Camarhynchus parvulus chromosome 13, STF_HiC, whole genome shotgun sequence.
type: Entry
definition: Camarhynchus parvulus chromosome 13, STF_HiC, whole genome shotgun sequence.
sequence version: NC_044583.1
sequence date: 2019-09-26
sequence: sequence
division: CON
label: NC_044583.1
type: RefSeq
SIO_000068: refseq
dblink: PRJNA566393
dblink: SAMEA5603054
keyword: WGS
keyword: RefSeq
source: Camarhynchus parvulus
organism: Camarhynchus parvulus
taxonomy: Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Passeriformes; Thraupidae; Camarhynchus.
comment: REFSEQ INFORMATION: The reference sequence is identical to\nLR595710.1.\nAssembly name: STF_HiC\nThe genomic sequence for this RefSeq record is from the\nwhole-genome assembly released by the UPPSALA UNIVERISTY on\n2019/09/06. The original whole-genome shotgun project has the\naccession CABFNF000000000.1.\n\n##Genome-Annotation-Data-START##\nAnnotation Provider :: NCBI\nAnnotation Status :: Full annotation\nAnnotation Name :: Camarhynchus parvulus Annotation\n Release 100\nAnnotation Version :: 100\nAnnotation Pipeline :: NCBI eukaryotic genome annotation\n pipeline\nAnnotation Software Version :: 8.2\nAnnotation Method :: Best-placed RefSeq; Gnomon\nFeatures Annotated :: Gene; mRNA; CDS; ncRNA\n##Genome-Annotation-Data-END##

sequence
subclass of: SO_0000340
sequence length: 18381638
topology: linear
so has quality: SO_0000987
location: 1..18381638
location: region:1-18381638:1
RO_0002162: 87175

NC_044583
type: RefSeq
SIO_000068: refseq

PRJNA566393
type: BioProject
SIO_000068: bioproject

SAMEA5603054
type: BioSample
SIO_000068: biosample

position:1:1
position: 1
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:18381638:1
position: 18381638
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

feature:1-18381638:1:source
so part of: sequence
organism: Camarhynchus parvulus
mol type: genomic DNA
chromosome: 13

87175
type: Taxonomy
SIO_000068: taxonomy

LOC115908813
type: Gene
subclass of: SO_0000704
RO_0002162: 87175
gene: LOC115908813
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(22061..46861)
location: region:22061-46861:-1
so has part: feature:22061-46861:-1:exon
subclass of: SO_0000010

115908813
type: Gene
SIO_000068: ncbigene

position:22061:-1
position: 22061
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:46861:-1
position: 46861
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:22061-46861:-1:exon

LOC115908813
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 87175
gene: LOC115908813
product: uncharacterized LOC115908813
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 85% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_030957676.1
SIO_010081: LOC115908813
subclass of: SO_0000673
so part of: LOC115908813
location: complement(join(22061..23194,33969..34042,35629..35990,45565..45651,46694..46861))
location: region:22061-46861:-1
so has part: feature:46694-46861:-1:exon
so has part: feature:45565-45651:-1:exon
so has part: feature:35629-35990:-1:exon
so has part: feature:33969-34042:-1:exon
so has part: feature:22061-23194:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:46694-46861:-1:exon

position:46694:-1
position: 46694
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:45565-45651:-1:exon

position:45565:-1
position: 45565
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:45651:-1
position: 45651
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:35629-35990:-1:exon

position:35629:-1
position: 35629
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:35990:-1
position: 35990
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:33969-34042:-1:exon

position:33969:-1
position: 33969
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:34042:-1
position: 34042
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:22061-23194:-1:exon

position:23194:-1
position: 23194
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC115908813
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 87175
gene: LOC115908813
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: uncharacterized protein LOC115908813
translation: MDDFLITAPPKTEMEPTCTGIVTEIQDVRLDISTTKTQGCDINSSKKTSSSLYSGQVLELSGFLPKTSNHITPQNVLTSPEPRKQPVFPGGCSGAGWGKGGQRPRGQWPPAGSAETKPATDRSRLQQREPASRWGWDRQDRRTGIPSGADRAGRWIAPTWPMASGSAETKPVLAPAEGVNRVRTARDGTEGDRRDPIPPFLVQSARIKSRPRMLCLASGVNRKDPNPLLE
SIO_010081: LOC115908813
subclass of: SO_0000673
so part of: LOC115908813
location: complement(join(23193..23194,33969..34042,35629..35990,45565..45651,46694..46861))
location: region:23193-46861:-1
so has part: feature:46694-46861:-1:exon
so has part: feature:45565-45651:-1:exon
so has part: feature:35629-35990:-1:exon
so has part: feature:33969-34042:-1:exon
so has part: feature:23193-23194:-1:exon

XP_030813536.1
type: Protein
SIO_000068: ncbiprotein

position:23193:-1
position: 23193
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:46694-46861:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:45565-45651:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:35629-35990:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:33969-34042:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:23193-23194:-1:exon

LOC115908725
type: Gene
subclass of: SO_0000704
RO_0002162: 87175
gene: LOC115908725
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(72187..81613)
location: region:72187-81613:-1
so has part: feature:72187-81613:-1:exon
subclass of: SO_0000010

115908725
type: Gene
SIO_000068: ncbigene

position:72187:-1
position: 72187
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:81613:-1
position: 81613
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:72187-81613:-1:exon

LOC115908725
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 87175
gene: LOC115908725
product: putative calcium-activated potassium channel subunit beta
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 7 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_030957531.1
SIO_010081: LOC115908725
subclass of: SO_0000673
so part of: LOC115908725
location: complement(join(72187..72782,74286..74481,75901..76066,81534..81613))
location: region:72187-81613:-1
so has part: feature:81534-81613:-1:exon
so has part: feature:75901-76066:-1:exon
so has part: feature:74286-74481:-1:exon
so has part: feature:72187-72782:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:81534-81613:-1:exon

position:81534:-1
position: 81534
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:75901-76066:-1:exon

position:75901:-1
position: 75901
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:76066:-1
position: 76066
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:74286-74481:-1:exon

position:74286:-1
position: 74286
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:74481:-1
position: 74481
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:72187-72782:-1:exon

position:72782:-1
position: 72782
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC115908725
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 87175
gene: LOC115908725
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: putative calcium-activated potassium channel subunit beta
translation: MLGKKLVTAQKRGETRALCLGLGMVACSMMMYFFIGITIVPFYTKSVWTTETVCKVLKANIKDKVFCPNRKGSEDEEIFPYPCLQVWVNLTASGQEVMLYQTEDTLERNPKCSYVPDKLENSKEVKARIETIASNFKKYQTFPCYYDPGGTQTNVILSRLYPAKGLLFAFLWPTLMFTGGCLIIVLVKISQYVSVLSAWQ
SIO_010081: LOC115908725
subclass of: SO_0000673
so part of: LOC115908725
location: complement(join(72513..72782,74286..74481,75901..76037))
location: region:72513-76037:-1
so has part: feature:75901-76037:-1:exon
so has part: feature:74286-74481:-1:exon
so has part: feature:72513-72782:-1:exon

XP_030813391.1
type: Protein
SIO_000068: ncbiprotein

position:72513:-1
position: 72513
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:76037:-1
position: 76037
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:75901-76037:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:74286-74481:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:72513-72782:-1:exon

LOC115908724
type: Gene
subclass of: SO_0000704
RO_0002162: 87175
gene: LOC115908724
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 303010..337533
location: region:303010-337533:1
so has part: feature:303010-337533:1:exon
subclass of: SO_0000010

115908724
type: Gene
SIO_000068: ncbigene

position:303010:1
position: 303010
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:337533:1
position: 337533
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:303010-337533:1:exon

LOC115908724
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 87175
gene: LOC115908724
product: Kv channel-interacting protein 1-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 3 ESTs, 49 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_030957529.1
SIO_010081: LOC115908724
subclass of: SO_0000673
so part of: LOC115908724
location: join(303010..303119,323847..323971,330071..330140,331584..331654,333291..333398,334326..334430,334998..335060,337260..337533)
location: region:303010-337533:1
so has part: feature:303010-303119:1:exon
so has part: feature:323847-323971:1:exon
so has part: feature:330071-330140:1:exon
so has part: feature:331584-331654:1:exon
so has part: feature:333291-333398:1:exon
so has part: feature:334326-334430:1:exon
so has part: feature:334998-335060:1:exon
so has part: feature:337260-337533:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:303010-303119:1:exon

position:303119:1
position: 303119
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:323847-323971:1:exon

position:323847:1
position: 323847
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:323971:1
position: 323971
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:330071-330140:1:exon

position:330071:1
position: 330071
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:330140:1
position: 330140
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:331584-331654:1:exon

position:331584:1
position: 331584
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:331654:1
position: 331654
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:333291-333398:1:exon

position:333291:1
position: 333291
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:333398:1
position: 333398
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:334326-334430:1:exon

position:334326:1
position: 334326
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:334430:1
position: 334430
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:334998-335060:1:exon

position:334998:1
position: 334998
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:335060:1
position: 335060
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:337260-337533:1:exon

position:337260:1
position: 337260
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC115908724
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 87175
gene: LOC115908724
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: Kv channel-interacting protein 1-like
translation: MWTKGESEGLQTLGIVVVVCSSLKLLHYLGLIDLSDDKIEDELEMTTVCHRPEGLEQLEAQTNFTKRELQVLYRGFKNECPSGVVNEETFKQIYAQFFPHGDASMYAHYLFNAFDTAQNGSVKFEDFVMALSILLRGTVHEKLRWTFNLYDINKDGYINKEEMMDIVKAIYDMMGKYTYPVLKEDAPRQHVEVFFQKMDKNKDGVVTLDEFIESCQEDDNIMRSLQLFENVM
SIO_010081: LOC115908724
subclass of: SO_0000673
so part of: LOC115908724
location: join(303011..303119,323847..323971,330071..330140,331584..331654,333291..333398,334326..334430,334998..335060,337260..337307)
location: region:303011-337307:1
so has part: feature:303011-303119:1:exon
so has part: feature:323847-323971:1:exon
so has part: feature:330071-330140:1:exon
so has part: feature:331584-331654:1:exon
so has part: feature:333291-333398:1:exon
so has part: feature:334326-334430:1:exon
so has part: feature:334998-335060:1:exon
so has part: feature:337260-337307:1:exon

XP_030813389.1
type: Protein
SIO_000068: ncbiprotein

position:303011:1
position: 303011
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:337307:1
position: 337307
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:303011-303119:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:323847-323971:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:330071-330140:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:331584-331654:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:333291-333398:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:334326-334430:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:334998-335060:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:337260-337307:1:exon

GABRP
type: Gene
subclass of: SO_0000704
RO_0002162: 87175
gene: GABRP
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 355059..367842
location: region:355059-367842:1
so has part: feature:355059-367842:1:exon
subclass of: SO_0000010

115908713
type: Gene
SIO_000068: ncbigene

position:355059:1
position: 355059
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:367842:1
position: 367842
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:355059-367842:1:exon

GABRP
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 87175
gene: GABRP
product: gamma-aminobutyric acid type A receptor pi subunit
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 11 Proteins, and 9% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_030957512.1
SIO_010081: GABRP
subclass of: SO_0000673
so part of: GABRP
location: join(355059..355120,356454..356560,359299..359366,360965..361182,362007..362089,364401..364538,365761..365913,366442..366635,367528..367842)
location: region:355059-367842:1
so has part: feature:355059-355120:1:exon
so has part: feature:356454-356560:1:exon
so has part: feature:359299-359366:1:exon
so has part: feature:360965-361182:1:exon
so has part: feature:362007-362089:1:exon
so has part: feature:364401-364538:1:exon
so has part: feature:365761-365913:1:exon
so has part: feature:366442-366635:1:exon
so has part: feature:367528-367842:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:355059-355120:1:exon

position:355120:1
position: 355120
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:356454-356560:1:exon

position:356454:1
position: 356454
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:356560:1
position: 356560
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:359299-359366:1:exon

position:359299:1
position: 359299
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:359366:1
position: 359366
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:360965-361182:1:exon

position:360965:1
position: 360965
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:361182:1
position: 361182
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:362007-362089:1:exon

position:362007:1
position: 362007
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:362089:1
position: 362089
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:364401-364538:1:exon

position:364401:1
position: 364401
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:364538:1
position: 364538
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:365761-365913:1:exon

position:365761:1
position: 365761
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:365913:1
position: 365913
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:366442-366635:1:exon

position:366442:1
position: 366442
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:366635:1
position: 366635
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:367528-367842:1:exon

position:367528:1
position: 367528
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

GABRP
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 87175
gene: GABRP
note: The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: substituted 1 base at 1 genomic stop codon; Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
transl except: (pos:355116..355118,aa:OTHER)
product: LOW QUALITY PROTEIN: gamma-aminobutyric acid receptor subunit pi
translation: MFCRYFSFFGLCLFLPTQRXVSLGHGSSLHGRGTASLPGFENLTMGYNKYLRPYFGGEPVQIAMSLDIASISSISESDMDYTATISLRQRWTDPRLVFHGNKSFTLDARLVELLWVPDTYIVESKRSFLHDVTVGNRLVRLFSNGTVLYALRITTTVACNMDLSKYPMDTQTCRLQLESWGYDENDVTFTWLRGNNSVHGMEKLRLSQYTVERYHTLVSKSQQETGSYPRLILQFELRRNVLYFILETYVPSTLLVMLSWVSFWITLDSVPARTCIGVTTVLSMTTLMIGSRSSLSKTNCFIKAIDVYLGICFSFIFGALVEYAVAHYSSSQKCAAKVPEEGPANELTEEMEEVNITNILKNSITSYKQKISFTSIEISSDNVNCSDLTMKNHEKIKCALRNKMHRIIGYFTIQNPGNVDHYSKLLFPLFFMVVNVFYWAYYLYF
SIO_010081: GABRP
subclass of: SO_0000673
so part of: GABRP
location: join(355059..355120,356454..356560,359299..359366,360965..361182,362007..362089,364401..364538,365761..365913,366442..366635,367528..367842)
location: region:355059-367842:1
so has part: feature:355059-355120:1:exon
so has part: feature:356454-356560:1:exon
so has part: feature:359299-359366:1:exon
so has part: feature:360965-361182:1:exon
so has part: feature:362007-362089:1:exon
so has part: feature:364401-364538:1:exon
so has part: feature:365761-365913:1:exon
so has part: feature:366442-366635:1:exon
so has part: feature:367528-367842:1:exon

XP_030813372.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:355059-355120:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:356454-356560:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:359299-359366:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:360965-361182:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:362007-362089:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:364401-364538:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:365761-365913:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:366442-366635:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:367528-367842:1:exon

LOC115908712
type: Gene
subclass of: SO_0000704
RO_0002162: 87175
gene: LOC115908712
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 376663..385852
location: region:376663-385852:1
so has part: feature:376663-385852:1:exon
subclass of: SO_0000010

115908712
type: Gene
SIO_000068: ncbigene

position:376663:1
position: 376663
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:385852:1
position: 385852
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:376663-385852:1:exon

LOC115908712
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 87175
gene: LOC115908712
product: kazal-type serine protease inhibitor domain-containing protein 1-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 mRNAs, 1 EST, 8 Proteins, and 59% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_030957511.1
SIO_010081: LOC115908712
subclass of: SO_0000673
so part of: LOC115908712
location: join(376663..377332,383378..383538,384224..384368,385707..385852)
location: region:376663-385852:1
so has part: feature:376663-377332:1:exon
so has part: feature:383378-383538:1:exon
so has part: feature:384224-384368:1:exon
so has part: feature:385707-385852:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:376663-377332:1:exon

position:377332:1
position: 377332
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:383378-383538:1:exon

position:383378:1
position: 383378
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:383538:1
position: 383538
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:384224-384368:1:exon

position:384224:1
position: 384224
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:384368:1
position: 384368
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:385707-385852:1:exon

position:385707:1
position: 385707
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC115908712
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 87175
gene: LOC115908712
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: kazal-type serine protease inhibitor domain-containing protein 1-like
translation: MKHRMVTAVLVALVQVSQSFPALYHRGWWRLLREGDSCGKCDLALCSEPKDCPAGAVLDRCGCCPECGNVEGQICDLDQGNHFYGQCGDHLECRLDADEARFGEVPEPQCVCKSQESICGSDGKTYENICQFNKAYAAKRNISVKHKGPCESAPVISMPPQDAQNYTGNDVIFGCEVSAYPMPQLEWKKKGNKMFLPGDDSHVSVQARGGPQKYGVTGWLQIQGLKKSDEGIYICHTKNKHGATYASARLKVIDGPSPAFAFTAGSRSASYSVEYEEYYDTSDEEDDEEYESGNYDNENNSE
SIO_010081: LOC115908712
subclass of: SO_0000673
so part of: LOC115908712
location: join(376876..377332,383378..383538,384224..384368,385707..385852)
location: region:376876-385852:1
so has part: feature:376876-377332:1:exon
so has part: feature:383378-383538:1:exon
so has part: feature:384224-384368:1:exon
so has part: feature:385707-385852:1:exon

XP_030813371.1
type: Protein
SIO_000068: ncbiprotein

position:376876:1
position: 376876
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:376876-377332:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:383378-383538:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:384224-384368:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:385707-385852:1:exon

LOC115908814
type: Gene
subclass of: SO_0000704
RO_0002162: 87175
gene: LOC115908814
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(484085..506132)
location: region:484085-506132:-1
so has part: feature:484085-506132:-1:exon
subclass of: SO_0000010

115908814
type: Gene
SIO_000068: ncbigene

position:484085:-1
position: 484085
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:506132:-1
position: 506132
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:484085-506132:-1:exon

LOC115908814
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 87175
gene: LOC115908814
product: spidroin-2-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein
transcript id: XM_030957677.1
SIO_010081: LOC115908814
subclass of: SO_0000673
so part of: LOC115908814
location: complement(join(484085..484548,504757..505030,506007..506132))
location: region:484085-506132:-1
so has part: feature:506007-506132:-1:exon
so has part: feature:504757-505030:-1:exon
so has part: feature:484085-484548:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:506007-506132:-1:exon

position:506007:-1
position: 506007
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:504757-505030:-1:exon

position:504757:-1
position: 504757
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:505030:-1
position: 505030
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:484085-484548:-1:exon

position:484548:-1
position: 484548
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC115908814
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 87175
gene: LOC115908814
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: spidroin-2-like
translation: MPPAAPGGPNRIVPARCDGQRSRHQPPLPGAELIRLRRSRKLVQRSLAPCRPSLRPRSGSAARPARALLRAPAAAGPACGALLLRPWERPPEPATLPPIGEPEPALGWLQRAHRGRGTPGQAQGTSSQAASQGGPCRAGPGRAGQFAVPDSSGPCRAGPGSAVPGSSGPCRAVPGRAGPGRAVPCRAGPRAVPCRAVPWAGPGRADRLPPAGPRAGQGGARGRRRCLPGEWAPRPGSRPGPARYGTGQTGGAAGPERGRVVVRLPPEPHGSPEPRLGTVQGARQRRR
SIO_010081: LOC115908814
subclass of: SO_0000673
so part of: LOC115908814
location: complement(join(484085..484548,504757..505030,506007..506132))
location: region:484085-506132:-1
so has part: feature:506007-506132:-1:exon
so has part: feature:504757-505030:-1:exon
so has part: feature:484085-484548:-1:exon

XP_030813537.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:506007-506132:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:504757-505030:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:484085-484548:-1:exon

TLX3
type: Gene
subclass of: SO_0000704
RO_0002162: 87175
gene: TLX3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 507291..509934
location: region:507291-509934:1
so has part: feature:507291-509934:1:exon
subclass of: SO_0000010

115908714
type: Gene
SIO_000068: ncbigene

position:507291:1
position: 507291
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:509934:1
position: 509934
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:507291-509934:1:exon

TLX3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 87175
gene: TLX3
product: T cell leukemia homeobox 3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, 13 Proteins, and 96% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_030957513.1
SIO_010081: TLX3
subclass of: SO_0000673
so part of: TLX3
location: join(507291..507766,508151..508394,508978..509934)
location: region:507291-509934:1
so has part: feature:507291-507766:1:exon
so has part: feature:508151-508394:1:exon
so has part: feature:508978-509934:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:507291-507766:1:exon

position:507766:1
position: 507766
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:508151-508394:1:exon

position:508151:1
position: 508151
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:508394:1
position: 508394
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:508978-509934:1:exon

position:508978:1
position: 508978
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

TLX3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 87175
gene: TLX3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: T-cell leukemia homeobox protein 3
translation: MDPPRMDPPGPAQGQHQHEPISFGIDQILNSPEQDSAPPPPPRGPDGATFLGGPGGRGGAPYPALPAPFPAIAAPFEDSGSYSVNLSLAPAGVIRVPAHRPIPGAVPPPISSAIPAMPAVPSLGSLNFPWMESSRRFVKDRFTAAAALTPFTVTRRIGHPYQNRTPPKRKKPRTSFSRVQICELEKRFHRQKYLASAERAALAKSLKMTDAQVKTWFQNRRTKWRRQTAEEREAERQQASRLMLQLQHDAFQKSLNESIQPDPLCLHNSSLFALQNLQPWEEESAKIPPVTSLV
SIO_010081: TLX3
subclass of: SO_0000673
so part of: TLX3
location: join(507337..507766,508151..508394,508978..509188)
location: region:507337-509188:1
so has part: feature:507337-507766:1:exon
so has part: feature:508151-508394:1:exon
so has part: feature:508978-509188:1:exon

XP_030813373.1
type: Protein
SIO_000068: ncbiprotein

position:507337:1
position: 507337
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:509188:1
position: 509188
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:507337-507766:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:508151-508394:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:508978-509188:1:exon

NPM1
type: Gene
subclass of: SO_0000704
RO_0002162: 87175
gene: NPM1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 543509..555517
location: region:543509-555517:1
so has part: feature:543509-555517:1:exon
subclass of: SO_0000010

115908675
type: Gene
SIO_000068: ncbigene

position:543509:1
position: 543509
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:555517:1
position: 555517
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:543509-555517:1:exon

NPM1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 87175
gene: NPM1
product: nucleophosmin 1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 13 ESTs, 12 Proteins, and 97% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_030957451.1
SIO_010081: NPM1
subclass of: SO_0000673
so part of: NPM1
location: join(543509..543643,544340..544419,547179..547298,548066..548159,548887..548987,549454..549515,549959..550013,551001..551090,551978..552079,554123..554197,555169..555517)
location: region:543509-555517:1
so has part: feature:543509-543643:1:exon
so has part: feature:544340-544419:1:exon
so has part: feature:547179-547298:1:exon
so has part: feature:548066-548159:1:exon
so has part: feature:548887-548987:1:exon
so has part: feature:549454-549515:1:exon
so has part: feature:549959-550013:1:exon
so has part: feature:551001-551090:1:exon
so has part: feature:551978-552079:1:exon
so has part: feature:554123-554197:1:exon
so has part: feature:555169-555517:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:543509-543643:1:exon

position:543643:1
position: 543643
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:544340-544419:1:exon

position:544340:1
position: 544340
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:544419:1
position: 544419
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:547179-547298:1:exon

position:547179:1
position: 547179
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:547298:1
position: 547298
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:548066-548159:1:exon

position:548066:1
position: 548066
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:548159:1
position: 548159
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:548887-548987:1:exon

position:548887:1
position: 548887
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:548987:1
position: 548987
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:549454-549515:1:exon

position:549454:1
position: 549454
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:549515:1
position: 549515
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:549959-550013:1:exon

position:549959:1
position: 549959
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:550013:1
position: 550013
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:551001-551090:1:exon

position:551001:1
position: 551001
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:551090:1
position: 551090
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:551978-552079:1:exon

position:551978:1
position: 551978
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:552079:1
position: 552079
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:554123-554197:1:exon

position:554123:1
position: 554123
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:554197:1
position: 554197
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:555169-555517:1:exon

position:555169:1
position: 555169
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

NPM1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 87175
gene: NPM1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: nucleophosmin
translation: MEDSAMDMESMGPLRPQTFLFGCELKADKEFQFKVDDEENEHQLSLRTVTLGAGAKDELHIVEAEALDYEGNPTKVVLASLKMSVQPTVSLGGFEITPPVVLRLKCGSGPVYVSGQHLVALEEEPESDEEEDDAKIVNASTKRPASGGAKPPQKKPKLAEDDEDDDEDEDDDDDDEDDLEDDEEEIKAPIKKPVREAAGKNMQKAKQNGKDSKPSTPASKSKTPDSKKDKTLTPKTPKVPLSLEEIKAKMQASVDKGTTLPKLEPKFANYVKNCFRTEDQKVIQALWQWRQTL
SIO_010081: NPM1
subclass of: SO_0000673
so part of: NPM1
location: join(543580..543643,544340..544419,547179..547298,548066..548159,548887..548987,549454..549515,549959..550013,551001..551090,551978..552079,554123..554197,555169..555207)
location: region:543580-555207:1
so has part: feature:543580-543643:1:exon
so has part: feature:544340-544419:1:exon
so has part: feature:547179-547298:1:exon
so has part: feature:548066-548159:1:exon
so has part: feature:548887-548987:1:exon
so has part: feature:549454-549515:1:exon
so has part: feature:549959-550013:1:exon
so has part: feature:551001-551090:1:exon
so has part: feature:551978-552079:1:exon
so has part: feature:554123-554197:1:exon
so has part: feature:555169-555207:1:exon

XP_030813311.1
type: Protein
SIO_000068: ncbiprotein

position:543580:1
position: 543580
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:555207:1
position: 555207
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:543580-543643:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:544340-544419:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:547179-547298:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:548066-548159:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:548887-548987:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:549454-549515:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:549959-550013:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:551001-551090:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:551978-552079:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:554123-554197:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:555169-555207:1:exon

FGF18
type: Gene
subclass of: SO_0000704
RO_0002162: 87175
gene: FGF18
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 565204..652878
location: region:565204-652878:1
so has part: feature:565204-652878:1:exon
subclass of: SO_0000010

115908607
type: Gene
SIO_000068: ncbigene

position:565204:1
position: 565204
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:652878:1
position: 652878
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:565204-652878:1:exon

FGF18
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 87175
gene: FGF18
product: fibroblast growth factor 18, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 mRNAs, 1 EST, 26 Proteins, and 93% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_030957337.1
SIO_010081: FGF18
subclass of: SO_0000673
so part of: FGF18
location: join(565204..565293,565767..566038,566309..566345,588258..588438,613365..613471,628632..629634)
location: region:565204-629634:1
so has part: feature:565204-565293:1:exon
so has part: feature:565767-566038:1:exon
so has part: feature:566309-566345:1:exon
so has part: feature:588258-588438:1:exon
so has part: feature:613365-613471:1:exon
so has part: feature:628632-629634:1:exon

position:629634:1
position: 629634
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:565204-565293:1:exon

position:565293:1
position: 565293
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:565767-566038:1:exon

position:565767:1
position: 565767
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:566038:1
position: 566038
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:566309-566345:1:exon

position:566309:1
position: 566309
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:566345:1
position: 566345
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:588258-588438:1:exon

position:588258:1
position: 588258
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:588438:1
position: 588438
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:613365-613471:1:exon

position:613365:1
position: 613365
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:613471:1
position: 613471
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:628632-629634:1:exon

position:628632:1
position: 628632
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

FGF18
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 87175
gene: FGF18
product: fibroblast growth factor 18, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_030957338.1
SIO_010081: FGF18
subclass of: SO_0000673
so part of: FGF18
location: join(565760..566038,566309..566345,588258..588438,613365..613471,652622..652878)
location: region:565760-652878:1
so has part: feature:565760-566038:1:exon
so has part: feature:566309-566345:1:exon
so has part: feature:588258-588438:1:exon
so has part: feature:613365-613471:1:exon
so has part: feature:652622-652878:1:exon

position:565760:1
position: 565760
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:565760-566038:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:566309-566345:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:588258-588438:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:613365-613471:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:652622-652878:1:exon

position:652622:1
position: 652622
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

FGF18
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 87175
gene: FGF18
product: fibroblast growth factor 18, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 mRNAs, 1 EST, 26 Proteins, and 93% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XM_030957336.1
SIO_010081: FGF18
subclass of: SO_0000673
so part of: FGF18
location: join(565760..566038,566309..566345,588258..588438,613365..613471,628632..629634)
location: region:565760-629634:1
so has part: feature:565760-566038:1:exon
so has part: feature:566309-566345:1:exon
so has part: feature:588258-588438:1:exon
so has part: feature:613365-613471:1:exon
so has part: feature:628632-629634:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:565760-566038:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:566309-566345:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:588258-588438:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:613365-613471:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:628632-629634:1:exon

FGF18
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 87175
gene: FGF18
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: fibroblast growth factor 18 isoform X2
translation: MYSLLSACTCLCLHFLLLCFQVQMFAAEENVDFRIHVENQTRARDDVSRKQLRLYQLYSRTSGKHIQVLGRRISAKGEDGDKYAQLLVETDTFGSQVRIKGKETDFYLCMNRKGKLVGKVTVTPWCHSLHGHPSSASCPARLSPNTQQGAAASETGLRQMADELQQSLGTFRKNGASLSQECCSGRGEWPNLTQI
SIO_010081: FGF18
subclass of: SO_0000673
so part of: FGF18
location: join(566007..566038,566309..566345,588258..588438,613365..613471,652622..652852)
location: region:566007-652852:1
so has part: feature:566007-566038:1:exon
so has part: feature:566309-566345:1:exon
so has part: feature:588258-588438:1:exon
so has part: feature:613365-613471:1:exon
so has part: feature:652622-652852:1:exon

XP_030813198.1
type: Protein
SIO_000068: ncbiprotein

position:566007:1
position: 566007
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:652852:1
position: 652852
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:566007-566038:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:566309-566345:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:588258-588438:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:613365-613471:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:652622-652852:1:exon

FGF18
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 87175
gene: FGF18
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: fibroblast growth factor 18 isoform X1
translation: MYSLLSACTCLCLHFLLLCFQVQMFAAEENVDFRIHVENQTRARDDVSRKQLRLYQLYSRTSGKHIQVLGRRISAKGEDGDKYAQLLVETDTFGSQVRIKGKETDFYLCMNRKGKLVGKPDGTSKECVFIEKVLENNYTALMSAKYSGWYVGFTKKGRPRKGPKTRENQQDVHFMKRYPKGQMEIQKPFKYTTVTKRTKRIRPTNPS
SIO_010081: FGF18
subclass of: SO_0000673
so part of: FGF18
location: join(566007..566038,566309..566345,588258..588438,613365..613471,628632..628898)
location: region:566007-628898:1
so has part: feature:566007-566038:1:exon
so has part: feature:566309-566345:1:exon
so has part: feature:588258-588438:1:exon
so has part: feature:613365-613471:1:exon
so has part: feature:628632-628898:1:exon

XP_030813196.1
type: Protein
SIO_000068: ncbiprotein

position:628898:1
position: 628898
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:566007-566038:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:566309-566345:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:588258-588438:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:613365-613471:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:628632-628898:1:exon

FGF18
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 87175
gene: FGF18
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: fibroblast growth factor 18 isoform X1
translation: MYSLLSACTCLCLHFLLLCFQVQMFAAEENVDFRIHVENQTRARDDVSRKQLRLYQLYSRTSGKHIQVLGRRISAKGEDGDKYAQLLVETDTFGSQVRIKGKETDFYLCMNRKGKLVGKPDGTSKECVFIEKVLENNYTALMSAKYSGWYVGFTKKGRPRKGPKTRENQQDVHFMKRYPKGQMEIQKPFKYTTVTKRTKRIRPTNPS
SIO_010081: FGF18
subclass of: SO_0000673
so part of: FGF18
location: join(566007..566038,566309..566345,588258..588438,613365..613471,628632..628898)
location: region:566007-628898:1
so has part: feature:566007-566038:1:exon
so has part: feature:566309-566345:1:exon
so has part: feature:588258-588438:1:exon
so has part: feature:613365-613471:1:exon
so has part: feature:628632-628898:1:exon

XP_030813197.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:566007-566038:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:566309-566345:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:588258-588438:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:613365-613471:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:628632-628898:1:exon

LOC115908543
type: Gene
subclass of: SO_0000704
RO_0002162: 87175
gene: LOC115908543
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(861973..919315)
location: region:861973-919315:-1
so has part: feature:861973-919315:-1:exon
subclass of: SO_0000010

115908543
type: Gene
SIO_000068: ncbigene

position:861973:-1
position: 861973
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:919315:-1
position: 919315
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:861973-919315:-1:exon

LOC115908543
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 87175
gene: LOC115908543
product: F-box/WD repeat-containing protein 11-like
exception: unclassified transcription discrepancy
note: The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: deleted 2 bases in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 22 ESTs, 7 Proteins, and 98% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
transcript id: XM_030957198.1
SIO_010081: LOC115908543
subclass of: SO_0000673
so part of: LOC115908543
location: complement(join(861973..864286,867221..867409,868856..868934,869455..869565,870084..870204,871193..871442,871979..872097,872632..872769,879909..879999,881232..881418,884654..884879,885895..885957,919215..919315))
location: region:861973-919315:-1
so has part: feature:919215-919315:-1:exon
so has part: feature:885895-885957:-1:exon
so has part: feature:884654-884879:-1:exon
so has part: feature:881232-881418:-1:exon
so has part: feature:879909-879999:-1:exon
so has part: feature:872632-872769:-1:exon
so has part: feature:871979-872097:-1:exon
so has part: feature:871193-871442:-1:exon
so has part: feature:870084-870204:-1:exon
so has part: feature:869455-869565:-1:exon
so has part: feature:868856-868934:-1:exon
so has part: feature:867221-867409:-1:exon
so has part: feature:861973-864286:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:919215-919315:-1:exon

position:919215:-1
position: 919215
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:885895-885957:-1:exon

position:885895:-1
position: 885895
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:885957:-1
position: 885957
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:884654-884879:-1:exon

position:884654:-1
position: 884654
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:884879:-1
position: 884879
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:881232-881418:-1:exon

position:881232:-1
position: 881232
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:881418:-1
position: 881418
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:879909-879999:-1:exon

position:879909:-1
position: 879909
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:879999:-1
position: 879999
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:872632-872769:-1:exon

position:872632:-1
position: 872632
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:872769:-1
position: 872769
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:871979-872097:-1:exon

position:871979:-1
position: 871979
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:872097:-1
position: 872097
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:871193-871442:-1:exon

position:871193:-1
position: 871193
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:871442:-1
position: 871442
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:870084-870204:-1:exon

position:870084:-1
position: 870084
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:870204:-1
position: 870204
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:869455-869565:-1:exon

position:869455:-1
position: 869455
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:869565:-1
position: 869565
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:868856-868934:-1:exon

position:868856:-1
position: 868856
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:868934:-1
position: 868934
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:867221-867409:-1:exon

position:867221:-1
position: 867221
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:867409:-1
position: 867409
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:861973-864286:-1:exon

position:864286:-1
position: 864286
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC115908543
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 87175
gene: LOC115908543
exception: unclassified translation discrepancy
note: The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: deleted 2 bases in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: LOW QUALITY PROTEIN: F-box/WD repeat-containing protein 11-like
translation: MEPDSVIEDKTIELMNTSVMEDQNEDESPKKNTLWQISNGTSSVIVSRKRPSEGNYEKEKDLCIKYFDQWSESDQVEFVEHLISRMCHYQHGHINSYLKPMLQRDFITALPEQGLDHIAENILSYLDARSLCAAELVCKEWQRVISEGMLWKKLIERMVRTDPLWKGLSERRGWDQYLFKNRPTDGPPNSFYRSLYPKIIQDIETIESNWRCGRHNLQRIQCRSENSKGVYCLQYDDEKIISGLRDNSIKIWDKTSLECLKVLTGHTGSVLCLQYDERVIVTGSSDSTVRVWDVNTGEVLNTLIHHNEAVLHLRFSNGLMVTCSKDRSIAVWDMASPTDITLRRVLVGHRAAVNVVDFDDKYIVSASGDRTIKVWSTSTCEFVRTLNGHKRGIACLQYRDRLVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRFDNKRIVSGAYDGKIKVWDLQAALDPRAPASTLCLRTLVEHSGRVFRLQFDEFQIISSSHDDTILIWDFLNVPPSAQNETRSPSRTYTYISR
SIO_010081: LOC115908543
subclass of: SO_0000673
so part of: LOC115908543
location: complement(join(867248..867409,868856..868934,869455..869565,870084..870204,871193..871442,871979..872097,872632..872769,879909..879999,881232..881418,884654..884879,885895..885957,919215..919259))
location: region:867248-919259:-1
so has part: feature:919215-919259:-1:exon
so has part: feature:885895-885957:-1:exon
so has part: feature:884654-884879:-1:exon
so has part: feature:881232-881418:-1:exon
so has part: feature:879909-879999:-1:exon
so has part: feature:872632-872769:-1:exon
so has part: feature:871979-872097:-1:exon
so has part: feature:871193-871442:-1:exon
so has part: feature:870084-870204:-1:exon
so has part: feature:869455-869565:-1:exon
so has part: feature:868856-868934:-1:exon
so has part: feature:867248-867409:-1:exon

XP_030813058.1
type: Protein
SIO_000068: ncbiprotein

position:867248:-1
position: 867248
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:919259:-1
position: 919259
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:919215-919259:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:885895-885957:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:884654-884879:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:881232-881418:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:879909-879999:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:872632-872769:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:871979-872097:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:871193-871442:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:870084-870204:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:869455-869565:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:868856-868934:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:867248-867409:-1:exon

ETF1
type: Gene
subclass of: SO_0000704
RO_0002162: 87175
gene: ETF1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(927040..953150)
location: region:927040-953150:-1
so has part: feature:927040-953150:-1:exon
subclass of: SO_0000010

115908499
type: Gene
SIO_000068: ncbigene

position:927040:-1
position: 927040
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:953150:-1
position: 953150
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:927040-953150:-1:exon

ETF1
type: Miscellaneous RNA
subclass of: SO_0000673
RO_0002162: 87175
gene: ETF1
product: eukaryotic translation termination factor 1, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 mRNAs, 38 ESTs, 13 Proteins, and 98% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XR_004061120.1
SIO_010081: ETF1
so part of: ETF1
location: complement(join(927040..927860,927909..929181,930465..930612,931725..931789,932313..932468,932829..932958,933413..933603,934480..934618,937775..937914,938676..938851,952845..953150))
location: region:927040-953150:-1
so has part: feature:952845-953150:-1:exon
so has part: feature:938676-938851:-1:exon
so has part: feature:937775-937914:-1:exon
so has part: feature:934480-934618:-1:exon
so has part: feature:933413-933603:-1:exon
so has part: feature:932829-932958:-1:exon
so has part: feature:932313-932468:-1:exon
so has part: feature:931725-931789:-1:exon
so has part: feature:930465-930612:-1:exon
so has part: feature:927909-929181:-1:exon
so has part: feature:927040-927860:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:952845-953150:-1:exon

position:952845:-1
position: 952845
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:938676-938851:-1:exon

position:938676:-1
position: 938676
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:938851:-1
position: 938851
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:937775-937914:-1:exon

position:937775:-1
position: 937775
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:937914:-1
position: 937914
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:934480-934618:-1:exon

position:934480:-1
position: 934480
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:934618:-1
position: 934618
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:933413-933603:-1:exon

position:933413:-1
position: 933413
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:933603:-1
position: 933603
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:932829-932958:-1:exon

position:932829:-1
position: 932829
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:932958:-1
position: 932958
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:932313-932468:-1:exon

position:932313:-1
position: 932313
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:932468:-1
position: 932468
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:931725-931789:-1:exon

position:931725:-1
position: 931725
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:931789:-1
position: 931789
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:930465-930612:-1:exon

position:930465:-1
position: 930465
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:930612:-1
position: 930612
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:927909-929181:-1:exon

position:927909:-1
position: 927909
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:929181:-1
position: 929181
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:927040-927860:-1:exon

position:927860:-1
position: 927860
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

ETF1
type: Miscellaneous RNA
subclass of: SO_0000673
RO_0002162: 87175
gene: ETF1
product: eukaryotic translation termination factor 1, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 mRNAs, 38 ESTs, 13 Proteins, and 98% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
transcript id: XR_004061121.1
SIO_010081: ETF1
so part of: ETF1
location: complement(join(927040..927764,927813..929181,930465..930612,931725..931789,932313..932468,932829..932958,933413..933603,934480..934618,937775..937914,938676..938851,952845..953150))
location: region:927040-953150:-1
so has part: feature:952845-953150:-1:exon
so has part: feature:938676-938851:-1:exon
so has part: feature:937775-937914:-1:exon
so has part: feature:934480-934618:-1:exon
so has part: feature:933413-933603:-1:exon
so has part: feature:932829-932958:-1:exon
so has part: feature:932313-932468:-1:exon
so has part: feature:931725-931789:-1:exon
so has part: feature:930465-930612:-1:exon
so has part: feature:927813-929181:-1:exon
so has part: feature:927040-927764:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:952845-953150:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:938676-938851:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:937775-937914:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:934480-934618:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:933413-933603:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:932829-932958:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:932313-932468:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:931725-931789:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:930465-930612:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:927813-929181:-1:exon

position:927813:-1
position: 927813
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:927040-927764:-1:exon

position:927764:-1
position: 927764
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

ETF1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 87175
gene: ETF1
product: eukaryotic translation termination factor 1, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 mRNAs, 38 ESTs, 13 Proteins, and 98% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
transcript id: XM_030957124.1
SIO_010081: ETF1
subclass of: SO_0000673
so part of: ETF1
location: complement(join(927040..929181,930465..930612,931725..931789,932313..932468,932829..932958,933413..933603,934480..934618,937775..937914,938676..938851,952845..953150))
location: region:927040-953150:-1
so has part: feature:952845-953150:-1:exon
so has part: feature:938676-938851:-1:exon
so has part: feature:937775-937914:-1:exon
so has part: feature:934480-934618:-1:exon
so has part: feature:933413-933603:-1:exon
so has part: feature:932829-932958:-1:exon
so has part: feature:932313-932468:-1:exon
so has part: feature:931725-931789:-1:exon
so has part: feature:930465-930612:-1:exon
so has part: feature:927040-929181:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:952845-953150:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:938676-938851:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:937775-937914:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:934480-934618:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:933413-933603:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:932829-932958:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:932313-932468:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:931725-931789:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:930465-930612:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:927040-929181:-1:exon

ETF1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 87175
gene: ETF1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: eukaryotic peptide chain release factor subunit 1
translation: MADDPSAADRNVEIWKIKKLIKSLEAARGNGTSMISLIIPPKDQISRVAKMLADEFGTASNIKSRVNRLSVLGAITSVQQRLKLYNKVPPNGLVVYCGTIVTEEGKEKKVNIDFEPFKPINTSLYLCDNKFHTEALTALLSDDSKFGFIVIDGSGALFGTLQGNTREVLHKFTVDLPKKHGRGGQSALRFARLRMEKRHNYVRKVAETAVQLFISGDKVNVAGLVLAGSADFKTELSQSDMFDQRLQSKVLKLVDISYGGENGFNQAIELSTEVLSNVKFIQEKKLIGRYFDEISQDTGKYCFGVEDTLKALEMGAVEILIVYENLDIMRYVLHCQGTEEEKILYLTPEQEKDKSHFTDKETGQEHELIESMPLLEWFANNYKKFGATLEIVTDKSQEGSQFVKGFGGIGGILRYRVDFQGMEYQGGDDEFFDLDDY
SIO_010081: ETF1
subclass of: SO_0000673
so part of: ETF1
location: complement(join(929099..929181,930465..930612,931725..931789,932313..932468,932829..932958,933413..933603,934480..934618,937775..937914,938676..938851,952845..952930))
location: region:929099-952930:-1
so has part: feature:952845-952930:-1:exon
so has part: feature:938676-938851:-1:exon
so has part: feature:937775-937914:-1:exon
so has part: feature:934480-934618:-1:exon
so has part: feature:933413-933603:-1:exon
so has part: feature:932829-932958:-1:exon
so has part: feature:932313-932468:-1:exon
so has part: feature:931725-931789:-1:exon
so has part: feature:930465-930612:-1:exon
so has part: feature:929099-929181:-1:exon

XP_030812984.1
type: Protein
SIO_000068: ncbiprotein

position:929099:-1
position: 929099
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:952930:-1
position: 952930
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:952845-952930:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:938676-938851:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:937775-937914:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:934480-934618:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:933413-933603:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:932829-932958:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:932313-932468:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:931725-931789:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:930465-930612:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:929099-929181:-1:exon

HSPA9
type: Gene
subclass of: SO_0000704
RO_0002162: 87175
gene: HSPA9
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(954333..976710)
location: region:954333-976710:-1
so has part: feature:954333-976710:-1:exon
subclass of: SO_0000010

115908500
type: Gene
SIO_000068: ncbigene

position:954333:-1
position: 954333
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:976710:-1
position: 976710
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:954333-976710:-1:exon

HSPA9
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 87175
gene: HSPA9
product: heat shock protein family A (Hsp70) member 9
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 54 ESTs, 34 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
transcript id: XM_030957125.1
SIO_010081: HSPA9
subclass of: SO_0000673
so part of: HSPA9
location: complement(join(954333..955108,955898..956038,957842..957934,959531..959625,961892..962009,963139..963243,964030..964257,966506..966715,968326..968418,969048..969210,970009..970115,970201..970274,971986..972110,972778..972959,973048..973135,974661..974719,976320..976710))
location: region:954333-976710:-1
so has part: feature:976320-976710:-1:exon
so has part: feature:974661-974719:-1:exon
so has part: feature:973048-973135:-1:exon
so has part: feature:972778-972959:-1:exon
so has part: feature:971986-972110:-1:exon
so has part: feature:970201-970274:-1:exon
so has part: feature:970009-970115:-1:exon
so has part: feature:969048-969210:-1:exon
so has part: feature:968326-968418:-1:exon
so has part: feature:966506-966715:-1:exon
so has part: feature:964030-964257:-1:exon
so has part: feature:963139-963243:-1:exon
so has part: feature:961892-962009:-1:exon
so has part: feature:959531-959625:-1:exon
so has part: feature:957842-957934:-1:exon
so has part: feature:955898-956038:-1:exon
so has part: feature:954333-955108:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:976320-976710:-1:exon

position:976320:-1
position: 976320
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:974661-974719:-1:exon

position:974661:-1
position: 974661
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:974719:-1
position: 974719
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:973048-973135:-1:exon

position:973048:-1
position: 973048
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:973135:-1
position: 973135
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:972778-972959:-1:exon

position:972778:-1
position: 972778
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:972959:-1
position: 972959
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:971986-972110:-1:exon

position:971986:-1
position: 971986
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:972110:-1
position: 972110
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:970201-970274:-1:exon

position:970201:-1
position: 970201
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:970274:-1
position: 970274
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:970009-970115:-1:exon

position:970009:-1
position: 970009
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:970115:-1
position: 970115
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:969048-969210:-1:exon

position:969048:-1
position: 969048
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:969210:-1
position: 969210
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:968326-968418:-1:exon

position:968326:-1
position: 968326
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:968418:-1
position: 968418
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:966506-966715:-1:exon

position:966506:-1
position: 966506
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:966715:-1
position: 966715
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:964030-964257:-1:exon

position:964030:-1
position: 964030
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:964257:-1
position: 964257
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:963139-963243:-1:exon

position:963139:-1
position: 963139
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:963243:-1
position: 963243
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:961892-962009:-1:exon

position:961892:-1
position: 961892
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:962009:-1
position: 962009
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:959531-959625:-1:exon

position:959531:-1
position: 959531
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:959625:-1
position: 959625
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:957842-957934:-1:exon

position:957842:-1
position: 957842
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:957934:-1
position: 957934
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:955898-956038:-1:exon

position:955898:-1
position: 955898
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:956038:-1
position: 956038
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:954333-955108:-1:exon

position:955108:-1
position: 955108
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

HSPA9
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 87175
gene: HSPA9
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: stress-70 protein, mitochondrial
translation: MLSASRLPLLLPRAAPAPPARPAQTFWNGLSQNVLRAASSRKYASEAIKGAVIGIDLGTTNSCVAVMEGKQAKVLENSEGARTTPSVVAFTAEGERLVGMPAKRQAVTNPHNTFYATKRLIGRRFDDAEVKKDIKNVPFKIVRASNGDAWVEAHGKLYSPSQIGAFVLMKMKETAENYLGHAAKNAVITVPAYFNDSQRQATKDAGQIAGLNVLRVINEPTAAALAYGLDKSEDKVIAVYDLGGGTFDISVLEIQKGVFEVKSTNGDTFLGGEDFDQALLQHIVKEFKRETGVDLTKDNMALQRVREASEKAKCELSSSVQTDINLPYLTMDASGPKHLNMKLSRAQFEGIVADLIKRTVAPCQKAMQDAEVSKSDIGEVILVGGMTRMPKVQQTVQDLFGRAPSKAVNPDEAVAIGAAIQGGVLAGDVTDVLLLDVTPLSLGIETLGGVFTKLINRNTTIPTKKSQVFSTAADGQTQVEIKVCQGEREMASDNKLLGQFTLVGIPPAPRGVPQIEVTFDIDANGIVHVSAKDKGTGREQQIVIQSSGGLSKDEIENMVKNAEKYAEEDRRRKERVEAVNMAEGIIHDTESKMEEFKDQLPADECNKLKEEIAKMRELLARKDSETGENIRQAATSLQQASLKLFEMAYKKMASEREGSGSAGDQKEEKQ
SIO_010081: HSPA9
subclass of: SO_0000673
so part of: HSPA9
location: complement(join(955049..955108,955898..956038,957842..957934,959531..959625,961892..962009,963139..963243,964030..964257,966506..966715,968326..968418,969048..969210,970009..970115,970201..970274,971986..972110,972778..972959,973048..973135,974661..974719,976320..976391))
location: region:955049-976391:-1
so has part: feature:976320-976391:-1:exon
so has part: feature:974661-974719:-1:exon
so has part: feature:973048-973135:-1:exon
so has part: feature:972778-972959:-1:exon
so has part: feature:971986-972110:-1:exon
so has part: feature:970201-970274:-1:exon
so has part: feature:970009-970115:-1:exon
so has part: feature:969048-969210:-1:exon
so has part: feature:968326-968418:-1:exon
so has part: feature:966506-966715:-1:exon
so has part: feature:964030-964257:-1:exon
so has part: feature:963139-963243:-1:exon
so has part: feature:961892-962009:-1:exon
so has part: feature:959531-959625:-1:exon
so has part: feature:957842-957934:-1:exon
so has part: feature:955898-956038:-1:exon
so has part: feature:955049-955108:-1:exon

XP_030812985.1
type: Protein
SIO_000068: ncbiprotein

position:955049:-1
position: 955049
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:976391:-1
position: 976391
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:976320-976391:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:974661-974719:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:973048-973135:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:972778-972959:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:971986-972110:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:970201-970274:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:970009-970115:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:969048-969210:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:968326-968418:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:966506-966715:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:964030-964257:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:963139-963243:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:961892-962009:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:959531-959625:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:957842-957934:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:955898-956038:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:955049-955108:-1:exon

LOC115908897
type: Gene
subclass of: SO_0000704
RO_0002162: 87175
gene: LOC115908897
note: Derived by automated computational analysis using gene prediction method: cmsearch.
so part of: sequence
location: complement(962588..962656)
location: region:962588-962656:-1
so has part: feature:962588-962656:-1:exon
subclass of: SO_0000578

115908897
type: Gene
SIO_000068: ncbigene

position:962588:-1
position: 962588
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:962656:-1
position: 962656
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:962588-962656:-1:exon

LOC115908897
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 87175
nc RNA class: snoRNA
gene: LOC115908897
product: small nucleolar RNA SNORD63
inference: COORDINATES: nucleotide motif:Rfam:12.0:RF00154
inference: COORDINATES: profile:INFERNAL:1.1.1
note: Derived by automated computational analysis using gene prediction method: cmsearch.
transcript id: XR_004061131.1
SIO_010081: LOC115908897
subclass of: SO_0000673
so part of: LOC115908897
location: complement(962588..962656)
location: region:962588-962656:-1
so has part: feature:962588-962656:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:962588-962656:-1:exon

LOC115908896
type: Gene
subclass of: SO_0000704
RO_0002162: 87175
gene: LOC115908896
note: Derived by automated computational analysis using gene prediction method: cmsearch.
so part of: sequence
location: complement(963709..963780)
location: region:963709-963780:-1
so has part: feature:963709-963780:-1:exon
subclass of: SO_0000578

115908896
type: Gene
SIO_000068: ncbigene

position:963709:-1
position: 963709
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:963780:-1
position: 963780
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:963709-963780:-1:exon

LOC115908896
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 87175
nc RNA class: snoRNA
gene: LOC115908896
product: small nucleolar RNA SNORD63
inference: COORDINATES: nucleotide motif:Rfam:12.0:RF00154
inference: COORDINATES: profile:INFERNAL:1.1.1
note: Derived by automated computational analysis using gene prediction method: cmsearch.
transcript id: XR_004061130.1
SIO_010081: LOC115908896
subclass of: SO_0000673
so part of: LOC115908896
location: complement(963709..963780)
location: region:963709-963780:-1
so has part: feature:963709-963780:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:963709-963780:-1:exon

CTNNA1
type: Gene
subclass of: SO_0000704
RO_0002162: 87175
gene: CTNNA1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1104026..1220709
location: region:1104026-1220709:1
so has part: feature:1104026-1220709:1:exon
subclass of: SO_0000010

115908893
type: Gene
SIO_000068: ncbigene

position:1104026:1
position: 1104026
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1220709:1
position: 1220709
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1104026-1220709:1:exon

CTNNA1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 87175
gene: CTNNA1
product: catenin alpha 1
exception: unclassified transcription discrepancy
note: The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: inserted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 31 ESTs, 31 Proteins, and 95% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
transcript id: XM_030957794.1
SIO_010081: CTNNA1
subclass of: SO_0000673
so part of: CTNNA1
location: join(1104026..1104144,1120740..1120846,1122702..1122897,1129538..1129704,1130507..1130626,1132420..1132686,1135705..1135908,1172966..1173046,1173809..1173961,1189867..1189959,1200506..1200662,1205777..1205977,1207029..1207179,1209800..1209910,1211376..1211557,1212295..1212400,1217542..1217676,1220115..1220709)
location: region:1104026-1220709:1
so has part: feature:1104026-1104144:1:exon
so has part: feature:1120740-1120846:1:exon
so has part: feature:1122702-1122897:1:exon
so has part: feature:1129538-1129704:1:exon
so has part: feature:1130507-1130626:1:exon
so has part: feature:1132420-1132686:1:exon
so has part: feature:1135705-1135908:1:exon
so has part: feature:1172966-1173046:1:exon
so has part: feature:1173809-1173961:1:exon
so has part: feature:1189867-1189959:1:exon
so has part: feature:1200506-1200662:1:exon
so has part: feature:1205777-1205977:1:exon
so has part: feature:1207029-1207179:1:exon
so has part: feature:1209800-1209910:1:exon
so has part: feature:1211376-1211557:1:exon
so has part: feature:1212295-1212400:1:exon
so has part: feature:1217542-1217676:1:exon
so has part: feature:1220115-1220709:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1104026-1104144:1:exon

position:1104144:1
position: 1104144
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1120740-1120846:1:exon

position:1120740:1
position: 1120740
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1120846:1
position: 1120846
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1122702-1122897:1:exon

position:1122702:1
position: 1122702
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1122897:1
position: 1122897
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1129538-1129704:1:exon

position:1129538:1
position: 1129538
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1129704:1
position: 1129704
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1130507-1130626:1:exon

position:1130507:1
position: 1130507
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1130626:1
position: 1130626
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1132420-1132686:1:exon

position:1132420:1
position: 1132420
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1132686:1
position: 1132686
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1135705-1135908:1:exon

position:1135705:1
position: 1135705
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1135908:1
position: 1135908
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1172966-1173046:1:exon

position:1172966:1
position: 1172966
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1173046:1
position: 1173046
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:1173809-1173961:1:exon

position:1173809:1
position: 1173809
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1173961:1
position: 1173961
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:1189867-1189959:1:exon

position:1189867:1
position: 1189867
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1189959:1
position: 1189959
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:1200506-1200662:1:exon

position:1200506:1
position: 1200506
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1200662:1
position: 1200662
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:1205777-1205977:1:exon

position:1205777:1
position: 1205777
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1205977:1
position: 1205977
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:1207029-1207179:1:exon

position:1207029:1
position: 1207029
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1207179:1
position: 1207179
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:1209800-1209910:1:exon

position:1209800:1
position: 1209800
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1209910:1
position: 1209910
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:1211376-1211557:1:exon

position:1211376:1
position: 1211376
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1211557:1
position: 1211557
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:1212295-1212400:1:exon

position:1212295:1
position: 1212295
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1212400:1
position: 1212400
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:1217542-1217676:1:exon

position:1217542:1
position: 1217542
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1217676:1
position: 1217676
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:1220115-1220709:1:exon

position:1220115:1
position: 1220115
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

CTNNA1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 87175
gene: CTNNA1
exception: unclassified translation discrepancy
note: The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: inserted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: LOW QUALITY PROTEIN: catenin alpha-1
translation: MTAVTAANVNFKWDPKSLEIRTLAVERLLEPLVTQVTTLVNTSNKGPSNKKRGRSKKAHVLAASVEQATENFLEKGDKIAKESQFLKEELVAAVEDVRKQGDLMKSASGEFADDPCSSVKRGNMVRAARALLSAVTRLLILADMADVYKLLVQLKVVEDGILKLRNAGTEQDLGIQYKALKPEVDKLNIMAAKRQQELKDVGHRDQMAAARGILQKNVPILYTASQACLQHPDVAAYKANRDLIYKQLQQAVSGISNAAQATASDDAAQQQGGGGELAYALNNFDKQIIVDPSTFSEERFRPSLEERLESIISGAALMADSSCTRDDRRERIVAECNAVRQALQDLLSAYMGNAGRKERSDALNSAIDKMTKKTRDLRRQLRKAVMDHVSDSFLETNVPLLVLIEAAKNGNEKEVKEYAQVFREHANKLIEVANLACSISNNEEGVKLVRMSASQLEALCPQVINAALALAAKPQSKLAQENMDLFKEQWERQVRVLTDAVDDITSIDDFLAVSENHILEDVNKCVIALQEKDVDGLDRTAGAIRGRAARVIHVVTSEMDNYEPGVYTEKVLEATKLLSNTVMPRFTEQVEAAVEALSXDPAQPMDENEFIDASRLVYDGIRDIRKAVLMIRTPEELDDSDFETEDFDVRSRTSIQTEDDQLIAGQSARAIMAQLPQEQKAKIAEQVASFQEEKSKLDAEVSKWDDSGNDIIVLAKQMCMIMMEMTDFTRGKGPLKNTSDVISAAKKIAEAGSRMDKLGRTIADHCPDSACKQDLLAYLQRIALYCHQLNICSKVKAEVQNLGGELVVSGVDSAMSLIQAAKNLMNAVVQTVKASYVASTKYQKSQGMASLNLPAVSWKMKAPEKKPLVKREKQDETQTKIKRASQKKHVNPVQALSEFKAMESI
SIO_010081: CTNNA1
subclass of: SO_0000673
so part of: CTNNA1
location: join(1120742..1120846,1122702..1122897,1129538..1129704,1130507..1130626,1132420..1132686,1135705..1135908,1172966..1173046,1173809..1173961,1189867..1189959,1200506..1200662,1205777..1205977,1207029..1207179,1209800..1209910,1211376..1211557,1212295..1212400,1217542..1217676,1220115..1220402)
location: region:1120742-1220402:1
so has part: feature:1120742-1120846:1:exon
so has part: feature:1122702-1122897:1:exon
so has part: feature:1129538-1129704:1:exon
so has part: feature:1130507-1130626:1:exon
so has part: feature:1132420-1132686:1:exon
so has part: feature:1135705-1135908:1:exon
so has part: feature:1172966-1173046:1:exon
so has part: feature:1173809-1173961:1:exon
so has part: feature:1189867-1189959:1:exon
so has part: feature:1200506-1200662:1:exon
so has part: feature:1205777-1205977:1:exon
so has part: feature:1207029-1207179:1:exon
so has part: feature:1209800-1209910:1:exon
so has part: feature:1211376-1211557:1:exon
so has part: feature:1212295-1212400:1:exon
so has part: feature:1217542-1217676:1:exon
so has part: feature:1220115-1220402:1:exon

XP_030813654.1
type: Protein
SIO_000068: ncbiprotein

position:1120742:1
position: 1120742
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1220402:1
position: 1220402
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1120742-1120846:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1122702-1122897:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1129538-1129704:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1130507-1130626:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1132420-1132686:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1135705-1135908:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1172966-1173046:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1173809-1173961:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1189867-1189959:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1200506-1200662:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1205777-1205977:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1207029-1207179:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1209800-1209910:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1211376-1211557:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1212295-1212400:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1217542-1217676:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1220115-1220402:1:exon

LRRTM2
type: Gene
subclass of: SO_0000704
RO_0002162: 87175
gene: LRRTM2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1162801..1165654)
location: region:1162801-1165654:-1
so has part: feature:1162801-1165654:-1:exon
subclass of: SO_0000010

115908894
type: Gene
SIO_000068: ncbigene

position:1162801:-1
position: 1162801
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1165654:-1
position: 1165654
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1162801-1165654:-1:exon

LRRTM2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 87175
gene: LRRTM2
product: leucine rich repeat transmembrane neuronal 2, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 ESTs, 1 Protein, and 99% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_030957796.1
SIO_010081: LRRTM2
subclass of: SO_0000673
so part of: LRRTM2
location: complement(join(1162801..1164479,1165243..1165654))
location: region:1162801-1165654:-1
so has part: feature:1165243-1165654:-1:exon
so has part: feature:1162801-1164479:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1165243-1165654:-1:exon

position:1165243:-1
position: 1165243
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1162801-1164479:-1:exon

position:1164479:-1
position: 1164479
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LRRTM2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 87175
gene: LRRTM2
product: leucine rich repeat transmembrane neuronal 2, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 ESTs, 21 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_030957795.1
SIO_010081: LRRTM2
subclass of: SO_0000673
so part of: LRRTM2
location: complement(join(1162801..1164907,1165243..1165654))
location: region:1162801-1165654:-1
so has part: feature:1165243-1165654:-1:exon
so has part: feature:1162801-1164907:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1165243-1165654:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1162801-1164907:-1:exon

position:1164907:-1
position: 1164907
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LRRTM2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 87175
gene: LRRTM2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: leucine-rich repeat transmembrane neuronal protein 2 isoform X2
translation: MHPPMYSKEWLSSLHPELFYGLRKLQTLHLRSNSLRTIPVRLFWDCRSLEFLDLSTNRLRSLARNGFAGLIKLRELHLEHNQLTKINFAHFLRLSSLHTLFLQWNKISNLTCGMEWTWGTLAKLDLTGNEIKAIDLTVFETMPNLKTLLMDNNKLTTLDSKILSSLTSLTTVGLSGNLWECSPKICALATWLSGFQGRWEHAILCHSPDHTQGEDILDAVYGFQLCWNLSTVVTPVATTSYTAPTTEYMKRISSSHFHVGDKEIPTTAGMVVTTEEQFPEPNNAIFTQRVITGTMALLFSFFFIIFIVFISRKCCPPTLRRIRQCSMIQNHRQLRSQTRLHMANMSDQGPYNEYEPTHEGPFIIINGYGQCKCQQLPYKECEV
SIO_010081: LRRTM2
subclass of: SO_0000673
so part of: LRRTM2
location: complement(join(1163358..1164479,1165243..1165272))
location: region:1163358-1165272:-1
so has part: feature:1165243-1165272:-1:exon
so has part: feature:1163358-1164479:-1:exon

XP_030813656.1
type: Protein
SIO_000068: ncbiprotein

position:1163358:-1
position: 1163358
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1165272:-1
position: 1165272
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1165243-1165272:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1163358-1164479:-1:exon

LRRTM2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 87175
gene: LRRTM2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: leucine-rich repeat transmembrane neuronal protein 2 isoform X1
translation: MGLHFKWPLGARMLAALYAMSMVLKMLPALGMACPPKCRCEKLLFYCDSQGFHSVPNTTEKGSLGLSLRHNYISELERDQFASFSQLTWLHLDHNQIATVREDSFQGLYKLKELVLSSNKIFHLPNTTFSQLLNLQNLDLSFNQLSSLHPELFYGLRKLQTLHLRSNSLRTIPVRLFWDCRSLEFLDLSTNRLRSLARNGFAGLIKLRELHLEHNQLTKINFAHFLRLSSLHTLFLQWNKISNLTCGMEWTWGTLAKLDLTGNEIKAIDLTVFETMPNLKTLLMDNNKLTTLDSKILSSLTSLTTVGLSGNLWECSPKICALATWLSGFQGRWEHAILCHSPDHTQGEDILDAVYGFQLCWNLSTVVTPVATTSYTAPTTEYMKRISSSHFHVGDKEIPTTAGMVVTTEEQFPEPNNAIFTQRVITGTMALLFSFFFIIFIVFISRKCCPPTLRRIRQCSMIQNHRQLRSQTRLHMANMSDQGPYNEYEPTHEGPFIIINGYGQCKCQQLPYKECEV
SIO_010081: LRRTM2
subclass of: SO_0000673
so part of: LRRTM2
location: complement(join(1163358..1164907,1165243..1165246))
location: region:1163358-1165246:-1
so has part: feature:1165243-1165246:-1:exon
so has part: feature:1163358-1164907:-1:exon

XP_030813655.1
type: Protein
SIO_000068: ncbiprotein

position:1165246:-1
position: 1165246
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1165243-1165246:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1163358-1164907:-1:exon

SIL1
type: Gene
subclass of: SO_0000704
RO_0002162: 87175
gene: SIL1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1225771..1337175)
location: region:1225771-1337175:-1
so has part: feature:1225771-1337175:-1:exon
subclass of: SO_0000010

115908662
type: Gene
SIO_000068: ncbigene

position:1225771:-1
position: 1225771
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1337175:-1
position: 1337175
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1225771-1337175:-1:exon

SIL1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 87175
gene: SIL1
product: SIL1 nucleotide exchange factor
exception: unclassified transcription discrepancy
note: The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: inserted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 5 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_030957421.1
SIO_010081: SIL1
subclass of: SO_0000673
so part of: SIL1
location: complement(join(1225771..1226229,1227941..1228105,1230102..1230198,1257757..1257878,1262389..1262580,1264854..1264950,1287307..1287427,1312428..1312563,1314747..1314861,1337147..1337175))
location: region:1225771-1337175:-1
so has part: feature:1337147-1337175:-1:exon
so has part: feature:1314747-1314861:-1:exon
so has part: feature:1312428-1312563:-1:exon
so has part: feature:1287307-1287427:-1:exon
so has part: feature:1264854-1264950:-1:exon
so has part: feature:1262389-1262580:-1:exon
so has part: feature:1257757-1257878:-1:exon
so has part: feature:1230102-1230198:-1:exon
so has part: feature:1227941-1228105:-1:exon
so has part: feature:1225771-1226229:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1337147-1337175:-1:exon

position:1337147:-1
position: 1337147
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1314747-1314861:-1:exon

position:1314747:-1
position: 1314747
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1314861:-1
position: 1314861
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1312428-1312563:-1:exon

position:1312428:-1
position: 1312428
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1312563:-1
position: 1312563
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1287307-1287427:-1:exon

position:1287307:-1
position: 1287307
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1287427:-1
position: 1287427
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1264854-1264950:-1:exon

position:1264854:-1
position: 1264854
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1264950:-1
position: 1264950
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1262389-1262580:-1:exon

position:1262389:-1
position: 1262389
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1262580:-1
position: 1262580
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1257757-1257878:-1:exon

position:1257757:-1
position: 1257757
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1257878:-1
position: 1257878
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1230102-1230198:-1:exon

position:1230102:-1
position: 1230102
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1230198:-1
position: 1230198
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:1227941-1228105:-1:exon

position:1227941:-1
position: 1227941
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1228105:-1
position: 1228105
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:1225771-1226229:-1:exon

position:1226229:-1
position: 1226229
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

SIL1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 87175
gene: SIL1
exception: unclassified translation discrepancy
note: The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: inserted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: LOW QUALITY PROTEIN: nucleotide exchange factor SIL1
translation: MSPWAGLLSTTCRVSLLLLLGSVLFSCSSLGQRVPEFALTKIEESDIKDDSGKELGTEDDADPEDLEVFYPTDQWQTLRPGQAVPAGSHVRLNLQTGEREAKLPDRENRKSDTREDRKRKRLGKVDLDANSFTSEELKQALAKMKESEKAERKAREEEVRKKFRPIEQLKEEFEKLNMKIETDYEIMAKLISKFNSSASTLDEKVTALYDLEYYVHQVDNAKDFLSMGGLRLVIEGLNSSEASLKEHSAFVLGAALSSNPKVQIEAIEGGALQKLLVILATEQPLAVRKKALFALSSMLRHFPYAQQQFLKLGGLQVLRSLFRQKGMEPLHVRVVTLLYDLIMEKMLLEDSQHGEQMEEKIQQYQQVRLVPAVVEQGWCALVPNLLAMPEHDTREKVLKLVGVLVAFCREHYRGDXALGTTLSLLRSEYEELAAEEQREGDKDGYFRELLGSINTIIQELR
SIO_010081: SIL1
subclass of: SO_0000673
so part of: SIL1
location: complement(join(1225880..1226229,1227941..1228105,1230102..1230198,1257757..1257878,1262389..1262580,1264854..1264950,1287307..1287427,1312428..1312563,1314747..1314851))
location: region:1225880-1314851:-1
so has part: feature:1314747-1314851:-1:exon
so has part: feature:1312428-1312563:-1:exon
so has part: feature:1287307-1287427:-1:exon
so has part: feature:1264854-1264950:-1:exon
so has part: feature:1262389-1262580:-1:exon
so has part: feature:1257757-1257878:-1:exon
so has part: feature:1230102-1230198:-1:exon
so has part: feature:1227941-1228105:-1:exon
so has part: feature:1225880-1226229:-1:exon

XP_030813281.1
type: Protein
SIO_000068: ncbiprotein

position:1225880:-1
position: 1225880
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1314851:-1
position: 1314851
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1314747-1314851:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1312428-1312563:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1287307-1287427:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1264854-1264950:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1262389-1262580:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1257757-1257878:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1230102-1230198:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1227941-1228105:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1225880-1226229:-1:exon

LOC115908661
type: Gene
subclass of: SO_0000704
RO_0002162: 87175
gene: LOC115908661
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1349210..1350796
location: region:1349210-1350796:1
so has part: feature:1349210-1350796:1:exon
subclass of: SO_0000011

115908661
type: Gene
SIO_000068: ncbigene

position:1349210:1
position: 1349210
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1350796:1
position: 1350796
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1349210-1350796:1:exon

LOC115908661
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 87175
nc RNA class: lncRNA
gene: LOC115908661
product: uncharacterized LOC115908661
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
transcript id: XR_004061127.1
SIO_010081: LOC115908661
subclass of: SO_0000673
so part of: LOC115908661
location: join(1349210..1349410,1349722..1349920,1350499..1350796)
location: region:1349210-1350796:1
so has part: feature:1349210-1349410:1:exon
so has part: feature:1349722-1349920:1:exon
so has part: feature:1350499-1350796:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1349210-1349410:1:exon

position:1349410:1
position: 1349410
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1349722-1349920:1:exon

position:1349722:1
position: 1349722
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1349920:1
position: 1349920
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1350499-1350796:1:exon

position:1350499:1
position: 1350499
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC115908895
type: Gene
subclass of: SO_0000704
RO_0002162: 87175
gene: LOC115908895
note: Derived by automated computational analysis using gene prediction method: cmsearch.
so part of: sequence
location: 1350141..1350343
location: region:1350141-1350343:1
so has part: feature:1350141-1350343:1:exon
subclass of: SO_0000578

115908895
type: Gene
SIO_000068: ncbigene

position:1350141:1
position: 1350141
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1350343:1
position: 1350343
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1350141-1350343:1:exon

LOC115908895
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 87175
nc RNA class: snoRNA
gene: LOC115908895
product: small nucleolar RNA SNORA74
inference: COORDINATES: nucleotide motif:Rfam:12.0:RF00090
inference: COORDINATES: profile:INFERNAL:1.1.1
note: Derived by automated computational analysis using gene prediction method: cmsearch.
transcript id: XR_004061129.1
SIO_010081: LOC115908895
subclass of: SO_0000673
so part of: LOC115908895
location: 1350141..1350343
location: region:1350141-1350343:1
so has part: feature:1350141-1350343:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1350141-1350343:1:exon

MATR3
type: Gene
subclass of: SO_0000704
RO_0002162: 87175
gene: MATR3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1353256..1379302
location: region:1353256-1379302:1
so has part: feature:1353256-1379302:1:exon
subclass of: SO_0000010

115908496
type: Gene
SIO_000068: ncbigene

position:1353256:1
position: 1353256
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1379302:1
position: 1379302
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1353256-1379302:1:exon

MATR3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 87175
gene: MATR3
product: matrin 3, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 mRNAs, 76 ESTs, 5 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
transcript id: XM_030957114.1
SIO_010081: MATR3
subclass of: SO_0000673
so part of: MATR3
location: join(1353256..1353330,1361107..1362183,1366479..1366540,1367075..1367116,1367368..1367471,1368690..1368742,1369220..1369345,1369950..1370075,1370259..1370429,1371648..1371779,1372943..1372986,1373456..1373846,1375447..1375840,1376428..1376549,1378041..1379102)
location: region:1353256-1379102:1
so has part: feature:1353256-1353330:1:exon
so has part: feature:1361107-1362183:1:exon
so has part: feature:1366479-1366540:1:exon
so has part: feature:1367075-1367116:1:exon
so has part: feature:1367368-1367471:1:exon
so has part: feature:1368690-1368742:1:exon
so has part: feature:1369220-1369345:1:exon
so has part: feature:1369950-1370075:1:exon
so has part: feature:1370259-1370429:1:exon
so has part: feature:1371648-1371779:1:exon
so has part: feature:1372943-1372986:1:exon
so has part: feature:1373456-1373846:1:exon
so has part: feature:1375447-1375840:1:exon
so has part: feature:1376428-1376549:1:exon
so has part: feature:1378041-1379102:1:exon

position:1379102:1
position: 1379102
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1353256-1353330:1:exon

position:1353330:1
position: 1353330
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1361107-1362183:1:exon

position:1361107:1
position: 1361107
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1362183:1
position: 1362183
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1366479-1366540:1:exon

position:1366479:1
position: 1366479
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1366540:1
position: 1366540
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1367075-1367116:1:exon

position:1367075:1
position: 1367075
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1367116:1
position: 1367116
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1367368-1367471:1:exon

position:1367368:1
position: 1367368
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1367471:1
position: 1367471
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1368690-1368742:1:exon

position:1368690:1
position: 1368690
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1368742:1
position: 1368742
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1369220-1369345:1:exon

position:1369220:1
position: 1369220
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1369345:1
position: 1369345
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1369950-1370075:1:exon

position:1369950:1
position: 1369950
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1370075:1
position: 1370075
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:1370259-1370429:1:exon

position:1370259:1
position: 1370259
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1370429:1
position: 1370429
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:1371648-1371779:1:exon

position:1371648:1
position: 1371648
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1371779:1
position: 1371779
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:1372943-1372986:1:exon

position:1372943:1
position: 1372943
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1372986:1
position: 1372986
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:1373456-1373846:1:exon

position:1373456:1
position: 1373456
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1373846:1
position: 1373846
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:1375447-1375840:1:exon

position:1375447:1
position: 1375447
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1375840:1
position: 1375840
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:1376428-1376549:1:exon

position:1376428:1
position: 1376428
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1376549:1
position: 1376549
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:1378041-1379102:1:exon

position:1378041:1
position: 1378041
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

MATR3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 87175
gene: MATR3
product: matrin 3, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 61 ESTs, 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XM_030957116.1
SIO_010081: MATR3
subclass of: SO_0000673
so part of: MATR3
location: join(1353275..1353330,1366479..1366540,1367075..1367116,1367368..1367471,1368690..1368742,1369220..1369345,1369950..1370075,1370259..1370429,1371648..1371779,1372943..1372986,1373456..1373846,1375447..1375840,1376428..1376549,1378041..1379302)
location: region:1353275-1379302:1
so has part: feature:1353275-1353330:1:exon
so has part: feature:1366479-1366540:1:exon
so has part: feature:1367075-1367116:1:exon
so has part: feature:1367368-1367471:1:exon
so has part: feature:1368690-1368742:1:exon
so has part: feature:1369220-1369345:1:exon
so has part: feature:1369950-1370075:1:exon
so has part: feature:1370259-1370429:1:exon
so has part: feature:1371648-1371779:1:exon
so has part: feature:1372943-1372986:1:exon
so has part: feature:1373456-1373846:1:exon
so has part: feature:1375447-1375840:1:exon
so has part: feature:1376428-1376549:1:exon
so has part: feature:1378041-1379302:1:exon

position:1353275:1
position: 1353275
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1353275-1353330:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1366479-1366540:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1367075-1367116:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1367368-1367471:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1368690-1368742:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1369220-1369345:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1369950-1370075:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1370259-1370429:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1371648-1371779:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1372943-1372986:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1373456-1373846:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1375447-1375840:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1376428-1376549:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1378041-1379302:1:exon

MATR3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 87175
gene: MATR3
product: matrin 3, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 49 ESTs, 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XM_030957115.1
SIO_010081: MATR3
subclass of: SO_0000673
so part of: MATR3
location: join(1353390..1353694,1361107..1362183,1366479..1366540,1367075..1367116,1367368..1367471,1368690..1368742,1369220..1369345,1369950..1370075,1370259..1370429,1371648..1371779,1372943..1372986,1373456..1373846,1375447..1375840,1378041..1379302)
location: region:1353390-1379302:1
so has part: feature:1353390-1353694:1:exon
so has part: feature:1361107-1362183:1:exon
so has part: feature:1366479-1366540:1:exon
so has part: feature:1367075-1367116:1:exon
so has part: feature:1367368-1367471:1:exon
so has part: feature:1368690-1368742:1:exon
so has part: feature:1369220-1369345:1:exon
so has part: feature:1369950-1370075:1:exon
so has part: feature:1370259-1370429:1:exon
so has part: feature:1371648-1371779:1:exon
so has part: feature:1372943-1372986:1:exon
so has part: feature:1373456-1373846:1:exon
so has part: feature:1375447-1375840:1:exon
so has part: feature:1378041-1379302:1:exon

position:1353390:1
position: 1353390
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1353390-1353694:1:exon

position:1353694:1
position: 1353694
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1361107-1362183:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1366479-1366540:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1367075-1367116:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1367368-1367471:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1368690-1368742:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1369220-1369345:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1369950-1370075:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1370259-1370429:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1371648-1371779:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1372943-1372986:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1373456-1373846:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1375447-1375840:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1378041-1379302:1:exon

MATR3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 87175
gene: MATR3
product: matrin 3, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 mRNAs, 78 ESTs, 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
transcript id: XM_030957113.1
SIO_010081: MATR3
subclass of: SO_0000673
so part of: MATR3
location: join(1353391..1353694,1361107..1362183,1366479..1366540,1367075..1367116,1367368..1367471,1368690..1368742,1369220..1369345,1369950..1370075,1370259..1370429,1371648..1371779,1372943..1372986,1373456..1373846,1375447..1375840,1376428..1376549,1378041..1379302)
location: region:1353391-1379302:1
so has part: feature:1353391-1353694:1:exon
so has part: feature:1361107-1362183:1:exon
so has part: feature:1366479-1366540:1:exon
so has part: feature:1367075-1367116:1:exon
so has part: feature:1367368-1367471:1:exon
so has part: feature:1368690-1368742:1:exon
so has part: feature:1369220-1369345:1:exon
so has part: feature:1369950-1370075:1:exon
so has part: feature:1370259-1370429:1:exon
so has part: feature:1371648-1371779:1:exon
so has part: feature:1372943-1372986:1:exon
so has part: feature:1373456-1373846:1:exon
so has part: feature:1375447-1375840:1:exon
so has part: feature:1376428-1376549:1:exon
so has part: feature:1378041-1379302:1:exon

position:1353391:1
position: 1353391
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1353391-1353694:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1361107-1362183:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1366479-1366540:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1367075-1367116:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1367368-1367471:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1368690-1368742:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1369220-1369345:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1369950-1370075:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1370259-1370429:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1371648-1371779:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1372943-1372986:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1373456-1373846:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1375447-1375840:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1376428-1376549:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1378041-1379302:1:exon

MATR3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 87175
gene: MATR3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: matrin-3 isoform X1
translation: MSKSFQQSSLSRDSQGHGRDLSAGIGLLAAATQSLNMPASLGRMNQGTARLASLMNLGMSSSLNQQGSHSALSSGSTSSHNLQSIFNIGSRGPLPLSSQHRGDADQATNILASFGLSARDLDELSRYPEDKITPENLPQILLQLKRRRAEEGYGRDGRSSTREPPYRVPRDDWEEKRHFRRDSFDDRGPSLNPVVDYDHGSRSQESGYYDRMDYEDDRLRDGERCRDESFYGETSHNYHKFDSEYDRMGRGPGPERSLFEKKRGAPPNSNIEDFHGFLPKGYPHLCSICDMPVHSNKEWNHHINGATHSRRCQLLLEIYPEWNPDSDSGHGMGDPFMLQQSTNPAPGILGPPPPPFHLGGPPVGPRGAGNGNMQGPRHMQKGRVETSRVVHIMDFQRGKNLRYQLLQLVEPFGIITNHLILNKINEAFIEMSTTEDAQAAVEYYSTTPALVFGKPVRVHLSQKYKRIKKPEGKPDQKTEPPKPELGRVIHLSNLPHSGYSDNAVLKLAEPYGKIKNYILMRMKSQAFIEMETREDALAMVEHCANKALWFQGRCVKVDLSEKYKKLVLRIPNKGVELLKKDKTRKRTYSPDSKDSPSDKKSKTEPAQKPESGNTEEKVKEEKQEDAAEPSGAKSGEQTEQDEPSLLLESEDELLVDEEEAAALLESGSSAGEDADVANLADVATEEKKDTPDDATVKTEGNVAATPAAKKKLKKRYVGGFPRSMEGFVTLDEVGDEEDSDHQKLRKSGLAAKAAGKSEDSLAEIKVDKIEEPEQESETLENGTKSEENAKAENVEASDATTAQDTEKSAQENTDPQGEQETKSVLEKPLVPDEFRIGPYQPNIPVGVNYVVPKTGFYCKLCSLFYTNEDVAKKTHCSSLPHYQKLKKILDKMAEDFRQKKEG
SIO_010081: MATR3
subclass of: SO_0000673
so part of: MATR3
location: join(1361293..1362183,1366479..1366540,1367075..1367116,1367368..1367471,1368690..1368742,1369220..1369345,1369950..1370075,1370259..1370429,1371648..1371779,1372943..1372986,1373456..1373846,1375447..1375840,1376428..1376549,1378041..1378091)
location: region:1361293-1378091:1
so has part: feature:1361293-1362183:1:exon
so has part: feature:1366479-1366540:1:exon
so has part: feature:1367075-1367116:1:exon
so has part: feature:1367368-1367471:1:exon
so has part: feature:1368690-1368742:1:exon
so has part: feature:1369220-1369345:1:exon
so has part: feature:1369950-1370075:1:exon
so has part: feature:1370259-1370429:1:exon
so has part: feature:1371648-1371779:1:exon
so has part: feature:1372943-1372986:1:exon
so has part: feature:1373456-1373846:1:exon
so has part: feature:1375447-1375840:1:exon
so has part: feature:1376428-1376549:1:exon
so has part: feature:1378041-1378091:1:exon

XP_030812973.1
type: Protein
SIO_000068: ncbiprotein

position:1361293:1
position: 1361293
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1378091:1
position: 1378091
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1361293-1362183:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1366479-1366540:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1367075-1367116:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1367368-1367471:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1368690-1368742:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1369220-1369345:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1369950-1370075:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1370259-1370429:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1371648-1371779:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1372943-1372986:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1373456-1373846:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1375447-1375840:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1376428-1376549:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1378041-1378091:1:exon

MATR3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 87175
gene: MATR3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: matrin-3 isoform X1
translation: MSKSFQQSSLSRDSQGHGRDLSAGIGLLAAATQSLNMPASLGRMNQGTARLASLMNLGMSSSLNQQGSHSALSSGSTSSHNLQSIFNIGSRGPLPLSSQHRGDADQATNILASFGLSARDLDELSRYPEDKITPENLPQILLQLKRRRAEEGYGRDGRSSTREPPYRVPRDDWEEKRHFRRDSFDDRGPSLNPVVDYDHGSRSQESGYYDRMDYEDDRLRDGERCRDESFYGETSHNYHKFDSEYDRMGRGPGPERSLFEKKRGAPPNSNIEDFHGFLPKGYPHLCSICDMPVHSNKEWNHHINGATHSRRCQLLLEIYPEWNPDSDSGHGMGDPFMLQQSTNPAPGILGPPPPPFHLGGPPVGPRGAGNGNMQGPRHMQKGRVETSRVVHIMDFQRGKNLRYQLLQLVEPFGIITNHLILNKINEAFIEMSTTEDAQAAVEYYSTTPALVFGKPVRVHLSQKYKRIKKPEGKPDQKTEPPKPELGRVIHLSNLPHSGYSDNAVLKLAEPYGKIKNYILMRMKSQAFIEMETREDALAMVEHCANKALWFQGRCVKVDLSEKYKKLVLRIPNKGVELLKKDKTRKRTYSPDSKDSPSDKKSKTEPAQKPESGNTEEKVKEEKQEDAAEPSGAKSGEQTEQDEPSLLLESEDELLVDEEEAAALLESGSSAGEDADVANLADVATEEKKDTPDDATVKTEGNVAATPAAKKKLKKRYVGGFPRSMEGFVTLDEVGDEEDSDHQKLRKSGLAAKAAGKSEDSLAEIKVDKIEEPEQESETLENGTKSEENAKAENVEASDATTAQDTEKSAQENTDPQGEQETKSVLEKPLVPDEFRIGPYQPNIPVGVNYVVPKTGFYCKLCSLFYTNEDVAKKTHCSSLPHYQKLKKILDKMAEDFRQKKEG
SIO_010081: MATR3
subclass of: SO_0000673
so part of: MATR3
location: join(1361293..1362183,1366479..1366540,1367075..1367116,1367368..1367471,1368690..1368742,1369220..1369345,1369950..1370075,1370259..1370429,1371648..1371779,1372943..1372986,1373456..1373846,1375447..1375840,1376428..1376549,1378041..1378091)
location: region:1361293-1378091:1
so has part: feature:1361293-1362183:1:exon
so has part: feature:1366479-1366540:1:exon
so has part: feature:1367075-1367116:1:exon
so has part: feature:1367368-1367471:1:exon
so has part: feature:1368690-1368742:1:exon
so has part: feature:1369220-1369345:1:exon
so has part: feature:1369950-1370075:1:exon
so has part: feature:1370259-1370429:1:exon
so has part: feature:1371648-1371779:1:exon
so has part: feature:1372943-1372986:1:exon
so has part: feature:1373456-1373846:1:exon
so has part: feature:1375447-1375840:1:exon
so has part: feature:1376428-1376549:1:exon
so has part: feature:1378041-1378091:1:exon

XP_030812974.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1361293-1362183:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1366479-1366540:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1367075-1367116:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1367368-1367471:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1368690-1368742:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1369220-1369345:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1369950-1370075:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1370259-1370429:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1371648-1371779:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1372943-1372986:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1373456-1373846:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1375447-1375840:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1376428-1376549:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1378041-1378091:1:exon

MATR3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 87175
gene: MATR3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: matrin-3 isoform X2
translation: MSKSFQQSSLSRDSQGHGRDLSAGIGLLAAATQSLNMPASLGRMNQGTARLASLMNLGMSSSLNQQGSHSALSSGSTSSHNLQSIFNIGSRGPLPLSSQHRGDADQATNILASFGLSARDLDELSRYPEDKITPENLPQILLQLKRRRAEEGYGRDGRSSTREPPYRVPRDDWEEKRHFRRDSFDDRGPSLNPVVDYDHGSRSQESGYYDRMDYEDDRLRDGERCRDESFYGETSHNYHKFDSEYDRMGRGPGPERSLFEKKRGAPPNSNIEDFHGFLPKGYPHLCSICDMPVHSNKEWNHHINGATHSRRCQLLLEIYPEWNPDSDSGHGMGDPFMLQQSTNPAPGILGPPPPPFHLGGPPVGPRGAGNGNMQGPRHMQKGRVETSRVVHIMDFQRGKNLRYQLLQLVEPFGIITNHLILNKINEAFIEMSTTEDAQAAVEYYSTTPALVFGKPVRVHLSQKYKRIKKPEGKPDQKTEPPKPELGRVIHLSNLPHSGYSDNAVLKLAEPYGKIKNYILMRMKSQAFIEMETREDALAMVEHCANKALWFQGRCVKVDLSEKYKKLVLRIPNKGVELLKKDKTRKRTYSPDSKDSPSDKKSKTEPAQKPESGNTEEKVKEEKQEDAAEPSGAKSGEQTEQDEPSLLLESEDELLVDEEEAAALLESGSSAGEDADVANLADVATEEKKDTPDDATVKTEGNVAATPAAKKKLKKRYVGGFPRSMEGFVTLDEVGDEEDSDHQKLRKSGLAAKAAGKSEDSLAEIKVDKIEEPEQESETLENGTKSEENAKAENVEASDATTAQDTEKSAQENTDPQGEQETKSVLEKPLVPDEFRIGPYQPNIPVENSG
SIO_010081: MATR3
subclass of: SO_0000673
so part of: MATR3
location: join(1361293..1362183,1366479..1366540,1367075..1367116,1367368..1367471,1368690..1368742,1369220..1369345,1369950..1370075,1370259..1370429,1371648..1371779,1372943..1372986,1373456..1373846,1375447..1375840,1378041..1378054)
location: region:1361293-1378054:1
so has part: feature:1361293-1362183:1:exon
so has part: feature:1366479-1366540:1:exon
so has part: feature:1367075-1367116:1:exon
so has part: feature:1367368-1367471:1:exon
so has part: feature:1368690-1368742:1:exon
so has part: feature:1369220-1369345:1:exon
so has part: feature:1369950-1370075:1:exon
so has part: feature:1370259-1370429:1:exon
so has part: feature:1371648-1371779:1:exon
so has part: feature:1372943-1372986:1:exon
so has part: feature:1373456-1373846:1:exon
so has part: feature:1375447-1375840:1:exon
so has part: feature:1378041-1378054:1:exon

XP_030812975.1
type: Protein
SIO_000068: ncbiprotein

position:1378054:1
position: 1378054
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1361293-1362183:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1366479-1366540:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1367075-1367116:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1367368-1367471:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1368690-1368742:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1369220-1369345:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1369950-1370075:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1370259-1370429:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1371648-1371779:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1372943-1372986:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1373456-1373846:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1375447-1375840:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1378041-1378054:1:exon

MATR3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 87175
gene: MATR3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: matrin-3 isoform X3
translation: MGDPFMLQQSTNPAPGILGPPPPPFHLGGPPVGPRGAGNGNMQGPRHMQKGRVETSRVVHIMDFQRGKNLRYQLLQLVEPFGIITNHLILNKINEAFIEMSTTEDAQAAVEYYSTTPALVFGKPVRVHLSQKYKRIKKPEGKPDQKTEPPKPELGRVIHLSNLPHSGYSDNAVLKLAEPYGKIKNYILMRMKSQAFIEMETREDALAMVEHCANKALWFQGRCVKVDLSEKYKKLVLRIPNKGVELLKKDKTRKRTYSPDSKDSPSDKKSKTEPAQKPESGNTEEKVKEEKQEDAAEPSGAKSGEQTEQDEPSLLLESEDELLVDEEEAAALLESGSSAGEDADVANLADVATEEKKDTPDDATVKTEGNVAATPAAKKKLKKRYVGGFPRSMEGFVTLDEVGDEEDSDHQKLRKSGLAAKAAGKSEDSLAEIKVDKIEEPEQESETLENGTKSEENAKAENVEASDATTAQDTEKSAQENTDPQGEQETKSVLEKPLVPDEFRIGPYQPNIPVGVNYVVPKTGFYCKLCSLFYTNEDVAKKTHCSSLPHYQKLKKILDKMAEDFRQKKEG
SIO_010081: MATR3
subclass of: SO_0000673
so part of: MATR3
location: join(1367115..1367116,1367368..1367471,1368690..1368742,1369220..1369345,1369950..1370075,1370259..1370429,1371648..1371779,1372943..1372986,1373456..1373846,1375447..1375840,1376428..1376549,1378041..1378091)
location: region:1367115-1378091:1
so has part: feature:1367115-1367116:1:exon
so has part: feature:1367368-1367471:1:exon
so has part: feature:1368690-1368742:1:exon
so has part: feature:1369220-1369345:1:exon
so has part: feature:1369950-1370075:1:exon
so has part: feature:1370259-1370429:1:exon
so has part: feature:1371648-1371779:1:exon
so has part: feature:1372943-1372986:1:exon
so has part: feature:1373456-1373846:1:exon
so has part: feature:1375447-1375840:1:exon
so has part: feature:1376428-1376549:1:exon
so has part: feature:1378041-1378091:1:exon

XP_030812976.1
type: Protein
SIO_000068: ncbiprotein

position:1367115:1
position: 1367115
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1367115-1367116:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1367368-1367471:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1368690-1368742:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1369220-1369345:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1369950-1370075:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1370259-1370429:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1371648-1371779:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1372943-1372986:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1373456-1373846:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1375447-1375840:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1376428-1376549:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1378041-1378091:1:exon

PAIP2
type: Gene
subclass of: SO_0000704
RO_0002162: 87175
gene: PAIP2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1381596..1389975
location: region:1381596-1389975:1
so has part: feature:1381596-1389975:1:exon
subclass of: SO_0000010

115908719
type: Gene
SIO_000068: ncbigene

position:1381596:1
position: 1381596
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1389975:1
position: 1389975
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1381596-1389975:1:exon

PAIP2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 87175
gene: PAIP2
product: poly(A) binding protein interacting protein 2, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 60 ESTs, 16 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
transcript id: XM_030957517.1
SIO_010081: PAIP2
subclass of: SO_0000673
so part of: PAIP2
location: join(1381596..1381735,1385136..1385301,1387484..1387663,1388862..1389975)
location: region:1381596-1389975:1
so has part: feature:1381596-1381735:1:exon
so has part: feature:1385136-1385301:1:exon
so has part: feature:1387484-1387663:1:exon
so has part: feature:1388862-1389975:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1381596-1381735:1:exon

position:1381735:1
position: 1381735
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1385136-1385301:1:exon

position:1385136:1
position: 1385136
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1385301:1
position: 1385301
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1387484-1387663:1:exon

position:1387484:1
position: 1387484
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1387663:1
position: 1387663
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1388862-1389975:1:exon

position:1388862:1
position: 1388862
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

PAIP2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 87175
gene: PAIP2
product: poly(A) binding protein interacting protein 2, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 48 ESTs, 16 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
transcript id: XM_030957518.1
SIO_010081: PAIP2
subclass of: SO_0000673
so part of: PAIP2
location: join(1381613..1381735,1385142..1385301,1387484..1387663,1388862..1389975)
location: region:1381613-1389975:1
so has part: feature:1381613-1381735:1:exon
so has part: feature:1385142-1385301:1:exon
so has part: feature:1387484-1387663:1:exon
so has part: feature:1388862-1389975:1:exon

position:1381613:1
position: 1381613
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1381613-1381735:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1385142-1385301:1:exon

position:1385142:1
position: 1385142
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1387484-1387663:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1388862-1389975:1:exon

PAIP2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 87175
gene: PAIP2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: polyadenylate-binding protein-interacting protein 2
translation: MKDPSRSSTSPSIISEDVIINGHSHEDDNPFAEYMWMENEEEFNRQIEEELWEEEFIERCFQEMLEEEEEHEWFIPARDLPQTMDQIQDQFNDLVISDSSSLEDLVVKSNLNPNAKEFVPGVKYLNI
SIO_010081: PAIP2
subclass of: SO_0000673
so part of: PAIP2
location: join(1385164..1385301,1387484..1387663,1388862..1388927)
location: region:1385164-1388927:1
so has part: feature:1385164-1385301:1:exon
so has part: feature:1387484-1387663:1:exon
so has part: feature:1388862-1388927:1:exon

XP_030813377.1
type: Protein
SIO_000068: ncbiprotein

position:1385164:1
position: 1385164
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1388927:1
position: 1388927
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1385164-1385301:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1387484-1387663:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1388862-1388927:1:exon

PAIP2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 87175
gene: PAIP2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: polyadenylate-binding protein-interacting protein 2
translation: MKDPSRSSTSPSIISEDVIINGHSHEDDNPFAEYMWMENEEEFNRQIEEELWEEEFIERCFQEMLEEEEEHEWFIPARDLPQTMDQIQDQFNDLVISDSSSLEDLVVKSNLNPNAKEFVPGVKYLNI
SIO_010081: PAIP2
subclass of: SO_0000673
so part of: PAIP2
location: join(1385164..1385301,1387484..1387663,1388862..1388927)
location: region:1385164-1388927:1
so has part: feature:1385164-1385301:1:exon
so has part: feature:1387484-1387663:1:exon
so has part: feature:1388862-1388927:1:exon

XP_030813378.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1385164-1385301:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1387484-1387663:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1388862-1388927:1:exon

SLC23A1
type: Gene
subclass of: SO_0000704
RO_0002162: 87175
gene: SLC23A1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1392248..1398505)
location: region:1392248-1398505:-1
so has part: feature:1392248-1398505:-1:exon
subclass of: SO_0000010

115908618
type: Gene
SIO_000068: ncbigene

position:1392248:-1
position: 1392248
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1398505:-1
position: 1398505
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1392248-1398505:-1:exon

SLC23A1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 87175
gene: SLC23A1
product: solute carrier family 23 member 1
exception: unclassified transcription discrepancy
note: The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: inserted 3 bases in 3 codons; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 7 mRNAs, 19 Proteins, and 16% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_030957355.1
SIO_010081: SLC23A1
subclass of: SO_0000673
so part of: SLC23A1
location: complement(join(1392248..1392486,1392600..1392695,1392833..1392976,1393127..1393256,1393333..1393438,1393558..1393705,1393881..1394037,1394141..1394261,1394831..1395012,1395539..1395606,1395683..1395771,1395841..1395998,1396087..1396191,1396379..1396450,1396919..1397550,1397627..1397731,1397916..1398022,1398306..1398505))
location: region:1392248-1398505:-1
so has part: feature:1398306-1398505:-1:exon
so has part: feature:1397916-1398022:-1:exon
so has part: feature:1397627-1397731:-1:exon
so has part: feature:1396919-1397550:-1:exon
so has part: feature:1396379-1396450:-1:exon
so has part: feature:1396087-1396191:-1:exon
so has part: feature:1395841-1395998:-1:exon
so has part: feature:1395683-1395771:-1:exon
so has part: feature:1395539-1395606:-1:exon
so has part: feature:1394831-1395012:-1:exon
so has part: feature:1394141-1394261:-1:exon
so has part: feature:1393881-1394037:-1:exon
so has part: feature:1393558-1393705:-1:exon
so has part: feature:1393333-1393438:-1:exon
so has part: feature:1393127-1393256:-1:exon
so has part: feature:1392833-1392976:-1:exon
so has part: feature:1392600-1392695:-1:exon
so has part: feature:1392248-1392486:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1398306-1398505:-1:exon

position:1398306:-1
position: 1398306
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1397916-1398022:-1:exon

position:1397916:-1
position: 1397916
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1398022:-1
position: 1398022
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1397627-1397731:-1:exon

position:1397627:-1
position: 1397627
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1397731:-1
position: 1397731
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1396919-1397550:-1:exon

position:1396919:-1
position: 1396919
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1397550:-1
position: 1397550
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1396379-1396450:-1:exon

position:1396379:-1
position: 1396379
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1396450:-1
position: 1396450
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1396087-1396191:-1:exon

position:1396087:-1
position: 1396087
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1396191:-1
position: 1396191
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1395841-1395998:-1:exon

position:1395841:-1
position: 1395841
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1395998:-1
position: 1395998
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1395683-1395771:-1:exon

position:1395683:-1
position: 1395683
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1395771:-1
position: 1395771
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:1395539-1395606:-1:exon

position:1395539:-1
position: 1395539
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1395606:-1
position: 1395606
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:1394831-1395012:-1:exon

position:1394831:-1
position: 1394831
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1395012:-1
position: 1395012
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:1394141-1394261:-1:exon

position:1394141:-1
position: 1394141
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1394261:-1
position: 1394261
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:1393881-1394037:-1:exon

position:1393881:-1
position: 1393881
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1394037:-1
position: 1394037
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:1393558-1393705:-1:exon

position:1393558:-1
position: 1393558
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1393705:-1
position: 1393705
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:1393333-1393438:-1:exon

position:1393333:-1
position: 1393333
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1393438:-1
position: 1393438
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:1393127-1393256:-1:exon

position:1393127:-1
position: 1393127
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1393256:-1
position: 1393256
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:1392833-1392976:-1:exon

position:1392833:-1
position: 1392833
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1392976:-1
position: 1392976
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:1392600-1392695:-1:exon

position:1392600:-1
position: 1392600
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1392695:-1
position: 1392695
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:1392248-1392486:-1:exon

position:1392486:-1
position: 1392486
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

SLC23A1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 87175
gene: SLC23A1
exception: unclassified translation discrepancy
note: The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: inserted 3 bases in 3 codons; Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: LOW QUALITY PROTEIN: solute carrier family 23 member 1
translation: MADPGRGCARRFHNPQPMAXPPPAAATARPGTKVLPTAIKPPXAAAAPPGXRRRMGTRSGELAQPQNGNLALGPAGSPHAPGKELPVADRQDPGAGTRPPRPEVDMLYRIEDVPPWYLCILLGFQHYLTCFSGTIAVPFLLAESLCVGKDQLTVSYLIGTIFTCVGITTLIQTTVGIRLPLFQASALAFLVPAKSILALDKWRCPPEEQIYGNWSLPLNTSHIWQPRMREIQGAIIVSSLVEVVIGLLGLPGALLSYIGPLTVTPTVSLIGLSVFQAAGDRAGSHWGISVLTIFLIVLFAQYLRQVAICLPGYRRGHGFVLLRIQIFKMFPIILAIMLVWLICYVLTRTGVFPSRPEEYGYKARTDARGEILSVAPWFRVPYPCQWGLPTVTSAAVLGMFSATLAGIIESIGDYYSCARLAGAPPPPVHAINRGIFTEGISCIIAGLLGTGNGSTSSSPNIGVLGITKVGSRRVIQYGAGIMLLLGTIGKFTALFASLPDPVLGGMFCTLFGMITAVGLSNLQFVDMNSSRNLFVLGFAMFFGLTLPNYLDSHPGAINTGVPELDQILTVLLTTEMFVGGTIAFVLDNTIPGTQEERGLVQWKAGAHSDSSSSASLRSYDFPFGMGAVRSSRWLRNVPICPVFTGFRARPGGGGAAAAEGPDGGSVCTKV
SIO_010081: SLC23A1
subclass of: SO_0000673
so part of: SLC23A1
location: complement(join(1392248..1392486,1392600..1392695,1392833..1392976,1393127..1393256,1393333..1393438,1393558..1393705,1393881..1394037,1394141..1394261,1394831..1395012,1395539..1395606,1395683..1395771,1395841..1395998,1396087..1396191,1396379..1396450,1396919..1397113))
location: region:1392248-1397113:-1
so has part: feature:1396919-1397113:-1:exon
so has part: feature:1396379-1396450:-1:exon
so has part: feature:1396087-1396191:-1:exon
so has part: feature:1395841-1395998:-1:exon
so has part: feature:1395683-1395771:-1:exon
so has part: feature:1395539-1395606:-1:exon
so has part: feature:1394831-1395012:-1:exon
so has part: feature:1394141-1394261:-1:exon
so has part: feature:1393881-1394037:-1:exon
so has part: feature:1393558-1393705:-1:exon
so has part: feature:1393333-1393438:-1:exon
so has part: feature:1393127-1393256:-1:exon
so has part: feature:1392833-1392976:-1:exon
so has part: feature:1392600-1392695:-1:exon
so has part: feature:1392248-1392486:-1:exon

XP_030813215.1
type: Protein
SIO_000068: ncbiprotein

position:1397113:-1
position: 1397113
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1396919-1397113:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1396379-1396450:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1396087-1396191:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1395841-1395998:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1395683-1395771:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1395539-1395606:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1394831-1395012:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1394141-1394261:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1393881-1394037:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1393558-1393705:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1393333-1393438:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1393127-1393256:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1392833-1392976:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1392600-1392695:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1392248-1392486:-1:exon

MZB1
type: Gene
subclass of: SO_0000704
RO_0002162: 87175
gene: MZB1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1397376..1398500)
location: region:1397376-1398500:-1
so has part: feature:1397376-1398500:-1:exon
subclass of: SO_0000010

115908815
type: Gene
SIO_000068: ncbigene

position:1397376:-1
position: 1397376
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1398500:-1
position: 1398500
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1397376-1398500:-1:exon

MZB1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 87175
gene: MZB1
product: marginal zone B and B1 cell specific protein
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins
transcript id: XM_030957678.1
SIO_010081: MZB1
subclass of: SO_0000673
so part of: MZB1
location: complement(join(1397376..1397550,1397627..1397731,1397916..1398022,1398306..1398500))
location: region:1397376-1398500:-1
so has part: feature:1398306-1398500:-1:exon
so has part: feature:1397916-1398022:-1:exon
so has part: feature:1397627-1397731:-1:exon
so has part: feature:1397376-1397550:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1398306-1398500:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1397916-1398022:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1397627-1397731:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1397376-1397550:-1:exon

MZB1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 87175
gene: MZB1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: marginal zone B- and B1-cell-specific protein
translation: MRAALAAWLVLSLLGGTGAEDTCGGDPPAAPSRSIPAPQLSPEERLSPHMPESLRCDACHAIAFQIEEQLRKAEGKVGKKALKESDYIEVLERSCSQDWESYGLLELDGEKRLSGPGLPSQQPLSVLVSGGPWPGRLSKLCHGYVGERGEAQIYGAHRRGPAALRQLLCHGDKGPCAGRKERPEPRKAPQNEL
SIO_010081: MZB1
subclass of: SO_0000673
so part of: MZB1
location: complement(join(1397376..1397550,1397627..1397731,1397916..1398022,1398306..1398500))
location: region:1397376-1398500:-1
so has part: feature:1398306-1398500:-1:exon
so has part: feature:1397916-1398022:-1:exon
so has part: feature:1397627-1397731:-1:exon
so has part: feature:1397376-1397550:-1:exon

XP_030813538.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1398306-1398500:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1397916-1398022:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1397627-1397731:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1397376-1397550:-1:exon

DNAJC18
type: Gene
subclass of: SO_0000704
RO_0002162: 87175
gene: DNAJC18
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1407310..1421689)
location: region:1407310-1421689:-1
so has part: feature:1407310-1421689:-1:exon
subclass of: SO_0000010

115908781
type: Gene
SIO_000068: ncbigene

position:1407310:-1
position: 1407310
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1421689:-1
position: 1421689
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1407310-1421689:-1:exon

DNAJC18
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 87175
gene: DNAJC18
product: DnaJ heat shock protein family (Hsp40) member C18, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 14 ESTs, 16 Proteins, and 97% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_030957621.1
SIO_010081: DNAJC18
subclass of: SO_0000673
so part of: DNAJC18
location: complement(join(1407310..1407860,1409735..1409815,1413308..1413480,1415153..1415262,1417040..1417152,1419837..1420022,1421325..1421470,1421582..1421689))
location: region:1407310-1421689:-1
so has part: feature:1421582-1421689:-1:exon
so has part: feature:1421325-1421470:-1:exon
so has part: feature:1419837-1420022:-1:exon
so has part: feature:1417040-1417152:-1:exon
so has part: feature:1415153-1415262:-1:exon
so has part: feature:1413308-1413480:-1:exon
so has part: feature:1409735-1409815:-1:exon
so has part: feature:1407310-1407860:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1421582-1421689:-1:exon

position:1421582:-1
position: 1421582
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1421325-1421470:-1:exon

position:1421325:-1
position: 1421325
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1421470:-1
position: 1421470
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1419837-1420022:-1:exon

position:1419837:-1
position: 1419837
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1420022:-1
position: 1420022
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1417040-1417152:-1:exon

position:1417040:-1
position: 1417040
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1417152:-1
position: 1417152
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1415153-1415262:-1:exon

position:1415153:-1
position: 1415153
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1415262:-1
position: 1415262
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1413308-1413480:-1:exon

position:1413308:-1
position: 1413308
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1413480:-1
position: 1413480
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1409735-1409815:-1:exon

position:1409735:-1
position: 1409735
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1409815:-1
position: 1409815
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1407310-1407860:-1:exon

position:1407860:-1
position: 1407860
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

DNAJC18
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 87175
gene: DNAJC18
product: DnaJ heat shock protein family (Hsp40) member C18, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 mRNAs, 40 ESTs, 20 Proteins, and 98% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XM_030957622.1
SIO_010081: DNAJC18
subclass of: SO_0000673
so part of: DNAJC18
location: complement(join(1407310..1409815,1413308..1413480,1415153..1415262,1417040..1417152,1419837..1420022,1421325..1421470,1421582..1421689))
location: region:1407310-1421689:-1
so has part: feature:1421582-1421689:-1:exon
so has part: feature:1421325-1421470:-1:exon
so has part: feature:1419837-1420022:-1:exon
so has part: feature:1417040-1417152:-1:exon
so has part: feature:1415153-1415262:-1:exon
so has part: feature:1413308-1413480:-1:exon
so has part: feature:1407310-1409815:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1421582-1421689:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1421325-1421470:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1419837-1420022:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1417040-1417152:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1415153-1415262:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1413308-1413480:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1407310-1409815:-1:exon

DNAJC18
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 87175
gene: DNAJC18
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: dnaJ homolog subfamily C member 18 isoform X1
translation: MTYTAEQLDGVQRIKRCRDYYEILGVSRDAGEEELKRAYRRLALKFHPDKNRAPGATEAFKAIGNAFAVLSNPEKRLRYDELGSDHEHVSSGQARHYNYYTEFEADITPEEIFNVFFGGHFPTGNIHMFSNVARDAHYYPRRHRAERAWTQEPEEEEHRPQNSYSAFIQLMPVFIIIIVSVITQLMATNPPYSLFYKSSIGHVVSRETENLQVPYYVDKNFEKNYQGAELQELEKTVEKDYIDYIQTSCWKEKQQKSDLSNLAKLYRDERLKQKAESLKLEHWLESSLPFLCDCRRMQVGRPNLATSWTHNVLHGA
SIO_010081: DNAJC18
subclass of: SO_0000673
so part of: DNAJC18
location: complement(join(1407757..1407860,1409735..1409815,1413308..1413480,1415153..1415262,1417040..1417152,1419837..1420022,1421325..1421470,1421582..1421619))
location: region:1407757-1421619:-1
so has part: feature:1421582-1421619:-1:exon
so has part: feature:1421325-1421470:-1:exon
so has part: feature:1419837-1420022:-1:exon
so has part: feature:1417040-1417152:-1:exon
so has part: feature:1415153-1415262:-1:exon
so has part: feature:1413308-1413480:-1:exon
so has part: feature:1409735-1409815:-1:exon
so has part: feature:1407757-1407860:-1:exon

XP_030813481.1
type: Protein
SIO_000068: ncbiprotein

position:1407757:-1
position: 1407757
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1421619:-1
position: 1421619
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1421582-1421619:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1421325-1421470:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1419837-1420022:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1417040-1417152:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1415153-1415262:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1413308-1413480:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1409735-1409815:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1407757-1407860:-1:exon

DNAJC18
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 87175
gene: DNAJC18
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: dnaJ homolog subfamily C member 18 isoform X2
translation: MTYTAEQLDGVQRIKRCRDYYEILGVSRDAGEEELKRAYRRLALKFHPDKNRAPGATEAFKAIGNAFAVLSNPEKRLRYDELGSDHEHVSSGQARHYNYYTEFEADITPEEIFNVFFGGHFPTGNIHMFSNVARDAHYYPRRHRAERAWTQEPEEEEHRPQNSYSAFIQLMPVFIIIIVSVITQLMATNPPYSLFYKSSIGHVVSRETENLQVPYYVDKNFEKNYQGAELQELEKTVEKDYIDYIQTSCWKEKQQKSDLSNLAKLYRDERLKQKAESLKLEHCEKLSSLIGMHKGG
SIO_010081: DNAJC18
subclass of: SO_0000673
so part of: DNAJC18
location: complement(join(1409691..1409815,1413308..1413480,1415153..1415262,1417040..1417152,1419837..1420022,1421325..1421470,1421582..1421619))
location: region:1409691-1421619:-1
so has part: feature:1421582-1421619:-1:exon
so has part: feature:1421325-1421470:-1:exon
so has part: feature:1419837-1420022:-1:exon
so has part: feature:1417040-1417152:-1:exon
so has part: feature:1415153-1415262:-1:exon
so has part: feature:1413308-1413480:-1:exon
so has part: feature:1409691-1409815:-1:exon

XP_030813482.1
type: Protein
SIO_000068: ncbiprotein

position:1409691:-1
position: 1409691
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1421582-1421619:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1421325-1421470:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1419837-1420022:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1417040-1417152:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1415153-1415262:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1413308-1413480:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1409691-1409815:-1:exon

ECSCR
type: Gene
subclass of: SO_0000704
RO_0002162: 87175
gene: ECSCR
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1423282..1441495)
location: region:1423282-1441495:-1
so has part: feature:1423282-1441495:-1:exon
subclass of: SO_0000010

115908679
type: Gene
SIO_000068: ncbigene

position:1423282:-1
position: 1423282
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1441495:-1
position: 1441495
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1423282-1441495:-1:exon

ECSCR
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 87175
gene: ECSCR
product: endothelial cell surface expressed chemotaxis and apoptosis regulator, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XM_030957461.1
SIO_010081: ECSCR
subclass of: SO_0000673
so part of: ECSCR
location: complement(join(1423282..1424108,1424651..1424750,1425861..1425897,1426439..1426537,1427316..1427417,1427950..1428018,1429838..1429891,1430362..1430478,1431797..1431847,1432372..1432413,1441362..1441495))
location: region:1423282-1441495:-1
so has part: feature:1441362-1441495:-1:exon
so has part: feature:1432372-1432413:-1:exon
so has part: feature:1431797-1431847:-1:exon
so has part: feature:1430362-1430478:-1:exon
so has part: feature:1429838-1429891:-1:exon
so has part: feature:1427950-1428018:-1:exon
so has part: feature:1427316-1427417:-1:exon
so has part: feature:1426439-1426537:-1:exon
so has part: feature:1425861-1425897:-1:exon
so has part: feature:1424651-1424750:-1:exon
so has part: feature:1423282-1424108:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1441362-1441495:-1:exon

position:1441362:-1
position: 1441362
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1432372-1432413:-1:exon

position:1432372:-1
position: 1432372
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1432413:-1
position: 1432413
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1431797-1431847:-1:exon

position:1431797:-1
position: 1431797
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1431847:-1
position: 1431847
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1430362-1430478:-1:exon

position:1430362:-1
position: 1430362
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1430478:-1
position: 1430478
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1429838-1429891:-1:exon

position:1429838:-1
position: 1429838
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1429891:-1
position: 1429891
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1427950-1428018:-1:exon

position:1427950:-1
position: 1427950
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1428018:-1
position: 1428018
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1427316-1427417:-1:exon

position:1427316:-1
position: 1427316
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1427417:-1
position: 1427417
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1426439-1426537:-1:exon

position:1426439:-1
position: 1426439
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1426537:-1
position: 1426537
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:1425861-1425897:-1:exon

position:1425861:-1
position: 1425861
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1425897:-1
position: 1425897
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:1424651-1424750:-1:exon

position:1424651:-1
position: 1424651
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1424750:-1
position: 1424750
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:1423282-1424108:-1:exon

position:1424108:-1
position: 1424108
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

ECSCR
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 87175
gene: ECSCR
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: endothelial cell-specific chemotaxis regulator isoform X2
translation: MPLPSLRALLGLLLLLPGSTAPTNSSTPAGTGPSQPTTSSPEAKSHSSEPSVKATPVTNLSITSVVQTTTAKPSPTTTATLTATTERDDKSSGNRSTAAPSPASQGQDHMRNESTTTSATQGASSSQTGTSKPITPAPNSSSQLTDPTTPTDEKSPLTVAAFGVISFVVILIVVVIILVSVVSLRFKCNHSKDSEDKQKPGTSMVSESCSADTSQKGNSITLISMKNINTNNSMSYPPSEKVL
SIO_010081: ECSCR
subclass of: SO_0000673
so part of: ECSCR
location: complement(join(1424100..1424108,1424651..1424750,1425861..1425897,1426439..1426537,1427316..1427417,1427950..1428018,1429838..1429891,1430362..1430478,1431797..1431847,1432372..1432413,1441362..1441413))
location: region:1424100-1441413:-1
so has part: feature:1441362-1441413:-1:exon
so has part: feature:1432372-1432413:-1:exon
so has part: feature:1431797-1431847:-1:exon
so has part: feature:1430362-1430478:-1:exon
so has part: feature:1429838-1429891:-1:exon
so has part: feature:1427950-1428018:-1:exon
so has part: feature:1427316-1427417:-1:exon
so has part: feature:1426439-1426537:-1:exon
so has part: feature:1425861-1425897:-1:exon
so has part: feature:1424651-1424750:-1:exon
so has part: feature:1424100-1424108:-1:exon

XP_030813321.1
type: Protein
SIO_000068: ncbiprotein

position:1424100:-1
position: 1424100
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1441413:-1
position: 1441413
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1441362-1441413:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1432372-1432413:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1431797-1431847:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1430362-1430478:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1429838-1429891:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1427950-1428018:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1427316-1427417:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1426439-1426537:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1425861-1425897:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1424651-1424750:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1424100-1424108:-1:exon

ECSCR
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 87175
gene: ECSCR
product: endothelial cell surface expressed chemotaxis and apoptosis regulator, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 97% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
transcript id: XM_030957460.1
SIO_010081: ECSCR
subclass of: SO_0000673
so part of: ECSCR
location: complement(join(1424624..1424750,1425861..1425897,1426439..1426537,1427316..1427417,1427950..1428018,1429838..1429891,1430362..1430478,1431797..1431847,1432372..1432413,1441362..1441495))
location: region:1424624-1441495:-1
so has part: feature:1441362-1441495:-1:exon
so has part: feature:1432372-1432413:-1:exon
so has part: feature:1431797-1431847:-1:exon
so has part: feature:1430362-1430478:-1:exon
so has part: feature:1429838-1429891:-1:exon
so has part: feature:1427950-1428018:-1:exon
so has part: feature:1427316-1427417:-1:exon
so has part: feature:1426439-1426537:-1:exon
so has part: feature:1425861-1425897:-1:exon
so has part: feature:1424624-1424750:-1:exon

position:1424624:-1
position: 1424624
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1441362-1441495:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1432372-1432413:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1431797-1431847:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1430362-1430478:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1429838-1429891:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1427950-1428018:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1427316-1427417:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1426439-1426537:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1425861-1425897:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1424624-1424750:-1:exon

ECSCR
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 87175
gene: ECSCR
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: endothelial cell-specific chemotaxis regulator isoform X1
translation: MPLPSLRALLGLLLLLPGSTAPTNSSTPAGTGPSQPTTSSPEAKSHSSEPSVKATPVTNLSITSVVQTTTAKPSPTTTATLTATTERDDKSSGNRSTAAPSPASQGQDHMRNESTTTSATQGASSSQTGTSKPITPAPNSSSQLTDPTTPTDEKSPLTVAAFGVISFVVILIVVVIILVSVVSLRFKCNHSKDSEDKQKPGTSMVSESCSADTSQKGNSITLISMKNINTNNSMSYPPSEKVSLFSLAF
SIO_010081: ECSCR
subclass of: SO_0000673
so part of: ECSCR
location: complement(join(1424624..1424750,1425861..1425897,1426439..1426537,1427316..1427417,1427950..1428018,1429838..1429891,1430362..1430478,1431797..1431847,1432372..1432413,1441362..1441413))
location: region:1424624-1441413:-1
so has part: feature:1441362-1441413:-1:exon
so has part: feature:1432372-1432413:-1:exon
so has part: feature:1431797-1431847:-1:exon
so has part: feature:1430362-1430478:-1:exon
so has part: feature:1429838-1429891:-1:exon
so has part: feature:1427950-1428018:-1:exon
so has part: feature:1427316-1427417:-1:exon
so has part: feature:1426439-1426537:-1:exon
so has part: feature:1425861-1425897:-1:exon
so has part: feature:1424624-1424750:-1:exon

XP_030813320.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1441362-1441413:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1432372-1432413:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1431797-1431847:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1430362-1430478:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1429838-1429891:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1427950-1428018:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1427316-1427417:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1426439-1426537:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1425861-1425897:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1424624-1424750:-1:exon

SMIM33
type: Gene
subclass of: SO_0000704
RO_0002162: 87175
gene: SMIM33
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1444161..1446924
location: region:1444161-1446924:1
so has part: feature:1444161-1446924:1:exon
subclass of: SO_0000010

115908703
type: Gene
SIO_000068: ncbigene

position:1444161:1
position: 1444161
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1446924:1
position: 1446924
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1444161-1446924:1:exon

SMIM33
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 87175
gene: SMIM33
product: small integral membrane protein 33, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_030957494.1
SIO_010081: SMIM33
subclass of: SO_0000673
so part of: SMIM33
location: join(1444161..1444416,1444755..1446924)
location: region:1444161-1446924:1
so has part: feature:1444161-1444416:1:exon
so has part: feature:1444755-1446924:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1444161-1444416:1:exon

position:1444416:1
position: 1444416
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1444755-1446924:1:exon

position:1444755:1
position: 1444755
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

SMIM33
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 87175
gene: SMIM33
product: small integral membrane protein 33, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XM_030957493.1
SIO_010081: SMIM33
subclass of: SO_0000673
so part of: SMIM33
location: join(1444161..1444416,1444847..1446924)
location: region:1444161-1446924:1
so has part: feature:1444161-1444416:1:exon
so has part: feature:1444847-1446924:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1444161-1444416:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1444847-1446924:1:exon

position:1444847:1
position: 1444847
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

SMIM33
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 87175
gene: SMIM33
product: small integral membrane protein 33, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_030957495.1
SIO_010081: SMIM33
subclass of: SO_0000673
so part of: SMIM33
location: join(1444197..1444299,1444847..1446924)
location: region:1444197-1446924:1
so has part: feature:1444197-1444299:1:exon
so has part: feature:1444847-1446924:1:exon

position:1444197:1
position: 1444197
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1444197-1444299:1:exon

position:1444299:1
position: 1444299
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1444847-1446924:1:exon

SMIM33
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 87175
gene: SMIM33
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: small integral membrane protein 33
translation: MNASVAGSQLRQPELQDVAAFTPVSIVRSVTKKSDALPVISVIVVLFVLLAVFIVLLVHYGPQLRTVQVTLHHEPMAQHMDTVLLTHWRHLDAHGKMGSAGVTCHCSCSHHLPLGSAEPNVIEITYL
SIO_010081: SMIM33
subclass of: SO_0000673
so part of: SMIM33
location: 1444863..1445246
location: region:1444863-1445246:1
so has part: feature:1444863-1445246:1:exon

XP_030813353.1
type: Protein
SIO_000068: ncbiprotein

position:1444863:1
position: 1444863
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1445246:1
position: 1445246
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1444863-1445246:1:exon

SMIM33
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 87175
gene: SMIM33
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: small integral membrane protein 33
translation: MNASVAGSQLRQPELQDVAAFTPVSIVRSVTKKSDALPVISVIVVLFVLLAVFIVLLVHYGPQLRTVQVTLHHEPMAQHMDTVLLTHWRHLDAHGKMGSAGVTCHCSCSHHLPLGSAEPNVIEITYL
SIO_010081: SMIM33
subclass of: SO_0000673
so part of: SMIM33
location: 1444863..1445246
location: region:1444863-1445246:1
so has part: feature:1444863-1445246:1:exon

XP_030813354.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1444863-1445246:1:exon

SMIM33
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 87175
gene: SMIM33
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: small integral membrane protein 33
translation: MNASVAGSQLRQPELQDVAAFTPVSIVRSVTKKSDALPVISVIVVLFVLLAVFIVLLVHYGPQLRTVQVTLHHEPMAQHMDTVLLTHWRHLDAHGKMGSAGVTCHCSCSHHLPLGSAEPNVIEITYL
SIO_010081: SMIM33
subclass of: SO_0000673
so part of: SMIM33
location: 1444863..1445246
location: region:1444863-1445246:1
so has part: feature:1444863-1445246:1:exon

XP_030813355.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1444863-1445246:1:exon

PCDH12
type: Gene
subclass of: SO_0000704
RO_0002162: 87175
gene: PCDH12
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1452592..1463220
location: region:1452592-1463220:1
so has part: feature:1452592-1463220:1:exon
subclass of: SO_0000010

115908878
type: Gene
SIO_000068: ncbigene

position:1452592:1
position: 1452592
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1463220:1
position: 1463220
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1452592-1463220:1:exon

PCDH12
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 87175
gene: PCDH12
product: protocadherin 12
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_030957753.1
SIO_010081: PCDH12
subclass of: SO_0000673
so part of: PCDH12
location: join(1452592..1455644,1456170..1456264,1457382..1457569,1462296..1463220)
location: region:1452592-1463220:1
so has part: feature:1452592-1455644:1:exon
so has part: feature:1456170-1456264:1:exon
so has part: feature:1457382-1457569:1:exon
so has part: feature:1462296-1463220:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1452592-1455644:1:exon

position:1455644:1
position: 1455644
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1456170-1456264:1:exon

position:1456170:1
position: 1456170
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1456264:1
position: 1456264
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1457382-1457569:1:exon

position:1457382:1
position: 1457382
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1457569:1
position: 1457569
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1462296-1463220:1:exon

position:1462296:1
position: 1462296
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

PCDH12
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 87175
gene: PCDH12
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protocadherin-12
translation: MPRPCGGPEDSPGMRWPAGQPMAARRGRGGSASSVLGLSRSALRLPALWWWYLFLSADAQEVATFTVQYRVLEEVPPGTVIGSLAEHFEGGESGEAAETFQLMETPGRFPLHVGSGDGVLSTAGRVDREQLCRHSDPCWVSFDVLAAQNPALIHVEVQVMDINDNAPRFPTPELELEISESASLRTRIPLDRALDADAGPNARCSYALSPSEHFALEVVSSSDGTRHAELVVVKEVDRELHSSFDLVLTATDHGEPPKSGTALIKVIVLDSNDNSPVFAESSLTVEVWEDAQPGTLLVTVTATDPDQGPNGEIEYSLSRHAPPEVLSTFSIDARTGSILLRLPLDYEETHAYELDVQARDLGANPIPAHCKVLIKVLDVNDNAPDVHVTWATREPVLSEALPKDSFVALVTASDPDSGSNGQVLCSLSQGYEHFRLKRTNSHSFALLTSASLDRERRAEYNLTLVVRDMGDLSLAVLKHLTICISDVNDNAPAFEKVAYEAAVAENGEAPAFLLTVRATDPDLGSNGKVTYRILDPSALGLVSVDPITGDIFALRAFDYEQVRSLEFLVTAEDGGHPKLASNISIRLAVLDRNDNAPIITTPALVGGVATLSVLINVDTGCCWVVPGNGSTQGAAAMTNSTLVSCPANPFLFTIVARDVDSGTNGALRYDLVGGDDAGLFILDPLLGQVSLNASNASSLAGSQRELLVRVSDQGDTPLHTLARLRLLFRRHGAFSKMSARDPGWPSLSVLLLICLAALLGGCVLLLALTLSLRKKDKKDGMAYNCREAEDARRQQQLKKPHRQIQKADIHLVPLLRGRPREPEPLRACQEEQPGTGTPAAGGSPQAPLHLTPTLYRTLRNQRTQKGSEEQQGTLELPVLQRRPCPPHRAKQAVREAAGPAEAPPHGKSLVKPPMGELRVPAEQPVGAGGPGQPQPHQQILRSLVRLSLVALAEQSSTGEFAMESPPVQQISQLLSLLHQGQFQPKTNYRGNKYTAKNGSRAAGLDMGLDTGLDTGLDTDCLSTKDSGHGESEAGDRDCDSAVELSVQQLVGEELETLLEPQAELALKRLTAADPEWVARLSLPLTSSYKDNVFCPDSPCSPEDEEAARQEKPRTFETFGKGAGADPGGSGTRLASTFLSEMSTLFEMILSQKVQVHSEAGAGLLRQLSARGHSLGLGDAAPGL
SIO_010081: PCDH12
subclass of: SO_0000673
so part of: PCDH12
location: join(1452741..1455644,1456170..1456264,1457382..1457569,1462296..1462660)
location: region:1452741-1462660:1
so has part: feature:1452741-1455644:1:exon
so has part: feature:1456170-1456264:1:exon
so has part: feature:1457382-1457569:1:exon
so has part: feature:1462296-1462660:1:exon

XP_030813613.1
type: Protein
SIO_000068: ncbiprotein

position:1452741:1
position: 1452741
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1462660:1
position: 1462660
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1452741-1455644:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1456170-1456264:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1457382-1457569:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1462296-1462660:1:exon

DELE1
type: Gene
subclass of: SO_0000704
RO_0002162: 87175
gene: DELE1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1463947..1482142)
location: region:1463947-1482142:-1
so has part: feature:1463947-1482142:-1:exon
subclass of: SO_0000010

115908819
type: Gene
SIO_000068: ncbigene

position:1463947:-1
position: 1463947
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1482142:-1
position: 1482142
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1463947-1482142:-1:exon

DELE1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 87175
gene: DELE1
product: DAP3 binding cell death enhancer 1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 ESTs, 1 Protein, and 98% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_030957683.1
SIO_010081: DELE1
subclass of: SO_0000673
so part of: DELE1
location: complement(join(1463947..1465975,1466842..1466998,1470252..1470344,1471183..1471341,1472154..1472296,1473013..1473106,1474821..1474876,1481163..1481306,1481618..1481738,1481855..1481951,1482036..1482142))
location: region:1463947-1482142:-1
so has part: feature:1482036-1482142:-1:exon
so has part: feature:1481855-1481951:-1:exon
so has part: feature:1481618-1481738:-1:exon
so has part: feature:1481163-1481306:-1:exon
so has part: feature:1474821-1474876:-1:exon
so has part: feature:1473013-1473106:-1:exon
so has part: feature:1472154-1472296:-1:exon
so has part: feature:1471183-1471341:-1:exon
so has part: feature:1470252-1470344:-1:exon
so has part: feature:1466842-1466998:-1:exon
so has part: feature:1463947-1465975:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1482036-1482142:-1:exon

position:1482036:-1
position: 1482036
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1481855-1481951:-1:exon

position:1481855:-1
position: 1481855
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1481951:-1
position: 1481951
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1481618-1481738:-1:exon

position:1481618:-1
position: 1481618
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1481738:-1
position: 1481738
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1481163-1481306:-1:exon

position:1481163:-1
position: 1481163
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1481306:-1
position: 1481306
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1474821-1474876:-1:exon

position:1474821:-1
position: 1474821
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1474876:-1
position: 1474876
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1473013-1473106:-1:exon

position:1473013:-1
position: 1473013
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1473106:-1
position: 1473106
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1472154-1472296:-1:exon

position:1472154:-1
position: 1472154
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1472296:-1
position: 1472296
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1471183-1471341:-1:exon

position:1471183:-1
position: 1471183
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1471341:-1
position: 1471341
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:1470252-1470344:-1:exon

position:1470252:-1
position: 1470252
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1470344:-1
position: 1470344
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:1466842-1466998:-1:exon

position:1466842:-1
position: 1466842
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1466998:-1
position: 1466998
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:1463947-1465975:-1:exon

position:1465975:-1
position: 1465975
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

DELE1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 87175
gene: DELE1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: death ligand signal enhancer
translation: MWRLLLLLGRGRCAPTPARPACAPGLGGGRSPSPERAPACQDGPERGGRRQPLPGLVPRYSVREAVTWGAVGALLLQLLRQIAGLRSLQDARTERRLPWRSSLPPQPAEVTEASTSSPGEQLGPQFLQKASPEAVAENSSSGIPSGQGERQPWAEAGEFQIPVSSRVGPVLHSAKGDPAQRGHLEEAAFQLQQIFRIDISIALNILGTESMRAGHCRAAFTCFKLAADRGYSKAQFNVGLCYEHGRGTEKDLEKAGFYYCQAASSRHPMAQYRYARYLLQHGPGSPWDRHHKAVALLEQAAGAGITEAQAYLGVFYMRGLQPQEKRGLKYLLQAANSGDAQSRFHVGVCYEQGLGVPRDVAAALRHYRQSAAMGNRQARDRLRAWQQELQDVHTKHPFPSGLRASSSSPDFWTIEPVSAGLHSSQPGQCGLTLPHSWSTGTLHVMLLSSAGWSCAFRARTVPLELQGWEPQHCWQQVTPAGRGQGSPWCGLEPGWQ
SIO_010081: DELE1
subclass of: SO_0000673
so part of: DELE1
location: complement(join(1465656..1465975,1466842..1466998,1470252..1470344,1471183..1471341,1472154..1472296,1473013..1473106,1474821..1474876,1481163..1481306,1481618..1481738,1481855..1481951,1482036..1482142))
location: region:1465656-1482142:-1
so has part: feature:1482036-1482142:-1:exon
so has part: feature:1481855-1481951:-1:exon
so has part: feature:1481618-1481738:-1:exon
so has part: feature:1481163-1481306:-1:exon
so has part: feature:1474821-1474876:-1:exon
so has part: feature:1473013-1473106:-1:exon
so has part: feature:1472154-1472296:-1:exon
so has part: feature:1471183-1471341:-1:exon
so has part: feature:1470252-1470344:-1:exon
so has part: feature:1466842-1466998:-1:exon
so has part: feature:1465656-1465975:-1:exon

XP_030813543.1
type: Protein
SIO_000068: ncbiprotein

position:1465656:-1
position: 1465656
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1482036-1482142:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1481855-1481951:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1481618-1481738:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1481163-1481306:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1474821-1474876:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1473013-1473106:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1472154-1472296:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1471183-1471341:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1470252-1470344:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1466842-1466998:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1465656-1465975:-1:exon

PCDH1
type: Gene
subclass of: SO_0000704
RO_0002162: 87175
gene: PCDH1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1819669..1878623)
location: region:1819669-1878623:-1
so has part: feature:1819669-1878623:-1:exon
subclass of: SO_0000010

115908697
type: Gene
SIO_000068: ncbigene

position:1819669:-1
position: 1819669
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1878623:-1
position: 1878623
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1819669-1878623:-1:exon

PCDH1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 87175
gene: PCDH1
product: protocadherin 1, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 ESTs, 10 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XM_030957486.1
SIO_010081: PCDH1
subclass of: SO_0000673
so part of: PCDH1
location: complement(join(1819669..1822580,1849332..1849551,1866219..1868411,1869952..1870766,1878513..1878623))
location: region:1819669-1878623:-1
so has part: feature:1878513-1878623:-1:exon
so has part: feature:1869952-1870766:-1:exon
so has part: feature:1866219-1868411:-1:exon
so has part: feature:1849332-1849551:-1:exon
so has part: feature:1819669-1822580:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1878513-1878623:-1:exon

position:1878513:-1
position: 1878513
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1869952-1870766:-1:exon

position:1869952:-1
position: 1869952
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1870766:-1
position: 1870766
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1866219-1868411:-1:exon

position:1866219:-1
position: 1866219
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1868411:-1
position: 1868411
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1849332-1849551:-1:exon

position:1849332:-1
position: 1849332
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1849551:-1
position: 1849551
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1819669-1822580:-1:exon

position:1822580:-1
position: 1822580
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

PCDH1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 87175
gene: PCDH1
product: protocadherin 1, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 ESTs, 11 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XM_030957485.1
SIO_010081: PCDH1
subclass of: SO_0000673
so part of: PCDH1
location: complement(join(1819669..1822580,1849332..1849551,1866219..1868411,1869952..1870766,1877238..1877568))
location: region:1819669-1877568:-1
so has part: feature:1877238-1877568:-1:exon
so has part: feature:1869952-1870766:-1:exon
so has part: feature:1866219-1868411:-1:exon
so has part: feature:1849332-1849551:-1:exon
so has part: feature:1819669-1822580:-1:exon

position:1877568:-1
position: 1877568
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1877238-1877568:-1:exon

position:1877238:-1
position: 1877238
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1869952-1870766:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1866219-1868411:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1849332-1849551:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1819669-1822580:-1:exon

PCDH1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 87175
gene: PCDH1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protocadherin-1 isoform X1
translation: METPRDQRAGARHGAQRRHHPTPLQCRMNPLASCLGLWLLCQLPALASGTRAVYKVQEEQPPNTLIGSLASDYGLPDMGHLYKLEVGAPYLRVDGKTGDIYTTETSIDRESLRECQHLLPGEPCFLEFEVSITNLNANSSPRLLEGQIEVLDINDNTPNFASPVLTLSIPENTNVGTLFPIPLAMDRDSGPNGVASYELMAGPEAQELFGLQVAEDQDEKQPQLIVMGNLDREQWDSYDLTIKVQDGGNPPRASSALLRITILDMNDNAPKFEKALYEAELSENSPVGHSVLQVKANDSDQGANAEIDYSFHQASDMVRRLLRLDRATGLITVQGPIDREDIGTLKFSVMAKDKGANPKSARTQVVVTIKDMNDNAPSIEIRGIGLVTHQDGMANISEDVPVETAVALVQVSDRDEGENAVVTCVVAGDVPFQLRQASETGSDSKKKYFLQTTTPLDYESVKEYTIEIVAVDSGNPPLSSTNSLKVQVMDVNDNAPVFSQSFTEVAFPENNEPDELVMEVSATDADSGSNAKLVYSLVTDPSSKGAFTIDPDSGEIRVKAVLDREQRERYEFLVVAEDKGSPSKQGTASVAINVMDRNDNDPKFMLSGYNFSVMENMPPLSPVGMVTVIDADKGENARIQLSVEQDNGDFVIQNGTGTILSSISFDREQQSTYTFRLKAVDGGDPPRSAYVGVTINVLDENDNAPFITSPSNATYKHILPHTSPGQQVSKVKAEDIDSGINAELIYSITGGNPFELFQISPQSGDITLEKEILRKHHGLHRLVVRVNDKGKPSRHGTALVHFYVNETLANRTLLDTLVGHSLDTPLDIDIAGDPEYERSKQRSNILFGVIAGIVAVTLVIVLVVLVRYCRQREAKSGYQAGKKETKDLYAPKQASKSGKSKNKVKKSKSPKPPKPTEDEEETGLQKSLKFNLMNDSVSDSPRIHLPLNYPPGSPDLGRHYRSNSPLPSIQLQPQSPSASKKHQVVQDLPATNTFVGTGDNNSTGSEQYSDYSYRTNPQKYTNKQLPHRRVTFSAASQAQDLQDPSQHSYYDSGLEESETPSSKSSSGPRIGPLALPEDHYERTTPDGSIGEMEHPENDLRPLPDVAMTGTCTRECTEFGHSDTCWMPGQSSPSRRPKNALKLSTFVPYQDRGSQEQVGNGSPRLSEERSTKMANLRLLPTYSAFSNSSHEPCKDSPMEEIPLTQTSDFQPATTPSAQTTKREIYL
SIO_010081: PCDH1
subclass of: SO_0000673
so part of: PCDH1
location: complement(join(1822195..1822580,1849332..1849551,1866219..1868411,1869952..1870766,1877238..1877301))
location: region:1822195-1877301:-1
so has part: feature:1877238-1877301:-1:exon
so has part: feature:1869952-1870766:-1:exon
so has part: feature:1866219-1868411:-1:exon
so has part: feature:1849332-1849551:-1:exon
so has part: feature:1822195-1822580:-1:exon

XP_030813345.1
type: Protein
SIO_000068: ncbiprotein

position:1822195:-1
position: 1822195
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1877301:-1
position: 1877301
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1877238-1877301:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1869952-1870766:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1866219-1868411:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1849332-1849551:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1822195-1822580:-1:exon

PCDH1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 87175
gene: PCDH1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protocadherin-1 isoform X2
translation: MNPLASCLGLWLLCQLPALASGTRAVYKVQEEQPPNTLIGSLASDYGLPDMGHLYKLEVGAPYLRVDGKTGDIYTTETSIDRESLRECQHLLPGEPCFLEFEVSITNLNANSSPRLLEGQIEVLDINDNTPNFASPVLTLSIPENTNVGTLFPIPLAMDRDSGPNGVASYELMAGPEAQELFGLQVAEDQDEKQPQLIVMGNLDREQWDSYDLTIKVQDGGNPPRASSALLRITILDMNDNAPKFEKALYEAELSENSPVGHSVLQVKANDSDQGANAEIDYSFHQASDMVRRLLRLDRATGLITVQGPIDREDIGTLKFSVMAKDKGANPKSARTQVVVTIKDMNDNAPSIEIRGIGLVTHQDGMANISEDVPVETAVALVQVSDRDEGENAVVTCVVAGDVPFQLRQASETGSDSKKKYFLQTTTPLDYESVKEYTIEIVAVDSGNPPLSSTNSLKVQVMDVNDNAPVFSQSFTEVAFPENNEPDELVMEVSATDADSGSNAKLVYSLVTDPSSKGAFTIDPDSGEIRVKAVLDREQRERYEFLVVAEDKGSPSKQGTASVAINVMDRNDNDPKFMLSGYNFSVMENMPPLSPVGMVTVIDADKGENARIQLSVEQDNGDFVIQNGTGTILSSISFDREQQSTYTFRLKAVDGGDPPRSAYVGVTINVLDENDNAPFITSPSNATYKHILPHTSPGQQVSKVKAEDIDSGINAELIYSITGGNPFELFQISPQSGDITLEKEILRKHHGLHRLVVRVNDKGKPSRHGTALVHFYVNETLANRTLLDTLVGHSLDTPLDIDIAGDPEYERSKQRSNILFGVIAGIVAVTLVIVLVVLVRYCRQREAKSGYQAGKKETKDLYAPKQASKSGKSKNKVKKSKSPKPPKPTEDEEETGLQKSLKFNLMNDSVSDSPRIHLPLNYPPGSPDLGRHYRSNSPLPSIQLQPQSPSASKKHQVVQDLPATNTFVGTGDNNSTGSEQYSDYSYRTNPQKYTNKQLPHRRVTFSAASQAQDLQDPSQHSYYDSGLEESETPSSKSSSGPRIGPLALPEDHYERTTPDGSIGEMEHPENDLRPLPDVAMTGTCTRECTEFGHSDTCWMPGQSSPSRRPKNALKLSTFVPYQDRGSQEQVGNGSPRLSEERSTKMANLRLLPTYSAFSNSSHEPCKDSPMEEIPLTQTSDFQPATTPSAQTTKREIYL
SIO_010081: PCDH1
subclass of: SO_0000673
so part of: PCDH1
location: complement(join(1822195..1822580,1849332..1849551,1866219..1868411,1869952..1870749))
location: region:1822195-1870749:-1
so has part: feature:1869952-1870749:-1:exon
so has part: feature:1866219-1868411:-1:exon
so has part: feature:1849332-1849551:-1:exon
so has part: feature:1822195-1822580:-1:exon

XP_030813346.1
type: Protein
SIO_000068: ncbiprotein

position:1870749:-1
position: 1870749
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1869952-1870749:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1866219-1868411:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1849332-1849551:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1822195-1822580:-1:exon

PCDH1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 87175
gene: PCDH1
product: protocadherin 1, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 ESTs, 6 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_030957487.1
SIO_010081: PCDH1
subclass of: SO_0000673
so part of: PCDH1
location: complement(join(1822456..1822580,1824717..1824759,1849332..1849551,1866219..1868411,1869952..1870766,1877238..1877568))
location: region:1822456-1877568:-1
so has part: feature:1877238-1877568:-1:exon
so has part: feature:1869952-1870766:-1:exon
so has part: feature:1866219-1868411:-1:exon
so has part: feature:1849332-1849551:-1:exon
so has part: feature:1824717-1824759:-1:exon
so has part: feature:1822456-1822580:-1:exon

position:1822456:-1
position: 1822456
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1877238-1877568:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1869952-1870766:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1866219-1868411:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1849332-1849551:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1824717-1824759:-1:exon

position:1824717:-1
position: 1824717
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1824759:-1
position: 1824759
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1822456-1822580:-1:exon

PCDH1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 87175
gene: PCDH1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protocadherin-1 isoform X3
translation: METPRDQRAGARHGAQRRHHPTPLQCRMNPLASCLGLWLLCQLPALASGTRAVYKVQEEQPPNTLIGSLASDYGLPDMGHLYKLEVGAPYLRVDGKTGDIYTTETSIDRESLRECQHLLPGEPCFLEFEVSITNLNANSSPRLLEGQIEVLDINDNTPNFASPVLTLSIPENTNVGTLFPIPLAMDRDSGPNGVASYELMAGPEAQELFGLQVAEDQDEKQPQLIVMGNLDREQWDSYDLTIKVQDGGNPPRASSALLRITILDMNDNAPKFEKALYEAELSENSPVGHSVLQVKANDSDQGANAEIDYSFHQASDMVRRLLRLDRATGLITVQGPIDREDIGTLKFSVMAKDKGANPKSARTQVVVTIKDMNDNAPSIEIRGIGLVTHQDGMANISEDVPVETAVALVQVSDRDEGENAVVTCVVAGDVPFQLRQASETGSDSKKKYFLQTTTPLDYESVKEYTIEIVAVDSGNPPLSSTNSLKVQVMDVNDNAPVFSQSFTEVAFPENNEPDELVMEVSATDADSGSNAKLVYSLVTDPSSKGAFTIDPDSGEIRVKAVLDREQRERYEFLVVAEDKGSPSKQGTASVAINVMDRNDNDPKFMLSGYNFSVMENMPPLSPVGMVTVIDADKGENARIQLSVEQDNGDFVIQNGTGTILSSISFDREQQSTYTFRLKAVDGGDPPRSAYVGVTINVLDENDNAPFITSPSNATYKHILPHTSPGQQVSKVKAEDIDSGINAELIYSITGGNPFELFQISPQSGDITLEKEILRKHHGLHRLVVRVNDKGKPSRHGTALVHFYVNETLANRTLLDTLVGHSLDTPLDIDIAGDPEYERSKQRSNILFGVIAGIVAVTLVIVLVVLVRYCRQREAKSGYQAGKKETKDLYAPKQASKSGKSKNKVKKSKSPKPPKPTEDEEETGLQKSLKFNLMNDSVSDSPRIHLPLNYPPGSPDLGRHYRSNSPLPSIQLQPQSPSASKKHQVVQDLPATNTFVGTGDNNSTGSEQYSDYSYRTNPQKYTNKQLPHRRVTFSAASQAQDLQDPSQHSYYDSGLEESETPSSKSSSGPRIGPLALPEDHYERTTPDGSIGEMEHPENESPERSRL
SIO_010081: PCDH1
subclass of: SO_0000673
so part of: PCDH1
location: complement(join(1824734..1824759,1849332..1849551,1866219..1868411,1869952..1870766,1877238..1877301))
location: region:1824734-1877301:-1
so has part: feature:1877238-1877301:-1:exon
so has part: feature:1869952-1870766:-1:exon
so has part: feature:1866219-1868411:-1:exon
so has part: feature:1849332-1849551:-1:exon
so has part: feature:1824734-1824759:-1:exon

XP_030813347.1
type: Protein
SIO_000068: ncbiprotein

position:1824734:-1
position: 1824734
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1877238-1877301:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1869952-1870766:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1866219-1868411:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1849332-1849551:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1824734-1824759:-1:exon

LOC115908706
type: Gene
subclass of: SO_0000704
RO_0002162: 87175
gene: LOC115908706
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 2028422..2035066
location: region:2028422-2035066:1
so has part: feature:2028422-2035066:1:exon
subclass of: SO_0000010

115908706
type: Gene
SIO_000068: ncbigene

position:2028422:1
position: 2028422
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2035066:1
position: 2035066
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2028422-2035066:1:exon

LOC115908706
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 87175
gene: LOC115908706
product: START domain-containing protein 10-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 22 Proteins, and 94% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_030957502.1
SIO_010081: LOC115908706
subclass of: SO_0000673
so part of: LOC115908706
location: join(2028422..2028586,2032380..2032527,2032618..2032721,2032813..2032930,2033598..2033650,2034598..2035066)
location: region:2028422-2035066:1
so has part: feature:2028422-2028586:1:exon
so has part: feature:2032380-2032527:1:exon
so has part: feature:2032618-2032721:1:exon
so has part: feature:2032813-2032930:1:exon
so has part: feature:2033598-2033650:1:exon
so has part: feature:2034598-2035066:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2028422-2028586:1:exon

position:2028586:1
position: 2028586
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2032380-2032527:1:exon

position:2032380:1
position: 2032380
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2032527:1
position: 2032527
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2032618-2032721:1:exon

position:2032618:1
position: 2032618
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2032721:1
position: 2032721
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:2032813-2032930:1:exon

position:2032813:1
position: 2032813
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2032930:1
position: 2032930
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:2033598-2033650:1:exon

position:2033598:1
position: 2033598
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2033650:1
position: 2033650
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:2034598-2035066:1:exon

position:2034598:1
position: 2034598
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC115908706
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 87175
gene: LOC115908706
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: START domain-containing protein 10-like
translation: MSRGGEMVYIPDDSDFSSFRDQCESLEGWHCRYNKAGVTVWSQGQEESCTVQKIKTRISCKDVPAETLYDVLHDTSYRSKWDSNMIETYDIGRLTVNADVGYYSWKCPSPLKNRDFVTLRSWLPLGNDYMIINYSVKHPKYPPRKDFVRAVSLQTGYLIKANGDGACILYYLTQVDPRGSLPKWVVNRVSQFVAPKAMKKIYKAGLKYPEWKRRHDPGYKPWVYPEQNTLPSVSLAELSVQHADSLENIDETGLPEEHLSTSDHEA
SIO_010081: LOC115908706
subclass of: SO_0000673
so part of: LOC115908706
location: join(2028422..2028586,2032380..2032527,2032618..2032721,2032813..2032930,2033598..2033650,2034598..2034810)
location: region:2028422-2034810:1
so has part: feature:2028422-2028586:1:exon
so has part: feature:2032380-2032527:1:exon
so has part: feature:2032618-2032721:1:exon
so has part: feature:2032813-2032930:1:exon
so has part: feature:2033598-2033650:1:exon
so has part: feature:2034598-2034810:1:exon

XP_030813362.1
type: Protein
SIO_000068: ncbiprotein

position:2034810:1
position: 2034810
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2028422-2028586:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2032380-2032527:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2032618-2032721:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2032813-2032930:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2033598-2033650:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2034598-2034810:1:exon

ARAP3
type: Gene
subclass of: SO_0000704
RO_0002162: 87175
gene: ARAP3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 2041056..2066184
location: region:2041056-2066184:1
so has part: feature:2041056-2066184:1:exon
subclass of: SO_0000010

115908808
type: Gene
SIO_000068: ncbigene

position:2041056:1
position: 2041056
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2066184:1
position: 2066184
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2041056-2066184:1:exon

ARAP3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 87175
gene: ARAP3
product: ArfGAP with RhoGAP domain, ankyrin repeat and PH domain 3
exception: unclassified transcription discrepancy
note: The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: inserted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 10 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XM_030957667.1
SIO_010081: ARAP3
subclass of: SO_0000673
so part of: ARAP3
location: join(2041056..2041206,2042845..2043913,2044501..2044556,2044784..2044857,2045639..2045709,2050513..2050782,2052169..2052238,2052659..2052779,2052979..2053166,2054622..2054728,2054831..2055030,2055179..2055264,2056090..2056272,2056484..2056646,2056942..2057073,2057146..2057302,2057430..2057532,2057735..2057933,2058015..2058078,2058892..2059055,2059198..2059410,2060203..2060308,2060783..2060930,2061087..2061155,2061446..2061520,2061629..2061743,2062416..2062544,2062714..2062847,2062989..2063071,2063279..2063314,2063765..2063828,2063922..2064059,2064339..2064377,2065011..2066184)
location: region:2041056-2066184:1
so has part: feature:2041056-2041206:1:exon
so has part: feature:2042845-2043913:1:exon
so has part: feature:2044501-2044556:1:exon
so has part: feature:2044784-2044857:1:exon
so has part: feature:2045639-2045709:1:exon
so has part: feature:2050513-2050782:1:exon
so has part: feature:2052169-2052238:1:exon
so has part: feature:2052659-2052779:1:exon
so has part: feature:2052979-2053166:1:exon
so has part: feature:2054622-2054728:1:exon
so has part: feature:2054831-2055030:1:exon
so has part: feature:2055179-2055264:1:exon
so has part: feature:2056090-2056272:1:exon
so has part: feature:2056484-2056646:1:exon
so has part: feature:2056942-2057073:1:exon
so has part: feature:2057146-2057302:1:exon
so has part: feature:2057430-2057532:1:exon
so has part: feature:2057735-2057933:1:exon
so has part: feature:2058015-2058078:1:exon
so has part: feature:2058892-2059055:1:exon
so has part: feature:2059198-2059410:1:exon
so has part: feature:2060203-2060308:1:exon
so has part: feature:2060783-2060930:1:exon
so has part: feature:2061087-2061155:1:exon
so has part: feature:2061446-2061520:1:exon
so has part: feature:2061629-2061743:1:exon
so has part: feature:2062416-2062544:1:exon
so has part: feature:2062714-2062847:1:exon
so has part: feature:2062989-2063071:1:exon
so has part: feature:2063279-2063314:1:exon
so has part: feature:2063765-2063828:1:exon
so has part: feature:2063922-2064059:1:exon
so has part: feature:2064339-2064377:1:exon
so has part: feature:2065011-2066184:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2041056-2041206:1:exon

position:2041206:1
position: 2041206
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2042845-2043913:1:exon

position:2042845:1
position: 2042845
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2043913:1
position: 2043913
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2044501-2044556:1:exon

position:2044501:1
position: 2044501
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2044556:1
position: 2044556
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:2044784-2044857:1:exon

position:2044784:1
position: 2044784
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2044857:1
position: 2044857
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:2045639-2045709:1:exon

position:2045639:1
position: 2045639
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2045709:1
position: 2045709
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:2050513-2050782:1:exon

position:2050513:1
position: 2050513
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2050782:1
position: 2050782
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:2052169-2052238:1:exon

position:2052169:1
position: 2052169
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2052238:1
position: 2052238
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:2052659-2052779:1:exon

position:2052659:1
position: 2052659
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2052779:1
position: 2052779
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:2052979-2053166:1:exon

position:2052979:1
position: 2052979
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2053166:1
position: 2053166
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:2054622-2054728:1:exon

position:2054622:1
position: 2054622
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2054728:1
position: 2054728
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:2054831-2055030:1:exon

position:2054831:1
position: 2054831
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2055030:1
position: 2055030
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:2055179-2055264:1:exon

position:2055179:1
position: 2055179
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2055264:1
position: 2055264
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:2056090-2056272:1:exon

position:2056090:1
position: 2056090
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2056272:1
position: 2056272
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:2056484-2056646:1:exon

position:2056484:1
position: 2056484
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2056646:1
position: 2056646
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:2056942-2057073:1:exon

position:2056942:1
position: 2056942
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2057073:1
position: 2057073
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:2057146-2057302:1:exon

position:2057146:1
position: 2057146
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2057302:1
position: 2057302
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:2057430-2057532:1:exon

position:2057430:1
position: 2057430
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2057532:1
position: 2057532
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:2057735-2057933:1:exon

position:2057735:1
position: 2057735
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2057933:1
position: 2057933
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:2058015-2058078:1:exon

position:2058015:1
position: 2058015
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2058078:1
position: 2058078
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:2058892-2059055:1:exon

position:2058892:1
position: 2058892
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2059055:1
position: 2059055
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:2059198-2059410:1:exon

position:2059198:1
position: 2059198
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2059410:1
position: 2059410
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 22
SIO_000628: feature:2060203-2060308:1:exon

position:2060203:1
position: 2060203
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2060308:1
position: 2060308
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 23
SIO_000628: feature:2060783-2060930:1:exon

position:2060783:1
position: 2060783
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2060930:1
position: 2060930
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 24
SIO_000628: feature:2061087-2061155:1:exon

position:2061087:1
position: 2061087
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2061155:1
position: 2061155
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 25
SIO_000628: feature:2061446-2061520:1:exon

position:2061446:1
position: 2061446
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2061520:1
position: 2061520
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 26
SIO_000628: feature:2061629-2061743:1:exon

position:2061629:1
position: 2061629
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2061743:1
position: 2061743
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 27
SIO_000628: feature:2062416-2062544:1:exon

position:2062416:1
position: 2062416
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2062544:1
position: 2062544
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 28
SIO_000628: feature:2062714-2062847:1:exon

position:2062714:1
position: 2062714
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2062847:1
position: 2062847
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 29
SIO_000628: feature:2062989-2063071:1:exon

position:2062989:1
position: 2062989
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2063071:1
position: 2063071
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 30
SIO_000628: feature:2063279-2063314:1:exon

position:2063279:1
position: 2063279
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2063314:1
position: 2063314
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 31
SIO_000628: feature:2063765-2063828:1:exon

position:2063765:1
position: 2063765
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2063828:1
position: 2063828
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 32
SIO_000628: feature:2063922-2064059:1:exon

position:2063922:1
position: 2063922
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2064059:1
position: 2064059
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 33
SIO_000628: feature:2064339-2064377:1:exon

position:2064339:1
position: 2064339
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2064377:1
position: 2064377
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 34
SIO_000628: feature:2065011-2066184:1:exon

position:2065011:1
position: 2065011
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

ARAP3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 87175
gene: ARAP3
exception: unclassified translation discrepancy
note: The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: inserted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: LOW QUALITY PROTEIN: arf-GAP with Rho-GAP domain, ANK repeat and PH domain-containing protein 3
translation: MSSPCGPDSDIADWLASIHLERYRDVFKQHGYHVARDATSLDSHHLQQIGVTATGHRKRILTLAQQTRLLSQARGRAAAGDSHCRGTEVLDAPQEGKDAMRAEPGGTSDAFGTQPRVTVPSRAPPGDKDAAPPASKPVPKPRTVFPRSKAEQGSVPVAPARXTVPAHGPGSERAPSAFVVLEGFVPGESCTDLESPEAAPGAAVTMGAIASRLRGRDSAREETRPAPSHGQTLETAENRQTCPPSVPSVPPRHGHRALAAEPSPGSAQQAPPGRREPSPCPRAASCEPGSGQPRLQMVSNVIYEGLERPAAAAEEPGGEEGPRGEGVPPPPAPCPQEQPRPEDSPGWPGALPPIPQRPTGKPEGNDPPITPYSETIFGHVGLPRETKAVGSSSEQSYEAVSELELEREGCRTSSECSSEGRSEDEEGRSRLIERIAHSDTEGYSMVEVPRAQGSPFSLPAHLYPDELLDDLTISPYASFTSLCEPRPTMLSGWLDKLSPQGNYVFQRRYVRFDGKNLMYSSSEKEPYPKGVIPLSVIEMARSTKDNKFQVITSHRIFVFRAENEAQRNEWCSTLQKKVMEQRLVGSRPRPANTAHCQKSGTLELKGHKSKVFAALSLPEMWLYKSEQFFKMGIAMCFIEMRGSTIREAKSRSFELITPSKTFSFMAESEREKREWMEALQEAIAEMLYDYEVAEKIWSNKANKYCADCWAQSPDWASINLCVVICKQCAGQHRSLGSNISKVQSLKLDTSVWSNEIVQLFIVLGNDRANRFWAARLPASEAITPESGAEQRREFIARKYREGRYRLPHPQHGTQEEVLQALCSAVAGPALLKTILQFFSSSEAALASDPAASEAAPGADLWWGPESKRPRNLSGSPRAQDPGPEGVYNEITQPVTHSGYLYRATAPPKLPGARKSKEDFQRTWCSLERALLFFETEKCTEPLGRIDSGDLLSLGVNRAHQALTSPGPTERFRFTLELFLTGEKVQQLGTDGPETLQAWASAIGKWFTPVSCHCLLGYEFQRVGQLRYKCMLNPERWQRAFFILQKSHLFICPAEEDGAEDSINLRRLQELSLVPPTDTPEKKELLVLVEMGRTFYLQGLSRADSAAWYSDIQASAGGRGNALRDQQLSRGDIPIIVDSCIAFITQYGLRHEGIYRKNGAKSRIKVLMEEFRRDARNVKLRISDNFIEDVTDVLKRFFRELEDPIFTLELHPQWKEAAEISSKPQRLERYKELIHRLPRLNHKTLAALIGHLYRVQKCADLNQMSTKNLSLLFAPSLFQTDGKGEHEVKVMEDLIDNYVSIFNIDEDQVSQMDLENSLITTWKDTQLSQAGDLIIEVYLEQKVSDCCVTLKVSPTMTAEELTNQVLEMRNVPASLDIWLTFEALENGELERPLHPKEKVLEQALQWCKLPEPSSAYLLVRKVPIGEGSCLFTGAKRETPKCGLLKCREEPPKLLGNKFQERYFVIRDRRLLLLKEKRSAKPEREWPLDAAKVYMGIRKKLKPPAQWGFTLTLDKQQLYLVCSGQAELWDWTTSILKAQHDDLRPVVLRRRSSSDLAKQKFGTMPLVPLHGDSTDATMLSANQTLRRLHTRRTLSMFFPMKIHQDSLEEQQEKEADTDPVYEEVGNFPELAALDLGQGLLAELAAVPPVDRSKKPSPFPEEPPGTALRSSLPANPAQRVTGPSVTKAVSLERGLNLESSKAPSPGLRPTKTSSLERNMEPSLVLGRDWEQAATPGSSPTAETSLELPRKRSLQPPSPISDKLMQELSSVILRKSDGQPPGPGQPVT
SIO_010081: ARAP3
subclass of: SO_0000673
so part of: ARAP3
location: join(2042884..2043913,2044501..2044556,2044784..2044857,2045639..2045709,2050513..2050782,2052169..2052238,2052659..2052779,2052979..2053166,2054622..2054728,2054831..2055030,2055179..2055264,2056090..2056272,2056484..2056646,2056942..2057073,2057146..2057302,2057430..2057532,2057735..2057933,2058015..2058078,2058892..2059055,2059198..2059410,2060203..2060308,2060783..2060930,2061087..2061155,2061446..2061520,2061629..2061743,2062416..2062544,2062714..2062847,2062989..2063071,2063279..2063314,2063765..2063828,2063922..2064059,2064339..2064377,2065011..2065577)
location: region:2042884-2065577:1
so has part: feature:2042884-2043913:1:exon
so has part: feature:2044501-2044556:1:exon
so has part: feature:2044784-2044857:1:exon
so has part: feature:2045639-2045709:1:exon
so has part: feature:2050513-2050782:1:exon
so has part: feature:2052169-2052238:1:exon
so has part: feature:2052659-2052779:1:exon
so has part: feature:2052979-2053166:1:exon
so has part: feature:2054622-2054728:1:exon
so has part: feature:2054831-2055030:1:exon
so has part: feature:2055179-2055264:1:exon
so has part: feature:2056090-2056272:1:exon
so has part: feature:2056484-2056646:1:exon
so has part: feature:2056942-2057073:1:exon
so has part: feature:2057146-2057302:1:exon
so has part: feature:2057430-2057532:1:exon
so has part: feature:2057735-2057933:1:exon
so has part: feature:2058015-2058078:1:exon
so has part: feature:2058892-2059055:1:exon
so has part: feature:2059198-2059410:1:exon
so has part: feature:2060203-2060308:1:exon
so has part: feature:2060783-2060930:1:exon
so has part: feature:2061087-2061155:1:exon
so has part: feature:2061446-2061520:1:exon
so has part: feature:2061629-2061743:1:exon
so has part: feature:2062416-2062544:1:exon
so has part: feature:2062714-2062847:1:exon
so has part: feature:2062989-2063071:1:exon
so has part: feature:2063279-2063314:1:exon
so has part: feature:2063765-2063828:1:exon
so has part: feature:2063922-2064059:1:exon
so has part: feature:2064339-2064377:1:exon
so has part: feature:2065011-2065577:1:exon

XP_030813527.1
type: Protein
SIO_000068: ncbiprotein

position:2042884:1
position: 2042884
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2065577:1
position: 2065577
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2042884-2043913:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2044501-2044556:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2044784-2044857:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2045639-2045709:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2050513-2050782:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2052169-2052238:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2052659-2052779:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2052979-2053166:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2054622-2054728:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2054831-2055030:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:2055179-2055264:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:2056090-2056272:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:2056484-2056646:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:2056942-2057073:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:2057146-2057302:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:2057430-2057532:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:2057735-2057933:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:2058015-2058078:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:2058892-2059055:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:2059198-2059410:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:2060203-2060308:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:2060783-2060930:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:2061087-2061155:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:2061446-2061520:1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:2061629-2061743:1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:2062416-2062544:1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:2062714-2062847:1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:2062989-2063071:1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:2063279-2063314:1:exon

urn:…
SIO_000300: 30
SIO_000628: feature:2063765-2063828:1:exon

urn:…
SIO_000300: 31
SIO_000628: feature:2063922-2064059:1:exon

urn:…
SIO_000300: 32
SIO_000628: feature:2064339-2064377:1:exon

urn:…
SIO_000300: 33
SIO_000628: feature:2065011-2065577:1:exon

LOC115908820
type: Gene
subclass of: SO_0000704
RO_0002162: 87175
gene: LOC115908820
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(2066124..2068448)
location: region:2066124-2068448:-1
so has part: feature:2066124-2068448:-1:exon
subclass of: SO_0000010

115908820
type: Gene
SIO_000068: ncbigene

position:2066124:-1
position: 2066124
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2068448:-1
position: 2068448
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2066124-2068448:-1:exon

LOC115908820
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 87175
gene: LOC115908820
product: proteinase-activated receptor 3-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins
transcript id: XM_030957684.1
SIO_010081: LOC115908820
subclass of: SO_0000673
so part of: LOC115908820
location: complement(join(2066124..2066177,2066467..2067482,2068340..2068448))
location: region:2066124-2068448:-1
so has part: feature:2068340-2068448:-1:exon
so has part: feature:2066467-2067482:-1:exon
so has part: feature:2066124-2066177:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2068340-2068448:-1:exon

position:2068340:-1
position: 2068340
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2066467-2067482:-1:exon

position:2066467:-1
position: 2066467
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2067482:-1
position: 2067482
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2066124-2066177:-1:exon

position:2066177:-1
position: 2066177
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC115908820
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 87175
gene: LOC115908820
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: proteinase-activated receptor 3-like
translation: MSWRGLSPASAAACVTILLSCAWLGSAAHPSSGECLGRALLPLTPQEKNVCSQASEEDFLNSTLSTRLLPALYSLVLLVGLPANALACWVLATNFRRCSSAVFLLNLAGADLLFVLLLPFKISYHILGNHWPFGDYPCRAMVAFFYGNMYSSILFLTCIGLERYISVAHPFLWKGSSWTRGKVGISVGIWLLVGLGMSPLLLRSHTRDISSLNITTCHDVLEKETQRFFGHYFLFLVGLGFGLPFVLMIISYSCILARLLAKGGSHGQVIRVLALVLLVFILCFTPSNVLLFIHHLLEPTGCNNGTYISYALALVLSACNNCFDPFIYFYVSRDFRGWLQDAGGRCLRGLEASSGRSTEKTALPLRSSEQSQGCQKRYKHPRRGGAALHRWD
SIO_010081: LOC115908820
subclass of: SO_0000673
so part of: LOC115908820
location: complement(join(2066124..2066177,2066467..2067482,2068340..2068448))
location: region:2066124-2068448:-1
so has part: feature:2068340-2068448:-1:exon
so has part: feature:2066467-2067482:-1:exon
so has part: feature:2066124-2066177:-1:exon

XP_030813544.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:2068340-2068448:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2066467-2067482:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2066124-2066177:-1:exon

FCHSD1
type: Gene
subclass of: SO_0000704
RO_0002162: 87175
gene: FCHSD1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 2070375..2076258
location: region:2070375-2076258:1
so has part: feature:2070375-2076258:1:exon
subclass of: SO_0000010

115908612
type: Gene
SIO_000068: ncbigene

position:2070375:1
position: 2070375
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2076258:1
position: 2076258
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2070375-2076258:1:exon

FCHSD1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 87175
gene: FCHSD1
product: FCH and double SH3 domains 1, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
transcript id: XM_030957347.1
SIO_010081: FCHSD1
subclass of: SO_0000673
so part of: FCHSD1
location: join(2070375..2070498,2070755..2070852,2071428..2071473,2072318..2072391,2072620..2072764,2072839..2072975,2073049..2073112,2073196..2073324,2073500..2073622,2073703..2073981,2074084..2074188,2074392..2074622,2074709..2074792,2074900..2075056,2075139..2075344,2075441..2075531,2075611..2075678,2075836..2076258)
location: region:2070375-2076258:1
so has part: feature:2070375-2070498:1:exon
so has part: feature:2070755-2070852:1:exon
so has part: feature:2071428-2071473:1:exon
so has part: feature:2072318-2072391:1:exon
so has part: feature:2072620-2072764:1:exon
so has part: feature:2072839-2072975:1:exon
so has part: feature:2073049-2073112:1:exon
so has part: feature:2073196-2073324:1:exon
so has part: feature:2073500-2073622:1:exon
so has part: feature:2073703-2073981:1:exon
so has part: feature:2074084-2074188:1:exon
so has part: feature:2074392-2074622:1:exon
so has part: feature:2074709-2074792:1:exon
so has part: feature:2074900-2075056:1:exon
so has part: feature:2075139-2075344:1:exon
so has part: feature:2075441-2075531:1:exon
so has part: feature:2075611-2075678:1:exon
so has part: feature:2075836-2076258:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2070375-2070498:1:exon

position:2070498:1
position: 2070498
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2070755-2070852:1:exon

position:2070755:1
position: 2070755
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2070852:1
position: 2070852
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2071428-2071473:1:exon

position:2071428:1
position: 2071428
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2071473:1
position: 2071473
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:2072318-2072391:1:exon

position:2072318:1
position: 2072318
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2072391:1
position: 2072391
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:2072620-2072764:1:exon

position:2072620:1
position: 2072620
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2072764:1
position: 2072764
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:2072839-2072975:1:exon

position:2072839:1
position: 2072839
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2072975:1
position: 2072975
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:2073049-2073112:1:exon

position:2073049:1
position: 2073049
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2073112:1
position: 2073112
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:2073196-2073324:1:exon

position:2073196:1
position: 2073196
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2073324:1
position: 2073324
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:2073500-2073622:1:exon

position:2073500:1
position: 2073500
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2073622:1
position: 2073622
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:2073703-2073981:1:exon

position:2073703:1
position: 2073703
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2073981:1
position: 2073981
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:2074084-2074188:1:exon

position:2074084:1
position: 2074084
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2074188:1
position: 2074188
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:2074392-2074622:1:exon

position:2074392:1
position: 2074392
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2074622:1
position: 2074622
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:2074709-2074792:1:exon

position:2074709:1
position: 2074709
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2074792:1
position: 2074792
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:2074900-2075056:1:exon

position:2074900:1
position: 2074900
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2075056:1
position: 2075056
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:2075139-2075344:1:exon

position:2075139:1
position: 2075139
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2075344:1
position: 2075344
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:2075441-2075531:1:exon

position:2075441:1
position: 2075441
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2075531:1
position: 2075531
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:2075611-2075678:1:exon

position:2075611:1
position: 2075611
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2075678:1
position: 2075678
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:2075836-2076258:1:exon

position:2075836:1
position: 2075836
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

FCHSD1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 87175
gene: FCHSD1
product: FCH and double SH3 domains 1, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
transcript id: XM_030957348.1
SIO_010081: FCHSD1
subclass of: SO_0000673
so part of: FCHSD1
location: join(2070375..2070498,2070755..2070852,2071428..2071473,2072318..2072391,2072620..2072764,2072839..2072975,2073049..2073112,2073196..2073324,2073500..2073622,2073703..2073798,2073874..2073981,2074084..2074188,2074392..2074622,2074709..2074792,2074900..2075056,2075139..2075344,2075441..2075531,2075611..2075678,2075836..2076258)
location: region:2070375-2076258:1
so has part: feature:2070375-2070498:1:exon
so has part: feature:2070755-2070852:1:exon
so has part: feature:2071428-2071473:1:exon
so has part: feature:2072318-2072391:1:exon
so has part: feature:2072620-2072764:1:exon
so has part: feature:2072839-2072975:1:exon
so has part: feature:2073049-2073112:1:exon
so has part: feature:2073196-2073324:1:exon
so has part: feature:2073500-2073622:1:exon
so has part: feature:2073703-2073798:1:exon
so has part: feature:2073874-2073981:1:exon
so has part: feature:2074084-2074188:1:exon
so has part: feature:2074392-2074622:1:exon
so has part: feature:2074709-2074792:1:exon
so has part: feature:2074900-2075056:1:exon
so has part: feature:2075139-2075344:1:exon
so has part: feature:2075441-2075531:1:exon
so has part: feature:2075611-2075678:1:exon
so has part: feature:2075836-2076258:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2070375-2070498:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2070755-2070852:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2071428-2071473:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2072318-2072391:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2072620-2072764:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2072839-2072975:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2073049-2073112:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2073196-2073324:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2073500-2073622:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2073703-2073798:1:exon

position:2073798:1
position: 2073798
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:2073874-2073981:1:exon

position:2073874:1
position: 2073874
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:2074084-2074188:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:2074392-2074622:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:2074709-2074792:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:2074900-2075056:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:2075139-2075344:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:2075441-2075531:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:2075611-2075678:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:2075836-2076258:1:exon

FCHSD1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 87175
gene: FCHSD1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: F-BAR and double SH3 domains protein 1 isoform X1
translation: MQPPPRKVKLTQELRVHLLEQLSGLQSKQQRDAELLEDIRSYSKQRATIDREYGQALQRLASQFVKRDWQRGRGEAGDSRSVAAVWKGVIEGTAHAGQVRVTASESYRTLAAEAAPSARLCKERTLKKGIERLQKAQVELLETVKELDKAKKQLSHLRRSSEVAKDKAADVEARLRKSDRRIFHTKASLQKLSAKFSARLAEHSRQLAGVQNEYSFALVAASAHLEHYQRVELPAAMQALDGDLYERLREHLSAASRTEVETCRATRDWFQGVVEASARVCREQDLLLFLQDHPAFSLAPEQRFQLTGLEEVSGGGRYSKVGSAQPPPCHRRVLAQVCLLPPADDGASLEKEARRWATRVAREQKNRAHSEEVLQRLEARRQQGLEAEAAAVERQMEEVRENIRKAEVSRVKAEARLALLRAAGLDVDAWLAGAMGGTGEETPTGLDPAEFDDYEDSDEPDEDDEPGPAARTYPYTCRVIFGYQGRQADELSISQGEELEIIEDGDAEEWVKARNKAGQVGYVPEKYLLSLGCDSGAGLGPPGPSALHRQLSSIMAAELVLEPGAWLVRALYDYEGQSPEELSFPEGAIIRVLPRAAGEVDDGFWTGDFDGRVGVFPSLVVEELTGAREAAGQELPSPSPPPFSPPGLAPGASLVPSSETALGGCRQDGTGSGQSSPDLAATRLRPLRAPPPPPGRAPEPDPELHFS
SIO_010081: FCHSD1
subclass of: SO_0000673
so part of: FCHSD1
location: join(2070478..2070498,2070755..2070852,2071428..2071473,2072318..2072391,2072620..2072764,2072839..2072975,2073049..2073112,2073196..2073324,2073500..2073622,2073703..2073981,2074084..2074188,2074392..2074622,2074709..2074792,2074900..2075056,2075139..2075344,2075441..2075531,2075611..2075678,2075836..2075901)
location: region:2070478-2075901:1
so has part: feature:2070478-2070498:1:exon
so has part: feature:2070755-2070852:1:exon
so has part: feature:2071428-2071473:1:exon
so has part: feature:2072318-2072391:1:exon
so has part: feature:2072620-2072764:1:exon
so has part: feature:2072839-2072975:1:exon
so has part: feature:2073049-2073112:1:exon
so has part: feature:2073196-2073324:1:exon
so has part: feature:2073500-2073622:1:exon
so has part: feature:2073703-2073981:1:exon
so has part: feature:2074084-2074188:1:exon
so has part: feature:2074392-2074622:1:exon
so has part: feature:2074709-2074792:1:exon
so has part: feature:2074900-2075056:1:exon
so has part: feature:2075139-2075344:1:exon
so has part: feature:2075441-2075531:1:exon
so has part: feature:2075611-2075678:1:exon
so has part: feature:2075836-2075901:1:exon

XP_030813207.1
type: Protein
SIO_000068: ncbiprotein

position:2070478:1
position: 2070478
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2075901:1
position: 2075901
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2070478-2070498:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2070755-2070852:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2071428-2071473:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2072318-2072391:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2072620-2072764:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2072839-2072975:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2073049-2073112:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2073196-2073324:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2073500-2073622:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2073703-2073981:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:2074084-2074188:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:2074392-2074622:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:2074709-2074792:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:2074900-2075056:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:2075139-2075344:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:2075441-2075531:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:2075611-2075678:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:2075836-2075901:1:exon

FCHSD1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 87175
gene: FCHSD1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: F-BAR and double SH3 domains protein 1 isoform X2
translation: MQPPPRKVKLTQELRVHLLEQLSGLQSKQQRDAELLEDIRSYSKQRATIDREYGQALQRLASQFVKRDWQRGRGEAGDSRSVAAVWKGVIEGTAHAGQVRVTASESYRTLAAEAAPSARLCKERTLKKGIERLQKAQVELLETVKELDKAKKQLSHLRRSSEVAKDKAADVEARLRKSDRRIFHTKASLQKLSAKFSARLAEHSRQLAGVQNEYSFALVAASAHLEHYQRVELPAAMQALDGDLYERLREHLSAASRTEVETCRATRDWFQGVVEASARVCREQDLLLFLQDHPAFSLAPEQRFQLTGLEEVCLLPPADDGASLEKEARRWATRVAREQKNRAHSEEVLQRLEARRQQGLEAEAAAVERQMEEVRENIRKAEVSRVKAEARLALLRAAGLDVDAWLAGAMGGTGEETPTGLDPAEFDDYEDSDEPDEDDEPGPAARTYPYTCRVIFGYQGRQADELSISQGEELEIIEDGDAEEWVKARNKAGQVGYVPEKYLLSLGCDSGAGLGPPGPSALHRQLSSIMAAELVLEPGAWLVRALYDYEGQSPEELSFPEGAIIRVLPRAAGEVDDGFWTGDFDGRVGVFPSLVVEELTGAREAAGQELPSPSPPPFSPPGLAPGASLVPSSETALGGCRQDGTGSGQSSPDLAATRLRPLRAPPPPPGRAPEPDPELHFS
SIO_010081: FCHSD1
subclass of: SO_0000673
so part of: FCHSD1
location: join(2070478..2070498,2070755..2070852,2071428..2071473,2072318..2072391,2072620..2072764,2072839..2072975,2073049..2073112,2073196..2073324,2073500..2073622,2073703..2073798,2073874..2073981,2074084..2074188,2074392..2074622,2074709..2074792,2074900..2075056,2075139..2075344,2075441..2075531,2075611..2075678,2075836..2075901)
location: region:2070478-2075901:1
so has part: feature:2070478-2070498:1:exon
so has part: feature:2070755-2070852:1:exon
so has part: feature:2071428-2071473:1:exon
so has part: feature:2072318-2072391:1:exon
so has part: feature:2072620-2072764:1:exon
so has part: feature:2072839-2072975:1:exon
so has part: feature:2073049-2073112:1:exon
so has part: feature:2073196-2073324:1:exon
so has part: feature:2073500-2073622:1:exon
so has part: feature:2073703-2073798:1:exon
so has part: feature:2073874-2073981:1:exon
so has part: feature:2074084-2074188:1:exon
so has part: feature:2074392-2074622:1:exon
so has part: feature:2074709-2074792:1:exon
so has part: feature:2074900-2075056:1:exon
so has part: feature:2075139-2075344:1:exon
so has part: feature:2075441-2075531:1:exon
so has part: feature:2075611-2075678:1:exon
so has part: feature:2075836-2075901:1:exon

XP_030813208.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:2070478-2070498:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2070755-2070852:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2071428-2071473:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2072318-2072391:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2072620-2072764:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2072839-2072975:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2073049-2073112:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2073196-2073324:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2073500-2073622:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2073703-2073798:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:2073874-2073981:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:2074084-2074188:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:2074392-2074622:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:2074709-2074792:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:2074900-2075056:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:2075139-2075344:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:2075441-2075531:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:2075611-2075678:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:2075836-2075901:1:exon

RELL2
type: Gene
subclass of: SO_0000704
RO_0002162: 87175
gene: RELL2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(2076277..2091872)
location: region:2076277-2091872:-1
so has part: feature:2076277-2091872:-1:exon
subclass of: SO_0000010

115908613
type: Gene
SIO_000068: ncbigene

position:2076277:-1
position: 2076277
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2091872:-1
position: 2091872
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2076277-2091872:-1:exon

RELL2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 87175
gene: RELL2
product: RELT like 2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_030957349.1
SIO_010081: RELL2
subclass of: SO_0000673
so part of: RELL2
location: complement(join(2076277..2076930,2077180..2077213,2078717..2079329,2084325..2084513,2084767..2084833,2084929..2084991,2086827..2087040,2090960..2091872))
location: region:2076277-2091872:-1
so has part: feature:2090960-2091872:-1:exon
so has part: feature:2086827-2087040:-1:exon
so has part: feature:2084929-2084991:-1:exon
so has part: feature:2084767-2084833:-1:exon
so has part: feature:2084325-2084513:-1:exon
so has part: feature:2078717-2079329:-1:exon
so has part: feature:2077180-2077213:-1:exon
so has part: feature:2076277-2076930:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2090960-2091872:-1:exon

position:2090960:-1
position: 2090960
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2086827-2087040:-1:exon

position:2086827:-1
position: 2086827
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2087040:-1
position: 2087040
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2084929-2084991:-1:exon

position:2084929:-1
position: 2084929
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2084991:-1
position: 2084991
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:2084767-2084833:-1:exon

position:2084767:-1
position: 2084767
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2084833:-1
position: 2084833
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:2084325-2084513:-1:exon

position:2084325:-1
position: 2084325
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2084513:-1
position: 2084513
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:2078717-2079329:-1:exon

position:2078717:-1
position: 2078717
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2079329:-1
position: 2079329
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:2077180-2077213:-1:exon

position:2077180:-1
position: 2077180
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2077213:-1
position: 2077213
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:2076277-2076930:-1:exon

position:2076930:-1
position: 2076930
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

RELL2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 87175
gene: RELL2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: RELT-like protein 2
translation: MEQLCRCEENFWAEHRSEDPRRSLDLGTPACLAAMWTGGGARAADATKGRGPIVCGVTFAPVAVEEKQEKSGQEIRMSDYHNPHYGESEPQHGITVVFLLVLVFFIMGLVGFLICHVLKKKGYRCRTFRDELDPDDKDEVEELDDDEAEKNDDTVEKIVRCIIQNEANVEALKEMLGENEPDVPVPVPSLYHHSSSQDGGPPHHHTVHLGSTHAPCIHCSRKKRHPLQRQGRSKEGKSRMHPGETTVFSVGRFRVTHIGKKPSLPEQPDGAVPVGSRLPSTEELERSSELLNGTVPTAGLQNGAVHTGTQSARSAEQSLSASPAANTPASSSTRDSRRAGTAGSGTVGSGTVGPAVGPGPVGSNRAGSLPGAGSAPGSSSRQRRLLSLPVLGASSPNIPGELAREGAGICLEEMGLASADEVSDIHGSLSLQEQAEELGRDESSRKQSGGEDGKQQEPSAAEQDRV
SIO_010081: RELL2
subclass of: SO_0000673
so part of: RELL2
location: complement(join(2077181..2077213,2078717..2079329,2084325..2084513,2084767..2084833,2084929..2084991,2086827..2087040,2090960..2091181))
location: region:2077181-2091181:-1
so has part: feature:2090960-2091181:-1:exon
so has part: feature:2086827-2087040:-1:exon
so has part: feature:2084929-2084991:-1:exon
so has part: feature:2084767-2084833:-1:exon
so has part: feature:2084325-2084513:-1:exon
so has part: feature:2078717-2079329:-1:exon
so has part: feature:2077181-2077213:-1:exon

XP_030813209.1
type: Protein
SIO_000068: ncbiprotein

position:2077181:-1
position: 2077181
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2091181:-1
position: 2091181
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2090960-2091181:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2086827-2087040:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2084929-2084991:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2084767-2084833:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2084325-2084513:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2078717-2079329:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2077181-2077213:-1:exon

HDAC3
type: Gene
subclass of: SO_0000704
RO_0002162: 87175
gene: HDAC3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 2093954..2104618
location: region:2093954-2104618:1
so has part: feature:2093954-2104618:1:exon
subclass of: SO_0000010

115908791
type: Gene
SIO_000068: ncbigene

position:2093954:1
position: 2093954
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2104618:1
position: 2104618
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2093954-2104618:1:exon

HDAC3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 87175
gene: HDAC3
product: histone deacetylase 3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 mRNAs, 3 ESTs, 36 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XM_030957637.1
SIO_010081: HDAC3
subclass of: SO_0000673
so part of: HDAC3
location: join(2093954..2094063,2094318..2094400,2096928..2097070,2098711..2098792,2098967..2099023,2099116..2099171,2100405..2100538,2100787..2100867,2100962..2101035,2101169..2101233,2101967..2102056,2102159..2102217,2102659..2102738,2103030..2103187,2103452..2104618)
location: region:2093954-2104618:1
so has part: feature:2093954-2094063:1:exon
so has part: feature:2094318-2094400:1:exon
so has part: feature:2096928-2097070:1:exon
so has part: feature:2098711-2098792:1:exon
so has part: feature:2098967-2099023:1:exon
so has part: feature:2099116-2099171:1:exon
so has part: feature:2100405-2100538:1:exon
so has part: feature:2100787-2100867:1:exon
so has part: feature:2100962-2101035:1:exon
so has part: feature:2101169-2101233:1:exon
so has part: feature:2101967-2102056:1:exon
so has part: feature:2102159-2102217:1:exon
so has part: feature:2102659-2102738:1:exon
so has part: feature:2103030-2103187:1:exon
so has part: feature:2103452-2104618:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2093954-2094063:1:exon

position:2094063:1
position: 2094063
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2094318-2094400:1:exon

position:2094318:1
position: 2094318
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2094400:1
position: 2094400
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2096928-2097070:1:exon

position:2096928:1
position: 2096928
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2097070:1
position: 2097070
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:2098711-2098792:1:exon

position:2098711:1
position: 2098711
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2098792:1
position: 2098792
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:2098967-2099023:1:exon

position:2098967:1
position: 2098967
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2099023:1
position: 2099023
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:2099116-2099171:1:exon

position:2099116:1
position: 2099116
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2099171:1
position: 2099171
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:2100405-2100538:1:exon

position:2100405:1
position: 2100405
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2100538:1
position: 2100538
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:2100787-2100867:1:exon

position:2100787:1
position: 2100787
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2100867:1
position: 2100867
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:2100962-2101035:1:exon

position:2100962:1
position: 2100962
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2101035:1
position: 2101035
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:2101169-2101233:1:exon

position:2101169:1
position: 2101169
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2101233:1
position: 2101233
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:2101967-2102056:1:exon

position:2101967:1
position: 2101967
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2102056:1
position: 2102056
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:2102159-2102217:1:exon

position:2102159:1
position: 2102159
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2102217:1
position: 2102217
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:2102659-2102738:1:exon

position:2102659:1
position: 2102659
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2102738:1
position: 2102738
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:2103030-2103187:1:exon

position:2103030:1
position: 2103030
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2103187:1
position: 2103187
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:2103452-2104618:1:exon

position:2103452:1
position: 2103452
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

HDAC3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 87175
gene: HDAC3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: histone deacetylase 3
translation: MAKTVAYFYDPDVGNFHYGAGHPMKPHRLALTHSLVLHYGLYKKMIVFKPYQASQHDMCRFHSEDYIDFLQRVSPNNMQGFTKSLNAFNVGDDCPVFPGLFEFCSRYTGASLQGATQLNNKICDIAINWAGGLHHAKKFEASGFCYVNDIVIGILELLKYHPRVLYIDIDIHHGDGVQEAFYLTDRVMTVSFHKYGNYFFPGTGDMYEVGAESGRYYCLNVPLRDGIDDQSYKHLFQPVINQVVDYYQPTCIVLQCGADSLGCDRLGCFNLSIRGHGECVEYVKSFNIPLLVLGGGGYTVRNVARCWTYETSLLVDEPISDELPYSEYFEYFAPDFTLHPDVSTRIENQNSRQYLDQIRQTIFENLKMLNHAPSVQIHDVPSDLLSYDRTDEPDPEERGSEENYSRPEAPNEFYDGDHDNDKESDVEI
SIO_010081: HDAC3
subclass of: SO_0000673
so part of: HDAC3
location: join(2094009..2094063,2094318..2094400,2096928..2097070,2098711..2098792,2098967..2099023,2099116..2099171,2100405..2100538,2100787..2100867,2100962..2101035,2101169..2101233,2101967..2102056,2102159..2102217,2102659..2102738,2103030..2103187,2103452..2103521)
location: region:2094009-2103521:1
so has part: feature:2094009-2094063:1:exon
so has part: feature:2094318-2094400:1:exon
so has part: feature:2096928-2097070:1:exon
so has part: feature:2098711-2098792:1:exon
so has part: feature:2098967-2099023:1:exon
so has part: feature:2099116-2099171:1:exon
so has part: feature:2100405-2100538:1:exon
so has part: feature:2100787-2100867:1:exon
so has part: feature:2100962-2101035:1:exon
so has part: feature:2101169-2101233:1:exon
so has part: feature:2101967-2102056:1:exon
so has part: feature:2102159-2102217:1:exon
so has part: feature:2102659-2102738:1:exon
so has part: feature:2103030-2103187:1:exon
so has part: feature:2103452-2103521:1:exon

XP_030813497.1
type: Protein
SIO_000068: ncbiprotein

position:2094009:1
position: 2094009
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2103521:1
position: 2103521
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2094009-2094063:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2094318-2094400:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2096928-2097070:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2098711-2098792:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2098967-2099023:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2099116-2099171:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2100405-2100538:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2100787-2100867:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2100962-2101035:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2101169-2101233:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:2101967-2102056:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:2102159-2102217:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:2102659-2102738:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:2103030-2103187:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:2103452-2103521:1:exon

LOC115908625
type: Gene
subclass of: SO_0000704
RO_0002162: 87175
gene: LOC115908625
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 2114633..2129469
location: region:2114633-2129469:1
so has part: feature:2114633-2129469:1:exon
subclass of: SO_0000011

115908625
type: Gene
SIO_000068: ncbigene

position:2114633:1
position: 2114633
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2129469:1
position: 2129469
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2114633-2129469:1:exon

LOC115908625
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 87175
nc RNA class: lncRNA
gene: LOC115908625
product: uncharacterized LOC115908625
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XR_004061124.1
SIO_010081: LOC115908625
subclass of: SO_0000673
so part of: LOC115908625
location: join(2114633..2114701,2117161..2117335,2122664..2122717,2126619..2129469)
location: region:2114633-2129469:1
so has part: feature:2114633-2114701:1:exon
so has part: feature:2117161-2117335:1:exon
so has part: feature:2122664-2122717:1:exon
so has part: feature:2126619-2129469:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2114633-2114701:1:exon

position:2114701:1
position: 2114701
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2117161-2117335:1:exon

position:2117161:1
position: 2117161
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2117335:1
position: 2117335
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2122664-2122717:1:exon

position:2122664:1
position: 2122664
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2122717:1
position: 2122717
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:2126619-2129469:1:exon

position:2126619:1
position: 2126619
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC115908821
type: Gene
subclass of: SO_0000704
RO_0002162: 87175
gene: LOC115908821
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(2154401..2261456)
location: region:2154401-2261456:-1
so has part: feature:2154401-2261456:-1:exon
subclass of: SO_0000010

115908821
type: Gene
SIO_000068: ncbigene

position:2154401:-1
position: 2154401
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2261456:-1
position: 2261456
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2154401-2261456:-1:exon

LOC115908821
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 87175
gene: LOC115908821
product: protocadherin gamma-A12-like
exception: unclassified transcription discrepancy
note: The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: inserted 4 bases in 4 codons; deleted 5 bases in 4 codons; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 21 ESTs, 317 Proteins, and 82% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_030957685.1
SIO_010081: LOC115908821
subclass of: SO_0000673
so part of: LOC115908821
location: complement(join(2154401..2156816,2161623..2161711,2176876..2176934,2254850..2257352,2257486..2257619,2258855..2261456))
location: region:2154401-2261456:-1
so has part: feature:2258855-2261456:-1:exon
so has part: feature:2257486-2257619:-1:exon
so has part: feature:2254850-2257352:-1:exon
so has part: feature:2176876-2176934:-1:exon
so has part: feature:2161623-2161711:-1:exon
so has part: feature:2154401-2156816:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2258855-2261456:-1:exon

position:2258855:-1
position: 2258855
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2257486-2257619:-1:exon

position:2257486:-1
position: 2257486
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2257619:-1
position: 2257619
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2254850-2257352:-1:exon

position:2254850:-1
position: 2254850
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2257352:-1
position: 2257352
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:2176876-2176934:-1:exon

position:2176876:-1
position: 2176876
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2176934:-1
position: 2176934
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:2161623-2161711:-1:exon

position:2161623:-1
position: 2161623
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2161711:-1
position: 2161711
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:2154401-2156816:-1:exon

position:2156816:-1
position: 2156816
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC115908821
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 87175
gene: LOC115908821
exception: unclassified translation discrepancy
note: The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: inserted 4 bases in 4 codons; deleted 5 bases in 4 codons; Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: LOW QUALITY PROTEIN: protocadherin gamma-A12-like
translation: MAVRRRQRRGPGGGRALLAALLLCVWCRAAAERLRYAIPEELARGSLVGPLARDLGLSADQLPARKLQVASAGKKQLKYFMVNEENGNLYVNERLDREEMCGASVTCSASFEVLVHNPLNIFQVRVDIEDVNDNSPVFSKAALDLEIGEWIPPGAHFPLEMAHDADVGSNSLLTYQLTSNPSFSLVSRKSREGSKQPELVLERALDRRXESSFELVLTAVDGGEPARSGLSXIRINVTDANDNPPVFSKRPYEDDLQRICRRGSSAERVRATDADMGTNGRITYRFGKMPVKAPQLFAIDAESGKDHAKGPLDFEEKKKYILAVEATDGGXSADHCEVQIDILDENDNAPEITILSLSSPVPEDAPVGTVVALLNVNDPDSGENGQVSCELSGEAPLSIVASSGGSYKVVTSGALDREQASEQRVTVVARDRGRPALWSSRELVLEVSDVNDNAPVFEEAAYSAYVAENNAAGALVLRVQARDADAGANGRVSYWLAGGSAGAAGAAPLVSVEARSGALYAQRSXDYEQCREFTVAVRAQDGGSPARSSTATVRVFVLDRNDNAPRVLWPAAAARAAAGEAAGGAAPPFEVVPRSAEAGYLVAKVVAVDADAGRNAWLSYELVQASEPALFRVGLHSGEVRTARAVAERDAAKQRLVALVKDHGQPALSATATLHVLLADSLREALPELSERPAAAEAAAAELQFYLVLALALLSALLVLSVALAVLARLRRAGPPAVLRCLGAQRFAARRRLPGRLLRGHLALLLQPVRAAAGPRPARGRLAAAAAGAHPVGGGASGRRFLRQAEPEQYRRDGRAAGRIRPLGSARCLQCREEAAGAAVDREEREEARSPTGSPARCDRFDRLFPSEAGNSWPRCGAAAEMCAAGRRWGRRQRALLWAVLLAAWEAAWGQLRYSVPEEMPKGSFVGDVAKDLGLQLPEIRDRGVRIVTEGRTQYFALHGKTGHLVTAERIDREQLCERVQQCVLRCELIVEGEMKFYGIEVEITDINDNAPSFKEIELEERISETTAPGSRFPLAEAHDPDSGRNSLQSYELSGDEHFSLAVQAGPGGDQRPELVLAKALDREEAAFHELLLRASDGGDPARTGTARIRVTVLDANDNAPVFSQAEYTVRVPEDVPVGSVLVTVTATDADEGLYGHVKYSFKKITEKASKIFYLDTETGAITLLRSLDFEEGDSYELDVQARDGGGLSDTTKVTITVTDINDNAPEISVRSALSEISEDAPSGTTVALLHVQDRDSGANGEVRWSLDRDVPFRLQSSHGSYYSVVTARELDREQVSEYNVTVRAADGGSPALQSSAVLALRVLDVNDNAPLFLEERYSARLAENNAAGALVLTVRATDADWGQNARVRYRLAEGRVRGAPLSSYVSVQAETGALYALRSLDYEQLRELQLCVLAEDGGAPALSSNVSVRLLIVDENDNAPQVLYPPPAAAAGSGSAAWSGVELAPRRSEAGALVAKVVAVDADAGQNAWLSYELAKATEPGLFRVGLHSGEVRTARSPLARDAARHSLLVLVRDHGRPALSATATLSVLLADSVAELLAELASAPDDQAAAPGQPAASLTRWLVLAVAAVSCLFLAFLLLLLALRLRRCHRQHLLPPDSGALRGVPVSHFVGIDGVRAFLHSYSHDVSLTADSRKSHLRFSAASCCDTLPARPPPDEPAPLLGEDDPTGALPANPAPPSQAQPNTDWRFSQTQRPGTSGSQNGEEAGAWPNNQFDTEMLQAMILASANEAADGNSTLGGGNGTMGLSARYGPQFTLQHVPDYRQNVYIPGSNATLTNAAGKRDAKNAAPAAGNKKKSGKKEKK
SIO_010081: LOC115908821
subclass of: SO_0000673
so part of: LOC115908821
location: complement(join(2156590..2156816,2161623..2161711,2176876..2176934,2254850..2257352,2257486..2257619,2258855..2261318))
location: region:2156590-2261318:-1
so has part: feature:2258855-2261318:-1:exon
so has part: feature:2257486-2257619:-1:exon
so has part: feature:2254850-2257352:-1:exon
so has part: feature:2176876-2176934:-1:exon
so has part: feature:2161623-2161711:-1:exon
so has part: feature:2156590-2156816:-1:exon

XP_030813545.1
type: Protein
SIO_000068: ncbiprotein

position:2156590:-1
position: 2156590
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2261318:-1
position: 2261318
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2258855-2261318:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2257486-2257619:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2254850-2257352:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2176876-2176934:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2161623-2161711:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2156590-2156816:-1:exon

LOC115908532
type: Gene
subclass of: SO_0000704
RO_0002162: 87175
gene: LOC115908532
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(2197039..2199464)
location: region:2197039-2199464:-1
so has part: feature:2197039-2199464:-1:exon
subclass of: SO_0000010

115908532
type: Gene
SIO_000068: ncbigene

position:2197039:-1
position: 2197039
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2199464:-1
position: 2199464
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2197039-2199464:-1:exon

LOC115908532
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 87175
gene: LOC115908532
product: protocadherin gamma-B5-like
exception: unclassified transcription discrepancy
note: The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: deleted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 31 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_030957180.1
SIO_010081: LOC115908532
subclass of: SO_0000673
so part of: LOC115908532
location: complement(2197039..2199464)
location: region:2197039-2199464:-1
so has part: feature:2197039-2199464:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2197039-2199464:-1:exon

LOC115908532
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 87175
gene: LOC115908532
exception: unclassified translation discrepancy
note: The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: deleted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: LOW QUALITY PROTEIN: protocadherin gamma-B5-like
translation: MAVRRRQRRGPGGGRALLAALLLCVWCRAAAERLRYAIPEELARGSLVGPLARDLGLSADQLPARKLQVASAGKKQLKYFTVNEENGNLYVNERLDREEMCGDSATCSVSFEALVHNPLNIFHIEVDIQDVNDNAPRFLKENIHYEIIESTPPGARFAVGVAEDADVGSNALQGYELEANGYFTVEVKESQDGSKFAELVLRRALDRESEPSLRLLLTALDGGDPPRTGTAQLWINVTDANDNPPVFAQDRYRVSLREDTPPGSTVLNVISIDADAGTNAHITYSFGKMPAKVLQKFVVDAQSGTITLQEGLDFEDTRGYMLLVEARDGGGMVAHSKVEVEVQDVNDNAPEITVLSLSSPVPEDAPAGTVVALLNVKDPDSGENGQVSCELSGEAPLSIVASPGGSYKVVTSGALDREQASEQRVTVVARDRGRPALWSSRELVLEVSDVNDNAPVFEEAAYSAYVAENNAAGALVLRVQARDADAGTNGRVSYWLAGGSAGAAGAAPLVSVEARSGALYAQRSLDYEQCREFTVAVRAQDGGSPARSSTATVRVFVLDRNNNAPRVLWPAAAAGEAAGGAAPPFEVVPRSAEAGYLVAKVVAVDADAGRNAWLSYELVQASEPALFRVGLHSGEVRTARAVAERDAAKQRLVALVKDHGQPALSATATLHVLLADSLREALPELSDRDAVSLLTSDLNLILVVSLSVVVFIIRFHSHFCFFL
SIO_010081: LOC115908532
subclass of: SO_0000673
so part of: LOC115908532
location: complement(2197171..2199343)
location: region:2197171-2199343:-1
so has part: feature:2197171-2199343:-1:exon

XP_030813040.1
type: Protein
SIO_000068: ncbiprotein

position:2197171:-1
position: 2197171
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2199343:-1
position: 2199343
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2197171-2199343:-1:exon

LOC115908533
type: Gene
subclass of: SO_0000704
RO_0002162: 87175
gene: LOC115908533
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(2203974..2217325)
location: region:2203974-2217325:-1
so has part: feature:2203974-2217325:-1:exon
subclass of: SO_0000010

115908533
type: Gene
SIO_000068: ncbigene

position:2203974:-1
position: 2203974
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2217325:-1
position: 2217325
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2203974-2217325:-1:exon

LOC115908533
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 87175
gene: LOC115908533
product: protocadherin gamma-A12-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 33 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XM_030957181.1
SIO_010081: LOC115908533
subclass of: SO_0000673
so part of: LOC115908533
location: complement(join(2203974..2205329,2215334..2217325))
location: region:2203974-2217325:-1
so has part: feature:2215334-2217325:-1:exon
so has part: feature:2203974-2205329:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2215334-2217325:-1:exon

position:2215334:-1
position: 2215334
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2203974-2205329:-1:exon

position:2205329:-1
position: 2205329
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC115908533
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 87175
gene: LOC115908533
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protocadherin gamma-A12-like
translation: MCAAGRRWGRRQRALLWAVLLAAWEAAWGQLRYSVPEEMPKGSFVGDVAKDLGLQLPEIRDRGVRIVSEGRTQYFALHGKTGHLVTAERIDREQLCRLVEKCVLRCELIVEGEMQVYGIEVEITDINDNAPSFKEIELEERISEMTGPGSRFPLAEAHDPDSGRNSLQSYELSGDEHFSLAVQAGPGGDQRPELVLAKALDREEAAFHELLLRASDGGDPARTGTARIRVTVLDANDNAPVFSQAEYTVRVPEDVPVGSVLVTVTATDADEGANGHVKYSLKKVSDMASNIFHLDSGSGAITLLQSLDFEEGDSYELEVQARDGGGLFDTAKVTISVTDKNDNAPVISVRSALSEISEDAPSGTTVALLHVHDQDSGPTARCAARSMGTSHSGWRSPIKTTTVW
SIO_010081: LOC115908533
subclass of: SO_0000673
so part of: LOC115908533
location: complement(2204115..2205329)
location: region:2204115-2205329:-1
so has part: feature:2204115-2205329:-1:exon

XP_030813041.1
type: Protein
SIO_000068: ncbiprotein

position:2204115:-1
position: 2204115
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2204115-2205329:-1:exon

LOC115908534
type: Gene
subclass of: SO_0000704
RO_0002162: 87175
gene: LOC115908534
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(2227442..2230075)
location: region:2227442-2230075:-1
so has part: feature:2227442-2230075:-1:exon
subclass of: SO_0000010

115908534
type: Gene
SIO_000068: ncbigene

position:2227442:-1
position: 2227442
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2230075:-1
position: 2230075
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2227442-2230075:-1:exon

LOC115908534
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 87175
gene: LOC115908534
product: protocadherin gamma-A7-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 11 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_030957183.1
SIO_010081: LOC115908534
subclass of: SO_0000673
so part of: LOC115908534
location: complement(2227442..2230075)
location: region:2227442-2230075:-1
so has part: feature:2227442-2230075:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2227442-2230075:-1:exon

LOC115908534
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 87175
gene: LOC115908534
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protocadherin gamma-A7-like
translation: MCAAGRRWGRRQRALLWAVLLAAWEAAWGQLRYSVPEEMPKGSFVGDVAKDLGLQLTEIRDSGVSIVSEGRTQYFALNRKTGHLVTAERIDREQLCESVQQCVLRCELIVEGQMQVYGIQVEITDINDNAPSFREPQTELRMSEMTAPGSRFPLAEAHDPDSGRNALQSYELSGDEHFSLAVQAGPGGDQRPELVLAKALDREEAAFHELLLRASDGGDPARTGTARIRVTVLDVNDNAPVFSQAEYTVRVPEDVPVGSILVTVTATDADEGSYGNLKYSIQKITEKASQIFQLDGDTGAITLLQSLDFEEDNSYELGVQAHDEGALFDTTKVVVTVTDVNDNVPEISMRSALREISEDAPSGTVVALLHVRDRDSGANGEVRCSLAEGVPFRLEKFF
SIO_010081: LOC115908534
subclass of: SO_0000673
so part of: LOC115908534
location: complement(2227571..2228767)
location: region:2227571-2228767:-1
so has part: feature:2227571-2228767:-1:exon

XP_030813043.1
type: Protein
SIO_000068: ncbiprotein

position:2227571:-1
position: 2227571
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2228767:-1
position: 2228767
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2227571-2228767:-1:exon

LOC115908535
type: Gene
subclass of: SO_0000704
RO_0002162: 87175
gene: LOC115908535
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(2247297..2248476)
location: region:2247297-2248476:-1
so has part: feature:2247297-2248476:-1:exon
subclass of: SO_0000010

115908535
type: Gene
SIO_000068: ncbigene

position:2247297:-1
position: 2247297
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2248476:-1
position: 2248476
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2247297-2248476:-1:exon

LOC115908535
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 87175
gene: LOC115908535
product: protocadherin gamma-B3-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 13 Proteins, and 92% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_030957184.1
SIO_010081: LOC115908535
subclass of: SO_0000673
so part of: LOC115908535
location: complement(2247297..2248476)
location: region:2247297-2248476:-1
so has part: feature:2247297-2248476:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2247297-2248476:-1:exon

LOC115908535
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 87175
gene: LOC115908535
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protocadherin gamma-B3-like
translation: MAVRRRQRRGPGGGRALLAALLLCVWCRAAAERLRYAIPEELARGSLVGPLARDLGLSADQLPARKLQVASAGKKQLKYFMVNEENGNLYVNERLDREEMCGDSATCSVSFEVLVHNPLNVFRVEVSIEDVNDNSPAFSKAVLELEIGEWTLPGARFPLEMAQDADVGSNSLLTYQLTSNPSFSLSIKESPDGSKQPELVLERALDREKQSSFELVLTAVDGGEPTRSGAVQIRVNVTDANDNPPVFSKTIYEARFAENLPAGSLVLRVRATDADAGTNGRVSYSFSNIQAPSVLCSLWTAIAGR
SIO_010081: LOC115908535
subclass of: SO_0000673
so part of: LOC115908535
location: complement(2247431..2248348)
location: region:2247431-2248348:-1
so has part: feature:2247431-2248348:-1:exon

XP_030813044.1
type: Protein
SIO_000068: ncbiprotein

position:2247431:-1
position: 2247431
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2248348:-1
position: 2248348
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2247431-2248348:-1:exon

LOC115908822
type: Gene
subclass of: SO_0000704
RO_0002162: 87175
gene: LOC115908822
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(2267106..2275408)
location: region:2267106-2275408:-1
so has part: feature:2267106-2275408:-1:exon
subclass of: SO_0000010

115908822
type: Gene
SIO_000068: ncbigene

position:2267106:-1
position: 2267106
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2275408:-1
position: 2275408
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2267106-2275408:-1:exon

LOC115908822
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 87175
gene: LOC115908822
product: protocadherin-16-like
exception: unclassified transcription discrepancy
note: The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: inserted 3 bases in 2 codons; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, 224 Proteins, and 90% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_030957686.1
SIO_010081: LOC115908822
subclass of: SO_0000673
so part of: LOC115908822
location: complement(join(2267106..2267138,2267709..2270218,2272136..2274882,2275371..2275408))
location: region:2267106-2275408:-1
so has part: feature:2275371-2275408:-1:exon
so has part: feature:2272136-2274882:-1:exon
so has part: feature:2267709-2270218:-1:exon
so has part: feature:2267106-2267138:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2275371-2275408:-1:exon

position:2275371:-1
position: 2275371
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2272136-2274882:-1:exon

position:2272136:-1
position: 2272136
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2274882:-1
position: 2274882
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2267709-2270218:-1:exon

position:2267709:-1
position: 2267709
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2270218:-1
position: 2270218
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:2267106-2267138:-1:exon

position:2267138:-1
position: 2267138
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC115908822
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 87175
gene: LOC115908822
exception: unclassified translation discrepancy
note: The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: inserted 3 bases in 2 codons; Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: LOW QUALITY PROTEIN: protocadherin-16-like
translation: MFERAQGFKKPDDVAAAPPGVAVGRRRAALEPPPPPPQRPAPAGCSLARRRPQRQRHRQQQQRREAARAVWLPFSGVCFGRRECLEGLQEAGARRAQRAENGGEAAAEARAGRRXRALLAALLLCVWCRAAAERLRYAIPEELARGSLVGPLARDLGLSADQLPARKLQVASLGKKQLKYFTVNEENGNLYVNERLDREEMCGKSATCSVSFEVLVHNPLNVFQVEVSIEDVNDNSPVFSKAALDLEISELIPPGARFPLEMARDADAGSNSMLTYQLTSDPSFSLSVKEKPGGKKQPELVLERPLDREKQSFFELVLAAVDGGEPERSGTVLIHVNVTDANDNPPVFSKSVYEARVAENLPAGSLVLRVRATDADVGSNGQVSYSFGNVPDDVPSLFAIDSESGEIRTVGPLDFEEENRYIFGLEATDGGGLTDHCEVQIDITDENDNAPEINILSLSSPVPEDAPAGTVVAVLNVNDPDSGENGQVSCELSGEAPLSIVASSGGSYKVVTSGPLDREQASEQRVTVVARDRGRPALWSSRELVLEVSDVNDNAPVFEEAAYSAYVAENNAAGALVLRVQARDADADANGRVSYWLAGGSAGAAGAAPLVSVEARSGALYAQRSLDYEQCREFTVAVRAQDGGSPARSSTATVRVFVLDRNDNAPRVLWPAAAAXGGGGRGCGRAAPPFEVVPRSAEAGYLVAKVVAVDADAGRNAWLSYELVQASEPALFRVGLHSGEVRTARAVAERDAAKQRLVALVKDHGQPALSATATLHVLLADSLREALPELSERPAAAEAAAAELQFYLVLALALLSALLVLSAALAVLARLRRAGPPAVLRCLGAQRFSLPGAAFPADFCEGTLPYSYNLCVPPPARALPEAAWPPPPPVPILSAEELLGGDALEKPSSNSSAIEGEVSAESDAPQVCRLAAGLDRRCCGAGGSAAEMCAAGRRWGRRQRALLWAVLLAAWEAAWGQLRYSVPEEMPKGSFVGDVAKDLGLQLTEIRDRGVHILDKGRTQYFALHGKTGHLVTAERIDREQLCESVQQCVLRCELIVEGEMKFYGIEVEITDINDNSPSFREAEIELRMIETTAPGSRFHLPDAHDPDTGRNSLQSYELSGDEHFSLAVQAGPGGDQRPELVLAKALDREEAAFHELLLRASDGGDPARTGTARIRVTVLDANDNAPVFSQAEYAVRVPEDVPVGSILVTVTAMDADEGLNGGMKYSFKKITEKASQIFQLDSDTGAITLTRNLDFEGLQSYELEIQVRDGGDLSDIAKVVITVTDVNDNAPELTVSSALSEISEDAPSGTVVALLHVQDRDSGANGDVRCSLDGGVPFRLEKSYQDYYRVVTARELDREQVSEYNVTVRAADGGSPALQSSAVLALRVLDVNDNAPVFLEERYSARLAENNAAGALVLTVRATDADWGQNARVRYRLAEGRVRGAPLSSYVSVQAETGALYALRSLDYEQLRELQLCVLAEDGGAPALSSNVSVRLLIVDENDNAPQVLYPPPAAAAGSGSAAWSGVELAPRRSEAGALVAKVVAVDADAGQNAWLSYELAKATEPGLFRVGLHSGEVRTARSPLARDAARHSLLVLVRDHGRPALSATATLSVLLADSVAELLAELASAPDDQAAAPGQPAASLTRWLVLAVAAVSCLFLAFLLLLLALRLRRCHRQHLLPPDSGALRGVPVSHFVGIDGVRAFLHSYSHDVSLTADSRKSHLRFSAASCCDTLPARPPPDEPAPLLGDDDPTGALPTAPAPPSRGFDQAISGP
SIO_010081: LOC115908822
subclass of: SO_0000673
so part of: LOC115908822
location: complement(join(2267106..2267138,2267709..2270218,2272136..2274882,2275371..2275408))
location: region:2267106-2275408:-1
so has part: feature:2275371-2275408:-1:exon
so has part: feature:2272136-2274882:-1:exon
so has part: feature:2267709-2270218:-1:exon
so has part: feature:2267106-2267138:-1:exon

XP_030813546.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:2275371-2275408:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2272136-2274882:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2267709-2270218:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2267106-2267138:-1:exon

LOC115908527
type: Gene
subclass of: SO_0000704
RO_0002162: 87175
gene: LOC115908527
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(2282529..2286294)
location: region:2282529-2286294:-1
so has part: feature:2282529-2286294:-1:exon
subclass of: SO_0000010

115908527
type: Gene
SIO_000068: ncbigene

position:2282529:-1
position: 2282529
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2286294:-1
position: 2286294
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2282529-2286294:-1:exon

LOC115908527
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 87175
gene: LOC115908527
product: protocadherin gamma-A10-like
exception: unclassified transcription discrepancy
note: The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: inserted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 154 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_030957176.1
SIO_010081: LOC115908527
subclass of: SO_0000673
so part of: LOC115908527
location: complement(2282529..2286294)
location: region:2282529-2286294:-1
so has part: feature:2282529-2286294:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2282529-2286294:-1:exon

LOC115908527
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 87175
gene: LOC115908527
exception: unclassified translation discrepancy
note: The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: inserted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: LOW QUALITY PROTEIN: protocadherin gamma-A10-like
translation: MCAAGRRWGRRQRALLWAVLLAAWEAAWGQLRYSVPEEMPKGSFVGDVAKDLGLQLPEINDHGVHITERGRTQRFALHGKTGHLVTAERIDREQLCRLVEKCVLRCELIVEGQMQVYGIEVEIMDINDNAPSFLEAETELRMSEMTAPGVRFPLPRAHDPDTGQNSLQSYELSGDEHFSLAVQAGPGGDQRPELVLAKALDREEAAFHELLLRASDGGDPARTGTARIRVTVLDANDNAPVFSQAEYTVRVPEDVPVGSVLVTVTATDADDGLYGHVKYSMKKETDMESDIFHLDTETGAIKLLRILDFEEDNLYELEVQAHDSGALFDTAKVTITVTDVNDNAPELTVSSKLNEIPEDAQPGTVVALLHVQDRDSGANGEVRCLIDKDVPFRLEKSFDEYYRVVTARELDREQVSEYNVTVRAADGGSPALQSSAVLALRVLDVNDNAPVFLEERYSARLAENNAAGALVLTVRATDADWGQNARVRYRLAEGRVRGAPLSSYVSVQAETGALYALRSLDYEQLRELQLCVLAEDGGAPALSSNVSVRLLIVDENDNAPQVLYPPPAAAAGSGAAAWSGVELAPRRSEAGALVAKVVAVDADAGQNAWLSYELAKATEPGLFRVGLHSGEVRTARSPLARDAARHSLLVLVRDHGRPXRSATATLSVLLADSVAELLAELASAPDDQAAAPGQPAASLTRWLVLAVAAVSCLFLAFLLLLLALRLRRCHRQHLLPPDSGALRGVPVSHFVGIDGVRAFLHSYSHDVSLTADSRKSHLRFSAASCCDTLPARPPPDEPAPPPRGRGSCRSPSPRTPSLFR
SIO_010081: LOC115908527
subclass of: SO_0000673
so part of: LOC115908527
location: complement(2282534..2284995)
location: region:2282534-2284995:-1
so has part: feature:2282534-2284995:-1:exon

XP_030813036.1
type: Protein
SIO_000068: ncbiprotein

position:2282534:-1
position: 2282534
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2284995:-1
position: 2284995
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2282534-2284995:-1:exon

LOC115908823
type: Gene
subclass of: SO_0000704
RO_0002162: 87175
gene: LOC115908823
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(2287002..2289479)
location: region:2287002-2289479:-1
so has part: feature:2287002-2289479:-1:exon
subclass of: SO_0000010

115908823
type: Gene
SIO_000068: ncbigene

position:2287002:-1
position: 2287002
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2289479:-1
position: 2289479
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2287002-2289479:-1:exon

LOC115908823
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 87175
gene: LOC115908823
product: protocadherin gamma-B5-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 13 Proteins
transcript id: XM_030957687.1
SIO_010081: LOC115908823
subclass of: SO_0000673
so part of: LOC115908823
location: complement(2287002..2289479)
location: region:2287002-2289479:-1
so has part: feature:2287002-2289479:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2287002-2289479:-1:exon

LOC115908823
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 87175
gene: LOC115908823
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protocadherin gamma-B5-like
translation: MAVRRRQRRGPGGGRALLAALLLCVWCRAAAERLRYAIPEELARGSLVGPLARDLGLSADQLPARKLRLSEEKQYFTVNEENGNLYVNERLDREEMCGKSPTCSVSFEALMHNPLNVFHVEVSIEDVNDNSPVFSKAAVDFEISELIPPGARFPLEMARDADAGTNSVLTYQLTSDPSFSLSVKEKPGGKKQPELVLERPLDREKQSFFELVLTAVDGGEPARSGTVLIHVNVTDANDNPPVFSKSVYEARVAENLQAGSLVLRVRATDADVGSNGQVSYSFGNVPDDVPSLFAIDSESGEIRTVGPLDFEEENRYIFGLEATDGGGLTDHCEVQIDITDENDNAPEINILSLSSPVPEDAPSGTVVALLKVRDLDSGENGQVSCELSGEAPLSIVASSGGSYKVVTSGPLDREQVSEQRVTVVARDRGRPALWSSRELVLEVSDVNDNAPVFEEAAYSAYVAENNAAGALVLRVQARDADAGANGRVSYWLAGGSAGAAGAAPLVSVEARSGALYAQRSLDYEQCREFTVAVRAQDGGSPARSSTATVRVFVLDRNDNAPRVLWPAAAARAAAGEAAGGAAPPFEVVPRSAEAGYLVAKVVAVDADAGRNAWLSYELVQASEPALFRVGLHSGEVRTVRAVAERDAAKQRLVALVKDHGQPALSATATLHVLLADSLREALPELSERPAAAEAAAAELQFYLVLALALLSALLVLSVALAVLARLRRAGPPAVLRCLGAQRFSLPGAAFPADFCEGTLPYSYNLCVPPPARALPEAAWPPPPPVPILSAEELLGGDSCDKPSPGSTAVTGEPPANPDAPQVCKA
SIO_010081: LOC115908823
subclass of: SO_0000673
so part of: LOC115908823
location: complement(2287002..2289479)
location: region:2287002-2289479:-1
so has part: feature:2287002-2289479:-1:exon

XP_030813547.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:2287002-2289479:-1:exon

LOC115908824
type: Gene
subclass of: SO_0000704
RO_0002162: 87175
gene: LOC115908824
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 2294764..2296163
location: region:2294764-2296163:1
so has part: feature:2294764-2296163:1:exon
subclass of: SO_0000010

115908824
type: Gene
SIO_000068: ncbigene

position:2294764:1
position: 2294764
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2296163:1
position: 2296163
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2294764-2296163:1:exon

LOC115908824
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 87175
gene: LOC115908824
product: vegetative cell wall protein gp1-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, 3 Proteins, and 77% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_030957688.1
SIO_010081: LOC115908824
subclass of: SO_0000673
so part of: LOC115908824
location: join(2294764..2294929,2294989..2296163)
location: region:2294764-2296163:1
so has part: feature:2294764-2294929:1:exon
so has part: feature:2294989-2296163:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2294764-2294929:1:exon

position:2294929:1
position: 2294929
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2294989-2296163:1:exon

position:2294989:1
position: 2294989
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC115908824
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 87175
gene: LOC115908824
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: vegetative cell wall protein gp1-like
translation: MHDTEPKRGRRRICQGGSLNGGTHRDRDGIRGEGACGVVVPEQRRGLIGRRPGREATRRASRSAGRRARRRCPRSARRARRARRRCRAAAGAGGGSGAGAAPAAAAGRPGRGTRRRPRPARASASGWRPAGPALPPPGRRARWPARPAARPRCRPAARSAWPWPRAPAARGPAPAPAGCGAPRRGPAASAPCAPRRCAARRGRAPAPWPWPARRTARRSGPRPRPPPPPWPPARRPPSAAAPAPRPTRPQRPSPPLRPAAGTAPAARCRSRPRSAAARTRCCSAPARRRPRPARTAAARAAARSPRSAARTARPSPPAPTRTTTAARPAPAPPPAGSARARSAPSPRPWRAPSAPARPPRCSPPAARCSAPPRTAARCRSRPAPAAPAPRCSAAPATRRRPPAPSRCTPTPAPGPALSLSPHGSSLHRTSPAGTGHPRRASSAHHC
SIO_010081: LOC115908824
subclass of: SO_0000673
so part of: LOC115908824
location: join(2294764..2294929,2294989..2296163)
location: region:2294764-2296163:1
so has part: feature:2294764-2294929:1:exon
so has part: feature:2294989-2296163:1:exon

XP_030813548.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:2294764-2294929:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2294989-2296163:1:exon

LOC115908525
type: Gene
subclass of: SO_0000704
RO_0002162: 87175
gene: LOC115908525
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(2299670..2302370)
location: region:2299670-2302370:-1
so has part: feature:2299670-2302370:-1:exon
subclass of: SO_0000010

115908525
type: Gene
SIO_000068: ncbigene

position:2299670:-1
position: 2299670
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2302370:-1
position: 2302370
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2299670-2302370:-1:exon

LOC115908525
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 87175
gene: LOC115908525
product: protocadherin gamma-B5-like
exception: unclassified transcription discrepancy
note: The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: inserted 2 bases in 2 codons; deleted 2 bases in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 15 Proteins, and 95% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_030957175.1
SIO_010081: LOC115908525
subclass of: SO_0000673
so part of: LOC115908525
location: complement(2299670..2302370)
location: region:2299670-2302370:-1
so has part: feature:2299670-2302370:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2299670-2302370:-1:exon

LOC115908525
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 87175
gene: LOC115908525
exception: unclassified translation discrepancy
note: The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: inserted 2 bases in 2 codons; deleted 2 bases in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: LOW QUALITY PROTEIN: protocadherin gamma-B5-like
translation: MAVRRRQRRGPGGGRALLAALLLCVWCRAAAERLRYAIPEELARGSLVGPLARDLGLSADQLPARKLRLSEEKQYFTVNEENGNLYVNERLDREEMCGDSATCSVSFEALVHNPLNIFRVEVAIEDVNDNSPVFSKAALELEITELTVPGTRFPLEMARDADVGSNSQLTYQLASNPSFSLILDENPGGKKQPALVLEKALDREKQSSFELVLMAVDGGDPARSGTVEVRINVTDANDNQPVFSQRLYEARAAENLPAWSLVLQVVATDADAGSNGRVFYSFGNVPDAIRRLFAVDIDSGEVRLVGPLDFEEKNKYIFGLEAKDGGGLADHCEVHIDITDENDNPPEISILSLSSPVPEDAPEGTVVALLKVRDRDSGENGQVSCELSGEAPLSIVASPGGSYKVVTSGALDREQASEQRVTVVARDRGRPALWSSRELVLEVSDVNDNAPVFEEAAYSAYVAENNAAGALVLRVQARDADAGANGRVSYWLAGGSAGAAGAAPLVSVEARSGALYAQRSXDYEQCREFTVAVRAQDGGSPARSSTATVRVFVLDRNDNAPRVLWPAAAAAGRGRGCGRGRXPPFEVVPRSAEAGYLVAKVVAVDADAGRNAWLSYELVQASEPALFRVGLHSGEVRTARAVAERDAAKQRLVALVKDHGQPALSATATLHVLLADSLREALPELSERPAAAEAAAAELQFYLVLALALLSALLVLSVALAVLARLRRAGPPAVLRCLGAQRFSLPGAAFPADFCEGTLPYSYNLCVPPPARALPEAAWPPPPPVPILSAEELLGGDSCDKPTMNSSAVEGEVPANPDLPQVCKTVNACCSS
SIO_010081: LOC115908525
subclass of: SO_0000673
so part of: LOC115908525
location: complement(2299725..2302223)
location: region:2299725-2302223:-1
so has part: feature:2299725-2302223:-1:exon

XP_030813035.1
type: Protein
SIO_000068: ncbiprotein

position:2299725:-1
position: 2299725
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2302223:-1
position: 2302223
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2299725-2302223:-1:exon

LOC115908825
type: Gene
subclass of: SO_0000704
RO_0002162: 87175
gene: LOC115908825
note: Derived by automated computational analysis using gene prediction method: Gnomon.
pseudo: true
so part of: sequence
location: complement(2306752..2309593)
location: region:2306752-2309593:-1
so has part: feature:2306752-2309593:-1:exon

115908825
type: Gene
SIO_000068: ncbigene

position:2306752:-1
position: 2306752
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2309593:-1
position: 2309593
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2306752-2309593:-1:exon

LOC115908825
type: Exon
subclass of: SO_0000147
RO_0002162: 87175
gene: LOC115908825
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, 44 Proteins, and 90% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC115908825
subclass of: SO_0000673
so part of: LOC115908825
location: complement(2306752..2309593)
location: region:2306752-2309593:-1
so has part: feature:2306752-2309593:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2306752-2309593:-1:exon

LOC115908826
type: Gene
subclass of: SO_0000704
RO_0002162: 87175
gene: LOC115908826
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(2311389..2314090)
location: region:2311389-2314090:-1
so has part: feature:2311389-2314090:-1:exon
subclass of: SO_0000010

115908826
type: Gene
SIO_000068: ncbigene

position:2311389:-1
position: 2311389
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2314090:-1
position: 2314090
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2311389-2314090:-1:exon

LOC115908826
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 87175
gene: LOC115908826
product: protocadherin gamma-B5-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, 122 Proteins, and 93% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_030957689.1
SIO_010081: LOC115908826
subclass of: SO_0000673
so part of: LOC115908826
location: complement(2311389..2314090)
location: region:2311389-2314090:-1
so has part: feature:2311389-2314090:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2311389-2314090:-1:exon

LOC115908826
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 87175
gene: LOC115908826
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protocadherin gamma-B5-like
translation: MKVRSAAQGWAGAGRVALLAALLLCVWCRAAAERLRYAIPEELARGSLVGPLARDLGLSADQLPARKLRLSEEKQYFTVNEENGNLYVNERLDREEMCGESATCSVSFEVLVHNPLNIFHVEVDIQDMNDNAPHFLRENFQLEINELTSPGARFYLGTAEDADVGSNSLQGYELEANKYFAVEVKESQEGSKFAELVLRHSLDREREDSLSLVLTALDGGDPPRTGTAQLRINVTDANDNPPVFAQDRYRVSLREDTPPGSTVLNIFASDADAGTNARITYGFGEMPAKALQKFMVDGERGMITLQEALDFEDTRTFSLAVEARDGGGLVAHCKVEVEVLDVNDNAPEVTLTSVSSPVPEDAPAGTVVALLKVRDRDSGENGQVSCELSGEAPLSIVASSGGSYKVVTSGALDREQASEQRVTVVARDRGRPALWSSRELVLEVSDVNDNAPVFEEAAYSAYVAENNAAGALVLRVQARDADAGANGRVSYWLAGGSAGAAGAAPLVSVEARSGALYAQRSADYEQCREFTVAVRAQDGGSPARSSTATVRVFVLDRNDNAPRVLWPAAAATAAAGEAAGGAAPPFEVVPRSAEAGYLVAKVVAVDADAGRNAWLSYELVQASEPALFRVGLHSGEVRTARAVAERDAAKQRLVALVKDHGQPALSATATLHVLLADSLREALPELSERPAAAEAAAAELQFYLVLALALLSALLVLSVALAVLARLRRAGPPAVLRCLGAQRFSLPGAAFPADFCEGTLPYSYNLCVPPPARALPEAAWPPPPPPVPILSAEELLGGEPLEKPSSNSSPLTGEPPANPDAPQVCNAARSFCYCGFPIIVLSLLFFSAWCP
SIO_010081: LOC115908826
subclass of: SO_0000673
so part of: LOC115908826
location: complement(2311389..2313944)
location: region:2311389-2313944:-1
so has part: feature:2311389-2313944:-1:exon

XP_030813549.1
type: Protein
SIO_000068: ncbiprotein

position:2313944:-1
position: 2313944
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2311389-2313944:-1:exon

LOC115908827
type: Gene
subclass of: SO_0000704
RO_0002162: 87175
gene: LOC115908827
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(2315016..2318667)
location: region:2315016-2318667:-1
so has part: feature:2315016-2318667:-1:exon
subclass of: SO_0000010

115908827
type: Gene
SIO_000068: ncbigene

position:2315016:-1
position: 2315016
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2318667:-1
position: 2318667
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2315016-2318667:-1:exon

LOC115908827
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 87175
gene: LOC115908827
product: protocadherin gamma-A6-like
exception: unclassified transcription discrepancy
note: The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: inserted 1 base in 1 codon; deleted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 27 Proteins, and 86% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_030957690.1
SIO_010081: LOC115908827
subclass of: SO_0000673
so part of: LOC115908827
location: complement(join(2315016..2315024,2316199..2318667))
location: region:2315016-2318667:-1
so has part: feature:2316199-2318667:-1:exon
so has part: feature:2315016-2315024:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2316199-2318667:-1:exon

position:2316199:-1
position: 2316199
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2315016-2315024:-1:exon

position:2315024:-1
position: 2315024
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC115908827
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 87175
gene: LOC115908827
exception: unclassified translation discrepancy
note: The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: inserted 1 base in 1 codon; deleted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: LOW QUALITY PROTEIN: protocadherin gamma-A6-like
translation: MCAAGRRWGRRQRALLWAVLLAAWEAAWGQLRYSVPEEMPKGSFVGDVAKDLGLQLTALKDRDAHVFGTGRTRYFFLDLQNGHLSMMEQVDREDICAAVAKCVLNFEILVKGPMNIYKGEVEIIDINDNPPSFPERRNVLEISENTAPGARFPLERAHDPDIGVNSLQNYECSESSYFTLDVKTGDDGVKYPELLLVKSLDREQKAAHHLILTATDNGSPVKSGSTTIEIIVLDGNDNAPEFTQSVYRVTVKEDLAVGSRVLQVTATDRDEGPNAEVKYSFFQIPEKFDETFKVDPESGEIVVTENLNFEEHEFYELVVQARDAGGLSSHSKVLIKVVDVNNYVPEIVVMSVFTPVPEDTPVGTVIAIFSVQDRDSGVNGEVQCSISDSHPFRLEKSFDNYYRVVTAELLDREQVSEYNVTVRAADGGSPALQSSAVLALRVLDVNDNAPVFLEERYSARLAENNAAGALVLTVRATDADWGQNARVRYRLAEGRVRGAPLSSYVSVQAETGALYALRSLDYEQLRELQLCVLAEDGGAPALSSNVSVRLLIVDENDNAPQVLYPPPPPXAGSGAAAWSGVELVPRRSEAGALVAKVVAVDADAGQNAWLSYELAKATEPGLFRVGLHSGEVRTARSPLARDAARHSLLVLVRDHGRPALSATATLSVLLADSVAELLAELASAPDDQAAAPGQPAASLTRWLVLAVAAVSCLFLAFLLLLLALRLRRCHRQHLLPPDSGALRGVPVSHFVGIDGVRAFLHSYSHDVSLTADSRKSHLRFSAASCCDTLPVRPPDEASGDLVPSGDQVTESGWQVASQGL
SIO_010081: LOC115908827
subclass of: SO_0000673
so part of: LOC115908827
location: complement(join(2315016..2315024,2316199..2318652))
location: region:2315016-2318652:-1
so has part: feature:2316199-2318652:-1:exon
so has part: feature:2315016-2315024:-1:exon

XP_030813550.1
type: Protein
SIO_000068: ncbiprotein

position:2318652:-1
position: 2318652
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2316199-2318652:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2315016-2315024:-1:exon

LOC115908531
type: Gene
subclass of: SO_0000704
RO_0002162: 87175
gene: LOC115908531
note: Derived by automated computational analysis using gene prediction method: Gnomon.
pseudo: true
so part of: sequence
location: complement(2322007..2325389)
location: region:2322007-2325389:-1
so has part: feature:2322007-2325389:-1:exon

115908531
type: Gene
SIO_000068: ncbigene

position:2322007:-1
position: 2322007
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2325389:-1
position: 2325389
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2322007-2325389:-1:exon

LOC115908531
type: Exon
subclass of: SO_0000147
RO_0002162: 87175
gene: LOC115908531
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 53 Proteins, and 72% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC115908531
subclass of: SO_0000673
so part of: LOC115908531
location: complement(2322007..2325389)
location: region:2322007-2325389:-1
so has part: feature:2322007-2325389:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2322007-2325389:-1:exon

LOC115908530
type: Gene
subclass of: SO_0000704
RO_0002162: 87175
gene: LOC115908530
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(2327199..2329876)
location: region:2327199-2329876:-1
so has part: feature:2327199-2329876:-1:exon
subclass of: SO_0000010

115908530
type: Gene
SIO_000068: ncbigene

position:2327199:-1
position: 2327199
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2329876:-1
position: 2329876
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2327199-2329876:-1:exon

LOC115908530
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 87175
gene: LOC115908530
product: protocadherin beta-15-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 124 Proteins, and 88% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_030957179.1
SIO_010081: LOC115908530
subclass of: SO_0000673
so part of: LOC115908530
location: complement(2327199..2329876)
location: region:2327199-2329876:-1
so has part: feature:2327199-2329876:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2327199-2329876:-1:exon

LOC115908530
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 87175
gene: LOC115908530
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protocadherin beta-15-like
translation: MALARQVLCVCAFLGLPLARAEPIRYSVAEEAESGSLVGELAEDAGLTPAQLSARRARLVSEDGRQHLRFERASGRLVVAGRLDREELCAQSDTCMLPFELLLSSPLQFLQVEVTVKDINDHSPVFPEERVTFDILETSEPGSRFPLEVARDLDIGSNTIQEYSMAPKNDFFKLSYGGRITGKKYLELVLEKPLDREEQAEMEFSLIAVDGGSPPRTGTTQVKILILDVNDNAPIFTQEEYIGQVLENMPEGSVVLTVLATDPDAGVNGDITYQFSQAVGQGDSAFVIDPITGEIKLTKPLDFETAHTHELSVRARDGGGLSAICKVLVEVVDVNDNAPELVVSSFNSPLPENTVPGTVVALFTVRDRDSGANGKISCALQDQLFFSLRPAYKNYYELVTVSALDREETPQYILSVTAADAGSPPLTTTQTFTVDISDVNDNAPVFNQTSYTMYVRENNVPTVFVGAVSAADADVGLNAKVTYSLAAEQGPERPWCSCISVNSENGHVFVLRPLDYEHLRQTEVTVSASDAGSPPLRANVTVRLVVLDENDNAPLVLYPAQESSPASSELVPVSAEAGYLISKVVAVDADSGQNSWLSYHLLRATDPGLFSVGLQSGEVRLRRPVTERDSVKQKLLVLVRDNGKPPLSATAALSALLLKDFSDVRLPHSSPASEDQAASLTTYLIIALVFVSLLFLISTAVLVARKVCRRKELKAGHVLYAADTLQSGPADAAAAGTLPRAYCYEISLTTGSGNSEFRFLKPILPNLPPQHCAVGQGSEEEQDFSGVPVSTDDMSPDNAGTLSAGQFNALSFN
SIO_010081: LOC115908530
subclass of: SO_0000673
so part of: LOC115908530
location: complement(2327199..2329640)
location: region:2327199-2329640:-1
so has part: feature:2327199-2329640:-1:exon

XP_030813039.1
type: Protein
SIO_000068: ncbiprotein

position:2329640:-1
position: 2329640
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2327199-2329640:-1:exon

LOC115908529
type: Gene
subclass of: SO_0000704
RO_0002162: 87175
gene: LOC115908529
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(2330493..2334364)
location: region:2330493-2334364:-1
so has part: feature:2330493-2334364:-1:exon
subclass of: SO_0000010

115908529
type: Gene
SIO_000068: ncbigene

position:2330493:-1
position: 2330493
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2334364:-1
position: 2334364
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2330493-2334364:-1:exon

LOC115908529
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 87175
gene: LOC115908529
product: protocadherin beta-15-like
exception: unclassified transcription discrepancy
note: The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: deleted 2 bases in 2 codons; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 22 Proteins, and 95% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_030957177.1
SIO_010081: LOC115908529
subclass of: SO_0000673
so part of: LOC115908529
location: complement(2330493..2334364)
location: region:2330493-2334364:-1
so has part: feature:2330493-2334364:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2330493-2334364:-1:exon

LOC115908529
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 87175
gene: LOC115908529
exception: unclassified translation discrepancy
note: The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: deleted 2 bases in 2 codons; Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: LOW QUALITY PROTEIN: protocadherin beta-15-like
translation: MALARQVLCVCAFLGLPLARAEPIRYSVAEEAESGSLVGELAEDAGLTPAQLSARRARLVSEDGRQHLRFERASGRLVVAGRLDREELCAQSDTCMLPFELLLSNPLQFFRVEVTVKDINDHSPVFPEERVTFDILETSDAGTHFPLEVARDLDIGSNTVQAYSIAPKTDYFSVSYGSRTNGDKYLELVLEKPLDREEHTEMGFHIIAVDGGSPPRSGTIGISIIILDVNDNAPKFTQERYIGKVLENTPEGSVVLTVLATDPDAGVNGDITYQLSQAVGESDLAFVIDPITGEIKLTKPLDFETAHTHELTVRARDGGGLSAICKVLVEVVDVNDNAPELVVSSFSSPLPENTVPGTVVALFTVRDRDSGANGKISCALQDQLFFSLRPAYKNYYELVTVSALDREETPQYILSVTAADAGSPPLTTTQTFTVDISDVNDNAPVFNQTSYTMYVRENNVPTVFVGAVSAADADVGLNAKVTYSLAAEQGPERPWCSCISVNSENGHVFVLRPLDYEHLRQTEVTVSASDAGSPPLRANVTVRLVVLDENDNAPLVLYPAQESSPASSELVPVSAEAGYLISKVVAVDADSGQNSWLSYHLLRATDPGLFSVGLQSGEVRLRRPVTERDSVKQKLLVLVRDNGKPPLSATAALSALLLKDFSDVRLPHSSPASEDQAASLTTYLIIALVFVSLLFLISTAVLVARKVCRRKELKAGHVLYAADTLQSGPADAAAAGTLPRAYCYEISLTTGSGNSEFRFLKPILPSLPPQHCAVGQGPEEEQDFPGVPVSTEDMAPDNAGALSAGQFNALSFN
SIO_010081: LOC115908529
subclass of: SO_0000673
so part of: LOC115908529
location: complement(2331679..2334122)
location: region:2331679-2334122:-1
so has part: feature:2331679-2334122:-1:exon

XP_030813037.1
type: Protein
SIO_000068: ncbiprotein

position:2331679:-1
position: 2331679
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2334122:-1
position: 2334122
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2331679-2334122:-1:exon

LOC115908528
type: Gene
subclass of: SO_0000704
RO_0002162: 87175
gene: LOC115908528
note: Derived by automated computational analysis using gene prediction method: Gnomon.
pseudo: true
so part of: sequence
location: complement(2336029..2338938)
location: region:2336029-2338938:-1
so has part: feature:2336029-2338938:-1:exon

115908528
type: Gene
SIO_000068: ncbigene

position:2336029:-1
position: 2336029
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2338938:-1
position: 2338938
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2336029-2338938:-1:exon

LOC115908528
type: Exon
subclass of: SO_0000147
RO_0002162: 87175
gene: LOC115908528
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 45 Proteins, and 90% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC115908528
subclass of: SO_0000673
so part of: LOC115908528
location: complement(2336029..2338938)
location: region:2336029-2338938:-1
so has part: feature:2336029-2338938:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2336029-2338938:-1:exon

LOC115908802
type: Gene
subclass of: SO_0000704
RO_0002162: 87175
gene: LOC115908802
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(2339023..2344093)
location: region:2339023-2344093:-1
so has part: feature:2339023-2344093:-1:exon
subclass of: SO_0000010

115908802
type: Gene
SIO_000068: ncbigene

position:2339023:-1
position: 2339023
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2344093:-1
position: 2344093
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2339023-2344093:-1:exon

LOC115908802
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 87175
gene: LOC115908802
product: protocadherin beta-15-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 113 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_030957656.1
SIO_010081: LOC115908802
subclass of: SO_0000673
so part of: LOC115908802
location: complement(2339023..2344093)
location: region:2339023-2344093:-1
so has part: feature:2339023-2344093:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2339023-2344093:-1:exon

LOC115908802
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 87175
gene: LOC115908802
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protocadherin beta-15-like
translation: MPVRFLLLRDEAPSSWAVPRLSAAPVKAAFRCWPRLSRCLRDRGPGRAAARAAGGGGCSPSANRWVVPSAKAAPSGCGSGGGRARSGTARASSDQTSSVHFSSVQPSSVQLRPAQLRREEVAPAAAASAAPCHPLPAHPGCVPDRRPESQTAREGARPALRRSPPGIARDTRRDTDTDTGRRRRRRAMALARQVLCVCAFLGLPLARAEPIRYSVAEEAESGSLVGELAEDAGLTPAQLSARRARLVSEDGRQHLRFERASGRLVVAGRLDREELCAQSDTCMLPFELLLSNPLQFFRVEVTVKDINDHSPVFPEERVTFDILERSDPGSSFPLEVAWDLDIGSNTVQKYSISPENEHFSISYGTRSTGKKYLELVLEKPVDREEQEEMAFSVIAVDGGIPPRSGTTQVKIVILDVNDNAPIFTQELYTAKVLENMPEGSVVLTVLATDPDAGVNGDITYQLSQAVRQGDSAFVIDHITGEIKLTKPLDFEAAQMHELSVRARDGGGLSAICKVLVEVVDVNDNAPELVVSSFSSPLPENTVPGTVVALFTVRDRDSGANGKISCALQDQLFFSLRPAYKNYYELVTVSALDREETPQYILSVTAADAGSPPLTTTQTFTVDISDVNDNAPVFNQTSYTMYVRENNVPTVFVGAVSAADADVGLNAKVTYSLAAEQGPERPWCSCISVNSENGHVFVLRPLDYEHLRQTEVTVSASDAGSPPLRANVTVRLVVLDENDNAPLVLYPAQESSPASSELVPVSAEAGYLISKVVAVDADSGQNSWLSYHLLRATDPGLFSVGLQSGEVRLRRPVTERDSVKQKLLVLVRDNGKPPLSATAALSALLLKDFSDVRLPHSSPASEDQAASLTTYLIIALVFVSLLFLISTAVLVARKVCRRKELKAGHVLYAADTLQSGLADAAAAGTLPRAYCYEISLTTGSGNSEFRFLKPILPSLPPQHCAVGQGPEEEQDFSGVPVSTEDMAPDNAGTLSAGQFNALPFN
SIO_010081: LOC115908802
subclass of: SO_0000673
so part of: LOC115908802
location: complement(2340565..2343567)
location: region:2340565-2343567:-1
so has part: feature:2340565-2343567:-1:exon

XP_030813516.1
type: Protein
SIO_000068: ncbiprotein

position:2340565:-1
position: 2340565
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2343567:-1
position: 2343567
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2340565-2343567:-1:exon

LOC115908579
type: Gene
subclass of: SO_0000704
RO_0002162: 87175
gene: LOC115908579
note: Derived by automated computational analysis using gene prediction method: Gnomon.
pseudo: true
so part of: sequence
location: complement(2344963..2347867)
location: region:2344963-2347867:-1
so has part: feature:2344963-2347867:-1:exon

115908579
type: Gene
SIO_000068: ncbigene

position:2344963:-1
position: 2344963
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2347867:-1
position: 2347867
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2344963-2347867:-1:exon

LOC115908579
type: Exon
subclass of: SO_0000147
RO_0002162: 87175
gene: LOC115908579
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 35 Proteins, and 83% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC115908579
subclass of: SO_0000673
so part of: LOC115908579
location: complement(2344963..2347867)
location: region:2344963-2347867:-1
so has part: feature:2344963-2347867:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2344963-2347867:-1:exon

LOC115908520
type: Gene
subclass of: SO_0000704
RO_0002162: 87175
gene: LOC115908520
note: Derived by automated computational analysis using gene prediction method: Gnomon.
pseudo: true
so part of: sequence
location: complement(2349431..2352135)
location: region:2349431-2352135:-1
so has part: feature:2349431-2352135:-1:exon

115908520
type: Gene
SIO_000068: ncbigene

position:2349431:-1
position: 2349431
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2352135:-1
position: 2352135
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2349431-2352135:-1:exon

LOC115908520
type: Exon
subclass of: SO_0000147
RO_0002162: 87175
gene: LOC115908520
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 17 Proteins, and 87% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC115908520
subclass of: SO_0000673
so part of: LOC115908520
location: complement(2349431..2352135)
location: region:2349431-2352135:-1
so has part: feature:2349431-2352135:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2349431-2352135:-1:exon

LOC115908519
type: Gene
subclass of: SO_0000704
RO_0002162: 87175
gene: LOC115908519
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(2352431..2355165)
location: region:2352431-2355165:-1
so has part: feature:2352431-2355165:-1:exon
subclass of: SO_0000010

115908519
type: Gene
SIO_000068: ncbigene

position:2352431:-1
position: 2352431
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2355165:-1
position: 2355165
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2352431-2355165:-1:exon

LOC115908519
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 87175
gene: LOC115908519
product: protocadherin beta-16-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 209 Proteins, and 90% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_030957167.1
SIO_010081: LOC115908519
subclass of: SO_0000673
so part of: LOC115908519
location: complement(2352431..2355165)
location: region:2352431-2355165:-1
so has part: feature:2352431-2355165:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2352431-2355165:-1:exon

LOC115908519
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 87175
gene: LOC115908519
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protocadherin beta-16-like
translation: MKPKKSEEPLPGRAAALLLVLCVSGMRAETARYSVPEEAERGSFVANIAKDLGLTGEELLARQARVVPEGEKQYLQLNQRTGDLVVREQMDREELCGQSEPCLVRFEVLLESPLQSFRAEVRLTDINDHAPMFLNREIVLTIPESAMPGTRFLLESAHDPDVGNNSLQHYSISSNEYFHVYTQQRNDGRRYAELVLDRALDREQQAEVAFSITAVDGGTPPRSGTALIRVVVLDINDNTPVFTQTLYKVSVMENSSEDTIVVVVSASDLDAGTNGEILYSIFQNSEENLQTFKINPETGRIRLKKPLDYEEKKTYEIDVQATDGGGLSTHCKVEVQVKDVNDNAPEVIITSLTSTLSEAAPPDTVVALFNVRDRDSGDNGRTTCELTGEQPFRITVLAADAYALVTSETLDREQAEEYNLTVQARDEGSPALSASKTLLVRLLDVNDNAPTFTQAIYTMVMNENEPAGRSLGRLSATDPDAGENARVRYSLVPPPTGTLAAASFVSVDAESGTIRTLRPLDYEKVPAFEVTVRAADGGSPPLSAQAVLRIVVRDENDNAPVLLHPGPDSSAAGELVPRWAPSGYLVAKVVAVDADAGQNAWLSYELAKATEPGLFRVGLHSGEVRTARAVTERDTARQRLIVLVRDRGRPPRSATATFAVALVDDFSDAFHQLGHDPAGGQQPQEVEEEMLTTYLIASLVCVSSLFLLSILVLTANTLCRARVRAELPPPSPSCYADGDFGSDGVGVGTMGTLSPAYRYEMCLTSGSGRSEFQFLRPILPSLPNKAEAGLDKDEEPLRHSQLACDRETHAGSTATPPF
SIO_010081: LOC115908519
subclass of: SO_0000673
so part of: LOC115908519
location: complement(2352709..2355165)
location: region:2352709-2355165:-1
so has part: feature:2352709-2355165:-1:exon

XP_030813027.1
type: Protein
SIO_000068: ncbiprotein

position:2352709:-1
position: 2352709
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2352709-2355165:-1:exon

LOC115908518
type: Gene
subclass of: SO_0000704
RO_0002162: 87175
gene: LOC115908518
note: Derived by automated computational analysis using gene prediction method: Gnomon.
pseudo: true
so part of: sequence
location: complement(2356032..2361238)
location: region:2356032-2361238:-1
so has part: feature:2356032-2361238:-1:exon

115908518
type: Gene
SIO_000068: ncbigene

position:2356032:-1
position: 2356032
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2361238:-1
position: 2361238
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2356032-2361238:-1:exon

LOC115908518
type: Exon
subclass of: SO_0000147
RO_0002162: 87175
gene: LOC115908518
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, 91 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
pseudo: true
SIO_010081: LOC115908518
subclass of: SO_0000673
so part of: LOC115908518
location: complement(2356032..2356961)
location: region:2356032-2356961:-1
so has part: feature:2356032-2356961:-1:exon

position:2356961:-1
position: 2356961
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2356032-2356961:-1:exon

LOC115908518
type: Exon
subclass of: SO_0000147
RO_0002162: 87175
gene: LOC115908518
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, 91 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
pseudo: true
SIO_010081: LOC115908518
subclass of: SO_0000673
so part of: LOC115908518
location: complement(2358682..2361238)
location: region:2358682-2361238:-1
so has part: feature:2358682-2361238:-1:exon

position:2358682:-1
position: 2358682
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2358682-2361238:-1:exon

LOC115908828
type: Gene
subclass of: SO_0000704
RO_0002162: 87175
gene: LOC115908828
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(2402754..>2452403)
location: region:2402754-2452403:-1
so has part: feature:2402754-2452403:-1:exon
subclass of: SO_0000010

115908828
type: Gene
SIO_000068: ncbigene

position:2402754:-1
position: 2402754
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2452403:-1
position: 2452403
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2402754-2452403:-1:exon

LOC115908828
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 87175
gene: LOC115908828
product: protocadherin alpha-C2-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 30 ESTs, 39 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XM_030957691.1
SIO_010081: LOC115908828
subclass of: SO_0000673
so part of: LOC115908828
location: complement(join(2402754..2404679,2439506..2439594,2441708..2441766,2449962..>2452403))
location: region:2402754-2452403:-1
so has part: feature:2449962-2452403:-1:exon
so has part: feature:2441708-2441766:-1:exon
so has part: feature:2439506-2439594:-1:exon
so has part: feature:2402754-2404679:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2449962-2452403:-1:exon

position:2449962:-1
position: 2449962
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2441708-2441766:-1:exon

position:2441708:-1
position: 2441708
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2441766:-1
position: 2441766
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2439506-2439594:-1:exon

position:2439506:-1
position: 2439506
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2439594:-1
position: 2439594
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:2402754-2404679:-1:exon

position:2404679:-1
position: 2404679
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC115908828
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 87175
gene: LOC115908828
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protocadherin alpha-C2-like
translation: GRAAGGPLRYSVREELPHGAFVGSVASDLGVDPRRLAARGARITSGSGRQYLELELGRGALLVRERMDREALCELSPSCFLSLELVIEQPIEVYNVEVEVLDINDNAPRFPRQDYRLEISESAVPGARFHIESAQDPDVGTNSVQNYLLSPNRHFALDLKGFQSGSKLLELVLQQPLDREQSALQQLVLTAVDGGDPPRSGTAQISVRVVDTNDNPPAFDRSTYTVSLLENSLPGTLVVKLNASDPDEGSNGDVIYSFGSYTPQKVRQLFSVDPHSGEVRVNGTLDYEEASSYEIYVQATDQGPVSMAGHCKVLVNIVDANDNAPEVQLTSLYSPVPEDARSGTVVALMSVTDQDSGLNKQVSLRIPPGLPFTLNSFKNSYTLVTQGKLDHEKAAAYNITVTATDSGSPPLSSQKVIHVEISDINDNPPRFEEPVYSVYIPENNPLGAFLCTIKATDPDVAKNAYVSYSLLDGEIEGLPVASYVSIKSDSGNMYAVRSFDYETLREFQVIVQAQDAGVPPLSSTVTVYIYVVDENDHAPQILYPTSTNTSAALEMIPRSAYAGYLVTKIIAIDGDSGQNAWLFFYLVQTSDPGLFRIELHTGEIRTTRKLGEDSTPTFNLTVEVRDNGEPSMSSSVAITIAVVDRVSKIIPDRRRHFKSPSNYSEVTLYLIIALSAISFVFLFTLIGLSIIKCYRYSLYGSSCCAGCCTVRERSPAELYKQANNNIDARLPQGLKVQPHFIEVRGNGSLTKTYCYKACLTAGSGSDTFMFYNTCGPTGTTGPSAVVTERHLTGQSGQSAQNLIILRNDSITPNEPKHPNPDWRYSASLRAGMQSAVHMEEAGVLRGGAAGPDQQWPTVSSATAEPEAGEVSPPVGAGVNSNSWTFKFGPGNSKQGGPGELPDKFIIPGSPAIISIRQEPPNSQIDKSDFITFGKKEETKKKKKKKKGNKTQEKKEKGNSTTENSDQ
SIO_010081: LOC115908828
subclass of: SO_0000673
so part of: LOC115908828
location: complement(join(2404369..2404679,2439506..2439594,2441708..2441766,2449962..>2452403))
location: region:2404369-2452403:-1
so has part: feature:2449962-2452403:-1:exon
so has part: feature:2441708-2441766:-1:exon
so has part: feature:2439506-2439594:-1:exon
so has part: feature:2404369-2404679:-1:exon

XP_030813551.1
type: Protein
SIO_000068: ncbiprotein

position:2404369:-1
position: 2404369
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2449962-2452403:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2441708-2441766:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2439506-2439594:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2404369-2404679:-1:exon

LOC115908829
type: Gene
subclass of: SO_0000704
RO_0002162: 87175
gene: LOC115908829
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(2452517..2478712)
location: region:2452517-2478712:-1
so has part: feature:2452517-2478712:-1:exon
subclass of: SO_0000010

115908829
type: Gene
SIO_000068: ncbigene

position:2452517:-1
position: 2452517
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2478712:-1
position: 2478712
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2452517-2478712:-1:exon

LOC115908829
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 87175
gene: LOC115908829
product: protocadherin alpha-C1-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 22 Proteins
transcript id: XM_030957692.1
SIO_010081: LOC115908829
subclass of: SO_0000673
so part of: LOC115908829
location: complement(join(2452517..2452726,2452783..2453042,2476807..2478712))
location: region:2452517-2478712:-1
so has part: feature:2476807-2478712:-1:exon
so has part: feature:2452783-2453042:-1:exon
so has part: feature:2452517-2452726:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2476807-2478712:-1:exon

position:2476807:-1
position: 2476807
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2452783-2453042:-1:exon

position:2452783:-1
position: 2452783
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2453042:-1
position: 2453042
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2452517-2452726:-1:exon

position:2452726:-1
position: 2452726
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC115908829
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 87175
gene: LOC115908829
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protocadherin alpha-C1-like
translation: MPEFLSPGARFTLPNAQDLDEGANSVQNYTLSPDEHFYLEMQIRGDASKYPELVLKKALDREQQATHRLVLTAKDGGNPPKSGDVPVIVTVLDSNDNAPEFEHSVYRASILENSPSGTLVVQVHATDLDEGPNGEVRYSFSNTTSADLQRMFSIHPHTGEVTVNGVLAVQRPLLEMLIEARDNGAFGMSSTAKLLVEITDVNNHGPEITITSLSSPIPEDAVPGTVIALLSILDKDPGENGQVTCQISENLPFQLKPSLQNYYSLVTSGLLDRELISEYNITITATDLGSPPLTTQKTVWVQISDVNDNPPVFGADAFDVFMEENNPLGAFLYQVSASDPDIGENGRVSYTLRNSTVAGSALTSFLSMNLANGSIYAKRAFDFEQLRSFHFQVEAKDNGSPALSAATTVNVYISDQNDNAPAILYPTSQNGSVAVEVVPRLADEDYLVTKVVADDEDNAQNAWLSYHLAHSSDSTLFQLSPHTGELRTTRSMRSTDFLKHKVVVVVRDHGDPPLSSTVTVGILLADTLPQALPDFDDSGEPPPLLNATNIYLIVSLACVSFIFAAFIFFLAITRLCRCRTCCCSGCCCPAEDYKKYCYSVHMLPSSHLPPDMLEVTGVGKLTHTYLYRASVGLGPAPQQQQVHKRTPLSAPPAASPRPQSFSSEAGAETRSGGDGTGAAPLQARRPPAPGVPELRGPQHVGAGGGAGRGAGAAPAVPLFPAQQLENEKADPASPGPSSFLLLLILLRAAGGERSEPPLRATGEHGAGGGGAGGGRRLLLAACMRRPGGGGE
SIO_010081: LOC115908829
subclass of: SO_0000673
so part of: LOC115908829
location: complement(join(2452517..2452726,2452783..2453042,2476807..2478712))
location: region:2452517-2478712:-1
so has part: feature:2476807-2478712:-1:exon
so has part: feature:2452783-2453042:-1:exon
so has part: feature:2452517-2452726:-1:exon

XP_030813552.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:2476807-2478712:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2452783-2453042:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2452517-2452726:-1:exon

LOC115908830
type: Gene
subclass of: SO_0000704
RO_0002162: 87175
gene: LOC115908830
note: Derived by automated computational analysis using gene prediction method: Gnomon.
pseudo: true
so part of: sequence
location: complement(2479366..2488927)
location: region:2479366-2488927:-1
so has part: feature:2479366-2488927:-1:exon

115908830
type: Gene
SIO_000068: ncbigene

position:2479366:-1
position: 2479366
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2488927:-1
position: 2488927
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2479366-2488927:-1:exon

LOC115908830
type: Exon
subclass of: SO_0000147
RO_0002162: 87175
gene: LOC115908830
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 50% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC115908830
subclass of: SO_0000673
so part of: LOC115908830
location: complement(2479366..2479575)
location: region:2479366-2479575:-1
so has part: feature:2479366-2479575:-1:exon

position:2479575:-1
position: 2479575
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2479366-2479575:-1:exon

LOC115908830
type: Exon
subclass of: SO_0000147
RO_0002162: 87175
gene: LOC115908830
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 50% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC115908830
subclass of: SO_0000673
so part of: LOC115908830
location: complement(2486415..2488927)
location: region:2486415-2488927:-1
so has part: feature:2486415-2488927:-1:exon

position:2486415:-1
position: 2486415
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2486415-2488927:-1:exon

LOC115908831
type: Gene
subclass of: SO_0000704
RO_0002162: 87175
gene: LOC115908831
note: Derived by automated computational analysis using gene prediction method: Gnomon.
pseudo: true
so part of: sequence
location: complement(2492206..2494794)
location: region:2492206-2494794:-1
so has part: feature:2492206-2494794:-1:exon

115908831
type: Gene
SIO_000068: ncbigene

position:2492206:-1
position: 2492206
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2494794:-1
position: 2494794
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2492206-2494794:-1:exon

LOC115908831
type: Exon
subclass of: SO_0000147
RO_0002162: 87175
gene: LOC115908831
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 Proteins, and 80% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC115908831
subclass of: SO_0000673
so part of: LOC115908831
location: complement(2492206..2494794)
location: region:2492206-2494794:-1
so has part: feature:2492206-2494794:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2492206-2494794:-1:exon

LOC115908832
type: Gene
subclass of: SO_0000704
RO_0002162: 87175
gene: LOC115908832
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(2502009..2508626)
location: region:2502009-2508626:-1
so has part: feature:2502009-2508626:-1:exon
subclass of: SO_0000010

115908832
type: Gene
SIO_000068: ncbigene

position:2502009:-1
position: 2502009
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2508626:-1
position: 2508626
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2502009-2508626:-1:exon

LOC115908832
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 87175
gene: LOC115908832
product: protocadherin alpha-8-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 31 Proteins
transcript id: XM_030957693.1
SIO_010081: LOC115908832
subclass of: SO_0000673
so part of: LOC115908832
location: complement(join(2502009..2502038,2506124..2506771,2506803..2508626))
location: region:2502009-2508626:-1
so has part: feature:2506803-2508626:-1:exon
so has part: feature:2506124-2506771:-1:exon
so has part: feature:2502009-2502038:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2506803-2508626:-1:exon

position:2506803:-1
position: 2506803
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2506124-2506771:-1:exon

position:2506124:-1
position: 2506124
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2506771:-1
position: 2506771
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2502009-2502038:-1:exon

position:2502038:-1
position: 2502038
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC115908832
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 87175
gene: LOC115908832
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protocadherin alpha-8-like
translation: MGERCCAAVVRVLVLQAAWALSGGQVRYSVPEEAKAGTVVGRLAQDLGLEAGEAEARRLRLVAQGRRASVEVSGASGALLVSSRLDREELCGKSAPCALRLEVLLERPLRVFHVQLEVTDINDNAPVFPAARKNLSIAESSVPGSRFPLEGASDADIGANAQLTYTLSPSEHFRIEEENSNSRSKSLFLVLMKSLDRETIPVHRLVLTATDGGRPSLSGTMELMICVLDVNDNAPQFNQSVYNVVLPENASEGMLVARVNATDSDTGIYGELVYEVDTIVPPSAGDLFSIDANNGEIRVRGALDYETVTLYELHIKGTDKGTPPLSGHCKVVVEVLDVNDNAPEVWVTSLSVPVPEDASLGTVVALLSVSDRDSGENGRVRCWVWPASPFGLEATFLGSYSLVLREALDRERVSEYEVEVRAEDGGAPALRASRGLRVPVSDVNDNAPLFAQAVYTVLARENNAAGAELARLWARDPDEAANGRVSYSVWEGGVGVGGAAGSSSSSSGVGWRPASSYVSVDAESGRLWALQPLDYEELQVLQFEVRAVDAGEPPLSGNATVQLFVLDENDNAPALLPPAGSAPEAGGVAAADGGGAGGGGLGVGHAVGVVAKIRAVDADSGYNAWLRYELWEPRGKGPFRVGLYSGEVSTARALDEADGPRQRLLIVVRDHGEPARSATATLSVSLLEPNEAALAAGSSAASAAVSRSAAGVELGPAAASAATNVWLVVAICAVSSLFLLAVVLYGASRWAPRAAVLSGPGPTTLVCASEVGSWSYSQRHSRSLCVADGAAKSDLMVFSPNFPPPPSGPAPKDTQPEPSALLDTRRLARYQKG
SIO_010081: LOC115908832
subclass of: SO_0000673
so part of: LOC115908832
location: complement(join(2502009..2502038,2506124..2506771,2506803..2508626))
location: region:2502009-2508626:-1
so has part: feature:2506803-2508626:-1:exon
so has part: feature:2506124-2506771:-1:exon
so has part: feature:2502009-2502038:-1:exon

XP_030813553.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:2506803-2508626:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2506124-2506771:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2502009-2502038:-1:exon

LOC115908833
type: Gene
subclass of: SO_0000704
RO_0002162: 87175
gene: LOC115908833
note: Derived by automated computational analysis using gene prediction method: Gnomon.
pseudo: true
so part of: sequence
location: complement(2511797..2514488)
location: region:2511797-2514488:-1
so has part: feature:2511797-2514488:-1:exon

115908833
type: Gene
SIO_000068: ncbigene

position:2511797:-1
position: 2511797
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2514488:-1
position: 2514488
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2511797-2514488:-1:exon

LOC115908833
type: Exon
subclass of: SO_0000147
RO_0002162: 87175
gene: LOC115908833
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 19 Proteins, and 76% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC115908833
subclass of: SO_0000673
so part of: LOC115908833
location: complement(2511797..2514488)
location: region:2511797-2514488:-1
so has part: feature:2511797-2514488:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2511797-2514488:-1:exon

LOC115908834
type: Gene
subclass of: SO_0000704
RO_0002162: 87175
gene: LOC115908834
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(2516425..2521150)
location: region:2516425-2521150:-1
so has part: feature:2516425-2521150:-1:exon
subclass of: SO_0000010

115908834
type: Gene
SIO_000068: ncbigene

position:2516425:-1
position: 2516425
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2521150:-1
position: 2521150
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2516425-2521150:-1:exon

LOC115908834
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 87175
gene: LOC115908834
product: protocadherin alpha-2-like
exception: unclassified transcription discrepancy
note: The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: deleted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 Proteins, and 77% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_030957694.1
SIO_010081: LOC115908834
subclass of: SO_0000673
so part of: LOC115908834
location: complement(join(2516425..2516466,2518651..2519379,2519422..2521150))
location: region:2516425-2521150:-1
so has part: feature:2519422-2521150:-1:exon
so has part: feature:2518651-2519379:-1:exon
so has part: feature:2516425-2516466:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2519422-2521150:-1:exon

position:2519422:-1
position: 2519422
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2518651-2519379:-1:exon

position:2518651:-1
position: 2518651
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2519379:-1
position: 2519379
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2516425-2516466:-1:exon

position:2516466:-1
position: 2516466
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC115908834
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 87175
gene: LOC115908834
exception: unclassified translation discrepancy
note: The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: deleted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: LOW QUALITY PROTEIN: protocadherin alpha-2-like
translation: MGERCCAAVVRVLVLQAAWALSGGQVRYSVPEEAKAGTVVGRLAQDLGLEAGEAEARRLRLVAQGRRASVEVSGASGALLVSSRLDREELCGKSAPCALRLEVLLERPLRVFHVQLEVTDINDNAPVFPCRPKKPHFSENSPPGFRFPLEGASDADIGANAQLTYTLSPSEHFSLEVKSKDENKISVLLVLTKPLDRETIPVHRLVLTATDGGRPSLTGTMELVISVLDVNDNAPQFNQSVYKVQLPENTVPGTVFFQLTATDKDEGINQKIYYSFSDAVSAKFQDLFKIDENSGEIRTTGEMDFEDTQSYDLEIEATDKGTPPLSGHCSVEVKLVDVNDNAPEVWVTSLSVPVPEDASLGTVVALLSVSDRDSGENGRVRCWVWPASPFGLEATFLGSYSLVLREALDRERVSEYEVEVRAEDGGAPALRASRGLRVPVSDVNDNAPLFAQAVYTVLARENNAAGAELARLWARDPDEAANGRVSYSVWEGGVAGGGGAAGSSSGVGWRPASSYVSVDAESGRLWALQPLDYEELQVLQFEVRAVDAGEPPLSGNATVQLFVLDENDNAPALLPPAAAALAGAGSESGTLWAWAAWGAPAGQVVAKIRAVDADSGYNAWLRYELWEPRGKGPFRVGLYSGEVSTARALDEADGPRQRLLIVVRDHGEPARSATATLSVSLLEPNEAALAAGSSAASAAVSRSAAGVELGPAAASAATNVWLVVAICAVSSLFLLAVVLYGASRWAPRAAVLSGPGPTTLVCASEVGSWSYSQRHSRSLCVADGAAKSDLMVFSPNFPPPPPAPAAKDTQPEPSALLDTWQCVTVDEMQMVK
SIO_010081: LOC115908834
subclass of: SO_0000673
so part of: LOC115908834
location: complement(join(2516425..2516466,2518651..2519379,2519422..2521150))
location: region:2516425-2521150:-1
so has part: feature:2519422-2521150:-1:exon
so has part: feature:2518651-2519379:-1:exon
so has part: feature:2516425-2516466:-1:exon

XP_030813554.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:2519422-2521150:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2518651-2519379:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2516425-2516466:-1:exon

LOC115908836
type: Gene
subclass of: SO_0000704
RO_0002162: 87175
gene: LOC115908836
note: Derived by automated computational analysis using gene prediction method: Gnomon.
pseudo: true
so part of: sequence
location: complement(2526989..2529708)
location: region:2526989-2529708:-1
so has part: feature:2526989-2529708:-1:exon

115908836
type: Gene
SIO_000068: ncbigene

position:2526989:-1
position: 2526989
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2529708:-1
position: 2529708
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2526989-2529708:-1:exon

LOC115908836
type: Exon
subclass of: SO_0000147
RO_0002162: 87175
gene: LOC115908836
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 32% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC115908836
subclass of: SO_0000673
so part of: LOC115908836
location: complement(2526989..2528113)
location: region:2526989-2528113:-1
so has part: feature:2526989-2528113:-1:exon

position:2528113:-1
position: 2528113
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2526989-2528113:-1:exon

LOC115908836
type: Exon
subclass of: SO_0000147
RO_0002162: 87175
gene: LOC115908836
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 32% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC115908836
subclass of: SO_0000673
so part of: LOC115908836
location: complement(2528178..2529708)
location: region:2528178-2529708:-1
so has part: feature:2528178-2529708:-1:exon

position:2528178:-1
position: 2528178
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2528178-2529708:-1:exon

LOC115908838
type: Gene
subclass of: SO_0000704
RO_0002162: 87175
gene: LOC115908838
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(2534559..2537177)
location: region:2534559-2537177:-1
so has part: feature:2534559-2537177:-1:exon
subclass of: SO_0000010

115908838
type: Gene
SIO_000068: ncbigene

position:2534559:-1
position: 2534559
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2537177:-1
position: 2537177
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2534559-2537177:-1:exon

LOC115908838
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 87175
gene: LOC115908838
product: protocadherin alpha-6-like
exception: unclassified transcription discrepancy
note: The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: deleted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 47% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_030957697.1
SIO_010081: LOC115908838
subclass of: SO_0000673
so part of: LOC115908838
location: complement(join(2534559..2534612,2534672..2535367,2535432..2535636,2535687..2537177))
location: region:2534559-2537177:-1
so has part: feature:2535687-2537177:-1:exon
so has part: feature:2535432-2535636:-1:exon
so has part: feature:2534672-2535367:-1:exon
so has part: feature:2534559-2534612:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2535687-2537177:-1:exon

position:2535687:-1
position: 2535687
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2535432-2535636:-1:exon

position:2535432:-1
position: 2535432
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2535636:-1
position: 2535636
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2534672-2535367:-1:exon

position:2534672:-1
position: 2534672
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2535367:-1
position: 2535367
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:2534559-2534612:-1:exon

position:2534612:-1
position: 2534612
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC115908838
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 87175
gene: LOC115908838
exception: unclassified translation discrepancy
note: The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: deleted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: LOW QUALITY PROTEIN: protocadherin alpha-6-like
translation: MGERCCAAVVRVLVLQAAWALSGGQVRYSVPEEAKAGTVVGRLAQDLGLEAGEAEARRLRLVAQGRRASVEVSGASGALLVSSRLDREELCGKSAPCALRLEVLLERPLRVFHVQLEVTDINDNAPIFPAARKNLSITEFTTLPGSRFPLEGASDADIGMNAQLTYTLSPSENFSWIYKKRRRKSLFLVLRKSLDRETIAVHRLVLTATDGGRPSLTGTMELVISVLDVNDNMPQFNQSVYKVQVPENSERGTLVIRLNATDLDEGSNSNISYSLQMLSQQDGRDVFRIDRTSGEIRLTGDLDFEDVNLYRLQVDATDKGTPPLSGHCKVVVEVLDVNDNAPEVWVTSLSVPVPEDASLGTVVALLSVSDRDSGENGRVRCWVWPASPFGLEATFLGSYSLVLREALDRERVSEYEVEVRAEDGGAPALRASRGLRVPVSDVNDNAPLFAQAVYTVLARENNAAGAELARLWARDPDEAANGRVSYSVWEGGAAAGPYVSVDAESGRLWALQPLDYEELQVLQFEVRAVDAGEPPLSGNATVQLFVLDENDNAPALLPPAGSAPESGTLWAWAAWGAPAGQVVAKIRAVDADSGYNAWLRYELWEPRGKGPFRVGLYSGEVSTARALDEADGPRQRLLIVVRDHGEPARSATATLSVSLLEPNEAALAAGSSAASSAVSRSAAGVELGPAAASAATNVWLVVAICAVSSLFLLAVVLYGASRWAPRAAVLSGPGPTTLVCASEVGSWSYSQRHSRSLCVADGAAKSDLMVFSPNFPPPPPAPAAKDTQPEPSALLDTVRRLCGSPGSLPTGRER
SIO_010081: LOC115908838
subclass of: SO_0000673
so part of: LOC115908838
location: complement(join(2534559..2534612,2534672..2535367,2535432..2535636,2535687..2537177))
location: region:2534559-2537177:-1
so has part: feature:2535687-2537177:-1:exon
so has part: feature:2535432-2535636:-1:exon
so has part: feature:2534672-2535367:-1:exon
so has part: feature:2534559-2534612:-1:exon

XP_030813557.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:2535687-2537177:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2535432-2535636:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2534672-2535367:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2534559-2534612:-1:exon

LOC115908758
type: Gene
subclass of: SO_0000704
RO_0002162: 87175
gene: LOC115908758
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(2555143..2559625)
location: region:2555143-2559625:-1
so has part: feature:2555143-2559625:-1:exon
subclass of: SO_0000010

115908758
type: Gene
SIO_000068: ncbigene

position:2555143:-1
position: 2555143
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2559625:-1
position: 2559625
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2555143-2559625:-1:exon

LOC115908758
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 87175
gene: LOC115908758
product: protocadherin-10-like
exception: unclassified transcription discrepancy
note: The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: deleted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 25 Proteins, and 73% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_030957593.1
SIO_010081: LOC115908758
subclass of: SO_0000673
so part of: LOC115908758
location: complement(join(2555143..2555549,2555760..2555848,2555952..2556010,2557150..2559625))
location: region:2555143-2559625:-1
so has part: feature:2557150-2559625:-1:exon
so has part: feature:2555952-2556010:-1:exon
so has part: feature:2555760-2555848:-1:exon
so has part: feature:2555143-2555549:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2557150-2559625:-1:exon

position:2557150:-1
position: 2557150
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2555952-2556010:-1:exon

position:2555952:-1
position: 2555952
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2556010:-1
position: 2556010
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2555760-2555848:-1:exon

position:2555760:-1
position: 2555760
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2555848:-1
position: 2555848
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:2555143-2555549:-1:exon

position:2555549:-1
position: 2555549
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC115908758
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 87175
gene: LOC115908758
exception: unclassified translation discrepancy
note: The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: deleted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: LOW QUALITY PROTEIN: protocadherin-10-like
translation: MGAGAGSGRGQLFLRSLLFLLLAGPPARGQLRYAVPEELEHGAFVANLGEDLGLDVSTLSARRFRIVSRAGARQHLEVNLENGILFVNERIDREEVCEAGGTCLLHLQLLVESPLELYRVEVEVLDINDHAPTFPWQEYVLEVAESAVLGARFPLESAQDPDVGTNSVHTYRLSPNGFFSLEVQTRSDASKFAELVLERALDREQQRVHRVLLTALDGGVPERSGTAHILVTVLDANDNVPAFDQPSYGVSLPEDAPAGTLVIQLNATDLDEGPNGEIEYSFSGHAPPRVRELFHVEPRSGQVLLKGRLDYERASLHELYVQAKDRGPSAVAVHCRVLVHLLDVNDNAPEVTLTSVSTPVLEDAPPGTVIAVISVQDRDSGDNGRVSCEVGPNVPFELRSSFRNYYTLVTTQALDREVVPEYNVSITARDMGSPALLTRSILTIPVSDVNDNAPRFLQPSYSVYVMENNAPGASICSVSALDPDCQQNAYLSYSIADGHIHGMPVGTYVSINSDSGHMYALRSLDYEQIRSFQIQVQAQDAGFPPLSANVTVHIFVLDQNDNAPVIVSPMPRNGSVATELVPRSARPGYLVGTVSAVDADRGLNSRLSYQLLQATDFTLFSVAPDTGELRTLRSFLEQDASRQQLVVQVRDGGQPALSATVSLLLSVVETMPQTLSDFSEFSLPPEVSSSSPLTLYLLVSLGSISFTFLLAILILTAIRCRGERRSRQGDSCSPPRCRCCPGSRPSSDGLKTSNLTAQPPAGTTAATCLDVPAGGPPGYCYKVCLGPESAQSDFMFLKPCSPPRNNEKDPGKRSRPEQHLQVSKEAKQPNTDWLPPSTQRPALKSSQSLEDVGEIRRALQKEHERLCTLVTPVSEFQKASAGPNSIWTPHYSPLYPALDYQHNVYIPGTPTLLSSKDGPLFSGRENKNSFSTFGKRKKMTTYCDMHDSVVINNDLK
SIO_010081: LOC115908758
subclass of: SO_0000673
so part of: LOC115908758
location: complement(join(2555302..2555549,2555760..2555848,2555952..2556010,2557150..2559625))
location: region:2555302-2559625:-1
so has part: feature:2557150-2559625:-1:exon
so has part: feature:2555952-2556010:-1:exon
so has part: feature:2555760-2555848:-1:exon
so has part: feature:2555302-2555549:-1:exon

XP_030813453.1
type: Protein
SIO_000068: ncbiprotein

position:2555302:-1
position: 2555302
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2557150-2559625:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2555952-2556010:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2555760-2555848:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2555302-2555549:-1:exon

ZMAT2
type: Gene
subclass of: SO_0000704
RO_0002162: 87175
gene: ZMAT2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(2568817..2579308)
location: region:2568817-2579308:-1
so has part: feature:2568817-2579308:-1:exon
subclass of: SO_0000010

115908759
type: Gene
SIO_000068: ncbigene

position:2568817:-1
position: 2568817
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2579308:-1
position: 2579308
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2568817-2579308:-1:exon

ZMAT2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 87175
gene: ZMAT2
product: zinc finger matrin-type 2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 mRNAs, 42 ESTs, 6 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
transcript id: XM_030957594.1
SIO_010081: ZMAT2
subclass of: SO_0000673
so part of: ZMAT2
location: complement(join(2568817..2570229,2571704..2571849,2573585..2573658,2574685..2574808,2575268..2575361,2579232..2579308))
location: region:2568817-2579308:-1
so has part: feature:2579232-2579308:-1:exon
so has part: feature:2575268-2575361:-1:exon
so has part: feature:2574685-2574808:-1:exon
so has part: feature:2573585-2573658:-1:exon
so has part: feature:2571704-2571849:-1:exon
so has part: feature:2568817-2570229:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2579232-2579308:-1:exon

position:2579232:-1
position: 2579232
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2575268-2575361:-1:exon

position:2575268:-1
position: 2575268
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2575361:-1
position: 2575361
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2574685-2574808:-1:exon

position:2574685:-1
position: 2574685
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2574808:-1
position: 2574808
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:2573585-2573658:-1:exon

position:2573585:-1
position: 2573585
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2573658:-1
position: 2573658
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:2571704-2571849:-1:exon

position:2571704:-1
position: 2571704
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2571849:-1
position: 2571849
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:2568817-2570229:-1:exon

position:2570229:-1
position: 2570229
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

ZMAT2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 87175
gene: ZMAT2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: zinc finger matrin-type protein 2
translation: MASGSGTKNLDFRRKWDKDEYEKLAEKRLTEEREKKDGKPAQPVKRELLRHRDYKVDLESKLGKTIVITKTTPQSEMGGYYCNVCDCVVKDSINFLDHINGKKHQRNLGMSMRVERSTLDQVKKRFEVNKKKMEEKQKDYDFEERMKELREEEEKAKAYKKEKQREKKRRAEEDLTF
SIO_010081: ZMAT2
subclass of: SO_0000673
so part of: ZMAT2
location: complement(join(2570152..2570229,2571704..2571849,2573585..2573658,2574685..2574808,2575268..2575361,2579232..2579249))
location: region:2570152-2579249:-1
so has part: feature:2579232-2579249:-1:exon
so has part: feature:2575268-2575361:-1:exon
so has part: feature:2574685-2574808:-1:exon
so has part: feature:2573585-2573658:-1:exon
so has part: feature:2571704-2571849:-1:exon
so has part: feature:2570152-2570229:-1:exon

XP_030813454.1
type: Protein
SIO_000068: ncbiprotein

position:2570152:-1
position: 2570152
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2579249:-1
position: 2579249
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2579232-2579249:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2575268-2575361:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2574685-2574808:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2573585-2573658:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2571704-2571849:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2570152-2570229:-1:exon

LOC115908651
type: Gene
subclass of: SO_0000704
RO_0002162: 87175
gene: LOC115908651
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 2579363..2585028
location: region:2579363-2585028:1
so has part: feature:2579363-2585028:1:exon
subclass of: SO_0000010

115908651
type: Gene
SIO_000068: ncbigene

position:2579363:1
position: 2579363
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2585028:1
position: 2585028
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2579363-2585028:1:exon

LOC115908651
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 87175
gene: LOC115908651
product: histidine--tRNA ligase, cytoplasmic-like, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XM_030957403.1
SIO_010081: LOC115908651
subclass of: SO_0000673
so part of: LOC115908651
location: join(2579363..2579560,2579649..2580188,2580968..2581093,2581238..2581345,2581784..2581882,2582196..2582289,2582426..2582553,2582637..2582879,2583603..2583719,2584030..2584176,2584384..2585028)
location: region:2579363-2585028:1
so has part: feature:2579363-2579560:1:exon
so has part: feature:2579649-2580188:1:exon
so has part: feature:2580968-2581093:1:exon
so has part: feature:2581238-2581345:1:exon
so has part: feature:2581784-2581882:1:exon
so has part: feature:2582196-2582289:1:exon
so has part: feature:2582426-2582553:1:exon
so has part: feature:2582637-2582879:1:exon
so has part: feature:2583603-2583719:1:exon
so has part: feature:2584030-2584176:1:exon
so has part: feature:2584384-2585028:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2579363-2579560:1:exon

position:2579560:1
position: 2579560
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2579649-2580188:1:exon

position:2579649:1
position: 2579649
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2580188:1
position: 2580188
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2580968-2581093:1:exon

position:2580968:1
position: 2580968
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2581093:1
position: 2581093
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:2581238-2581345:1:exon

position:2581238:1
position: 2581238
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2581345:1
position: 2581345
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:2581784-2581882:1:exon

position:2581784:1
position: 2581784
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2581882:1
position: 2581882
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:2582196-2582289:1:exon

position:2582196:1
position: 2582196
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2582289:1
position: 2582289
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:2582426-2582553:1:exon

position:2582426:1
position: 2582426
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2582553:1
position: 2582553
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:2582637-2582879:1:exon

position:2582637:1
position: 2582637
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2582879:1
position: 2582879
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:2583603-2583719:1:exon

position:2583603:1
position: 2583603
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2583719:1
position: 2583719
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:2584030-2584176:1:exon

position:2584030:1
position: 2584030
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2584176:1
position: 2584176
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:2584384-2585028:1:exon

position:2584384:1
position: 2584384
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC115908651
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 87175
gene: LOC115908651
product: histidine--tRNA ligase, cytoplasmic-like, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 25 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XM_030957404.1
SIO_010081: LOC115908651
subclass of: SO_0000673
so part of: LOC115908651
location: join(2579363..2579560,2579649..2579768,2580093..2580188,2580968..2581093,2581238..2581345,2581784..2581882,2582196..2582289,2582426..2582553,2582637..2582879,2583603..2583719,2584030..2584176,2584384..2585028)
location: region:2579363-2585028:1
so has part: feature:2579363-2579560:1:exon
so has part: feature:2579649-2579768:1:exon
so has part: feature:2580093-2580188:1:exon
so has part: feature:2580968-2581093:1:exon
so has part: feature:2581238-2581345:1:exon
so has part: feature:2581784-2581882:1:exon
so has part: feature:2582196-2582289:1:exon
so has part: feature:2582426-2582553:1:exon
so has part: feature:2582637-2582879:1:exon
so has part: feature:2583603-2583719:1:exon
so has part: feature:2584030-2584176:1:exon
so has part: feature:2584384-2585028:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2579363-2579560:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2579649-2579768:1:exon

position:2579768:1
position: 2579768
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2580093-2580188:1:exon

position:2580093:1
position: 2580093
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:2580968-2581093:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2581238-2581345:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2581784-2581882:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2582196-2582289:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2582426-2582553:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2582637-2582879:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2583603-2583719:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:2584030-2584176:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:2584384-2585028:1:exon

LOC115908651
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 87175
gene: LOC115908651
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: histidine--tRNA ligase, cytoplasmic-like isoform X1
translation: MLRLGPFAAARCLPAGPRLGPLCLAGNRGSFARSWLPVGDRGPLSRQVRAAAGGERPPVLKTPKGTRDHAPAQAALRERLLSAVVSCFKRHGAAAIDTPVLELRVRRAGSSLGPWCGERDRPGAVGSLCSLPWDRGAPLPPGLPPSGARPGGEGRWTFTLGSFWRGRGGGLRSEGAGGVCVMPGSWGPSSVPHLGDPSAQSHPVTSHCVPPQETLVGKYGEGAKLIYELKDQGGELLALRYDLTVPFARYLAMNKITKMKRYHVAKVYRRDNPATTRGRYREFYQCDFDIAGQFDPMIPDAECLKIVHEILSDLQLGDFVIKVNDRRILNGVFAVCGVPESQFIPACCTVDKLDKVPWEEVRSEMVAEKGLSPEAADRIGEYVQLHGGLDLIEQLLQDPKLSQNKVAKEGLGDMKLLFEYLTLFGITGKISFDLSLARGLDYYTGVIFEAVLLQQDNKHLEEPLSIGSVAGGGRYDGLVGMFDAKGRKVPCVGVSIGIERIFSILEQRLEASGEKLRTTETQVLVATPQKHLLAARMKLISELWDAGIKAEMLYKKDPKLLKQLQYCEDTGIPLAAIVGEQELADGVVKLRDVATRKEVDIPREKLIDEIRRRLEP
SIO_010081: LOC115908651
subclass of: SO_0000673
so part of: LOC115908651
location: join(2579369..2579560,2579649..2580188,2580968..2581093,2581238..2581345,2581784..2581882,2582196..2582289,2582426..2582553,2582637..2582879,2583603..2583719,2584030..2584176,2584384..2584440)
location: region:2579369-2584440:1
so has part: feature:2579369-2579560:1:exon
so has part: feature:2579649-2580188:1:exon
so has part: feature:2580968-2581093:1:exon
so has part: feature:2581238-2581345:1:exon
so has part: feature:2581784-2581882:1:exon
so has part: feature:2582196-2582289:1:exon
so has part: feature:2582426-2582553:1:exon
so has part: feature:2582637-2582879:1:exon
so has part: feature:2583603-2583719:1:exon
so has part: feature:2584030-2584176:1:exon
so has part: feature:2584384-2584440:1:exon

XP_030813263.1
type: Protein
SIO_000068: ncbiprotein

position:2579369:1
position: 2579369
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2584440:1
position: 2584440
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2579369-2579560:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2579649-2580188:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2580968-2581093:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2581238-2581345:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2581784-2581882:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2582196-2582289:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2582426-2582553:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2582637-2582879:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2583603-2583719:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2584030-2584176:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:2584384-2584440:1:exon

LOC115908651
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 87175
gene: LOC115908651
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: histidine--tRNA ligase, cytoplasmic-like isoform X2
translation: MLRLGPFAAARCLPAGPRLGPLCLAGNRGSFARSWLPVGDRGPLSRQVRAAAGGERPPVLKTPKGTRDHAPAQAALRERLLSAVVSCFKRHGAAAIDTPVLELRETLVGKYGEGAKLIYELKDQGGELLALRYDLTVPFARYLAMNKITKMKRYHVAKVYRRDNPATTRGRYREFYQCDFDIAGQFDPMIPDAECLKIVHEILSDLQLGDFVIKVNDRRILNGVFAVCGVPESQFIPACCTVDKLDKVPWEEVRSEMVAEKGLSPEAADRIGEYVQLHGGLDLIEQLLQDPKLSQNKVAKEGLGDMKLLFEYLTLFGITGKISFDLSLARGLDYYTGVIFEAVLLQQDNKHLEEPLSIGSVAGGGRYDGLVGMFDAKGRKVPCVGVSIGIERIFSILEQRLEASGEKLRTTETQVLVATPQKHLLAARMKLISELWDAGIKAEMLYKKDPKLLKQLQYCEDTGIPLAAIVGEQELADGVVKLRDVATRKEVDIPREKLIDEIRRRLEP
SIO_010081: LOC115908651
subclass of: SO_0000673
so part of: LOC115908651
location: join(2579369..2579560,2579649..2579768,2580093..2580188,2580968..2581093,2581238..2581345,2581784..2581882,2582196..2582289,2582426..2582553,2582637..2582879,2583603..2583719,2584030..2584176,2584384..2584440)
location: region:2579369-2584440:1
so has part: feature:2579369-2579560:1:exon
so has part: feature:2579649-2579768:1:exon
so has part: feature:2580093-2580188:1:exon
so has part: feature:2580968-2581093:1:exon
so has part: feature:2581238-2581345:1:exon
so has part: feature:2581784-2581882:1:exon
so has part: feature:2582196-2582289:1:exon
so has part: feature:2582426-2582553:1:exon
so has part: feature:2582637-2582879:1:exon
so has part: feature:2583603-2583719:1:exon
so has part: feature:2584030-2584176:1:exon
so has part: feature:2584384-2584440:1:exon

XP_030813264.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:2579369-2579560:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2579649-2579768:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2580093-2580188:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2580968-2581093:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2581238-2581345:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2581784-2581882:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2582196-2582289:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2582426-2582553:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2582637-2582879:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2583603-2583719:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:2584030-2584176:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:2584384-2584440:1:exon

LOC115908651
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 87175
gene: LOC115908651
product: histidine--tRNA ligase, cytoplasmic-like, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XM_030957405.1
SIO_010081: LOC115908651
subclass of: SO_0000673
so part of: LOC115908651
location: join(2580060..2581089,2581238..2581345,2581784..2581882,2582196..2582289,2582426..2582553,2582637..2582879,2583603..2583719,2584030..2584176,2584384..2585028)
location: region:2580060-2585028:1
so has part: feature:2580060-2581089:1:exon
so has part: feature:2581238-2581345:1:exon
so has part: feature:2581784-2581882:1:exon
so has part: feature:2582196-2582289:1:exon
so has part: feature:2582426-2582553:1:exon
so has part: feature:2582637-2582879:1:exon
so has part: feature:2583603-2583719:1:exon
so has part: feature:2584030-2584176:1:exon
so has part: feature:2584384-2585028:1:exon

position:2580060:1
position: 2580060
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2580060-2581089:1:exon

position:2581089:1
position: 2581089
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2581238-2581345:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2581784-2581882:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2582196-2582289:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2582426-2582553:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2582637-2582879:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2583603-2583719:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2584030-2584176:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2584384-2585028:1:exon

LOC115908651
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 87175
gene: LOC115908651
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: histidine--tRNA ligase, cytoplasmic-like isoform X3
translation: MTLQRTPQESHHDCEKNWEAAGKGKGQWEALGFSFYSSGDLHVPILNSWGPGALCSLPGHEQDHQDEALPRGQGVQEGQPSHHPGPLPRVLPDFDIAGQFDPMIPDAECLKIVHEILSDLQLGDFVIKVNDRRILNGVFAVCGVPESQFIPACCTVDKLDKVPWEEVRSEMVAEKGLSPEAADRIGEYVQLHGGLDLIEQLLQDPKLSQNKVAKEGLGDMKLLFEYLTLFGITGKISFDLSLARGLDYYTGVIFEAVLLQQDNKHLEEPLSIGSVAGGGRYDGLVGMFDAKGRKVPCVGVSIGIERIFSILEQRLEASGEKLRTTETQVLVATPQKHLLAARMKLISELWDAGIKAEMLYKKDPKLLKQLQYCEDTGIPLAAIVGEQELADGVVKLRDVATRKEVDIPREKLIDEIRRRLEP
SIO_010081: LOC115908651
subclass of: SO_0000673
so part of: LOC115908651
location: join(2580814..2581089,2581238..2581345,2581784..2581882,2582196..2582289,2582426..2582553,2582637..2582879,2583603..2583719,2584030..2584176,2584384..2584440)
location: region:2580814-2584440:1
so has part: feature:2580814-2581089:1:exon
so has part: feature:2581238-2581345:1:exon
so has part: feature:2581784-2581882:1:exon
so has part: feature:2582196-2582289:1:exon
so has part: feature:2582426-2582553:1:exon
so has part: feature:2582637-2582879:1:exon
so has part: feature:2583603-2583719:1:exon
so has part: feature:2584030-2584176:1:exon
so has part: feature:2584384-2584440:1:exon

XP_030813265.1
type: Protein
SIO_000068: ncbiprotein

position:2580814:1
position: 2580814
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2580814-2581089:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2581238-2581345:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2581784-2581882:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2582196-2582289:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2582426-2582553:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2582637-2582879:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2583603-2583719:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2584030-2584176:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2584384-2584440:1:exon

LOC115908652
type: Gene
subclass of: SO_0000704
RO_0002162: 87175
gene: LOC115908652
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 2585114..2597973
location: region:2585114-2597973:1
so has part: feature:2585114-2597973:1:exon
subclass of: SO_0000010

115908652
type: Gene
SIO_000068: ncbigene

position:2585114:1
position: 2585114
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2597973:1
position: 2597973
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2585114-2597973:1:exon

LOC115908652
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 87175
gene: LOC115908652
product: histidine--tRNA ligase, cytoplasmic
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 mRNAs, 19 ESTs, 23 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
transcript id: XM_030957407.1
SIO_010081: LOC115908652
subclass of: SO_0000673
so part of: LOC115908652
location: join(2585114..2585221,2585908..2585997,2587621..2587740,2587918..2588013,2588727..2588852,2591481..2591588,2593241..2593339,2594370..2594463,2594601..2594728,2594810..2595052,2596202..2596318,2596683..2596829,2597467..2597973)
location: region:2585114-2597973:1
so has part: feature:2585114-2585221:1:exon
so has part: feature:2585908-2585997:1:exon
so has part: feature:2587621-2587740:1:exon
so has part: feature:2587918-2588013:1:exon
so has part: feature:2588727-2588852:1:exon
so has part: feature:2591481-2591588:1:exon
so has part: feature:2593241-2593339:1:exon
so has part: feature:2594370-2594463:1:exon
so has part: feature:2594601-2594728:1:exon
so has part: feature:2594810-2595052:1:exon
so has part: feature:2596202-2596318:1:exon
so has part: feature:2596683-2596829:1:exon
so has part: feature:2597467-2597973:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2585114-2585221:1:exon

position:2585221:1
position: 2585221
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2585908-2585997:1:exon

position:2585908:1
position: 2585908
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2585997:1
position: 2585997
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2587621-2587740:1:exon

position:2587621:1
position: 2587621
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2587740:1
position: 2587740
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:2587918-2588013:1:exon

position:2587918:1
position: 2587918
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2588013:1
position: 2588013
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:2588727-2588852:1:exon

position:2588727:1
position: 2588727
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2588852:1
position: 2588852
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:2591481-2591588:1:exon

position:2591481:1
position: 2591481
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2591588:1
position: 2591588
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:2593241-2593339:1:exon

position:2593241:1
position: 2593241
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2593339:1
position: 2593339
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:2594370-2594463:1:exon

position:2594370:1
position: 2594370
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2594463:1
position: 2594463
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:2594601-2594728:1:exon

position:2594601:1
position: 2594601
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2594728:1
position: 2594728
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:2594810-2595052:1:exon

position:2594810:1
position: 2594810
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2595052:1
position: 2595052
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:2596202-2596318:1:exon

position:2596202:1
position: 2596202
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2596318:1
position: 2596318
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:2596683-2596829:1:exon

position:2596683:1
position: 2596683
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2596829:1
position: 2596829
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:2597467-2597973:1:exon

position:2597467:1
position: 2597467
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC115908652
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 87175
gene: LOC115908652
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: histidine--tRNA ligase, cytoplasmic
translation: MAEEAAVRAQAETVRRLKQDKADADEIAKEVAKLLEMKAQLGTDEGKHKFVLKTPKGTRDFGPKEMAIRERAFKAIISCFKRHGAEVIDTPVFELKETLTGKYGEDSKLIYDLKDQGGELLSLRYDLTVPFARYLAMNKITNIKRYHIAKVYRRDNPAMTRGRYREFYQCDFDIAGQFDPMIPDAECLKIVHEILSDLQLGDFVIKVNDRRILDGMFAVCGVPDSKFRTICSSVDKLDKVPWEEVRSEMVAEKGLSPEAADRIGEYVQLHGGLDLIEQLLQDPKLSQNKVAKEGLGDMKLLFEYLTLFGITGKISFDLSLARGLDYYTGVIFEAVLLQQDNEHLEEPLSVGSVAGGGRYDGLVGMFDAKGRKVPCVGVSIGIERIFSILEQRLEASEEKIRTTETQVLVASAQKKLLEERLKLISELWDAGIKAEMLYKKNPKLLNQLQYCEETGIPLVAIVGEQELKDGVVKLRIVATREEVNVRRESLVEEIRIRTSQC
SIO_010081: LOC115908652
subclass of: SO_0000673
so part of: LOC115908652
location: join(2585144..2585221,2585908..2585997,2587621..2587740,2587918..2588013,2588727..2588852,2591481..2591588,2593241..2593339,2594370..2594463,2594601..2594728,2594810..2595052,2596202..2596318,2596683..2596829,2597467..2597526)
location: region:2585144-2597526:1
so has part: feature:2585144-2585221:1:exon
so has part: feature:2585908-2585997:1:exon
so has part: feature:2587621-2587740:1:exon
so has part: feature:2587918-2588013:1:exon
so has part: feature:2588727-2588852:1:exon
so has part: feature:2591481-2591588:1:exon
so has part: feature:2593241-2593339:1:exon
so has part: feature:2594370-2594463:1:exon
so has part: feature:2594601-2594728:1:exon
so has part: feature:2594810-2595052:1:exon
so has part: feature:2596202-2596318:1:exon
so has part: feature:2596683-2596829:1:exon
so has part: feature:2597467-2597526:1:exon

XP_030813267.1
type: Protein
SIO_000068: ncbiprotein

position:2585144:1
position: 2585144
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2597526:1
position: 2597526
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2585144-2585221:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2585908-2585997:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2587621-2587740:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2587918-2588013:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2588727-2588852:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2591481-2591588:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2593241-2593339:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2594370-2594463:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2594601-2594728:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2594810-2595052:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:2596202-2596318:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:2596683-2596829:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:2597467-2597526:1:exon

APBB3
type: Gene
subclass of: SO_0000704
RO_0002162: 87175
gene: APBB3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 2674291..2678636
location: region:2674291-2678636:1
so has part: feature:2674291-2678636:1:exon
subclass of: SO_0000010

115908582
type: Gene
SIO_000068: ncbigene

position:2674291:1
position: 2674291
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2678636:1
position: 2678636
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2674291-2678636:1:exon

APBB3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 87175
gene: APBB3
product: amyloid beta precursor protein binding family B member 3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 ESTs, 3 Proteins, and 89% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_030957288.1
SIO_010081: APBB3
subclass of: SO_0000673
so part of: APBB3
location: join(2674291..2674394,2675321..2675511,2675845..2675921,2676174..2676231,2676412..2676552,2676895..2677022,2677138..2677143,2677227..2677341,2677427..2677514,2677670..2677753,2677891..2678006,2678133..2678315,2678415..2678636)
location: region:2674291-2678636:1
so has part: feature:2674291-2674394:1:exon
so has part: feature:2675321-2675511:1:exon
so has part: feature:2675845-2675921:1:exon
so has part: feature:2676174-2676231:1:exon
so has part: feature:2676412-2676552:1:exon
so has part: feature:2676895-2677022:1:exon
so has part: feature:2677138-2677143:1:exon
so has part: feature:2677227-2677341:1:exon
so has part: feature:2677427-2677514:1:exon
so has part: feature:2677670-2677753:1:exon
so has part: feature:2677891-2678006:1:exon
so has part: feature:2678133-2678315:1:exon
so has part: feature:2678415-2678636:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2674291-2674394:1:exon

position:2674394:1
position: 2674394
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2675321-2675511:1:exon

position:2675321:1
position: 2675321
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2675511:1
position: 2675511
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2675845-2675921:1:exon

position:2675845:1
position: 2675845
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2675921:1
position: 2675921
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:2676174-2676231:1:exon

position:2676174:1
position: 2676174
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2676231:1
position: 2676231
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:2676412-2676552:1:exon

position:2676412:1
position: 2676412
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2676552:1
position: 2676552
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:2676895-2677022:1:exon

position:2676895:1
position: 2676895
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2677022:1
position: 2677022
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:2677138-2677143:1:exon

position:2677138:1
position: 2677138
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2677143:1
position: 2677143
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:2677227-2677341:1:exon

position:2677227:1
position: 2677227
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2677341:1
position: 2677341
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:2677427-2677514:1:exon

position:2677427:1
position: 2677427
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2677514:1
position: 2677514
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:2677670-2677753:1:exon

position:2677670:1
position: 2677670
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2677753:1
position: 2677753
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:2677891-2678006:1:exon

position:2677891:1
position: 2677891
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2678006:1
position: 2678006
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:2678133-2678315:1:exon

position:2678133:1
position: 2678133
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2678315:1
position: 2678315
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:2678415-2678636:1:exon

position:2678415:1
position: 2678415
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

APBB3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 87175
gene: APBB3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: amyloid-beta A4 precursor protein-binding family B member 3
translation: MLGKDYMLAIVLVNCDDNLWSDQSLETDPDLPPGWRKICDSLGTYYWHVPTGTTQWQHPARSTGPGGHTEADGDDALQGRECQGPAAKHSAKDRPIPSPMASLSRRHSLSWHGDDFQHSTEPGSKCFAVRSLGWVEIPEEDLAPGKSSIAVNNCIQQLSNSKGQGSAENQGEGQDLVMILKKDTMSLVDPLDRSLIHRQPILNIRVWGVGCDNGRDRDFAFVASDKDTCVLKCHVFHCNVPAKGIAKALHEMCSKIVAERAVASSRLPRAATLEPISAEDLPLQVDILEAVRQSMQTYEALYIGSLPVPRAMGMDVLNEAIEKLTRRPGRENWTPSLIYVSDTAMRVHPAQEPEEAAHIWECQVRYVTFLGVGRDAHTFALIVDTGRRFQCAAFWCEPDAGTISEAVQAACMVQYQKCLVAAAPGAKAKSAAGRGRAGPAASGDAARGAAKAGEAAAGAGAGARKRGLFSFLEVFRLRRALLHSP
SIO_010081: APBB3
subclass of: SO_0000673
so part of: APBB3
location: join(2674346..2674394,2675321..2675511,2675845..2675921,2676174..2676231,2676412..2676552,2676895..2677022,2677138..2677143,2677227..2677341,2677427..2677514,2677670..2677753,2677891..2678006,2678133..2678315,2678415..2678636)
location: region:2674346-2678636:1
so has part: feature:2674346-2674394:1:exon
so has part: feature:2675321-2675511:1:exon
so has part: feature:2675845-2675921:1:exon
so has part: feature:2676174-2676231:1:exon
so has part: feature:2676412-2676552:1:exon
so has part: feature:2676895-2677022:1:exon
so has part: feature:2677138-2677143:1:exon
so has part: feature:2677227-2677341:1:exon
so has part: feature:2677427-2677514:1:exon
so has part: feature:2677670-2677753:1:exon
so has part: feature:2677891-2678006:1:exon
so has part: feature:2678133-2678315:1:exon
so has part: feature:2678415-2678636:1:exon

XP_030813148.1
type: Protein
SIO_000068: ncbiprotein

position:2674346:1
position: 2674346
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2674346-2674394:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2675321-2675511:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2675845-2675921:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2676174-2676231:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2676412-2676552:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2676895-2677022:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2677138-2677143:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2677227-2677341:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2677427-2677514:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2677670-2677753:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:2677891-2678006:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:2678133-2678315:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:2678415-2678636:1:exon

SRA1
type: Gene
subclass of: SO_0000704
RO_0002162: 87175
gene: SRA1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 2678831..2680483
location: region:2678831-2680483:1
so has part: feature:2678831-2680483:1:exon
subclass of: SO_0000010

115908881
type: Gene
SIO_000068: ncbigene

position:2678831:1
position: 2678831
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2680483:1
position: 2680483
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2678831-2680483:1:exon

SRA1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 87175
gene: SRA1
product: steroid receptor RNA activator 1
exception: unclassified transcription discrepancy
note: The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: inserted 2 bases in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins, and 81% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_030957767.1
SIO_010081: SRA1
subclass of: SO_0000673
so part of: SRA1
location: join(2678831..2678855,2679097..2679220,2679449..2679621,2679805..2679913,2680024..2680483)
location: region:2678831-2680483:1
so has part: feature:2678831-2678855:1:exon
so has part: feature:2679097-2679220:1:exon
so has part: feature:2679449-2679621:1:exon
so has part: feature:2679805-2679913:1:exon
so has part: feature:2680024-2680483:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2678831-2678855:1:exon

position:2678855:1
position: 2678855
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2679097-2679220:1:exon

position:2679097:1
position: 2679097
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2679220:1
position: 2679220
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2679449-2679621:1:exon

position:2679449:1
position: 2679449
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2679621:1
position: 2679621
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:2679805-2679913:1:exon

position:2679805:1
position: 2679805
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2679913:1
position: 2679913
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:2680024-2680483:1:exon

position:2680024:1
position: 2680024
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

SRA1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 87175
gene: SRA1
exception: unclassified translation discrepancy
note: The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: inserted 2 bases in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: LOW QUALITY PROTEIN: steroid receptor RNA activator 1
translation: MAESYVKPGNQERGWNDPPXFSYGLQAQAGGSRRTPLTRRAPPPPAGAPPAPPPRALGPPPQGAVGAAPRAEGRPSAACPEQEECSVSADTVLAPLRAALDACRATVQKQVCNDIGRRLTVLEDAWAQGKLSAPVRKRMNLLVQELQQQHWDAADEIHRSLMVDHVNEVSQWMVGVKRLIAETRDLPTGQMDGSADPEPATEPVTEPVTGPVTELATEPEQEEP
SIO_010081: SRA1
subclass of: SO_0000673
so part of: SRA1
location: join(2678831..2678855,2679097..2679220,2679449..2679621,2679805..2679913,2680024..2680265)
location: region:2678831-2680265:1
so has part: feature:2678831-2678855:1:exon
so has part: feature:2679097-2679220:1:exon
so has part: feature:2679449-2679621:1:exon
so has part: feature:2679805-2679913:1:exon
so has part: feature:2680024-2680265:1:exon

XP_030813627.1
type: Protein
SIO_000068: ncbiprotein

position:2680265:1
position: 2680265
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2678831-2678855:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2679097-2679220:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2679449-2679621:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2679805-2679913:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2680024-2680265:1:exon

LOC115908880
type: Gene
subclass of: SO_0000704
RO_0002162: 87175
gene: LOC115908880
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(2680739..2781177)
location: region:2680739-2781177:-1
so has part: feature:2680739-2781177:-1:exon
subclass of: SO_0000010

115908880
type: Gene
SIO_000068: ncbigene

position:2680739:-1
position: 2680739
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2781177:-1
position: 2781177
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2680739-2781177:-1:exon

LOC115908880
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 87175
gene: LOC115908880
product: ankyrin repeat and KH domain-containing protein 1-like, transcript variant X10
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 18 ESTs, 1 Protein, and 98% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_030957765.1
SIO_010081: LOC115908880
subclass of: SO_0000673
so part of: LOC115908880
location: complement(join(2680739..2681257,2681428..2681601,2685188..2685352,2686277..2686452,2687409..2687660,2688750..2688929,2693782..2695397,2695702..2695851,2697345..2697455,2698860..2699006,2699772..2699846,2700276..2700729,2701045..2701219,2702199..2702315,2703025..2703120,2704205..2704367,2705182..2705357,2706577..2706790,2707586..2707728,2709171..2709316,2710076..2710187,2710316..2710461,2717055..2717798,2726299..2726401,2727085..2727228,2727385..2727512,2728130..2728217,2735413..2735522,2736971..2737162,2737347..2737584,2739978..2740072,2741600..2741833,2742900..2743047,2743907..2744054,2745988..2746144,2766071..2766224,2780812..2781177))
location: region:2680739-2781177:-1
so has part: feature:2780812-2781177:-1:exon
so has part: feature:2766071-2766224:-1:exon
so has part: feature:2745988-2746144:-1:exon
so has part: feature:2743907-2744054:-1:exon
so has part: feature:2742900-2743047:-1:exon
so has part: feature:2741600-2741833:-1:exon
so has part: feature:2739978-2740072:-1:exon
so has part: feature:2737347-2737584:-1:exon
so has part: feature:2736971-2737162:-1:exon
so has part: feature:2735413-2735522:-1:exon
so has part: feature:2728130-2728217:-1:exon
so has part: feature:2727385-2727512:-1:exon
so has part: feature:2727085-2727228:-1:exon
so has part: feature:2726299-2726401:-1:exon
so has part: feature:2717055-2717798:-1:exon
so has part: feature:2710316-2710461:-1:exon
so has part: feature:2710076-2710187:-1:exon
so has part: feature:2709171-2709316:-1:exon
so has part: feature:2707586-2707728:-1:exon
so has part: feature:2706577-2706790:-1:exon
so has part: feature:2705182-2705357:-1:exon
so has part: feature:2704205-2704367:-1:exon
so has part: feature:2703025-2703120:-1:exon
so has part: feature:2702199-2702315:-1:exon
so has part: feature:2701045-2701219:-1:exon
so has part: feature:2700276-2700729:-1:exon
so has part: feature:2699772-2699846:-1:exon
so has part: feature:2698860-2699006:-1:exon
so has part: feature:2697345-2697455:-1:exon
so has part: feature:2695702-2695851:-1:exon
so has part: feature:2693782-2695397:-1:exon
so has part: feature:2688750-2688929:-1:exon
so has part: feature:2687409-2687660:-1:exon
so has part: feature:2686277-2686452:-1:exon
so has part: feature:2685188-2685352:-1:exon
so has part: feature:2681428-2681601:-1:exon
so has part: feature:2680739-2681257:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2780812-2781177:-1:exon

position:2780812:-1
position: 2780812
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2766071-2766224:-1:exon

position:2766071:-1
position: 2766071
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2766224:-1
position: 2766224
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2745988-2746144:-1:exon

position:2745988:-1
position: 2745988
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2746144:-1
position: 2746144
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:2743907-2744054:-1:exon

position:2743907:-1
position: 2743907
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2744054:-1
position: 2744054
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:2742900-2743047:-1:exon

position:2742900:-1
position: 2742900
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2743047:-1
position: 2743047
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:2741600-2741833:-1:exon

position:2741600:-1
position: 2741600
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2741833:-1
position: 2741833
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:2739978-2740072:-1:exon

position:2739978:-1
position: 2739978
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2740072:-1
position: 2740072
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:2737347-2737584:-1:exon

position:2737347:-1
position: 2737347
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2737584:-1
position: 2737584
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:2736971-2737162:-1:exon

position:2736971:-1
position: 2736971
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2737162:-1
position: 2737162
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:2735413-2735522:-1:exon

position:2735413:-1
position: 2735413
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2735522:-1
position: 2735522
reference: sequence
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urn:…
SIO_000300: 11
SIO_000628: feature:2728130-2728217:-1:exon

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urn:…
SIO_000300: 12
SIO_000628: feature:2727385-2727512:-1:exon

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urn:…
SIO_000300: 13
SIO_000628: feature:2727085-2727228:-1:exon

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urn:…
SIO_000300: 14
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urn:…
SIO_000300: 15
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urn:…
SIO_000300: 16
SIO_000628: feature:2710316-2710461:-1:exon

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urn:…
SIO_000300: 17
SIO_000628: feature:2710076-2710187:-1:exon

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urn:…
SIO_000300: 18
SIO_000628: feature:2709171-2709316:-1:exon

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urn:…
SIO_000300: 19
SIO_000628: feature:2707586-2707728:-1:exon

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urn:…
SIO_000300: 20
SIO_000628: feature:2706577-2706790:-1:exon

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urn:…
SIO_000300: 21
SIO_000628: feature:2705182-2705357:-1:exon

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urn:…
SIO_000300: 22
SIO_000628: feature:2704205-2704367:-1:exon

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urn:…
SIO_000300: 23
SIO_000628: feature:2703025-2703120:-1:exon

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SIO_000300: 24
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urn:…
SIO_000300: 25
SIO_000628: feature:2701045-2701219:-1:exon

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SIO_000300: 29
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SIO_000300: 35
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SIO_000300: 36
SIO_000628: feature:2681428-2681601:-1:exon

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SIO_000300: 37
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LOC115908880
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 87175
gene: LOC115908880
product: ankyrin repeat and KH domain-containing protein 1-like, transcript variant X9
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 18 ESTs, 1 Protein, and 98% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_030957764.1
SIO_010081: LOC115908880
subclass of: SO_0000673
so part of: LOC115908880
location: complement(join(2680739..2681257,2681428..2681601,2685188..2685352,2686277..2686452,2687409..2687663,2688735..2688929,2693782..2695397,2695702..2695851,2697345..2697455,2698860..2699006,2699772..2699846,2700276..2700729,2701045..2701219,2702199..2702315,2703025..2703120,2704205..2704367,2705182..2705357,2706577..2706790,2707586..2707728,2709171..2709316,2710076..2710187,2710316..2710461,2717055..2717798,2726299..2726401,2727085..2727228,2727385..2727512,2728130..2728217,2735413..2735522,2736971..2737162,2737347..2737584,2739978..2740072,2741600..2741833,2742900..2743047,2743907..2744054,2745988..2746144,2766071..2766224,2780812..2781177))
location: region:2680739-2781177:-1
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urn:…
SIO_000300: 1
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urn:…
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SIO_000300: 14
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urn:…
SIO_000300: 15
SIO_000628: feature:2717055-2717798:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:2710316-2710461:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:2710076-2710187:-1:exon

urn:…
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urn:…
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urn:…
SIO_000300: 20
SIO_000628: feature:2706577-2706790:-1:exon

urn:…
SIO_000300: 21
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urn:…
SIO_000300: 22
SIO_000628: feature:2704205-2704367:-1:exon

urn:…
SIO_000300: 23
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urn:…
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urn:…
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SIO_000628: feature:2695702-2695851:-1:exon

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SIO_000628: feature:2693782-2695397:-1:exon

urn:…
SIO_000300: 32
SIO_000628: feature:2688735-2688929:-1:exon

position:2688735:-1
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urn:…
SIO_000300: 33
SIO_000628: feature:2687409-2687663:-1:exon

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reference: sequence
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urn:…
SIO_000300: 34
SIO_000628: feature:2686277-2686452:-1:exon

urn:…
SIO_000300: 35
SIO_000628: feature:2685188-2685352:-1:exon

urn:…
SIO_000300: 36
SIO_000628: feature:2681428-2681601:-1:exon

urn:…
SIO_000300: 37
SIO_000628: feature:2680739-2681257:-1:exon

LOC115908880
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 87175
gene: LOC115908880
product: ankyrin repeat and KH domain-containing protein 1-like, transcript variant X5
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 23 ESTs, 1 Protein, and 98% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_030957760.1
SIO_010081: LOC115908880
subclass of: SO_0000673
so part of: LOC115908880
location: complement(join(2680739..2681257,2681428..2681601,2684689..2684735,2685188..2685352,2686277..2686452,2687409..2687663,2688735..2688881,2693782..2695397,2695702..2695851,2697345..2697455,2698860..2699006,2699772..2699846,2700276..2700729,2701045..2701219,2702199..2702315,2703025..2703120,2704205..2704367,2705182..2705357,2706577..2706790,2707586..2707728,2709171..2709316,2710076..2710187,2710316..2710461,2717055..2717798,2726299..2726401,2727085..2727228,2727385..2727512,2728130..2728217,2735413..2735522,2736971..2737162,2737347..2737584,2739978..2740072,2741600..2741833,2742900..2743047,2743907..2744054,2745988..2746144,2766071..2766224,2780812..2781090))
location: region:2680739-2781090:-1
so has part: feature:2780812-2781090:-1:exon
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position:2781090:-1
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reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
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urn:…
SIO_000300: 33
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type: ReverseStrandPosition
type: ExactPosition

urn:…
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urn:…
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LOC115908880
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 87175
gene: LOC115908880
product: ankyrin repeat and KH domain-containing protein 1-like, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 23 ESTs, 1 Protein, and 99% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_030957755.1
SIO_010081: LOC115908880
subclass of: SO_0000673
so part of: LOC115908880
location: complement(join(2680740..2681257,2681428..2681601,2684689..2684735,2685188..2685352,2686277..2686452,2687409..2687663,2688735..2688929,2693782..2695397,2695702..2695851,2697345..2697455,2698860..2699006,2699772..2699846,2700276..2700729,2701045..2701219,2702199..2702315,2703025..2703120,2704205..2704367,2705182..2705357,2706577..2706790,2707586..2707728,2709171..2709316,2710076..2710187,2710316..2710461,2717055..2717798,2726299..2726401,2727085..2727228,2727385..2727512,2728130..2728217,2735413..2735522,2736971..2737162,2737347..2737584,2739978..2740072,2741600..2741833,2742900..2743047,2743907..2744054,2745988..2746144,2766071..2766224,2780812..2781177))
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position:2680740:-1
position: 2680740
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type: ReverseStrandPosition
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LOC115908880
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 87175
gene: LOC115908880
product: ankyrin repeat and KH domain-containing protein 1-like, transcript variant X7
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 23 ESTs, 1 Protein, and 98% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XM_030957762.1
SIO_010081: LOC115908880
subclass of: SO_0000673
so part of: LOC115908880
location: complement(join(2680740..2681257,2681428..2681601,2684689..2684735,2685188..2685352,2686277..2686452,2687409..2687660,2693782..2695397,2695702..2695851,2697345..2697455,2698860..2699006,2699772..2699846,2700276..2700729,2701045..2701219,2702199..2702315,2703025..2703120,2704205..2704367,2705182..2705357,2706577..2706790,2707586..2707728,2709171..2709316,2710076..2710187,2710316..2710461,2717055..2717798,2726299..2726401,2727085..2727228,2727385..2727512,2728130..2728217,2735413..2735522,2736971..2737162,2737347..2737584,2739978..2740072,2741600..2741833,2742900..2743047,2743907..2744054,2745988..2746144,2766071..2766224,2780812..2781090))
location: region:2680740-2781090:-1
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LOC115908880
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 87175
gene: LOC115908880
product: ankyrin repeat and KH domain-containing protein 1-like, transcript variant X6
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 23 ESTs, 1 Protein, and 98% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XM_030957761.1
SIO_010081: LOC115908880
subclass of: SO_0000673
so part of: LOC115908880
location: complement(join(2680740..2681257,2681428..2681601,2684689..2684735,2685188..2685352,2686277..2686452,2687409..2687663,2693782..2695397,2695702..2695851,2697345..2697455,2698860..2699006,2699772..2699846,2700276..2700729,2701045..2701219,2702199..2702315,2703025..2703120,2704205..2704367,2705182..2705357,2706577..2706790,2707586..2707728,2709171..2709316,2710076..2710187,2710316..2710461,2717055..2717798,2726299..2726401,2727085..2727228,2727385..2727512,2728130..2728217,2735413..2735522,2736971..2737162,2737347..2737584,2739978..2740072,2741600..2741833,2742900..2743047,2743907..2744054,2745988..2746144,2766071..2766224,2780812..2781090))
location: region:2680740-2781090:-1
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urn:…
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LOC115908880
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 87175
gene: LOC115908880
product: ankyrin repeat and KH domain-containing protein 1-like, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 23 ESTs, 2 Proteins, and 98% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XM_030957758.1
SIO_010081: LOC115908880
subclass of: SO_0000673
so part of: LOC115908880
location: complement(join(2680740..2681257,2681428..2681601,2684689..2684735,2685188..2685352,2686277..2686452,2687409..2687639,2688750..2688929,2693782..2695397,2695702..2695851,2697345..2697455,2698860..2699006,2699772..2699846,2700276..2700729,2701045..2701219,2702199..2702315,2703025..2703120,2704205..2704367,2705182..2705357,2706577..2706790,2707586..2707728,2709171..2709316,2710076..2710187,2710316..2710461,2717055..2717798,2726299..2726401,2727085..2727228,2727385..2727512,2728130..2728217,2735413..2735522,2736971..2737162,2737347..2737584,2739978..2740072,2741600..2741833,2742900..2743047,2743907..2744054,2745988..2746144,2766071..2766224,2780812..2781090))
location: region:2680740-2781090:-1
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position:2687639:-1
position: 2687639
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
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LOC115908880
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 87175
gene: LOC115908880
product: ankyrin repeat and KH domain-containing protein 1-like, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 24 ESTs, 1 Protein, and 98% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XM_030957757.1
SIO_010081: LOC115908880
subclass of: SO_0000673
so part of: LOC115908880
location: complement(join(2680740..2681257,2681428..2681601,2684689..2684735,2685188..2685352,2686277..2686452,2687409..2687660,2688750..2688929,2693782..2695397,2695702..2695851,2697345..2697455,2698860..2699006,2699772..2699846,2700276..2700729,2701045..2701219,2702199..2702315,2703025..2703120,2704205..2704367,2705182..2705357,2706577..2706790,2707586..2707728,2709171..2709316,2710076..2710187,2710316..2710461,2717055..2717798,2726299..2726401,2727085..2727228,2727385..2727512,2728130..2728217,2735413..2735522,2736971..2737162,2737347..2737584,2739978..2740072,2741600..2741833,2742900..2743047,2743907..2744054,2745988..2746144,2766071..2766224,2780812..2781090))
location: region:2680740-2781090:-1
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urn:…
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LOC115908880
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 87175
gene: LOC115908880
product: ankyrin repeat and KH domain-containing protein 1-like, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 26 ESTs, 2 Proteins, and 98% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XM_030957756.1
SIO_010081: LOC115908880
subclass of: SO_0000673
so part of: LOC115908880
location: complement(join(2680740..2681257,2681428..2681601,2684689..2684735,2685188..2685352,2686277..2686452,2687409..2687663,2688750..2688929,2693782..2695397,2695702..2695851,2697345..2697455,2698860..2699006,2699772..2699846,2700276..2700729,2701045..2701219,2702199..2702315,2703025..2703120,2704205..2704367,2705182..2705357,2706577..2706790,2707586..2707728,2709171..2709316,2710076..2710187,2710316..2710461,2717055..2717798,2726299..2726401,2727085..2727228,2727385..2727512,2728130..2728217,2735413..2735522,2736971..2737162,2737347..2737584,2739978..2740072,2741600..2741833,2742900..2743047,2743907..2744054,2745988..2746144,2766071..2766224,2780812..2781090))
location: region:2680740-2781090:-1
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urn:…
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SIO_000628: feature:2680740-2681257:-1:exon

LOC115908880
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 87175
gene: LOC115908880
product: ankyrin repeat and KH domain-containing protein 1-like, transcript variant X8
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 18 ESTs, 3 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_030957763.1
SIO_010081: LOC115908880
subclass of: SO_0000673
so part of: LOC115908880
location: complement(join(2680742..2681257,2681428..2681601,2684689..2684735,2685188..2685352,2686277..2686452,2687409..2687663,2688735..2688929,2693782..2695397,2695702..2695851,2697345..2697455,2698860..2699006,2699772..2699846,2700276..2700729,2701045..2701219,2702199..2702315,2703025..2703120,2704205..2704367,2705182..2705357,2706577..2706790,2707586..2707728,2709171..2709316,2710076..2710187,2710316..2710461,2726299..2726401,2727085..2727228,2727385..2727512,2728130..2728217,2735413..2735522,2736971..2737162,2737347..2737584,2739978..2740072,2741600..2741833,2742900..2743047,2743907..2744054,2745988..2746144,2766071..2766224,2780812..2781177))
location: region:2680742-2781177:-1
so has part: feature:2780812-2781177:-1:exon
so has part: feature:2766071-2766224:-1:exon
so has part: feature:2745988-2746144:-1:exon
so has part: feature:2743907-2744054:-1:exon
so has part: feature:2742900-2743047:-1:exon
so has part: feature:2741600-2741833:-1:exon
so has part: feature:2739978-2740072:-1:exon
so has part: feature:2737347-2737584:-1:exon
so has part: feature:2736971-2737162:-1:exon
so has part: feature:2735413-2735522:-1:exon
so has part: feature:2728130-2728217:-1:exon
so has part: feature:2727385-2727512:-1:exon
so has part: feature:2727085-2727228:-1:exon
so has part: feature:2726299-2726401:-1:exon
so has part: feature:2710316-2710461:-1:exon
so has part: feature:2710076-2710187:-1:exon
so has part: feature:2709171-2709316:-1:exon
so has part: feature:2707586-2707728:-1:exon
so has part: feature:2706577-2706790:-1:exon
so has part: feature:2705182-2705357:-1:exon
so has part: feature:2704205-2704367:-1:exon
so has part: feature:2703025-2703120:-1:exon
so has part: feature:2702199-2702315:-1:exon
so has part: feature:2701045-2701219:-1:exon
so has part: feature:2700276-2700729:-1:exon
so has part: feature:2699772-2699846:-1:exon
so has part: feature:2698860-2699006:-1:exon
so has part: feature:2697345-2697455:-1:exon
so has part: feature:2695702-2695851:-1:exon
so has part: feature:2693782-2695397:-1:exon
so has part: feature:2688735-2688929:-1:exon
so has part: feature:2687409-2687663:-1:exon
so has part: feature:2686277-2686452:-1:exon
so has part: feature:2685188-2685352:-1:exon
so has part: feature:2684689-2684735:-1:exon
so has part: feature:2681428-2681601:-1:exon
so has part: feature:2680742-2681257:-1:exon

position:2680742:-1
position: 2680742
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2780812-2781177:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2766071-2766224:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2745988-2746144:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2743907-2744054:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2742900-2743047:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2741600-2741833:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2739978-2740072:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2737347-2737584:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2736971-2737162:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2735413-2735522:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:2728130-2728217:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:2727385-2727512:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:2727085-2727228:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:2726299-2726401:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:2710316-2710461:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:2710076-2710187:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:2709171-2709316:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:2707586-2707728:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:2706577-2706790:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:2705182-2705357:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:2704205-2704367:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:2703025-2703120:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:2702199-2702315:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:2701045-2701219:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:2700276-2700729:-1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:2699772-2699846:-1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:2698860-2699006:-1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:2697345-2697455:-1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:2695702-2695851:-1:exon

urn:…
SIO_000300: 30
SIO_000628: feature:2693782-2695397:-1:exon

urn:…
SIO_000300: 31
SIO_000628: feature:2688735-2688929:-1:exon

urn:…
SIO_000300: 32
SIO_000628: feature:2687409-2687663:-1:exon

urn:…
SIO_000300: 33
SIO_000628: feature:2686277-2686452:-1:exon

urn:…
SIO_000300: 34
SIO_000628: feature:2685188-2685352:-1:exon

urn:…
SIO_000300: 35
SIO_000628: feature:2684689-2684735:-1:exon

urn:…
SIO_000300: 36
SIO_000628: feature:2681428-2681601:-1:exon

urn:…
SIO_000300: 37
SIO_000628: feature:2680742-2681257:-1:exon

LOC115908880
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 87175
gene: LOC115908880
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: ankyrin repeat and KH domain-containing protein 1-like isoform X10
translation: MLTDGTAAAAADEEIDSVAPRAPPAAAEPPAAAGPSPLGLRAVRLFGEAGPGGPGGPGAPAAGEAALDFKLAAAVLRSGGGGGSGSDEDEVSEVESFILDQEDLDNPVLKTTSELFLSSAAEGADLRTVDPETQARLEALLEAAGIGKLSTADGKAFADPEVLRRLTSSVSCALDEAAAALTRMRAENNHNNGQVDNRSLAEACSDGDVNAVRKLLDEGRSVNEHTEEGESLLCLACSAGYYELAQVLLAMHANVEDRGNKGDITPLMAAASGGYVDIVKLLLVHCADVNAQSSTGNTALTYACAGGFVDVVKVLLKAGANIEDHNENGHTPLMEAASAGHVEVARVLLEYGAGINTHSNEFKESALTLACYKGHLDMVRFLLEAGADQEHKTDEMHTALMEACMDGHVEVARLLLDSGAQVNMPADSFESPLTLAACGGHVELAALLIERGANLEEVNDEGYTPLMEAAREGHEEMVALLLAQGANINAQTEETQETALTLACCGGFSEVADFLIKAGADIELGCSTPLMEAAQEGHLELVKYLLAAGANVHATTATGDTALTYACENGHTDVADVLLQAGADLEHESEGGRTPLMKAARAGHLCTVQFLISKGANVNRATANNDHTVVSLACAGGHLAVVELLLAHGADPTHRLKDGSTMLIEAAKGGHTNVVSYLLDYPNNVLSVPAADLSQLTPPSQDQSQVPRVPVHTLAMVVPPQEPDRTPQENSPPLLGVVKGASKQKSSSLQVADKDLLPPFHPYQPLECIVEETEGKLNELGQRISAIEKAQLKSLELIQGEPLNKDKIEELKKNREEQVQKKKKILKELQKVERQLQMKTQQQFTKEYLETKGQTDTPPALQQQCSLTGVFPEVEADKGLPEDNFSGLPQVDTILSKDDEQHQSPSPAEQIEFVPIQPLPAPQCNFSGNLGYNGTESLELQKALGNQQNVGQQQQIAGQGLLVQEPDGLMVATPAQTLTDTLDDLIAAVNSRVPSGSTSSSHTTESPTPEPCPQAGSNVPPQSVLPMYPSVDIDAHTESNHDTALTLACAGGHEELVSVLIARGANIEHRDKKGFTPLILAATAGHVGVVEILLDKGGDIEAQSERTKDTPLSLACSGGRQEVVDLLLARGANKEHRNVSDYTPLSLAASGGYVNIIKILLNAGAEINSRTGSKLGISPLMLAAMNGHVPAVKLLLDMGSDINAQIETNRNTALTLACFQGRAEVVSLLLDRKANVEHRAKTGLTPLMEAASGGYAEVGRVLLDKGADVNAPPVPSSRDTALTIAADKGHYKFCELLINRGAHIDVRNKKGNTPLWLAANGGHYDVVQLLVQAGADVDAADNRKITPLMSAFRKGHVKVVQFLVKEVNQFPSDIECMRYIATITDKDLLKKCHQCVETIVKAKDQQAAEANKNATILLKELDLEKSREESRKQALAAKREKRKEKRKKKKEEQKRKQEEDEENKPKETLELQEDDDEEENDDEVEQEVPIEPPSATTTTTIGISATSTTFTNAFGKKRANVVTTPSTNRKNKKNKTKETPQNMQIILPDQHISLAQQKADKNKINGEPRGGGASGNSDSDNLDSTDCNSESSSGGKSQELNFTMDTNSSERRYASLLIPSQEDKNSTSASKTPTRREEDDSEHFTCQVDGQFDITLSSQRLDGEGHSNSLSTTYKSVSLPLSSPNVKLNLTSPKRGQKREEGWKEVVRRQVGRVLKDPPPSNALQPTPIEQFQLQRGGRCCSGAKRSKKLSVPASVVSRIMGRGGCNITAIQDVTGAHIDVDKQKDKNGERMITIRGGTESTRYAVQLINALIQDPAKELEDLIPKTHIRTPASSSKSIHANFSSGVSTATASNKNSFPLGAPPLVTSQSSTLSTFQPPNKLNKNVPANVRSSFPVSLPLAYSHPHFALLAAQTMQQIRHPRLPMAQFGGTFSPSPNTWGPFPVRPVNPGSTNSSPKHNSSSRVGSQNGNVLQTESPGLATSTCPVTASSAAASTQPLCV…
SIO_010081: LOC115908880
subclass of: SO_0000673
so part of: LOC115908880
location: complement(join(2681114..2681257,2681428..2681601,2685188..2685352,2686277..2686452,2687409..2687660,2688750..2688929,2693782..2695397,2695702..2695851,2697345..2697455,2698860..2699006,2699772..2699846,2700276..2700729,2701045..2701219,2702199..2702315,2703025..2703120,2704205..2704367,2705182..2705357,2706577..2706790,2707586..2707728,2709171..2709316,2710076..2710187,2710316..2710461,2717055..2717798,2726299..2726401,2727085..2727228,2727385..2727512,2728130..2728217,2735413..2735522,2736971..2737162,2737347..2737584,2739978..2740072,2741600..2741833,2742900..2743047,2743907..2744054,2745988..2746144,2766071..2766224,2780812..2781090))
location: region:2681114-2781090:-1
so has part: feature:2780812-2781090:-1:exon
so has part: feature:2766071-2766224:-1:exon
so has part: feature:2745988-2746144:-1:exon
so has part: feature:2743907-2744054:-1:exon
so has part: feature:2742900-2743047:-1:exon
so has part: feature:2741600-2741833:-1:exon
so has part: feature:2739978-2740072:-1:exon
so has part: feature:2737347-2737584:-1:exon
so has part: feature:2736971-2737162:-1:exon
so has part: feature:2735413-2735522:-1:exon
so has part: feature:2728130-2728217:-1:exon
so has part: feature:2727385-2727512:-1:exon
so has part: feature:2727085-2727228:-1:exon
so has part: feature:2726299-2726401:-1:exon
so has part: feature:2717055-2717798:-1:exon
so has part: feature:2710316-2710461:-1:exon
so has part: feature:2710076-2710187:-1:exon
so has part: feature:2709171-2709316:-1:exon
so has part: feature:2707586-2707728:-1:exon
so has part: feature:2706577-2706790:-1:exon
so has part: feature:2705182-2705357:-1:exon
so has part: feature:2704205-2704367:-1:exon
so has part: feature:2703025-2703120:-1:exon
so has part: feature:2702199-2702315:-1:exon
so has part: feature:2701045-2701219:-1:exon
so has part: feature:2700276-2700729:-1:exon
so has part: feature:2699772-2699846:-1:exon
so has part: feature:2698860-2699006:-1:exon
so has part: feature:2697345-2697455:-1:exon
so has part: feature:2695702-2695851:-1:exon
so has part: feature:2693782-2695397:-1:exon
so has part: feature:2688750-2688929:-1:exon
so has part: feature:2687409-2687660:-1:exon
so has part: feature:2686277-2686452:-1:exon
so has part: feature:2685188-2685352:-1:exon
so has part: feature:2681428-2681601:-1:exon
so has part: feature:2681114-2681257:-1:exon

XP_030813625.1
type: Protein
SIO_000068: ncbiprotein

position:2681114:-1
position: 2681114
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2780812-2781090:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2766071-2766224:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2745988-2746144:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2743907-2744054:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2742900-2743047:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2741600-2741833:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2739978-2740072:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2737347-2737584:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2736971-2737162:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2735413-2735522:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:2728130-2728217:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:2727385-2727512:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:2727085-2727228:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:2726299-2726401:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:2717055-2717798:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:2710316-2710461:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:2710076-2710187:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:2709171-2709316:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:2707586-2707728:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:2706577-2706790:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:2705182-2705357:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:2704205-2704367:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:2703025-2703120:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:2702199-2702315:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:2701045-2701219:-1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:2700276-2700729:-1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:2699772-2699846:-1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:2698860-2699006:-1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:2697345-2697455:-1:exon

urn:…
SIO_000300: 30
SIO_000628: feature:2695702-2695851:-1:exon

urn:…
SIO_000300: 31
SIO_000628: feature:2693782-2695397:-1:exon

urn:…
SIO_000300: 32
SIO_000628: feature:2688750-2688929:-1:exon

urn:…
SIO_000300: 33
SIO_000628: feature:2687409-2687660:-1:exon

urn:…
SIO_000300: 34
SIO_000628: feature:2686277-2686452:-1:exon

urn:…
SIO_000300: 35
SIO_000628: feature:2685188-2685352:-1:exon

urn:…
SIO_000300: 36
SIO_000628: feature:2681428-2681601:-1:exon

urn:…
SIO_000300: 37
SIO_000628: feature:2681114-2681257:-1:exon

LOC115908880
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 87175
gene: LOC115908880
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: ankyrin repeat and KH domain-containing protein 1-like isoform X9
translation: MLTDGTAAAAADEEIDSVAPRAPPAAAEPPAAAGPSPLGLRAVRLFGEAGPGGPGGPGAPAAGEAALDFKLAAAVLRSGGGGGSGSDEDEVSEVESFILDQEDLDNPVLKTTSELFLSSAAEGADLRTVDPETQARLEALLEAAGIGKLSTADGKAFADPEVLRRLTSSVSCALDEAAAALTRMRAENNHNNGQVDNRSLAEACSDGDVNAVRKLLDEGRSVNEHTEEGESLLCLACSAGYYELAQVLLAMHANVEDRGNKGDITPLMAAASGGYVDIVKLLLVHCADVNAQSSTGNTALTYACAGGFVDVVKVLLKAGANIEDHNENGHTPLMEAASAGHVEVARVLLEYGAGINTHSNEFKESALTLACYKGHLDMVRFLLEAGADQEHKTDEMHTALMEACMDGHVEVARLLLDSGAQVNMPADSFESPLTLAACGGHVELAALLIERGANLEEVNDEGYTPLMEAAREGHEEMVALLLAQGANINAQTEETQETALTLACCGGFSEVADFLIKAGADIELGCSTPLMEAAQEGHLELVKYLLAAGANVHATTATGDTALTYACENGHTDVADVLLQAGADLEHESEGGRTPLMKAARAGHLCTVQFLISKGANVNRATANNDHTVVSLACAGGHLAVVELLLAHGADPTHRLKDGSTMLIEAAKGGHTNVVSYLLDYPNNVLSVPAADLSQLTPPSQDQSQVPRVPVHTLAMVVPPQEPDRTPQENSPPLLGVVKGASKQKSSSLQVADKDLLPPFHPYQPLECIVEETEGKLNELGQRISAIEKAQLKSLELIQGEPLNKDKIEELKKNREEQVQKKKKILKELQKVERQLQMKTQQQFTKEYLETKGQTDTPPALQQQCSLTGVFPEVEADKGLPEDNFSGLPQVDTILSKDDEQHQSPSPAEQIEFVPIQPLPAPQCNFSGNLGYNGTESLELQKALGNQQNVGQQQQIAGQGLLVQEPDGLMVATPAQTLTDTLDDLIAAVNSRVPSGSTSSSHTTESPTPEPCPQAGSNVPPQSVLPMYPSVDIDAHTESNHDTALTLACAGGHEELVSVLIARGANIEHRDKKGFTPLILAATAGHVGVVEILLDKGGDIEAQSERTKDTPLSLACSGGRQEVVDLLLARGANKEHRNVSDYTPLSLAASGGYVNIIKILLNAGAEINSRTGSKLGISPLMLAAMNGHVPAVKLLLDMGSDINAQIETNRNTALTLACFQGRAEVVSLLLDRKANVEHRAKTGLTPLMEAASGGYAEVGRVLLDKGADVNAPPVPSSRDTALTIAADKGHYKFCELLINRGAHIDVRNKKGNTPLWLAANGGHYDVVQLLVQAGADVDAADNRKITPLMSAFRKGHVKVVQFLVKEVNQFPSDIECMRYIATITDKDLLKKCHQCVETIVKAKDQQAAEANKNATILLKELDLEKSREESRKQALAAKREKRKEKRKKKKEEQKRKQEEDEENKPKETLELQEDDDEEENDDEVEQEVPIEPPSATTTTTIGISATSTTFTNAFGKKRANVVTTPSTNRKNKKNKTKETPQNMQIILPDQHISLAQQKADKNKINGEPRGGGASGNSDSDNLDSTDCNSESSSGGKSQELNFTMDTNSSERRYASLLIPSQEDKNSTSASKTPTRREEDDSEHFTCQVDGQFDITLSSQRLDGEGHSNSLSTTYKSVSLPLSSPNVKLNLTSPKRGQKREEGWKEVVRRQVGRVLKDPPPSNALQPTPIEQFQLQRGGRCCSGAKRSKKLSVPASVVSRIMGRGGCNITAIQDVTGAHIDVDKQKDKNGERMITIRGGTESTRYAVQLINALIQDPAKELEDLIPKTHIRTPASSSKSIHANFSSGVSTATASNKNSFPLGAPPLVTSQSSTLSTFQPPNKLNKNVPANVRSSFPVSLPLAYSHPHFALLAAQTMQQIRHPRLPMAQFGGTFSPSPNTWGPFPVRPVNPGSTNSSPKHNSSSRVGSQNGNVLQTESPGLATSTCPVTASSAAASTQPLCV…
SIO_010081: LOC115908880
subclass of: SO_0000673
so part of: LOC115908880
location: complement(join(2681114..2681257,2681428..2681601,2685188..2685352,2686277..2686452,2687409..2687663,2688735..2688929,2693782..2695397,2695702..2695851,2697345..2697455,2698860..2699006,2699772..2699846,2700276..2700729,2701045..2701219,2702199..2702315,2703025..2703120,2704205..2704367,2705182..2705357,2706577..2706790,2707586..2707728,2709171..2709316,2710076..2710187,2710316..2710461,2717055..2717798,2726299..2726401,2727085..2727228,2727385..2727512,2728130..2728217,2735413..2735522,2736971..2737162,2737347..2737584,2739978..2740072,2741600..2741833,2742900..2743047,2743907..2744054,2745988..2746144,2766071..2766224,2780812..2781090))
location: region:2681114-2781090:-1
so has part: feature:2780812-2781090:-1:exon
so has part: feature:2766071-2766224:-1:exon
so has part: feature:2745988-2746144:-1:exon
so has part: feature:2743907-2744054:-1:exon
so has part: feature:2742900-2743047:-1:exon
so has part: feature:2741600-2741833:-1:exon
so has part: feature:2739978-2740072:-1:exon
so has part: feature:2737347-2737584:-1:exon
so has part: feature:2736971-2737162:-1:exon
so has part: feature:2735413-2735522:-1:exon
so has part: feature:2728130-2728217:-1:exon
so has part: feature:2727385-2727512:-1:exon
so has part: feature:2727085-2727228:-1:exon
so has part: feature:2726299-2726401:-1:exon
so has part: feature:2717055-2717798:-1:exon
so has part: feature:2710316-2710461:-1:exon
so has part: feature:2710076-2710187:-1:exon
so has part: feature:2709171-2709316:-1:exon
so has part: feature:2707586-2707728:-1:exon
so has part: feature:2706577-2706790:-1:exon
so has part: feature:2705182-2705357:-1:exon
so has part: feature:2704205-2704367:-1:exon
so has part: feature:2703025-2703120:-1:exon
so has part: feature:2702199-2702315:-1:exon
so has part: feature:2701045-2701219:-1:exon
so has part: feature:2700276-2700729:-1:exon
so has part: feature:2699772-2699846:-1:exon
so has part: feature:2698860-2699006:-1:exon
so has part: feature:2697345-2697455:-1:exon
so has part: feature:2695702-2695851:-1:exon
so has part: feature:2693782-2695397:-1:exon
so has part: feature:2688735-2688929:-1:exon
so has part: feature:2687409-2687663:-1:exon
so has part: feature:2686277-2686452:-1:exon
so has part: feature:2685188-2685352:-1:exon
so has part: feature:2681428-2681601:-1:exon
so has part: feature:2681114-2681257:-1:exon

XP_030813624.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:2780812-2781090:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2766071-2766224:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2745988-2746144:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2743907-2744054:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2742900-2743047:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2741600-2741833:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2739978-2740072:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2737347-2737584:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2736971-2737162:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2735413-2735522:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:2728130-2728217:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:2727385-2727512:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:2727085-2727228:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:2726299-2726401:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:2717055-2717798:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:2710316-2710461:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:2710076-2710187:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:2709171-2709316:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:2707586-2707728:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:2706577-2706790:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:2705182-2705357:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:2704205-2704367:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:2703025-2703120:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:2702199-2702315:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:2701045-2701219:-1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:2700276-2700729:-1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:2699772-2699846:-1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:2698860-2699006:-1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:2697345-2697455:-1:exon

urn:…
SIO_000300: 30
SIO_000628: feature:2695702-2695851:-1:exon

urn:…
SIO_000300: 31
SIO_000628: feature:2693782-2695397:-1:exon

urn:…
SIO_000300: 32
SIO_000628: feature:2688735-2688929:-1:exon

urn:…
SIO_000300: 33
SIO_000628: feature:2687409-2687663:-1:exon

urn:…
SIO_000300: 34
SIO_000628: feature:2686277-2686452:-1:exon

urn:…
SIO_000300: 35
SIO_000628: feature:2685188-2685352:-1:exon

urn:…
SIO_000300: 36
SIO_000628: feature:2681428-2681601:-1:exon

urn:…
SIO_000300: 37
SIO_000628: feature:2681114-2681257:-1:exon

LOC115908880
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 87175
gene: LOC115908880
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: ankyrin repeat and KH domain-containing protein 1-like isoform X8
translation: MLTDGTAAAAADEEIDSVAPRAPPAAAEPPAAAGPSPLGLRAVRLFGEAGPGGPGGPGAPAAGEAALDFKLAAAVLRSGGGGGSGSDEDEVSEVESFILDQEDLDNPVLKTTSELFLSSAAEGADLRTVDPETQARLEALLEAAGIGKLSTADGKAFADPEVLRRLTSSVSCALDEAAAALTRMRAENNHNNGQVDNRSLAEACSDGDVNAVRKLLDEGRSVNEHTEEGESLLCLACSAGYYELAQVLLAMHANVEDRGNKGDITPLMAAASGGYVDIVKLLLVHCADVNAQSSTGNTALTYACAGGFVDVVKVLLKAGANIEDHNENGHTPLMEAASAGHVEVARVLLEYGAGINTHSNEFKESALTLACYKGHLDMVRFLLEAGADQEHKTDEMHTALMEACMDGHVEVARLLLDSGAQVNMPADSFESPLTLAACGGHVELAALLIERGANLEEVNDEGYTPLMEAAREGHEEMVALLLAQGANINAQTEETQETALTLACCGGFSEVADFLIKAGADIELGCSTPLMEAAQEGHLELVKYLLAAGANVHATTATGDTALTYACENGHTDVADVLLQAGADLEHESEGGRTPLMKAARAGHLCTVQFLISKGANVNRATANNDHTVVSLACAGGHLAVVELLLAHGADPTHRLKDGSTMLIEAAKGGHTNVVSYLLDYPNNVLSVPAADLSQLTPPSQDQSQVPRVPVHTLAMVVPPQEPDRTPQENSPPLLGVVKAVNSRVPSGSTSSSHTTESPTPEPCPQAGSNVPPQSVLPMYPSVDIDAHTESNHDTALTLACAGGHEELVSVLIARGANIEHRDKKGFTPLILAATAGHVGVVEILLDKGGDIEAQSERTKDTPLSLACSGGRQEVVDLLLARGANKEHRNVSDYTPLSLAASGGYVNIIKILLNAGAEINSRTGSKLGISPLMLAAMNGHVPAVKLLLDMGSDINAQIETNRNTALTLACFQGRAEVVSLLLDRKANVEHRAKTGLTPLMEAASGGYAEVGRVLLDKGADVNAPPVPSSRDTALTIAADKGHYKFCELLINRGAHIDVRNKKGNTPLWLAANGGHYDVVQLLVQAGADVDAADNRKITPLMSAFRKGHVKVVQFLVKEVNQFPSDIECMRYIATITDKDLLKKCHQCVETIVKAKDQQAAEANKNATILLKELDLEKSREESRKQALAAKREKRKEKRKKKKEEQKRKQEEDEENKPKETLELQEDDDEEENDDEVEQEVPIEPPSATTTTTIGISATSTTFTNAFGKKRANVVTTPSTNRKNKKNKTKETPQNMQIILPDQHISLAQQKADKNKINGEPRGGGASGNSDSDNLDSTDCNSESSSGGKSQELNFTMDTNSSERRYASLLIPSQEDKNSTSASKTPTRREEDDSEHFTCQVDGQFDITLSSQRLDGEGHSNSLSTTYKSVSLPLSSPNVKLNLTSPKRGQKREEGWKEVVRRQVGRVLKDPPPSNALQPTPIEQFQLQRGGRCCSGAKRSKKLSVPASVVSRIMGRGGCNITAIQDVTGAHIDVDKQKDKNGERMITIRGGTESTRYAVQLINALIQDPAKELEDLIPKTHIRTPASSSKSIHANFSSGVSTATASNKNSFPLGAPPLVTSQSSTLSTFQPPNKLNKNVPANVRSSFPVSLPLAYSHPHFALLAAQTMQQIRHPRLPMAQFGGTFSPSPNTWGPFPVRPVNPGSTNSSPKHNSSSRVGSQNGNVLQTESPGLATSTCPVTASSAAASTQPLCVTSNRTPSSVRKQLFACVPKTSAAATAISTVTSTCSTLPSASSAPANNGQVPTAFLPSTAPQAQHSALKADSFSAVSAPKEKVPTPEQPPTSACPPASVTSSCSVSASSSSAGTETRPAGSPAPPSSAQDEALPTSMAELSPSMSMPFSSSSETAPLSLASPRSVVADNQDNSNLPQVAVPAPRVTHRMQSRGSFYSVVPNANLHQDPQSIFVTNQVPLTPSQGPPAAVQLSSAMNVMNGSQMHINPAN…
SIO_010081: LOC115908880
subclass of: SO_0000673
so part of: LOC115908880
location: complement(join(2681448..2681601,2684689..2684735,2685188..2685352,2686277..2686452,2687409..2687663,2688735..2688929,2693782..2695397,2695702..2695851,2697345..2697455,2698860..2699006,2699772..2699846,2700276..2700729,2701045..2701219,2702199..2702315,2703025..2703120,2704205..2704367,2705182..2705357,2706577..2706790,2707586..2707728,2709171..2709316,2710076..2710187,2710316..2710461,2726299..2726401,2727085..2727228,2727385..2727512,2728130..2728217,2735413..2735522,2736971..2737162,2737347..2737584,2739978..2740072,2741600..2741833,2742900..2743047,2743907..2744054,2745988..2746144,2766071..2766224,2780812..2781090))
location: region:2681448-2781090:-1
so has part: feature:2780812-2781090:-1:exon
so has part: feature:2766071-2766224:-1:exon
so has part: feature:2745988-2746144:-1:exon
so has part: feature:2743907-2744054:-1:exon
so has part: feature:2742900-2743047:-1:exon
so has part: feature:2741600-2741833:-1:exon
so has part: feature:2739978-2740072:-1:exon
so has part: feature:2737347-2737584:-1:exon
so has part: feature:2736971-2737162:-1:exon
so has part: feature:2735413-2735522:-1:exon
so has part: feature:2728130-2728217:-1:exon
so has part: feature:2727385-2727512:-1:exon
so has part: feature:2727085-2727228:-1:exon
so has part: feature:2726299-2726401:-1:exon
so has part: feature:2710316-2710461:-1:exon
so has part: feature:2710076-2710187:-1:exon
so has part: feature:2709171-2709316:-1:exon
so has part: feature:2707586-2707728:-1:exon
so has part: feature:2706577-2706790:-1:exon
so has part: feature:2705182-2705357:-1:exon
so has part: feature:2704205-2704367:-1:exon
so has part: feature:2703025-2703120:-1:exon
so has part: feature:2702199-2702315:-1:exon
so has part: feature:2701045-2701219:-1:exon
so has part: feature:2700276-2700729:-1:exon
so has part: feature:2699772-2699846:-1:exon
so has part: feature:2698860-2699006:-1:exon
so has part: feature:2697345-2697455:-1:exon
so has part: feature:2695702-2695851:-1:exon
so has part: feature:2693782-2695397:-1:exon
so has part: feature:2688735-2688929:-1:exon
so has part: feature:2687409-2687663:-1:exon
so has part: feature:2686277-2686452:-1:exon
so has part: feature:2685188-2685352:-1:exon
so has part: feature:2684689-2684735:-1:exon
so has part: feature:2681448-2681601:-1:exon

XP_030813623.1
type: Protein
SIO_000068: ncbiprotein

position:2681448:-1
position: 2681448
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2780812-2781090:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2766071-2766224:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2745988-2746144:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2743907-2744054:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2742900-2743047:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2741600-2741833:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2739978-2740072:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2737347-2737584:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2736971-2737162:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2735413-2735522:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:2728130-2728217:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:2727385-2727512:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:2727085-2727228:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:2726299-2726401:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:2710316-2710461:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:2710076-2710187:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:2709171-2709316:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:2707586-2707728:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:2706577-2706790:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:2705182-2705357:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:2704205-2704367:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:2703025-2703120:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:2702199-2702315:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:2701045-2701219:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:2700276-2700729:-1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:2699772-2699846:-1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:2698860-2699006:-1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:2697345-2697455:-1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:2695702-2695851:-1:exon

urn:…
SIO_000300: 30
SIO_000628: feature:2693782-2695397:-1:exon

urn:…
SIO_000300: 31
SIO_000628: feature:2688735-2688929:-1:exon

urn:…
SIO_000300: 32
SIO_000628: feature:2687409-2687663:-1:exon

urn:…
SIO_000300: 33
SIO_000628: feature:2686277-2686452:-1:exon

urn:…
SIO_000300: 34
SIO_000628: feature:2685188-2685352:-1:exon

urn:…
SIO_000300: 35
SIO_000628: feature:2684689-2684735:-1:exon

urn:…
SIO_000300: 36
SIO_000628: feature:2681448-2681601:-1:exon

LOC115908880
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 87175
gene: LOC115908880
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: ankyrin repeat and KH domain-containing protein 1-like isoform X7
translation: MLTDGTAAAAADEEIDSVAPRAPPAAAEPPAAAGPSPLGLRAVRLFGEAGPGGPGGPGAPAAGEAALDFKLAAAVLRSGGGGGSGSDEDEVSEVESFILDQEDLDNPVLKTTSELFLSSAAEGADLRTVDPETQARLEALLEAAGIGKLSTADGKAFADPEVLRRLTSSVSCALDEAAAALTRMRAENNHNNGQVDNRSLAEACSDGDVNAVRKLLDEGRSVNEHTEEGESLLCLACSAGYYELAQVLLAMHANVEDRGNKGDITPLMAAASGGYVDIVKLLLVHCADVNAQSSTGNTALTYACAGGFVDVVKVLLKAGANIEDHNENGHTPLMEAASAGHVEVARVLLEYGAGINTHSNEFKESALTLACYKGHLDMVRFLLEAGADQEHKTDEMHTALMEACMDGHVEVARLLLDSGAQVNMPADSFESPLTLAACGGHVELAALLIERGANLEEVNDEGYTPLMEAAREGHEEMVALLLAQGANINAQTEETQETALTLACCGGFSEVADFLIKAGADIELGCSTPLMEAAQEGHLELVKYLLAAGANVHATTATGDTALTYACENGHTDVADVLLQAGADLEHESEGGRTPLMKAARAGHLCTVQFLISKGANVNRATANNDHTVVSLACAGGHLAVVELLLAHGADPTHRLKDGSTMLIEAAKGGHTNVVSYLLDYPNNVLSVPAADLSQLTPPSQDQSQVPRVPVHTLAMVVPPQEPDRTPQENSPPLLGVVKGASKQKSSSLQVADKDLLPPFHPYQPLECIVEETEGKLNELGQRISAIEKAQLKSLELIQGEPLNKDKIEELKKNREEQVQKKKKILKELQKVERQLQMKTQQQFTKEYLETKGQTDTPPALQQQCSLTGVFPEVEADKGLPEDNFSGLPQVDTILSKDDEQHQSPSPAEQIEFVPIQPLPAPQCNFSGNLGYNGTESLELQKALGNQQNVGQQQQIAGQGLLVQEPDGLMVATPAQTLTDTLDDLIAAVNSRVPSGSTSSSHTTESPTPEPCPQAGSNVPPQSVLPMYPSVDIDAHTESNHDTALTLACAGGHEELVSVLIARGANIEHRDKKGFTPLILAATAGHVGVVEILLDKGGDIEAQSERTKDTPLSLACSGGRQEVVDLLLARGANKEHRNVSDYTPLSLAASGGYVNIIKILLNAGAEINSRTGSKLGISPLMLAAMNGHVPAVKLLLDMGSDINAQIETNRNTALTLACFQGRAEVVSLLLDRKANVEHRAKTGLTPLMEAASGGYAEVGRVLLDKGADVNAPPVPSSRDTALTIAADKGHYKFCELLINRGAHIDVRNKKGNTPLWLAANGGHYDVVQLLVQAGADVDAADNRKITPLMSAFRKGHVKVVQFLVKEVNQFPSDIECMRYIATITDKDLLKKCHQCVETIVKAKDQQAAEANKNATILLKELDLEKSREESRKQALAAKREKRKEKRKKKKEEQKRKQEEDEENKPKETLELQEDDDEEENDDEVEQEVPIEPPSATTTTTIGISATSTTFTNAFGKKRANVVTTPSTNRKNKKNKTKETPQNMQIILPDQHISLAQQKADKNKINGEPRGGGASGNSDSDNLDSTDCNSESSSGGKSQELNFTMDTNSSERRYASLLIPSQEDKNSTSASKTPTRREEDDSEHFTCQVDGQFDITLSSQRLDGEGHSNSLSTTYKSVSLPLSSPNVKLNLTSPKRGQKREEGWKEVVRRQVGRVLKDPPPSNALQPTPIEQFQLQRGGRCCSGAKRSKKLSVPASVVSRIMGRGGCNITAIQDVTGAHIDVDKQKDKNGERMITIRGGTESTRYAVQLINALIQDPAKELEDLIPKTHIRTPASSSKSIHANFSSGVSTATASNKNSFPLGAPPLVTSQSSTLSTFQPPNKLNKNVPANVRSSFPVSLPLAYSHPHFALLAAQTMQQIRHPRLPMAQFGGTFSPSPNTWGPFPVRPVNPGSTNSSPKHNSSSRVGSQNGNVLQTESPGLATSTCPVTASSAAASTQPLCV…
SIO_010081: LOC115908880
subclass of: SO_0000673
so part of: LOC115908880
location: complement(join(2681448..2681601,2684689..2684735,2685188..2685352,2686277..2686452,2687409..2687660,2693782..2695397,2695702..2695851,2697345..2697455,2698860..2699006,2699772..2699846,2700276..2700729,2701045..2701219,2702199..2702315,2703025..2703120,2704205..2704367,2705182..2705357,2706577..2706790,2707586..2707728,2709171..2709316,2710076..2710187,2710316..2710461,2717055..2717798,2726299..2726401,2727085..2727228,2727385..2727512,2728130..2728217,2735413..2735522,2736971..2737162,2737347..2737584,2739978..2740072,2741600..2741833,2742900..2743047,2743907..2744054,2745988..2746144,2766071..2766224,2780812..2781090))
location: region:2681448-2781090:-1
so has part: feature:2780812-2781090:-1:exon
so has part: feature:2766071-2766224:-1:exon
so has part: feature:2745988-2746144:-1:exon
so has part: feature:2743907-2744054:-1:exon
so has part: feature:2742900-2743047:-1:exon
so has part: feature:2741600-2741833:-1:exon
so has part: feature:2739978-2740072:-1:exon
so has part: feature:2737347-2737584:-1:exon
so has part: feature:2736971-2737162:-1:exon
so has part: feature:2735413-2735522:-1:exon
so has part: feature:2728130-2728217:-1:exon
so has part: feature:2727385-2727512:-1:exon
so has part: feature:2727085-2727228:-1:exon
so has part: feature:2726299-2726401:-1:exon
so has part: feature:2717055-2717798:-1:exon
so has part: feature:2710316-2710461:-1:exon
so has part: feature:2710076-2710187:-1:exon
so has part: feature:2709171-2709316:-1:exon
so has part: feature:2707586-2707728:-1:exon
so has part: feature:2706577-2706790:-1:exon
so has part: feature:2705182-2705357:-1:exon
so has part: feature:2704205-2704367:-1:exon
so has part: feature:2703025-2703120:-1:exon
so has part: feature:2702199-2702315:-1:exon
so has part: feature:2701045-2701219:-1:exon
so has part: feature:2700276-2700729:-1:exon
so has part: feature:2699772-2699846:-1:exon
so has part: feature:2698860-2699006:-1:exon
so has part: feature:2697345-2697455:-1:exon
so has part: feature:2695702-2695851:-1:exon
so has part: feature:2693782-2695397:-1:exon
so has part: feature:2687409-2687660:-1:exon
so has part: feature:2686277-2686452:-1:exon
so has part: feature:2685188-2685352:-1:exon
so has part: feature:2684689-2684735:-1:exon
so has part: feature:2681448-2681601:-1:exon

XP_030813622.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:2780812-2781090:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2766071-2766224:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2745988-2746144:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2743907-2744054:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2742900-2743047:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2741600-2741833:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2739978-2740072:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2737347-2737584:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2736971-2737162:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2735413-2735522:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:2728130-2728217:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:2727385-2727512:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:2727085-2727228:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:2726299-2726401:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:2717055-2717798:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:2710316-2710461:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:2710076-2710187:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:2709171-2709316:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:2707586-2707728:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:2706577-2706790:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:2705182-2705357:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:2704205-2704367:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:2703025-2703120:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:2702199-2702315:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:2701045-2701219:-1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:2700276-2700729:-1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:2699772-2699846:-1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:2698860-2699006:-1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:2697345-2697455:-1:exon

urn:…
SIO_000300: 30
SIO_000628: feature:2695702-2695851:-1:exon

urn:…
SIO_000300: 31
SIO_000628: feature:2693782-2695397:-1:exon

urn:…
SIO_000300: 32
SIO_000628: feature:2687409-2687660:-1:exon

urn:…
SIO_000300: 33
SIO_000628: feature:2686277-2686452:-1:exon

urn:…
SIO_000300: 34
SIO_000628: feature:2685188-2685352:-1:exon

urn:…
SIO_000300: 35
SIO_000628: feature:2684689-2684735:-1:exon

urn:…
SIO_000300: 36
SIO_000628: feature:2681448-2681601:-1:exon

LOC115908880
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 87175
gene: LOC115908880
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: ankyrin repeat and KH domain-containing protein 1-like isoform X6
translation: MLTDGTAAAAADEEIDSVAPRAPPAAAEPPAAAGPSPLGLRAVRLFGEAGPGGPGGPGAPAAGEAALDFKLAAAVLRSGGGGGSGSDEDEVSEVESFILDQEDLDNPVLKTTSELFLSSAAEGADLRTVDPETQARLEALLEAAGIGKLSTADGKAFADPEVLRRLTSSVSCALDEAAAALTRMRAENNHNNGQVDNRSLAEACSDGDVNAVRKLLDEGRSVNEHTEEGESLLCLACSAGYYELAQVLLAMHANVEDRGNKGDITPLMAAASGGYVDIVKLLLVHCADVNAQSSTGNTALTYACAGGFVDVVKVLLKAGANIEDHNENGHTPLMEAASAGHVEVARVLLEYGAGINTHSNEFKESALTLACYKGHLDMVRFLLEAGADQEHKTDEMHTALMEACMDGHVEVARLLLDSGAQVNMPADSFESPLTLAACGGHVELAALLIERGANLEEVNDEGYTPLMEAAREGHEEMVALLLAQGANINAQTEETQETALTLACCGGFSEVADFLIKAGADIELGCSTPLMEAAQEGHLELVKYLLAAGANVHATTATGDTALTYACENGHTDVADVLLQAGADLEHESEGGRTPLMKAARAGHLCTVQFLISKGANVNRATANNDHTVVSLACAGGHLAVVELLLAHGADPTHRLKDGSTMLIEAAKGGHTNVVSYLLDYPNNVLSVPAADLSQLTPPSQDQSQVPRVPVHTLAMVVPPQEPDRTPQENSPPLLGVVKGASKQKSSSLQVADKDLLPPFHPYQPLECIVEETEGKLNELGQRISAIEKAQLKSLELIQGEPLNKDKIEELKKNREEQVQKKKKILKELQKVERQLQMKTQQQFTKEYLETKGQTDTPPALQQQCSLTGVFPEVEADKGLPEDNFSGLPQVDTILSKDDEQHQSPSPAEQIEFVPIQPLPAPQCNFSGNLGYNGTESLELQKALGNQQNVGQQQQIAGQGLLVQEPDGLMVATPAQTLTDTLDDLIAAVNSRVPSGSTSSSHTTESPTPEPCPQAGSNVPPQSVLPMYPSVDIDAHTESNHDTALTLACAGGHEELVSVLIARGANIEHRDKKGFTPLILAATAGHVGVVEILLDKGGDIEAQSERTKDTPLSLACSGGRQEVVDLLLARGANKEHRNVSDYTPLSLAASGGYVNIIKILLNAGAEINSRTGSKLGISPLMLAAMNGHVPAVKLLLDMGSDINAQIETNRNTALTLACFQGRAEVVSLLLDRKANVEHRAKTGLTPLMEAASGGYAEVGRVLLDKGADVNAPPVPSSRDTALTIAADKGHYKFCELLINRGAHIDVRNKKGNTPLWLAANGGHYDVVQLLVQAGADVDAADNRKITPLMSAFRKGHVKVVQFLVKEVNQFPSDIECMRYIATITDKDLLKKCHQCVETIVKAKDQQAAEANKNATILLKELDLEKSREESRKQALAAKREKRKEKRKKKKEEQKRKQEEDEENKPKETLELQEDDDEEENDDEVEQEVPIEPPSATTTTTIGISATSTTFTNAFGKKRANVVTTPSTNRKNKKNKTKETPQNMQIILPDQHISLAQQKADKNKINGEPRGGGASGNSDSDNLDSTDCNSESSSGGKSQELNFTMDTNSSERRYASLLIPSQEDKNSTSASKTPTRREEDDSEHFTCQVDGQFDITLSSQRLDGEGHSNSLSTTYKSVSLPLSSPNVKLNLTSPKRGQKREEGWKEVVRRQVGRVLKDPPPSNALQPTPIEQFQLQRGGRCCSGAKRSKKLSVPASVVSRIMGRGGCNITAIQDVTGAHIDVDKQKDKNGERMITIRGGTESTRYAVQLINALIQDPAKELEDLIPKTHIRTPASSSKSIHANFSSGVSTATASNKNSFPLGAPPLVTSQSSTLSTFQPPNKLNKNVPANVRSSFPVSLPLAYSHPHFALLAAQTMQQIRHPRLPMAQFGGTFSPSPNTWGPFPVRPVNPGSTNSSPKHNSSSRVGSQNGNVLQTESPGLATSTCPVTASSAAASTQPLCV…
SIO_010081: LOC115908880
subclass of: SO_0000673
so part of: LOC115908880
location: complement(join(2681448..2681601,2684689..2684735,2685188..2685352,2686277..2686452,2687409..2687663,2693782..2695397,2695702..2695851,2697345..2697455,2698860..2699006,2699772..2699846,2700276..2700729,2701045..2701219,2702199..2702315,2703025..2703120,2704205..2704367,2705182..2705357,2706577..2706790,2707586..2707728,2709171..2709316,2710076..2710187,2710316..2710461,2717055..2717798,2726299..2726401,2727085..2727228,2727385..2727512,2728130..2728217,2735413..2735522,2736971..2737162,2737347..2737584,2739978..2740072,2741600..2741833,2742900..2743047,2743907..2744054,2745988..2746144,2766071..2766224,2780812..2781090))
location: region:2681448-2781090:-1
so has part: feature:2780812-2781090:-1:exon
so has part: feature:2766071-2766224:-1:exon
so has part: feature:2745988-2746144:-1:exon
so has part: feature:2743907-2744054:-1:exon
so has part: feature:2742900-2743047:-1:exon
so has part: feature:2741600-2741833:-1:exon
so has part: feature:2739978-2740072:-1:exon
so has part: feature:2737347-2737584:-1:exon
so has part: feature:2736971-2737162:-1:exon
so has part: feature:2735413-2735522:-1:exon
so has part: feature:2728130-2728217:-1:exon
so has part: feature:2727385-2727512:-1:exon
so has part: feature:2727085-2727228:-1:exon
so has part: feature:2726299-2726401:-1:exon
so has part: feature:2717055-2717798:-1:exon
so has part: feature:2710316-2710461:-1:exon
so has part: feature:2710076-2710187:-1:exon
so has part: feature:2709171-2709316:-1:exon
so has part: feature:2707586-2707728:-1:exon
so has part: feature:2706577-2706790:-1:exon
so has part: feature:2705182-2705357:-1:exon
so has part: feature:2704205-2704367:-1:exon
so has part: feature:2703025-2703120:-1:exon
so has part: feature:2702199-2702315:-1:exon
so has part: feature:2701045-2701219:-1:exon
so has part: feature:2700276-2700729:-1:exon
so has part: feature:2699772-2699846:-1:exon
so has part: feature:2698860-2699006:-1:exon
so has part: feature:2697345-2697455:-1:exon
so has part: feature:2695702-2695851:-1:exon
so has part: feature:2693782-2695397:-1:exon
so has part: feature:2687409-2687663:-1:exon
so has part: feature:2686277-2686452:-1:exon
so has part: feature:2685188-2685352:-1:exon
so has part: feature:2684689-2684735:-1:exon
so has part: feature:2681448-2681601:-1:exon

XP_030813621.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:2780812-2781090:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2766071-2766224:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2745988-2746144:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2743907-2744054:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2742900-2743047:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2741600-2741833:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2739978-2740072:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2737347-2737584:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2736971-2737162:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2735413-2735522:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:2728130-2728217:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:2727385-2727512:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:2727085-2727228:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:2726299-2726401:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:2717055-2717798:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:2710316-2710461:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:2710076-2710187:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:2709171-2709316:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:2707586-2707728:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:2706577-2706790:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:2705182-2705357:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:2704205-2704367:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:2703025-2703120:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:2702199-2702315:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:2701045-2701219:-1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:2700276-2700729:-1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:2699772-2699846:-1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:2698860-2699006:-1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:2697345-2697455:-1:exon

urn:…
SIO_000300: 30
SIO_000628: feature:2695702-2695851:-1:exon

urn:…
SIO_000300: 31
SIO_000628: feature:2693782-2695397:-1:exon

urn:…
SIO_000300: 32
SIO_000628: feature:2687409-2687663:-1:exon

urn:…
SIO_000300: 33
SIO_000628: feature:2686277-2686452:-1:exon

urn:…
SIO_000300: 34
SIO_000628: feature:2685188-2685352:-1:exon

urn:…
SIO_000300: 35
SIO_000628: feature:2684689-2684735:-1:exon

urn:…
SIO_000300: 36
SIO_000628: feature:2681448-2681601:-1:exon

LOC115908880
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 87175
gene: LOC115908880
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: ankyrin repeat and KH domain-containing protein 1-like isoform X5
translation: MLTDGTAAAAADEEIDSVAPRAPPAAAEPPAAAGPSPLGLRAVRLFGEAGPGGPGGPGAPAAGEAALDFKLAAAVLRSGGGGGSGSDEDEVSEVESFILDQEDLDNPVLKTTSELFLSSAAEGADLRTVDPETQARLEALLEAAGIGKLSTADGKAFADPEVLRRLTSSVSCALDEAAAALTRMRAENNHNNGQVDNRSLAEACSDGDVNAVRKLLDEGRSVNEHTEEGESLLCLACSAGYYELAQVLLAMHANVEDRGNKGDITPLMAAASGGYVDIVKLLLVHCADVNAQSSTGNTALTYACAGGFVDVVKVLLKAGANIEDHNENGHTPLMEAASAGHVEVARVLLEYGAGINTHSNEFKESALTLACYKGHLDMVRFLLEAGADQEHKTDEMHTALMEACMDGHVEVARLLLDSGAQVNMPADSFESPLTLAACGGHVELAALLIERGANLEEVNDEGYTPLMEAAREGHEEMVALLLAQGANINAQTEETQETALTLACCGGFSEVADFLIKAGADIELGCSTPLMEAAQEGHLELVKYLLAAGANVHATTATGDTALTYACENGHTDVADVLLQAGADLEHESEGGRTPLMKAARAGHLCTVQFLISKGANVNRATANNDHTVVSLACAGGHLAVVELLLAHGADPTHRLKDGSTMLIEAAKGGHTNVVSYLLDYPNNVLSVPAADLSQLTPPSQDQSQVPRVPVHTLAMVVPPQEPDRTPQENSPPLLGVVKGASKQKSSSLQVADKDLLPPFHPYQPLECIVEETEGKLNELGQRISAIEKAQLKSLELIQGEPLNKDKIEELKKNREEQVQKKKKILKELQKVERQLQMKTQQQFTKEYLETKGQTDTPPALQQQCSLTGVFPEVEADKGLPEDNFSGLPQVDTILSKDDEQHQSPSPAEQIEFVPIQPLPAPQCNFSGNLGYNGTESLELQKALGNQQNVGQQQQIAGQGLLVQEPDGLMVATPAQTLTDTLDDLIAAVNSRVPSGSTSSSHTTESPTPEPCPQAGSNVPPQSVLPMYPSVDIDAHTESNHDTALTLACAGGHEELVSVLIARGANIEHRDKKGFTPLILAATAGHVGVVEILLDKGGDIEAQSERTKDTPLSLACSGGRQEVVDLLLARGANKEHRNVSDYTPLSLAASGGYVNIIKILLNAGAEINSRTGSKLGISPLMLAAMNGHVPAVKLLLDMGSDINAQIETNRNTALTLACFQGRAEVVSLLLDRKANVEHRAKTGLTPLMEAASGGYAEVGRVLLDKGADVNAPPVPSSRDTALTIAADKGHYKFCELLINRGAHIDVRNKKGNTPLWLAANGGHYDVVQLLVQAGADVDAADNRKITPLMSAFRKGHVKVVQFLVKEVNQFPSDIECMRYIATITDKDLLKKCHQCVETIVKAKDQQAAEANKNATILLKELDLEKSREESRKQALAAKREKRKEKRKKKKEEQKRKQEEDEENKPKETLELQEDDDEEENDDEVEQEVPIEPPSATTTTTIGISATSTTFTNAFGKKRANVVTTPSTNRKNKKNKTKETPQNMQIILPDQHISLAQQKADKNKINGEPRGGGASGNSDSDNLDSTDCNSESSSGGKSQELNFTMDTNSSERRYASLLIPSQEDKNSTSASKTPTRREEDDSEHFTCQVDGQFDITLSSQRLDGEGHSNSLSTTYKSVSLPLSSPNVKLNLTSPKRGQKREEGWKEVVRRQVGRVLKDPPPSNALQPTPIEQFQLQRGGRCCSGAKRSKKLSVPASVVSRIMGRGGCNITAIQDVTGAHIDVDKQKDKNGERMITIRGGTESTRYAVQLINALIQDPAKELEDLIPKTHIRTPASSSKSIHANFSSGVSTATASNKNSFPLGAPPLVTSQSSTLSTFQPPNKLNKNVPANVRSSFPVSLPLAYSHPHFALLAAQTMQQIRHPRLPMAQFGGTFSPSPNTWGPFPVRPVNPGSTNSSPKHNSSSRVGSQNGNVLQTESPGLATSTCPVTASSAAASTQPLCV…
SIO_010081: LOC115908880
subclass of: SO_0000673
so part of: LOC115908880
location: complement(join(2681448..2681601,2684689..2684735,2685188..2685352,2686277..2686452,2687409..2687663,2688735..2688881,2693782..2695397,2695702..2695851,2697345..2697455,2698860..2699006,2699772..2699846,2700276..2700729,2701045..2701219,2702199..2702315,2703025..2703120,2704205..2704367,2705182..2705357,2706577..2706790,2707586..2707728,2709171..2709316,2710076..2710187,2710316..2710461,2717055..2717798,2726299..2726401,2727085..2727228,2727385..2727512,2728130..2728217,2735413..2735522,2736971..2737162,2737347..2737584,2739978..2740072,2741600..2741833,2742900..2743047,2743907..2744054,2745988..2746144,2766071..2766224,2780812..2781090))
location: region:2681448-2781090:-1
so has part: feature:2780812-2781090:-1:exon
so has part: feature:2766071-2766224:-1:exon
so has part: feature:2745988-2746144:-1:exon
so has part: feature:2743907-2744054:-1:exon
so has part: feature:2742900-2743047:-1:exon
so has part: feature:2741600-2741833:-1:exon
so has part: feature:2739978-2740072:-1:exon
so has part: feature:2737347-2737584:-1:exon
so has part: feature:2736971-2737162:-1:exon
so has part: feature:2735413-2735522:-1:exon
so has part: feature:2728130-2728217:-1:exon
so has part: feature:2727385-2727512:-1:exon
so has part: feature:2727085-2727228:-1:exon
so has part: feature:2726299-2726401:-1:exon
so has part: feature:2717055-2717798:-1:exon
so has part: feature:2710316-2710461:-1:exon
so has part: feature:2710076-2710187:-1:exon
so has part: feature:2709171-2709316:-1:exon
so has part: feature:2707586-2707728:-1:exon
so has part: feature:2706577-2706790:-1:exon
so has part: feature:2705182-2705357:-1:exon
so has part: feature:2704205-2704367:-1:exon
so has part: feature:2703025-2703120:-1:exon
so has part: feature:2702199-2702315:-1:exon
so has part: feature:2701045-2701219:-1:exon
so has part: feature:2700276-2700729:-1:exon
so has part: feature:2699772-2699846:-1:exon
so has part: feature:2698860-2699006:-1:exon
so has part: feature:2697345-2697455:-1:exon
so has part: feature:2695702-2695851:-1:exon
so has part: feature:2693782-2695397:-1:exon
so has part: feature:2688735-2688881:-1:exon
so has part: feature:2687409-2687663:-1:exon
so has part: feature:2686277-2686452:-1:exon
so has part: feature:2685188-2685352:-1:exon
so has part: feature:2684689-2684735:-1:exon
so has part: feature:2681448-2681601:-1:exon

XP_030813620.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:2780812-2781090:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2766071-2766224:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2745988-2746144:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2743907-2744054:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2742900-2743047:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2741600-2741833:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2739978-2740072:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2737347-2737584:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2736971-2737162:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2735413-2735522:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:2728130-2728217:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:2727385-2727512:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:2727085-2727228:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:2726299-2726401:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:2717055-2717798:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:2710316-2710461:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:2710076-2710187:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:2709171-2709316:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:2707586-2707728:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:2706577-2706790:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:2705182-2705357:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:2704205-2704367:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:2703025-2703120:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:2702199-2702315:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:2701045-2701219:-1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:2700276-2700729:-1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:2699772-2699846:-1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:2698860-2699006:-1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:2697345-2697455:-1:exon

urn:…
SIO_000300: 30
SIO_000628: feature:2695702-2695851:-1:exon

urn:…
SIO_000300: 31
SIO_000628: feature:2693782-2695397:-1:exon

urn:…
SIO_000300: 32
SIO_000628: feature:2688735-2688881:-1:exon

urn:…
SIO_000300: 33
SIO_000628: feature:2687409-2687663:-1:exon

urn:…
SIO_000300: 34
SIO_000628: feature:2686277-2686452:-1:exon

urn:…
SIO_000300: 35
SIO_000628: feature:2685188-2685352:-1:exon

urn:…
SIO_000300: 36
SIO_000628: feature:2684689-2684735:-1:exon

urn:…
SIO_000300: 37
SIO_000628: feature:2681448-2681601:-1:exon

LOC115908880
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 87175
gene: LOC115908880
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: ankyrin repeat and KH domain-containing protein 1-like isoform X4
translation: MLTDGTAAAAADEEIDSVAPRAPPAAAEPPAAAGPSPLGLRAVRLFGEAGPGGPGGPGAPAAGEAALDFKLAAAVLRSGGGGGSGSDEDEVSEVESFILDQEDLDNPVLKTTSELFLSSAAEGADLRTVDPETQARLEALLEAAGIGKLSTADGKAFADPEVLRRLTSSVSCALDEAAAALTRMRAENNHNNGQVDNRSLAEACSDGDVNAVRKLLDEGRSVNEHTEEGESLLCLACSAGYYELAQVLLAMHANVEDRGNKGDITPLMAAASGGYVDIVKLLLVHCADVNAQSSTGNTALTYACAGGFVDVVKVLLKAGANIEDHNENGHTPLMEAASAGHVEVARVLLEYGAGINTHSNEFKESALTLACYKGHLDMVRFLLEAGADQEHKTDEMHTALMEACMDGHVEVARLLLDSGAQVNMPADSFESPLTLAACGGHVELAALLIERGANLEEVNDEGYTPLMEAAREGHEEMVALLLAQGANINAQTEETQETALTLACCGGFSEVADFLIKAGADIELGCSTPLMEAAQEGHLELVKYLLAAGANVHATTATGDTALTYACENGHTDVADVLLQAGADLEHESEGGRTPLMKAARAGHLCTVQFLISKGANVNRATANNDHTVVSLACAGGHLAVVELLLAHGADPTHRLKDGSTMLIEAAKGGHTNVVSYLLDYPNNVLSVPAADLSQLTPPSQDQSQVPRVPVHTLAMVVPPQEPDRTPQENSPPLLGVVKGASKQKSSSLQVADKDLLPPFHPYQPLECIVEETEGKLNELGQRISAIEKAQLKSLELIQGEPLNKDKIEELKKNREEQVQKKKKILKELQKVERQLQMKTQQQFTKEYLETKGQTDTPPALQQQCSLTGVFPEVEADKGLPEDNFSGLPQVDTILSKDDEQHQSPSPAEQIEFVPIQPLPAPQCNFSGNLGYNGTESLELQKALGNQQNVGQQQQIAGQGLLVQEPDGLMVATPAQTLTDTLDDLIAAVNSRVPSGSTSSSHTTESPTPEPCPQAGSNVPPQSVLPMYPSVDIDAHTESNHDTALTLACAGGHEELVSVLIARGANIEHRDKKGFTPLILAATAGHVGVVEILLDKGGDIEAQSERTKDTPLSLACSGGRQEVVDLLLARGANKEHRNVSDYTPLSLAASGGYVNIIKILLNAGAEINSRTGSKLGISPLMLAAMNGHVPAVKLLLDMGSDINAQIETNRNTALTLACFQGRAEVVSLLLDRKANVEHRAKTGLTPLMEAASGGYAEVGRVLLDKGADVNAPPVPSSRDTALTIAADKGHYKFCELLINRGAHIDVRNKKGNTPLWLAANGGHYDVVQLLVQAGADVDAADNRKITPLMSAFRKGHVKVVQFLVKEVNQFPSDIECMRYIATITDKDLLKKCHQCVETIVKAKDQQAAEANKNATILLKELDLEKSREESRKQALAAKREKRKEKRKKKKEEQKRKQEEDEENKPKETLELQEDDDEEENDDEVEQEVPIEPPSATTTTTIGISATSTTFTNAFGKKRANVVTTPSTNRKNKKNKTKETPQNMQIILPDQHISLAQQKADKNKINGEPRGGGASGNSDSDNLDSTDCNSESSSGGKSQELNFTMDTNSSERRYASLLIPSQEDKNSTSASKTPTRREEDDSEHFTCQVDGQFDITLSSQRLDGEGHSNSLSTTYKSVSLPLSSPNVKLNLTSPKRGQKREEGWKEVVRRQVGRVLKDPPPSNALQPTPIEQFQLQRGGRCCSGAKRSKKLSVPASVVSRIMGRGGCNITAIQDVTGAHIDVDKQKDKNGERMITIRGGTESTRYAVQLINALIQDPAKELEDLIPKTHIRTPASSSKSIHANFSSGVSTATASNKNSFPLGAPPLVTSQSSTLSTFQPPNKLNKNVPANVRSSFPVSLPLAYSHPHFALLAAQTMQQIRHPRLPMAQFGGTFSPSPNTWGPFPVRPVNPGSTNSSPKHNSSSRVGSQNGNVLQTESPGLATSTCPVTASSAAASTQPLCV…
SIO_010081: LOC115908880
subclass of: SO_0000673
so part of: LOC115908880
location: complement(join(2681448..2681601,2684689..2684735,2685188..2685352,2686277..2686452,2687409..2687639,2688750..2688929,2693782..2695397,2695702..2695851,2697345..2697455,2698860..2699006,2699772..2699846,2700276..2700729,2701045..2701219,2702199..2702315,2703025..2703120,2704205..2704367,2705182..2705357,2706577..2706790,2707586..2707728,2709171..2709316,2710076..2710187,2710316..2710461,2717055..2717798,2726299..2726401,2727085..2727228,2727385..2727512,2728130..2728217,2735413..2735522,2736971..2737162,2737347..2737584,2739978..2740072,2741600..2741833,2742900..2743047,2743907..2744054,2745988..2746144,2766071..2766224,2780812..2781090))
location: region:2681448-2781090:-1
so has part: feature:2780812-2781090:-1:exon
so has part: feature:2766071-2766224:-1:exon
so has part: feature:2745988-2746144:-1:exon
so has part: feature:2743907-2744054:-1:exon
so has part: feature:2742900-2743047:-1:exon
so has part: feature:2741600-2741833:-1:exon
so has part: feature:2739978-2740072:-1:exon
so has part: feature:2737347-2737584:-1:exon
so has part: feature:2736971-2737162:-1:exon
so has part: feature:2735413-2735522:-1:exon
so has part: feature:2728130-2728217:-1:exon
so has part: feature:2727385-2727512:-1:exon
so has part: feature:2727085-2727228:-1:exon
so has part: feature:2726299-2726401:-1:exon
so has part: feature:2717055-2717798:-1:exon
so has part: feature:2710316-2710461:-1:exon
so has part: feature:2710076-2710187:-1:exon
so has part: feature:2709171-2709316:-1:exon
so has part: feature:2707586-2707728:-1:exon
so has part: feature:2706577-2706790:-1:exon
so has part: feature:2705182-2705357:-1:exon
so has part: feature:2704205-2704367:-1:exon
so has part: feature:2703025-2703120:-1:exon
so has part: feature:2702199-2702315:-1:exon
so has part: feature:2701045-2701219:-1:exon
so has part: feature:2700276-2700729:-1:exon
so has part: feature:2699772-2699846:-1:exon
so has part: feature:2698860-2699006:-1:exon
so has part: feature:2697345-2697455:-1:exon
so has part: feature:2695702-2695851:-1:exon
so has part: feature:2693782-2695397:-1:exon
so has part: feature:2688750-2688929:-1:exon
so has part: feature:2687409-2687639:-1:exon
so has part: feature:2686277-2686452:-1:exon
so has part: feature:2685188-2685352:-1:exon
so has part: feature:2684689-2684735:-1:exon
so has part: feature:2681448-2681601:-1:exon

XP_030813618.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:2780812-2781090:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2766071-2766224:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2745988-2746144:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2743907-2744054:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2742900-2743047:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2741600-2741833:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2739978-2740072:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2737347-2737584:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2736971-2737162:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2735413-2735522:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:2728130-2728217:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:2727385-2727512:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:2727085-2727228:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:2726299-2726401:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:2717055-2717798:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:2710316-2710461:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:2710076-2710187:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:2709171-2709316:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:2707586-2707728:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:2706577-2706790:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:2705182-2705357:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:2704205-2704367:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:2703025-2703120:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:2702199-2702315:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:2701045-2701219:-1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:2700276-2700729:-1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:2699772-2699846:-1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:2698860-2699006:-1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:2697345-2697455:-1:exon

urn:…
SIO_000300: 30
SIO_000628: feature:2695702-2695851:-1:exon

urn:…
SIO_000300: 31
SIO_000628: feature:2693782-2695397:-1:exon

urn:…
SIO_000300: 32
SIO_000628: feature:2688750-2688929:-1:exon

urn:…
SIO_000300: 33
SIO_000628: feature:2687409-2687639:-1:exon

urn:…
SIO_000300: 34
SIO_000628: feature:2686277-2686452:-1:exon

urn:…
SIO_000300: 35
SIO_000628: feature:2685188-2685352:-1:exon

urn:…
SIO_000300: 36
SIO_000628: feature:2684689-2684735:-1:exon

urn:…
SIO_000300: 37
SIO_000628: feature:2681448-2681601:-1:exon

LOC115908880
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 87175
gene: LOC115908880
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: ankyrin repeat and KH domain-containing protein 1-like isoform X3
translation: MLTDGTAAAAADEEIDSVAPRAPPAAAEPPAAAGPSPLGLRAVRLFGEAGPGGPGGPGAPAAGEAALDFKLAAAVLRSGGGGGSGSDEDEVSEVESFILDQEDLDNPVLKTTSELFLSSAAEGADLRTVDPETQARLEALLEAAGIGKLSTADGKAFADPEVLRRLTSSVSCALDEAAAALTRMRAENNHNNGQVDNRSLAEACSDGDVNAVRKLLDEGRSVNEHTEEGESLLCLACSAGYYELAQVLLAMHANVEDRGNKGDITPLMAAASGGYVDIVKLLLVHCADVNAQSSTGNTALTYACAGGFVDVVKVLLKAGANIEDHNENGHTPLMEAASAGHVEVARVLLEYGAGINTHSNEFKESALTLACYKGHLDMVRFLLEAGADQEHKTDEMHTALMEACMDGHVEVARLLLDSGAQVNMPADSFESPLTLAACGGHVELAALLIERGANLEEVNDEGYTPLMEAAREGHEEMVALLLAQGANINAQTEETQETALTLACCGGFSEVADFLIKAGADIELGCSTPLMEAAQEGHLELVKYLLAAGANVHATTATGDTALTYACENGHTDVADVLLQAGADLEHESEGGRTPLMKAARAGHLCTVQFLISKGANVNRATANNDHTVVSLACAGGHLAVVELLLAHGADPTHRLKDGSTMLIEAAKGGHTNVVSYLLDYPNNVLSVPAADLSQLTPPSQDQSQVPRVPVHTLAMVVPPQEPDRTPQENSPPLLGVVKGASKQKSSSLQVADKDLLPPFHPYQPLECIVEETEGKLNELGQRISAIEKAQLKSLELIQGEPLNKDKIEELKKNREEQVQKKKKILKELQKVERQLQMKTQQQFTKEYLETKGQTDTPPALQQQCSLTGVFPEVEADKGLPEDNFSGLPQVDTILSKDDEQHQSPSPAEQIEFVPIQPLPAPQCNFSGNLGYNGTESLELQKALGNQQNVGQQQQIAGQGLLVQEPDGLMVATPAQTLTDTLDDLIAAVNSRVPSGSTSSSHTTESPTPEPCPQAGSNVPPQSVLPMYPSVDIDAHTESNHDTALTLACAGGHEELVSVLIARGANIEHRDKKGFTPLILAATAGHVGVVEILLDKGGDIEAQSERTKDTPLSLACSGGRQEVVDLLLARGANKEHRNVSDYTPLSLAASGGYVNIIKILLNAGAEINSRTGSKLGISPLMLAAMNGHVPAVKLLLDMGSDINAQIETNRNTALTLACFQGRAEVVSLLLDRKANVEHRAKTGLTPLMEAASGGYAEVGRVLLDKGADVNAPPVPSSRDTALTIAADKGHYKFCELLINRGAHIDVRNKKGNTPLWLAANGGHYDVVQLLVQAGADVDAADNRKITPLMSAFRKGHVKVVQFLVKEVNQFPSDIECMRYIATITDKDLLKKCHQCVETIVKAKDQQAAEANKNATILLKELDLEKSREESRKQALAAKREKRKEKRKKKKEEQKRKQEEDEENKPKETLELQEDDDEEENDDEVEQEVPIEPPSATTTTTIGISATSTTFTNAFGKKRANVVTTPSTNRKNKKNKTKETPQNMQIILPDQHISLAQQKADKNKINGEPRGGGASGNSDSDNLDSTDCNSESSSGGKSQELNFTMDTNSSERRYASLLIPSQEDKNSTSASKTPTRREEDDSEHFTCQVDGQFDITLSSQRLDGEGHSNSLSTTYKSVSLPLSSPNVKLNLTSPKRGQKREEGWKEVVRRQVGRVLKDPPPSNALQPTPIEQFQLQRGGRCCSGAKRSKKLSVPASVVSRIMGRGGCNITAIQDVTGAHIDVDKQKDKNGERMITIRGGTESTRYAVQLINALIQDPAKELEDLIPKTHIRTPASSSKSIHANFSSGVSTATASNKNSFPLGAPPLVTSQSSTLSTFQPPNKLNKNVPANVRSSFPVSLPLAYSHPHFALLAAQTMQQIRHPRLPMAQFGGTFSPSPNTWGPFPVRPVNPGSTNSSPKHNSSSRVGSQNGNVLQTESPGLATSTCPVTASSAAASTQPLCV…
SIO_010081: LOC115908880
subclass of: SO_0000673
so part of: LOC115908880
location: complement(join(2681448..2681601,2684689..2684735,2685188..2685352,2686277..2686452,2687409..2687660,2688750..2688929,2693782..2695397,2695702..2695851,2697345..2697455,2698860..2699006,2699772..2699846,2700276..2700729,2701045..2701219,2702199..2702315,2703025..2703120,2704205..2704367,2705182..2705357,2706577..2706790,2707586..2707728,2709171..2709316,2710076..2710187,2710316..2710461,2717055..2717798,2726299..2726401,2727085..2727228,2727385..2727512,2728130..2728217,2735413..2735522,2736971..2737162,2737347..2737584,2739978..2740072,2741600..2741833,2742900..2743047,2743907..2744054,2745988..2746144,2766071..2766224,2780812..2781090))
location: region:2681448-2781090:-1
so has part: feature:2780812-2781090:-1:exon
so has part: feature:2766071-2766224:-1:exon
so has part: feature:2745988-2746144:-1:exon
so has part: feature:2743907-2744054:-1:exon
so has part: feature:2742900-2743047:-1:exon
so has part: feature:2741600-2741833:-1:exon
so has part: feature:2739978-2740072:-1:exon
so has part: feature:2737347-2737584:-1:exon
so has part: feature:2736971-2737162:-1:exon
so has part: feature:2735413-2735522:-1:exon
so has part: feature:2728130-2728217:-1:exon
so has part: feature:2727385-2727512:-1:exon
so has part: feature:2727085-2727228:-1:exon
so has part: feature:2726299-2726401:-1:exon
so has part: feature:2717055-2717798:-1:exon
so has part: feature:2710316-2710461:-1:exon
so has part: feature:2710076-2710187:-1:exon
so has part: feature:2709171-2709316:-1:exon
so has part: feature:2707586-2707728:-1:exon
so has part: feature:2706577-2706790:-1:exon
so has part: feature:2705182-2705357:-1:exon
so has part: feature:2704205-2704367:-1:exon
so has part: feature:2703025-2703120:-1:exon
so has part: feature:2702199-2702315:-1:exon
so has part: feature:2701045-2701219:-1:exon
so has part: feature:2700276-2700729:-1:exon
so has part: feature:2699772-2699846:-1:exon
so has part: feature:2698860-2699006:-1:exon
so has part: feature:2697345-2697455:-1:exon
so has part: feature:2695702-2695851:-1:exon
so has part: feature:2693782-2695397:-1:exon
so has part: feature:2688750-2688929:-1:exon
so has part: feature:2687409-2687660:-1:exon
so has part: feature:2686277-2686452:-1:exon
so has part: feature:2685188-2685352:-1:exon
so has part: feature:2684689-2684735:-1:exon
so has part: feature:2681448-2681601:-1:exon

XP_030813617.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:2780812-2781090:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2766071-2766224:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2745988-2746144:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2743907-2744054:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2742900-2743047:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2741600-2741833:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2739978-2740072:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2737347-2737584:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2736971-2737162:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2735413-2735522:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:2728130-2728217:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:2727385-2727512:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:2727085-2727228:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:2726299-2726401:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:2717055-2717798:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:2710316-2710461:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:2710076-2710187:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:2709171-2709316:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:2707586-2707728:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:2706577-2706790:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:2705182-2705357:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:2704205-2704367:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:2703025-2703120:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:2702199-2702315:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:2701045-2701219:-1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:2700276-2700729:-1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:2699772-2699846:-1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:2698860-2699006:-1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:2697345-2697455:-1:exon

urn:…
SIO_000300: 30
SIO_000628: feature:2695702-2695851:-1:exon

urn:…
SIO_000300: 31
SIO_000628: feature:2693782-2695397:-1:exon

urn:…
SIO_000300: 32
SIO_000628: feature:2688750-2688929:-1:exon

urn:…
SIO_000300: 33
SIO_000628: feature:2687409-2687660:-1:exon

urn:…
SIO_000300: 34
SIO_000628: feature:2686277-2686452:-1:exon

urn:…
SIO_000300: 35
SIO_000628: feature:2685188-2685352:-1:exon

urn:…
SIO_000300: 36
SIO_000628: feature:2684689-2684735:-1:exon

urn:…
SIO_000300: 37
SIO_000628: feature:2681448-2681601:-1:exon

LOC115908880
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 87175
gene: LOC115908880
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: ankyrin repeat and KH domain-containing protein 1-like isoform X2
translation: MLTDGTAAAAADEEIDSVAPRAPPAAAEPPAAAGPSPLGLRAVRLFGEAGPGGPGGPGAPAAGEAALDFKLAAAVLRSGGGGGSGSDEDEVSEVESFILDQEDLDNPVLKTTSELFLSSAAEGADLRTVDPETQARLEALLEAAGIGKLSTADGKAFADPEVLRRLTSSVSCALDEAAAALTRMRAENNHNNGQVDNRSLAEACSDGDVNAVRKLLDEGRSVNEHTEEGESLLCLACSAGYYELAQVLLAMHANVEDRGNKGDITPLMAAASGGYVDIVKLLLVHCADVNAQSSTGNTALTYACAGGFVDVVKVLLKAGANIEDHNENGHTPLMEAASAGHVEVARVLLEYGAGINTHSNEFKESALTLACYKGHLDMVRFLLEAGADQEHKTDEMHTALMEACMDGHVEVARLLLDSGAQVNMPADSFESPLTLAACGGHVELAALLIERGANLEEVNDEGYTPLMEAAREGHEEMVALLLAQGANINAQTEETQETALTLACCGGFSEVADFLIKAGADIELGCSTPLMEAAQEGHLELVKYLLAAGANVHATTATGDTALTYACENGHTDVADVLLQAGADLEHESEGGRTPLMKAARAGHLCTVQFLISKGANVNRATANNDHTVVSLACAGGHLAVVELLLAHGADPTHRLKDGSTMLIEAAKGGHTNVVSYLLDYPNNVLSVPAADLSQLTPPSQDQSQVPRVPVHTLAMVVPPQEPDRTPQENSPPLLGVVKGASKQKSSSLQVADKDLLPPFHPYQPLECIVEETEGKLNELGQRISAIEKAQLKSLELIQGEPLNKDKIEELKKNREEQVQKKKKILKELQKVERQLQMKTQQQFTKEYLETKGQTDTPPALQQQCSLTGVFPEVEADKGLPEDNFSGLPQVDTILSKDDEQHQSPSPAEQIEFVPIQPLPAPQCNFSGNLGYNGTESLELQKALGNQQNVGQQQQIAGQGLLVQEPDGLMVATPAQTLTDTLDDLIAAVNSRVPSGSTSSSHTTESPTPEPCPQAGSNVPPQSVLPMYPSVDIDAHTESNHDTALTLACAGGHEELVSVLIARGANIEHRDKKGFTPLILAATAGHVGVVEILLDKGGDIEAQSERTKDTPLSLACSGGRQEVVDLLLARGANKEHRNVSDYTPLSLAASGGYVNIIKILLNAGAEINSRTGSKLGISPLMLAAMNGHVPAVKLLLDMGSDINAQIETNRNTALTLACFQGRAEVVSLLLDRKANVEHRAKTGLTPLMEAASGGYAEVGRVLLDKGADVNAPPVPSSRDTALTIAADKGHYKFCELLINRGAHIDVRNKKGNTPLWLAANGGHYDVVQLLVQAGADVDAADNRKITPLMSAFRKGHVKVVQFLVKEVNQFPSDIECMRYIATITDKDLLKKCHQCVETIVKAKDQQAAEANKNATILLKELDLEKSREESRKQALAAKREKRKEKRKKKKEEQKRKQEEDEENKPKETLELQEDDDEEENDDEVEQEVPIEPPSATTTTTIGISATSTTFTNAFGKKRANVVTTPSTNRKNKKNKTKETPQNMQIILPDQHISLAQQKADKNKINGEPRGGGASGNSDSDNLDSTDCNSESSSGGKSQELNFTMDTNSSERRYASLLIPSQEDKNSTSASKTPTRREEDDSEHFTCQVDGQFDITLSSQRLDGEGHSNSLSTTYKSVSLPLSSPNVKLNLTSPKRGQKREEGWKEVVRRQVGRVLKDPPPSNALQPTPIEQFQLQRGGRCCSGAKRSKKLSVPASVVSRIMGRGGCNITAIQDVTGAHIDVDKQKDKNGERMITIRGGTESTRYAVQLINALIQDPAKELEDLIPKTHIRTPASSSKSIHANFSSGVSTATASNKNSFPLGAPPLVTSQSSTLSTFQPPNKLNKNVPANVRSSFPVSLPLAYSHPHFALLAAQTMQQIRHPRLPMAQFGGTFSPSPNTWGPFPVRPVNPGSTNSSPKHNSSSRVGSQNGNVLQTESPGLATSTCPVTASSAAASTQPLCV…
SIO_010081: LOC115908880
subclass of: SO_0000673
so part of: LOC115908880
location: complement(join(2681448..2681601,2684689..2684735,2685188..2685352,2686277..2686452,2687409..2687663,2688750..2688929,2693782..2695397,2695702..2695851,2697345..2697455,2698860..2699006,2699772..2699846,2700276..2700729,2701045..2701219,2702199..2702315,2703025..2703120,2704205..2704367,2705182..2705357,2706577..2706790,2707586..2707728,2709171..2709316,2710076..2710187,2710316..2710461,2717055..2717798,2726299..2726401,2727085..2727228,2727385..2727512,2728130..2728217,2735413..2735522,2736971..2737162,2737347..2737584,2739978..2740072,2741600..2741833,2742900..2743047,2743907..2744054,2745988..2746144,2766071..2766224,2780812..2781090))
location: region:2681448-2781090:-1
so has part: feature:2780812-2781090:-1:exon
so has part: feature:2766071-2766224:-1:exon
so has part: feature:2745988-2746144:-1:exon
so has part: feature:2743907-2744054:-1:exon
so has part: feature:2742900-2743047:-1:exon
so has part: feature:2741600-2741833:-1:exon
so has part: feature:2739978-2740072:-1:exon
so has part: feature:2737347-2737584:-1:exon
so has part: feature:2736971-2737162:-1:exon
so has part: feature:2735413-2735522:-1:exon
so has part: feature:2728130-2728217:-1:exon
so has part: feature:2727385-2727512:-1:exon
so has part: feature:2727085-2727228:-1:exon
so has part: feature:2726299-2726401:-1:exon
so has part: feature:2717055-2717798:-1:exon
so has part: feature:2710316-2710461:-1:exon
so has part: feature:2710076-2710187:-1:exon
so has part: feature:2709171-2709316:-1:exon
so has part: feature:2707586-2707728:-1:exon
so has part: feature:2706577-2706790:-1:exon
so has part: feature:2705182-2705357:-1:exon
so has part: feature:2704205-2704367:-1:exon
so has part: feature:2703025-2703120:-1:exon
so has part: feature:2702199-2702315:-1:exon
so has part: feature:2701045-2701219:-1:exon
so has part: feature:2700276-2700729:-1:exon
so has part: feature:2699772-2699846:-1:exon
so has part: feature:2698860-2699006:-1:exon
so has part: feature:2697345-2697455:-1:exon
so has part: feature:2695702-2695851:-1:exon
so has part: feature:2693782-2695397:-1:exon
so has part: feature:2688750-2688929:-1:exon
so has part: feature:2687409-2687663:-1:exon
so has part: feature:2686277-2686452:-1:exon
so has part: feature:2685188-2685352:-1:exon
so has part: feature:2684689-2684735:-1:exon
so has part: feature:2681448-2681601:-1:exon

XP_030813616.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:2780812-2781090:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2766071-2766224:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2745988-2746144:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2743907-2744054:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2742900-2743047:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2741600-2741833:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2739978-2740072:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2737347-2737584:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2736971-2737162:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2735413-2735522:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:2728130-2728217:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:2727385-2727512:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:2727085-2727228:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:2726299-2726401:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:2717055-2717798:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:2710316-2710461:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:2710076-2710187:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:2709171-2709316:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:2707586-2707728:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:2706577-2706790:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:2705182-2705357:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:2704205-2704367:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:2703025-2703120:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:2702199-2702315:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:2701045-2701219:-1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:2700276-2700729:-1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:2699772-2699846:-1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:2698860-2699006:-1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:2697345-2697455:-1:exon

urn:…
SIO_000300: 30
SIO_000628: feature:2695702-2695851:-1:exon

urn:…
SIO_000300: 31
SIO_000628: feature:2693782-2695397:-1:exon

urn:…
SIO_000300: 32
SIO_000628: feature:2688750-2688929:-1:exon

urn:…
SIO_000300: 33
SIO_000628: feature:2687409-2687663:-1:exon

urn:…
SIO_000300: 34
SIO_000628: feature:2686277-2686452:-1:exon

urn:…
SIO_000300: 35
SIO_000628: feature:2685188-2685352:-1:exon

urn:…
SIO_000300: 36
SIO_000628: feature:2684689-2684735:-1:exon

urn:…
SIO_000300: 37
SIO_000628: feature:2681448-2681601:-1:exon

LOC115908880
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 87175
gene: LOC115908880
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: ankyrin repeat and KH domain-containing protein 1-like isoform X1
translation: MLTDGTAAAAADEEIDSVAPRAPPAAAEPPAAAGPSPLGLRAVRLFGEAGPGGPGGPGAPAAGEAALDFKLAAAVLRSGGGGGSGSDEDEVSEVESFILDQEDLDNPVLKTTSELFLSSAAEGADLRTVDPETQARLEALLEAAGIGKLSTADGKAFADPEVLRRLTSSVSCALDEAAAALTRMRAENNHNNGQVDNRSLAEACSDGDVNAVRKLLDEGRSVNEHTEEGESLLCLACSAGYYELAQVLLAMHANVEDRGNKGDITPLMAAASGGYVDIVKLLLVHCADVNAQSSTGNTALTYACAGGFVDVVKVLLKAGANIEDHNENGHTPLMEAASAGHVEVARVLLEYGAGINTHSNEFKESALTLACYKGHLDMVRFLLEAGADQEHKTDEMHTALMEACMDGHVEVARLLLDSGAQVNMPADSFESPLTLAACGGHVELAALLIERGANLEEVNDEGYTPLMEAAREGHEEMVALLLAQGANINAQTEETQETALTLACCGGFSEVADFLIKAGADIELGCSTPLMEAAQEGHLELVKYLLAAGANVHATTATGDTALTYACENGHTDVADVLLQAGADLEHESEGGRTPLMKAARAGHLCTVQFLISKGANVNRATANNDHTVVSLACAGGHLAVVELLLAHGADPTHRLKDGSTMLIEAAKGGHTNVVSYLLDYPNNVLSVPAADLSQLTPPSQDQSQVPRVPVHTLAMVVPPQEPDRTPQENSPPLLGVVKGASKQKSSSLQVADKDLLPPFHPYQPLECIVEETEGKLNELGQRISAIEKAQLKSLELIQGEPLNKDKIEELKKNREEQVQKKKKILKELQKVERQLQMKTQQQFTKEYLETKGQTDTPPALQQQCSLTGVFPEVEADKGLPEDNFSGLPQVDTILSKDDEQHQSPSPAEQIEFVPIQPLPAPQCNFSGNLGYNGTESLELQKALGNQQNVGQQQQIAGQGLLVQEPDGLMVATPAQTLTDTLDDLIAAVNSRVPSGSTSSSHTTESPTPEPCPQAGSNVPPQSVLPMYPSVDIDAHTESNHDTALTLACAGGHEELVSVLIARGANIEHRDKKGFTPLILAATAGHVGVVEILLDKGGDIEAQSERTKDTPLSLACSGGRQEVVDLLLARGANKEHRNVSDYTPLSLAASGGYVNIIKILLNAGAEINSRTGSKLGISPLMLAAMNGHVPAVKLLLDMGSDINAQIETNRNTALTLACFQGRAEVVSLLLDRKANVEHRAKTGLTPLMEAASGGYAEVGRVLLDKGADVNAPPVPSSRDTALTIAADKGHYKFCELLINRGAHIDVRNKKGNTPLWLAANGGHYDVVQLLVQAGADVDAADNRKITPLMSAFRKGHVKVVQFLVKEVNQFPSDIECMRYIATITDKDLLKKCHQCVETIVKAKDQQAAEANKNATILLKELDLEKSREESRKQALAAKREKRKEKRKKKKEEQKRKQEEDEENKPKETLELQEDDDEEENDDEVEQEVPIEPPSATTTTTIGISATSTTFTNAFGKKRANVVTTPSTNRKNKKNKTKETPQNMQIILPDQHISLAQQKADKNKINGEPRGGGASGNSDSDNLDSTDCNSESSSGGKSQELNFTMDTNSSERRYASLLIPSQEDKNSTSASKTPTRREEDDSEHFTCQVDGQFDITLSSQRLDGEGHSNSLSTTYKSVSLPLSSPNVKLNLTSPKRGQKREEGWKEVVRRQVGRVLKDPPPSNALQPTPIEQFQLQRGGRCCSGAKRSKKLSVPASVVSRIMGRGGCNITAIQDVTGAHIDVDKQKDKNGERMITIRGGTESTRYAVQLINALIQDPAKELEDLIPKTHIRTPASSSKSIHANFSSGVSTATASNKNSFPLGAPPLVTSQSSTLSTFQPPNKLNKNVPANVRSSFPVSLPLAYSHPHFALLAAQTMQQIRHPRLPMAQFGGTFSPSPNTWGPFPVRPVNPGSTNSSPKHNSSSRVGSQNGNVLQTESPGLATSTCPVTASSAAASTQPLCV…
SIO_010081: LOC115908880
subclass of: SO_0000673
so part of: LOC115908880
location: complement(join(2681448..2681601,2684689..2684735,2685188..2685352,2686277..2686452,2687409..2687663,2688735..2688929,2693782..2695397,2695702..2695851,2697345..2697455,2698860..2699006,2699772..2699846,2700276..2700729,2701045..2701219,2702199..2702315,2703025..2703120,2704205..2704367,2705182..2705357,2706577..2706790,2707586..2707728,2709171..2709316,2710076..2710187,2710316..2710461,2717055..2717798,2726299..2726401,2727085..2727228,2727385..2727512,2728130..2728217,2735413..2735522,2736971..2737162,2737347..2737584,2739978..2740072,2741600..2741833,2742900..2743047,2743907..2744054,2745988..2746144,2766071..2766224,2780812..2781090))
location: region:2681448-2781090:-1
so has part: feature:2780812-2781090:-1:exon
so has part: feature:2766071-2766224:-1:exon
so has part: feature:2745988-2746144:-1:exon
so has part: feature:2743907-2744054:-1:exon
so has part: feature:2742900-2743047:-1:exon
so has part: feature:2741600-2741833:-1:exon
so has part: feature:2739978-2740072:-1:exon
so has part: feature:2737347-2737584:-1:exon
so has part: feature:2736971-2737162:-1:exon
so has part: feature:2735413-2735522:-1:exon
so has part: feature:2728130-2728217:-1:exon
so has part: feature:2727385-2727512:-1:exon
so has part: feature:2727085-2727228:-1:exon
so has part: feature:2726299-2726401:-1:exon
so has part: feature:2717055-2717798:-1:exon
so has part: feature:2710316-2710461:-1:exon
so has part: feature:2710076-2710187:-1:exon
so has part: feature:2709171-2709316:-1:exon
so has part: feature:2707586-2707728:-1:exon
so has part: feature:2706577-2706790:-1:exon
so has part: feature:2705182-2705357:-1:exon
so has part: feature:2704205-2704367:-1:exon
so has part: feature:2703025-2703120:-1:exon
so has part: feature:2702199-2702315:-1:exon
so has part: feature:2701045-2701219:-1:exon
so has part: feature:2700276-2700729:-1:exon
so has part: feature:2699772-2699846:-1:exon
so has part: feature:2698860-2699006:-1:exon
so has part: feature:2697345-2697455:-1:exon
so has part: feature:2695702-2695851:-1:exon
so has part: feature:2693782-2695397:-1:exon
so has part: feature:2688735-2688929:-1:exon
so has part: feature:2687409-2687663:-1:exon
so has part: feature:2686277-2686452:-1:exon
so has part: feature:2685188-2685352:-1:exon
so has part: feature:2684689-2684735:-1:exon
so has part: feature:2681448-2681601:-1:exon

XP_030813615.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:2780812-2781090:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2766071-2766224:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2745988-2746144:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2743907-2744054:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2742900-2743047:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2741600-2741833:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2739978-2740072:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2737347-2737584:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2736971-2737162:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2735413-2735522:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:2728130-2728217:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:2727385-2727512:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:2727085-2727228:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:2726299-2726401:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:2717055-2717798:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:2710316-2710461:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:2710076-2710187:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:2709171-2709316:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:2707586-2707728:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:2706577-2706790:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:2705182-2705357:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:2704205-2704367:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:2703025-2703120:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:2702199-2702315:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:2701045-2701219:-1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:2700276-2700729:-1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:2699772-2699846:-1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:2698860-2699006:-1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:2697345-2697455:-1:exon

urn:…
SIO_000300: 30
SIO_000628: feature:2695702-2695851:-1:exon

urn:…
SIO_000300: 31
SIO_000628: feature:2693782-2695397:-1:exon

urn:…
SIO_000300: 32
SIO_000628: feature:2688735-2688929:-1:exon

urn:…
SIO_000300: 33
SIO_000628: feature:2687409-2687663:-1:exon

urn:…
SIO_000300: 34
SIO_000628: feature:2686277-2686452:-1:exon

urn:…
SIO_000300: 35
SIO_000628: feature:2685188-2685352:-1:exon

urn:…
SIO_000300: 36
SIO_000628: feature:2684689-2684735:-1:exon

urn:…
SIO_000300: 37
SIO_000628: feature:2681448-2681601:-1:exon

LOC115908880
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 87175
gene: LOC115908880
product: ankyrin repeat and KH domain-containing protein 1-like, transcript variant X11
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 ESTs, 2 Proteins, and 95% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_030957766.1
SIO_010081: LOC115908880
subclass of: SO_0000673
so part of: LOC115908880
location: complement(join(2731765..2731959,2735413..2735522,2736971..2737162,2737347..2737584,2739978..2740072,2741600..2741833,2742900..2743047,2743907..2744054,2745988..2746144,2766071..2766224,2780812..2781177))
location: region:2731765-2781177:-1
so has part: feature:2780812-2781177:-1:exon
so has part: feature:2766071-2766224:-1:exon
so has part: feature:2745988-2746144:-1:exon
so has part: feature:2743907-2744054:-1:exon
so has part: feature:2742900-2743047:-1:exon
so has part: feature:2741600-2741833:-1:exon
so has part: feature:2739978-2740072:-1:exon
so has part: feature:2737347-2737584:-1:exon
so has part: feature:2736971-2737162:-1:exon
so has part: feature:2735413-2735522:-1:exon
so has part: feature:2731765-2731959:-1:exon

position:2731765:-1
position: 2731765
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2780812-2781177:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2766071-2766224:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2745988-2746144:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2743907-2744054:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2742900-2743047:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2741600-2741833:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2739978-2740072:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2737347-2737584:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2736971-2737162:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2735413-2735522:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:2731765-2731959:-1:exon

position:2731959:-1
position: 2731959
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC115908880
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 87175
gene: LOC115908880
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: ankyrin repeat and KH domain-containing protein 1-like isoform X11
translation: MLTDGTAAAAADEEIDSVAPRAPPAAAEPPAAAGPSPLGLRAVRLFGEAGPGGPGGPGAPAAGEAALDFKLAAAVLRSGGGGGSGSDEDEVSEVESFILDQEDLDNPVLKTTSELFLSSAAEGADLRTVDPETQARLEALLEAAGIGKLSTADGKAFADPEVLRRLTSSVSCALDEAAAALTRMRAENNHNNGQVDNRSLAEACSDGDVNAVRKLLDEGRSVNEHTEEGESLLCLACSAGYYELAQVLLAMHANVEDRGNKGDITPLMAAASGGYVDIVKLLLVHCADVNAQSSTGNTALTYACAGGFVDVVKVLLKAGANIEDHNENGHTPLMEAASAGHVEVARVLLEYGAGINTHSNEFKESALTLACYKGHLDMVRFLLEAGADQEHKTDEMHTALMEACMDGHVEVARLLLDSGAQVNMPADSFESPLTLAACGGHVELAALLIERGANLEEVNDEGYTPLMEAAREGHEEMVALLLAQGANINAQTEETQETALTLACCGGFSEVADFLIKAGADIELGCSTPLMEAAQEGHLELVKYLLAAGANVHATTATGDTALTYACENGHTDVADVLLQAGADLDKQEDFKTILEGIEPGRHQVRLAFDACKLQPQDAC
SIO_010081: LOC115908880
subclass of: SO_0000673
so part of: LOC115908880
location: complement(join(2731852..2731959,2735413..2735522,2736971..2737162,2737347..2737584,2739978..2740072,2741600..2741833,2742900..2743047,2743907..2744054,2745988..2746144,2766071..2766224,2780812..2781090))
location: region:2731852-2781090:-1
so has part: feature:2780812-2781090:-1:exon
so has part: feature:2766071-2766224:-1:exon
so has part: feature:2745988-2746144:-1:exon
so has part: feature:2743907-2744054:-1:exon
so has part: feature:2742900-2743047:-1:exon
so has part: feature:2741600-2741833:-1:exon
so has part: feature:2739978-2740072:-1:exon
so has part: feature:2737347-2737584:-1:exon
so has part: feature:2736971-2737162:-1:exon
so has part: feature:2735413-2735522:-1:exon
so has part: feature:2731852-2731959:-1:exon

XP_030813626.1
type: Protein
SIO_000068: ncbiprotein

position:2731852:-1
position: 2731852
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2780812-2781090:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2766071-2766224:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2745988-2746144:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2743907-2744054:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2742900-2743047:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2741600-2741833:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2739978-2740072:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2737347-2737584:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2736971-2737162:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2735413-2735522:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:2731852-2731959:-1:exon

SLC4A9
type: Gene
subclass of: SO_0000704
RO_0002162: 87175
gene: SLC4A9
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(2781883..2793724)
location: region:2781883-2793724:-1
so has part: feature:2781883-2793724:-1:exon
subclass of: SO_0000010

115908522
type: Gene
SIO_000068: ncbigene

position:2781883:-1
position: 2781883
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2793724:-1
position: 2793724
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2781883-2793724:-1:exon

SLC4A9
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 87175
gene: SLC4A9
product: solute carrier family 4 member 9
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 65 Proteins, and 11% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_030957172.1
SIO_010081: SLC4A9
subclass of: SO_0000673
so part of: SLC4A9
location: complement(join(2781883..2781933,2782050..2782196,2782512..2782685,2783592..2783660,2784568..2784640,2784783..2784961,2785106..2785267,2785889..2786002,2786124..2786306,2786401..2786453,2787138..2787409,2787524..2787657,2787886..2788060,2788240..2788356,2788932..2789086,2789363..2789447,2791063..2791220,2791319..2791380,2791495..2791644,2791854..2792014,2793456..2793724))
location: region:2781883-2793724:-1
so has part: feature:2793456-2793724:-1:exon
so has part: feature:2791854-2792014:-1:exon
so has part: feature:2791495-2791644:-1:exon
so has part: feature:2791319-2791380:-1:exon
so has part: feature:2791063-2791220:-1:exon
so has part: feature:2789363-2789447:-1:exon
so has part: feature:2788932-2789086:-1:exon
so has part: feature:2788240-2788356:-1:exon
so has part: feature:2787886-2788060:-1:exon
so has part: feature:2787524-2787657:-1:exon
so has part: feature:2787138-2787409:-1:exon
so has part: feature:2786401-2786453:-1:exon
so has part: feature:2786124-2786306:-1:exon
so has part: feature:2785889-2786002:-1:exon
so has part: feature:2785106-2785267:-1:exon
so has part: feature:2784783-2784961:-1:exon
so has part: feature:2784568-2784640:-1:exon
so has part: feature:2783592-2783660:-1:exon
so has part: feature:2782512-2782685:-1:exon
so has part: feature:2782050-2782196:-1:exon
so has part: feature:2781883-2781933:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2793456-2793724:-1:exon

position:2793456:-1
position: 2793456
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2791854-2792014:-1:exon

position:2791854:-1
position: 2791854
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2792014:-1
position: 2792014
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2791495-2791644:-1:exon

position:2791495:-1
position: 2791495
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2791644:-1
position: 2791644
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:2791319-2791380:-1:exon

position:2791319:-1
position: 2791319
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2791380:-1
position: 2791380
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:2791063-2791220:-1:exon

position:2791063:-1
position: 2791063
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2791220:-1
position: 2791220
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:2789363-2789447:-1:exon

position:2789363:-1
position: 2789363
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2789447:-1
position: 2789447
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:2788932-2789086:-1:exon

position:2788932:-1
position: 2788932
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2789086:-1
position: 2789086
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:2788240-2788356:-1:exon

position:2788240:-1
position: 2788240
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2788356:-1
position: 2788356
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:2787886-2788060:-1:exon

position:2787886:-1
position: 2787886
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2788060:-1
position: 2788060
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:2787524-2787657:-1:exon

position:2787524:-1
position: 2787524
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2787657:-1
position: 2787657
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:2787138-2787409:-1:exon

position:2787138:-1
position: 2787138
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2787409:-1
position: 2787409
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:2786401-2786453:-1:exon

position:2786401:-1
position: 2786401
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2786453:-1
position: 2786453
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:2786124-2786306:-1:exon

position:2786124:-1
position: 2786124
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2786306:-1
position: 2786306
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:2785889-2786002:-1:exon

position:2785889:-1
position: 2785889
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2786002:-1
position: 2786002
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:2785106-2785267:-1:exon

position:2785106:-1
position: 2785106
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2785267:-1
position: 2785267
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:2784783-2784961:-1:exon

position:2784783:-1
position: 2784783
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2784961:-1
position: 2784961
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:2784568-2784640:-1:exon

position:2784568:-1
position: 2784568
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2784640:-1
position: 2784640
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:2783592-2783660:-1:exon

position:2783592:-1
position: 2783592
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2783660:-1
position: 2783660
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:2782512-2782685:-1:exon

position:2782512:-1
position: 2782512
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2782685:-1
position: 2782685
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:2782050-2782196:-1:exon

position:2782050:-1
position: 2782050
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2782196:-1
position: 2782196
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:2781883-2781933:-1:exon

position:2781933:-1
position: 2781933
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

SLC4A9
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 87175
gene: SLC4A9
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: anion exchange protein 4
translation: MRAHMPAAGGPALRAADSDSQPRLECSNSGAPSQAFGCSIFPSSTATAARRAGAALQWEERGDVTCPLLFIQLNQLLSTPAGPEWREMARWIKFEEKVEDGGERWSAPHVPALPLHSLFQLRTCLQKGTMLLDLDATSFKEIIDKALSEQPEEAELQPALRERLAALLLLQPQHQPTKSLLQLLAELGLSPCRGKAKGRSEPRTQVSKTPLKEQLRNRFKKKVPPGAQAAHVAVGEVEFLEKPFTAFIRLRHGVSLGSLAEVSLPSRFLFILLGPPRVKAYHEVGRAMATLLTDELFQRVARQAEHREDLMAGIEAFLDELVVLPPGKWDPGARIPPPSHLPAPRRRTAVDPVDQQPHGNGDKTTAGDRASPGHPRSGEELQRTGRLFGGLLRDIRRKAPWYGSDFSDALHPQCLSAVLYIYLATVTNAITFGGMLGDATANMQGVLESFLGTAFAGFIFCLFSGQPLTILSSTGPVLVFERLLFSFSQDHSLDYLEFRLWIGLWVAFFGVVLVATEASHLVGHFTRFTEEGFCALISLIFIYDSLKKMLSLADAFPINWHYRLDNVTSYSCTCNLSSPGHSSAGNDTSLPSPLAWQPPPTPAGLSRTQCLDQGGHLLGTSCQYVPDVTLVSFLLFGGTFLFCTALKRFRSSRYFPVGVRKLVSDFAVILAILASCAVDALLGLETPKLLVPSELKPTNPARGWVVFPFGANPWWVCLLSAVPAVLVTILIFMDQQITAVILNRREYKLQKGAGFHLDLLCVSLLMVVTSVTGLPWYVSATVISLAHMDSLRKESATSAPGEHPEFLGIREQRLTGLAVFILMGVSVFMAPVLKHIPMPVLYGVFLHMGVTALNSIQLTDRVRLLLMPAKHQPDLAYLRHVPLRRVHLFTTIQLLCLALLWLLKSTVAAIIFPVMLLALVGIRKGLERIFSRHDLSWLDGPLPAPGAAGTQPRERPEQGGAAEECEPMQRPGAQINLSVN
SIO_010081: SLC4A9
subclass of: SO_0000673
so part of: SLC4A9
location: complement(join(2781883..2781933,2782050..2782196,2782512..2782685,2783592..2783660,2784568..2784640,2784783..2784961,2785106..2785267,2785889..2786002,2786124..2786306,2786401..2786453,2787138..2787409,2787524..2787657,2787886..2788060,2788240..2788356,2788932..2789086,2789363..2789447,2791063..2791220,2791319..2791380,2791495..2791644,2791854..2792014,2793456..2793724))
location: region:2781883-2793724:-1
so has part: feature:2793456-2793724:-1:exon
so has part: feature:2791854-2792014:-1:exon
so has part: feature:2791495-2791644:-1:exon
so has part: feature:2791319-2791380:-1:exon
so has part: feature:2791063-2791220:-1:exon
so has part: feature:2789363-2789447:-1:exon
so has part: feature:2788932-2789086:-1:exon
so has part: feature:2788240-2788356:-1:exon
so has part: feature:2787886-2788060:-1:exon
so has part: feature:2787524-2787657:-1:exon
so has part: feature:2787138-2787409:-1:exon
so has part: feature:2786401-2786453:-1:exon
so has part: feature:2786124-2786306:-1:exon
so has part: feature:2785889-2786002:-1:exon
so has part: feature:2785106-2785267:-1:exon
so has part: feature:2784783-2784961:-1:exon
so has part: feature:2784568-2784640:-1:exon
so has part: feature:2783592-2783660:-1:exon
so has part: feature:2782512-2782685:-1:exon
so has part: feature:2782050-2782196:-1:exon
so has part: feature:2781883-2781933:-1:exon

XP_030813032.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:2793456-2793724:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2791854-2792014:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2791495-2791644:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2791319-2791380:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2791063-2791220:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2789363-2789447:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2788932-2789086:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2788240-2788356:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2787886-2788060:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2787524-2787657:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:2787138-2787409:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:2786401-2786453:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:2786124-2786306:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:2785889-2786002:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:2785106-2785267:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:2784783-2784961:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:2784568-2784640:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:2783592-2783660:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:2782512-2782685:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:2782050-2782196:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:2781883-2781933:-1:exon

HBEGF
type: Gene
subclass of: SO_0000704
RO_0002162: 87175
gene: HBEGF
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 2796399..2802780
location: region:2796399-2802780:1
so has part: feature:2796399-2802780:1:exon
subclass of: SO_0000010

115908769
type: Gene
SIO_000068: ncbigene

position:2796399:1
position: 2796399
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2802780:1
position: 2802780
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2796399-2802780:1:exon

HBEGF
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 87175
gene: HBEGF
product: heparin binding EGF like growth factor
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, 4 Proteins, and 91% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_030957608.1
SIO_010081: HBEGF
subclass of: SO_0000673
so part of: HBEGF
location: join(2796399..2796490,2796694..2796873,2798800..2798977,2800859..2801014,2801128..2801220,2802313..2802780)
location: region:2796399-2802780:1
so has part: feature:2796399-2796490:1:exon
so has part: feature:2796694-2796873:1:exon
so has part: feature:2798800-2798977:1:exon
so has part: feature:2800859-2801014:1:exon
so has part: feature:2801128-2801220:1:exon
so has part: feature:2802313-2802780:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2796399-2796490:1:exon

position:2796490:1
position: 2796490
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2796694-2796873:1:exon

position:2796694:1
position: 2796694
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2796873:1
position: 2796873
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2798800-2798977:1:exon

position:2798800:1
position: 2798800
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2798977:1
position: 2798977
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:2800859-2801014:1:exon

position:2800859:1
position: 2800859
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2801014:1
position: 2801014
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:2801128-2801220:1:exon

position:2801128:1
position: 2801128
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2801220:1
position: 2801220
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:2802313-2802780:1:exon

position:2802313:1
position: 2802313
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

HBEGF
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 87175
gene: HBEGF
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: proheparin-binding EGF-like growth factor
translation: MDGRAVLIQALLAAVCSAAAGGLRRDELHNEVLHKGGGGGGGVPVAATAPLLGGSPEKEGGGAASGDDFSELPRVAFLSKPQGLVTPKKKGNGNKRRKGKGLGKKRDPCLRKYKDFCIHGECKYIRELGAPSCICQPGYHGERCHGLLLPVEHPPSTYDHTTALAVVAVVLSSLCLVIIAALLMLRCHKRGGYDVENEEKIKLGITVNH
SIO_010081: HBEGF
subclass of: SO_0000673
so part of: HBEGF
location: join(2796448..2796490,2796694..2796873,2798800..2798977,2800859..2801014,2801128..2801200)
location: region:2796448-2801200:1
so has part: feature:2796448-2796490:1:exon
so has part: feature:2796694-2796873:1:exon
so has part: feature:2798800-2798977:1:exon
so has part: feature:2800859-2801014:1:exon
so has part: feature:2801128-2801200:1:exon

XP_030813468.1
type: Protein
SIO_000068: ncbiprotein

position:2796448:1
position: 2796448
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2801200:1
position: 2801200
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2796448-2796490:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2796694-2796873:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2798800-2798977:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2800859-2801014:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2801128-2801200:1:exon

PFDN1
type: Gene
subclass of: SO_0000704
RO_0002162: 87175
gene: PFDN1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 2804639..2835906
location: region:2804639-2835906:1
so has part: feature:2804639-2835906:1:exon
subclass of: SO_0000010

115908601
type: Gene
SIO_000068: ncbigene

position:2804639:1
position: 2804639
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2835906:1
position: 2835906
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2804639-2835906:1:exon

PFDN1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 87175
gene: PFDN1
product: prefoldin subunit 1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 mRNAs, 7 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
transcript id: XM_030957322.1
SIO_010081: PFDN1
subclass of: SO_0000673
so part of: PFDN1
location: join(2804639..2804699,2804894..2805060,2820030..2820114,2835767..2835906)
location: region:2804639-2835906:1
so has part: feature:2804639-2804699:1:exon
so has part: feature:2804894-2805060:1:exon
so has part: feature:2820030-2820114:1:exon
so has part: feature:2835767-2835906:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2804639-2804699:1:exon

position:2804699:1
position: 2804699
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2804894-2805060:1:exon

position:2804894:1
position: 2804894
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2805060:1
position: 2805060
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2820030-2820114:1:exon

position:2820030:1
position: 2820030
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2820114:1
position: 2820114
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:2835767-2835906:1:exon

position:2835767:1
position: 2835767
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

PFDN1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 87175
gene: PFDN1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: prefoldin subunit 1
translation: MAAPVDLELKKAFTELQAKVMDTQQKVKLADLQIEQLTKTKKHAHLTDTEVMMLVDETRMYEGVGRMFILQPKGVIHNQLLEKQRIAEEKIKELEQKKSYLERSVKEAEDNIREMLMARRAQ
SIO_010081: PFDN1
subclass of: SO_0000673
so part of: PFDN1
location: join(2804667..2804699,2804894..2805060,2820030..2820114,2835767..2835850)
location: region:2804667-2835850:1
so has part: feature:2804667-2804699:1:exon
so has part: feature:2804894-2805060:1:exon
so has part: feature:2820030-2820114:1:exon
so has part: feature:2835767-2835850:1:exon

XP_030813182.1
type: Protein
SIO_000068: ncbiprotein

position:2804667:1
position: 2804667
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2835850:1
position: 2835850
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2804667-2804699:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2804894-2805060:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2820030-2820114:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2835767-2835850:1:exon

CYSTM1
type: Gene
subclass of: SO_0000704
RO_0002162: 87175
gene: CYSTM1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(2837485..2861439)
location: region:2837485-2861439:-1
so has part: feature:2837485-2861439:-1:exon
subclass of: SO_0000010

115908571
type: Gene
SIO_000068: ncbigene

position:2837485:-1
position: 2837485
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2861439:-1
position: 2861439
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2837485-2861439:-1:exon

CYSTM1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 87175
gene: CYSTM1
product: cysteine rich transmembrane module containing 1, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 56 ESTs, 3 Proteins, and 93% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
transcript id: XM_030957268.1
SIO_010081: CYSTM1
subclass of: SO_0000673
so part of: CYSTM1
location: complement(join(2837485..2837985,2849579..2849820,2861334..2861439))
location: region:2837485-2861439:-1
so has part: feature:2861334-2861439:-1:exon
so has part: feature:2849579-2849820:-1:exon
so has part: feature:2837485-2837985:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2861334-2861439:-1:exon

position:2861334:-1
position: 2861334
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2849579-2849820:-1:exon

position:2849579:-1
position: 2849579
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2849820:-1
position: 2849820
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2837485-2837985:-1:exon

position:2837985:-1
position: 2837985
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

CYSTM1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 87175
gene: CYSTM1
product: cysteine rich transmembrane module containing 1, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 56 ESTs, 3 Proteins, and 93% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_030957269.1
SIO_010081: CYSTM1
subclass of: SO_0000673
so part of: CYSTM1
location: complement(join(2837485..2837985,2849579..2849820,2861368..2861394))
location: region:2837485-2861394:-1
so has part: feature:2861368-2861394:-1:exon
so has part: feature:2849579-2849820:-1:exon
so has part: feature:2837485-2837985:-1:exon

position:2861394:-1
position: 2861394
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2861368-2861394:-1:exon

position:2861368:-1
position: 2861368
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2849579-2849820:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2837485-2837985:-1:exon

CYSTM1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 87175
gene: CYSTM1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: cysteine-rich and transmembrane domain-containing protein 1
translation: MSYDNPPPYPGPGPTAPYPPYAQQPGAPPGPYPGYPPGPYQPGQPGYQGYPQYGWQNAPPPPPGPVYADGPKNTVYVVEERRRDDTGESACLTACWTALCCCCLWDMLT
SIO_010081: CYSTM1
subclass of: SO_0000673
so part of: CYSTM1
location: complement(join(2837879..2837985,2849579..2849801))
location: region:2837879-2849801:-1
so has part: feature:2849579-2849801:-1:exon
so has part: feature:2837879-2837985:-1:exon

XP_030813128.1
type: Protein
SIO_000068: ncbiprotein

position:2837879:-1
position: 2837879
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2849801:-1
position: 2849801
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2849579-2849801:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2837879-2837985:-1:exon

CYSTM1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 87175
gene: CYSTM1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: cysteine-rich and transmembrane domain-containing protein 1
translation: MSYDNPPPYPGPGPTAPYPPYAQQPGAPPGPYPGYPPGPYQPGQPGYQGYPQYGWQNAPPPPPGPVYADGPKNTVYVVEERRRDDTGESACLTACWTALCCCCLWDMLT
SIO_010081: CYSTM1
subclass of: SO_0000673
so part of: CYSTM1
location: complement(join(2837879..2837985,2849579..2849801))
location: region:2837879-2849801:-1
so has part: feature:2849579-2849801:-1:exon
so has part: feature:2837879-2837985:-1:exon

XP_030813129.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:2849579-2849801:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2837879-2837985:-1:exon

LOC115908636
type: Gene
subclass of: SO_0000704
RO_0002162: 87175
gene: LOC115908636
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(2881848..2901031)
location: region:2881848-2901031:-1
so has part: feature:2881848-2901031:-1:exon
subclass of: SO_0000011

115908636
type: Gene
SIO_000068: ncbigene

position:2881848:-1
position: 2881848
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2901031:-1
position: 2901031
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2881848-2901031:-1:exon

LOC115908636
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 87175
nc RNA class: lncRNA
gene: LOC115908636
product: uncharacterized LOC115908636, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 10 ESTs, and 99% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XR_004061125.1
SIO_010081: LOC115908636
subclass of: SO_0000673
so part of: LOC115908636
location: complement(join(2881848..2884992,2900948..2901031))
location: region:2881848-2901031:-1
so has part: feature:2900948-2901031:-1:exon
so has part: feature:2881848-2884992:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2900948-2901031:-1:exon

position:2900948:-1
position: 2900948
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2881848-2884992:-1:exon

position:2884992:-1
position: 2884992
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC115908636
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 87175
nc RNA class: lncRNA
gene: LOC115908636
product: uncharacterized LOC115908636, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 ESTs, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XR_004061126.1
SIO_010081: LOC115908636
subclass of: SO_0000673
so part of: LOC115908636
location: complement(join(2881872..2882412,2883515..2884992,2900948..2901031))
location: region:2881872-2901031:-1
so has part: feature:2900948-2901031:-1:exon
so has part: feature:2883515-2884992:-1:exon
so has part: feature:2881872-2882412:-1:exon

position:2881872:-1
position: 2881872
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2900948-2901031:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2883515-2884992:-1:exon

position:2883515:-1
position: 2883515
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2881872-2882412:-1:exon

position:2882412:-1
position: 2882412
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

PURA
type: Gene
subclass of: SO_0000704
RO_0002162: 87175
gene: PURA
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(<2901198..2902106)
location: region:2901198-2902106:-1
so has part: feature:2901198-2902106:-1:exon
subclass of: SO_0000010

115908840
type: Gene
SIO_000068: ncbigene

position:2901198:-1
position: 2901198
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition

position:2902106:-1
position: 2902106
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2901198-2902106:-1:exon

PURA
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 87175
gene: PURA
product: purine rich element binding protein A
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, 17 Proteins, and 86% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_030957700.1
SIO_010081: PURA
subclass of: SO_0000673
so part of: PURA
location: complement(<2901198..2902106)
location: region:2901198-2902106:-1
so has part: feature:2901198-2902106:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2901198-2902106:-1:exon

PURA
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 87175
gene: PURA
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: transcriptional activator protein Pur-alpha
translation: MADRDSGSEQGGGGGGAAGAGGPGAGGGGPGGGGGGGGGPGGGLQHETQELASKRVDIQNKRFYLDVKQNAKGRFLKIAEVGAGGNKSRLTLSMSVAVEFRDYLGDFIEHYAQLGPSQPPELAQAADEPRRALKSEFLVRENRKYYMDLKENQRGRFLRVRQTVNRGPGLGSTQGQTIALPAQGLIEFRDALAKLIDDYGVEEEPAELPEGTSLTVDNKRFFFDVGSNKYGVFMRVSEVKPTYRNSITVPYKVWAKFGHTFCKYSDEMKKIQEKQRDKRAAAAAAPAVGAEPPPRPRRPPPAA
SIO_010081: PURA
subclass of: SO_0000673
so part of: PURA
location: complement(<2901198..2902106)
location: region:2901198-2902106:-1
so has part: feature:2901198-2902106:-1:exon

XP_030813560.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:2901198-2902106:-1:exon

NRG2
type: Gene
subclass of: SO_0000704
RO_0002162: 87175
gene: NRG2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 2920874..3079743
location: region:2920874-3079743:1
so has part: feature:2920874-3079743:1:exon
subclass of: SO_0000010

115908656
type: Gene
SIO_000068: ncbigene

position:2920874:1
position: 2920874
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3079743:1
position: 3079743
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2920874-3079743:1:exon

NRG2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 87175
gene: NRG2
product: neuregulin 2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 8 Proteins, and 70% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_030957411.1
SIO_010081: NRG2
subclass of: SO_0000673
so part of: NRG2
location: join(2920874..2921300,3022354..3022525,3035441..3035559,3039208..3039273,3049494..3049614,3059041..3059099,3067132..3067155,3071522..3071624,3072501..3072624,3073896..3074023,3076849..3077073,3079086..3079743)
location: region:2920874-3079743:1
so has part: feature:2920874-2921300:1:exon
so has part: feature:3022354-3022525:1:exon
so has part: feature:3035441-3035559:1:exon
so has part: feature:3039208-3039273:1:exon
so has part: feature:3049494-3049614:1:exon
so has part: feature:3059041-3059099:1:exon
so has part: feature:3067132-3067155:1:exon
so has part: feature:3071522-3071624:1:exon
so has part: feature:3072501-3072624:1:exon
so has part: feature:3073896-3074023:1:exon
so has part: feature:3076849-3077073:1:exon
so has part: feature:3079086-3079743:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2920874-2921300:1:exon

position:2921300:1
position: 2921300
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:3022354-3022525:1:exon

position:3022354:1
position: 3022354
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3022525:1
position: 3022525
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:3035441-3035559:1:exon

position:3035441:1
position: 3035441
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3035559:1
position: 3035559
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:3039208-3039273:1:exon

position:3039208:1
position: 3039208
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3039273:1
position: 3039273
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:3049494-3049614:1:exon

position:3049494:1
position: 3049494
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3049614:1
position: 3049614
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:3059041-3059099:1:exon

position:3059041:1
position: 3059041
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3059099:1
position: 3059099
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:3067132-3067155:1:exon

position:3067132:1
position: 3067132
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3067155:1
position: 3067155
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:3071522-3071624:1:exon

position:3071522:1
position: 3071522
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3071624:1
position: 3071624
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:3072501-3072624:1:exon

position:3072501:1
position: 3072501
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3072624:1
position: 3072624
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:3073896-3074023:1:exon

position:3073896:1
position: 3073896
reference: sequence
type: ForwardStrandPosition
type: ExactPosition