691:1
so has part: feature:1543084-1543145:1:exon
so has part: feature:1543362-1543424:1:exon
so has part: feature:1545227-1550691:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1543084-1543145:1:exon

position:1543145:1
position: 1543145
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1543362-1543424:1:exon

position:1543362:1
position: 1543362
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1543424:1
position: 1543424
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1545227-1550691:1:exon

position:1545227:1
position: 1545227
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

ZBTB26
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 87175
gene: ZBTB26
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: zinc finger and BTB domain-containing protein 26
translation: MSERSDILHFKFDNYGDSMLQKMNKLREENKFCDVVVHIDDVEVHGHKIVFAAGSPFLRDQFLLNDSRDVKISILQSSEVGRQLLLSCYSGTLEFPEMELVNYLTAASFLQMSHIVERCTQALWKFIKPKQPLESKECEQQSDSSELKEHQGDDDSLQQDSPCIQPSEDSMDMEDSDIQIIKVESIGEVTEVRNKKDQNQFISSEQTALHSSEPQHFLINSTVENRANEIEQNHLHNYALSYAGSDNIILASKDMFGPNNRGIDKGLQWHHQCPKCTRVFRHLENYANHLKMHKLFMCLLCGKTFTQKGNLHRHMRVHAGIKPFQCKICGKTFSQKCSLQDHLNLHSGDKPHKCNYCDMVFAHKPVLRKHLKQLHGKNSFDNANERNVQDITVDFDSFTCSAATDSKVCQQADASQVLDAGKLPQAVLGLRNDSTCVN
SIO_010081: ZBTB26
subclass of: SO_0000673
so part of: ZBTB26
location: 1545237..1546553
location: region:1545237-1546553:1
so has part: feature:1545237-1546553:1:exon

XP_030817515.1
type: Protein
SIO_000068: ncbiprotein

position:1545237:1
position: 1545237
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1546553:1
position: 1546553
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1545237-1546553:1:exon

ZBTB6
type: Gene
subclass of: SO_0000704
RO_0002162: 87175
gene: ZBTB6
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1550840..1554011
location: region:1550840-1554011:1
so has part: feature:1550840-1554011:1:exon
subclass of: SO_0000010

115910873
type: Gene
SIO_000068: ncbigene

position:1550840:1
position: 1550840
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1554011:1
position: 1554011
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1550840-1554011:1:exon

ZBTB6
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 87175
gene: ZBTB6
product: zinc finger and BTB domain containing 6
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 ESTs, 12 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_030961389.1
SIO_010081: ZBTB6
subclass of: SO_0000673
so part of: ZBTB6
location: 1550840..1554011
location: region:1550840-1554011:1
so has part: feature:1550840-1554011:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1550840-1554011:1:exon

ZBTB6
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 87175
gene: ZBTB6
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: zinc finger and BTB domain-containing protein 6
translation: MAADSEVLHFQFEQQGDAVLQKMNLLRQQNLFCDVSIYINDTEFQGHKVIFAACSTFMRDQFLLNQSRQVRITILQSAEVGRKLLLSCYTGALEVKRKELLKYLTAASYLQMVHIVEKCTEALSKYLEIDASMESGTQAAEGCHSSDAELRSGDEVLDKDCEIIEISEDSPENKEYPVKQEDGDGDGDGDGPHPAAQSLVSERKDTKSPEISTVEIGYKDDEICIFRMDSMGVANAENDHFPQPCTSSKTNLYFPETQHSLINSTVESRNTEMPGNHFQAFVGDNPEGTSSGANGFQSLEDSGSSWRHQCPKCPRGFLHLENYLRHLKMHKLFLCLQCGKTFTQKKNLNRHIRGHMGIRPFQCMVCLKTFTAKSTLQDHLNIHSGDRPYKCHCCDMDFKHKSALKKHLTSVHGRSSSEKPNLNTITKVKIDYD
SIO_010081: ZBTB6
subclass of: SO_0000673
so part of: ZBTB6
location: 1550952..1552253
location: region:1550952-1552253:1
so has part: feature:1550952-1552253:1:exon

XP_030817249.1
type: Protein
SIO_000068: ncbiprotein

position:1550952:1
position: 1550952
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1552253:1
position: 1552253
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1550952-1552253:1:exon

RC3H2
type: Gene
subclass of: SO_0000704
RO_0002162: 87175
gene: RC3H2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1554877..1580121
location: region:1554877-1580121:1
so has part: feature:1554877-1580121:1:exon
subclass of: SO_0000010

115910821
type: Gene
SIO_000068: ncbigene

position:1554877:1
position: 1554877
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1580121:1
position: 1580121
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1554877-1580121:1:exon

RC3H2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 87175
gene: RC3H2
product: ring finger and CCCH-type domains 2, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 mRNAs, 31 ESTs, 17 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_030961290.1
SIO_010081: RC3H2
subclass of: SO_0000673
so part of: RC3H2
location: join(1554877..1554934,1561550..1561846,1563207..1563324,1563775..1564008,1564754..1564929,1565032..1565232,1565603..1565735,1565975..1566093,1566475..1566587,1567160..1567468,1568200..1568414,1569372..1569799,1570222..1570392,1571222..1571377,1571646..1571859,1572024..1572108,1572626..1572707,1572854..1572988,1573532..1573639,1574019..1574167,1574777..1580121)
location: region:1554877-1580121:1
so has part: feature:1554877-1554934:1:exon
so has part: feature:1561550-1561846:1:exon
so has part: feature:1563207-1563324:1:exon
so has part: feature:1563775-1564008:1:exon
so has part: feature:1564754-1564929:1:exon
so has part: feature:1565032-1565232:1:exon
so has part: feature:1565603-1565735:1:exon
so has part: feature:1565975-1566093:1:exon
so has part: feature:1566475-1566587:1:exon
so has part: feature:1567160-1567468:1:exon
so has part: feature:1568200-1568414:1:exon
so has part: feature:1569372-1569799:1:exon
so has part: feature:1570222-1570392:1:exon
so has part: feature:1571222-1571377:1:exon
so has part: feature:1571646-1571859:1:exon
so has part: feature:1572024-1572108:1:exon
so has part: feature:1572626-1572707:1:exon
so has part: feature:1572854-1572988:1:exon
so has part: feature:1573532-1573639:1:exon
so has part: feature:1574019-1574167:1:exon
so has part: feature:1574777-1580121:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1554877-1554934:1:exon

position:1554934:1
position: 1554934
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1561550-1561846:1:exon

position:1561550:1
position: 1561550
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1561846:1
position: 1561846
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1563207-1563324:1:exon

position:1563207:1
position: 1563207
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1563324:1
position: 1563324
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1563775-1564008:1:exon

position:1563775:1
position: 1563775
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1564008:1
position: 1564008
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1564754-1564929:1:exon

position:1564754:1
position: 1564754
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1564929:1
position: 1564929
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1565032-1565232:1:exon

position:1565032:1
position: 1565032
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1565232:1
position: 1565232
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1565603-1565735:1:exon

position:1565603:1
position: 1565603
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1565735:1
position: 1565735
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1565975-1566093:1:exon

position:1565975:1
position: 1565975
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1566093:1
position: 1566093
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:1566475-1566587:1:exon

position:1566475:1
position: 1566475
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1566587:1
position: 1566587
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:1567160-1567468:1:exon

position:1567160:1
position: 1567160
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1567468:1
position: 1567468
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:1568200-1568414:1:exon

position:1568200:1
position: 1568200
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1568414:1
position: 1568414
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:1569372-1569799:1:exon

position:1569372:1
position: 1569372
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1569799:1
position: 1569799
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:1570222-1570392:1:exon

position:1570222:1
position: 1570222
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1570392:1
position: 1570392
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:1571222-1571377:1:exon

position:1571222:1
position: 1571222
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1571377:1
position: 1571377
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:1571646-1571859:1:exon

position:1571646:1
position: 1571646
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1571859:1
position: 1571859
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:1572024-1572108:1:exon

position:1572024:1
position: 1572024
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1572108:1
position: 1572108
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:1572626-1572707:1:exon

position:1572626:1
position: 1572626
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1572707:1
position: 1572707
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:1572854-1572988:1:exon

position:1572854:1
position: 1572854
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1572988:1
position: 1572988
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:1573532-1573639:1:exon

position:1573532:1
position: 1573532
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1573639:1
position: 1573639
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:1574019-1574167:1:exon

position:1574019:1
position: 1574019
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1574167:1
position: 1574167
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:1574777-1580121:1:exon

position:1574777:1
position: 1574777
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

RC3H2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 87175
gene: RC3H2
product: ring finger and CCCH-type domains 2, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 mRNAs, 5 ESTs, 12 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XM_030961291.1
SIO_010081: RC3H2
subclass of: SO_0000673
so part of: RC3H2
location: join(1554877..1554934,1561550..1561846,1563207..1563324,1563775..1564008,1564754..1564929,1565032..1565232,1565603..1565735,1565975..1566093,1566475..1566587,1567160..1567468,1568200..1568414,1569372..1569799,1570222..1570392,1571222..1571377,1571646..1571859,1572024..1572108,1572626..1572707,1572854..1572988,1573532..1573639,1574019..1574148,1574777..1574948)
location: region:1554877-1574948:1
so has part: feature:1554877-1554934:1:exon
so has part: feature:1561550-1561846:1:exon
so has part: feature:1563207-1563324:1:exon
so has part: feature:1563775-1564008:1:exon
so has part: feature:1564754-1564929:1:exon
so has part: feature:1565032-1565232:1:exon
so has part: feature:1565603-1565735:1:exon
so has part: feature:1565975-1566093:1:exon
so has part: feature:1566475-1566587:1:exon
so has part: feature:1567160-1567468:1:exon
so has part: feature:1568200-1568414:1:exon
so has part: feature:1569372-1569799:1:exon
so has part: feature:1570222-1570392:1:exon
so has part: feature:1571222-1571377:1:exon
so has part: feature:1571646-1571859:1:exon
so has part: feature:1572024-1572108:1:exon
so has part: feature:1572626-1572707:1:exon
so has part: feature:1572854-1572988:1:exon
so has part: feature:1573532-1573639:1:exon
so has part: feature:1574019-1574148:1:exon
so has part: feature:1574777-1574948:1:exon

position:1574948:1
position: 1574948
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1554877-1554934:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1561550-1561846:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1563207-1563324:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1563775-1564008:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1564754-1564929:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1565032-1565232:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1565603-1565735:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1565975-1566093:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1566475-1566587:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1567160-1567468:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1568200-1568414:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1569372-1569799:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1570222-1570392:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1571222-1571377:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1571646-1571859:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1572024-1572108:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1572626-1572707:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:1572854-1572988:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:1573532-1573639:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:1574019-1574148:1:exon

position:1574148:1
position: 1574148
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:1574777-1574948:1:exon

RC3H2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 87175
gene: RC3H2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: roquin-2 isoform X1
translation: MPVQAAQWTEFLSCPICYNEFDENVHKPISLGCSHTVCKTCLNKLHRKACPFDQTAINTDIDVLPVNFALLQLVGAQVPDHQTVKLSNVGENKHYEVAKKCVEDLALYLKPLSGGKGVASLNQSALSRPMQRKLVTLVNCQLVEEEGRVRAMRAARSLGERTVTELILQHQNPQQLSANLWAAVRARGCQFLGPAMQEEALKLVLLALEDGSALSRKVLVLFVVQRLEPRFPQASKTSIGHVVQLLYRASCFKVTKRDEDSSLMQLKEEFRSYEALRREHDAQIVHIAMEAGLRISPEQWSSLLYGDLAHKSHMQSIIDKLQSPESFAKSVQELTIVLQRTGDPANLNRLRPHLELLANIDPNPDAASPTWEQLENAMVAVKTVVHGLVDFIQNYSRKGHETPQPQPNSKYKTSMCRDLRQQGGCPRGTNCTFAHSQEELEKYRLRNKKISATVRTFPLLNKVGVNSTVSTTTGNVISVIGSPEATGKMVPSTNGIANLETGVPQLIPRCADTSLRALDNTKKGGKAGANGQNTSGSPTESLPENKIGSPPKTPVSQAAATSAGPPNIGTEVNSVPPKSSPFVPRVPVYPPHSDNVQYFQDPRTQLPYEVPQYPQTGYYPAPPTVPAGVAPCVPRFVRSNNVPESSLPPASVPYADHYSTFPPRDRLNSPYQPPPPQPYGPVPPVPSGMYAPVYDSRRIWRPQMYPRDDIIRSNSLPPMDVMHSSVYQTSLRERYNSLDGYYSVACQPPSEQRTVPLPREPCGHLKTGYDEQLRRKPEQWAQYHTQKTPLVSSTLPMATPSPTPPSPLFSVDFSTEFSESVSDLSGTKFEEDHLSHYSPWSCGTIGSCINAIDSEPKDVIANSNAVLMDLDSGDVKRRVHLFETQRRAKEEDPIIPFSDGPIISKWGAISRSSRTGYHTTDPIQATASQGSATKPISVSDYVPYVNAVDSRWSAYGSDSASSARYAERDRFIVTDLSGHRKHSSTGDLLSIELQQAKSNSLLLQREANALAMQQKWNSLDEGSRLTLNLLSKEIDLRNGETDYPEDCADTKPDRDIELELSALDTDEPDGQGEQIEEILDIQLGISSQEDQLLNGTTVENGHLLKQHQKESMEQKRQSLGEDLVILEEQKTILPVTSCFSQPITTSVSNASCLPISTSVSVGSLILKTAHIMSEDKNDFLKPVANGRMVNS
SIO_010081: RC3H2
subclass of: SO_0000673
so part of: RC3H2
location: join(1561616..1561846,1563207..1563324,1563775..1564008,1564754..1564929,1565032..1565232,1565603..1565735,1565975..1566093,1566475..1566587,1567160..1567468,1568200..1568414,1569372..1569799,1570222..1570392,1571222..1571377,1571646..1571859,1572024..1572108,1572626..1572707,1572854..1572988,1573532..1573639,1574019..1574167,1574777..1574975)
location: region:1561616-1574975:1
so has part: feature:1561616-1561846:1:exon
so has part: feature:1563207-1563324:1:exon
so has part: feature:1563775-1564008:1:exon
so has part: feature:1564754-1564929:1:exon
so has part: feature:1565032-1565232:1:exon
so has part: feature:1565603-1565735:1:exon
so has part: feature:1565975-1566093:1:exon
so has part: feature:1566475-1566587:1:exon
so has part: feature:1567160-1567468:1:exon
so has part: feature:1568200-1568414:1:exon
so has part: feature:1569372-1569799:1:exon
so has part: feature:1570222-1570392:1:exon
so has part: feature:1571222-1571377:1:exon
so has part: feature:1571646-1571859:1:exon
so has part: feature:1572024-1572108:1:exon
so has part: feature:1572626-1572707:1:exon
so has part: feature:1572854-1572988:1:exon
so has part: feature:1573532-1573639:1:exon
so has part: feature:1574019-1574167:1:exon
so has part: feature:1574777-1574975:1:exon

XP_030817150.1
type: Protein
SIO_000068: ncbiprotein

position:1561616:1
position: 1561616
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1574975:1
position: 1574975
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1561616-1561846:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1563207-1563324:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1563775-1564008:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1564754-1564929:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1565032-1565232:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1565603-1565735:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1565975-1566093:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1566475-1566587:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1567160-1567468:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1568200-1568414:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1569372-1569799:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1570222-1570392:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1571222-1571377:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1571646-1571859:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1572024-1572108:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1572626-1572707:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1572854-1572988:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:1573532-1573639:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:1574019-1574167:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:1574777-1574975:1:exon

RC3H2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 87175
gene: RC3H2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: roquin-2 isoform X2
translation: MPVQAAQWTEFLSCPICYNEFDENVHKPISLGCSHTVCKTCLNKLHRKACPFDQTAINTDIDVLPVNFALLQLVGAQVPDHQTVKLSNVGENKHYEVAKKCVEDLALYLKPLSGGKGVASLNQSALSRPMQRKLVTLVNCQLVEEEGRVRAMRAARSLGERTVTELILQHQNPQQLSANLWAAVRARGCQFLGPAMQEEALKLVLLALEDGSALSRKVLVLFVVQRLEPRFPQASKTSIGHVVQLLYRASCFKVTKRDEDSSLMQLKEEFRSYEALRREHDAQIVHIAMEAGLRISPEQWSSLLYGDLAHKSHMQSIIDKLQSPESFAKSVQELTIVLQRTGDPANLNRLRPHLELLANIDPNPDAASPTWEQLENAMVAVKTVVHGLVDFIQNYSRKGHETPQPQPNSKYKTSMCRDLRQQGGCPRGTNCTFAHSQEELEKYRLRNKKISATVRTFPLLNKVGVNSTVSTTTGNVISVIGSPEATGKMVPSTNGIANLETGVPQLIPRCADTSLRALDNTKKGGKAGANGQNTSGSPTESLPENKIGSPPKTPVSQAAATSAGPPNIGTEVNSVPPKSSPFVPRVPVYPPHSDNVQYFQDPRTQLPYEVPQYPQTGYYPAPPTVPAGVAPCVPRFVRSNNVPESSLPPASVPYADHYSTFPPRDRLNSPYQPPPPQPYGPVPPVPSGMYAPVYDSRRIWRPQMYPRDDIIRSNSLPPMDVMHSSVYQTSLRERYNSLDGYYSVACQPPSEQRTVPLPREPCGHLKTGYDEQLRRKPEQWAQYHTQKTPLVSSTLPMATPSPTPPSPLFSVDFSTEFSESVSDLSGTKFEEDHLSHYSPWSCGTIGSCINAIDSEPKDVIANSNAVLMDLDSGDVKRRVHLFETQRRAKEEDPIIPFSDGPIISKWGAISRSSRTGYHTTDPIQATASQGSATKPISVSDYVPYVNAVDSRWSAYGSDSASSARYAERDRFIVTDLSGHRKHSSTGDLLSIELQQAKSNSLLLQREANALAMQQKWNSLDEGSRLTLNLLSKEIDLRNGETDYPEDCADTKPDRDIELELSALDTDEPDGQGEQIEEILDIQLGISSQEDQLLNGTTVENGHLLKQHQKESMEQKRQSLGRSRKQSCP
SIO_010081: RC3H2
subclass of: SO_0000673
so part of: RC3H2
location: join(1561616..1561846,1563207..1563324,1563775..1564008,1564754..1564929,1565032..1565232,1565603..1565735,1565975..1566093,1566475..1566587,1567160..1567468,1568200..1568414,1569372..1569799,1570222..1570392,1571222..1571377,1571646..1571859,1572024..1572108,1572626..1572707,1572854..1572988,1573532..1573639,1574019..1574148,1574777..1574805)
location: region:1561616-1574805:1
so has part: feature:1561616-1561846:1:exon
so has part: feature:1563207-1563324:1:exon
so has part: feature:1563775-1564008:1:exon
so has part: feature:1564754-1564929:1:exon
so has part: feature:1565032-1565232:1:exon
so has part: feature:1565603-1565735:1:exon
so has part: feature:1565975-1566093:1:exon
so has part: feature:1566475-1566587:1:exon
so has part: feature:1567160-1567468:1:exon
so has part: feature:1568200-1568414:1:exon
so has part: feature:1569372-1569799:1:exon
so has part: feature:1570222-1570392:1:exon
so has part: feature:1571222-1571377:1:exon
so has part: feature:1571646-1571859:1:exon
so has part: feature:1572024-1572108:1:exon
so has part: feature:1572626-1572707:1:exon
so has part: feature:1572854-1572988:1:exon
so has part: feature:1573532-1573639:1:exon
so has part: feature:1574019-1574148:1:exon
so has part: feature:1574777-1574805:1:exon

XP_030817151.1
type: Protein
SIO_000068: ncbiprotein

position:1574805:1
position: 1574805
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1561616-1561846:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1563207-1563324:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1563775-1564008:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1564754-1564929:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1565032-1565232:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1565603-1565735:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1565975-1566093:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1566475-1566587:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1567160-1567468:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1568200-1568414:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1569372-1569799:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1570222-1570392:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1571222-1571377:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1571646-1571859:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1572024-1572108:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1572626-1572707:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1572854-1572988:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:1573532-1573639:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:1574019-1574148:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:1574777-1574805:1:exon

LOC115911090
type: Gene
subclass of: SO_0000704
RO_0002162: 87175
gene: LOC115911090
note: Derived by automated computational analysis using gene prediction method: cmsearch.
so part of: sequence
location: 1565401..1565512
location: region:1565401-1565512:1
so has part: feature:1565401-1565512:1:exon
subclass of: SO_0000578

115911090
type: Gene
SIO_000068: ncbigene

position:1565401:1
position: 1565401
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1565512:1
position: 1565512
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1565401-1565512:1:exon

LOC115911090
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 87175
nc RNA class: snoRNA
gene: LOC115911090
product: small nucleolar RNA SNORD90
inference: COORDINATES: nucleotide motif:Rfam:12.0:RF00579
inference: COORDINATES: profile:INFERNAL:1.1.1
note: Derived by automated computational analysis using gene prediction method: cmsearch.
transcript id: XR_004061237.1
SIO_010081: LOC115911090
subclass of: SO_0000673
so part of: LOC115911090
location: 1565401..1565512
location: region:1565401-1565512:1
so has part: feature:1565401-1565512:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1565401-1565512:1:exon

PDCL
type: Gene
subclass of: SO_0000704
RO_0002162: 87175
gene: PDCL
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1580283..1584702
location: region:1580283-1584702:1
so has part: feature:1580283-1584702:1:exon
subclass of: SO_0000010

115910835
type: Gene
SIO_000068: ncbigene

position:1580283:1
position: 1580283
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1584702:1
position: 1584702
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1580283-1584702:1:exon

PDCL
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 87175
gene: PDCL
product: phosducin like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 10 ESTs, 8 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
transcript id: XM_030961315.1
SIO_010081: PDCL
subclass of: SO_0000673
so part of: PDCL
location: join(1580283..1580364,1580848..1580891,1581200..1581374,1581985..1582166,1583056..1584702)
location: region:1580283-1584702:1
so has part: feature:1580283-1580364:1:exon
so has part: feature:1580848-1580891:1:exon
so has part: feature:1581200-1581374:1:exon
so has part: feature:1581985-1582166:1:exon
so has part: feature:1583056-1584702:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1580283-1580364:1:exon

position:1580364:1
position: 1580364
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1580848-1580891:1:exon

position:1580848:1
position: 1580848
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1580891:1
position: 1580891
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1581200-1581374:1:exon

position:1581200:1
position: 1581200
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1581374:1
position: 1581374
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1581985-1582166:1:exon

position:1581985:1
position: 1581985
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1582166:1
position: 1582166
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1583056-1584702:1:exon

position:1583056:1
position: 1583056
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

PDCL
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 87175
gene: PDCL
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: phosducin-like protein
translation: MTTADDKLLGEKLQYYYSSSEGEDEDSEKEDKEGESSIPESVGEVELSSDGSAVNTGPKGVINDWRRFKQLETEQRQEQRREMERLIKKLSMTCRSHLDDEAEQQKQKELQEKINGKMTLQEYSMIHNDEDDEEFLQRYRKQRMEEMRQQLYSGQQFKQVFEIASGEAFLDTVDKEHKSTLIMIHIYEDDIPGTESLNGCMICLAAEYPTVKFCRVKSSLIGASTRFTNNALPALLVYKAGELIGNFVRITDQLGEDFFAVDLEAFLQECGLLPEKDLLLLTSIHNPSACYSEDSDLEID
SIO_010081: PDCL
subclass of: SO_0000673
so part of: PDCL
location: join(1581206..1581374,1581985..1582166,1583056..1583607)
location: region:1581206-1583607:1
so has part: feature:1581206-1581374:1:exon
so has part: feature:1581985-1582166:1:exon
so has part: feature:1583056-1583607:1:exon

XP_030817175.1
type: Protein
SIO_000068: ncbiprotein

position:1581206:1
position: 1581206
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1583607:1
position: 1583607
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1581206-1581374:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1581985-1582166:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1583056-1583607:1:exon

PTGS1
type: Gene
subclass of: SO_0000704
RO_0002162: 87175
gene: PTGS1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1587255..1597396)
location: region:1587255-1597396:-1
so has part: feature:1587255-1597396:-1:exon
subclass of: SO_0000010

115910842
type: Gene
SIO_000068: ncbigene

position:1587255:-1
position: 1587255
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1597396:-1
position: 1597396
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1587255-1597396:-1:exon

PTGS1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 87175
gene: PTGS1
product: prostaglandin-endoperoxide synthase 1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, 34 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_030961326.1
SIO_010081: PTGS1
subclass of: SO_0000673
so part of: PTGS1
location: complement(join(1587255..1588070,1588148..1588521,1588859..1589006,1589646..1589932,1590215..1590461,1590778..1590861,1590948..1591129,1591483..1591626,1592367..1592507,1592629..1592745,1597261..1597396))
location: region:1587255-1597396:-1
so has part: feature:1597261-1597396:-1:exon
so has part: feature:1592629-1592745:-1:exon
so has part: feature:1592367-1592507:-1:exon
so has part: feature:1591483-1591626:-1:exon
so has part: feature:1590948-1591129:-1:exon
so has part: feature:1590778-1590861:-1:exon
so has part: feature:1590215-1590461:-1:exon
so has part: feature:1589646-1589932:-1:exon
so has part: feature:1588859-1589006:-1:exon
so has part: feature:1588148-1588521:-1:exon
so has part: feature:1587255-1588070:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1597261-1597396:-1:exon

position:1597261:-1
position: 1597261
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1592629-1592745:-1:exon

position:1592629:-1
position: 1592629
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1592745:-1
position: 1592745
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1592367-1592507:-1:exon

position:1592367:-1
position: 1592367
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1592507:-1
position: 1592507
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1591483-1591626:-1:exon

position:1591483:-1
position: 1591483
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1591626:-1
position: 1591626
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1590948-1591129:-1:exon

position:1590948:-1
position: 1590948
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1591129:-1
position: 1591129
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1590778-1590861:-1:exon

position:1590778:-1
position: 1590778
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1590861:-1
position: 1590861
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1590215-1590461:-1:exon

position:1590215:-1
position: 1590215
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1590461:-1
position: 1590461
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1589646-1589932:-1:exon

position:1589646:-1
position: 1589646
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1589932:-1
position: 1589932
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:1588859-1589006:-1:exon

position:1588859:-1
position: 1588859
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1589006:-1
position: 1589006
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:1588148-1588521:-1:exon

position:1588148:-1
position: 1588148
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1588521:-1
position: 1588521
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:1587255-1588070:-1:exon

position:1588070:-1
position: 1588070
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

PTGS1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 87175
gene: PTGS1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: prostaglandin G/H synthase 1
translation: MGGGCRARAPPAAGLRLLLAHAVLLCAAGSAAGTGSVNPCCYFPCQNQGVCVRVGLRGYECDCTRTGYYGLNCTSPEFWTRLHNLLKPSPAFYHFILTHFKWVWDIINSTFIRDTLMRLVLTVRANLIPSPPTFNSDYGYISWEAYANVSYYTRVLPPVPDDCPTPMGTKGKLQLPDPQLLAERFLLRHKFEADPRGTNMMFAFFAQHFTHQFFKTSGKMGRGFTKALGHGVDLGHLYGDNLQRQHQLRLFRDGKLKFQVVDGEVYPPTVSEAPVHMVYPSGVPQEQQLAVGQEVFGLLPGLCVYATLWLREHNRVCDLLKREHPTWSDEQLFQTARLILIGETIKIVVEDYVQHLSGYYLSLKFDPELLFGSQFQYRNRIAVEFNQLYHWHGLMPDSFIIQGQEYSYKQFLYNTSMLMDYGVEALVESFSKQVAGRIGGGQTINANVLHVAVGVIKESRQLRLQPFNEYRKRFGMKPYKSFQELTGEEEKAAELEELYGDIDALEFYPGLLLEKPQPNGIFGESMVEIGAPFSLKGLFGNPICSPEYWKPSTFGGATGFEIVKTASLEKLVCLNVKKCPYVAFHVPDTAEHGSPRAAGSSTEL
SIO_010081: PTGS1
subclass of: SO_0000673
so part of: PTGS1
location: complement(join(1588166..1588521,1588859..1589006,1589646..1589932,1590215..1590461,1590778..1590861,1590948..1591129,1591483..1591626,1592367..1592507,1592629..1592745,1597261..1597369))
location: region:1588166-1597369:-1
so has part: feature:1597261-1597369:-1:exon
so has part: feature:1592629-1592745:-1:exon
so has part: feature:1592367-1592507:-1:exon
so has part: feature:1591483-1591626:-1:exon
so has part: feature:1590948-1591129:-1:exon
so has part: feature:1590778-1590861:-1:exon
so has part: feature:1590215-1590461:-1:exon
so has part: feature:1589646-1589932:-1:exon
so has part: feature:1588859-1589006:-1:exon
so has part: feature:1588166-1588521:-1:exon

XP_030817186.1
type: Protein
SIO_000068: ncbiprotein

position:1588166:-1
position: 1588166
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1597369:-1
position: 1597369
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1597261-1597369:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1592629-1592745:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1592367-1592507:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1591483-1591626:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1590948-1591129:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1590778-1590861:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1590215-1590461:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1589646-1589932:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1588859-1589006:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1588166-1588521:-1:exon

MRRF
type: Gene
subclass of: SO_0000704
RO_0002162: 87175
gene: MRRF
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1605550..1618047)
location: region:1605550-1618047:-1
so has part: feature:1605550-1618047:-1:exon
subclass of: SO_0000010

115910920
type: Gene
SIO_000068: ncbigene

position:1605550:-1
position: 1605550
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1618047:-1
position: 1618047
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1605550-1618047:-1:exon

MRRF
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 87175
gene: MRRF
product: mitochondrial ribosome recycling factor, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 mRNAs, 1 EST, 16 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
transcript id: XM_030961474.1
SIO_010081: MRRF
subclass of: SO_0000673
so part of: MRRF
location: complement(join(1605550..1605946,1607033..1607192,1612483..1612574,1615186..1615304,1616515..1616670,1616916..1617111,1617993..1618047))
location: region:1605550-1618047:-1
so has part: feature:1617993-1618047:-1:exon
so has part: feature:1616916-1617111:-1:exon
so has part: feature:1616515-1616670:-1:exon
so has part: feature:1615186-1615304:-1:exon
so has part: feature:1612483-1612574:-1:exon
so has part: feature:1607033-1607192:-1:exon
so has part: feature:1605550-1605946:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1617993-1618047:-1:exon

position:1617993:-1
position: 1617993
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1616916-1617111:-1:exon

position:1616916:-1
position: 1616916
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1617111:-1
position: 1617111
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1616515-1616670:-1:exon

position:1616515:-1
position: 1616515
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1616670:-1
position: 1616670
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1615186-1615304:-1:exon

position:1615186:-1
position: 1615186
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1615304:-1
position: 1615304
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1612483-1612574:-1:exon

position:1612483:-1
position: 1612483
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1612574:-1
position: 1612574
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1607033-1607192:-1:exon

position:1607033:-1
position: 1607033
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1607192:-1
position: 1607192
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1605550-1605946:-1:exon

position:1605946:-1
position: 1605946
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

MRRF
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 87175
gene: MRRF
product: mitochondrial ribosome recycling factor, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 mRNAs, 1 EST, 16 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_030961472.1
SIO_010081: MRRF
subclass of: SO_0000673
so part of: MRRF
location: complement(join(1605550..1605946,1607033..1607192,1612483..1612574,1615186..1615304,1616515..1616670,1616916..1617111,1617835..1618040))
location: region:1605550-1618040:-1
so has part: feature:1617835-1618040:-1:exon
so has part: feature:1616916-1617111:-1:exon
so has part: feature:1616515-1616670:-1:exon
so has part: feature:1615186-1615304:-1:exon
so has part: feature:1612483-1612574:-1:exon
so has part: feature:1607033-1607192:-1:exon
so has part: feature:1605550-1605946:-1:exon

position:1618040:-1
position: 1618040
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1617835-1618040:-1:exon

position:1617835:-1
position: 1617835
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1616916-1617111:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1616515-1616670:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1615186-1615304:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1612483-1612574:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1607033-1607192:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1605550-1605946:-1:exon

MRRF
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 87175
gene: MRRF
product: mitochondrial ribosome recycling factor, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 mRNAs, 1 EST, 16 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_030961475.1
SIO_010081: MRRF
subclass of: SO_0000673
so part of: MRRF
location: complement(join(1605550..1605946,1607033..1607192,1612483..1612574,1615186..1615304,1616515..1616670,1616916..1617111,1617190..1617610))
location: region:1605550-1617610:-1
so has part: feature:1617190-1617610:-1:exon
so has part: feature:1616916-1617111:-1:exon
so has part: feature:1616515-1616670:-1:exon
so has part: feature:1615186-1615304:-1:exon
so has part: feature:1612483-1612574:-1:exon
so has part: feature:1607033-1607192:-1:exon
so has part: feature:1605550-1605946:-1:exon

position:1617610:-1
position: 1617610
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1617190-1617610:-1:exon

position:1617190:-1
position: 1617190
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1616916-1617111:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1616515-1616670:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1615186-1615304:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1612483-1612574:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1607033-1607192:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1605550-1605946:-1:exon

MRRF
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 87175
gene: MRRF
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: ribosome-recycling factor, mitochondrial isoform X1
translation: MTLSGGAGPRYGERGDGARPSPPPFPSPWPPPGSDPGPRYPVLGAAFHGGQGRADRAVLSSGSGVGTQHSAMALALRCLRPLPPLLLRSAPAVARALPRAPGGCPAPLPGGCSRCVQHLLLSRQLATKKAKGKGQSQAKVNISAALVEDIINLEETSEDMQAVIEALKEDFSRNLSVRTSPGALDHITVVTKDGKFPLNQLGQISQKSPQLLTVNMSSFPESTAAAAKAIRESGMNLNPEVDGTVIRVPVPKVTREHRESLAKLAKQSTNKSKEALRKVRSKSITQVKKSKNKVSEDTIWLLEKQIQQMADEAAAEMDKLLAAKTKELLG
SIO_010081: MRRF
subclass of: SO_0000673
so part of: MRRF
location: complement(join(1605869..1605946,1607033..1607192,1612483..1612574,1615186..1615304,1616515..1616670,1616916..1617111,1617835..1618026))
location: region:1605869-1618026:-1
so has part: feature:1617835-1618026:-1:exon
so has part: feature:1616916-1617111:-1:exon
so has part: feature:1616515-1616670:-1:exon
so has part: feature:1615186-1615304:-1:exon
so has part: feature:1612483-1612574:-1:exon
so has part: feature:1607033-1607192:-1:exon
so has part: feature:1605869-1605946:-1:exon

XP_030817332.1
type: Protein
SIO_000068: ncbiprotein

position:1605869:-1
position: 1605869
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1618026:-1
position: 1618026
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1617835-1618026:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1616916-1617111:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1616515-1616670:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1615186-1615304:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1612483-1612574:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1607033-1607192:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1605869-1605946:-1:exon

MRRF
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 87175
gene: MRRF
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: ribosome-recycling factor, mitochondrial isoform X3
translation: MALALRCLRPLPPLLLRSAPAVARALPRAPGGCPAPLPGGCSRCVQHLLLSRQLATKKAKGKGQSQAKVNISAALVEDIINLEETSEDMQAVIEALKEDFSRNLSVRTSPGALDHITVVTKDGKFPLNQLGQISQKSPQLLTVNMSSFPESTAAAAKAIRESGMNLNPEVDGTVIRVPVPKVTREHRESLAKLAKQSTNKSKEALRKVRSKSITQVKKSKNKVSEDTIWLLEKQIQQMADEAAAEMDKLLAAKTKELLG
SIO_010081: MRRF
subclass of: SO_0000673
so part of: MRRF
location: complement(join(1605869..1605946,1607033..1607192,1612483..1612574,1615186..1615304,1616515..1616670,1616916..1617090))
location: region:1605869-1617090:-1
so has part: feature:1616916-1617090:-1:exon
so has part: feature:1616515-1616670:-1:exon
so has part: feature:1615186-1615304:-1:exon
so has part: feature:1612483-1612574:-1:exon
so has part: feature:1607033-1607192:-1:exon
so has part: feature:1605869-1605946:-1:exon

XP_030817334.1
type: Protein
SIO_000068: ncbiprotein

position:1617090:-1
position: 1617090
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1616916-1617090:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1616515-1616670:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1615186-1615304:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1612483-1612574:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1607033-1607192:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1605869-1605946:-1:exon

MRRF
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 87175
gene: MRRF
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: ribosome-recycling factor, mitochondrial isoform X3
translation: MALALRCLRPLPPLLLRSAPAVARALPRAPGGCPAPLPGGCSRCVQHLLLSRQLATKKAKGKGQSQAKVNISAALVEDIINLEETSEDMQAVIEALKEDFSRNLSVRTSPGALDHITVVTKDGKFPLNQLGQISQKSPQLLTVNMSSFPESTAAAAKAIRESGMNLNPEVDGTVIRVPVPKVTREHRESLAKLAKQSTNKSKEALRKVRSKSITQVKKSKNKVSEDTIWLLEKQIQQMADEAAAEMDKLLAAKTKELLG
SIO_010081: MRRF
subclass of: SO_0000673
so part of: MRRF
location: complement(join(1605869..1605946,1607033..1607192,1612483..1612574,1615186..1615304,1616515..1616670,1616916..1617090))
location: region:1605869-1617090:-1
so has part: feature:1616916-1617090:-1:exon
so has part: feature:1616515-1616670:-1:exon
so has part: feature:1615186-1615304:-1:exon
so has part: feature:1612483-1612574:-1:exon
so has part: feature:1607033-1607192:-1:exon
so has part: feature:1605869-1605946:-1:exon

XP_030817335.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1616916-1617090:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1616515-1616670:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1615186-1615304:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1612483-1612574:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1607033-1607192:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1605869-1605946:-1:exon

MRRF
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 87175
gene: MRRF
product: mitochondrial ribosome recycling factor, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_030961473.1
SIO_010081: MRRF
subclass of: SO_0000673
so part of: MRRF
location: complement(join(1607224..1607482,1612483..1612574,1615186..1615304,1616515..1616670,1616916..1617111,1617835..1618040))
location: region:1607224-1618040:-1
so has part: feature:1617835-1618040:-1:exon
so has part: feature:1616916-1617111:-1:exon
so has part: feature:1616515-1616670:-1:exon
so has part: feature:1615186-1615304:-1:exon
so has part: feature:1612483-1612574:-1:exon
so has part: feature:1607224-1607482:-1:exon

position:1607224:-1
position: 1607224
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1617835-1618040:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1616916-1617111:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1616515-1616670:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1615186-1615304:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1612483-1612574:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1607224-1607482:-1:exon

position:1607482:-1
position: 1607482
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

MRRF
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 87175
gene: MRRF
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: ribosome-recycling factor, mitochondrial isoform X2
translation: MTLSGGAGPRYGERGDGARPSPPPFPSPWPPPGSDPGPRYPVLGAAFHGGQGRADRAVLSSGSGVGTQHSAMALALRCLRPLPPLLLRSAPAVARALPRAPGGCPAPLPGGCSRCVQHLLLSRQLATKKAKGKGQSQAKVNISAALVEDIINLEETSEDMQAVIEALKEDFSRNLSVRTSPGALDHITVVTKDGKFPLNQLGQISQKSPQLLTVNMSSFPESTAAAAKAIRESGMNLNPEVDGTVIRVPVPKFKTASLECCAELADFPRWTKAE
SIO_010081: MRRF
subclass of: SO_0000673
so part of: MRRF
location: complement(join(1607413..1607482,1612483..1612574,1615186..1615304,1616515..1616670,1616916..1617111,1617835..1618026))
location: region:1607413-1618026:-1
so has part: feature:1617835-1618026:-1:exon
so has part: feature:1616916-1617111:-1:exon
so has part: feature:1616515-1616670:-1:exon
so has part: feature:1615186-1615304:-1:exon
so has part: feature:1612483-1612574:-1:exon
so has part: feature:1607413-1607482:-1:exon

XP_030817333.1
type: Protein
SIO_000068: ncbiprotein

position:1607413:-1
position: 1607413
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1617835-1618026:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1616916-1617111:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1616515-1616670:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1615186-1615304:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1612483-1612574:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1607413-1607482:-1:exon

RBM18
type: Gene
subclass of: SO_0000704
RO_0002162: 87175
gene: RBM18
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1617833..1629567
location: region:1617833-1629567:1
so has part: feature:1617833-1629567:1:exon
subclass of: SO_0000010

115910921
type: Gene
SIO_000068: ncbigene

position:1617833:1
position: 1617833
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1629567:1
position: 1629567
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1617833-1629567:1:exon

RBM18
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 87175
gene: RBM18
product: RNA binding motif protein 18
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 30 ESTs, 10 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
transcript id: XM_030961476.1
SIO_010081: RBM18
subclass of: SO_0000673
so part of: RBM18
location: join(1617833..1618236,1623753..1623879,1624429..1624515,1626264..1626349,1627692..1629567)
location: region:1617833-1629567:1
so has part: feature:1617833-1618236:1:exon
so has part: feature:1623753-1623879:1:exon
so has part: feature:1624429-1624515:1:exon
so has part: feature:1626264-1626349:1:exon
so has part: feature:1627692-1629567:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1617833-1618236:1:exon

position:1618236:1
position: 1618236
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1623753-1623879:1:exon

position:1623753:1
position: 1623753
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1623879:1
position: 1623879
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1624429-1624515:1:exon

position:1624429:1
position: 1624429
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1624515:1
position: 1624515
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1626264-1626349:1:exon

position:1626264:1
position: 1626264
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1626349:1
position: 1626349
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1627692-1629567:1:exon

position:1627692:1
position: 1627692
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

RBM18
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 87175
gene: RBM18
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: probable RNA-binding protein 18
translation: MEPGRQALPLENASILSEGALQDGHRLWIGNLDPKITEYHLLKLLQKFGKVKQFDFLFHKSGALEGQPRGYCFVNFETKQEAEKAIQCLNGKLALSKKLVVRWAHAQVKRYDHNKNEKILPISLEPSSSTEPPQSNLSVSAKIKAIEAKLKMMAENPDAEYPAAPVYSYFKPPDKKRTTPYSRAAWKSRR
SIO_010081: RBM18
subclass of: SO_0000673
so part of: RBM18
location: join(1618124..1618236,1623753..1623879,1624429..1624515,1626264..1626349,1627692..1627851)
location: region:1618124-1627851:1
so has part: feature:1618124-1618236:1:exon
so has part: feature:1623753-1623879:1:exon
so has part: feature:1624429-1624515:1:exon
so has part: feature:1626264-1626349:1:exon
so has part: feature:1627692-1627851:1:exon

XP_030817336.1
type: Protein
SIO_000068: ncbiprotein

position:1618124:1
position: 1618124
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1627851:1
position: 1627851
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1618124-1618236:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1623753-1623879:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1624429-1624515:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1626264-1626349:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1627692-1627851:1:exon

LHX6
type: Gene
subclass of: SO_0000704
RO_0002162: 87175
gene: LHX6
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1631634..1648108
location: region:1631634-1648108:1
so has part: feature:1631634-1648108:1:exon
subclass of: SO_0000010

115910944
type: Gene
SIO_000068: ncbigene

position:1631634:1
position: 1631634
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1648108:1
position: 1648108
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1631634-1648108:1:exon

LHX6
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 87175
gene: LHX6
product: LIM homeobox 6, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 ESTs, 24 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_030961526.1
SIO_010081: LHX6
subclass of: SO_0000673
so part of: LHX6
location: join(1631634..1631711,1632220..1632360,1632658..1632840,1632917..1633038,1638226..1638446,1640655..1640755,1640846..1640941,1642076..1642250,1642764..1642867,1644540..1648108)
location: region:1631634-1648108:1
so has part: feature:1631634-1631711:1:exon
so has part: feature:1632220-1632360:1:exon
so has part: feature:1632658-1632840:1:exon
so has part: feature:1632917-1633038:1:exon
so has part: feature:1638226-1638446:1:exon
so has part: feature:1640655-1640755:1:exon
so has part: feature:1640846-1640941:1:exon
so has part: feature:1642076-1642250:1:exon
so has part: feature:1642764-1642867:1:exon
so has part: feature:1644540-1648108:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1631634-1631711:1:exon

position:1631711:1
position: 1631711
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1632220-1632360:1:exon

position:1632220:1
position: 1632220
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1632360:1
position: 1632360
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1632658-1632840:1:exon

position:1632658:1
position: 1632658
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1632840:1
position: 1632840
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1632917-1633038:1:exon

position:1632917:1
position: 1632917
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1633038:1
position: 1633038
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1638226-1638446:1:exon

position:1638226:1
position: 1638226
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1638446:1
position: 1638446
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1640655-1640755:1:exon

position:1640655:1
position: 1640655
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1640755:1
position: 1640755
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1640846-1640941:1:exon

position:1640846:1
position: 1640846
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1640941:1
position: 1640941
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1642076-1642250:1:exon

position:1642076:1
position: 1642076
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1642250:1
position: 1642250
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:1642764-1642867:1:exon

position:1642764:1
position: 1642764
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1642867:1
position: 1642867
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:1644540-1648108:1:exon

position:1644540:1
position: 1644540
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LHX6
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 87175
gene: LHX6
product: LIM homeobox 6, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 ESTs, 23 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_030961527.1
SIO_010081: LHX6
subclass of: SO_0000673
so part of: LHX6
location: join(1631635..1631711,1632295..1632360,1632658..1632840,1632917..1633038,1638226..1638446,1640655..1640755,1640846..1640941,1642076..1642250,1642764..1642867,1644540..1648108)
location: region:1631635-1648108:1
so has part: feature:1631635-1631711:1:exon
so has part: feature:1632295-1632360:1:exon
so has part: feature:1632658-1632840:1:exon
so has part: feature:1632917-1633038:1:exon
so has part: feature:1638226-1638446:1:exon
so has part: feature:1640655-1640755:1:exon
so has part: feature:1640846-1640941:1:exon
so has part: feature:1642076-1642250:1:exon
so has part: feature:1642764-1642867:1:exon
so has part: feature:1644540-1648108:1:exon

position:1631635:1
position: 1631635
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1631635-1631711:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1632295-1632360:1:exon

position:1632295:1
position: 1632295
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1632658-1632840:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1632917-1633038:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1638226-1638446:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1640655-1640755:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1640846-1640941:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1642076-1642250:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1642764-1642867:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1644540-1648108:1:exon

LHX6
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 87175
gene: LHX6
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: LIM/homeobox protein Lhx6 isoform X1
translation: MHRSHGGGQPRGPGRRAPAGAQAGKAVYIGCPALARRMEPQPPSPALSIKVMPPEPLPKGSARCLDPHSRAMSQSDGEPLPGALEKEDARSAPSTPSTPSVCSPPSSSSSTPSAGKNVCSSCGLEILDRYLLKVNNLIWHVRCLECSVCRTSLRQQHSCYIKNKEIFCKMDYFSRFGTKCARCGRQIYASDWVRRARGNAYHLACFACFSCKRQLSTGEEFGLVEEKVLCRIHYDTMIENLKRAAENGNGITLEGAVPSEQDSQPKPAKRARTSFTAEQLQVMQAQFAQDNNPDAQTLQKLADMTGLSRRVIQVWFQNCRARHKKHTPQHTVPPSGAPPSRIPSSLSDDIHYSPFSSPERARMVTLHGYIESQVQCGQVHCRLPYTAPPVHLKADMEGPLSNRGEKVILFQY
SIO_010081: LHX6
subclass of: SO_0000673
so part of: LHX6
location: join(1631637..1631711,1632220..1632360,1632658..1632840,1632917..1633038,1638226..1638446,1640655..1640755,1640846..1640941,1642076..1642250,1642764..1642867,1644540..1644560)
location: region:1631637-1644560:1
so has part: feature:1631637-1631711:1:exon
so has part: feature:1632220-1632360:1:exon
so has part: feature:1632658-1632840:1:exon
so has part: feature:1632917-1633038:1:exon
so has part: feature:1638226-1638446:1:exon
so has part: feature:1640655-1640755:1:exon
so has part: feature:1640846-1640941:1:exon
so has part: feature:1642076-1642250:1:exon
so has part: feature:1642764-1642867:1:exon
so has part: feature:1644540-1644560:1:exon

XP_030817386.1
type: Protein
SIO_000068: ncbiprotein

position:1631637:1
position: 1631637
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1644560:1
position: 1644560
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1631637-1631711:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1632220-1632360:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1632658-1632840:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1632917-1633038:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1638226-1638446:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1640655-1640755:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1640846-1640941:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1642076-1642250:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1642764-1642867:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1644540-1644560:1:exon

LHX6
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 87175
gene: LHX6
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: LIM/homeobox protein Lhx6 isoform X2
translation: MHRSHGGGQPRGPGRRAPAGAQAGKVMPPEPLPKGSARCLDPHSRAMSQSDGEPLPGALEKEDARSAPSTPSTPSVCSPPSSSSSTPSAGKNVCSSCGLEILDRYLLKVNNLIWHVRCLECSVCRTSLRQQHSCYIKNKEIFCKMDYFSRFGTKCARCGRQIYASDWVRRARGNAYHLACFACFSCKRQLSTGEEFGLVEEKVLCRIHYDTMIENLKRAAENGNGITLEGAVPSEQDSQPKPAKRARTSFTAEQLQVMQAQFAQDNNPDAQTLQKLADMTGLSRRVIQVWFQNCRARHKKHTPQHTVPPSGAPPSRIPSSLSDDIHYSPFSSPERARMVTLHGYIESQVQCGQVHCRLPYTAPPVHLKADMEGPLSNRGEKVILFQY
SIO_010081: LHX6
subclass of: SO_0000673
so part of: LHX6
location: join(1631637..1631711,1632295..1632360,1632658..1632840,1632917..1633038,1638226..1638446,1640655..1640755,1640846..1640941,1642076..1642250,1642764..1642867,1644540..1644560)
location: region:1631637-1644560:1
so has part: feature:1631637-1631711:1:exon
so has part: feature:1632295-1632360:1:exon
so has part: feature:1632658-1632840:1:exon
so has part: feature:1632917-1633038:1:exon
so has part: feature:1638226-1638446:1:exon
so has part: feature:1640655-1640755:1:exon
so has part: feature:1640846-1640941:1:exon
so has part: feature:1642076-1642250:1:exon
so has part: feature:1642764-1642867:1:exon
so has part: feature:1644540-1644560:1:exon

XP_030817387.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1631637-1631711:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1632295-1632360:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1632658-1632840:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1632917-1633038:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1638226-1638446:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1640655-1640755:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1640846-1640941:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1642076-1642250:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1642764-1642867:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1644540-1644560:1:exon

LHX6
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 87175
gene: LHX6
product: LIM homeobox 6, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 ESTs, 23 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_030961529.1
SIO_010081: LHX6
subclass of: SO_0000673
so part of: LHX6
location: join(1631765..1632034,1632295..1632360,1632658..1632840,1632917..1633038,1638226..1638446,1640655..1640755,1640846..1640941,1642076..1642250,1642764..1642867,1644540..1648108)
location: region:1631765-1648108:1
so has part: feature:1631765-1632034:1:exon
so has part: feature:1632295-1632360:1:exon
so has part: feature:1632658-1632840:1:exon
so has part: feature:1632917-1633038:1:exon
so has part: feature:1638226-1638446:1:exon
so has part: feature:1640655-1640755:1:exon
so has part: feature:1640846-1640941:1:exon
so has part: feature:1642076-1642250:1:exon
so has part: feature:1642764-1642867:1:exon
so has part: feature:1644540-1648108:1:exon

position:1631765:1
position: 1631765
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1631765-1632034:1:exon

position:1632034:1
position: 1632034
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1632295-1632360:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1632658-1632840:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1632917-1633038:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1638226-1638446:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1640655-1640755:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1640846-1640941:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1642076-1642250:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1642764-1642867:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1644540-1648108:1:exon

LHX6
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 87175
gene: LHX6
product: LIM homeobox 6, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 ESTs, 24 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_030961528.1
SIO_010081: LHX6
subclass of: SO_0000673
so part of: LHX6
location: join(1631765..1631992,1632220..1632360,1632658..1632840,1632917..1633038,1638226..1638446,1640655..1640755,1640846..1640941,1642076..1642250,1642764..1642867,1644540..1648108)
location: region:1631765-1648108:1
so has part: feature:1631765-1631992:1:exon
so has part: feature:1632220-1632360:1:exon
so has part: feature:1632658-1632840:1:exon
so has part: feature:1632917-1633038:1:exon
so has part: feature:1638226-1638446:1:exon
so has part: feature:1640655-1640755:1:exon
so has part: feature:1640846-1640941:1:exon
so has part: feature:1642076-1642250:1:exon
so has part: feature:1642764-1642867:1:exon
so has part: feature:1644540-1648108:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1631765-1631992:1:exon

position:1631992:1
position: 1631992
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1632220-1632360:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1632658-1632840:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1632917-1633038:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1638226-1638446:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1640655-1640755:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1640846-1640941:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1642076-1642250:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1642764-1642867:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1644540-1648108:1:exon

LHX6
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 87175
gene: LHX6
product: LIM homeobox 6, transcript variant X5
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 ESTs, 23 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_030961530.1
SIO_010081: LHX6
subclass of: SO_0000673
so part of: LHX6
location: join(1631765..1631992,1632295..1632360,1632658..1632840,1632917..1633038,1638226..1638446,1640655..1640755,1640846..1640941,1642076..1642250,1642764..1642867,1644540..1648108)
location: region:1631765-1648108:1
so has part: feature:1631765-1631992:1:exon
so has part: feature:1632295-1632360:1:exon
so has part: feature:1632658-1632840:1:exon
so has part: feature:1632917-1633038:1:exon
so has part: feature:1638226-1638446:1:exon
so has part: feature:1640655-1640755:1:exon
so has part: feature:1640846-1640941:1:exon
so has part: feature:1642076-1642250:1:exon
so has part: feature:1642764-1642867:1:exon
so has part: feature:1644540-1648108:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1631765-1631992:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1632295-1632360:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1632658-1632840:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1632917-1633038:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1638226-1638446:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1640655-1640755:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1640846-1640941:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1642076-1642250:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1642764-1642867:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1644540-1648108:1:exon

LHX6
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 87175
gene: LHX6
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: LIM/homeobox protein Lhx6 isoform X3
translation: MEPQPPSPALSIKVMPPEPLPKGSARCLDPHSRAMSQSDGEPLPGALEKEDARSAPSTPSTPSVCSPPSSSSSTPSAGKNVCSSCGLEILDRYLLKVNNLIWHVRCLECSVCRTSLRQQHSCYIKNKEIFCKMDYFSRFGTKCARCGRQIYASDWVRRARGNAYHLACFACFSCKRQLSTGEEFGLVEEKVLCRIHYDTMIENLKRAAENGNGITLEGAVPSEQDSQPKPAKRARTSFTAEQLQVMQAQFAQDNNPDAQTLQKLADMTGLSRRVIQVWFQNCRARHKKHTPQHTVPPSGAPPSRIPSSLSDDIHYSPFSSPERARMVTLHGYIESQVQCGQVHCRLPYTAPPVHLKADMEGPLSNRGEKVILFQY
SIO_010081: LHX6
subclass of: SO_0000673
so part of: LHX6
location: join(1632256..1632360,1632658..1632840,1632917..1633038,1638226..1638446,1640655..1640755,1640846..1640941,1642076..1642250,1642764..1642867,1644540..1644560)
location: region:1632256-1644560:1
so has part: feature:1632256-1632360:1:exon
so has part: feature:1632658-1632840:1:exon
so has part: feature:1632917-1633038:1:exon
so has part: feature:1638226-1638446:1:exon
so has part: feature:1640655-1640755:1:exon
so has part: feature:1640846-1640941:1:exon
so has part: feature:1642076-1642250:1:exon
so has part: feature:1642764-1642867:1:exon
so has part: feature:1644540-1644560:1:exon

XP_030817388.1
type: Protein
SIO_000068: ncbiprotein

position:1632256:1
position: 1632256
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1632256-1632360:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1632658-1632840:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1632917-1633038:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1638226-1638446:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1640655-1640755:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1640846-1640941:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1642076-1642250:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1642764-1642867:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1644540-1644560:1:exon

LHX6
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 87175
gene: LHX6
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: LIM/homeobox protein Lhx6 isoform X4
translation: MPPEPLPKGSARCLDPHSRAMSQSDGEPLPGALEKEDARSAPSTPSTPSVCSPPSSSSSTPSAGKNVCSSCGLEILDRYLLKVNNLIWHVRCLECSVCRTSLRQQHSCYIKNKEIFCKMDYFSRFGTKCARCGRQIYASDWVRRARGNAYHLACFACFSCKRQLSTGEEFGLVEEKVLCRIHYDTMIENLKRAAENGNGITLEGAVPSEQDSQPKPAKRARTSFTAEQLQVMQAQFAQDNNPDAQTLQKLADMTGLSRRVIQVWFQNCRARHKKHTPQHTVPPSGAPPSRIPSSLSDDIHYSPFSSPERARMVTLHGYIESQVQCGQVHCRLPYTAPPVHLKADMEGPLSNRGEKVILFQY
SIO_010081: LHX6
subclass of: SO_0000673
so part of: LHX6
location: join(1632298..1632360,1632658..1632840,1632917..1633038,1638226..1638446,1640655..1640755,1640846..1640941,1642076..1642250,1642764..1642867,1644540..1644560)
location: region:1632298-1644560:1
so has part: feature:1632298-1632360:1:exon
so has part: feature:1632658-1632840:1:exon
so has part: feature:1632917-1633038:1:exon
so has part: feature:1638226-1638446:1:exon
so has part: feature:1640655-1640755:1:exon
so has part: feature:1640846-1640941:1:exon
so has part: feature:1642076-1642250:1:exon
so has part: feature:1642764-1642867:1:exon
so has part: feature:1644540-1644560:1:exon

XP_030817389.1
type: Protein
SIO_000068: ncbiprotein

position:1632298:1
position: 1632298
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1632298-1632360:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1632658-1632840:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1632917-1633038:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1638226-1638446:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1640655-1640755:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1640846-1640941:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1642076-1642250:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1642764-1642867:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1644540-1644560:1:exon

LHX6
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 87175
gene: LHX6
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: LIM/homeobox protein Lhx6 isoform X4
translation: MPPEPLPKGSARCLDPHSRAMSQSDGEPLPGALEKEDARSAPSTPSTPSVCSPPSSSSSTPSAGKNVCSSCGLEILDRYLLKVNNLIWHVRCLECSVCRTSLRQQHSCYIKNKEIFCKMDYFSRFGTKCARCGRQIYASDWVRRARGNAYHLACFACFSCKRQLSTGEEFGLVEEKVLCRIHYDTMIENLKRAAENGNGITLEGAVPSEQDSQPKPAKRARTSFTAEQLQVMQAQFAQDNNPDAQTLQKLADMTGLSRRVIQVWFQNCRARHKKHTPQHTVPPSGAPPSRIPSSLSDDIHYSPFSSPERARMVTLHGYIESQVQCGQVHCRLPYTAPPVHLKADMEGPLSNRGEKVILFQY
SIO_010081: LHX6
subclass of: SO_0000673
so part of: LHX6
location: join(1632298..1632360,1632658..1632840,1632917..1633038,1638226..1638446,1640655..1640755,1640846..1640941,1642076..1642250,1642764..1642867,1644540..1644560)
location: region:1632298-1644560:1
so has part: feature:1632298-1632360:1:exon
so has part: feature:1632658-1632840:1:exon
so has part: feature:1632917-1633038:1:exon
so has part: feature:1638226-1638446:1:exon
so has part: feature:1640655-1640755:1:exon
so has part: feature:1640846-1640941:1:exon
so has part: feature:1642076-1642250:1:exon
so has part: feature:1642764-1642867:1:exon
so has part: feature:1644540-1644560:1:exon

XP_030817390.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1632298-1632360:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1632658-1632840:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1632917-1633038:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1638226-1638446:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1640655-1640755:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1640846-1640941:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1642076-1642250:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1642764-1642867:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1644540-1644560:1:exon

MORN5
type: Gene
subclass of: SO_0000704
RO_0002162: 87175
gene: MORN5
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1647388..1661865)
location: region:1647388-1661865:-1
so has part: feature:1647388-1661865:-1:exon
subclass of: SO_0000010

115910946
type: Gene
SIO_000068: ncbigene