Camarhynchus parvulus chromosome 11, STF_HiC, whole genome shotgun sequence.
type: Entry
definition: Camarhynchus parvulus chromosome 11, STF_HiC, whole genome shotgun sequence.
sequence version: NC_044581.1
sequence date: 2019-09-26
sequence: sequence
division: CON
label: NC_044581.1
type: RefSeq
SIO_000068: refseq
dblink: PRJNA566393
dblink: SAMEA5603054
keyword: WGS
keyword: RefSeq
source: Camarhynchus parvulus
organism: Camarhynchus parvulus
taxonomy: Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Passeriformes; Thraupidae; Camarhynchus.
comment: REFSEQ INFORMATION: The reference sequence is identical to\nLR595706.1.\nAssembly name: STF_HiC\nThe genomic sequence for this RefSeq record is from the\nwhole-genome assembly released by the UPPSALA UNIVERISTY on\n2019/09/06. The original whole-genome shotgun project has the\naccession CABFNF000000000.1.\n\n##Genome-Annotation-Data-START##\nAnnotation Provider :: NCBI\nAnnotation Status :: Full annotation\nAnnotation Name :: Camarhynchus parvulus Annotation\n Release 100\nAnnotation Version :: 100\nAnnotation Pipeline :: NCBI eukaryotic genome annotation\n pipeline\nAnnotation Software Version :: 8.2\nAnnotation Method :: Best-placed RefSeq; Gnomon\nFeatures Annotated :: Gene; mRNA; CDS; ncRNA\n##Genome-Annotation-Data-END##

sequence
subclass of: SO_0000340
sequence length: 20750786
topology: linear
so has quality: SO_0000987
location: 1..20750786
location: region:1-20750786:1
RO_0002162: 87175

NC_044581
type: RefSeq
SIO_000068: refseq

PRJNA566393
type: BioProject
SIO_000068: bioproject

SAMEA5603054
type: BioSample
SIO_000068: biosample

position:1:1
position: 1
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:20750786:1
position: 20750786
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

feature:1-20750786:1:source
so part of: sequence
organism: Camarhynchus parvulus
mol type: genomic DNA
chromosome: 11

87175
type: Taxonomy
SIO_000068: taxonomy

LOC115908002
type: Gene
subclass of: SO_0000704
RO_0002162: 87175
gene: LOC115908002
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(25..8534)
location: region:25-8534:-1
so has part: feature:25-8534:-1:exon
subclass of: SO_0000010

115908002
type: Gene
SIO_000068: ncbigene

position:25:-1
position: 25
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:8534:-1
position: 8534
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:25-8534:-1:exon

LOC115908002
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 87175
gene: LOC115908002
product: carbohydrate sulfotransferase 5-like, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 9 ESTs, 12 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XM_030956276.1
SIO_010081: LOC115908002
subclass of: SO_0000673
so part of: LOC115908002
location: complement(join(25..1864,7767..7916,8385..8534))
location: region:25-8534:-1
so has part: feature:8385-8534:-1:exon
so has part: feature:7767-7916:-1:exon
so has part: feature:25-1864:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:8385-8534:-1:exon

position:8385:-1
position: 8385
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:7767-7916:-1:exon

position:7767:-1
position: 7767
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7916:-1
position: 7916
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:25-1864:-1:exon

position:1864:-1
position: 1864
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC115908002
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 87175
gene: LOC115908002
product: carbohydrate sulfotransferase 5-like, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 9 ESTs, 12 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_030956278.1
SIO_010081: LOC115908002
subclass of: SO_0000673
so part of: LOC115908002
location: complement(join(25..1864,7767..7916,8190..8368))
location: region:25-8368:-1
so has part: feature:8190-8368:-1:exon
so has part: feature:7767-7916:-1:exon
so has part: feature:25-1864:-1:exon

position:8368:-1
position: 8368
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:8190-8368:-1:exon

position:8190:-1
position: 8190
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:7767-7916:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:25-1864:-1:exon

LOC115908002
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 87175
gene: LOC115908002
product: carbohydrate sulfotransferase 5-like, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 9 ESTs, 12 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_030956277.1
SIO_010081: LOC115908002
subclass of: SO_0000673
so part of: LOC115908002
location: complement(join(25..1864,7767..7916,8156..8368))
location: region:25-8368:-1
so has part: feature:8156-8368:-1:exon
so has part: feature:7767-7916:-1:exon
so has part: feature:25-1864:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:8156-8368:-1:exon

position:8156:-1
position: 8156
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:7767-7916:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:25-1864:-1:exon

LOC115908002
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 87175
gene: LOC115908002
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: carbohydrate sulfotransferase 5-like
translation: MARIRIPSTIVIIFVTVQTGFLLFMYARYSSFMPQSEEKPSQVHILILSSWRSGSSFVGQLFSQHPNVFYLMEPAWHVWVTMYQNSAKVLHMAVRDLVRSVFLCDMSVFDAYMPWKRNLSDLFQWAASRALCSAPACDSFQRTDITSELACKTLCGRYPFSKVEEACKTYSHVVIKEVRFFDLKVLYPLLTDPSLNLKIIHLVRDPRAVVKSREQSVKALARDNGIVLSTNGTKVEDSKYKVMQEVCRSHVQVYETAALKPPNFLKDRYLMVRFEDLVRDPLSEISEMYKFADLSLTPRLKSWVYNITHGQGPGKKKEAFKITSRDAVSVSQAWRNVLSFEKVKKIQEVCKGAINILGYQLVDSEKEQRDLTLDLVLPRRHNQFSWSSFNPKH
SIO_010081: LOC115908002
subclass of: SO_0000673
so part of: LOC115908002
location: complement(655..1836)
location: region:655-1836:-1
so has part: feature:655-1836:-1:exon

XP_030812136.1
type: Protein
SIO_000068: ncbiprotein

position:655:-1
position: 655
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1836:-1
position: 1836
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:655-1836:-1:exon

LOC115908002
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 87175
gene: LOC115908002
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: carbohydrate sulfotransferase 5-like
translation: MARIRIPSTIVIIFVTVQTGFLLFMYARYSSFMPQSEEKPSQVHILILSSWRSGSSFVGQLFSQHPNVFYLMEPAWHVWVTMYQNSAKVLHMAVRDLVRSVFLCDMSVFDAYMPWKRNLSDLFQWAASRALCSAPACDSFQRTDITSELACKTLCGRYPFSKVEEACKTYSHVVIKEVRFFDLKVLYPLLTDPSLNLKIIHLVRDPRAVVKSREQSVKALARDNGIVLSTNGTKVEDSKYKVMQEVCRSHVQVYETAALKPPNFLKDRYLMVRFEDLVRDPLSEISEMYKFADLSLTPRLKSWVYNITHGQGPGKKKEAFKITSRDAVSVSQAWRNVLSFEKVKKIQEVCKGAINILGYQLVDSEKEQRDLTLDLVLPRRHNQFSWSSFNPKH
SIO_010081: LOC115908002
subclass of: SO_0000673
so part of: LOC115908002
location: complement(655..1836)
location: region:655-1836:-1
so has part: feature:655-1836:-1:exon

XP_030812137.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:655-1836:-1:exon

LOC115908002
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 87175
gene: LOC115908002
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: carbohydrate sulfotransferase 5-like
translation: MARIRIPSTIVIIFVTVQTGFLLFMYARYSSFMPQSEEKPSQVHILILSSWRSGSSFVGQLFSQHPNVFYLMEPAWHVWVTMYQNSAKVLHMAVRDLVRSVFLCDMSVFDAYMPWKRNLSDLFQWAASRALCSAPACDSFQRTDITSELACKTLCGRYPFSKVEEACKTYSHVVIKEVRFFDLKVLYPLLTDPSLNLKIIHLVRDPRAVVKSREQSVKALARDNGIVLSTNGTKVEDSKYKVMQEVCRSHVQVYETAALKPPNFLKDRYLMVRFEDLVRDPLSEISEMYKFADLSLTPRLKSWVYNITHGQGPGKKKEAFKITSRDAVSVSQAWRNVLSFEKVKKIQEVCKGAINILGYQLVDSEKEQRDLTLDLVLPRRHNQFSWSSFNPKH
SIO_010081: LOC115908002
subclass of: SO_0000673
so part of: LOC115908002
location: complement(655..1836)
location: region:655-1836:-1
so has part: feature:655-1836:-1:exon

XP_030812138.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:655-1836:-1:exon

TMEM231
type: Gene
subclass of: SO_0000704
RO_0002162: 87175
gene: TMEM231
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(11219..16701)
location: region:11219-16701:-1
so has part: feature:11219-16701:-1:exon
subclass of: SO_0000010

115908004
type: Gene
SIO_000068: ncbigene

position:11219:-1
position: 11219
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:16701:-1
position: 16701
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:11219-16701:-1:exon

TMEM231
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 87175
gene: TMEM231
product: transmembrane protein 231
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 ESTs, 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XM_030956281.1
SIO_010081: TMEM231
subclass of: SO_0000673
so part of: TMEM231
location: complement(join(11219..11714,12605..12710,12838..12919,13221..13364,14722..14850,15868..16037,16114..16701))
location: region:11219-16701:-1
so has part: feature:16114-16701:-1:exon
so has part: feature:15868-16037:-1:exon
so has part: feature:14722-14850:-1:exon
so has part: feature:13221-13364:-1:exon
so has part: feature:12838-12919:-1:exon
so has part: feature:12605-12710:-1:exon
so has part: feature:11219-11714:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:16114-16701:-1:exon

position:16114:-1
position: 16114
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:15868-16037:-1:exon

position:15868:-1
position: 15868
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:16037:-1
position: 16037
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:14722-14850:-1:exon

position:14722:-1
position: 14722
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:14850:-1
position: 14850
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:13221-13364:-1:exon

position:13221:-1
position: 13221
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:13364:-1
position: 13364
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:12838-12919:-1:exon

position:12838:-1
position: 12838
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:12919:-1
position: 12919
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:12605-12710:-1:exon

position:12605:-1
position: 12605
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:12710:-1
position: 12710
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:11219-11714:-1:exon

position:11714:-1
position: 11714
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

TMEM231
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 87175
gene: TMEM231
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: transmembrane protein 231
translation: MASVELYSHPALYTRYRAGFCSAAALALLLITALTYVPPLLVAYRSHGFWLKQSAYLEQPTVRFRYEALFVATIGSSPGSFLAWSTFPAFNRLQEDRLRVPLLSTREEDKNQDGKMDQLHFKLELPLQPTEHVVGVQLILLFSYQLYRMSTFVMQSMAFLQFFSPVPGSQLYVNGDLKLNQRQLLNHCGLDTRYNVSVVNGTSPFASDYDLANIIAAYWDRNVTTVFSDPSPVWMAGRATDTPFIINATIHYPVEVILYQPGFWEIIKFAWIQYVSILLIFLWVFGRIKTFLFQNQVLTTIPVSAVLPVSPVLSYKQHQS
SIO_010081: TMEM231
subclass of: SO_0000673
so part of: TMEM231
location: complement(join(11525..11714,12605..12710,12838..12919,13221..13364,14722..14850,15868..16037,16114..16255))
location: region:11525-16255:-1
so has part: feature:16114-16255:-1:exon
so has part: feature:15868-16037:-1:exon
so has part: feature:14722-14850:-1:exon
so has part: feature:13221-13364:-1:exon
so has part: feature:12838-12919:-1:exon
so has part: feature:12605-12710:-1:exon
so has part: feature:11525-11714:-1:exon

XP_030812141.1
type: Protein
SIO_000068: ncbiprotein

position:11525:-1
position: 11525
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:16255:-1
position: 16255
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:16114-16255:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:15868-16037:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:14722-14850:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:13221-13364:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:12838-12919:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:12605-12710:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:11525-11714:-1:exon

GABARAPL2
type: Gene
subclass of: SO_0000704
RO_0002162: 87175
gene: GABARAPL2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 16418..21428
location: region:16418-21428:1
so has part: feature:16418-21428:1:exon
subclass of: SO_0000010

115908005
type: Gene
SIO_000068: ncbigene

position:16418:1
position: 16418
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:21428:1
position: 21428
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:16418-21428:1:exon

GABARAPL2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 87175
gene: GABARAPL2
product: GABA type A receptor associated protein like 2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 13 mRNAs, 46 ESTs, 22 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
transcript id: XM_030956282.1
SIO_010081: GABARAPL2
subclass of: SO_0000673
so part of: GABARAPL2
location: join(16418..16807,17118..17173,19112..19284,20850..21428)
location: region:16418-21428:1
so has part: feature:16418-16807:1:exon
so has part: feature:17118-17173:1:exon
so has part: feature:19112-19284:1:exon
so has part: feature:20850-21428:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:16418-16807:1:exon

position:16807:1
position: 16807
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:17118-17173:1:exon

position:17118:1
position: 17118
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:17173:1
position: 17173
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:19112-19284:1:exon

position:19112:1
position: 19112
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:19284:1
position: 19284
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:20850-21428:1:exon

position:20850:1
position: 20850
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

GABARAPL2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 87175
gene: GABARAPL2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: gamma-aminobutyric acid receptor-associated protein-like 2
translation: MKWMFKEDHALEHRCVESAKIRAKYPDRVPVIVEKVSGSQIVDIDKRKYLVPSDITVAQFMWIIRKRIQLPSEKAIFLFVDKTVPQSSLTMGQLYEKEKDEDGFLYVAYSGENTFGF
SIO_010081: GABARAPL2
subclass of: SO_0000673
so part of: GABARAPL2
location: join(16774..16807,17118..17173,19112..19284,20850..20940)
location: region:16774-20940:1
so has part: feature:16774-16807:1:exon
so has part: feature:17118-17173:1:exon
so has part: feature:19112-19284:1:exon
so has part: feature:20850-20940:1:exon

XP_030812142.1
type: Protein
SIO_000068: ncbiprotein

position:16774:1
position: 16774
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:20940:1
position: 20940
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:16774-16807:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:17118-17173:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:19112-19284:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:20850-20940:1:exon

ADAT1
type: Gene
subclass of: SO_0000704
RO_0002162: 87175
gene: ADAT1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(21238..45913)
location: region:21238-45913:-1
so has part: feature:21238-45913:-1:exon
subclass of: SO_0000010

115908000
type: Gene
SIO_000068: ncbigene

position:21238:-1
position: 21238
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:45913:-1
position: 45913
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:21238-45913:-1:exon

ADAT1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 87175
gene: ADAT1
product: adenosine deaminase tRNA specific 1, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 4 ESTs, 7 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XM_030956273.1
SIO_010081: ADAT1
subclass of: SO_0000673
so part of: ADAT1
location: complement(join(21238..26546,31142..31228,34545..34644,36863..37008,39478..40090,41626..41753,42520..42574,44257..44325,45092..45285,45732..45850))
location: region:21238-45850:-1
so has part: feature:45732-45850:-1:exon
so has part: feature:45092-45285:-1:exon
so has part: feature:44257-44325:-1:exon
so has part: feature:42520-42574:-1:exon
so has part: feature:41626-41753:-1:exon
so has part: feature:39478-40090:-1:exon
so has part: feature:36863-37008:-1:exon
so has part: feature:34545-34644:-1:exon
so has part: feature:31142-31228:-1:exon
so has part: feature:21238-26546:-1:exon

position:45850:-1
position: 45850
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:45732-45850:-1:exon

position:45732:-1
position: 45732
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:45092-45285:-1:exon

position:45092:-1
position: 45092
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:45285:-1
position: 45285
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:44257-44325:-1:exon

position:44257:-1
position: 44257
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:44325:-1
position: 44325
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:42520-42574:-1:exon

position:42520:-1
position: 42520
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:42574:-1
position: 42574
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:41626-41753:-1:exon

position:41626:-1
position: 41626
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:41753:-1
position: 41753
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:39478-40090:-1:exon

position:39478:-1
position: 39478
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:40090:-1
position: 40090
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:36863-37008:-1:exon

position:36863:-1
position: 36863
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:37008:-1
position: 37008
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:34545-34644:-1:exon

position:34545:-1
position: 34545
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:34644:-1
position: 34644
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:31142-31228:-1:exon

position:31142:-1
position: 31142
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:31228:-1
position: 31228
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:21238-26546:-1:exon

position:26546:-1
position: 26546
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

ADAT1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 87175
gene: ADAT1
product: adenosine deaminase tRNA specific 1, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 2 ESTs, 4 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_030956275.1
SIO_010081: ADAT1
subclass of: SO_0000673
so part of: ADAT1
location: complement(join(26276..26546,31142..31228,34545..34644,36863..37008,39478..40090,41626..41753,42520..42574,44257..44325,45092..45213,45732..45913))
location: region:26276-45913:-1
so has part: feature:45732-45913:-1:exon
so has part: feature:45092-45213:-1:exon
so has part: feature:44257-44325:-1:exon
so has part: feature:42520-42574:-1:exon
so has part: feature:41626-41753:-1:exon
so has part: feature:39478-40090:-1:exon
so has part: feature:36863-37008:-1:exon
so has part: feature:34545-34644:-1:exon
so has part: feature:31142-31228:-1:exon
so has part: feature:26276-26546:-1:exon

position:26276:-1
position: 26276
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:45732-45913:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:45092-45213:-1:exon

position:45213:-1
position: 45213
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:44257-44325:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:42520-42574:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:41626-41753:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:39478-40090:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:36863-37008:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:34545-34644:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:31142-31228:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:26276-26546:-1:exon

ADAT1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 87175
gene: ADAT1
product: adenosine deaminase tRNA specific 1, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 2 ESTs, 7 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_030956274.1
SIO_010081: ADAT1
subclass of: SO_0000673
so part of: ADAT1
location: complement(join(26276..26546,31142..31228,34545..34644,36863..37008,39478..40090,41626..41753,42520..42574,44257..44325,45092..45285,45486..45836))
location: region:26276-45836:-1
so has part: feature:45486-45836:-1:exon
so has part: feature:45092-45285:-1:exon
so has part: feature:44257-44325:-1:exon
so has part: feature:42520-42574:-1:exon
so has part: feature:41626-41753:-1:exon
so has part: feature:39478-40090:-1:exon
so has part: feature:36863-37008:-1:exon
so has part: feature:34545-34644:-1:exon
so has part: feature:31142-31228:-1:exon
so has part: feature:26276-26546:-1:exon

position:45836:-1
position: 45836
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:45486-45836:-1:exon

position:45486:-1
position: 45486
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:45092-45285:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:44257-44325:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:42520-42574:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:41626-41753:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:39478-40090:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:36863-37008:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:34545-34644:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:31142-31228:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:26276-26546:-1:exon

ADAT1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 87175
gene: ADAT1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: tRNA-specific adenosine deaminase 1 isoform X1
translation: MWSADEIAGLCYLHYRTRLPKQGKPDPNREWTSLAAVVKVESAVQTEAFDSPGNLQVTKEVVAMGTGTKCIGQNKMRKTGDILNDSHAEIVAKRSFQRYLLHQLWLAASHQQCIFSPGTETGKWKLKPNIIFIFFSSHTPCGDASIFPISEPENQLPKPVTEGHAAGQSAECRNDHNHLCPEDKRKSEKMARNCIIKRMKTDDGGCFSTEDLAVHHESVKREDNTNQKSCECSAEKQRANKESGLVRPKVVDVHRTGAKCVPGELNDARIPGLGYHCVGLLRVKPGRGDRTCSMSCSDKLARWNVLGCQGALLMHFLQYPVYLSAVIVGKCPYSQEAMRRAVIERCQHISSLPDGFLTQEIKLLQSDLQFEHSRQAIQEVQSNSKTKLVPCGAAISWSAVPEQPLDVTSDGFRQGTTKKGIGSHQSRSKICKVELFHKFQKLVTSISQEDLPDALRMKTLKTYWDYKEAALNYQEAWRVLRSQALLGWVKNAKEYLHFT
SIO_010081: ADAT1
subclass of: SO_0000673
so part of: ADAT1
location: complement(join(26414..26546,31142..31228,34545..34644,36863..37008,39478..40090,41626..41753,42520..42574,44257..44325,45092..45260))
location: region:26414-45260:-1
so has part: feature:45092-45260:-1:exon
so has part: feature:44257-44325:-1:exon
so has part: feature:42520-42574:-1:exon
so has part: feature:41626-41753:-1:exon
so has part: feature:39478-40090:-1:exon
so has part: feature:36863-37008:-1:exon
so has part: feature:34545-34644:-1:exon
so has part: feature:31142-31228:-1:exon
so has part: feature:26414-26546:-1:exon

XP_030812133.1
type: Protein
SIO_000068: ncbiprotein

position:26414:-1
position: 26414
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:45260:-1
position: 45260
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:45092-45260:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:44257-44325:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:42520-42574:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:41626-41753:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:39478-40090:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:36863-37008:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:34545-34644:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:31142-31228:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:26414-26546:-1:exon

ADAT1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 87175
gene: ADAT1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: tRNA-specific adenosine deaminase 1 isoform X1
translation: MWSADEIAGLCYLHYRTRLPKQGKPDPNREWTSLAAVVKVESAVQTEAFDSPGNLQVTKEVVAMGTGTKCIGQNKMRKTGDILNDSHAEIVAKRSFQRYLLHQLWLAASHQQCIFSPGTETGKWKLKPNIIFIFFSSHTPCGDASIFPISEPENQLPKPVTEGHAAGQSAECRNDHNHLCPEDKRKSEKMARNCIIKRMKTDDGGCFSTEDLAVHHESVKREDNTNQKSCECSAEKQRANKESGLVRPKVVDVHRTGAKCVPGELNDARIPGLGYHCVGLLRVKPGRGDRTCSMSCSDKLARWNVLGCQGALLMHFLQYPVYLSAVIVGKCPYSQEAMRRAVIERCQHISSLPDGFLTQEIKLLQSDLQFEHSRQAIQEVQSNSKTKLVPCGAAISWSAVPEQPLDVTSDGFRQGTTKKGIGSHQSRSKICKVELFHKFQKLVTSISQEDLPDALRMKTLKTYWDYKEAALNYQEAWRVLRSQALLGWVKNAKEYLHFT
SIO_010081: ADAT1
subclass of: SO_0000673
so part of: ADAT1
location: complement(join(26414..26546,31142..31228,34545..34644,36863..37008,39478..40090,41626..41753,42520..42574,44257..44325,45092..45260))
location: region:26414-45260:-1
so has part: feature:45092-45260:-1:exon
so has part: feature:44257-44325:-1:exon
so has part: feature:42520-42574:-1:exon
so has part: feature:41626-41753:-1:exon
so has part: feature:39478-40090:-1:exon
so has part: feature:36863-37008:-1:exon
so has part: feature:34545-34644:-1:exon
so has part: feature:31142-31228:-1:exon
so has part: feature:26414-26546:-1:exon

XP_030812134.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:45092-45260:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:44257-44325:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:42520-42574:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:41626-41753:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:39478-40090:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:36863-37008:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:34545-34644:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:31142-31228:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:26414-26546:-1:exon

ADAT1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 87175
gene: ADAT1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: tRNA-specific adenosine deaminase 1 isoform X2
translation: MGTGTKCIGQNKMRKTGDILNDSHAEIVAKRSFQRYLLHQLWLAASHQQCIFSPGTETGKWKLKPNIIFIFFSSHTPCGDASIFPISEPENQLPKPVTEGHAAGQSAECRNDHNHLCPEDKRKSEKMARNCIIKRMKTDDGGCFSTEDLAVHHESVKREDNTNQKSCECSAEKQRANKESGLVRPKVVDVHRTGAKCVPGELNDARIPGLGYHCVGLLRVKPGRGDRTCSMSCSDKLARWNVLGCQGALLMHFLQYPVYLSAVIVGKCPYSQEAMRRAVIERCQHISSLPDGFLTQEIKLLQSDLQFEHSRQAIQEVQSNSKTKLVPCGAAISWSAVPEQPLDVTSDGFRQGTTKKGIGSHQSRSKICKVELFHKFQKLVTSISQEDLPDALRMKTLKTYWDYKEAALNYQEAWRVLRSQALLGWVKNAKEYLHFT
SIO_010081: ADAT1
subclass of: SO_0000673
so part of: ADAT1
location: complement(join(26414..26546,31142..31228,34545..34644,36863..37008,39478..40090,41626..41753,42520..42574,44257..44305))
location: region:26414-44305:-1
so has part: feature:44257-44305:-1:exon
so has part: feature:42520-42574:-1:exon
so has part: feature:41626-41753:-1:exon
so has part: feature:39478-40090:-1:exon
so has part: feature:36863-37008:-1:exon
so has part: feature:34545-34644:-1:exon
so has part: feature:31142-31228:-1:exon
so has part: feature:26414-26546:-1:exon

XP_030812135.1
type: Protein
SIO_000068: ncbiprotein

position:44305:-1
position: 44305
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:44257-44305:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:42520-42574:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:41626-41753:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:39478-40090:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:36863-37008:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:34545-34644:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:31142-31228:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:26414-26546:-1:exon

KARS1
type: Gene
subclass of: SO_0000704
RO_0002162: 87175
gene: KARS1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(45919..54441)
location: region:45919-54441:-1
so has part: feature:45919-54441:-1:exon
subclass of: SO_0000010

115907999
type: Gene
SIO_000068: ncbigene

position:45919:-1
position: 45919
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:54441:-1
position: 54441
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:45919-54441:-1:exon

KARS1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 87175
gene: KARS1
product: lysyl-tRNA synthetase 1, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 52 ESTs, 7 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
transcript id: XM_030956272.1
SIO_010081: KARS1
subclass of: SO_0000673
so part of: KARS1
location: complement(join(45919..46069,46365..46508,48184..48310,48626..48711,49502..49587,50335..50508,50603..50765,50971..51090,51831..51956,52213..52399,52665..52758,53138..53303,53511..53655,54344..54441))
location: region:45919-54441:-1
so has part: feature:54344-54441:-1:exon
so has part: feature:53511-53655:-1:exon
so has part: feature:53138-53303:-1:exon
so has part: feature:52665-52758:-1:exon
so has part: feature:52213-52399:-1:exon
so has part: feature:51831-51956:-1:exon
so has part: feature:50971-51090:-1:exon
so has part: feature:50603-50765:-1:exon
so has part: feature:50335-50508:-1:exon
so has part: feature:49502-49587:-1:exon
so has part: feature:48626-48711:-1:exon
so has part: feature:48184-48310:-1:exon
so has part: feature:46365-46508:-1:exon
so has part: feature:45919-46069:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:54344-54441:-1:exon

position:54344:-1
position: 54344
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:53511-53655:-1:exon

position:53511:-1
position: 53511
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:53655:-1
position: 53655
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:53138-53303:-1:exon

position:53138:-1
position: 53138
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:53303:-1
position: 53303
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:52665-52758:-1:exon

position:52665:-1
position: 52665
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:52758:-1
position: 52758
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:52213-52399:-1:exon

position:52213:-1
position: 52213
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:52399:-1
position: 52399
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:51831-51956:-1:exon

position:51831:-1
position: 51831
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:51956:-1
position: 51956
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:50971-51090:-1:exon

position:50971:-1
position: 50971
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:51090:-1
position: 51090
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:50603-50765:-1:exon

position:50603:-1
position: 50603
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:50765:-1
position: 50765
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:50335-50508:-1:exon

position:50335:-1
position: 50335
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:50508:-1
position: 50508
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:49502-49587:-1:exon

position:49502:-1
position: 49502
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:49587:-1
position: 49587
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:48626-48711:-1:exon

position:48626:-1
position: 48626
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:48711:-1
position: 48711
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:48184-48310:-1:exon

position:48184:-1
position: 48184
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:48310:-1
position: 48310
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:46365-46508:-1:exon

position:46365:-1
position: 46365
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:46508:-1
position: 46508
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:45919-46069:-1:exon

position:46069:-1
position: 46069
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

KARS1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 87175
gene: KARS1
product: lysyl-tRNA synthetase 1, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 29 ESTs, 9 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
transcript id: XM_030956271.1
SIO_010081: KARS1
subclass of: SO_0000673
so part of: KARS1
location: complement(join(45919..46069,46365..46508,48184..48310,48626..48711,49502..49587,50335..50508,50603..50765,50971..51090,51831..51956,52213..52399,52665..52758,53138..53303,53511..53655,54146..54323))
location: region:45919-54323:-1
so has part: feature:54146-54323:-1:exon
so has part: feature:53511-53655:-1:exon
so has part: feature:53138-53303:-1:exon
so has part: feature:52665-52758:-1:exon
so has part: feature:52213-52399:-1:exon
so has part: feature:51831-51956:-1:exon
so has part: feature:50971-51090:-1:exon
so has part: feature:50603-50765:-1:exon
so has part: feature:50335-50508:-1:exon
so has part: feature:49502-49587:-1:exon
so has part: feature:48626-48711:-1:exon
so has part: feature:48184-48310:-1:exon
so has part: feature:46365-46508:-1:exon
so has part: feature:45919-46069:-1:exon

position:54323:-1
position: 54323
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:54146-54323:-1:exon

position:54146:-1
position: 54146
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:53511-53655:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:53138-53303:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:52665-52758:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:52213-52399:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:51831-51956:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:50971-51090:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:50603-50765:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:50335-50508:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:49502-49587:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:48626-48711:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:48184-48310:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:46365-46508:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:45919-46069:-1:exon

KARS1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 87175
gene: KARS1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: lysine--tRNA ligase isoform X2
translation: MMAASAAAGECNVEETESHLSKNELKRRLKAERKIAEKEAKQKEQSEKHSNKPSLTSEDNVGTDEESLDPNQYYKIRSHAVQQLKGSSEDPYPHKFHVDISLSDFIDKYSHLQPGDHLTNITVRVAGRIHAKRAAGGKLIFYDLRGEGVKLQVMANSSLYKSEEEYFRVNSKLRRGDIIGVEGNPGKTRKGELSIIPYEIILLSPCLHMLPHLHFGLKDKETRYRQRYLDLILNDYVRQKFITRAKIITYLRSFLDELGFLEVETPMMNVIPGGAVAKPFITYHNELDMNLYMRIAPELYHKMLVVGGLDRVYEIGRQFRNEGIDLTHNPEFTTCEFYMAYADYHDLMEITEKLLSGMVKHITGTYKITYHPDGQDGQAYEIDFTPPFRRISMVYDLEKVLGVKFPSTECFETEETRRFFDNLCVERNVECPPPRTTARLLDKLVGEFLEVTCINPTFICDHPQVMSPLAKWHRSLPGLTERFELFVMKKEVCNAYTELNDPFRQRQLFEDQAKAKAAGDDEAMFIDENFCTALEYGLPPTAGWGMGIDRLTMFLTDSNNIKEVLLFPAMKPEDSKKEAHPGEGTSV
SIO_010081: KARS1
subclass of: SO_0000673
so part of: KARS1
location: complement(join(45992..46069,46365..46508,48184..48310,48626..48711,49502..49587,50335..50508,50603..50765,50971..51090,51831..51956,52213..52399,52665..52758,53138..53303,53511..53655,54344..54411))
location: region:45992-54411:-1
so has part: feature:54344-54411:-1:exon
so has part: feature:53511-53655:-1:exon
so has part: feature:53138-53303:-1:exon
so has part: feature:52665-52758:-1:exon
so has part: feature:52213-52399:-1:exon
so has part: feature:51831-51956:-1:exon
so has part: feature:50971-51090:-1:exon
so has part: feature:50603-50765:-1:exon
so has part: feature:50335-50508:-1:exon
so has part: feature:49502-49587:-1:exon
so has part: feature:48626-48711:-1:exon
so has part: feature:48184-48310:-1:exon
so has part: feature:46365-46508:-1:exon
so has part: feature:45992-46069:-1:exon

XP_030812132.1
type: Protein
SIO_000068: ncbiprotein

position:45992:-1
position: 45992
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:54411:-1
position: 54411
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:54344-54411:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:53511-53655:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:53138-53303:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:52665-52758:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:52213-52399:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:51831-51956:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:50971-51090:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:50603-50765:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:50335-50508:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:49502-49587:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:48626-48711:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:48184-48310:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:46365-46508:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:45992-46069:-1:exon

KARS1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 87175
gene: KARS1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: lysine--tRNA ligase isoform X1
translation: MLSSGAARLRSWVWRAAPALRRQQALHDRSSELKRRLKAERKIAEKEAKQKEQSEKHSNKPSLTSEDNVGTDEESLDPNQYYKIRSHAVQQLKGSSEDPYPHKFHVDISLSDFIDKYSHLQPGDHLTNITVRVAGRIHAKRAAGGKLIFYDLRGEGVKLQVMANSSLYKSEEEYFRVNSKLRRGDIIGVEGNPGKTRKGELSIIPYEIILLSPCLHMLPHLHFGLKDKETRYRQRYLDLILNDYVRQKFITRAKIITYLRSFLDELGFLEVETPMMNVIPGGAVAKPFITYHNELDMNLYMRIAPELYHKMLVVGGLDRVYEIGRQFRNEGIDLTHNPEFTTCEFYMAYADYHDLMEITEKLLSGMVKHITGTYKITYHPDGQDGQAYEIDFTPPFRRISMVYDLEKVLGVKFPSTECFETEETRRFFDNLCVERNVECPPPRTTARLLDKLVGEFLEVTCINPTFICDHPQVMSPLAKWHRSLPGLTERFELFVMKKEVCNAYTELNDPFRQRQLFEDQAKAKAAGDDEAMFIDENFCTALEYGLPPTAGWGMGIDRLTMFLTDSNNIKEVLLFPAMKPEDSKKEAHPGEGTSV
SIO_010081: KARS1
subclass of: SO_0000673
so part of: KARS1
location: complement(join(45992..46069,46365..46508,48184..48310,48626..48711,49502..49587,50335..50508,50603..50765,50971..51090,51831..51956,52213..52399,52665..52758,53138..53303,53511..53655,54146..54237))
location: region:45992-54237:-1
so has part: feature:54146-54237:-1:exon
so has part: feature:53511-53655:-1:exon
so has part: feature:53138-53303:-1:exon
so has part: feature:52665-52758:-1:exon
so has part: feature:52213-52399:-1:exon
so has part: feature:51831-51956:-1:exon
so has part: feature:50971-51090:-1:exon
so has part: feature:50603-50765:-1:exon
so has part: feature:50335-50508:-1:exon
so has part: feature:49502-49587:-1:exon
so has part: feature:48626-48711:-1:exon
so has part: feature:48184-48310:-1:exon
so has part: feature:46365-46508:-1:exon
so has part: feature:45992-46069:-1:exon

XP_030812131.1
type: Protein
SIO_000068: ncbiprotein

position:54237:-1
position: 54237
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:54146-54237:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:53511-53655:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:53138-53303:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:52665-52758:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:52213-52399:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:51831-51956:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:50971-51090:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:50603-50765:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:50335-50508:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:49502-49587:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:48626-48711:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:48184-48310:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:46365-46508:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:45992-46069:-1:exon

TERF2IP
type: Gene
subclass of: SO_0000704
RO_0002162: 87175
gene: TERF2IP
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 54159..56952
location: region:54159-56952:1
so has part: feature:54159-56952:1:exon
subclass of: SO_0000010

115908003
type: Gene
SIO_000068: ncbigene

position:54159:1
position: 54159
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:56952:1
position: 56952
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:54159-56952:1:exon

TERF2IP
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 87175
gene: TERF2IP
product: TERF2 interacting protein
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, 8 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XM_030956280.1
SIO_010081: TERF2IP
subclass of: SO_0000673
so part of: TERF2IP
location: join(54159..54962,55068..55144,55723..56952)
location: region:54159-56952:1
so has part: feature:54159-54962:1:exon
so has part: feature:55068-55144:1:exon
so has part: feature:55723-56952:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:54159-54962:1:exon

position:54962:1
position: 54962
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:55068-55144:1:exon

position:55068:1
position: 55068
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:55144:1
position: 55144
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:55723-56952:1:exon

position:55723:1
position: 55723
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

TERF2IP
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 87175
gene: TERF2IP
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: telomeric repeat-binding factor 2-interacting protein 1
translation: MAAGGGGAAMTGGQAGAARSRSLFLWDDGHPMRFYLRPGLAKLRLAPLVLAGGGRLCRVQEPGAVLLAQPGEVAPDGAVSTEYVAECVKRNQRLPLEPFLLTARGRLAFTEAEDAALLQAVRGQGMVRVSGRALWIELERSGLTRHSWQAMRDRYLRHLLPRLWEPPQTEDPTQIRGLFAAANREFESTESESDSSDVAELSTQDGMRRSPGETASELKTGPEDSAFPDIQLQRQERPQSTCSSSSVVGQVIKTMEHFMEKFAVDLLTVTQAFLKNSGDVEATSYFLQTGQRLDGYPVWSREDDLELQKDDEHVRNKLIAKFGAENVAKRIMFRES
SIO_010081: TERF2IP
subclass of: SO_0000673
so part of: TERF2IP
location: join(54470..54962,55068..55144,55723..56163)
location: region:54470-56163:1
so has part: feature:54470-54962:1:exon
so has part: feature:55068-55144:1:exon
so has part: feature:55723-56163:1:exon

XP_030812140.1
type: Protein
SIO_000068: ncbiprotein

position:54470:1
position: 54470
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:56163:1
position: 56163
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:54470-54962:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:55068-55144:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:55723-56163:1:exon

CHST4
type: Gene
subclass of: SO_0000704
RO_0002162: 87175
gene: CHST4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(60789..89600)
location: region:60789-89600:-1
so has part: feature:60789-89600:-1:exon
subclass of: SO_0000010

115907817
type: Gene
SIO_000068: ncbigene

position:60789:-1
position: 60789
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:89600:-1
position: 89600
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:60789-89600:-1:exon

CHST4
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 87175
gene: CHST4
product: carbohydrate sulfotransferase 4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 13 Proteins, and 78% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_030955975.1
SIO_010081: CHST4
subclass of: SO_0000673
so part of: CHST4
location: complement(join(60789..62735,88460..88598,89245..89600))
location: region:60789-89600:-1
so has part: feature:89245-89600:-1:exon
so has part: feature:88460-88598:-1:exon
so has part: feature:60789-62735:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:89245-89600:-1:exon

position:89245:-1
position: 89245
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:88460-88598:-1:exon

position:88460:-1
position: 88460
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:88598:-1
position: 88598
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:60789-62735:-1:exon

position:62735:-1
position: 62735
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

CHST4
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 87175
gene: CHST4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: carbohydrate sulfotransferase 4
translation: MHLRLRSLAIMVKSRRMPVLLILVVLSFLLIHFLPCSNNAHMEEKPSPVHILILSSWRSGSSFTGQIFSQHPSVFYLMEPAWHVWVKMYQNSAKVLHMAVRDLVRSVFLCDMSVFDAYMSSQKKKSDLFQWETSRALCSPPACDSFSRSDIITAGNCKTICGKYPFSKVEEACKTYSHVAIKEVRFFDLKVLYPLLTDPSLNLKIIHLVRDPRAVFRSRENTKADLKRDSNIVVGSQKTKGEMGPYNTMQVICKSHVEIYKAGSQTAPSFLKDRYLLVRYEDIVRDPLARAAQMYRFAELHFTPELQKWVHNITHGKGHGAQAFDIGSRDALRVSQAWRKTLPFQKIEKVQNVCKDAMDLLGYRLVQSEEEQKNMSLDLLFAQNSSEYQILKAEKLVSASTF
SIO_010081: CHST4
subclass of: SO_0000673
so part of: CHST4
location: complement(join(61544..62735,88460..88476))
location: region:61544-88476:-1
so has part: feature:88460-88476:-1:exon
so has part: feature:61544-62735:-1:exon

XP_030811835.1
type: Protein
SIO_000068: ncbiprotein

position:61544:-1
position: 61544
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:88476:-1
position: 88476
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:88460-88476:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:61544-62735:-1:exon

TAT
type: Gene
subclass of: SO_0000704
RO_0002162: 87175
gene: TAT
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(74035..83653)
location: region:74035-83653:-1
so has part: feature:74035-83653:-1:exon
subclass of: SO_0000010

115907816
type: Gene
SIO_000068: ncbigene

position:74035:-1
position: 74035
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:83653:-1
position: 83653
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:74035-83653:-1:exon

TAT
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 87175
gene: TAT
product: tyrosine aminotransferase
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 17 Proteins, and 82% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_030955974.1
SIO_010081: TAT
subclass of: SO_0000673
so part of: TAT
location: complement(join(74035..74707,75445..75543,77092..77175,77618..77746,78645..78797,79154..79206,79724..79862,80031..80189,80570..80637,81398..81502,81682..81924,83537..83653))
location: region:74035-83653:-1
so has part: feature:83537-83653:-1:exon
so has part: feature:81682-81924:-1:exon
so has part: feature:81398-81502:-1:exon
so has part: feature:80570-80637:-1:exon
so has part: feature:80031-80189:-1:exon
so has part: feature:79724-79862:-1:exon
so has part: feature:79154-79206:-1:exon
so has part: feature:78645-78797:-1:exon
so has part: feature:77618-77746:-1:exon
so has part: feature:77092-77175:-1:exon
so has part: feature:75445-75543:-1:exon
so has part: feature:74035-74707:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:83537-83653:-1:exon

position:83537:-1
position: 83537
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:81682-81924:-1:exon

position:81682:-1
position: 81682
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:81924:-1
position: 81924
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:81398-81502:-1:exon

position:81398:-1
position: 81398
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:81502:-1
position: 81502
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:80570-80637:-1:exon

position:80570:-1
position: 80570
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:80637:-1
position: 80637
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:80031-80189:-1:exon

position:80031:-1
position: 80031
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:80189:-1
position: 80189
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:79724-79862:-1:exon

position:79724:-1
position: 79724
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:79862:-1
position: 79862
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:79154-79206:-1:exon

position:79154:-1
position: 79154
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:79206:-1
position: 79206
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:78645-78797:-1:exon

position:78645:-1
position: 78645
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:78797:-1
position: 78797
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:77618-77746:-1:exon

position:77618:-1
position: 77618
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:77746:-1
position: 77746
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:77092-77175:-1:exon

position:77092:-1
position: 77092
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:77175:-1
position: 77175
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:75445-75543:-1:exon

position:75445:-1
position: 75445
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:75543:-1
position: 75543
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:74035-74707:-1:exon

position:74707:-1
position: 74707
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

TAT
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 87175
gene: TAT
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: tyrosine aminotransferase
translation: MDSYLIQVNGHGDHAPVLDVHLKSTGNTISPGKVKGRKPRWAVRASEMSKKTFNPIRAIVDSMKVEPNPKKAMISLSLGDPTVFGNLPTNDEVTRAVKEVLDSGQYNGYAPSVGYQSCREAVAAYYNCPEAPLKAQDVILTSGCSQAIELALAVLANPGQNILVPRPGFSLYKTLALSLGIEVKLYNLLPEQAWEIDLEHLESLVDEKTACLIVNNPSNPCGSVFSKSHLQEILAVASRQCVPILADEIYGDMVFADCKYEPIATLSASVPVLSCGGLAKRWLVPGWRMGWILIHDRRDIFGNEIRDGLVRLSQRILGPCTIVQGALERILHRTPPEFYHNTLSILKSNADVCYAALSAIPGLQPVRPAGAMYLMVEIEMEHFPEFENDVEFTERLISEQSVFCLPATCFEYPNFFRVVTTVPEEMILEACSRIQEFCEMHYQGAEGAQDLECDK
SIO_010081: TAT
subclass of: SO_0000673
so part of: TAT
location: complement(join(74564..74707,75445..75543,77092..77175,77618..77746,78645..78797,79154..79206,79724..79862,80031..80189,80570..80637,81398..81502,81682..81916))
location: region:74564-81916:-1
so has part: feature:81682-81916:-1:exon
so has part: feature:81398-81502:-1:exon
so has part: feature:80570-80637:-1:exon
so has part: feature:80031-80189:-1:exon
so has part: feature:79724-79862:-1:exon
so has part: feature:79154-79206:-1:exon
so has part: feature:78645-78797:-1:exon
so has part: feature:77618-77746:-1:exon
so has part: feature:77092-77175:-1:exon
so has part: feature:75445-75543:-1:exon
so has part: feature:74564-74707:-1:exon

XP_030811834.1
type: Protein
SIO_000068: ncbiprotein

position:74564:-1
position: 74564
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:81916:-1
position: 81916
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:81682-81916:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:81398-81502:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:80570-80637:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:80031-80189:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:79724-79862:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:79154-79206:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:78645-78797:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:77618-77746:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:77092-77175:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:75445-75543:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:74564-74707:-1:exon

MARVELD3
type: Gene
subclass of: SO_0000704
RO_0002162: 87175
gene: MARVELD3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 89693..92081
location: region:89693-92081:1
so has part: feature:89693-92081:1:exon
subclass of: SO_0000010

115907764
type: Gene
SIO_000068: ncbigene

position:89693:1
position: 89693
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:92081:1
position: 92081
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:89693-92081:1:exon

MARVELD3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 87175
gene: MARVELD3
product: MARVEL domain containing 3
exception: unclassified transcription discrepancy
note: The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: inserted 1 base in 1 codon; deleted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 81% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_030955877.1
SIO_010081: MARVELD3
subclass of: SO_0000673
so part of: MARVELD3
location: join(89693..89706,89899..90079,90218..92081)
location: region:89693-92081:1
so has part: feature:89693-89706:1:exon
so has part: feature:89899-90079:1:exon
so has part: feature:90218-92081:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:89693-89706:1:exon

position:89706:1
position: 89706
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:89899-90079:1:exon

position:89899:1
position: 89899
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:90079:1
position: 90079
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:90218-92081:1:exon

position:90218:1
position: 90218
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

MARVELD3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 87175
gene: MARVELD3
exception: unclassified translation discrepancy
note: The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: inserted 1 base in 1 codon; deleted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: LOW QUALITY PROTEIN: MARVEL domain-containing protein 3
translation: MFCGREAPPGRRRADETELTAPAVPRGGPARPPGPSAGRAGPRRAMAERGCPRAARGERAGAGRRAVPAPEAEGPRGSRTVPGSLERRRCLYLHTGRGERGRREPLPLSCGAQXAGPAPSRALLCGRRLISASPPAFCQMVEVLLAVLILVCSSVSCGSAGGYTGLPALGGIYYYQYGGAYSGFGGAEGERAQQLDQHFYLLKLPIARAAMGVAGCLLVFPCVLILVGVLQVPWHFPAWLLIECTLYIVIAVSTVPALYYFLQSLLSVYHSSVCKEREQLYQSKGYQGFWCSLHGAEIAAGLLGCMTAMAYLLSAGLAVRDYRTVHEQKQKPLQL
SIO_010081: MARVELD3
subclass of: SO_0000673
so part of: MARVELD3
location: join(89693..89706,89899..90079,90218..91030)
location: region:89693-91030:1
so has part: feature:89693-89706:1:exon
so has part: feature:89899-90079:1:exon
so has part: feature:90218-91030:1:exon

XP_030811737.1
type: Protein
SIO_000068: ncbiprotein

position:91030:1
position: 91030
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:89693-89706:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:89899-90079:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:90218-91030:1:exon

PHLPP2
type: Gene
subclass of: SO_0000704
RO_0002162: 87175
gene: PHLPP2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(91213..124933)
location: region:91213-124933:-1
so has part: feature:91213-124933:-1:exon
subclass of: SO_0000010

115907699
type: Gene
SIO_000068: ncbigene

position:91213:-1
position: 91213
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:124933:-1
position: 124933
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:91213-124933:-1:exon

PHLPP2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 87175
gene: PHLPP2
product: PH domain and leucine rich repeat protein phosphatase 2, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 11 ESTs, 13 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_030955726.1
SIO_010081: PHLPP2
subclass of: SO_0000673
so part of: PHLPP2
location: complement(join(91213..97917,99233..99464,99593..99781,100239..100349,100736..100866,102118..102280,102783..102983,103638..103793,105082..105177,105700..105760,106260..106462,107204..107434,108896..109042,113032..113186,114283..114408,114837..115027,119468..119601,124338..124582,124784..124933))
location: region:91213-124933:-1
so has part: feature:124784-124933:-1:exon
so has part: feature:124338-124582:-1:exon
so has part: feature:119468-119601:-1:exon
so has part: feature:114837-115027:-1:exon
so has part: feature:114283-114408:-1:exon
so has part: feature:113032-113186:-1:exon
so has part: feature:108896-109042:-1:exon
so has part: feature:107204-107434:-1:exon
so has part: feature:106260-106462:-1:exon
so has part: feature:105700-105760:-1:exon
so has part: feature:105082-105177:-1:exon
so has part: feature:103638-103793:-1:exon
so has part: feature:102783-102983:-1:exon
so has part: feature:102118-102280:-1:exon
so has part: feature:100736-100866:-1:exon
so has part: feature:100239-100349:-1:exon
so has part: feature:99593-99781:-1:exon
so has part: feature:99233-99464:-1:exon
so has part: feature:91213-97917:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:124784-124933:-1:exon

position:124784:-1
position: 124784
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:124338-124582:-1:exon

position:124338:-1
position: 124338
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:124582:-1
position: 124582
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:119468-119601:-1:exon

position:119468:-1
position: 119468
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:119601:-1
position: 119601
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:114837-115027:-1:exon

position:114837:-1
position: 114837
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:115027:-1
position: 115027
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:114283-114408:-1:exon

position:114283:-1
position: 114283
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:114408:-1
position: 114408
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:113032-113186:-1:exon

position:113032:-1
position: 113032
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:113186:-1
position: 113186
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:108896-109042:-1:exon

position:108896:-1
position: 108896
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:109042:-1
position: 109042
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:107204-107434:-1:exon

position:107204:-1
position: 107204
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:107434:-1
position: 107434
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:106260-106462:-1:exon

position:106260:-1
position: 106260
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:106462:-1
position: 106462
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:105700-105760:-1:exon

position:105700:-1
position: 105700
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:105760:-1
position: 105760
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:105082-105177:-1:exon

position:105082:-1
position: 105082
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:105177:-1
position: 105177
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:103638-103793:-1:exon

position:103638:-1
position: 103638
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:103793:-1
position: 103793
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:102783-102983:-1:exon

position:102783:-1
position: 102783
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:102983:-1
position: 102983
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:102118-102280:-1:exon

position:102118:-1
position: 102118
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:102280:-1
position: 102280
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:100736-100866:-1:exon

position:100736:-1
position: 100736
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:100866:-1
position: 100866
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:100239-100349:-1:exon

position:100239:-1
position: 100239
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:100349:-1
position: 100349
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:99593-99781:-1:exon

position:99593:-1
position: 99593
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:99781:-1
position: 99781
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:99233-99464:-1:exon

position:99233:-1
position: 99233
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:99464:-1
position: 99464
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:91213-97917:-1:exon

position:97917:-1
position: 97917
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

PHLPP2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 87175
gene: PHLPP2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: PH domain leucine-rich repeat-containing protein phosphatase 2 isoform X1
translation: MGEAGPAAGPAAGLGPREAQEPEEDEAAAPGGTRGCRAGSRGGIRVLKRNAKRTGSRSCQSRSRVGSRERTWLKGDVGRGCVYVYGRDSAAAAPSDLRLVLCTVDTQASEICDGEGRKNLFLQLHGDLVRRLEPTEKPLQIVYDYLARLGFDDPLRMQEEAANSDLSCMIRFYSEKPCQVEQLDRILLSGVYNVRKGKTQLHKWAERSVTLCGTCLIVSSVKDSHAGKMHILPLVGGKVEEMKRRQYTLAFTSAGAQAQTYHISFETLAECQRWHRQASTIVSMRFSMVDLSCYSLEEVPEHLFYSQDITYLNLRHNFMRTSGAGSLDSLCRFSQLKSLNLSHNRLGEFPVSLCEISTLTELNISCNGLHYLPSQIGKLLNLQTFCLDGNFLTSLPEEMGNLQQLSCLGLSFNNFCELPAICEKLVTLDKLALAGNLIETLDLTVLNRMGHIKSVDLRLNNLKRAAADTLEGNKSLAYMDLRDNQMTDLDLSSLVSLEQLHCERNKLRELTLSGFSLRALYASSNCLTAVNIYPVPGLLTCLELSHNQLQCVPDWACEAKKLEVLDVSYNLLLELPSRILRSLSLRKLMVGHNHLQSLPPLQEHIPLEVLDLQHNLLTKLPETLFVKALNLRYLNASANSLESLPSTCPGEGSLSMLQLLYLTNNNLTDQCIPVLVGHPNLRILHLANNNLQTFPASKLSKLEHLEELNLSGNKLKTIPTTVANCKLLHTLIAHSNEISIFPEILHLPRIQFVDLSCNELTEILIPEALPGALQELDLSGNTNLVLEHKTLDIFSHISTLKIDAKPSLTADSALTSVFWSHGVAEMAGQRNKLCVSSLALGSFAEGVEAVYGMFDGDKNEELPRLLQCTMADVLLEEVQQSDTMFMSNTFLVSHRKLGMAGQKLGSSAVLCYIRNEVADPASNFSLTVANVGTCQAVLCRSGKALPLSKVFSLEQCSEEARRVKEQKAIITEDNKVNGVTCCTRMLGCTYLHPWILPKPHVYSIPLTVQDELLLLGNKALWEHLSYAEAVSAVRDLHDPLAAAKKLCTLAQSYGCQDNVGAMVVCLNISEDNCTCEMHGLTLTGPGGFSSTTTKPATPSCSSGIASEFSSELSASEVSSEVGSTASDEHSAVGLDGSLLPRQERRCSLHPMPPSSIFQRQPSSATFSSNQSDNGLDSDDEQPVEGVMTNGSKVEVEVDIHCCKGKGLELEHPAAEYSSSAPGPEDDSGLVLVIRRQNSVNSNTVQRGVKEKCELQKSLSTCCLYGKKLSNGSIVPLEESLNLIEVATEAPKKKTGYFAAPSQMEPEDQFVVPPDLEEEVKEQMKQHQEDGADQELKEEHAASLPEEFDTAL
SIO_010081: PHLPP2
subclass of: SO_0000673
so part of: PHLPP2
location: complement(join(96778..97917,99233..99464,99593..99781,100239..100349,100736..100866,102118..102280,102783..102983,103638..103793,105082..105177,105700..105760,106260..106462,107204..107434,108896..109042,113032..113186,114283..114408,114837..115027,119468..119601,124338..124582,124784..124927))
location: region:96778-124927:-1
so has part: feature:124784-124927:-1:exon
so has part: feature:124338-124582:-1:exon
so has part: feature:119468-119601:-1:exon
so has part: feature:114837-115027:-1:exon
so has part: feature:114283-114408:-1:exon
so has part: feature:113032-113186:-1:exon
so has part: feature:108896-109042:-1:exon
so has part: feature:107204-107434:-1:exon
so has part: feature:106260-106462:-1:exon
so has part: feature:105700-105760:-1:exon
so has part: feature:105082-105177:-1:exon
so has part: feature:103638-103793:-1:exon
so has part: feature:102783-102983:-1:exon
so has part: feature:102118-102280:-1:exon
so has part: feature:100736-100866:-1:exon
so has part: feature:100239-100349:-1:exon
so has part: feature:99593-99781:-1:exon
so has part: feature:99233-99464:-1:exon
so has part: feature:96778-97917:-1:exon

XP_030811586.1
type: Protein
SIO_000068: ncbiprotein

position:96778:-1
position: 96778
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:124927:-1
position: 124927
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:124784-124927:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:124338-124582:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:119468-119601:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:114837-115027:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:114283-114408:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:113032-113186:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:108896-109042:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:107204-107434:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:106260-106462:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:105700-105760:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:105082-105177:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:103638-103793:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:102783-102983:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:102118-102280:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:100736-100866:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:100239-100349:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:99593-99781:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:99233-99464:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:96778-97917:-1:exon

PHLPP2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 87175
gene: PHLPP2
product: PH domain and leucine rich repeat protein phosphatase 2, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_030955727.1
SIO_010081: PHLPP2
subclass of: SO_0000673
so part of: PHLPP2
location: complement(join(99271..99464,99646..99781,100239..100349,100736..100866,102118..102280,102783..102983,103638..103793,105082..105177,105700..105760,106260..106462,107204..107434,108896..109042,113032..113186,114283..114408,114837..115027,119468..119601,124338..124582,124784..124929))
location: region:99271-124929:-1
so has part: feature:124784-124929:-1:exon
so has part: feature:124338-124582:-1:exon
so has part: feature:119468-119601:-1:exon
so has part: feature:114837-115027:-1:exon
so has part: feature:114283-114408:-1:exon
so has part: feature:113032-113186:-1:exon
so has part: feature:108896-109042:-1:exon
so has part: feature:107204-107434:-1:exon
so has part: feature:106260-106462:-1:exon
so has part: feature:105700-105760:-1:exon
so has part: feature:105082-105177:-1:exon
so has part: feature:103638-103793:-1:exon
so has part: feature:102783-102983:-1:exon
so has part: feature:102118-102280:-1:exon
so has part: feature:100736-100866:-1:exon
so has part: feature:100239-100349:-1:exon
so has part: feature:99646-99781:-1:exon
so has part: feature:99271-99464:-1:exon

position:99271:-1
position: 99271
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:124929:-1
position: 124929
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:124784-124929:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:124338-124582:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:119468-119601:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:114837-115027:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:114283-114408:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:113032-113186:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:108896-109042:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:107204-107434:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:106260-106462:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:105700-105760:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:105082-105177:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:103638-103793:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:102783-102983:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:102118-102280:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:100736-100866:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:100239-100349:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:99646-99781:-1:exon

position:99646:-1
position: 99646
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:99271-99464:-1:exon

PHLPP2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 87175
gene: PHLPP2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: PH domain leucine-rich repeat-containing protein phosphatase 2 isoform X2
translation: MGEAGPAAGPAAGLGPREAQEPEEDEAAAPGGTRGCRAGSRGGIRVLKRNAKRTGSRSCQSRSRVGSRERTWLKGDVGRGCVYVYGRDSAAAAPSDLRLVLCTVDTQASEICDGEGRKNLFLQLHGDLVRRLEPTEKPLQIVYDYLARLGFDDPLRMQEEAANSDLSCMIRFYSEKPCQVEQLDRILLSGVYNVRKGKTQLHKWAERSVTLCGTCLIVSSVKDSHAGKMHILPLVGGKVEEMKRRQYTLAFTSAGAQAQTYHISFETLAECQRWHRQASTIVSMRFSMVDLSCYSLEEVPEHLFYSQDITYLNLRHNFMRTSGAGSLDSLCRFSQLKSLNLSHNRLGEFPVSLCEISTLTELNISCNGLHYLPSQIGKLLNLQTFCLDGNFLTSLPEEMGNLQQLSCLGLSFNNFCELPAICEKLVTLDKLALAGNLIETLDLTVLNRMGHIKSVDLRLNNLKRAAADTLEGNKSLAYMDLRDNQMTDLDLSSLVSLEQLHCERNKLRELTLSGFSLRALYASSNCLTAVNIYPVPGLLTCLELSHNQLQCVPDWACEAKKLEVLDVSYNLLLELPSRILRSLSLRKLMVGHNHLQSLPPLQEHIPLEVLDLQHNLLTKLPETLFVKALNLRYLNASANSLESLPSTCPGEGSLSMLQLLYLTNNNLTDQCIPVLVGHPNLRILHLANNNLQTFPASKLSKLEHLEELNLSGNKLKTIPTTVANCKLLHTLIAHSNEISIFPEILHLPRIQFVDLSCNELTEILIPEALPGALQELDLSGNTNLVLEHKTLDIFSHISTLKIDAKPSLTADSALTSVFWSHGVAEMAGQRNKLCVSSLALGSFAEGVEAVYGMFDGDKNEELPRLLQCTMADVLLEEEAGHGWAEAGFLCCPLLHS
SIO_010081: PHLPP2
subclass of: SO_0000673
so part of: PHLPP2
location: complement(join(99405..99464,99646..99781,100239..100349,100736..100866,102118..102280,102783..102983,103638..103793,105082..105177,105700..105760,106260..106462,107204..107434,108896..109042,113032..113186,114283..114408,114837..115027,119468..119601,124338..124582,124784..124927))
location: region:99405-124927:-1
so has part: feature:124784-124927:-1:exon
so has part: feature:124338-124582:-1:exon
so has part: feature:119468-119601:-1:exon
so has part: feature:114837-115027:-1:exon
so has part: feature:114283-114408:-1:exon
so has part: feature:113032-113186:-1:exon
so has part: feature:108896-109042:-1:exon
so has part: feature:107204-107434:-1:exon
so has part: feature:106260-106462:-1:exon
so has part: feature:105700-105760:-1:exon
so has part: feature:105082-105177:-1:exon
so has part: feature:103638-103793:-1:exon
so has part: feature:102783-102983:-1:exon
so has part: feature:102118-102280:-1:exon
so has part: feature:100736-100866:-1:exon
so has part: feature:100239-100349:-1:exon
so has part: feature:99646-99781:-1:exon
so has part: feature:99405-99464:-1:exon

XP_030811587.1
type: Protein
SIO_000068: ncbiprotein

position:99405:-1
position: 99405
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:124784-124927:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:124338-124582:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:119468-119601:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:114837-115027:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:114283-114408:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:113032-113186:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:108896-109042:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:107204-107434:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:106260-106462:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:105700-105760:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:105082-105177:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:103638-103793:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:102783-102983:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:102118-102280:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:100736-100866:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:100239-100349:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:99646-99781:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:99405-99464:-1:exon

AP1G1
type: Gene
subclass of: SO_0000704
RO_0002162: 87175
gene: AP1G1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(128534..164835)
location: region:128534-164835:-1
so has part: feature:128534-164835:-1:exon
subclass of: SO_0000010

115907700
type: Gene
SIO_000068: ncbigene

position:128534:-1
position: 128534
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:164835:-1
position: 164835
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:128534-164835:-1:exon

AP1G1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 87175
gene: AP1G1
product: adaptor related protein complex 1 subunit gamma 1, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 mRNAs, 41 ESTs, 6 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_030955729.1
SIO_010081: AP1G1
subclass of: SO_0000673
so part of: AP1G1
location: complement(join(128534..129781,131862..131960,132944..133104,133340..133435,133866..133992,134561..134702,135183..135287,135857..135984,136483..136572,136878..137000,138092..138146,138442..138582,141637..141750,142162..142217,142626..142724,142969..143049,143512..143607,144659..144667,145744..145820,146642..146738,147947..148088,150256..150380,155309..155512,164538..164835))
location: region:128534-164835:-1
so has part: feature:164538-164835:-1:exon
so has part: feature:155309-155512:-1:exon
so has part: feature:150256-150380:-1:exon
so has part: feature:147947-148088:-1:exon
so has part: feature:146642-146738:-1:exon
so has part: feature:145744-145820:-1:exon
so has part: feature:144659-144667:-1:exon
so has part: feature:143512-143607:-1:exon
so has part: feature:142969-143049:-1:exon
so has part: feature:142626-142724:-1:exon
so has part: feature:142162-142217:-1:exon
so has part: feature:141637-141750:-1:exon
so has part: feature:138442-138582:-1:exon
so has part: feature:138092-138146:-1:exon
so has part: feature:136878-137000:-1:exon
so has part: feature:136483-136572:-1:exon
so has part: feature:135857-135984:-1:exon
so has part: feature:135183-135287:-1:exon
so has part: feature:134561-134702:-1:exon
so has part: feature:133866-133992:-1:exon
so has part: feature:133340-133435:-1:exon
so has part: feature:132944-133104:-1:exon
so has part: feature:131862-131960:-1:exon
so has part: feature:128534-129781:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:164538-164835:-1:exon

position:164538:-1
position: 164538
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:155309-155512:-1:exon

position:155309:-1
position: 155309
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:155512:-1
position: 155512
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:150256-150380:-1:exon

position:150256:-1
position: 150256
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:150380:-1
position: 150380
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:147947-148088:-1:exon

position:147947:-1
position: 147947
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:148088:-1
position: 148088
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:146642-146738:-1:exon

position:146642:-1
position: 146642
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:146738:-1
position: 146738
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:145744-145820:-1:exon

position:145744:-1
position: 145744
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:145820:-1
position: 145820
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:144659-144667:-1:exon

position:144659:-1
position: 144659
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:144667:-1
position: 144667
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:143512-143607:-1:exon

position:143512:-1
position: 143512
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:143607:-1
position: 143607
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:142969-143049:-1:exon

position:142969:-1
position: 142969
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:143049:-1
position: 143049
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:142626-142724:-1:exon

position:142626:-1
position: 142626
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:142724:-1
position: 142724
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:142162-142217:-1:exon

position:142162:-1
position: 142162
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:142217:-1
position: 142217
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:141637-141750:-1:exon

position:141637:-1
position: 141637
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:141750:-1
position: 141750
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:138442-138582:-1:exon

position:138442:-1
position: 138442
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:138582:-1
position: 138582
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:138092-138146:-1:exon

position:138092:-1
position: 138092
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:138146:-1
position: 138146
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:136878-137000:-1:exon

position:136878:-1
position: 136878
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:137000:-1
position: 137000
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:136483-136572:-1:exon

position:136483:-1
position: 136483
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:136572:-1
position: 136572
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:135857-135984:-1:exon

position:135857:-1
position: 135857
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:135984:-1
position: 135984
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:135183-135287:-1:exon

position:135183:-1
position: 135183
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:135287:-1
position: 135287
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:134561-134702:-1:exon

position:134561:-1
position: 134561
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:134702:-1
position: 134702
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:133866-133992:-1:exon

position:133866:-1
position: 133866
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:133992:-1
position: 133992
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:133340-133435:-1:exon

position:133340:-1
position: 133340
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:133435:-1
position: 133435
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 22
SIO_000628: feature:132944-133104:-1:exon

position:132944:-1
position: 132944
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:133104:-1
position: 133104
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 23
SIO_000628: feature:131862-131960:-1:exon

position:131862:-1
position: 131862
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:131960:-1
position: 131960
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 24
SIO_000628: feature:128534-129781:-1:exon

position:129781:-1
position: 129781
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

AP1G1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 87175
gene: AP1G1
product: adaptor related protein complex 1 subunit gamma 1, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 39 ESTs, 13 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XM_030955730.1
SIO_010081: AP1G1
subclass of: SO_0000673
so part of: AP1G1
location: complement(join(128534..129781,131862..131960,132944..133104,133340..133435,133866..133992,134561..134702,135183..135287,135857..135984,136483..136572,136878..137000,138092..138146,138442..138582,141637..141750,142162..142217,142626..142724,142969..143049,143512..143607,145744..145820,146642..146738,147947..148088,150256..150380,155309..155512,164258..164527))
location: region:128534-164527:-1
so has part: feature:164258-164527:-1:exon
so has part: feature:155309-155512:-1:exon
so has part: feature:150256-150380:-1:exon
so has part: feature:147947-148088:-1:exon
so has part: feature:146642-146738:-1:exon
so has part: feature:145744-145820:-1:exon
so has part: feature:143512-143607:-1:exon
so has part: feature:142969-143049:-1:exon
so has part: feature:142626-142724:-1:exon
so has part: feature:142162-142217:-1:exon
so has part: feature:141637-141750:-1:exon
so has part: feature:138442-138582:-1:exon
so has part: feature:138092-138146:-1:exon
so has part: feature:136878-137000:-1:exon
so has part: feature:136483-136572:-1:exon
so has part: feature:135857-135984:-1:exon
so has part: feature:135183-135287:-1:exon
so has part: feature:134561-134702:-1:exon
so has part: feature:133866-133992:-1:exon
so has part: feature:133340-133435:-1:exon
so has part: feature:132944-133104:-1:exon
so has part: feature:131862-131960:-1:exon
so has part: feature:128534-129781:-1:exon

position:164527:-1
position: 164527
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:164258-164527:-1:exon

position:164258:-1
position: 164258
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:155309-155512:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:150256-150380:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:147947-148088:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:146642-146738:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:145744-145820:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:143512-143607:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:142969-143049:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:142626-142724:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:142162-142217:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:141637-141750:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:138442-138582:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:138092-138146:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:136878-137000:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:136483-136572:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:135857-135984:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:135183-135287:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:134561-134702:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:133866-133992:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:133340-133435:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:132944-133104:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:131862-131960:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:128534-129781:-1:exon

AP1G1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 87175
gene: AP1G1
product: adaptor related protein complex 1 subunit gamma 1, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 mRNAs, 43 ESTs, 6 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XM_030955728.1
SIO_010081: AP1G1
subclass of: SO_0000673
so part of: AP1G1
location: complement(join(128534..129781,131862..131960,132944..133104,133340..133435,133866..133992,134561..134702,135183..135287,135857..135984,136483..136572,136878..137000,138092..138146,138442..138582,141637..141750,142162..142217,142626..142724,142969..143049,143512..143607,144659..144667,145744..145820,146642..146738,147947..148088,150256..150380,155309..155512,164258..164527))
location: region:128534-164527:-1
so has part: feature:164258-164527:-1:exon
so has part: feature:155309-155512:-1:exon
so has part: feature:150256-150380:-1:exon
so has part: feature:147947-148088:-1:exon
so has part: feature:146642-146738:-1:exon
so has part: feature:145744-145820:-1:exon
so has part: feature:144659-144667:-1:exon
so has part: feature:143512-143607:-1:exon
so has part: feature:142969-143049:-1:exon
so has part: feature:142626-142724:-1:exon
so has part: feature:142162-142217:-1:exon
so has part: feature:141637-141750:-1:exon
so has part: feature:138442-138582:-1:exon
so has part: feature:138092-138146:-1:exon
so has part: feature:136878-137000:-1:exon
so has part: feature:136483-136572:-1:exon
so has part: feature:135857-135984:-1:exon
so has part: feature:135183-135287:-1:exon
so has part: feature:134561-134702:-1:exon
so has part: feature:133866-133992:-1:exon
so has part: feature:133340-133435:-1:exon
so has part: feature:132944-133104:-1:exon
so has part: feature:131862-131960:-1:exon
so has part: feature:128534-129781:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:164258-164527:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:155309-155512:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:150256-150380:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:147947-148088:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:146642-146738:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:145744-145820:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:144659-144667:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:143512-143607:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:142969-143049:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:142626-142724:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:142162-142217:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:141637-141750:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:138442-138582:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:138092-138146:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:136878-137000:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:136483-136572:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:135857-135984:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:135183-135287:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:134561-134702:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:133866-133992:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:133340-133435:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:132944-133104:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:131862-131960:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:128534-129781:-1:exon

AP1G1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 87175
gene: AP1G1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: AP-1 complex subunit gamma-1 isoform X2
translation: MPAPIRLRELIRTIRTARTQAEEREMIQKECAAIRSSFREEDNTYRCRNVAKLLYMHMLGYPAHFGQLECLKLIASQKFTDKRIGYLGAMLLLDERQDVHLLMTNCIKNDLNHSTQYVQGLALCTLGCMGSSEMCRDLAGEVEKLLKTSNSYLRKKAALCAVHVIRKVPELMEMFLPATKNLLNEKNHGVLHTSVVLLTEMCERSPDMLAHFRKLVPQLVRILKNLIMSGYSPEHDVSGISDPFLQVRILRLLRILGRNDDDSSEAMNDILAQVATNTETSKNVGNAILYETVLTIMDIKSESGLRVLAINILGRFLLNNDKNIRYVALTSLLKTVQTDHNAVQRHRSTIVDCLKDLDVSIKRRAMELSFALVNGNNVRGMMKELLYFLDSCEPEFKADCASGIFLAAEKYAPSKRWHIDTIMRVLTTAGSYVRDDAVPNLIQLITNSVEMHAYTVQRLYKAILGDYSQQPLVQVASWCIGEYGDLLVSGQCEEEEPIQVTEDEVLDILESVLISNMSASVTRGYALTAIMKLSTRFTCTVNRIKKVVSIYGSSIDVELQQRAVEYNALFKKYDHMRPALLERMPVMEKVTTNGPAEIVQTNGETDTAVLETKPPPSGLQPANQANDLLDLLGGSDITPVIPTAPTSKPATAGGELLDLLGDLNLTGSPVSAPAPQIAQPPFLLDGLTTQPLFNDIAAGIPSITAYNKNGLKIDFTFERSNTNPSVTVITIQASNSTELEMTDFVFQAAVPKTFQLQLLSPSSSVIPAFNSGTITQVIKVLNPQKQQLRMRIKLTYNHKGSAMQDLAEVNNFPPQSWQ
SIO_010081: AP1G1
subclass of: SO_0000673
so part of: AP1G1
location: complement(join(129680..129781,131862..131960,132944..133104,133340..133435,133866..133992,134561..134702,135183..135287,135857..135984,136483..136572,136878..137000,138092..138146,138442..138582,141637..141750,142162..142217,142626..142724,142969..143049,143512..143607,145744..145820,146642..146738,147947..148088,150256..150380,155309..155509))
location: region:129680-155509:-1
so has part: feature:155309-155509:-1:exon
so has part: feature:150256-150380:-1:exon
so has part: feature:147947-148088:-1:exon
so has part: feature:146642-146738:-1:exon
so has part: feature:145744-145820:-1:exon
so has part: feature:143512-143607:-1:exon
so has part: feature:142969-143049:-1:exon
so has part: feature:142626-142724:-1:exon
so has part: feature:142162-142217:-1:exon
so has part: feature:141637-141750:-1:exon
so has part: feature:138442-138582:-1:exon
so has part: feature:138092-138146:-1:exon
so has part: feature:136878-137000:-1:exon
so has part: feature:136483-136572:-1:exon
so has part: feature:135857-135984:-1:exon
so has part: feature:135183-135287:-1:exon
so has part: feature:134561-134702:-1:exon
so has part: feature:133866-133992:-1:exon
so has part: feature:133340-133435:-1:exon
so has part: feature:132944-133104:-1:exon
so has part: feature:131862-131960:-1:exon
so has part: feature:129680-129781:-1:exon

XP_030811590.1
type: Protein
SIO_000068: ncbiprotein

position:129680:-1
position: 129680
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:155509:-1
position: 155509
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:155309-155509:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:150256-150380:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:147947-148088:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:146642-146738:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:145744-145820:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:143512-143607:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:142969-143049:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:142626-142724:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:142162-142217:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:141637-141750:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:138442-138582:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:138092-138146:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:136878-137000:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:136483-136572:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:135857-135984:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:135183-135287:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:134561-134702:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:133866-133992:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:133340-133435:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:132944-133104:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:131862-131960:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:129680-129781:-1:exon

AP1G1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 87175
gene: AP1G1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: AP-1 complex subunit gamma-1 isoform X1
translation: MPAPIRLRELIRTIRTARTQAEEREMIQKECAAIRSSFREEDNTYRCRNVAKLLYMHMLGYPAHFGQLECLKLIASQKFTDKRIGYLGAMLLLDERQDVHLLMTNCIKNDLNHSTQYVQGLALCTLGCMGSSEMCRDLAGEVEKLLKTSNSYLRKKAALCAVHVIRKVPELMEMFLPATKNLLNEKNHGVLHTSVVLLTEMCERSPDMLAHFRKNEKLVPQLVRILKNLIMSGYSPEHDVSGISDPFLQVRILRLLRILGRNDDDSSEAMNDILAQVATNTETSKNVGNAILYETVLTIMDIKSESGLRVLAINILGRFLLNNDKNIRYVALTSLLKTVQTDHNAVQRHRSTIVDCLKDLDVSIKRRAMELSFALVNGNNVRGMMKELLYFLDSCEPEFKADCASGIFLAAEKYAPSKRWHIDTIMRVLTTAGSYVRDDAVPNLIQLITNSVEMHAYTVQRLYKAILGDYSQQPLVQVASWCIGEYGDLLVSGQCEEEEPIQVTEDEVLDILESVLISNMSASVTRGYALTAIMKLSTRFTCTVNRIKKVVSIYGSSIDVELQQRAVEYNALFKKYDHMRPALLERMPVMEKVTTNGPAEIVQTNGETDTAVLETKPPPSGLQPANQANDLLDLLGGSDITPVIPTAPTSKPATAGGELLDLLGDLNLTGSPVSAPAPQIAQPPFLLDGLTTQPLFNDIAAGIPSITAYNKNGLKIDFTFERSNTNPSVTVITIQASNSTELEMTDFVFQAAVPKTFQLQLLSPSSSVIPAFNSGTITQVIKVLNPQKQQLRMRIKLTYNHKGSAMQDLAEVNNFPPQSWQ
SIO_010081: AP1G1
subclass of: SO_0000673
so part of: AP1G1
location: complement(join(129680..129781,131862..131960,132944..133104,133340..133435,133866..133992,134561..134702,135183..135287,135857..135984,136483..136572,136878..137000,138092..138146,138442..138582,141637..141750,142162..142217,142626..142724,142969..143049,143512..143607,144659..144667,145744..145820,146642..146738,147947..148088,150256..150380,155309..155509))
location: region:129680-155509:-1
so has part: feature:155309-155509:-1:exon
so has part: feature:150256-150380:-1:exon
so has part: feature:147947-148088:-1:exon
so has part: feature:146642-146738:-1:exon
so has part: feature:145744-145820:-1:exon
so has part: feature:144659-144667:-1:exon
so has part: feature:143512-143607:-1:exon
so has part: feature:142969-143049:-1:exon
so has part: feature:142626-142724:-1:exon
so has part: feature:142162-142217:-1:exon
so has part: feature:141637-141750:-1:exon
so has part: feature:138442-138582:-1:exon
so has part: feature:138092-138146:-1:exon
so has part: feature:136878-137000:-1:exon
so has part: feature:136483-136572:-1:exon
so has part: feature:135857-135984:-1:exon
so has part: feature:135183-135287:-1:exon
so has part: feature:134561-134702:-1:exon
so has part: feature:133866-133992:-1:exon
so has part: feature:133340-133435:-1:exon
so has part: feature:132944-133104:-1:exon
so has part: feature:131862-131960:-1:exon
so has part: feature:129680-129781:-1:exon

XP_030811588.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:155309-155509:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:150256-150380:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:147947-148088:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:146642-146738:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:145744-145820:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:144659-144667:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:143512-143607:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:142969-143049:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:142626-142724:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:142162-142217:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:141637-141750:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:138442-138582:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:138092-138146:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:136878-137000:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:136483-136572:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:135857-135984:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:135183-135287:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:134561-134702:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:133866-133992:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:133340-133435:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:132944-133104:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:131862-131960:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:129680-129781:-1:exon

AP1G1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 87175
gene: AP1G1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: AP-1 complex subunit gamma-1 isoform X1
translation: MPAPIRLRELIRTIRTARTQAEEREMIQKECAAIRSSFREEDNTYRCRNVAKLLYMHMLGYPAHFGQLECLKLIASQKFTDKRIGYLGAMLLLDERQDVHLLMTNCIKNDLNHSTQYVQGLALCTLGCMGSSEMCRDLAGEVEKLLKTSNSYLRKKAALCAVHVIRKVPELMEMFLPATKNLLNEKNHGVLHTSVVLLTEMCERSPDMLAHFRKNEKLVPQLVRILKNLIMSGYSPEHDVSGISDPFLQVRILRLLRILGRNDDDSSEAMNDILAQVATNTETSKNVGNAILYETVLTIMDIKSESGLRVLAINILGRFLLNNDKNIRYVALTSLLKTVQTDHNAVQRHRSTIVDCLKDLDVSIKRRAMELSFALVNGNNVRGMMKELLYFLDSCEPEFKADCASGIFLAAEKYAPSKRWHIDTIMRVLTTAGSYVRDDAVPNLIQLITNSVEMHAYTVQRLYKAILGDYSQQPLVQVASWCIGEYGDLLVSGQCEEEEPIQVTEDEVLDILESVLISNMSASVTRGYALTAIMKLSTRFTCTVNRIKKVVSIYGSSIDVELQQRAVEYNALFKKYDHMRPALLERMPVMEKVTTNGPAEIVQTNGETDTAVLETKPPPSGLQPANQANDLLDLLGGSDITPVIPTAPTSKPATAGGELLDLLGDLNLTGSPVSAPAPQIAQPPFLLDGLTTQPLFNDIAAGIPSITAYNKNGLKIDFTFERSNTNPSVTVITIQASNSTELEMTDFVFQAAVPKTFQLQLLSPSSSVIPAFNSGTITQVIKVLNPQKQQLRMRIKLTYNHKGSAMQDLAEVNNFPPQSWQ
SIO_010081: AP1G1
subclass of: SO_0000673
so part of: AP1G1
location: complement(join(129680..129781,131862..131960,132944..133104,133340..133435,133866..133992,134561..134702,135183..135287,135857..135984,136483..136572,136878..137000,138092..138146,138442..138582,141637..141750,142162..142217,142626..142724,142969..143049,143512..143607,144659..144667,145744..145820,146642..146738,147947..148088,150256..150380,155309..155509))
location: region:129680-155509:-1
so has part: feature:155309-155509:-1:exon
so has part: feature:150256-150380:-1:exon
so has part: feature:147947-148088:-1:exon
so has part: feature:146642-146738:-1:exon
so has part: feature:145744-145820:-1:exon
so has part: feature:144659-144667:-1:exon
so has part: feature:143512-143607:-1:exon
so has part: feature:142969-143049:-1:exon
so has part: feature:142626-142724:-1:exon
so has part: feature:142162-142217:-1:exon
so has part: feature:141637-141750:-1:exon
so has part: feature:138442-138582:-1:exon
so has part: feature:138092-138146:-1:exon
so has part: feature:136878-137000:-1:exon
so has part: feature:136483-136572:-1:exon
so has part: feature:135857-135984:-1:exon
so has part: feature:135183-135287:-1:exon
so has part: feature:134561-134702:-1:exon
so has part: feature:133866-133992:-1:exon
so has part: feature:133340-133435:-1:exon
so has part: feature:132944-133104:-1:exon
so has part: feature:131862-131960:-1:exon
so has part: feature:129680-129781:-1:exon

XP_030811589.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:155309-155509:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:150256-150380:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:147947-148088:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:146642-146738:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:145744-145820:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:144659-144667:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:143512-143607:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:142969-143049:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:142626-142724:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:142162-142217:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:141637-141750:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:138442-138582:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:138092-138146:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:136878-137000:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:136483-136572:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:135857-135984:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:135183-135287:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:134561-134702:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:133866-133992:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:133340-133435:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:132944-133104:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:131862-131960:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:129680-129781:-1:exon

LOC115908088
type: Gene
subclass of: SO_0000704
RO_0002162: 87175
gene: LOC115908088
note: Derived by automated computational analysis using gene prediction method: cmsearch.
so part of: sequence
location: complement(140154..140240)
location: region:140154-140240:-1
so has part: feature:140154-140240:-1:exon
subclass of: SO_0000578

115908088
type: Gene
SIO_000068: ncbigene

position:140154:-1
position: 140154
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:140240:-1
position: 140240
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:140154-140240:-1:exon

LOC115908088
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 87175
nc RNA class: snoRNA
gene: LOC115908088
product: small nucleolar RNA SNORD71
inference: COORDINATES: nucleotide motif:Rfam:12.0:RF00576
inference: COORDINATES: profile:INFERNAL:1.1.1
note: Derived by automated computational analysis using gene prediction method: cmsearch.
transcript id: XR_004061092.1
SIO_010081: LOC115908088
subclass of: SO_0000673
so part of: LOC115908088
location: complement(140154..140240)
location: region:140154-140240:-1
so has part: feature:140154-140240:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:140154-140240:-1:exon

ATXN1L
type: Gene
subclass of: SO_0000704
RO_0002162: 87175
gene: ATXN1L
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 165257..172144
location: region:165257-172144:1
so has part: feature:165257-172144:1:exon
subclass of: SO_0000010

115907701
type: Gene
SIO_000068: ncbigene

position:165257:1
position: 165257
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:172144:1
position: 172144
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:165257-172144:1:exon

ATXN1L
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 87175
gene: ATXN1L
product: ataxin 1 like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 ESTs, 5 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_030955731.1
SIO_010081: ATXN1L
subclass of: SO_0000673
so part of: ATXN1L
location: join(165257..165316,165549..172144)
location: region:165257-172144:1
so has part: feature:165257-165316:1:exon
so has part: feature:165549-172144:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:165257-165316:1:exon

position:165316:1
position: 165316
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:165549-172144:1:exon

position:165549:1
position: 165549
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

ATXN1L
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 87175
gene: ATXN1L
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: ataxin-1-like
translation: MRAGHERSQECLPPKKRELAAANTGTEAGRAGGAQGSGEGPEWARTARPAPATPRYGPGEAPEAAAGLTVDQYGMLYKVAAPPATFSPTGLHPVVNVSPLPPAFNVTSPIIQHPAVPFPSIHYAQIPSASLQLIGSHYTVPYAVPPAFMPSPLLSPSTNLTAPHVPHFVPYASLFTEEAAPSPQTTSPMHSFNKSTSTASPGQMQHHAVPQPVDMAPGRIPVYYQMSRLPPGYSAYEAPVAGGSPESPQQDSQLSSEGAATNGGQRPLEQSVARRPSEAVDSASSAAEDCLAPGAAAACMGDGQFLPGYQMLGREISVPTHRSTPDADLEVQRVVGVLASQDYHVLAAPKKDDPSPLNLCRNTPDGQGDMLRNTTDRAAAGNSQSRSPCGMSPEETVRQRQLAKGMVIANGKPVLVPIGSEPVRSSISEALLRESPDAQARGNVLEKELAQGQPPSSSQLPSHFMKGAIIQLATGELKRVEELQTQDFVRSAEVSGGLKIDSSTVVDIQESQWPGLVTLHFVVGEQQSKVSIDVPPEHPFFVYGQGWSSCSPARTAQLFALPCHRLQVGDVCISISLQSVNGNSASQANSPLGDQLVSARERLEQTAQGPREPSDRAAERKSHTDRASVAQSSRAESSQPEAGSLYSLAPGFQRYSVQAEEPRPPLLRPSFIPQEVKLSIEGRSNAGK
SIO_010081: ATXN1L
subclass of: SO_0000673
so part of: ATXN1L
location: 165659..167725
location: region:165659-167725:1
so has part: feature:165659-167725:1:exon

XP_030811591.1
type: Protein
SIO_000068: ncbiprotein

position:165659:1
position: 165659
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:167725:1
position: 167725
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:165659-167725:1:exon

ZNF821
type: Gene
subclass of: SO_0000704
RO_0002162: 87175
gene: ZNF821
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(173966..186504)
location: region:173966-186504:-1
so has part: feature:173966-186504:-1:exon
subclass of: SO_0000010

115907702
type: Gene
SIO_000068: ncbigene

position:173966:-1
position: 173966
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:186504:-1
position: 186504
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:173966-186504:-1:exon

ZNF821
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 87175
gene: ZNF821
product: zinc finger protein 821, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 ESTs, 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_030955732.1
SIO_010081: ZNF821
subclass of: SO_0000673
so part of: ZNF821
location: complement(join(173966..174888,175581..175747,176619..176723,177228..177370,177814..177939,178036..178146,184699..184790,185840..185991,186173..186504))
location: region:173966-186504:-1
so has part: feature:186173-186504:-1:exon
so has part: feature:185840-185991:-1:exon
so has part: feature:184699-184790:-1:exon
so has part: feature:178036-178146:-1:exon
so has part: feature:177814-177939:-1:exon
so has part: feature:177228-177370:-1:exon
so has part: feature:176619-176723:-1:exon
so has part: feature:175581-175747:-1:exon
so has part: feature:173966-174888:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:186173-186504:-1:exon

position:186173:-1
position: 186173
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:185840-185991:-1:exon

position:185840:-1
position: 185840
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:185991:-1
position: 185991
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:184699-184790:-1:exon

position:184699:-1
position: 184699
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:184790:-1
position: 184790
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:178036-178146:-1:exon

position:178036:-1
position: 178036
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:178146:-1
position: 178146
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:177814-177939:-1:exon

position:177814:-1
position: 177814
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:177939:-1
position: 177939
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:177228-177370:-1:exon

position:177228:-1
position: 177228
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:177370:-1
position: 177370
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:176619-176723:-1:exon

position:176619:-1
position: 176619
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:176723:-1
position: 176723
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:175581-175747:-1:exon

position:175581:-1
position: 175581
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:175747:-1
position: 175747
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:173966-174888:-1:exon

position:174888:-1
position: 174888
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

ZNF821
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 87175
gene: ZNF821
product: zinc finger protein 821, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 7 ESTs, 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_030955733.1
SIO_010081: ZNF821
subclass of: SO_0000673
so part of: ZNF821
location: complement(join(173966..174888,175581..175747,176619..176723,177228..177370,177814..177939,184699..184790,185840..185991,186173..186503))
location: region:173966-186503:-1
so has part: feature:186173-186503:-1:exon
so has part: feature:185840-185991:-1:exon
so has part: feature:184699-184790:-1:exon
so has part: feature:177814-177939:-1:exon
so has part: feature:177228-177370:-1:exon
so has part: feature:176619-176723:-1:exon
so has part: feature:175581-175747:-1:exon
so has part: feature:173966-174888:-1:exon

position:186503:-1
position: 186503
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:186173-186503:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:185840-185991:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:184699-184790:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:177814-177939:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:177228-177370:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:176619-176723:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:175581-175747:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:173966-174888:-1:exon

ZNF821
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 87175
gene: ZNF821
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: zinc finger protein 821 isoform X2
translation: MSRRKQTTPNKVHWEQVFAGLEEQARQAMMKNNFRGTLGDQRPTIHPLQDPDSSSSGSDDEETTQDEVSSHTSEEDGSMVKVKKELENAERPVAGTPLIRENEVPGSVNAEPMLGLSQCPLCQLECGSRDQLIAHVYQHTGAVVSAKSYLCPVCGRALSSPGSLGRHLLIHSEDQLSNCAVCGARFTSHATFNSEKLPEVLSANRLPAPQSQGPSSAEGKDVAFCTPVYPAGILLVCNNCAAYRKLLEAQSPGMRKWALRRQNEPLEVRLQRLERERTAKKSRRDNETPEEREVRRMRDREAKRLQRMQETDEQRARRLQRDREAMRLKRANETPGKRQARLIREREAKRLKRRLEKMDMMLRAQFGQDPSAMAALAAEMNFFQLPVSNVELESQLLGKMTFEEQSNSALH
SIO_010081: ZNF821
subclass of: SO_0000673
so part of: ZNF821
location: complement(join(174234..174888,175581..175747,176619..176723,177228..177370,177814..177939,184699..184738))
location: region:174234-184738:-1
so has part: feature:184699-184738:-1:exon
so has part: feature:177814-177939:-1:exon
so has part: feature:177228-177370:-1:exon
so has part: feature:176619-176723:-1:exon
so has part: feature:175581-175747:-1:exon
so has part: feature:174234-174888:-1:exon

XP_030811593.1
type: Protein
SIO_000068: ncbiprotein

position:174234:-1
position: 174234
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:184738:-1
position: 184738
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:184699-184738:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:177814-177939:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:177228-177370:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:176619-176723:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:175581-175747:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:174234-174888:-1:exon

ZNF821
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 87175
gene: ZNF821
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: zinc finger protein 821 isoform X1
translation: MSRRKQTTPNKVHCTGLTSAGARGWCGRVGKQRSDLSAFQEVTPEVLHGAGEQVFAGLEEQARQAMMKNNFRGTLGDQRPTIHPLQDPDSSSSGSDDEETTQDEVSSHTSEEDGSMVKVKKELENAERPVAGTPLIRENEVPGSVNAEPMLGLSQCPLCQLECGSRDQLIAHVYQHTGAVVSAKSYLCPVCGRALSSPGSLGRHLLIHSEDQLSNCAVCGARFTSHATFNSEKLPEVLSANRLPAPQSQGPSSAEGKDVAFCTPVYPAGILLVCNNCAAYRKLLEAQSPGMRKWALRRQNEPLEVRLQRLERERTAKKSRRDNETPEEREVRRMRDREAKRLQRMQETDEQRARRLQRDREAMRLKRANETPGKRQARLIREREAKRLKRRLEKMDMMLRAQFGQDPSAMAALAAEMNFFQLPVSNVELESQLLGKMTFEEQSNSALH
SIO_010081: ZNF821
subclass of: SO_0000673
so part of: ZNF821
location: complement(join(174234..174888,175581..175747,176619..176723,177228..177370,177814..177939,178036..178146,184699..184738))
location: region:174234-184738:-1
so has part: feature:184699-184738:-1:exon
so has part: feature:178036-178146:-1:exon
so has part: feature:177814-177939:-1:exon
so has part: feature:177228-177370:-1:exon
so has part: feature:176619-176723:-1:exon
so has part: feature:175581-175747:-1:exon
so has part: feature:174234-174888:-1:exon

XP_030811592.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:184699-184738:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:178036-178146:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:177814-177939:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:177228-177370:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:176619-176723:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:175581-175747:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:174234-174888:-1:exon

IST1
type: Gene
subclass of: SO_0000704
RO_0002162: 87175
gene: IST1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 186520..193327
location: region:186520-193327:1
so has part: feature:186520-193327:1:exon
subclass of: SO_0000010

115907705
type: Gene
SIO_000068: ncbigene

position:186520:1
position: 186520
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:193327:1
position: 193327
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:186520-193327:1:exon

IST1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 87175
gene: IST1
product: IST1 factor associated with ESCRT-III
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 26 ESTs, 6 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
transcript id: XM_030955736.1
SIO_010081: IST1
subclass of: SO_0000673
so part of: IST1
location: join(186520..186650,187605..187704,188360..188540,188767..188854,189123..189206,189583..189693,189998..190204,191280..191372,192490..192535,192697..193327)
location: region:186520-193327:1
so has part: feature:186520-186650:1:exon
so has part: feature:187605-187704:1:exon
so has part: feature:188360-188540:1:exon
so has part: feature:188767-188854:1:exon
so has part: feature:189123-189206:1:exon
so has part: feature:189583-189693:1:exon
so has part: feature:189998-190204:1:exon
so has part: feature:191280-191372:1:exon
so has part: feature:192490-192535:1:exon
so has part: feature:192697-193327:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:186520-186650:1:exon

position:186650:1
position: 186650
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:187605-187704:1:exon

position:187605:1
position: 187605
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:187704:1
position: 187704
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:188360-188540:1:exon

position:188360:1
position: 188360
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:188540:1
position: 188540
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:188767-188854:1:exon

position:188767:1
position: 188767
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:188854:1
position: 188854
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:189123-189206:1:exon

position:189123:1
position: 189123
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:189206:1
position: 189206
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:189583-189693:1:exon

position:189583:1
position: 189583
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:189693:1
position: 189693
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:189998-190204:1:exon

position:189998:1
position: 189998
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:190204:1
position: 190204
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:191280-191372:1:exon

position:191280:1
position: 191280
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:191372:1
position: 191372
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:192490-192535:1:exon

position:192490:1
position: 192490
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:192535:1
position: 192535
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:192697-193327:1:exon

position:192697:1
position: 192697
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

IST1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 87175
gene: IST1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: IST1 homolog
translation: MLGSGFKAERLRVNLRLVINRLKLLEKKKTELAQKARKEIADYLAAGKDERARIRVEHIIREDYLVEAMEILELYCDLLLARFGLIQSMKELDSGLAEAVSTLIWAAPRLQSEVAELKIVADQLCAKYSKEYGKLCRTNQIGTVNDRLMHKLSVEAPPKILVERYLIEIAKNYNVPYEPDSVVMAEAPPGGEADLIDVGFTDDVKKGGHGGGGGGGFTAPMIGHDGLVPMPVMMPMPMPTTNPPFSYPPPKGPENFSGLPVGTYQPFSNIHPPPIPANPPTYESIDEPNADKDAAALVPGLEPKPEASPKPRAGAPNTFDNFVLPELPSVPDTLPTASAGANSSASEDIDFDDLSRRFEELKKKT
SIO_010081: IST1
subclass of: SO_0000673
so part of: IST1
location: join(187617..187704,188360..188540,188767..188854,189123..189206,189583..189693,189998..190204,191280..191372,192490..192535,192697..192896)
location: region:187617-192896:1
so has part: feature:187617-187704:1:exon
so has part: feature:188360-188540:1:exon
so has part: feature:188767-188854:1:exon
so has part: feature:189123-189206:1:exon
so has part: feature:189583-189693:1:exon
so has part: feature:189998-190204:1:exon
so has part: feature:191280-191372:1:exon
so has part: feature:192490-192535:1:exon
so has part: feature:192697-192896:1:exon

XP_030811596.1
type: Protein
SIO_000068: ncbiprotein

position:187617:1
position: 187617
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:192896:1
position: 192896
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:187617-187704:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:188360-188540:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:188767-188854:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:189123-189206:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:189583-189693:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:189998-190204:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:191280-191372:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:192490-192535:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:192697-192896:1:exon

DHODH
type: Gene
subclass of: SO_0000704
RO_0002162: 87175
gene: DHODH
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 193375..197754
location: region:193375-197754:1
so has part: feature:193375-197754:1:exon
subclass of: SO_0000010

115907704
type: Gene
SIO_000068: ncbigene

position:193375:1
position: 193375
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:197754:1
position: 197754
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:193375-197754:1:exon

DHODH
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 87175
gene: DHODH
product: dihydroorotate dehydrogenase (quinone), transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, 10 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_030955734.1
SIO_010081: DHODH
subclass of: SO_0000673
so part of: DHODH
location: join(193375..193424,193669..193863,194122..194321,194542..194624,195189..195376,195843..195956,196225..196378,196452..196611,196730..197754)
location: region:193375-197754:1
so has part: feature:193375-193424:1:exon
so has part: feature:193669-193863:1:exon
so has part: feature:194122-194321:1:exon
so has part: feature:194542-194624:1:exon
so has part: feature:195189-195376:1:exon
so has part: feature:195843-195956:1:exon
so has part: feature:196225-196378:1:exon
so has part: feature:196452-196611:1:exon
so has part: feature:196730-197754:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:193375-193424:1:exon

position:193424:1
position: 193424
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:193669-193863:1:exon

position:193669:1
position: 193669
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:193863:1
position: 193863
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:194122-194321:1:exon

position:194122:1
position: 194122
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:194321:1
position: 194321
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:194542-194624:1:exon

position:194542:1
position: 194542
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:194624:1
position: 194624
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:195189-195376:1:exon

position:195189:1
position: 195189
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:195376:1
position: 195376
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:195843-195956:1:exon

position:195843:1
position: 195843
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:195956:1
position: 195956
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:196225-196378:1:exon

position:196225:1
position: 196225
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:196378:1
position: 196378
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:196452-196611:1:exon

position:196452:1
position: 196452
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:196611:1
position: 196611
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:196730-197754:1:exon

position:196730:1
position: 196730
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

DHODH
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 87175
gene: DHODH
product: dihydroorotate dehydrogenase (quinone), transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_030955735.1
SIO_010081: DHODH
subclass of: SO_0000673
so part of: DHODH
location: join(193375..193424,193669..193863,194122..194321,194542..194624,195189..195376,195843..195956,196225..196378,196452..196611,196920..197754)
location: region:193375-197754:1
so has part: feature:193375-193424:1:exon
so has part: feature:193669-193863:1:exon
so has part: feature:194122-194321:1:exon
so has part: feature:194542-194624:1:exon
so has part: feature:195189-195376:1:exon
so has part: feature:195843-195956:1:exon
so has part: feature:196225-196378:1:exon
so has part: feature:196452-196611:1:exon
so has part: feature:196920-197754:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:193375-193424:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:193669-193863:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:194122-194321:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:194542-194624:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:195189-195376:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:195843-195956:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:196225-196378:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:196452-196611:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:196920-197754:1:exon

position:196920:1
position: 196920
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

DHODH
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 87175
gene: DHODH
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: dihydroorotate dehydrogenase (quinone), mitochondrial isoform X2
translation: MAAPLRGRLRALVLGGCGLLLGSALAAGDERLYAAVMPALRALPPEAAHGLALRAAALGLLPSTRPDSPALEVRVFGQRFRNPLGLAAGFDKQCEAVDGLYKMGFGFVEVGTVTPRPQEGNPKPRVFRLAEDEAVINRYGFNSHGHVVVERRLRARQETQIRLTAAGMPLGVNLGKNKSSTDAAADYVAGVRTLGPLADYLVVNVSSPNTPGLRDLQGKAELRDLLSKVLVERDLLPCKQKPALLVKIAPDLTAQDKQDIASVVCELGVDGLIVSNTTVSRPSSLRSRQGTEPGGLSGKPLRELSTQTIRDMYALTQGRVPIIGVGGVSSGQDALEKIRAGASLVQLYTALVFHGPPVVATVKRELEELLRAVFWLPCGQQN
SIO_010081: DHODH
subclass of: SO_0000673
so part of: DHODH
location: join(193407..193424,193669..193863,194122..194321,194542..194624,195189..195376,195843..195956,196225..196378,196452..196611,196920..196956)
location: region:193407-196956:1
so has part: feature:193407-193424:1:exon
so has part: feature:193669-193863:1:exon
so has part: feature:194122-194321:1:exon
so has part: feature:194542-194624:1:exon
so has part: feature:195189-195376:1:exon
so has part: feature:195843-195956:1:exon
so has part: feature:196225-196378:1:exon
so has part: feature:196452-196611:1:exon
so has part: feature:196920-196956:1:exon

XP_030811595.1
type: Protein
SIO_000068: ncbiprotein

position:193407:1
position: 193407
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:196956:1
position: 196956
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:193407-193424:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:193669-193863:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:194122-194321:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:194542-194624:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:195189-195376:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:195843-195956:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:196225-196378:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:196452-196611:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:196920-196956:1:exon

DHODH
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 87175
gene: DHODH
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: dihydroorotate dehydrogenase (quinone), mitochondrial isoform X1
translation: MAAPLRGRLRALVLGGCGLLLGSALAAGDERLYAAVMPALRALPPEAAHGLALRAAALGLLPSTRPDSPALEVRVFGQRFRNPLGLAAGFDKQCEAVDGLYKMGFGFVEVGTVTPRPQEGNPKPRVFRLAEDEAVINRYGFNSHGHVVVERRLRARQETQIRLTAAGMPLGVNLGKNKSSTDAAADYVAGVRTLGPLADYLVVNVSSPNTPGLRDLQGKAELRDLLSKVLVERDLLPCKQKPALLVKIAPDLTAQDKQDIASVVCELGVDGLIVSNTTVSRPSSLRSRQGTEPGGLSGKPLRELSTQTIRDMYALTQGRVPIIGVGGVSSGQDALEKIRAGASLVQLYTALVFHGPPVVATVKRELEELLREQGFKNIMEAVGADHRC
SIO_010081: DHODH
subclass of: SO_0000673
so part of: DHODH
location: join(193407..193424,193669..193863,194122..194321,194542..194624,195189..195376,195843..195956,196225..196378,196452..196611,196730..196784)
location: region:193407-196784:1
so has part: feature:193407-193424:1:exon
so has part: feature:193669-193863:1:exon
so has part: feature:194122-194321:1:exon
so has part: feature:194542-194624:1:exon
so has part: feature:195189-195376:1:exon
so has part: feature:195843-195956:1:exon
so has part: feature:196225-196378:1:exon
so has part: feature:196452-196611:1:exon
so has part: feature:196730-196784:1:exon

XP_030811594.1
type: Protein
SIO_000068: ncbiprotein

position:196784:1
position: 196784
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:193407-193424:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:193669-193863:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:194122-194321:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:194542-194624:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:195189-195376:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:195843-195956:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:196225-196378:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:196452-196611:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:196730-196784:1:exon

DHX38
type: Gene
subclass of: SO_0000704
RO_0002162: 87175
gene: DHX38
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 197860..207385
location: region:197860-207385:1
so has part: feature:197860-207385:1:exon
subclass of: SO_0000010

115907698
type: Gene
SIO_000068: ncbigene

position:197860:1
position: 197860
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:207385:1
position: 207385
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:197860-207385:1:exon

DHX38
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 87175
gene: DHX38
product: DEAH-box helicase 38
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 mRNAs, 10 ESTs, 21 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
transcript id: XM_030955725.1
SIO_010081: DHX38
subclass of: SO_0000673
so part of: DHX38
location: join(197860..198332,198562..198749,198893..198994,199412..199577,199686..199804,199915..199991,200079..200234,200853..201014,201100..201207,202089..202201,202304..202441,202661..202847,202937..203122,203540..203680,203859..203969,204042..204158,204394..204501,204617..204729,205208..205416,205502..205656,205736..205891,205967..206101,206180..206305,206687..206782,206926..207047,207153..207385)
location: region:197860-207385:1
so has part: feature:197860-198332:1:exon
so has part: feature:198562-198749:1:exon
so has part: feature:198893-198994:1:exon
so has part: feature:199412-199577:1:exon
so has part: feature:199686-199804:1:exon
so has part: feature:199915-199991:1:exon
so has part: feature:200079-200234:1:exon
so has part: feature:200853-201014:1:exon
so has part: feature:201100-201207:1:exon
so has part: feature:202089-202201:1:exon
so has part: feature:202304-202441:1:exon
so has part: feature:202661-202847:1:exon
so has part: feature:202937-203122:1:exon
so has part: feature:203540-203680:1:exon
so has part: feature:203859-203969:1:exon
so has part: feature:204042-204158:1:exon
so has part: feature:204394-204501:1:exon
so has part: feature:204617-204729:1:exon
so has part: feature:205208-205416:1:exon
so has part: feature:205502-205656:1:exon
so has part: feature:205736-205891:1:exon
so has part: feature:205967-206101:1:exon
so has part: feature:206180-206305:1:exon
so has part: feature:206687-206782:1:exon
so has part: feature:206926-207047:1:exon
so has part: feature:207153-207385:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:197860-198332:1:exon

position:198332:1
position: 198332
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:198562-198749:1:exon

position:198562:1
position: 198562
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:198749:1
position: 198749
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:198893-198994:1:exon

position:198893:1
position: 198893
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:198994:1
position: 198994
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:199412-199577:1:exon

position:199412:1
position: 199412
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:199577:1
position: 199577
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:199686-199804:1:exon

position:199686:1
position: 199686
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:199804:1
position: 199804
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:199915-199991:1:exon

position:199915:1
position: 199915
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:199991:1
position: 199991
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:200079-200234:1:exon

position:200079:1
position: 200079
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:200234:1
position: 200234
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:200853-201014:1:exon

position:200853:1
position: 200853
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:201014:1
position: 201014
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:201100-201207:1:exon

position:201100:1
position: 201100
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:201207:1
position: 201207
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:202089-202201:1:exon

position:202089:1
position: 202089
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:202201:1
position: 202201
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:202304-202441:1:exon

position:202304:1
position: 202304
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:202441:1
position: 202441
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:202661-202847:1:exon

position:202661:1
position: 202661
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:202847:1
position: 202847
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:202937-203122:1:exon

position:202937:1
position: 202937
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:203122:1
position: 203122
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:203540-203680:1:exon

position:203540:1
position: 203540
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:203680:1
position: 203680
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:203859-203969:1:exon

position:203859:1
position: 203859
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:203969:1
position: 203969
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:204042-204158:1:exon

position:204042:1
position: 204042
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:204158:1
position: 204158
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:204394-204501:1:exon

position:204394:1
position: 204394
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:204501:1
position: 204501
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:204617-204729:1:exon

position:204617:1
position: 204617
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:204729:1
position: 204729
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:205208-205416:1:exon

position:205208:1
position: 205208
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:205416:1
position: 205416
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:205502-205656:1:exon

position:205502:1
position: 205502
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:205656:1
position: 205656
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:205736-205891:1:exon

position:205736:1
position: 205736
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:205891:1
position: 205891
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 22
SIO_000628: feature:205967-206101:1:exon

position:205967:1
position: 205967
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:206101:1
position: 206101
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 23
SIO_000628: feature:206180-206305:1:exon

position:206180:1
position: 206180
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:206305:1
position: 206305
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 24
SIO_000628: feature:206687-206782:1:exon

position:206687:1
position: 206687
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:206782:1
position: 206782
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 25
SIO_000628: feature:206926-207047:1:exon

position:206926:1
position: 206926
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:207047:1
position: 207047
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 26
SIO_000628: feature:207153-207385:1:exon

position:207153:1
position: 207153
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

DHX38
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 87175
gene: DHX38
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: pre-mRNA-splicing factor ATP-dependent RNA helicase PRP16
translation: MEAGEESLHRLSGTGPSGEAGGLVLRARGAEQHVFKAPAPRVSLLGLDVLAAQKRRERQEEAAGGKRSRVASYKDWEEGRDEVGSAEEEEEDEANRSDRRARRNRHYRSVHVETPSYTGGVSEEFLERSRQRERERREHGVFASSKEEKERKKERSRDRDHDRKRDREERDRSHHSRSERDGSSERSSRRSEPESPRHRPKDAATPSRSSWEEDDGGYSSAHRSQWESPSPSPSYRDSERGHRLPSLRDTDRRERDRSVRGRYSDKTPLPTPSYKYNEWADDRKHLGATPRLSRGRGRRTEGEEGIAFETEEERQQWEDDQRQADRDWYMMDEGYDEFHNPLAYSSEEYVKKREQHLHKQRQKRISAQRRQINEDNERWETNRMLTSGVVHRIEVDEDFEEDNSAKVHLLVHNLVPPFLDGRIVFTKQPEPVIPVKDATSDLAIIARKGSQLVRKHREQKERKRAQHKHWELAGTKLGDIMGIKKEEEKDEMVTEDGKVDYKTEQKFAEHMKEKSEASSEFAKKKSILEQRQYLPIFAVQQELLSILRDNSIVIVVGETGSGKTTQLTQYLHEDGYTDYGMIGCTQPRRVAAMSVAKRVSEEMGVRLGEEVGYAIRFEDCTSENTVIKYMTDGILLRESPREADLDNYSAIIMDEAHERSLNTDVLFGLLREVVARRSDLKLVVTSATMDADKFASFFGNVPIFHIPGRTFPVDILFSKTPQEDYVEAAVKQALQVHLSGAPGDILVFMPGQEDIEVTSEQIVEHLEELEKAPALAVLPIYSQLPSDLQAKIFQKAPDGVRKCIVATNIAETSLTVDGIMFVIDSGYCKLKVFNPRIGMDALQIYPISQANANQRAGRAGRTGPGHCFRLYTQSAYKNELLTTTVPEIQRTNLANVVLLLKSLGVQDLLQFHFMDPPPEDNMLNSMYQLWILGALDNTGGLTSTGRLMVEFPLDPALSKMLIVSCDMGCSSEILLVVSMLSVPAIFYRPKGREEESDQVREKFAVPESDHLTYLNVYLQWKNNSYSTLWCNQHFIHAKAMRKVREVRAQLKDIMVQQRMSLASCGTDWDVVRKCICAAYFHQAAKLKGIGEYVNIRTGMPCHLHPTSSLFGMGYTPDYIVYHELVMTTKEYMQCVTAVDGEWLAELGPMFYSIKHAGKSRQENRRRAKEEVSAMEEEMALAEEQLRARREEQERRNPLGSARSTKIYTPGRKEQGEALTPRRTPARFGL
SIO_010081: DHX38
subclass of: SO_0000673
so part of: DHX38
location: join(198019..198332,198562..198749,198893..198994,199412..199577,199686..199804,199915..199991,200079..200234,200853..201014,201100..201207,202089..202201,202304..202441,202661..202847,202937..203122,203540..203680,203859..203969,204042..204158,204394..204501,204617..204729,205208..205416,205502..205656,205736..205891,205967..206101,206180..206305,206687..206782,206926..207047,207153..207237)
location: region:198019-207237:1
so has part: feature:198019-198332:1:exon
so has part: feature:198562-198749:1:exon
so has part: feature:198893-198994:1:exon
so has part: feature:199412-199577:1:exon
so has part: feature:199686-199804:1:exon
so has part: feature:199915-199991:1:exon
so has part: feature:200079-200234:1:exon
so has part: feature:200853-201014:1:exon
so has part: feature:201100-201207:1:exon
so has part: feature:202089-202201:1:exon
so has part: feature:202304-202441:1:exon
so has part: feature:202661-202847:1:exon
so has part: feature:202937-203122:1:exon
so has part: feature:203540-203680:1:exon
so has part: feature:203859-203969:1:exon
so has part: feature:204042-204158:1:exon
so has part: feature:204394-204501:1:exon
so has part: feature:204617-204729:1:exon
so has part: feature:205208-205416:1:exon
so has part: feature:205502-205656:1:exon
so has part: feature:205736-205891:1:exon
so has part: feature:205967-206101:1:exon
so has part: feature:206180-206305:1:exon
so has part: feature:206687-206782:1:exon
so has part: feature:206926-207047:1:exon
so has part: feature:207153-207237:1:exon

XP_030811585.1
type: Protein
SIO_000068: ncbiprotein

position:198019:1
position: 198019
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:207237:1
position: 207237
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:198019-198332:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:198562-198749:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:198893-198994:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:199412-199577:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:199686-199804:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:199915-199991:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:200079-200234:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:200853-201014:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:201100-201207:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:202089-202201:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:202304-202441:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:202661-202847:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:202937-203122:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:203540-203680:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:203859-203969:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:204042-204158:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:204394-204501:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:204617-204729:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:205208-205416:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:205502-205656:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:205736-205891:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:205967-206101:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:206180-206305:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:206687-206782:1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:206926-207047:1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:207153-207237:1:exon

LOC115907706
type: Gene
subclass of: SO_0000704
RO_0002162: 87175
gene: LOC115907706
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(207120..290820)
location: region:207120-290820:-1
so has part: feature:207120-290820:-1:exon
subclass of: SO_0000010

115907706
type: Gene
SIO_000068: ncbigene

position:207120:-1
position: 207120
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:290820:-1
position: 290820
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:207120-290820:-1:exon

LOC115907706
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 87175
gene: LOC115907706
product: uncharacterized LOC115907706
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_030955737.1
SIO_010081: LOC115907706
subclass of: SO_0000673
so part of: LOC115907706
location: complement(join(207120..207524,208079..208241,208348..208512,223814..223958,241674..241741,290568..290820))
location: region:207120-290820:-1
so has part: feature:290568-290820:-1:exon
so has part: feature:241674-241741:-1:exon
so has part: feature:223814-223958:-1:exon
so has part: feature:208348-208512:-1:exon
so has part: feature:208079-208241:-1:exon
so has part: feature:207120-207524:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:290568-290820:-1:exon

position:290568:-1
position: 290568
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:241674-241741:-1:exon

position:241674:-1
position: 241674
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:241741:-1
position: 241741
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:223814-223958:-1:exon

position:223814:-1
position: 223814
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:223958:-1
position: 223958
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:208348-208512:-1:exon

position:208348:-1
position: 208348
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:208512:-1
position: 208512
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:208079-208241:-1:exon

position:208079:-1
position: 208079
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:208241:-1
position: 208241
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:207120-207524:-1:exon

position:207524:-1
position: 207524
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC115907706
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 87175
gene: LOC115907706
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: uncharacterized protein LOC115907706
translation: MGEQGPGETWPRHTAEQCPSLAQRPVPTEHLAGSSAAQTTWMLKSRGSINCRPSRGRGRQTWSRNAARAAAQPGPGGQPPATEGSLEQLGAQKQSQGLQYSPARLQEQLGATQAQEQQSLQQLSRTNEAIQGLHRKVAELQQQLCWQVQDMENLQAELAQAWQESTKQAEKIAAYKTHRQQLYREPRRMQTFKEQTGGSTGQQPDSTSPA
SIO_010081: LOC115907706
subclass of: SO_0000673
so part of: LOC115907706
location: complement(join(207484..207524,208079..208241,208348..208512,223814..223958,241674..241741,290568..290618))
location: region:207484-290618:-1
so has part: feature:290568-290618:-1:exon
so has part: feature:241674-241741:-1:exon
so has part: feature:223814-223958:-1:exon
so has part: feature:208348-208512:-1:exon
so has part: feature:208079-208241:-1:exon
so has part: feature:207484-207524:-1:exon

XP_030811597.1
type: Protein
SIO_000068: ncbiprotein

position:207484:-1
position: 207484
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:290618:-1
position: 290618
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:290568-290618:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:241674-241741:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:223814-223958:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:208348-208512:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:208079-208241:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:207484-207524:-1:exon

ZFHX3
type: Gene
subclass of: SO_0000704
RO_0002162: 87175
gene: ZFHX3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(304143..385962)
location: region:304143-385962:-1
so has part: feature:304143-385962:-1:exon
subclass of: SO_0000010

115907962
type: Gene
SIO_000068: ncbigene

position:304143:-1
position: 304143
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:385962:-1
position: 385962
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:304143-385962:-1:exon

ZFHX3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 87175
gene: ZFHX3
product: zinc finger homeobox 3
exception: unclassified transcription discrepancy
note: The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: inserted 2 bases in 1 codon; deleted 2 bases in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 25 ESTs, 10 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
transcript id: XM_030956206.1
SIO_010081: ZFHX3
subclass of: SO_0000673
so part of: ZFHX3
location: complement(join(304143..307367,310067..315520,316008..316113,323467..323667,323858..323991,332438..332545,358470..358701,380822..381318,383265..385962))
location: region:304143-385962:-1
so has part: feature:383265-385962:-1:exon
so has part: feature:380822-381318:-1:exon
so has part: feature:358470-358701:-1:exon
so has part: feature:332438-332545:-1:exon
so has part: feature:323858-323991:-1:exon
so has part: feature:323467-323667:-1:exon
so has part: feature:316008-316113:-1:exon
so has part: feature:310067-315520:-1:exon
so has part: feature:304143-307367:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:383265-385962:-1:exon

position:383265:-1
position: 383265
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:380822-381318:-1:exon

position:380822:-1
position: 380822
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:381318:-1
position: 381318
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:358470-358701:-1:exon

position:358470:-1
position: 358470
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:358701:-1
position: 358701
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:332438-332545:-1:exon

position:332438:-1
position: 332438
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:332545:-1
position: 332545
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:323858-323991:-1:exon

position:323858:-1
position: 323858
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:323991:-1
position: 323991
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:323467-323667:-1:exon

position:323467:-1
position: 323467
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:323667:-1
position: 323667
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:316008-316113:-1:exon

position:316008:-1
position: 316008
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:316113:-1
position: 316113
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:310067-315520:-1:exon

position:310067:-1
position: 310067
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:315520:-1
position: 315520
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:304143-307367:-1:exon

position:307367:-1
position: 307367
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

ZFHX3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 87175
gene: ZFHX3
exception: unclassified translation discrepancy
note: The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: inserted 2 bases in 1 codon; deleted 2 bases in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: LOW QUALITY PROTEIN: zinc finger homeobox protein 3
translation: MEGCDSPVIPGKDNGCGIPQHQQWTDLNSAHLPEPAGSMEQPAAESCSPLDSLRVPFPERGAESSAAGPGAEPAGKEVSCGQCAASFAGLQSYMEHRCAGARPAPALRADSGSDTSEDGEEESDVENLAGEIVYQPDGSAYIVESLSQLVQSGAAGGSGTLPSLLPNSLPKQGDPSAAAPVYPQIINTFHIASSFGKWFEGSDQTFPNTSALAGISPVLHSFRVFDVRHKSNKDYLNSDGSAKSSCVSKDVPNNVDLSKFDGFVLYGKRKPILMCFLCKLSFGYVRSFVTHAVHDHRMTLSEEERKILSNKNISAIIQGIGKDKEPLVSFLEPKNKTFQHPLVSAANLIGPGHSFYGKFSGICMEGEQALQAGAAGGAEPPPAAGVLAPGALLNLGGLTSSALKTPITSVPLGPLASSPTKSSEGKDPGVAGGEKQEGDDQDSLSEKVEPAEEVEEEEEEEVEEEEEEEEEEEEEEDEDDEGCKGLFPNELEDELEDRPQEDVGAVAGSGSSKKDLALSNQSISNSPLMPNVLQTLSRGTASTSSNSASSFVFDGANRRNHLSFNNEGGGASVAEGSRRLDFIDESANKDNATAPEPNESAEGEDGSYISHHQHAGPLCELGGGECPSGSGVECPKCDTVLGSSRSLGGHMTMMHSRNSCKTLKCPKCNWHYKYQQTLEAHMKEKHPEPGGSCVYCKSGQPHPRLARGESYTCGYKPFRCEVCNYSTTTKGNLSIHMQSDKHLNNMQNLQNGGGEQVFSHTAGAAAAAAAAAAAAAANIGSTCGAPSPTKPKTKPTWRCEVCDYETNVARNLRIHMTSEKHMHNMMLLQQNMSQIQHNRHLGLGSLPSPAEAELYQYYLAQNMNLPNLKMDSTSSDAQFMMGGFQLDPTNPMATMAPSLVGGEIPLDMRLGGGQLVSEELMNLGESFTQTNDPSLKLFQCAVCNKFSTDNLDMLGLHMNVERSLPEDEWKAVMGDSYQCKLCRYNTQLKANFQLHCKTDKHVQKYQLVAHIKEGGKANEWRLKCVAIGNPVHLKCNACDYYTNSLEKLRLHTVNSRHEASLKLYKHLQHHESGVEGESCYYHCVLCNYSTKAKLNLIQHVRSMKHQRSESLRKLQRLQKGLPEEEEDLGQIFTIRKCPAAEAEEPSEDVEGPNETAGDAEEPAKEQDSAGDKDQSKWTAPASQPEKELTEPPAPSKRISFPSSSESPLSFKWSKTSEETKSEQMYQCPYCKYSNTDVNRLRVHAMTQHSVQPMLRCPLCQDMLNNKIHLQLHLTHLHSVSPDCVEKLIMTVTTPEVMMPSSMFLPAAAPEKDGNSGAEEREGKQSEISEDVGKTLLSSDSAEHSGDPKPAPADPSAAREDSGFLCWKKGCSQVFKSSAALQTHFNDIHAKRPQLPVSDRHVYKYRCNQCSLAFKTIEKLQLHSQYHVIRAATMCCLCQRSFRTFQALKKHLETSHLELSEADIQQLYGGLLVNGDLLAMGDPSLAEDHTIIVEEDKEEESDLEDKQSPTGSDSGSVQEDSGSEPKRALPFRKGPNFTMEKFLDPSRPYKCTVCKESFTQKNILLVHYNSVSHLHKLKRALQESATGQPEPTSSPDNKPFKCNTCNVAYSQSSTLEIHMRSVLHQTKARAAKLEAASSSSNGAGNSSSSSSLSLGSSTPSPVSASNSNAFATTSTSTSGTAPIPSLLNQVSSDSVGIPALGNTVSTNISSPAEPKEVNRKKLADMIASRQQQQQQQQQQQQQQQQQAQTLAQAQVQAHLQQELQQQAALLQSQLFNPALLPHFPMTTETLLQLQQQQQHLLFPFYIPSAEFQLNPEVSLPVTSGALTLTGTGPSLLEDLKAQVQLPQQSHPQLLQQQQGQLSLSQPHSVLLQQSQHPEKKNKSIVKEKDKETPRERESAERGDNNVTLKESLPDNLKPKEKKDFVPGSSSEPSILPPRIASDARGNATKALLENFGFELVIQYNENKQKGQKKNGRTEQGENLEKLECDTCGKFFSNILIL…
SIO_010081: ZFHX3
subclass of: SO_0000673
so part of: ZFHX3
location: complement(join(305776..307367,310067..315520,316008..316113,323467..323667,323858..323991,332438..332545,358470..358701,380822..381318,383265..385962))
location: region:305776-385962:-1
so has part: feature:383265-385962:-1:exon
so has part: feature:380822-381318:-1:exon
so has part: feature:358470-358701:-1:exon
so has part: feature:332438-332545:-1:exon
so has part: feature:323858-323991:-1:exon
so has part: feature:323467-323667:-1:exon
so has part: feature:316008-316113:-1:exon
so has part: feature:310067-315520:-1:exon
so has part: feature:305776-307367:-1:exon

XP_030812066.1
type: Protein
SIO_000068: ncbiprotein

position:305776:-1
position: 305776
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:383265-385962:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:380822-381318:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:358470-358701:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:332438-332545:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:323858-323991:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:323467-323667:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:316008-316113:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:310067-315520:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:305776-307367:-1:exon

LOC115907963
type: Gene
subclass of: SO_0000704
RO_0002162: 87175
gene: LOC115907963
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(427812..687823)
location: region:427812-687823:-1
so has part: feature:427812-687823:-1:exon
subclass of: SO_0000011

115907963
type: Gene
SIO_000068: ncbigene

position:427812:-1
position: 427812
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:687823:-1
position: 687823
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:427812-687823:-1:exon

LOC115907963
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 87175
nc RNA class: lncRNA
gene: LOC115907963
product: uncharacterized LOC115907963
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XR_004061083.1
SIO_010081: LOC115907963
subclass of: SO_0000673
so part of: LOC115907963
location: complement(join(427812..427880,442660..442970,495106..495215,615876..615980,687697..687823))
location: region:427812-687823:-1
so has part: feature:687697-687823:-1:exon
so has part: feature:615876-615980:-1:exon
so has part: feature:495106-495215:-1:exon
so has part: feature:442660-442970:-1:exon
so has part: feature:427812-427880:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:687697-687823:-1:exon

position:687697:-1
position: 687697
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:615876-615980:-1:exon

position:615876:-1
position: 615876
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:615980:-1
position: 615980
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:495106-495215:-1:exon

position:495106:-1
position: 495106
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:495215:-1
position: 495215
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:442660-442970:-1:exon

position:442660:-1
position: 442660
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:442970:-1
position: 442970
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:427812-427880:-1:exon

position:427880:-1
position: 427880
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

PSMD7
type: Gene
subclass of: SO_0000704
RO_0002162: 87175
gene: PSMD7
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 786892..790199
location: region:786892-790199:1
so has part: feature:786892-790199:1:exon
subclass of: SO_0000010

115907734
type: Gene
SIO_000068: ncbigene

position:786892:1
position: 786892
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:790199:1
position: 790199
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:786892-790199:1:exon

PSMD7
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 87175
gene: PSMD7
product: proteasome 26S subunit, non-ATPase 7
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 7 mRNAs, 41 ESTs, 15 Proteins, and 92% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
transcript id: XM_030955801.1
SIO_010081: PSMD7
subclass of: SO_0000673
so part of: PSMD7
location: join(786892..787083,787568..787659,787916..788008,788482..788579,788859..788939,789475..789566,789715..790199)
location: region:786892-790199:1
so has part: feature:786892-787083:1:exon
so has part: feature:787568-787659:1:exon
so has part: feature:787916-788008:1:exon
so has part: feature:788482-788579:1:exon
so has part: feature:788859-788939:1:exon
so has part: feature:789475-789566:1:exon
so has part: feature:789715-790199:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:786892-787083:1:exon

position:787083:1
position: 787083
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:787568-787659:1:exon

position:787568:1
position: 787568
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:787659:1
position: 787659
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:787916-788008:1:exon

position:787916:1
position: 787916
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:788008:1
position: 788008
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:788482-788579:1:exon

position:788482:1
position: 788482
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:788579:1
position: 788579
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:788859-788939:1:exon

position:788859:1
position: 788859
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:788939:1
position: 788939
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:789475-789566:1:exon

position:789475:1
position: 789475
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:789566:1
position: 789566
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:789715-790199:1:exon

position:789715:1
position: 789715
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

PSMD7
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 87175
gene: PSMD7
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: 26S proteasome non-ATPase regulatory subunit 7
translation: MPELAVDRVVVHPLVLLSVVDHFNRIGKVGNQKRVVGVLLGSWQKKILDVSNSFAVPFDEDDKDDTVWFLDHDYLENMYGMFKKVNARERIVGWYHTGPKLHKNDIAINELMKRYCPNSVLVIIDVKPKDLGLPTEAYISVEEVHDDGTPTSKTFEHVTSEIGAEEAEEVGVEHLLRDIKDTTVGTLSQRITNQVHGLKGLNSKLLDIRSYLEKVALGKLPINHQIIYHLQDVFNLLPDVNLQEFVKAFYLKTNDQMVVVYLASLIRSVVALHNLINNKIANRDAEKKEGQEKEESKKERKDEKEKDKEKSDGKKEEKKEKK
SIO_010081: PSMD7
subclass of: SO_0000673
so part of: PSMD7
location: join(787010..787083,787568..787659,787916..788008,788482..788579,788859..788939,789475..789566,789715..790153)
location: region:787010-790153:1
so has part: feature:787010-787083:1:exon
so has part: feature:787568-787659:1:exon
so has part: feature:787916-788008:1:exon
so has part: feature:788482-788579:1:exon
so has part: feature:788859-788939:1:exon
so has part: feature:789475-789566:1:exon
so has part: feature:789715-790153:1:exon

XP_030811661.1
type: Protein
SIO_000068: ncbiprotein

position:787010:1
position: 787010
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:790153:1
position: 790153
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:787010-787083:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:787568-787659:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:787916-788008:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:788482-788579:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:788859-788939:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:789475-789566:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:789715-790153:1:exon

WWP2
type: Gene
subclass of: SO_0000704
RO_0002162: 87175
gene: WWP2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(790897..821764)
location: region:790897-821764:-1
so has part: feature:790897-821764:-1:exon
subclass of: SO_0000010

115907825
type: Gene
SIO_000068: ncbigene

position:790897:-1
position: 790897
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:821764:-1
position: 821764
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:790897-821764:-1:exon

WWP2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 87175
gene: WWP2
product: WW domain containing E3 ubiquitin protein ligase 2, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 ESTs, 30 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XM_030955991.1
SIO_010081: WWP2
subclass of: SO_0000673
so part of: WWP2
location: complement(join(790897..791891,792020..792092,792862..792958,793056..793160,793438..793558,794085..794225,794322..794455,795453..795612,796640..796728,796810..796881,796994..797072,797222..797350,797612..797693,799168..799222,802321..802495,802788..802877,806988..807204,808091..808326,812653..812749,813429..813575,818698..818816,819083..819230,819742..819825,821708..821764))
location: region:790897-821764:-1
so has part: feature:821708-821764:-1:exon
so has part: feature:819742-819825:-1:exon
so has part: feature:819083-819230:-1:exon
so has part: feature:818698-818816:-1:exon
so has part: feature:813429-813575:-1:exon
so has part: feature:812653-812749:-1:exon
so has part: feature:808091-808326:-1:exon
so has part: feature:806988-807204:-1:exon
so has part: feature:802788-802877:-1:exon
so has part: feature:802321-802495:-1:exon
so has part: feature:799168-799222:-1:exon
so has part: feature:797612-797693:-1:exon
so has part: feature:797222-797350:-1:exon
so has part: feature:796994-797072:-1:exon
so has part: feature:796810-796881:-1:exon
so has part: feature:796640-796728:-1:exon
so has part: feature:795453-795612:-1:exon
so has part: feature:794322-794455:-1:exon
so has part: feature:794085-794225:-1:exon
so has part: feature:793438-793558:-1:exon
so has part: feature:793056-793160:-1:exon
so has part: feature:792862-792958:-1:exon
so has part: feature:792020-792092:-1:exon
so has part: feature:790897-791891:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:821708-821764:-1:exon

position:821708:-1
position: 821708
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:819742-819825:-1:exon

position:819742:-1
position: 819742
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:819825:-1
position: 819825
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:819083-819230:-1:exon

position:819083:-1
position: 819083
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:819230:-1
position: 819230
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:818698-818816:-1:exon

position:818698:-1
position: 818698
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:818816:-1
position: 818816
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:813429-813575:-1:exon

position:813429:-1
position: 813429
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:813575:-1
position: 813575
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:812653-812749:-1:exon

position:812653:-1
position: 812653
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:812749:-1
position: 812749
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:808091-808326:-1:exon

position:808091:-1
position: 808091
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:808326:-1
position: 808326
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:806988-807204:-1:exon

position:806988:-1
position: 806988
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:807204:-1
position: 807204
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:802788-802877:-1:exon

position:802788:-1
position: 802788
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:802877:-1
position: 802877
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:802321-802495:-1:exon

position:802321:-1
position: 802321
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:802495:-1
position: 802495
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:799168-799222:-1:exon

position:799168:-1
position: 799168
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:799222:-1
position: 799222
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:797612-797693:-1:exon

position:797612:-1
position: 797612
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:797693:-1
position: 797693
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:797222-797350:-1:exon

position:797222:-1
position: 797222
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:797350:-1
position: 797350
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:796994-797072:-1:exon

position:796994:-1
position: 796994
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:797072:-1
position: 797072
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:796810-796881:-1:exon

position:796810:-1
position: 796810
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:796881:-1
position: 796881
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:796640-796728:-1:exon

position:796640:-1
position: 796640
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:796728:-1
position: 796728
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:795453-795612:-1:exon

position:795453:-1
position: 795453
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:795612:-1
position: 795612
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:794322-794455:-1:exon

position:794322:-1
position: 794322
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:794455:-1
position: 794455
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:794085-794225:-1:exon

position:794085:-1
position: 794085
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:794225:-1
position: 794225
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:793438-793558:-1:exon

position:793438:-1
position: 793438
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:793558:-1
position: 793558
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:793056-793160:-1:exon

position:793056:-1
position: 793056
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:793160:-1
position: 793160
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 22
SIO_000628: feature:792862-792958:-1:exon

position:792862:-1
position: 792862
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:792958:-1
position: 792958
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 23
SIO_000628: feature:792020-792092:-1:exon

position:792020:-1
position: 792020
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:792092:-1
position: 792092
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 24
SIO_000628: feature:790897-791891:-1:exon

position:791891:-1
position: 791891
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

WWP2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 87175
gene: WWP2
product: WW domain containing E3 ubiquitin protein ligase 2, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 ESTs, 27 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_030955992.1
SIO_010081: WWP2
subclass of: SO_0000673
so part of: WWP2
location: complement(join(790897..791891,792020..792092,792862..792958,793056..793160,793438..793558,794085..794225,794322..794455,795453..795612,796640..796728,796810..796881,796994..797072,797222..797350,797612..797693,799168..799222,802321..802495,802788..802877,808091..808326,812653..812749,813429..813575,818698..818816,819083..819103))
location: region:790897-819103:-1
so has part: feature:819083-819103:-1:exon
so has part: feature:818698-818816:-1:exon
so has part: feature:813429-813575:-1:exon
so has part: feature:812653-812749:-1:exon
so has part: feature:808091-808326:-1:exon
so has part: feature:802788-802877:-1:exon
so has part: feature:802321-802495:-1:exon
so has part: feature:799168-799222:-1:exon
so has part: feature:797612-797693:-1:exon
so has part: feature:797222-797350:-1:exon
so has part: feature:796994-797072:-1:exon
so has part: feature:796810-796881:-1:exon
so has part: feature:796640-796728:-1:exon
so has part: feature:795453-795612:-1:exon
so has part: feature:794322-794455:-1:exon
so has part: feature:794085-794225:-1:exon
so has part: feature:793438-793558:-1:exon
so has part: feature:793056-793160:-1:exon
so has part: feature:792862-792958:-1:exon
so has part: feature:792020-792092:-1:exon
so has part: feature:790897-791891:-1:exon

position:819103:-1
position: 819103
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:819083-819103:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:818698-818816:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:813429-813575:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:812653-812749:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:808091-808326:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:802788-802877:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:802321-802495:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:799168-799222:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:797612-797693:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:797222-797350:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:796994-797072:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:796810-796881:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:796640-796728:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:795453-795612:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:794322-794455:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:794085-794225:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:793438-793558:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:793056-793160:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:792862-792958:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:792020-792092:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:790897-791891:-1:exon

WWP2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 87175
gene: WWP2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: NEDD4-like E3 ubiquitin-protein ligase WWP2 isoform X1
translation: MAAASSSRARAGPPCEKSPLSVKVVSVKPKAQSRPARMNCYVEVAGDGLPSETKKTGKQMGVSELLWNEILTLNVTAQSHLELKVWICHTLRNELLGAASVSLGSLLKGGGKLENRQLTLDLQTENKGSVVSGGELTVFLDGPAVALGSVPVVPDGSAGSEGSQGPGRDPSSTAVGTEGRHQPPSTNCFGNRPRTHRHAAGAARGNAGSGEQSPSARSRHRQQTKSSQHTSTATSMANGVANGVATSTANGVANGTATSTANGTATSMANGTVNGDAVAAVDMDEDRPAAGASVPTPVASGPAEGSSAPAPPALSGSREAEEAASGPSAPPARAAVLALDALPPGWEQRELPNGRVYYVDHNNKTTTWERPLPPGWEKRVDPRGRYYYVDHNTRTTTWQRPTAEYVRNYEQWQSQRNQLQGAMQHFSQRFLYQSSGAPSDNDPLGPLPPGWEKRQDNGRVYYVNHNTRTTQWEDPRTQGMIQEPPLPPGWEMKYTNESVRYFVDHNTRTTTFKDPRPGFESGSKHGGSPGAYDRSFRWKYHQFRFLCHSNALPSHVKISVSRQTLFEDSFQQIMNMKPYDLRRRLYIIMRGEEGLDYGGIAREWFFLLSHEVLNPMYCLFEYAGKNNYCLQINPASSINPDHLTYFRFIGRFIAMALYHGKFIDTGFTLPFYKRMLNKRPTLKDLESIDPEFYNSIVWTKENSLEECGLELYFIQDMEILGKVTTHELKEGGESIRVTEENKEEYIMLLTDWRFTRGVEEQTKAFLDGFNEVVPLEWLRYFDEKELELMLCGMQEIDMNDWQKNTIYRHYTKNSKQIQWFWQVVKEMDNEKRIRLLQFVTGTCRLPVGGFAELIGSNGPQKFCIDKVGKETWLPRSHTCFNRLDLPPYKSYEQLKEKLLYAIEETEGFGQE
SIO_010081: WWP2
subclass of: SO_0000673
so part of: WWP2
location: complement(join(791792..791891,792020..792092,792862..792958,793056..793160,793438..793558,794085..794225,794322..794455,795453..795612,796640..796728,796810..796881,796994..797072,797222..797350,797612..797693,799168..799222,802321..802495,802788..802877,806988..807204,808091..808326,812653..812749,813429..813575,818698..818816,819083..819230,819742..819811))
location: region:791792-819811:-1
so has part: feature:819742-819811:-1:exon
so has part: feature:819083-819230:-1:exon
so has part: feature:818698-818816:-1:exon
so has part: feature:813429-813575:-1:exon
so has part: feature:812653-812749:-1:exon
so has part: feature:808091-808326:-1:exon
so has part: feature:806988-807204:-1:exon
so has part: feature:802788-802877:-1:exon
so has part: feature:802321-802495:-1:exon
so has part: feature:799168-799222:-1:exon
so has part: feature:797612-797693:-1:exon
so has part: feature:797222-797350:-1:exon
so has part: feature:796994-797072:-1:exon
so has part: feature:796810-796881:-1:exon
so has part: feature:796640-796728:-1:exon
so has part: feature:795453-795612:-1:exon
so has part: feature:794322-794455:-1:exon
so has part: feature:794085-794225:-1:exon
so has part: feature:793438-793558:-1:exon
so has part: feature:793056-793160:-1:exon
so has part: feature:792862-792958:-1:exon
so has part: feature:792020-792092:-1:exon
so has part: feature:791792-791891:-1:exon

XP_030811851.1
type: Protein
SIO_000068: ncbiprotein

position:791792:-1
position: 791792
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:819811:-1
position: 819811
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:819742-819811:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:819083-819230:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:818698-818816:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:813429-813575:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:812653-812749:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:808091-808326:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:806988-807204:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:802788-802877:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:802321-802495:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:799168-799222:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:797612-797693:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:797222-797350:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:796994-797072:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:796810-796881:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:796640-796728:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:795453-795612:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:794322-794455:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:794085-794225:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:793438-793558:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:793056-793160:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:792862-792958:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:792020-792092:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:791792-791891:-1:exon

WWP2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 87175
gene: WWP2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: NEDD4-like E3 ubiquitin-protein ligase WWP2 isoform X2
translation: MQHFSQRFLYQSSGAPSDNDPLGPLPPGWEKRQDNGRVYYVNHNTRTTQWEDPRTQGMIQEPPLPPGWEMKYTNESVRYFVDHNTRTTTFKDPRPGFESGSKHGGSPGAYDRSFRWKYHQFRFLCHSNALPSHVKISVSRQTLFEDSFQQIMNMKPYDLRRRLYIIMRGEEGLDYGGIAREWFFLLSHEVLNPMYCLFEYAGKNNYCLQINPASSINPDHLTYFRFIGRFIAMALYHGKFIDTGFTLPFYKRMLNKRPTLKDLESIDPEFYNSIVWTKENSLEECGLELYFIQDMEILGKVTTHELKEGGESIRVTEENKEEYIMLLTDWRFTRGVEEQTKAFLDGFNEVVPLEWLRYFDEKELELMLCGMQEIDMNDWQKNTIYRHYTKNSKQIQWFWQVVKEMDNEKRIRLLQFVTGTCRLPVGGFAELIGSNGPQKFCIDKVGKETWLPRSHTCFNRLDLPPYKSYEQLKEKLLYAIEETEGFGQE
SIO_010081: WWP2
subclass of: SO_0000673
so part of: WWP2
location: complement(join(791792..791891,792020..792092,792862..792958,793056..793160,793438..793558,794085..794225,794322..794455,795453..795612,796640..796728,796810..796881,796994..797072,797222..797350,797612..797693,799168..799222,802321..802353))
location: region:791792-802353:-1
so has part: feature:802321-802353:-1:exon
so has part: feature:799168-799222:-1:exon
so has part: feature:797612-797693:-1:exon
so has part: feature:797222-797350:-1:exon
so has part: feature:796994-797072:-1:exon
so has part: feature:796810-796881:-1:exon
so has part: feature:796640-796728:-1:exon
so has part: feature:795453-795612:-1:exon
so has part: feature:794322-794455:-1:exon
so has part: feature:794085-794225:-1:exon
so has part: feature:793438-793558:-1:exon
so has part: feature:793056-793160:-1:exon
so has part: feature:792862-792958:-1:exon
so has part: feature:792020-792092:-1:exon
so has part: feature:791792-791891:-1:exon

XP_030811852.1
type: Protein
SIO_000068: ncbiprotein

position:802353:-1
position: 802353
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:802321-802353:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:799168-799222:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:797612-797693:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:797222-797350:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:796994-797072:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:796810-796881:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:796640-796728:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:795453-795612:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:794322-794455:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:794085-794225:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:793438-793558:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:793056-793160:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:792862-792958:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:792020-792092:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:791792-791891:-1:exon

NOB1
type: Gene
subclass of: SO_0000704
RO_0002162: 87175
gene: NOB1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 821894..826169
location: region:821894-826169:1
so has part: feature:821894-826169:1:exon
subclass of: SO_0000010

115907780
type: Gene
SIO_000068: ncbigene

position:821894:1
position: 821894
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:826169:1
position: 826169
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:821894-826169:1:exon

NOB1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 87175
gene: NOB1
product: NIN1 (RPN12) binding protein 1 homolog, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_030955903.1
SIO_010081: NOB1
subclass of: SO_0000673
so part of: NOB1
location: join(821894..821996,822079..822211,822324..822457,822551..822622,822902..823033,823131..823343,823490..823587,823669..823813,824743..826169)
location: region:821894-826169:1
so has part: feature:821894-821996:1:exon
so has part: feature:822079-822211:1:exon
so has part: feature:822324-822457:1:exon
so has part: feature:822551-822622:1:exon
so has part: feature:822902-823033:1:exon
so has part: feature:823131-823343:1:exon
so has part: feature:823490-823587:1:exon
so has part: feature:823669-823813:1:exon
so has part: feature:824743-826169:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:821894-821996:1:exon

position:821996:1
position: 821996
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:822079-822211:1:exon

position:822079:1
position: 822079
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:822211:1
position: 822211
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:822324-822457:1:exon

position:822324:1
position: 822324
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:822457:1
position: 822457
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:822551-822622:1:exon

position:822551:1
position: 822551
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:822622:1
position: 822622
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:822902-823033:1:exon

position:822902:1
position: 822902
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:823033:1
position: 823033
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:823131-823343:1:exon

position:823131:1
position: 823131
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:823343:1
position: 823343
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:823490-823587:1:exon

position:823490:1
position: 823490
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:823587:1
position: 823587
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:823669-823813:1:exon

position:823669:1
position: 823669
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:823813:1
position: 823813
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:824743-826169:1:exon

position:824743:1
position: 824743
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

NOB1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 87175
gene: NOB1
product: NIN1 (RPN12) binding protein 1 homolog, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
transcript id: XM_030955904.1
SIO_010081: NOB1
subclass of: SO_0000673
so part of: NOB1
location: join(821894..821996,822079..822211,822324..822457,822551..822622,822902..823033,823131..823343,823490..823587,823669..823813,824766..825181)
location: region:821894-825181:1
so has part: feature:821894-821996:1:exon
so has part: feature:822079-822211:1:exon
so has part: feature:822324-822457:1:exon
so has part: feature:822551-822622:1:exon
so has part: feature:822902-823033:1:exon
so has part: feature:823131-823343:1:exon
so has part: feature:823490-823587:1:exon
so has part: feature:823669-823813:1:exon
so has part: feature:824766-825181:1:exon

position:825181:1
position: 825181
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:821894-821996:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:822079-822211:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:822324-822457:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:822551-822622:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:822902-823033:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:823131-823343:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:823490-823587:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:823669-823813:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:824766-825181:1:exon

position:824766:1
position: 824766
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

NOB1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 87175
gene: NOB1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: RNA-binding protein NOB1 isoform X1
translation: MGHADMARVPHVVADTGAFLSAAPLQDIADALYTVPEVLAEIRDRPARRRLAALPCELRVRRPRPELLRLVTEFSKKTGDYPSLSAADLQVLALTCQLQAEIDGPGCVRWEPQDKVRLSSTPRHPEAPLHLAGFHLPAKHKPAGKGPHQPSPSPAPAESDEFGSFLYWRPPLPSIEEELRELLAITSSPEPPEQHRSSADGASAGEEEEEDEESDDEGWITPSNLKEAQQDMGHFDTAPVGVQVGCVTTDFAMQNVLLQMGLHVLAVNGMLIRRARSYILRCHGCFRTTSDMTKVFCPNCGNKTLKKVAVSVSEDGSLHMHFSRNPKVLNPRGLRRPFPSPRSTRCRRRRAASTPTTRTWWRTSASRSSACPARPGRKPTCSTPTTWPGRPRSRRTTCTAGPRTCSCATPPWAPAAAASTPTPSPRSSSRGGEGGTGPARRTHLPRCAGGSARARPLPAPGHGPGHPVPAARCPESHRDW
SIO_010081: NOB1
subclass of: SO_0000673
so part of: NOB1
location: join(821919..821996,822079..822211,822324..822457,822551..822622,822902..823033,823131..823343,823490..823587,823669..823813,824743..825180)
location: region:821919-825180:1
so has part: feature:821919-821996:1:exon
so has part: feature:822079-822211:1:exon
so has part: feature:822324-822457:1:exon
so has part: feature:822551-822622:1:exon
so has part: feature:822902-823033:1:exon
so has part: feature:823131-823343:1:exon
so has part: feature:823490-823587:1:exon
so has part: feature:823669-823813:1:exon
so has part: feature:824743-825180:1:exon

XP_030811763.1
type: Protein
SIO_000068: ncbiprotein

position:821919:1
position: 821919
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:825180:1
position: 825180
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:821919-821996:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:822079-822211:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:822324-822457:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:822551-822622:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:822902-823033:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:823131-823343:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:823490-823587:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:823669-823813:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:824743-825180:1:exon

NOB1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 87175
gene: NOB1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: RNA-binding protein NOB1 isoform X2
translation: MGHADMARVPHVVADTGAFLSAAPLQDIADALYTVPEVLAEIRDRPARRRLAALPCELRVRRPRPELLRLVTEFSKKTGDYPSLSAADLQVLALTCQLQAEIDGPGCVRWEPQDKVRLSSTPRHPEAPLHLAGFHLPAKHKPAGKGPHQPSPSPAPAESDEFGSFLYWRPPLPSIEEELRELLAITSSPEPPEQHRSSADGASAGEEEEEDEESDDEGWITPSNLKEAQQDMGHFDTAPVGVQVGCVTTDFAMQNVLLQMGLHVLAVNGMLIRRARSYILRCHGCFRTTSDMTKVFCPNCGNKTLKKVAVSVSEDGSLHMHFSRNPKVLNPRGLRYPLPAPQGGKHANNPHLVEDQRFPQQRLSRKARQKTNVFDPDYLAGASPFAENDVHSRAAHLQLRDAALGAGRRRLNPNAVTKKFVKRR
SIO_010081: NOB1
subclass of: SO_0000673
so part of: NOB1
location: join(821919..821996,822079..822211,822324..822457,822551..822622,822902..823033,823131..823343,823490..823587,823669..823813,824766..825035)
location: region:821919-825035:1
so has part: feature:821919-821996:1:exon
so has part: feature:822079-822211:1:exon
so has part: feature:822324-822457:1:exon
so has part: feature:822551-822622:1:exon
so has part: feature:822902-823033:1:exon
so has part: feature:823131-823343:1:exon
so has part: feature:823490-823587:1:exon
so has part: feature:823669-823813:1:exon
so has part: feature:824766-825035:1:exon

XP_030811764.1
type: Protein
SIO_000068: ncbiprotein

position:825035:1
position: 825035
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:821919-821996:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:822079-822211:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:822324-822457:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:822551-822622:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:822902-823033:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:823131-823343:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:823490-823587:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:823669-823813:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:824766-825035:1:exon

NFAT5
type: Gene
subclass of: SO_0000704
RO_0002162: 87175
gene: NFAT5
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(827104..880200)
location: region:827104-880200:-1
so has part: feature:827104-880200:-1:exon
subclass of: SO_0000010

115907693
type: Gene
SIO_000068: ncbigene

position:827104:-1
position: 827104
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:880200:-1
position: 880200
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:827104-880200:-1:exon

NFAT5
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 87175
gene: NFAT5
product: nuclear factor of activated T cells 5
exception: unclassified transcription discrepancy
note: The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: inserted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 ESTs, 1 Protein, and 98% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XM_030955714.1
SIO_010081: NFAT5
subclass of: SO_0000673
so part of: NFAT5
location: complement(join(827104..832395,833228..833477,834152..836585,837118..837230,838066..838143,838641..838773,839419..839471,839646..839779,842539..842711,843515..843705,846892..847084,851539..852097,862837..862962,880054..880200))
location: region:827104-880200:-1
so has part: feature:880054-880200:-1:exon
so has part: feature:862837-862962:-1:exon
so has part: feature:851539-852097:-1:exon
so has part: feature:846892-847084:-1:exon
so has part: feature:843515-843705:-1:exon
so has part: feature:842539-842711:-1:exon
so has part: feature:839646-839779:-1:exon
so has part: feature:839419-839471:-1:exon
so has part: feature:838641-838773:-1:exon
so has part: feature:838066-838143:-1:exon
so has part: feature:837118-837230:-1:exon
so has part: feature:834152-836585:-1:exon
so has part: feature:833228-833477:-1:exon
so has part: feature:827104-832395:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:880054-880200:-1:exon

position:880054:-1
position: 880054
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:862837-862962:-1:exon

position:862837:-1
position: 862837
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:862962:-1
position: 862962
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:851539-852097:-1:exon

position:851539:-1
position: 851539
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:852097:-1
position: 852097
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:846892-847084:-1:exon

position:846892:-1
position: 846892
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:847084:-1
position: 847084
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:843515-843705:-1:exon

position:843515:-1
position: 843515
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:843705:-1
position: 843705
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:842539-842711:-1:exon

position:842539:-1
position: 842539
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:842711:-1
position: 842711
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:839646-839779:-1:exon

position:839646:-1
position: 839646
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:839779:-1
position: 839779
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:839419-839471:-1:exon

position:839419:-1
position: 839419
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:839471:-1
position: 839471
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:838641-838773:-1:exon

position:838641:-1
position: 838641
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:838773:-1
position: 838773
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:838066-838143:-1:exon

position:838066:-1
position: 838066
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:838143:-1
position: 838143
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:837118-837230:-1:exon

position:837118:-1
position: 837118
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:837230:-1
position: 837230
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:834152-836585:-1:exon

position:834152:-1
position: 834152
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:836585:-1
position: 836585
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:833228-833477:-1:exon

position:833228:-1
position: 833228
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:833477:-1
position: 833477
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:827104-832395:-1:exon

position:832395:-1
position: 832395
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

NFAT5
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 87175
gene: NFAT5
exception: unclassified translation discrepancy
note: The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: inserted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: LOW QUALITY PROTEIN: nuclear factor of activated T-cells 5
translation: MPSDFISLLSADLDLESPKSLYSKESVYDLLPKELQLPPSRETSIASMSQTSGGEAGSPPPAVVAADASSAPSSSSMGGACSSFTTSSSPTIYSTSVTDSKAMQVESCSAAVGVSSRGVSEQQLPGTAAPQQAATPKRHTVLYISPPPEDLLDNSRMSCQDEGCGLESEQSCSMWMEDSPSNFSNMSTSSYNDNTEVPRKSRKRNPKQRPGIKRRDCEESNMDIFDADSAKAPHYVLSQLSTDSKSNSKAGNGASENQKGAGGKKTPMLCGQYPTKSEGKELKIMVQPETQHRARYLTEGSRGSVKDRTQQGFPTVKLEGHNEPVVLQVFVGNDSGRVKPHGFYQACRVTGRNTTPCKEVDIEGTTVIEVGLDPSNNMTLAVDCVGILKLRNADVEARIGIAGSKKKSTRARLVFRVNITRKDGSTLTLQTPSSPILCTQPAGVPEILKKSLHSCSVKGEEEXFLIGKNFLKGTKVIFQENVSDENSWKAEAEIDMELFHQNHLIVKVPPYHDQQITSAVSVGIYVVTNAGRSHDVQPFTYTPEPAGTLNVNVKKEISSPAQHCSFEEAIKAVKATGCNLEKVNILPSALITPLMPSSMIKNEDVAPMEASNVVGPSQQTLENSMSGISTSASHLPSESENQQQIQPKVYNAETLSTIQTQDISQPGSFSAVSTPGPLQSSDALLQQAAQFQSRDSQPREVLQSDGTVVALSQLADASQQQQPTRSEPAQALQQQISSSIFSSASGVSQLQNTIQQLQAGNFPTNTATGSSRNVDLVQQVLEAQQQLSSVLFSGSDSSEDVQEQLNADIFQQVSQIQSSVNPGMFSSSDAAVHSRAENLLPGRAESVHSQPEGALSSQQQQQQQQQQAMETSAAMVMGMQQNMCQAATQMQSDLFSSSTAGNGALQQSPVYQQASHMMGGLSSSEDMQMQCELFSSSPGVSGGEAAAPAQQPVSNSGAAMFQPSSSAEGEEASGQSKQMQSSVFQTMVQMQHSGESQSQVNLFSSTKTMMSVQAGGTQQQGGALFQQGGEMMSIQSGSFIQQSPHSQAQLFHSQNPIGDTQNISQETQGSLFHSSNSIVHNQTNTNSSDQLQPPMFHSQNAMGVLQSSSVPQDQQSANMFLSQSSMSNPATQEEQMSFFTSPNPISPLQTATNTEQQPSFQQQTQISHIQSSMLPQEQPQAQPAQQGLFQSQVSLGSIQSSSIPQNQQGAIFQPQHSIVAIQSSPPSQEQQQQQQQNMMFSNQNAMSTMAPQKQNMIFNPNQNPVTNQEQQGQSIFHPQSNMAPMNQEQQPMQFQSQTTVSSLQNPGSSQAEAQQPTIFHNSPQIQLVQGSPSSQEQQVTLFISSASMSALQNSMSQPELQQSPMYSSQNSMAGMPGTASPPQQQAPLFHNTAGGTINQLQNSPASSQQTSGIFLFGIQSNCGQLLPPGPAALPEELMAMGQPGQAQGEAQPPVPTLLSQPLPETPPLPPAMATNQNMEKIDDLLVSLQNQGNNMAGSF
SIO_010081: NFAT5
subclass of: SO_0000673
so part of: NFAT5
location: complement(join(833239..833477,834152..836585,837118..837230,838066..838143,838641..838773,839419..839471,839646..839779,842539..842711,843515..843705,846892..847084,851539..852097,862837..862962,880054..880126))
location: region:833239-880126:-1
so has part: feature:880054-880126:-1:exon
so has part: feature:862837-862962:-1:exon
so has part: feature:851539-852097:-1:exon
so has part: feature:846892-847084:-1:exon
so has part: feature:843515-843705:-1:exon
so has part: feature:842539-842711:-1:exon
so has part: feature:839646-839779:-1:exon
so has part: feature:839419-839471:-1:exon
so has part: feature:838641-838773:-1:exon
so has part: feature:838066-838143:-1:exon
so has part: feature:837118-837230:-1:exon
so has part: feature:834152-836585:-1:exon
so has part: feature:833239-833477:-1:exon

XP_030811574.1
type: Protein
SIO_000068: ncbiprotein

position:833239:-1
position: 833239
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:880126:-1
position: 880126
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:880054-880126:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:862837-862962:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:851539-852097:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:846892-847084:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:843515-843705:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:842539-842711:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:839646-839779:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:839419-839471:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:838641-838773:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:838066-838143:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:837118-837230:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:834152-836585:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:833239-833477:-1:exon

LOC115907951
type: Gene
subclass of: SO_0000704
RO_0002162: 87175
gene: LOC115907951
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(887311..897075)
location: region:887311-897075:-1
so has part: feature:887311-897075:-1:exon
subclass of: SO_0000010

115907951
type: Gene
SIO_000068: ncbigene

position:887311:-1
position: 887311
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:897075:-1
position: 897075
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:887311-897075:-1:exon

LOC115907951
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 87175
gene: LOC115907951
product: cytochrome b5
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 mRNAs, 25 ESTs, 19 Proteins, and 96% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
transcript id: XM_030956188.1
SIO_010081: LOC115907951
subclass of: SO_0000673
so part of: LOC115907951
location: complement(join(887311..887977,888868..888899,890166..890192,890640..890768,896854..897075))
location: region:887311-897075:-1
so has part: feature:896854-897075:-1:exon
so has part: feature:890640-890768:-1:exon
so has part: feature:890166-890192:-1:exon
so has part: feature:888868-888899:-1:exon
so has part: feature:887311-887977:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:896854-897075:-1:exon

position:896854:-1
position: 896854
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:890640-890768:-1:exon

position:890640:-1
position: 890640
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:890768:-1
position: 890768
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:890166-890192:-1:exon

position:890166:-1
position: 890166
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:890192:-1
position: 890192
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:888868-888899:-1:exon

position:888868:-1
position: 888868
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:888899:-1
position: 888899
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:887311-887977:-1:exon

position:887977:-1
position: 887977
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC115907951
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 87175
gene: LOC115907951
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: cytochrome b5
translation: MEGGRRGEAAAAAAAGDGPAPVFTLEEVAKRNSSREAWLVIHGRVYDVTRFLEEHPGGEEVLLEQAGRDATESFEDVGHSTDAREMLKQYYIGEVHPNDREKGGSKNPSRTSSGQTSFWSTWLIPIFGALVLGLMYRYYMADGKSS
SIO_010081: LOC115907951
subclass of: SO_0000673
so part of: LOC115907951
location: complement(join(887887..887977,888868..888899,890166..890192,890640..890768,896854..897015))
location: region:887887-897015:-1
so has part: feature:896854-897015:-1:exon
so has part: feature:890640-890768:-1:exon
so has part: feature:890166-890192:-1:exon
so has part: feature:888868-888899:-1:exon
so has part: feature:887887-887977:-1:exon

XP_030812048.1
type: Protein
SIO_000068: ncbiprotein

position:887887:-1
position: 887887
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:897015:-1
position: 897015
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:896854-897015:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:890640-890768:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:890166-890192:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:888868-888899:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:887887-887977:-1:exon

TERF2
type: Gene
subclass of: SO_0000704
RO_0002162: 87175
gene: TERF2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 901068..906698
location: region:901068-906698:1
so has part: feature:901068-906698:1:exon
subclass of: SO_0000010

115908026
type: Gene
SIO_000068: ncbigene

position:901068:1
position: 901068
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:906698:1
position: 906698
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:901068-906698:1:exon

TERF2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 87175
gene: TERF2
product: telomeric repeat binding factor 2, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 ESTs, 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XM_030956310.1
SIO_010081: TERF2
subclass of: SO_0000673
so part of: TERF2
location: join(901068..901320,901413..901508,902010..902140,902340..902426,902948..903094,903266..903720,904160..904546,905014..905099,905355..905404,905804..906698)
location: region:901068-906698:1
so has part: feature:901068-901320:1:exon
so has part: feature:901413-901508:1:exon
so has part: feature:902010-902140:1:exon
so has part: feature:902340-902426:1:exon
so has part: feature:902948-903094:1:exon
so has part: feature:903266-903720:1:exon
so has part: feature:904160-904546:1:exon
so has part: feature:905014-905099:1:exon
so has part: feature:905355-905404:1:exon
so has part: feature:905804-906698:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:901068-901320:1:exon

position:901320:1
position: 901320
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:901413-901508:1:exon

position:901413:1
position: 901413
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:901508:1
position: 901508
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:902010-902140:1:exon

position:902010:1
position: 902010
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:902140:1
position: 902140
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:902340-902426:1:exon

position:902340:1
position: 902340
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:902426:1
position: 902426
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:902948-903094:1:exon

position:902948:1
position: 902948
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:903094:1
position: 903094
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:903266-903720:1:exon

position:903266:1
position: 903266
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:903720:1
position: 903720
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:904160-904546:1:exon

position:904160:1
position: 904160
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:904546:1
position: 904546
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:905014-905099:1:exon

position:905014:1
position: 905014
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:905099:1
position: 905099
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:905355-905404:1:exon

position:905355:1
position: 905355
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:905404:1
position: 905404
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:905804-906698:1:exon

position:905804:1
position: 905804
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

TERF2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 87175
gene: TERF2
product: telomeric repeat binding factor 2, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 ESTs, 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XM_030956312.1
SIO_010081: TERF2
subclass of: SO_0000673
so part of: TERF2
location: join(901068..901320,901413..901508,902010..902140,902340..902426,902948..903094,903266..903720,904316..904546,905014..905099,905355..905404,905804..906698)
location: region:901068-906698:1
so has part: feature:901068-901320:1:exon
so has part: feature:901413-901508:1:exon
so has part: feature:902010-902140:1:exon
so has part: feature:902340-902426:1:exon
so has part: feature:902948-903094:1:exon
so has part: feature:903266-903720:1:exon
so has part: feature:904316-904546:1:exon
so has part: feature:905014-905099:1:exon
so has part: feature:905355-905404:1:exon
so has part: feature:905804-906698:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:901068-901320:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:901413-901508:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:902010-902140:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:902340-902426:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:902948-903094:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:903266-903720:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:904316-904546:1:exon

position:904316:1
position: 904316
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:905014-905099:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:905355-905404:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:905804-906698:1:exon

TERF2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 87175
gene: TERF2
product: telomeric repeat binding factor 2, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 ESTs, 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XM_030956311.1
SIO_010081: TERF2
subclass of: SO_0000673
so part of: TERF2
location: join(901068..901320,901413..901508,902010..902140,902340..902426,902951..903094,903266..903720,904160..904546,905014..905099,905355..905404,905804..906698)
location: region:901068-906698:1
so has part: feature:901068-901320:1:exon
so has part: feature:901413-901508:1:exon
so has part: feature:902010-902140:1:exon
so has part: feature:902340-902426:1:exon
so has part: feature:902951-903094:1:exon
so has part: feature:903266-903720:1:exon
so has part: feature:904160-904546:1:exon
so has part: feature:905014-905099:1:exon
so has part: feature:905355-905404:1:exon
so has part: feature:905804-906698:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:901068-901320:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:901413-901508:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:902010-902140:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:902340-902426:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:902951-903094:1:exon

position:902951:1
position: 902951
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:903266-903720:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:904160-904546:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:905014-905099:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:905355-905404:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:905804-906698:1:exon

TERF2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 87175
gene: TERF2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: telomeric repeat-binding factor 2 isoform X1
translation: MATRRLARRERDPERDRDTDGGPEPDRAGMAALPEKTVNRWVLQFYFHRAIEAYRSGRNRDFRQFRDIMQALLVRPLDREPDMAQMLRIMQLLSRVEEGENLDCTFDKESELTPLESAMLVLDFIREEFSVADRTMEAVQKMVKEAAVVVCIRNKEFEKASDIVKKHMGKEPRNQKKRNEWLAVIREKNASHPKVKNFSYEEFQQSIFEFLRGYMDDSEPALLTLLKKTLDSEHAGKAKSSLGTSESADGLKDQAAAPEAPARAEGPTSSPEASGRAEGPARAPELAGAAEDLEGAASPAKRAAGPTAAPEMMEEAGGSAAAVEPMEVATDPAATPEHLPAAYDILKGTPEPMEVAKEPAAAGPEPPRVSTRESPRQPPGAVTSCGISVLREAFKILSDSGDSDALFTKLDQTDLPSPKQLSPSVSHRTKRCREVENQASETSEPPEIPHNIKNLFSISNLIVELDGSSSKSSECPDSSQEHVVSSASKPAPKLPDEPLSAQSEKSFQGRWNSSCGTEEKDSWSDEDELFANAASLEKNKTSNNSGSKKQKWTMEESEWIKEGVKKYGEGRWKTICLKFPFRNRTSVMIKDRWRTMKKLGML
SIO_010081: TERF2
subclass of: SO_0000673
so part of: TERF2
location: join(901110..901320,901413..901508,902010..902140,902340..902426,902948..903094,903266..903720,904160..904546,905014..905099,905355..905404,905804..905962)
location: region:901110-905962:1
so has part: feature:901110-901320:1:exon
so has part: feature:901413-901508:1:exon
so has part: feature:902010-902140:1:exon
so has part: feature:902340-902426:1:exon
so has part: feature:902948-903094:1:exon
so has part: feature:903266-903720:1:exon
so has part: feature:904160-904546:1:exon
so has part: feature:905014-905099:1:exon
so has part: feature:905355-905404:1:exon
so has part: feature:905804-905962:1:exon

XP_030812170.1
type: Protein
SIO_000068: ncbiprotein

position:901110:1
position: 901110
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:905962:1
position: 905962
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:901110-901320:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:901413-901508:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:902010-902140:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:902340-902426:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:902948-903094:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:903266-903720:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:904160-904546:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:905014-905099:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:905355-905404:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:905804-905962:1:exon

TERF2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 87175
gene: TERF2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: telomeric repeat-binding factor 2 isoform X3
translation: MATRRLARRERDPERDRDTDGGPEPDRAGMAALPEKTVNRWVLQFYFHRAIEAYRSGRNRDFRQFRDIMQALLVRPLDREPDMAQMLRIMQLLSRVEEGENLDCTFDKESELTPLESAMLVLDFIREEFSVADRTMEAVQKMVKEAAVVVCIRNKEFEKASDIVKKHMGKEPRNQKKRNEWLAVIREKNASHPKVKNFSYEEFQQSIFEFLRGYMDDSEPALLTLLKKTLDSEHAGKAKSSLGTSESADGLKDQAAAPEAPARAEGPTSSPEASGRAEGPARAPELAGAAEDLEGAASPAKRAAGPTAAPEMMEEAGGSAAAVEPMEVATDPAATPEHLPAAYDILKGTPEPMEVAKEPAAAGPEPPRVSTRESPRTKRCREVENQASETSEPPEIPHNIKNLFSISNLIVELDGSSSKSSECPDSSQEHVVSSASKPAPKLPDEPLSAQSEKSFQGRWNSSCGTEEKDSWSDEDELFANAASLEKNKTSNNSGSKKQKWTMEESEWIKEGVKKYGEGRWKTICLKFPFRNRTSVMIKDRWRTMKKLGML
SIO_010081: TERF2
subclass of: SO_0000673
so part of: TERF2
location: join(901110..901320,901413..901508,902010..902140,902340..902426,902948..903094,903266..903720,904316..904546,905014..905099,905355..905404,905804..905962)
location: region:901110-905962:1
so has part: feature:901110-901320:1:exon
so has part: feature:901413-901508:1:exon
so has part: feature:902010-902140:1:exon
so has part: feature:902340-902426:1:exon
so has part: feature:902948-903094:1:exon
so has part: feature:903266-903720:1:exon
so has part: feature:904316-904546:1:exon
so has part: feature:905014-905099:1:exon
so has part: feature:905355-905404:1:exon
so has part: feature:905804-905962:1:exon

XP_030812172.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:901110-901320:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:901413-901508:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:902010-902140:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:902340-902426:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:902948-903094:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:903266-903720:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:904316-904546:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:905014-905099:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:905355-905404:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:905804-905962:1:exon

TERF2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 87175
gene: TERF2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: telomeric repeat-binding factor 2 isoform X2
translation: MATRRLARRERDPERDRDTDGGPEPDRAGMAALPEKTVNRWVLQFYFHRAIEAYRSGRNRDFRQFRDIMQALLVRPLDREPDMAQMLRIMQLLSRVEEGENLDCTFDKESELTPLESAMLVLDFIREEFSVADRTMEAVQKMVKEAAVVVCIRNKEFEKASDIVKKHMGKEPRNQKRNEWLAVIREKNASHPKVKNFSYEEFQQSIFEFLRGYMDDSEPALLTLLKKTLDSEHAGKAKSSLGTSESADGLKDQAAAPEAPARAEGPTSSPEASGRAEGPARAPELAGAAEDLEGAASPAKRAAGPTAAPEMMEEAGGSAAAVEPMEVATDPAATPEHLPAAYDILKGTPEPMEVAKEPAAAGPEPPRVSTRESPRQPPGAVTSCGISVLREAFKILSDSGDSDALFTKLDQTDLPSPKQLSPSVSHRTKRCREVENQASETSEPPEIPHNIKNLFSISNLIVELDGSSSKSSECPDSSQEHVVSSASKPAPKLPDEPLSAQSEKSFQGRWNSSCGTEEKDSWSDEDELFANAASLEKNKTSNNSGSKKQKWTMEESEWIKEGVKKYGEGRWKTICLKFPFRNRTSVMIKDRWRTMKKLGML
SIO_010081: TERF2
subclass of: SO_0000673
so part of: TERF2
location: join(901110..901320,901413..901508,902010..902140,902340..902426,902951..903094,903266..903720,904160..904546,905014..905099,905355..905404,905804..905962)
location: region:901110-905962:1
so has part: feature:901110-901320:1:exon
so has part: feature:901413-901508:1:exon
so has part: feature:902010-902140:1:exon
so has part: feature:902340-902426:1:exon
so has part: feature:902951-903094:1:exon
so has part: feature:903266-903720:1:exon
so has part: feature:904160-904546:1:exon
so has part: feature:905014-905099:1:exon
so has part: feature:905355-905404:1:exon
so has part: feature:905804-905962:1:exon

XP_030812171.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:901110-901320:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:901413-901508:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:902010-902140:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:902340-902426:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:902951-903094:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:903266-903720:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:904160-904546:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:905014-905099:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:905355-905404:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:905804-905962:1:exon

TMED6
type: Gene
subclass of: SO_0000704
RO_0002162: 87175
gene: TMED6
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 907315..908974
location: region:907315-908974:1
so has part: feature:907315-908974:1:exon
subclass of: SO_0000010

115908027
type: Gene
SIO_000068: ncbigene

position:907315:1
position: 907315
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:908974:1
position: 908974
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:907315-908974:1:exon

TMED6
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 87175
gene: TMED6
product: transmembrane p24 trafficking protein 6
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 Proteins
transcript id: XM_030956313.1
SIO_010081: TMED6
subclass of: SO_0000673
so part of: TMED6
location: join(907315..907512,908203..908329,908473..908624,908750..908974)
location: region:907315-908974:1
so has part: feature:907315-907512:1:exon
so has part: feature:908203-908329:1:exon
so has part: feature:908473-908624:1:exon
so has part: feature:908750-908974:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:907315-907512:1:exon

position:907512:1
position: 907512
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:908203-908329:1:exon

position:908203:1
position: 908203
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:908329:1
position: 908329
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:908473-908624:1:exon

position:908473:1
position: 908473
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:908624:1
position: 908624
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:908750-908974:1:exon

position:908750:1
position: 908750
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

TMED6
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 87175
gene: TMED6
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: transmembrane emp24 domain-containing protein 6
translation: MLLLLLLALLGPAGCPRPEPLSGGSSQEPLFRGADRYDFAMVIPAGTAECFWQFSHQGGNFFFSYEVQRATGIGNSRSILVTASDPNGFQLGVSQDVRGQINFLTKDTGFYQLCLDNHRNHFGLMQVYLNFGVYYDDFNMEHKQPAERKELNDTLEAIGASIQKLHVHTFHMWRFYNLARMRKMADSILLESNYNYINWWSMAQSCVIVLSGVLQLCFLKRLFHAQSSGSQRC
SIO_010081: TMED6
subclass of: SO_0000673
so part of: TMED6
location: join(907315..907512,908203..908329,908473..908624,908750..908974)
location: region:907315-908974:1
so has part: feature:907315-907512:1:exon
so has part: feature:908203-908329:1:exon
so has part: feature:908473-908624:1:exon
so has part: feature:908750-908974:1:exon

XP_030812173.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:907315-907512:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:908203-908329:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:908473-908624:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:908750-908974:1:exon

NIP7
type: Gene
subclass of: SO_0000704
RO_0002162: 87175
gene: NIP7
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(909477..911089)
location: region:909477-911089:-1
so has part: feature:909477-911089:-1:exon
subclass of: SO_0000010

115907899
type: Gene
SIO_000068: ncbigene

position:909477:-1
position: 909477
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:911089:-1
position: 911089
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:909477-911089:-1:exon

NIP7
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 87175
gene: NIP7
product: nucleolar pre-rRNA processing protein NIP7
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 mRNAs, 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
transcript id: XM_030956120.1
SIO_010081: NIP7
subclass of: SO_0000673
so part of: NIP7
location: complement(join(909477..909803,909881..910021,910388..910526,910604..910690,910973..911089))
location: region:909477-911089:-1
so has part: feature:910973-911089:-1:exon
so has part: feature:910604-910690:-1:exon
so has part: feature:910388-910526:-1:exon
so has part: feature:909881-910021:-1:exon
so has part: feature:909477-909803:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:910973-911089:-1:exon

position:910973:-1
position: 910973
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:910604-910690:-1:exon

position:910604:-1
position: 910604
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:910690:-1
position: 910690
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:910388-910526:-1:exon

position:910388:-1
position: 910388
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:910526:-1
position: 910526
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:909881-910021:-1:exon

position:909881:-1
position: 909881
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:910021:-1
position: 910021
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:909477-909803:-1:exon

position:909803:-1
position: 909803
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

NIP7
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 87175
gene: NIP7
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: 60S ribosome subunit biogenesis protein NIP7 homolog
translation: MRPLTEAETRAVFEKLGKYIGENIQLLVDRPDGTYCFRLHRDRVYYLSEKLLKLAASVPRESLVAPGTCFGKFTKSQKFRLSVTALDFLAPYAKYKVWVKPGSEQSFLYGNHVLKSGLGRITESTAQYQGVVVYSMADVPLGFGVAAKSTQECRKVDPLAIVVFHQADVGEYVRNEDTLT
SIO_010081: NIP7
subclass of: SO_0000673
so part of: NIP7
location: complement(join(909684..909803,909881..910021,910388..910526,910604..910690,910973..911028))
location: region:909684-911028:-1
so has part: feature:910973-911028:-1:exon
so has part: feature:910604-910690:-1:exon
so has part: feature:910388-910526:-1:exon
so has part: feature:909881-910021:-1:exon
so has part: feature:909684-909803:-1:exon

XP_030811980.1
type: Protein
SIO_000068: ncbiprotein

position:909684:-1
position: 909684
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:911028:-1
position: 911028
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:910973-911028:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:910604-910690:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:910388-910526:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:909881-910021:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:909684-909803:-1:exon

COG8
type: Gene
subclass of: SO_0000704
RO_0002162: 87175
gene: COG8
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 911145..914060
location: region:911145-914060:1
so has part: feature:911145-914060:1:exon
subclass of: SO_0000010

115908047
type: Gene
SIO_000068: ncbigene

position:911145:1
position: 911145
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:914060:1
position: 914060
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:911145-914060:1:exon

COG8
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 87175
gene: COG8
product: component of oligomeric golgi complex 8
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 Proteins, and 98% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
transcript id: XM_030956340.1
SIO_010081: COG8
subclass of: SO_0000673
so part of: COG8
location: join(911145..911464,911649..911856,911973..912791,913475..913643,913780..914060)
location: region:911145-914060:1
so has part: feature:911145-911464:1:exon
so has part: feature:911649-911856:1:exon
so has part: feature:911973-912791:1:exon
so has part: feature:913475-913643:1:exon
so has part: feature:913780-914060:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:911145-911464:1:exon

position:911464:1
position: 911464
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:911649-911856:1:exon

position:911649:1
position: 911649
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:911856:1
position: 911856
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:911973-912791:1:exon

position:911973:1
position: 911973
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:912791:1
position: 912791
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:913475-913643:1:exon

position:913475:1
position: 913475
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:913643:1
position: 913643
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:913780-914060:1:exon

position:913780:1
position: 913780
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

COG8
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 87175
gene: COG8
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: conserved oligomeric Golgi complex subunit 8
translation: MAAAAAAEEARLLAWLRGPAAPGGPELAAYVSELAALGLAELGREPARLAAERARVGAETRRLAFEHYRAFIRSAECTGRAGRGFGGIESRLGSLLERLPALQDACRNFMRDAEAIACSRRMNSLTLNRHTEILEILEIPQLMDTCVRNGYYEEALELTAYVRRLERKHSNIPVIQGIVEEVRQSAQLMLNQLIQQLRTNIPLPACLRVIGFLRRMDVLTEAELRVKFLQARDAWLRSMQASIPDHDPYVHITKTIEACRVHLFDIVTQYRAIFSDEEPLVPAEAAAPGEGAIFHSWVLQKVSEFLRTLRRDLERGVGGRLDSLLGQCMYFGLSFSRVGVDFRGQLAPLFQRVAADAFRKAVEEAVEKFREEMNSYTLISAPAVLGGGAGVPVPTAQPGTLQPPMVLLDFPPLACFLNGLLVAFNDLRLCCPIALAQDVTACLDSALGEVTKTILAFHRAEEAAFSGREQELFTQFCTAFLEDLLPYLNRCLQVLFPPAQIAQALGVPPTQLQRFGRLGRIDVAALREPLAFLLPPAPAEEEPSLETTPDPEGEHAAVPTEPAESPSEEAALPGAPVPTG
SIO_010081: COG8
subclass of: SO_0000673
so part of: COG8
location: join(911145..911464,911649..911856,911973..912791,913475..913643,913780..914006)
location: region:911145-914006:1
so has part: feature:911145-911464:1:exon
so has part: feature:911649-911856:1:exon
so has part: feature:911973-912791:1:exon
so has part: feature:913475-913643:1:exon
so has part: feature:913780-914006:1:exon

XP_030812200.1
type: Protein
SIO_000068: ncbiprotein

position:914006:1
position: 914006
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:911145-911464:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:911649-911856:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:911973-912791:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:913475-913643:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:913780-914006:1:exon

PDF
type: Gene
subclass of: SO_0000704
RO_0002162: 87175
gene: PDF
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 914125..915351
location: region:914125-915351:1
so has part: feature:914125-915351:1:exon
subclass of: SO_0000010

115908038
type: Gene
SIO_000068: ncbigene

position:914125:1
position: 914125
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:915351:1
position: 915351
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:914125-915351:1:exon

PDF
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 87175
gene: PDF
product: peptide deformylase, mitochondrial
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 7 Proteins, and 87% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
transcript id: XM_030956328.1
SIO_010081: PDF
subclass of: SO_0000673
so part of: PDF
location: join(914125..914671,914911..915351)
location: region:914125-915351:1
so has part: feature:914125-914671:1:exon
so has part: feature:914911-915351:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:914125-914671:1:exon

position:914671:1
position: 914671
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:914911-915351:1:exon

position:914911:1
position: 914911
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

PDF
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 87175
gene: PDF
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: peptide deformylase, mitochondrial
translation: MAAAAAGRALPGRALPGLPLLPARACGHAAGWDRRERSYWRALRRRVLGPPVPPFAAPVQVGAPVLRGAAAAVSPEQLGGPELRRLAAALAAGLRGRPCLGLSAPQLGVPLRVFAAELPPARCARYPPALRQAHRIEPFPLRVLVNPAVRVLDTRLVTGPEGCASIHGFSAYVPRHWAVHVTGVDELGVPVSWEASGWAARIIQHEMDHLDGILYIDRMDPRTFTNVGWMELLD
SIO_010081: PDF
subclass of: SO_0000673
so part of: PDF
location: join(914125..914671,914911..915068)
location: region:914125-915068:1
so has part: feature:914125-914671:1:exon
so has part: feature:914911-915068:1:exon

XP_030812188.1
type: Protein
SIO_000068: ncbiprotein

position:915068:1
position: 915068
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:914125-914671:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:914911-915068:1:exon

VPS4A
type: Gene
subclass of: SO_0000704
RO_0002162: 87175
gene: VPS4A
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(915630..919230)
location: region:915630-919230:-1
so has part: feature:915630-919230:-1:exon
subclass of: SO_0000010

115908036
type: Gene
SIO_000068: ncbigene

position:915630:-1
position: 915630
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:919230:-1
position: 919230
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:915630-919230:-1:exon

VPS4A
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 87175
gene: VPS4A
product: vacuolar protein sorting 4 homolog A
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 7 ESTs, 19 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
transcript id: XM_030956327.1
SIO_010081: VPS4A
subclass of: SO_0000673
so part of: VPS4A
location: complement(join(915630..916012,916288..916428,916518..916737,916812..916893,916987..917135,917671..917827,917918..918037,918291..918352,918464..918611,918687..918798,919116..919230))
location: region:915630-919230:-1
so has part: feature:919116-919230:-1:exon
so has part: feature:918687-918798:-1:exon
so has part: feature:918464-918611:-1:exon
so has part: feature:918291-918352:-1:exon
so has part: feature:917918-918037:-1:exon
so has part: feature:917671-917827:-1:exon
so has part: feature:916987-917135:-1:exon
so has part: feature:916812-916893:-1:exon
so has part: feature:916518-916737:-1:exon
so has part: feature:916288-916428:-1:exon
so has part: feature:915630-916012:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:919116-919230:-1:exon

position:919116:-1
position: 919116
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:918687-918798:-1:exon

position:918687:-1
position: 918687
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:918798:-1
position: 918798
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:918464-918611:-1:exon

position:918464:-1
position: 918464
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:918611:-1
position: 918611
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:918291-918352:-1:exon

position:918291:-1
position: 918291
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:918352:-1
position: 918352
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:917918-918037:-1:exon

position:917918:-1
position: 917918
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:918037:-1
position: 918037
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:917671-917827:-1:exon

position:917671:-1
position: 917671
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:917827:-1
position: 917827
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:916987-917135:-1:exon

position:916987:-1
position: 916987
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:917135:-1
position: 917135
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:916812-916893:-1:exon

position:916812:-1
position: 916812
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:916893:-1
position: 916893
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:916518-916737:-1:exon

position:916518:-1
position: 916518
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:916737:-1
position: 916737
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:916288-916428:-1:exon

position:916288:-1
position: 916288
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:916428:-1
position: 916428
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:915630-916012:-1:exon

position:916012:-1
position: 916012
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

VPS4A
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 87175
gene: VPS4A
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: vacuolar protein sorting-associated protein 4A
translation: MTTSTLQKAIDLVTKATEEDRAKNYEEALRLYQHAVEYFLHAIKYEAHSDKAKESIRAKCVQYLDRAEKLKEYLRGKDRHGKRPVREAQNDNKGSDSDSEGENPEKKKLQEQLMGAIMMEKPNVRWSDVAGLEGAKEALKEAVILPIKFPHLFTGKRTPWRGILLFGPPGTGKSYLAKAVATEANNSTFFSVSSSDLTSKWLGESEKLVKNLFELARQHKPSIIFIDEVDSLCGSRNENESEAARRIKTEFLVQMQGVGNSSDGILVLGATNIPWVLDSAIRRRFEKRIYIPLPEEAARAQMFRLHLGNTPHSLTDANIQELARKTDGYSGADISIIVRDALMQPVRKVQSATHFKKVRGPSRTTPGAIVDDLLTPCSPGDPGASEMTWMEVPSDKLMEPVVCMSDMLRSLATTRPTVNAEDLLKVKKFTEDFGQEG
SIO_010081: VPS4A
subclass of: SO_0000673
so part of: VPS4A
location: complement(join(915911..916012,916288..916428,916518..916737,916812..916893,916987..917135,917671..917827,917918..918037,918291..918352,918464..918611,918687..918798,919116..919136))
location: region:915911-919136:-1
so has part: feature:919116-919136:-1:exon
so has part: feature:918687-918798:-1:exon
so has part: feature:918464-918611:-1:exon
so has part: feature:918291-918352:-1:exon
so has part: feature:917918-918037:-1:exon
so has part: feature:917671-917827:-1:exon
so has part: feature:916987-917135:-1:exon
so has part: feature:916812-916893:-1:exon
so has part: feature:916518-916737:-1:exon
so has part: feature:916288-916428:-1:exon
so has part: feature:915911-916012:-1:exon

XP_030812187.1
type: Protein
SIO_000068: ncbiprotein

position:915911:-1
position: 915911
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:919136:-1
position: 919136
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:919116-919136:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:918687-918798:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:918464-918611:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:918291-918352:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:917918-918037:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:917671-917827:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:916987-917135:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:916812-916893:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:916518-916737:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:916288-916428:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:915911-916012:-1:exon

SNTB2
type: Gene
subclass of: SO_0000704
RO_0002162: 87175
gene: SNTB2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(920230..927073)
location: region:920230-927073:-1
so has part: feature:920230-927073:-1:exon
subclass of: SO_0000010

115908071
type: Gene
SIO_000068: ncbigene

position:920230:-1
position: 920230
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:927073:-1
position: 927073
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:920230-927073:-1:exon

SNTB2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 87175
gene: SNTB2
product: syntrophin beta 2, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, 14 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
transcript id: XM_030956368.1
SIO_010081: SNTB2
subclass of: SO_0000673
so part of: SNTB2
location: complement(join(920230..921198,921393..921574,921663..921859,921968..922110,922613..922823,923192..923402,926628..927073))
location: region:920230-927073:-1
so has part: feature:926628-927073:-1:exon
so has part: feature:923192-923402:-1:exon
so has part: feature:922613-922823:-1:exon
so has part: feature:921968-922110:-1:exon
so has part: feature:921663-921859:-1:exon
so has part: feature:921393-921574:-1:exon
so has part: feature:920230-921198:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:926628-927073:-1:exon

position:926628:-1
position: 926628
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:923192-923402:-1:exon

position:923192:-1
position: 923192
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:923402:-1
position: 923402
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:922613-922823:-1:exon

position:922613:-1
position: 922613
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:922823:-1
position: 922823
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:921968-922110:-1:exon

position:921968:-1
position: 921968
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:922110:-1
position: 922110
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:921663-921859:-1:exon

position:921663:-1
position: 921663
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:921859:-1
position: 921859
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:921393-921574:-1:exon

position:921393:-1
position: 921393
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:921574:-1
position: 921574
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:920230-921198:-1:exon

position:921198:-1
position: 921198
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

SNTB2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 87175
gene: SNTB2
product: syntrophin beta 2, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_030956370.1
SIO_010081: SNTB2
subclass of: SO_0000673
so part of: SNTB2
location: complement(join(920230..921198,921393..921574,921663..921859,921968..922110,922613..922823,923192..923402,926628..926749,926877..926984))
location: region:920230-926984:-1
so has part: feature:926877-926984:-1:exon
so has part: feature:926628-926749:-1:exon
so has part: feature:923192-923402:-1:exon
so has part: feature:922613-922823:-1:exon
so has part: feature:921968-922110:-1:exon
so has part: feature:921663-921859:-1:exon
so has part: feature:921393-921574:-1:exon
so has part: feature:920230-921198:-1:exon

position:926984:-1
position: 926984
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:926877-926984:-1:exon

position:926877:-1
position: 926877
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:926628-926749:-1:exon

position:926749:-1
position: 926749
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:923192-923402:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:922613-922823:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:921968-922110:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:921663-921859:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:921393-921574:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:920230-921198:-1:exon

SNTB2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 87175
gene: SNTB2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: beta-2-syntrophin isoform X1
translation: MAVWTRACKTGLLELLLRERWVRVSAELTGETLSLTAEPGTGDPSVVNGVVNGNAEAAAPGGVRRVRVVKAEAGGLGISIKGGRENRMPVLISRIFPGLAAERSGALRLGDAILAVNGVDLRDATHDQAVQALKRAGREVILEVKFMREVTPYIKKPSLVSDLPWEGAAPQSPSLSGSEDSGSPQHQGPRDRKVIPLKMCFAARNLSMPDLENRLIELHSPDSRNTLVLRCRDTATAHAWFSALHANITALLPQVLAELNATLGSGSPTAGGREVKHIAWLAEQARLDGGRQQWRPVLMAVTEKDLLLYDGMPWTRDAWASPCHSYPLVATRLVHSGSGRRSPALGSELTFATRTGSRQGVEMHVFRVETHRDLSAWTRVLVQGCHAAAELIKEVTVGCTLGGQEVQLSIHYEGGFTISRDEPGSSVLFRYPYERLKMSADDGIRTLYLDFGGPEGELALDLHSCPKPIVFVLHTFLSAKVTRMGLLA
SIO_010081: SNTB2
subclass of: SO_0000673
so part of: SNTB2
location: complement(join(921106..921198,921393..921574,921663..921859,921968..922110,922613..922823,923192..923402,926628..927057))
location: region:921106-927057:-1
so has part: feature:926628-927057:-1:exon
so has part: feature:923192-923402:-1:exon
so has part: feature:922613-922823:-1:exon
so has part: feature:921968-922110:-1:exon
so has part: feature:921663-921859:-1:exon
so has part: feature:921393-921574:-1:exon
so has part: feature:921106-921198:-1:exon

XP_030812228.1
type: Protein
SIO_000068: ncbiprotein

position:921106:-1
position: 921106
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:927057:-1
position: 927057
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:926628-927057:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:923192-923402:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:922613-922823:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:921968-922110:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:921663-921859:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:921393-921574:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:921106-921198:-1:exon

SNTB2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 87175
gene: SNTB2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: beta-2-syntrophin isoform X2
translation: MREVTPYIKKPSLVSDLPWEGAAPQSPSLSGSEDSGSPQHQGPRDRKVIPLKMCFAARNLSMPDLENRLIELHSPDSRNTLVLRCRDTATAHAWFSALHANITALLPQVLAELNATLGSGSPTAGGREVKHIAWLAEQARLDGGRQQWRPVLMAVTEKDLLLYDGMPWTRDAWASPCHSYPLVATRLVHSGSGRRSPALGSELTFATRTGSRQGVEMHVFRVETHRDLSAWTRVLVQGCHAAAELIKEVTVGCTLGGQEVQLSIHYEGGFTISRDEPGSSVLFRYPYERLKMSADDGIRTLYLDFGGPEGELALDLHSCPKPIVFVLHTFLSAKVTRMGLLA
SIO_010081: SNTB2
subclass of: SO_0000673
so part of: SNTB2
location: complement(join(921106..921198,921393..921574,921663..921859,921968..922110,922613..922823,923192..923394))
location: region:921106-923394:-1
so has part: feature:923192-923394:-1:exon
so has part: feature:922613-922823:-1:exon
so has part: feature:921968-922110:-1:exon
so has part: feature:921663-921859:-1:exon
so has part: feature:921393-921574:-1:exon
so has part: feature:921106-921198:-1:exon

XP_030812230.1
type: Protein
SIO_000068: ncbiprotein

position:923394:-1
position: 923394
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:923192-923394:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:922613-922823:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:921968-922110:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:921663-921859:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:921393-921574:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:921106-921198:-1:exon

UTP4
type: Gene
subclass of: SO_0000704
RO_0002162: 87175
gene: UTP4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(927684..932543)
location: region:927684-932543:-1
so has part: feature:927684-932543:-1:exon
subclass of: SO_0000010

115907829
type: Gene
SIO_000068: ncbigene

position:927684:-1
position: 927684
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:932543:-1
position: 932543
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:927684-932543:-1:exon

UTP4
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 87175
gene: UTP4
product: UTP4 small subunit processome component, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 13 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
transcript id: XM_030955998.1
SIO_010081: UTP4
subclass of: SO_0000673
so part of: UTP4
location: complement(join(927684..927903,928247..928357,928436..928621,928751..928846,929069..929175,929390..929549,929654..929776,929878..929942,930129..930225,930574..930665,930746..930917,931038..931246,931538..931627,931708..931792,931872..932063,932320..932543))
location: region:927684-932543:-1
so has part: feature:932320-932543:-1:exon
so has part: feature:931872-932063:-1:exon
so has part: feature:931708-931792:-1:exon
so has part: feature:931538-931627:-1:exon
so has part: feature:931038-931246:-1:exon
so has part: feature:930746-930917:-1:exon
so has part: feature:930574-930665:-1:exon
so has part: feature:930129-930225:-1:exon
so has part: feature:929878-929942:-1:exon
so has part: feature:929654-929776:-1:exon
so has part: feature:929390-929549:-1:exon
so has part: feature:929069-929175:-1:exon
so has part: feature:928751-928846:-1:exon
so has part: feature:928436-928621:-1:exon
so has part: feature:928247-928357:-1:exon
so has part: feature:927684-927903:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:932320-932543:-1:exon

position:932320:-1
position: 932320
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:931872-932063:-1:exon

position:931872:-1
position: 931872
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:932063:-1
position: 932063
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:931708-931792:-1:exon

position:931708:-1
position: 931708
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:931792:-1
position: 931792
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:931538-931627:-1:exon

position:931538:-1
position: 931538
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:931627:-1
position: 931627
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:931038-931246:-1:exon

position:931038:-1
position: 931038
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:931246:-1
position: 931246
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:930746-930917:-1:exon

position:930746:-1
position: 930746
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:930917:-1
position: 930917
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:930574-930665:-1:exon

position:930574:-1
position: 930574
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:930665:-1
position: 930665
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:930129-930225:-1:exon

position:930129:-1
position: 930129
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:930225:-1
position: 930225
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:929878-929942:-1:exon

position:929878:-1
position: 929878
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:929942:-1
position: 929942
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:929654-929776:-1:exon

position:929654:-1
position: 929654
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:929776:-1
position: 929776
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:929390-929549:-1:exon

position:929390:-1
position: 929390
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:929549:-1
position: 929549
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:929069-929175:-1:exon

position:929069:-1
position: 929069
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:929175:-1
position: 929175
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:928751-928846:-1:exon

position:928751:-1
position: 928751
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:928846:-1
position: 928846
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:928436-928621:-1:exon

position:928436:-1
position: 928436
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:928621:-1
position: 928621
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:928247-928357:-1:exon

position:928247:-1
position: 928247
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:928357:-1
position: 928357
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:927684-927903:-1:exon

position:927903:-1
position: 927903
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

UTP4
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 87175
gene: UTP4
product: UTP4 small subunit processome component, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 97% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
transcript id: XM_030955997.1
SIO_010081: UTP4
subclass of: SO_0000673
so part of: UTP4
location: complement(join(927684..927903,928247..928621,928751..928846,929069..929175,929390..929549,929654..929776,929878..929942,930129..930225,930574..930665,930746..930917,931038..931246,931538..931627,931708..931792,931872..932063,932320..932543))
location: region:927684-932543:-1
so has part: feature:932320-932543:-1:exon
so has part: feature:931872-932063:-1:exon
so has part: feature:931708-931792:-1:exon
so has part: feature:931538-931627:-1:exon
so has part: feature:931038-931246:-1:exon
so has part: feature:930746-930917:-1:exon
so has part: feature:930574-930665:-1:exon
so has part: feature:930129-930225:-1:exon
so has part: feature:929878-929942:-1:exon
so has part: feature:929654-929776:-1:exon
so has part: feature:929390-929549:-1:exon
so has part: feature:929069-929175:-1:exon
so has part: feature:928751-928846:-1:exon
so has part: feature:928247-928621:-1:exon
so has part: feature:927684-927903:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:932320-932543:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:931872-932063:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:931708-931792:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:931538-931627:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:931038-931246:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:930746-930917:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:930574-930665:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:930129-930225:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:929878-929942:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:929654-929776:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:929390-929549:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:929069-929175:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:928751-928846:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:928247-928621:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:927684-927903:-1:exon

UTP4
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 87175
gene: UTP4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: U3 small nucleolar RNA-associated protein 4 homolog isoform X2
translation: MGEFEVHRVRFFGLVPAGVRCLACHPRGTRLALARTDGAVEVYNFSANYFQEKVIPGHEARSVESLCWAAGDRLFGAGLGGDITEYDLSGLSAARGLDGGGGPIWSMVANSTGTQLAIGCEDGSVKIFQVVPGGIQFERNLDRRKGRVLCLSWHPSDTHIVAGSIDFFRVINVTSGQTVQRIMVNHRVEKAKRECVVWAIALLSSGTVVSADSFGRVQFWDWEQGTLAESHTVSTSAVLSLAVSQKEDSMIVGTSTGATYHLQLLPVRLGGLEKRWVRTKPFQFHSHDVRAVAHSPTALISGGLDAQLVIRPLMEKVQKKSYDAALRKFTFPHRRLVSCARKARLLLFQFSQYLELWRLGSTEETGKDGEVLPLCRMPEHLVQLKSKGPEHIYCSCVSPCGTWLGYSTASRFQLYRVRCDGDGVSLRKVPKVPKLLPPAYQLQFSADSESLFVASARGSVHVLQLLEPGGCKHLHTLRPPSGCSEAVYLLAPSADGHWLAAVTGDWAIHIYNLKCFKHHCVVPNYDCAVSALAIHPSTNNLVIAYSDQQLFEFSIPEKQYTSWSRAVQSRGLHRAWLERDSPITHITFNPKNPSHILLHDTYLLCVLDKSLPLPDDSALLMNQSTLKQLPETARKRQLHAFKICKKFQPLLFMDLLDKNCLVVVERPIMDFKTQLPLPVQQKKFGT
SIO_010081: UTP4
subclass of: SO_0000673
so part of: UTP4
location: complement(join(927787..927903,928247..928357,928436..928621,928751..928846,929069..929175,929390..929549,929654..929776,929878..929942,930129..930225,930574..930665,930746..930917,931038..931246,931538..931627,931708..931792,931872..932063,932320..932478))
location: region:927787-932478:-1
so has part: feature:932320-932478:-1:exon
so has part: feature:931872-932063:-1:exon
so has part: feature:931708-931792:-1:exon
so has part: feature:931538-931627:-1:exon
so has part: feature:931038-931246:-1:exon
so has part: feature:930746-930917:-1:exon
so has part: feature:930574-930665:-1:exon
so has part: feature:930129-930225:-1:exon
so has part: feature:929878-929942:-1:exon
so has part: feature:929654-929776:-1:exon
so has part: feature:929390-929549:-1:exon
so has part: feature:929069-929175:-1:exon
so has part: feature:928751-928846:-1:exon
so has part: feature:928436-928621:-1:exon
so has part: feature:928247-928357:-1:exon
so has part: feature:927787-927903:-1:exon

XP_030811858.1
type: Protein
SIO_000068: ncbiprotein

position:927787:-1
position: 927787
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:932478:-1
position: 932478
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:932320-932478:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:931872-932063:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:931708-931792:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:931538-931627:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:931038-931246:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:930746-930917:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:930574-930665:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:930129-930225:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:929878-929942:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:929654-929776:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:929390-929549:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:929069-929175:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:928751-928846:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:928436-928621:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:928247-928357:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:927787-927903:-1:exon

UTP4
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 87175
gene: UTP4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: U3 small nucleolar RNA-associated protein 4 homolog isoform X1
translation: MGEFEVHRVRFFGLVPAGVRCLACHPRGTRLALARTDGAVEVYNFSANYFQEKVIPGHEARSVESLCWAAGDRLFGAGLGGDITEYDLSGLSAARGLDGGGGPIWSMVANSTGTQLAIGCEDGSVKIFQVVPGGIQFERNLDRRKGRVLCLSWHPSDTHIVAGSIDFFRVINVTSGQTVQRIMVNHRVEKAKRECVVWAIALLSSGTVVSADSFGRVQFWDWEQGTLAESHTVSTSAVLSLAVSQKEDSMIVGTSTGATYHLQLLPVRLGGLEKRWVRTKPFQFHSHDVRAVAHSPTALISGGLDAQLVIRPLMEKVQKKSYDAALRKFTFPHRRLVSCARKARLLLFQFSQYLELWRLGSTEETGKDGEVLPLCRMPEHLVQLKSKGPEHIYCSCVSPCGTWLGYSTASRFQLYRVRCDGDGVSLRKVPKVPKLLPPAYQLQFSADSESLFVASARGSVHVLQLLEPGGCKHLHTLRPPSGCSEAVYLLAPSADGHWLAAVTGDWAIHIYNLKCFKHHCVVPNYDCAVSALAIHPSTNNLVIAYSDQQLFEFSIPEKQYTSWSRAVQSRGLHRAWLERDSPITHITFNPKNPSHILLHDTYLLCVLDKSLVSGREGRGCRGLLQSLTRAVPAALPQPLPDDSALLMNQSTLKQLPETARKRQLHAFKICKKFQPLLFMDLLDKNCLVVVERPIMDFKTQLPLPVQQKKFGT
SIO_010081: UTP4
subclass of: SO_0000673
so part of: UTP4
location: complement(join(927787..927903,928247..928621,928751..928846,929069..929175,929390..929549,929654..929776,929878..929942,930129..930225,930574..930665,930746..930917,931038..931246,931538..931627,931708..931792,931872..932063,932320..932478))
location: region:927787-932478:-1
so has part: feature:932320-932478:-1:exon
so has part: feature:931872-932063:-1:exon
so has part: feature:931708-931792:-1:exon
so has part: feature:931538-931627:-1:exon
so has part: feature:931038-931246:-1:exon
so has part: feature:930746-930917:-1:exon
so has part: feature:930574-930665:-1:exon
so has part: feature:930129-930225:-1:exon
so has part: feature:929878-929942:-1:exon
so has part: feature:929654-929776:-1:exon
so has part: feature:929390-929549:-1:exon
so has part: feature:929069-929175:-1:exon
so has part: feature:928751-928846:-1:exon
so has part: feature:928247-928621:-1:exon
so has part: feature:927787-927903:-1:exon

XP_030811857.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:932320-932478:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:931872-932063:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:931708-931792:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:931538-931627:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:931038-931246:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:930746-930917:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:930574-930665:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:930129-930225:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:929878-929942:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:929654-929776:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:929390-929549:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:929069-929175:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:928751-928846:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:928247-928621:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:927787-927903:-1:exon

CHTF8
type: Gene
subclass of: SO_0000704
RO_0002162: 87175
gene: CHTF8
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 932617..934940
location: region:932617-934940:1
so has part: feature:932617-934940:1:exon
subclass of: SO_0000010

115907808
type: Gene
SIO_000068: ncbigene

position:932617:1
position: 932617
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:934940:1
position: 934940
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:932617-934940:1:exon

CHTF8
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 87175
gene: CHTF8
product: chromosome transmission fidelity factor 8
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_030955947.1
SIO_010081: CHTF8
subclass of: SO_0000673
so part of: CHTF8
location: join(932617..932636,933195..933225,933298..933415,933484..934940)
location: region:932617-934940:1
so has part: feature:932617-932636:1:exon
so has part: feature:933195-933225:1:exon
so has part: feature:933298-933415:1:exon
so has part: feature:933484-934940:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:932617-932636:1:exon

position:932636:1
position: 932636
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:933195-933225:1:exon

position:933195:1
position: 933195
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:933225:1
position: 933225
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:933298-933415:1:exon

position:933298:1
position: 933298
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:933415:1
position: 933415
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:933484-934940:1:exon

position:933484:1
position: 933484
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

CHTF8
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 87175
gene: CHTF8
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: chromosome transmission fidelity protein 8 homolog
translation: MVQIVISSGGTGALAQWVLLELQGEVEPRQSGQLPGSLLGDLHYTCEGVPVLIVGHHILYGKVVQLEKPFAVLVKQGGASQPSPMGPHSHYTVTALIKTKLLFKTRPKPIITHVPKKV
SIO_010081: CHTF8
subclass of: SO_0000673
so part of: CHTF8
location: join(933203..933225,933298..933415,933484..933699)
location: region:933203-933699:1
so has part: feature:933203-933225:1:exon
so has part: feature:933298-933415:1:exon
so has part: feature:933484-933699:1:exon

XP_030811807.1
type: Protein
SIO_000068: ncbiprotein

position:933203:1
position: 933203
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:933699:1
position: 933699
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:933203-933225:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:933298-933415:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:933484-933699:1:exon

HAS3
type: Gene
subclass of: SO_0000704
RO_0002162: 87175
gene: HAS3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(934204..938243)
location: region:934204-938243:-1
so has part: feature:934204-938243:-1:exon
subclass of: SO_0000010

115907807
type: Gene
SIO_000068: ncbigene

position:934204:-1
position: 934204
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:938243:-1
position: 938243
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:934204-938243:-1:exon

HAS3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 87175
gene: HAS3
product: hyaluronan synthase 3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, 29 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_030955946.1
SIO_010081: HAS3
subclass of: SO_0000673
so part of: HAS3
location: complement(join(934204..936154,936236..936337,936859..937479,938217..938243))
location: region:934204-938243:-1
so has part: feature:938217-938243:-1:exon
so has part: feature:936859-937479:-1:exon
so has part: feature:936236-936337:-1:exon
so has part: feature:934204-936154:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:938217-938243:-1:exon

position:938217:-1
position: 938217
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:936859-937479:-1:exon

position:936859:-1
position: 936859
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:937479:-1
position: 937479
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:936236-936337:-1:exon

position:936236:-1
position: 936236
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:936337:-1
position: 936337
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:934204-936154:-1:exon

position:936154:-1
position: 936154
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

HAS3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 87175
gene: HAS3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: hyaluronan synthase 3
translation: MPGSLSTALRVVGTSLFAVAVLGGILAAYVTGYQFIHTEKHYLSFGLYGAILGLHLFIQSLFAFLEHRRMRGEGQPVRPGRSVALCIAAFQEDPDYLTKCLRSVKRIAFPDLKVVMVVDGNGPDDTYMLDIFHNVMGSEHSGSYIWRSNFHAWGEGETEAGLREGLARVQALVRSNTYSCILQKWGGKREVMYTAFRALGDSVDYIQVCDSDTVLDPACTAEMLRILEADPHVGGVGGDVQILNKYDSWLSFLSSVRYWMAFNVERACQSYFGCVQCISGPLGMYRNALLQQFLEDWYHQTFLGSKCSFGDDRHLTNRVLSLGYRTKYTARSKCLTETPTRYLRWLNQQTRWSKSYFREWLYNALWFHKHHLWMTYESVVTGFFPFFLIATVIQLFYRGRVWNILLFLLTVQLVGVIKATYACFLRGSAEMIFMSLYALLYMSSLLPAKIFAIATINKSGWGTSGRRTIVVNFVGLLPVSVWVAVLLGGLAYTAYSQDLFSETEVAFLVSGAILYACYWVALLTLYLAIIARRCGKRQEQCGLVFTEV
SIO_010081: HAS3
subclass of: SO_0000673
so part of: HAS3
location: complement(join(935231..936154,936236..936337,936859..937479))
location: region:935231-937479:-1
so has part: feature:936859-937479:-1:exon
so has part: feature:936236-936337:-1:exon
so has part: feature:935231-936154:-1:exon

XP_030811806.1
type: Protein
SIO_000068: ncbiprotein

position:935231:-1
position: 935231
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:936859-937479:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:936236-936337:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:935231-936154:-1:exon

TANGO6
type: Gene
subclass of: SO_0000704
RO_0002162: 87175
gene: TANGO6
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(939734..960088)
location: region:939734-960088:-1
so has part: feature:939734-960088:-1:exon
subclass of: SO_0000010

115908048
type: Gene
SIO_000068: ncbigene

position:939734:-1
position: 939734
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:960088:-1
position: 960088
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:939734-960088:-1:exon

TANGO6
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 87175
gene: TANGO6
product: transport and golgi organization 6 homolog
exception: unclassified transcription discrepancy
note: The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: deleted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 85% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_030956341.1
SIO_010081: TANGO6
subclass of: SO_0000673
so part of: TANGO6
location: complement(join(939734..940168,940796..940909,941840..941991,944086..944238,945622..945679,945865..946314,947585..947719,950350..950529,951059..951185,952719..952895,954159..954271,955818..955900,956412..956574,957034..957158,957853..957971,958683..958828,959030..959805,960019..960088))
location: region:939734-960088:-1
so has part: feature:960019-960088:-1:exon
so has part: feature:959030-959805:-1:exon
so has part: feature:958683-958828:-1:exon
so has part: feature:957853-957971:-1:exon
so has part: feature:957034-957158:-1:exon
so has part: feature:956412-956574:-1:exon
so has part: feature:955818-955900:-1:exon
so has part: feature:954159-954271:-1:exon
so has part: feature:952719-952895:-1:exon
so has part: feature:951059-951185:-1:exon
so has part: feature:950350-950529:-1:exon
so has part: feature:947585-947719:-1:exon
so has part: feature:945865-946314:-1:exon
so has part: feature:945622-945679:-1:exon
so has part: feature:944086-944238:-1:exon
so has part: feature:941840-941991:-1:exon
so has part: feature:940796-940909:-1:exon
so has part: feature:939734-940168:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:960019-960088:-1:exon

position:960019:-1
position: 960019
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:959030-959805:-1:exon

position:959030:-1
position: 959030
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:959805:-1
position: 959805
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:958683-958828:-1:exon

position:958683:-1
position: 958683
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:958828:-1
position: 958828
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:957853-957971:-1:exon

position:957853:-1
position: 957853
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:957971:-1
position: 957971
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:957034-957158:-1:exon

position:957034:-1
position: 957034
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:957158:-1
position: 957158
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:956412-956574:-1:exon

position:956412:-1
position: 956412
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:956574:-1
position: 956574
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:955818-955900:-1:exon

position:955818:-1
position: 955818
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:955900:-1
position: 955900
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:954159-954271:-1:exon

position:954159:-1
position: 954159
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:954271:-1
position: 954271
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:952719-952895:-1:exon

position:952719:-1
position: 952719
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:952895:-1
position: 952895
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:951059-951185:-1:exon

position:951059:-1
position: 951059
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:951185:-1
position: 951185
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:950350-950529:-1:exon

position:950350:-1
position: 950350
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:950529:-1
position: 950529
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:947585-947719:-1:exon

position:947585:-1
position: 947585
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:947719:-1
position: 947719
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:945865-946314:-1:exon

position:945865:-1
position: 945865
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:946314:-1
position: 946314
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:945622-945679:-1:exon

position:945622:-1
position: 945622
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:945679:-1
position: 945679
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:944086-944238:-1:exon

position:944086:-1
position: 944086
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:944238:-1
position: 944238
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:941840-941991:-1:exon

position:941840:-1
position: 941840
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:941991:-1
position: 941991
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:940796-940909:-1:exon

position:940796:-1
position: 940796
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:940909:-1
position: 940909
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:939734-940168:-1:exon

position:940168:-1
position: 940168
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

TANGO6
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 87175
gene: TANGO6
exception: unclassified translation discrepancy
note: The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: deleted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: LOW QUALITY PROTEIN: transport and Golgi organization protein 6 homolog
translation: MDHGTPLVTGRDTFGYPGLLQPAYGGSRAAPPLSPSPPWRPAAAPPLPCPPQHGGAHRQRSGHGGRRAAGPEPARVMEALELLLGPPADGDSAAEPGKEPALCPETLRRNAAALEERLCRAAGWAALRQLRAAVLCRAPALAAGAAGAEPGWAAACGLLALLLCLKERLAALAAAPAAPAGPGAPPPPGADTLSVGQERAVRRALRAAVGLGLLPHLPPGLGPGPGLGPPPGSRGARLFAAAAALVELARLPALGAPLLARHLRLLLCGLCALGHGPAALCQGVSDAERAQCREALRDILDRVYQPRAVQELLVLQGQPKQVPGAIPDTGLGPGAAPGWLRRLCGHLLSERLLRPGGVQAVVRGVLEGTDGGAGAEAAALDWRKCDAVGKILAACPQQCLSLEDYYRQVCPQILDLLHVQDKVAARQLQRVATTTVLSMAREQPQLAERHLLQPLLAPLRRCSAATELALEDLTAGAVLVPEAELGSCVEDVLKVYVVGNDSSSLLLGSLQPVLGVVFSLHSFARQNVSYLRSPCQDILLWFLEKAEREQSLAVLEGLAGLSSHVPTLHPQCQLQVGSEGGAAVVLQETISDEDEALYQKISLEQCHVESLVELLSHCQKSGLAGDFFIHCLKELTQVAAEDEAAPNPAVEPGGTLLELEQDQARQGRKLLVLQLVAALCQGVSDTVFTDIEQVQQFLAAVLQRACAHPARGPGAAAEAQTLAMAMALVAAVLGGAVQLKSSDFAVLKRLVPLLEELSRSYPEPLTQELASDLRIAILTHGACSPGTLGTAAHGLLGTQPGTAARSPAGRAPSPPAHRDSSTGQSRGREPGASPAPRAHSLAPGGLQELLLSACDPQPPGRAAALRRLASLVTQRDPEAIRLQEKLLQVFLENLQHEDAFVYLSAIQGVALLSSEYPERILPVLLAQYERPAQGKEDTMAAVTRMKLGEVLMRVTRALGDMVFGHREPLIRAFLRGARDPDGALRASSLSNLGELCQHLGFQLGSIVQEVTCCVTAIARTDPEAEVRRAAVHVVVLLLRGLSEKVTEVLRDVLRDLYRLLKHVATAERDAATVLHAQLALEELDAAMRRVLFPPQTLEKKIVVLP
SIO_010081: TANGO6
subclass of: SO_0000673
so part of: TANGO6
location: complement(join(939991..940168,940796..940909,941840..941991,944086..944238,945622..945679,945865..946314,947585..947719,950350..950529,951059..951185,952719..952895,954159..954271,955818..955900,956412..956574,957034..957158,957853..957971,958683..958828,959030..959805,960019..960088))
location: region:939991-960088:-1
so has part: feature:960019-960088:-1:exon
so has part: feature:959030-959805:-1:exon
so has part: feature:958683-958828:-1:exon
so has part: feature:957853-957971:-1:exon
so has part: feature:957034-957158:-1:exon
so has part: feature:956412-956574:-1:exon
so has part: feature:955818-955900:-1:exon
so has part: feature:954159-954271:-1:exon
so has part: feature:952719-952895:-1:exon
so has part: feature:951059-951185:-1:exon
so has part: feature:950350-950529:-1:exon
so has part: feature:947585-947719:-1:exon
so has part: feature:945865-946314:-1:exon
so has part: feature:945622-945679:-1:exon
so has part: feature:944086-944238:-1:exon
so has part: feature:941840-941991:-1:exon
so has part: feature:940796-940909:-1:exon
so has part: feature:939991-940168:-1:exon

XP_030812201.1
type: Protein
SIO_000068: ncbiprotein

position:939991:-1
position: 939991
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:960019-960088:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:959030-959805:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:958683-958828:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:957853-957971:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:957034-957158:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:956412-956574:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:955818-955900:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:954159-954271:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:952719-952895:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:951059-951185:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:950350-950529:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:947585-947719:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:945865-946314:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:945622-945679:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:944086-944238:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:941840-941991:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:940796-940909:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:939991-940168:-1:exon

CDH1
type: Gene
subclass of: SO_0000704
RO_0002162: 87175
gene: CDH1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(960439..968752)
location: region:960439-968752:-1
so has part: feature:960439-968752:-1:exon
subclass of: SO_0000010

115907950
type: Gene
SIO_000068: ncbigene

position:960439:-1
position: 960439
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:968752:-1
position: 968752
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:960439-968752:-1:exon

CDH1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 87175
gene: CDH1
product: cadherin 1
exception: unclassified transcription discrepancy
note: The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: deleted 2 bases in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, 33 Proteins, and 94% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_030956187.1
SIO_010081: CDH1
subclass of: SO_0000673
so part of: CDH1
location: complement(join(960439..961146,961243..961386,961481..961611,961697..961918,962420..962647,962729..962871,962977..963221,963301..963491,963595..963723,964092..964264,964380..964524,964605..964760,964852..964983,965084..965313,968353..968467,968581..968752))
location: region:960439-968752:-1
so has part: feature:968581-968752:-1:exon
so has part: feature:968353-968467:-1:exon
so has part: feature:965084-965313:-1:exon
so has part: feature:964852-964983:-1:exon
so has part: feature:964605-964760:-1:exon
so has part: feature:964380-964524:-1:exon
so has part: feature:964092-964264:-1:exon
so has part: feature:963595-963723:-1:exon
so has part: feature:963301-963491:-1:exon
so has part: feature:962977-963221:-1:exon
so has part: feature:962729-962871:-1:exon
so has part: feature:962420-962647:-1:exon
so has part: feature:961697-961918:-1:exon
so has part: feature:961481-961611:-1:exon
so has part: feature:961243-961386:-1:exon
so has part: feature:960439-961146:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:968581-968752:-1:exon

position:968581:-1
position: 968581
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:968353-968467:-1:exon

position:968353:-1
position: 968353
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:968467:-1
position: 968467
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:965084-965313:-1:exon

position:965084:-1
position: 965084
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:965313:-1
position: 965313
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:964852-964983:-1:exon

position:964852:-1
position: 964852
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:964983:-1
position: 964983
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:964605-964760:-1:exon

position:964605:-1
position: 964605
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:964760:-1
position: 964760
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:964380-964524:-1:exon

position:964380:-1
position: 964380
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:964524:-1
position: 964524
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:964092-964264:-1:exon

position:964092:-1
position: 964092
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:964264:-1
position: 964264
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:963595-963723:-1:exon

position:963595:-1
position: 963595
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:963723:-1
position: 963723
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:963301-963491:-1:exon

position:963301:-1
position: 963301
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:963491:-1
position: 963491
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:962977-963221:-1:exon

position:962977:-1
position: 962977
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:963221:-1
position: 963221
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:962729-962871:-1:exon

position:962729:-1
position: 962729
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:962871:-1
position: 962871
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:962420-962647:-1:exon

position:962420:-1
position: 962420
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:962647:-1
position: 962647
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:961697-961918:-1:exon

position:961697:-1
position: 961697
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:961918:-1
position: 961918
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:961481-961611:-1:exon

position:961481:-1
position: 961481
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:961611:-1
position: 961611
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:961243-961386:-1:exon

position:961243:-1
position: 961243
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:961386:-1
position: 961386
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:960439-961146:-1:exon

position:961146:-1
position: 961146
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

CDH1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 87175
gene: CDH1
exception: unclassified translation discrepancy
note: The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: deleted 2 bases in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: LOW QUALITY PROTEIN: cadherin-1
translation: MGRRAGCSVPLCLLLLLLQSGQRLCQRAASCQPGFAAETFALTVPRDSVAAGRALGRVSFVDCGESHRAAFLPDDTRFKVSRDGTVTATRPLQLQQRDITFAVHTWDTVGKRHSAKVTLRQRRHQHRHHERMQQGTVPDVLIFPEHGHGLRRHKRDWVIPPINCPENERGPFPKKLVQIKSNKDKETKVFYSITGQGADTIPVGVFIIERETGWLEVTKPLDREEKDKYVLYSHAVSANGQPVEDPMEIIITVTDQNDNRPVFTQQVFVGYIEENAKPGTSVMTVNATDADDAINVNNGIIGYSILSEEPKGAQDMFTINAENGIISVIGTGLDRETTPNYTLIIQAADQEGFGLTNTATAIIKVTDANDNPPVFDPATYETSVAENEVGVVVARLHVTDQDLPGSPAWQAVYHIRSFGDPQGDFEITTDPKTNDGLLKTAKGLDYEAQDRYRLVVSVENQAPFTVPLNPATANVLVVVRDVNEAPIFVPPVKRVEVMEDVPVGYQVTSYTAQDPDKDQRQKITYRMGSDPAGWLAIDPENGIVTAAQPLDRESAHAINSTYKAIILAVDNGSPNYATGTGTLLLVLQDVNDNGPVPEPRSFDICNRQPEEQMLKIIDKDLPPNTHPFKAELMHGSGSNWTASVVQPDEVKLSMKKELEPGEYSIFLKLLDAQGKDQITAVRAQVCSCEGPAKNCERRAYISGGMGVPAILGILGGILALLILLLLLLLFVRRRKVEKEPLLPPEDDMRDNVYHYDEEGGGEEDQDYDLSQLHRGLDARPEVIRNDVAPPLMAAPQYRPRPANPDEIGNFIDENLKAADTDPTAPPYDSLLVFDYEGSGSEATSLSSLNSSASDGDQDYDYLNDWGGRFRKLAELYGGGEEDD
SIO_010081: CDH1
subclass of: SO_0000673
so part of: CDH1
location: complement(join(960934..961146,961243..961386,961481..961611,961697..961918,962420..962647,962729..962871,962977..963221,963301..963491,963595..963723,964092..964264,964380..964524,964605..964760,964852..964983,965084..965313,968353..968467,968581..968637))
location: region:960934-968637:-1
so has part: feature:968581-968637:-1:exon
so has part: feature:968353-968467:-1:exon
so has part: feature:965084-965313:-1:exon
so has part: feature:964852-964983:-1:exon
so has part: feature:964605-964760:-1:exon
so has part: feature:964380-964524:-1:exon
so has part: feature:964092-964264:-1:exon
so has part: feature:963595-963723:-1:exon
so has part: feature:963301-963491:-1:exon
so has part: feature:962977-963221:-1:exon
so has part: feature:962729-962871:-1:exon
so has part: feature:962420-962647:-1:exon
so has part: feature:961697-961918:-1:exon
so has part: feature:961481-961611:-1:exon
so has part: feature:961243-961386:-1:exon
so has part: feature:960934-961146:-1:exon

XP_030812047.1
type: Protein
SIO_000068: ncbiprotein

position:960934:-1
position: 960934
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:968637:-1
position: 968637
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:968581-968637:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:968353-968467:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:965084-965313:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:964852-964983:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:964605-964760:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:964380-964524:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:964092-964264:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:963595-963723:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:963301-963491:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:962977-963221:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:962729-962871:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:962420-962647:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:961697-961918:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:961481-961611:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:961243-961386:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:960934-961146:-1:exon

CDH3
type: Gene
subclass of: SO_0000704
RO_0002162: 87175
gene: CDH3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(969704..975586)
location: region:969704-975586:-1
so has part: feature:969704-975586:-1:exon
subclass of: SO_0000010

115907975
type: Gene
SIO_000068: ncbigene

position:969704:-1
position: 969704
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:975586:-1
position: 975586
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:969704-975586:-1:exon

CDH3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 87175
gene: CDH3
product: cadherin 3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 1 EST, 47 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_030956224.1
SIO_010081: CDH3
subclass of: SO_0000673
so part of: CDH3
location: complement(join(969704..970112,970194..970337,970417..970547,970635..970853,970957..971181,971512..971654,971737..971981,972068..972253,972331..972459,972543..972718,972831..972975,973052..973207,973301..973411,973485..973681,975393..975586))
location: region:969704-975586:-1
so has part: feature:975393-975586:-1:exon
so has part: feature:973485-973681:-1:exon
so has part: feature:973301-973411:-1:exon
so has part: feature:973052-973207:-1:exon
so has part: feature:972831-972975:-1:exon
so has part: feature:972543-972718:-1:exon
so has part: feature:972331-972459:-1:exon
so has part: feature:972068-972253:-1:exon
so has part: feature:971737-971981:-1:exon
so has part: feature:971512-971654:-1:exon
so has part: feature:970957-971181:-1:exon
so has part: feature:970635-970853:-1:exon
so has part: feature:970417-970547:-1:exon
so has part: feature:970194-970337:-1:exon
so has part: feature:969704-970112:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:975393-975586:-1:exon

position:975393:-1
position: 975393
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:973485-973681:-1:exon

position:973485:-1
position: 973485
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:973681:-1
position: 973681
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:973301-973411:-1:exon

position:973301:-1
position: 973301
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:973411:-1
position: 973411
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:973052-973207:-1:exon

position:973052:-1
position: 973052
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:973207:-1
position: 973207
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:972831-972975:-1:exon

position:972831:-1
position: 972831
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:972975:-1
position: 972975
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:972543-972718:-1:exon

position:972543:-1
position: 972543
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:972718:-1
position: 972718
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:972331-972459:-1:exon

position:972331:-1
position: 972331
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:972459:-1
position: 972459
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:972068-972253:-1:exon

position:972068:-1
position: 972068
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:972253:-1
position: 972253
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:971737-971981:-1:exon

position:971737:-1
position: 971737
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:971981:-1
position: 971981
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:971512-971654:-1:exon

position:971512:-1
position: 971512
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:971654:-1
position: 971654
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:970957-971181:-1:exon

position:970957:-1
position: 970957
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:971181:-1
position: 971181
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:970635-970853:-1:exon

position:970635:-1
position: 970635
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:970853:-1
position: 970853
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:970417-970547:-1:exon

position:970417:-1
position: 970417
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:970547:-1
position: 970547
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:970194-970337:-1:exon

position:970194:-1
position: 970194
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:970337:-1
position: 970337
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:969704-970112:-1:exon

position:970112:-1
position: 970112
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

CDH3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 87175
gene: CDH3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: cadherin-3
translation: MRGPRSGLCPLSIFILLVLSPLLPAAALSPAPPCALPGLRRGPLPAPGSSGGCAGPYSTEEPDVGVREDGGPVRLPGAGRALAVPPRDAGSPRYAAGQPEPAPAPAESRRSPQELPRARAALRRQKRDWVIPPIKVPENERGPFPKKLVQIKSNRDRDTKIFYSITGQGADAPPEGIFTIEKESGWMKVTQPLDREHIDKYHLFSHAVSENGKPVEEPMEIIVTVTDQNDNKPQFTQEVFRGSVPEGALPGTSIMQVTATDADDAVETYNGVIAYSILSQEPREPHPQMFTVNRATGTLSVIASGLDRERVREYTLTVQAADLDGEGLTTTALAVIEIADVNDNAPEFDPKTYEAAVPENVAGREVARLAVTDLDEPGTPAWRAVYSILRGNDGGAFAISTNPATNEGILRTAQGLDYEAKQQFVLHVAVANEVPFVVKLPMATATVTVTVEDVNEAPVFVPPVQLATVSEDVPPGQTLTACTAQDPDKAQGQRIKYVVGHDPAGWLAVHPENGLVTARDHLDRESPFVKNSTYMAVLLAVDDGSPPATGTGTLLLTLLDVNDNGPEAEPRDITVCQRSPQPQLLTVTDRDLPPNTGPFRAELTHGSGDSWAVEVGDTGDTVTLQLVAPLEPDTYSVYLRLLDQPGRAQVTIVTARVCACEGQAQGCPQKSQPATALPFVLATLGALLALLLILLLLLLFVRRRKVTKEPLLLPEDDTRDNIFYYGEEGGGEEDQNYDLRQLHRGLDARPEVIRNDVAPTLLPAPQYRPRPANPDDIGTFIEENLKAADTDPTAPPYDSLLVFDYEGSGSEATSLSSLNSSASDGDQDYDYLNDWGGRFRKLAELYGGGEEDD
SIO_010081: CDH3
subclass of: SO_0000673
so part of: CDH3
location: complement(join(969900..970112,970194..970337,970417..970547,970635..970853,970957..971181,971512..971654,971737..971981,972068..972253,972331..972459,972543..972718,972831..972975,973052..973207,973301..973411,973485..973681,975393..975534))
location: region:969900-975534:-1
so has part: feature:975393-975534:-1:exon
so has part: feature:973485-973681:-1:exon
so has part: feature:973301-973411:-1:exon
so has part: feature:973052-973207:-1:exon
so has part: feature:972831-972975:-1:exon
so has part: feature:972543-972718:-1:exon
so has part: feature:972331-972459:-1:exon
so has part: feature:972068-972253:-1:exon
so has part: feature:971737-971981:-1:exon
so has part: feature:971512-971654:-1:exon
so has part: feature:970957-971181:-1:exon
so has part: feature:970635-970853:-1:exon
so has part: feature:970417-970547:-1:exon
so has part: feature:970194-970337:-1:exon
so has part: feature:969900-970112:-1:exon

XP_030812084.1
type: Protein
SIO_000068: ncbiprotein

position:969900:-1
position: 969900
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:975534:-1
position: 975534
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:975393-975534:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:973485-973681:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:973301-973411:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:973052-973207:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:972831-972975:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:972543-972718:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:972331-972459:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:972068-972253:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:971737-971981:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:971512-971654:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:970957-971181:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:970635-970853:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:970417-970547:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:970194-970337:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:969900-970112:-1:exon

LOC115908020
type: Gene
subclass of: SO_0000704
RO_0002162: 87175
gene: LOC115908020
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 978624..979412
location: region:978624-979412:1
so has part: feature:978624-979412:1:exon
subclass of: SO_0000010

115908020
type: Gene
SIO_000068: ncbigene

position:978624:1
position: 978624
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:979412:1
position: 979412
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:978624-979412:1:exon

LOC115908020
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 87175
gene: LOC115908020
product: 5-hydroxyisourate hydrolase-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 76% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_030956301.1
SIO_010081: LOC115908020
subclass of: SO_0000673
so part of: LOC115908020
location: join(978624..978839,979055..979190,979323..979412)
location: region:978624-979412:1
so has part: feature:978624-978839:1:exon
so has part: feature:979055-979190:1:exon
so has part: feature:979323-979412:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:978624-978839:1:exon

position:978839:1
position: 978839
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:979055-979190:1:exon

position:979055:1
position: 979055
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:979190:1
position: 979190
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:979323-979412:1:exon

position:979323:1
position: 979323
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC115908020
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 87175
gene: LOC115908020
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: 5-hydroxyisourate hydrolase-like
translation: MVLPGPVPALLSPVPQADGMSEVGKGTLTTHVLNTATGLPAAGLGVRLAQLQEPGLQWMELAHRHTDEDGRCQPLLAPGQARAGTYKLHFETAEYWQGLGHTSFYPFVEVVFIITDPAQKLHVPLLISPYSYTTYRGS
SIO_010081: LOC115908020
subclass of: SO_0000673
so part of: LOC115908020
location: join(978649..978839,979055..979190,979323..979412)
location: region:978649-979412:1
so has part: feature:978649-978839:1:exon
so has part: feature:979055-979190:1:exon
so has part: feature:979323-979412:1:exon

XP_030812161.1
type: Protein
SIO_000068: ncbiprotein

position:978649:1
position: 978649
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:978649-978839:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:979055-979190:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:979323-979412:1:exon

GAS8
type: Gene
subclass of: SO_0000704
RO_0002162: 87175
gene: GAS8
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(979495..986723)
location: region:979495-986723:-1
so has part: feature:979495-986723:-1:exon
subclass of: SO_0000010

115907850
type: Gene
SIO_000068: ncbigene

position:979495:-1
position: 979495
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:986723:-1
position: 986723
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:979495-986723:-1:exon

GAS8
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 87175
gene: GAS8
product: growth arrest specific 8
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, 10 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XM_030956024.1
SIO_010081: GAS8
subclass of: SO_0000673
so part of: GAS8
location: complement(join(979495..979851,980082..980147,981205..981414,982401..982487,982750..982917,983093..983298,983696..983750,984044..984250,984457..984654,986111..986191,986652..986723))
location: region:979495-986723:-1
so has part: feature:986652-986723:-1:exon
so has part: feature:986111-986191:-1:exon
so has part: feature:984457-984654:-1:exon
so has part: feature:984044-984250:-1:exon
so has part: feature:983696-983750:-1:exon
so has part: feature:983093-983298:-1:exon
so has part: feature:982750-982917:-1:exon
so has part: feature:982401-982487:-1:exon
so has part: feature:981205-981414:-1:exon
so has part: feature:980082-980147:-1:exon
so has part: feature:979495-979851:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:986652-986723:-1:exon

position:986652:-1
position: 986652
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:986111-986191:-1:exon

position:986111:-1
position: 986111
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:986191:-1
position: 986191
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:984457-984654:-1:exon

position:984457:-1
position: 984457
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:984654:-1
position: 984654
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:984044-984250:-1:exon

position:984044:-1
position: 984044
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:984250:-1
position: 984250
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:983696-983750:-1:exon

position:983696:-1
position: 983696
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:983750:-1
position: 983750
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:983093-983298:-1:exon

position:983093:-1
position: 983093
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:983298:-1
position: 983298
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:982750-982917:-1:exon

position:982750:-1
position: 982750
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:982917:-1
position: 982917
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:982401-982487:-1:exon

position:982401:-1
position: 982401
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:982487:-1
position: 982487
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:981205-981414:-1:exon

position:981205:-1
position: 981205
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:981414:-1
position: 981414
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:980082-980147:-1:exon

position:980082:-1
position: 980082
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:980147:-1
position: 980147
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:979495-979851:-1:exon

position:979851:-1
position: 979851
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

GAS8
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 87175
gene: GAS8
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: dynein regulatory complex subunit 4
translation: MGPKKKGKGGKGPAVVDGLDPDDMSKEQLLQHMMRLRQELDRERQERNSFQLECNRIQGYWEITRRELEERKAELRTRDREMEEAQERHQLEIKVYKQKVKHLLHEQQENLTELKAEGVLSLRRAQKDHWEQEEEMWKEKRSLSIRLKEQELANEAAISNLCLKHEEEMARLRSDFELQTKEMEAKYTRKMQALRDELDLQRKTEIHELEERKNTQISELIGNHEGAFGAIKNYYNDITAKNLTLINLLKEQVEELKKKEAVLEKEKADVVRENKGLAEPLHEAQELVAELQKKLVNYYRDKEALMNSKAHLKIAQKELKDLKWEHEVLEQRFSQVQEERDDLYQNFTRAINEVQQKTGYKNLLLERKLHGLLTLLEQKEVELSEVLAASNLDPSALSLVSHKLEDVLNSKNATIQDLQIQLARVCKAHNDMLQTFEAKLTAFGIPLDNLGFQPLSFPIPGQELGKGPAGLVSVPT
SIO_010081: GAS8
subclass of: SO_0000673
so part of: GAS8
location: complement(join(979702..979851,980082..980147,981205..981414,982401..982487,982750..982917,983093..983298,983696..983750,984044..984250,984457..984654,986111..986191,986652..986654))
location: region:979702-986654:-1
so has part: feature:986652-986654:-1:exon
so has part: feature:986111-986191:-1:exon
so has part: feature:984457-984654:-1:exon
so has part: feature:984044-984250:-1:exon
so has part: feature:983696-983750:-1:exon
so has part: feature:983093-983298:-1:exon
so has part: feature:982750-982917:-1:exon
so has part: feature:982401-982487:-1:exon
so has part: feature:981205-981414:-1:exon
so has part: feature:980082-980147:-1:exon
so has part: feature:979702-979851:-1:exon

XP_030811884.1
type: Protein
SIO_000068: ncbiprotein

position:979702:-1
position: 979702
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:986654:-1
position: 986654
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:986652-986654:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:986111-986191:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:984457-984654:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:984044-984250:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:983696-983750:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:983093-983298:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:982750-982917:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:982401-982487:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:981205-981414:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:980082-980147:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:979702-979851:-1:exon

DBNDD1
type: Gene
subclass of: SO_0000704
RO_0002162: 87175
gene: DBNDD1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 987176..990711
location: region:987176-990711:1
so has part: feature:987176-990711:1:exon
subclass of: SO_0000010

115907760
type: Gene
SIO_000068: ncbigene

position:987176:1
position: 987176
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:990711:1
position: 990711
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:987176-990711:1:exon

DBNDD1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 87175
gene: DBNDD1
product: dysbindin domain containing 1, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 10 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XM_030955868.1
SIO_010081: DBNDD1
subclass of: SO_0000673
so part of: DBNDD1
location: join(987176..987317,988265..988383,989377..989523,989895..990035,990123..990694)
location: region:987176-990694:1
so has part: feature:987176-987317:1:exon
so has part: feature:988265-988383:1:exon
so has part: feature:989377-989523:1:exon
so has part: feature:989895-990035:1:exon
so has part: feature:990123-990694:1:exon

position:990694:1
position: 990694
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:987176-987317:1:exon

position:987317:1
position: 987317
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:988265-988383:1:exon

position:988265:1
position: 988265
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:988383:1
position: 988383
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:989377-989523:1:exon

position:989377:1
position: 989377
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:989523:1
position: 989523
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:989895-990035:1:exon

position:989895:1
position: 989895
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:990035:1
position: 990035
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:990123-990694:1:exon

position:990123:1
position: 990123
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

DBNDD1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 87175
gene: DBNDD1
product: dysbindin domain containing 1, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 8 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_030955870.1
SIO_010081: DBNDD1
subclass of: SO_0000673
so part of: DBNDD1
location: join(987180..987317,989377..989523,989895..990035,990123..990711)
location: region:987180-990711:1
so has part: feature:987180-987317:1:exon
so has part: feature:989377-989523:1:exon
so has part: feature:989895-990035:1:exon
so has part: feature:990123-990711:1:exon

position:987180:1
position: 987180
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:987180-987317:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:989377-989523:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:989895-990035:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:990123-990711:1:exon

DBNDD1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 87175
gene: DBNDD1
product: dysbindin domain containing 1, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 10 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XM_030955869.1
SIO_010081: DBNDD1
subclass of: SO_0000673
so part of: DBNDD1
location: join(987216..987317,988269..988383,989377..989523,989895..990035,990123..990705)
location: region:987216-990705:1
so has part: feature:987216-987317:1:exon
so has part: feature:988269-988383:1:exon
so has part: feature:989377-989523:1:exon
so has part: feature:989895-990035:1:exon
so has part: feature:990123-990705:1:exon

position:987216:1
position: 987216
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:990705:1
position: 990705
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:987216-987317:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:988269-988383:1:exon

position:988269:1
position: 988269
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:989377-989523:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:989895-990035:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:990123-990705:1:exon

DBNDD1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 87175
gene: DBNDD1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: dysbindin domain-containing protein 1 isoform X2
translation: MAAPAAAGTGELGKEPLVPERPAGTPTHGPAQETPRVPAEEQGGIPIPSAGLLQVTERRQPLSSVSSLEVHFDLLDLTELTDMSDQELAEVFADSDEENAAGETPGGLQPPPPPRAGYLRSPSWTRAREQGRDKKHLSDPELPPGPPGPPDAFLPAERPREP
SIO_010081: DBNDD1
subclass of: SO_0000673
so part of: DBNDD1
location: join(987287..987317,989377..989523,989895..990035,990123..990292)
location: region:987287-990292:1
so has part: feature:987287-987317:1:exon
so has part: feature:989377-989523:1:exon
so has part: feature:989895-990035:1:exon
so has part: feature:990123-990292:1:exon

XP_030811730.1
type: Protein
SIO_000068: ncbiprotein

position:987287:1
position: 987287
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:990292:1
position: 990292
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:987287-987317:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:989377-989523:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:989895-990035:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:990123-990292:1:exon

DBNDD1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 87175
gene: DBNDD1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: dysbindin domain-containing protein 1 isoform X1
translation: MQAEARGEFCSREQRPELGKEPLVPERPAGTPTHGPAQETPRVPAEEQGGIPIPSAGLLQVTERRQPLSSVSSLEVHFDLLDLTELTDMSDQELAEVFADSDEENAAGETPGGLQPPPPPRAGYLRSPSWTRAREQGRDKKHLSDPELPPGPPGPPDAFLPAERPREP
SIO_010081: DBNDD1
subclass of: SO_0000673
so part of: DBNDD1
location: join(988335..988383,989377..989523,989895..990035,990123..990292)
location: region:988335-990292:1
so has part: feature:988335-988383:1:exon
so has part: feature:989377-989523:1:exon
so has part: feature:989895-990035:1:exon
so has part: feature:990123-990292:1:exon

XP_030811728.1
type: Protein
SIO_000068: ncbiprotein

position:988335:1
position: 988335
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:988335-988383:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:989377-989523:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:989895-990035:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:990123-990292:1:exon

DBNDD1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 87175
gene: DBNDD1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: dysbindin domain-containing protein 1 isoform X1
translation: MQAEARGEFCSREQRPELGKEPLVPERPAGTPTHGPAQETPRVPAEEQGGIPIPSAGLLQVTERRQPLSSVSSLEVHFDLLDLTELTDMSDQELAEVFADSDEENAAGETPGGLQPPPPPRAGYLRSPSWTRAREQGRDKKHLSDPELPPGPPGPPDAFLPAERPREP
SIO_010081: DBNDD1
subclass of: SO_0000673
so part of: DBNDD1
location: join(988335..988383,989377..989523,989895..990035,990123..990292)
location: region:988335-990292:1
so has part: feature:988335-988383:1:exon
so has part: feature:989377-989523:1:exon
so has part: feature:989895-990035:1:exon
so has part: feature:990123-990292:1:exon

XP_030811729.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:988335-988383:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:989377-989523:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:989895-990035:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:990123-990292:1:exon

DEF8
type: Gene
subclass of: SO_0000704
RO_0002162: 87175
gene: DEF8
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(990962..995705)
location: region:990962-995705:-1
so has part: feature:990962-995705:-1:exon
subclass of: SO_0000010

115907759
type: Gene
SIO_000068: ncbigene

position:990962:-1
position: 990962
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:995705:-1
position: 995705
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:990962-995705:-1:exon

DEF8
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 87175
gene: DEF8
product: differentially expressed in FDCP 8 homolog
exception: unclassified transcription discrepancy
note: The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: deleted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 10 Proteins, and 94% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XM_030955867.1
SIO_010081: DEF8
subclass of: SO_0000673
so part of: DEF8
location: complement(join(990962..991624,991704..991813,991904..992044,992289..992369,992705..992818,993162..993289,993746..993910,993981..994122,994334..994484,994563..994645,994756..994871,995666..995705))
location: region:990962-995705:-1
so has part: feature:995666-995705:-1:exon
so has part: feature:994756-994871:-1:exon
so has part: feature:994563-994645:-1:exon
so has part: feature:994334-994484:-1:exon
so has part: feature:993981-994122:-1:exon
so has part: feature:993746-993910:-1:exon
so has part: feature:993162-993289:-1:exon
so has part: feature:992705-992818:-1:exon
so has part: feature:992289-992369:-1:exon
so has part: feature:991904-992044:-1:exon
so has part: feature:991704-991813:-1:exon
so has part: feature:990962-991624:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:995666-995705:-1:exon

position:995666:-1
position: 995666
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:994756-994871:-1:exon

position:994756:-1
position: 994756
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:994871:-1
position: 994871
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:994563-994645:-1:exon

position:994563:-1
position: 994563
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:994645:-1
position: 994645
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:994334-994484:-1:exon

position:994334:-1
position: 994334
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:994484:-1
position: 994484
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:993981-994122:-1:exon

position:993981:-1
position: 993981
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:994122:-1
position: 994122
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:993746-993910:-1:exon

position:993746:-1
position: 993746
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:993910:-1
position: 993910
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:993162-993289:-1:exon

position:993162:-1
position: 993162
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:993289:-1
position: 993289
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:992705-992818:-1:exon

position:992705:-1
position: 992705
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:992818:-1
position: 992818
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:992289-992369:-1:exon

position:992289:-1
position: 992289
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:992369:-1
position: 992369
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:991904-992044:-1:exon

position:991904:-1
position: 991904
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:992044:-1
position: 992044
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:991704-991813:-1:exon

position:991704:-1
position: 991704
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:991813:-1
position: 991813
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:990962-991624:-1:exon

position:991624:-1
position: 991624
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

DEF8
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 87175
gene: DEF8
exception: unclassified translation discrepancy
note: The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: deleted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: LOW QUALITY PROTEIN: differentially expressed in FDCP 8 homolog
translation: MRARCRTVAMASDERLARFRQAHLNPFNKSPEQPERAEGEPPAPAQQADPPPGDPEGALDLGLAEDHFSRPVGLILASDVRQLRRAIEECKRVILALPEHSERQKDAVVRLIHLRLKLQELKDPGEDEPNIRVVLEHRFYKEKSKSVKQMCDKCSTIIWGLIQTWYTCTGCYYRCHSKCLPLVSRPCVRAQVSHQAEYQLSICPESGLDSQDYRCAECRAPISLRGVPSEARQCDYTGLYYCSSCHWNDLAVVPARAIHNWDFEPRKVSRCSMRYLALMVSRPVLKLREINPLLFNYVEELVEIRKLRQDILLMKPYFITCKEAMEARLLLQLQDRQHFVENDEMYSLQDLIDIEAGRLGCSLTEIHTLFAKHIKLDCERCQAKGFVCELCREGDVLFPFDSHTSVCADCSAVFHRDCYYDNSTTCPRCARLSLRKQSLFQDSGTEGEP
SIO_010081: DEF8
subclass of: SO_0000673
so part of: DEF8
location: complement(join(991522..991624,991704..991813,991904..992044,992289..992369,992705..992818,993162..993289,993746..993910,993981..994122,994334..994484,994563..994645,994756..994871,995666..995682))
location: region:991522-995682:-1
so has part: feature:995666-995682:-1:exon
so has part: feature:994756-994871:-1:exon
so has part: feature:994563-994645:-1:exon
so has part: feature:994334-994484:-1:exon
so has part: feature:993981-994122:-1:exon
so has part: feature:993746-993910:-1:exon
so has part: feature:993162-993289:-1:exon
so has part: feature:992705-992818:-1:exon
so has part: feature:992289-992369:-1:exon
so has part: feature:991904-992044:-1:exon
so has part: feature:991704-991813:-1:exon
so has part: feature:991522-991624:-1:exon

XP_030811727.1
type: Protein
SIO_000068: ncbiprotein

position:991522:-1
position: 991522
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:995682:-1
position: 995682
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:995666-995682:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:994756-994871:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:994563-994645:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:994334-994484:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:993981-994122:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:993746-993910:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:993162-993289:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:992705-992818:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:992289-992369:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:991904-992044:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:991704-991813:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:991522-991624:-1:exon

TUBB3
type: Gene
subclass of: SO_0000704
RO_0002162: 87175
gene: TUBB3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(996710..1001794)
location: region:996710-1001794:-1
so has part: feature:996710-1001794:-1:exon
subclass of: SO_0000010

115908049
type: Gene
SIO_000068: ncbigene

position:996710:-1
position: 996710
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1001794:-1
position: 1001794
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:996710-1001794:-1:exon

TUBB3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 87175
gene: TUBB3
product: tubulin beta 3 class III
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 mRNAs, 22 ESTs, 103 Proteins, and 63% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_030956342.1
SIO_010081: TUBB3
subclass of: SO_0000673
so part of: TUBB3
location: complement(join(996710..998004,998313..998423,999191..999299,999870..1000044,1000854..1001794))
location: region:996710-1001794:-1
so has part: feature:1000854-1001794:-1:exon
so has part: feature:999870-1000044:-1:exon
so has part: feature:999191-999299:-1:exon
so has part: feature:998313-998423:-1:exon
so has part: feature:996710-998004:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1000854-1001794:-1:exon

position:1000854:-1
position: 1000854
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:999870-1000044:-1:exon

position:999870:-1
position: 999870
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1000044:-1
position: 1000044
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:999191-999299:-1:exon

position:999191:-1
position: 999191
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:999299:-1
position: 999299
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:998313-998423:-1:exon

position:998313:-1
position: 998313
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:998423:-1
position: 998423
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:996710-998004:-1:exon

position:998004:-1
position: 998004
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

TUBB3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 87175
gene: TUBB3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: tubulin beta-3 chain
translation: MSTLAPLRLLREPSNASEGNHSNATVGAGGGWCQGLDIPNELFLALGLVSLVENLLVVAAILKNRNLHSPTYYFICCLAVSDMLVSISNLAEMLFMLLLEHGVLVMRPSIVRHMDSVIDTLICSSVVSSLSFLGVIAVDRYITIFYALRYHSIMTLQRAVVTMASVWLASTISSTVLIVYYRSNTILLCLIGFFLFMLVLMLVLYIHMFALARHHLHSISSQQKPPTAHRGGSLKGAVTLTILLGVFFICWGPFFFHLILIVTCPTNPFCTCFFSYFNLFLILIICNSVIDPLIYAFRSQELRRTLREVVTCSWMRRRPRRPRAPGAAPLRCRSAPGPSPLPSRPAPLRPGRTMREIVHIQAGQCGNQIGAKFWEVISDEHGIDPSGNYVGDSDLQLERISVYYNEASSHKYVPRAILVDLEPGTMDSVRSGAFGHLFRPDNFIFGQSGAGNNWAKGHYTEGAELVDSVLDVVRKECENCDCLQGFQLTHSLGGGTGSGMGTLLISKVREEYPDRIMNTFSVVPSPKVSDTVVEPYNATLSIHQLVENTDETYCIDNEALYDICFRTLKLATPTYGDLNHLVSATMSGVTTSLRFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTARGSQQYRALTVPELTQQMFDAKNMMAACDPRHGRYLTVATVFRGRMSMKEVDEQMLAIQSKNSSYFVEWIPNNVKVAVCDIPPRGLKMSSTFIGNSTAIQELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQDATAEEEGEMYEDDEEESEAQGAK
SIO_010081: TUBB3
subclass of: SO_0000673
so part of: TUBB3
location: complement(join(996929..998004,998313..998423,999191..999299,999870..1000044,1000854..1001794))
location: region:996929-1001794:-1
so has part: feature:1000854-1001794:-1:exon
so has part: feature:999870-1000044:-1:exon
so has part: feature:999191-999299:-1:exon
so has part: feature:998313-998423:-1:exon
so has part: feature:996929-998004:-1:exon

XP_030812202.1
type: Protein
SIO_000068: ncbiprotein

position:996929:-1
position: 996929
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1000854-1001794:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:999870-1000044:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:999191-999299:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:998313-998423:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:996929-998004:-1:exon

TCF25
type: Gene
subclass of: SO_0000704
RO_0002162: 87175
gene: TCF25
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1003635..1019519)
location: region:1003635-1019519:-1
so has part: feature:1003635-1019519:-1:exon
subclass of: SO_0000010

115907771
type: Gene
SIO_000068: ncbigene

position:1003635:-1
position: 1003635
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1019519:-1
position: 1019519
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1003635-1019519:-1:exon

TCF25
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 87175
gene: TCF25
product: transcription factor 25
exception: unclassified transcription discrepancy
note: The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: inserted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 10 ESTs, 6 Proteins, and 90% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XM_030955889.1
SIO_010081: TCF25
subclass of: SO_0000673
so part of: TCF25
location: complement(join(1003635..1003875,1004014..1004086,1004735..1004814,1005004..1005094,1005670..1005828,1006392..1006479,1007658..1007817,1008100..1008205,1008682..1008774,1009579..1009672,1009986..1010085,1012827..1012957,1013379..1013461,1014571..1014636,1015259..1015380,1016849..1016923,1018299..1018481,1019335..1019519))
location: region:1003635-1019519:-1
so has part: feature:1019335-1019519:-1:exon
so has part: feature:1018299-1018481:-1:exon
so has part: feature:1016849-1016923:-1:exon
so has part: feature:1015259-1015380:-1:exon
so has part: feature:1014571-1014636:-1:exon
so has part: feature:1013379-1013461:-1:exon
so has part: feature:1012827-1012957:-1:exon
so has part: feature:1009986-1010085:-1:exon
so has part: feature:1009579-1009672:-1:exon
so has part: feature:1008682-1008774:-1:exon
so has part: feature:1008100-1008205:-1:exon
so has part: feature:1007658-1007817:-1:exon
so has part: feature:1006392-1006479:-1:exon
so has part: feature:1005670-1005828:-1:exon
so has part: feature:1005004-1005094:-1:exon
so has part: feature:1004735-1004814:-1:exon
so has part: feature:1004014-1004086:-1:exon
so has part: feature:1003635-1003875:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1019335-1019519:-1:exon

position:1019335:-1
position: 1019335
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1018299-1018481:-1:exon

position:1018299:-1
position: 1018299
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1018481:-1
position: 1018481
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1016849-1016923:-1:exon

position:1016849:-1
position: 1016849
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1016923:-1
position: 1016923
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1015259-1015380:-1:exon

position:1015259:-1
position: 1015259
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1015380:-1
position: 1015380
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1014571-1014636:-1:exon

position:1014571:-1
position: 1014571
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1014636:-1
position: 1014636
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1013379-1013461:-1:exon

position:1013379:-1
position: 1013379
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1013461:-1
position: 1013461
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1012827-1012957:-1:exon

position:1012827:-1
position: 1012827
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1012957:-1
position: 1012957
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1009986-1010085:-1:exon

position:1009986:-1
position: 1009986
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1010085:-1
position: 1010085
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:1009579-1009672:-1:exon

position:1009579:-1
position: 1009579
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1009672:-1
position: 1009672
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:1008682-1008774:-1:exon

position:1008682:-1
position: 1008682
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1008774:-1
position: 1008774
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:1008100-1008205:-1:exon

position:1008100:-1
position: 1008100
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1008205:-1
position: 1008205
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:1007658-1007817:-1:exon

position:1007658:-1
position: 1007658
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1007817:-1
position: 1007817
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:1006392-1006479:-1:exon

position:1006392:-1
position: 1006392
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1006479:-1
position: 1006479
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:1005670-1005828:-1:exon

position:1005670:-1
position: 1005670
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1005828:-1
position: 1005828
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:1005004-1005094:-1:exon

position:1005004:-1
position: 1005004
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1005094:-1
position: 1005094
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:1004735-1004814:-1:exon

position:1004735:-1
position: 1004735
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1004814:-1
position: 1004814
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:1004014-1004086:-1:exon

position:1004014:-1
position: 1004014
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1004086:-1
position: 1004086
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:1003635-1003875:-1:exon

position:1003875:-1
position: 1003875
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

TCF25
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 87175
gene: TCF25
exception: unclassified translation discrepancy
note: The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: inserted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: LOW QUALITY PROTEIN: transcription factor 25
translation: MSRRALRRLGGEQRGQEGPGLGELGLGTDPGPERXREGGPPPAPGNRPRGPPRAAVSNRFELIPAEESEDEAAAGEERLSEQDPAGGSPEGSRDRSQQGAVTPSETHGDGQREGQEAEQPDRTLATSNKPRKKKKKRKTKKNSAGETVEDNDLEDIESLLERIEDPRLAPQSQGGVSTDSRPLLYVEHRNLNPENELKRYFGARAVLGDQRPRQRQRQYVRSMWLTAPKNTWPRYSKTGITMQLLDTRRGVQHFTFEHHREYQQVQFKFLDAVESMDPNNIVLLLQMNPYHVDSLLQLSDVCRMQEDQEMARDLIERALYSLECAFHPVFSLTSGSCRLDYRRPENRAFFLALFKHLMFLEKRGCPRTALEFCKLILSLDPEDDPLCVLLMIDFLSLRAREYSFLTRLFQEWESHRNLSQLPNFAFSVPLAYFLLSQQEERPELERSQARERAAQLIQLALIMFPSVLMPLLDHCSVQPDARVASHPFFGLNAQISQSPALNQLTSLYVGRTHALWKDPAVMAWLEPHAHEVLRMVDARDALVQEAEHKRKIRYQSAPRNIYRHIILSEMKEATAALPLEVTSQPVMGFDPLPPLDSIVSYTRPERTSHPSNESTLSLFFRSLLPNFNLQGDMRHDGDDEAGAAQDLNQGVNRLMAAMRDMLANIQFQEPPREDNPEGDGDWD
SIO_010081: TCF25
subclass of: SO_0000673
so part of: TCF25
location: complement(join(1003714..1003875,1004014..1004086,1004735..1004814,1005004..1005094,1005670..1005828,1006392..1006479,1007658..1007817,1008100..1008205,1008682..1008774,1009579..1009672,1009986..1010085,1012827..1012957,1013379..1013461,1014571..1014636,1015259..1015380,1016849..1016923,1018299..1018481,1019335..1019519))
location: region:1003714-1019519:-1
so has part: feature:1019335-1019519:-1:exon
so has part: feature:1018299-1018481:-1:exon
so has part: feature:1016849-1016923:-1:exon
so has part: feature:1015259-1015380:-1:exon
so has part: feature:1014571-1014636:-1:exon
so has part: feature:1013379-1013461:-1:exon
so has part: feature:1012827-1012957:-1:exon
so has part: feature:1009986-1010085:-1:exon
so has part: feature:1009579-1009672:-1:exon
so has part: feature:1008682-1008774:-1:exon
so has part: feature:1008100-1008205:-1:exon
so has part: feature:1007658-1007817:-1:exon
so has part: feature:1006392-1006479:-1:exon
so has part: feature:1005670-1005828:-1:exon
so has part: feature:1005004-1005094:-1:exon
so has part: feature:1004735-1004814:-1:exon
so has part: feature:1004014-1004086:-1:exon
so has part: feature:1003714-1003875:-1:exon

XP_030811749.1
type: Protein
SIO_000068: ncbiprotein

position:1003714:-1
position: 1003714
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1019335-1019519:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1018299-1018481:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1016849-1016923:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1015259-1015380:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1014571-1014636:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1013379-1013461:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1012827-1012957:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1009986-1010085:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1009579-1009672:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1008682-1008774:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1008100-1008205:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1007658-1007817:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1006392-1006479:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1005670-1005828:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1005004-1005094:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1004735-1004814:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1004014-1004086:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:1003714-1003875:-1:exon

SPIRE2
type: Gene
subclass of: SO_0000704
RO_0002162: 87175
gene: SPIRE2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1019983..1026875)
location: region:1019983-1026875:-1
so has part: feature:1019983-1026875:-1:exon
subclass of: SO_0000010

115907845
type: Gene
SIO_000068: ncbigene

position:1019983:-1
position: 1019983
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1026875:-1
position: 1026875
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1019983-1026875:-1:exon

SPIRE2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 87175
gene: SPIRE2
product: spire type actin nucleation factor 2
exception: unclassified transcription discrepancy
note: The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: deleted 3 bases in 3 codons; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 ESTs, 6 Proteins, and 91% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_030956017.1
SIO_010081: SPIRE2
subclass of: SO_0000673
so part of: SPIRE2
location: complement(join(1019983..1020605,1020687..1020802,1021016..1021043,1021167..1021234,1021307..1021441,1021652..1021785,1021892..1022042,1022122..1022291,1022374..1022482,1022574..1022660,1022741..1022905,1022996..1023076,1023338..1023698,1023877..1023914,1026660..1026875))
location: region:1019983-1026875:-1
so has part: feature:1026660-1026875:-1:exon
so has part: feature:1023877-1023914:-1:exon
so has part: feature:1023338-1023698:-1:exon
so has part: feature:1022996-1023076:-1:exon
so has part: feature:1022741-1022905:-1:exon
so has part: feature:1022574-1022660:-1:exon
so has part: feature:1022374-1022482:-1:exon
so has part: feature:1022122-1022291:-1:exon
so has part: feature:1021892-1022042:-1:exon
so has part: feature:1021652-1021785:-1:exon
so has part: feature:1021307-1021441:-1:exon
so has part: feature:1021167-1021234:-1:exon
so has part: feature:1021016-1021043:-1:exon
so has part: feature:1020687-1020802:-1:exon
so has part: feature:1019983-1020605:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1026660-1026875:-1:exon

position:1026660:-1
position: 1026660
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1023877-1023914:-1:exon

position:1023877:-1
position: 1023877
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1023914:-1
position: 1023914
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1023338-1023698:-1:exon

position:1023338:-1
position: 1023338
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1023698:-1
position: 1023698
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1022996-1023076:-1:exon

position:1022996:-1
position: 1022996
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1023076:-1
position: 1023076
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1022741-1022905:-1:exon

position:1022741:-1
position: 1022741
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1022905:-1
position: 1022905
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1022574-1022660:-1:exon

position:1022574:-1
position: 1022574
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1022660:-1
position: 1022660
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1022374-1022482:-1:exon

position:1022374:-1
position: 1022374
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1022482:-1
position: 1022482
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1022122-1022291:-1:exon

position:1022122:-1
position: 1022122
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1022291:-1
position: 1022291
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:1021892-1022042:-1:exon

position:1021892:-1
position: 1021892
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1022042:-1
position: 1022042
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:1021652-1021785:-1:exon

position:1021652:-1
position: 1021652
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1021785:-1
position: 1021785
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:1021307-1021441:-1:exon

position:1021307:-1
position: 1021307
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1021441:-1
position: 1021441
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:1021167-1021234:-1:exon

position:1021167:-1
position: 1021167
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1021234:-1
position: 1021234
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:1021016-1021043:-1:exon

position:1021016:-1
position: 1021016
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1021043:-1
position: 1021043
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:1020687-1020802:-1:exon

position:1020687:-1
position: 1020687
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1020802:-1
position: 1020802
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:1019983-1020605:-1:exon

position:1020605:-1
position: 1020605
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

SPIRE2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 87175
gene: SPIRE2
exception: unclassified translation discrepancy
note: The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: deleted 3 bases in 3 codons; Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: LOW QUALITY PROTEIN: protein spire homolog 2
translation: MARAGAGPPRELSLEEVLKCYEQPLNEEQAWALCFQGCRAAAAAPVAPAPLRTADIRLRADGSLRLPAPPHDLPALLTPSAEAQMVQSLGFAVYRALDWGLDENEERELSPRLEQLIDLMTNSDSEDSGCATADEGYGGQEEEEEGGEGPARSVRTFGQAMRCCAARLADPAGAPAHYQAVCRALFAETVELMAFLAKIRDAKELLQKLKEDEEEEERPAAELGNLRNTDWARLWVQLMRELRHGVKLKKVQEKQFNPLPTEYQLTPFEMLMQDIRARNYKLRKVMVDGDIPPRVKKDAHELILDFIRSRPPLKQASERRLRPLPQKQRTLHEKILEEIRQERKLRPVEQKGYSSLPCIPHACAGRLSSSSCLELSLCPASAIPARPRPRVLLKAPTLAEMEEMNLSEDEDSPGTEAPLKRDRSFSEQDLAQLQSQLGGDQAVPRDPEPLQPEPRPRSGSVPASCHPLPDGPALPRAALGAVEERPEDGSSAAPASSSKHLWLEFSHPVESLALTVEEMINVRRVLVKAEMEKFLQSKELYSSLRRGKVCCCCRAKFPLFSWPTSCFFCKRSVCSSCSLKMKMPSKKLAHIPVYALGFESLPGSLLPKAPPLRRREPFHSLSGPCWRRVEEEFPHIYAQGSVLRDVCSDCAGFVTDVVSSSRRSVAVLNASAANRRHAKARSLYSDAWLP
SIO_010081: SPIRE2
subclass of: SO_0000673
so part of: SPIRE2
location: complement(join(1020389..1020605,1020687..1020802,1021016..1021043,1021167..1021234,1021307..1021441,1021652..1021785,1021892..1022042,1022122..1022291,1022374..1022482,1022574..1022660,1022741..1022905,1022996..1023076,1023338..1023698,1023877..1023914,1026660..1026875))
location: region:1020389-1026875:-1
so has part: feature:1026660-1026875:-1:exon
so has part: feature:1023877-1023914:-1:exon
so has part: feature:1023338-1023698:-1:exon
so has part: feature:1022996-1023076:-1:exon
so has part: feature:1022741-1022905:-1:exon
so has part: feature:1022574-1022660:-1:exon
so has part: feature:1022374-1022482:-1:exon
so has part: feature:1022122-1022291:-1:exon
so has part: feature:1021892-1022042:-1:exon
so has part: feature:1021652-1021785:-1:exon
so has part: feature:1021307-1021441:-1:exon
so has part: feature:1021167-1021234:-1:exon
so has part: feature:1021016-1021043:-1:exon
so has part: feature:1020687-1020802:-1:exon
so has part: feature:1020389-1020605:-1:exon

XP_030811877.1
type: Protein
SIO_000068: ncbiprotein

position:1020389:-1
position: 1020389
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1026660-1026875:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1023877-1023914:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1023338-1023698:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1022996-1023076:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1022741-1022905:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1022574-1022660:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1022374-1022482:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1022122-1022291:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1021892-1022042:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1021652-1021785:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1021307-1021441:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1021167-1021234:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1021016-1021043:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1020687-1020802:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1020389-1020605:-1:exon

FANCA
type: Gene
subclass of: SO_0000704
RO_0002162: 87175
gene: FANCA
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1031714..1064799
location: region:1031714-1064799:1
so has part: feature:1031714-1064799:1:exon
subclass of: SO_0000010

115907933
type: Gene
SIO_000068: ncbigene

position:1031714:1
position: 1031714
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1064799:1
position: 1064799
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1031714-1064799:1:exon

FANCA
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 87175
gene: FANCA
product: FA complementation group A, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_030956168.1
SIO_010081: FANCA
subclass of: SO_0000673
so part of: FANCA
location: join(1031714..1031775,1032244..1032353,1033269..1033341,1033493..1033635,1033938..1034033,1035667..1035740,1036702..1036817,1037361..1037443,1037879..1037912,1040114..1040180,1040880..1040992,1041611..1041687,1042139..1042280,1042785..1042918,1044246..1044356,1044745..1044840,1044922..1044981,1045708..1045796,1046204..1046264,1046357..1046406,1047443..1047519,1049384..1049488,1049984..1050153,1050583..1050653,1051712..1051811,1053363..1053562,1053697..1053793,1054072..1054248,1055193..1055266,1055772..1055900,1056345..1056411,1056623..1056795,1057059..1057164,1057990..1058049,1058367..1058471,1059095..1059207,1059882..1060017,1061069..1061131,1062288..1062393,1062769..1062844,1062945..1063064,1063214..1063355,1063916..1064035,1064554..1064799)
location: region:1031714-1064799:1
so has part: feature:1031714-1031775:1:exon
so has part: feature:1032244-1032353:1:exon
so has part: feature:1033269-1033341:1:exon
so has part: feature:1033493-1033635:1:exon
so has part: feature:1033938-1034033:1:exon
so has part: feature:1035667-1035740:1:exon
so has part: feature:1036702-1036817:1:exon
so has part: feature:1037361-1037443:1:exon
so has part: feature:1037879-1037912:1:exon
so has part: feature:1040114-1040180:1:exon
so has part: feature:1040880-1040992:1:exon
so has part: feature:1041611-1041687:1:exon
so has part: feature:1042139-1042280:1:exon
so has part: feature:1042785-1042918:1:exon
so has part: feature:1044246-1044356:1:exon
so has part: feature:1044745-1044840:1:exon
so has part: feature:1044922-1044981:1:exon
so has part: feature:1045708-1045796:1:exon
so has part: feature:1046204-1046264:1:exon
so has part: feature:1046357-1046406:1:exon
so has part: feature:1047443-1047519:1:exon
so has part: feature:1049384-1049488:1:exon
so has part: feature:1049984-1050153:1:exon
so has part: feature:1050583-1050653:1:exon
so has part: feature:1051712-1051811:1:exon
so has part: feature:1053363-1053562:1:exon
so has part: feature:1053697-1053793:1:exon
so has part: feature:1054072-1054248:1:exon
so has part: feature:1055193-1055266:1:exon
so has part: feature:1055772-1055900:1:exon
so has part: feature:1056345-1056411:1:exon
so has part: feature:1056623-1056795:1:exon
so has part: feature:1057059-1057164:1:exon
so has part: feature:1057990-1058049:1:exon
so has part: feature:1058367-1058471:1:exon
so has part: feature:1059095-1059207:1:exon
so has part: feature:1059882-1060017:1:exon
so has part: feature:1061069-1061131:1:exon
so has part: feature:1062288-1062393:1:exon
so has part: feature:1062769-1062844:1:exon
so has part: feature:1062945-1063064:1:exon
so has part: feature:1063214-1063355:1:exon
so has part: feature:1063916-1064035:1:exon
so has part: feature:1064554-1064799:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1031714-1031775:1:exon

position:1031775:1
position: 1031775
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1032244-1032353:1:exon

position:1032244:1
position: 1032244
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1032353:1
position: 1032353
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1033269-1033341:1:exon

position:1033269:1
position: 1033269
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1033341:1
position: 1033341
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1033493-1033635:1:exon

position:1033493:1
position: 1033493
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1033635:1
position: 1033635
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1033938-1034033:1:exon

position:1033938:1
position: 1033938
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1034033:1
position: 1034033
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1035667-1035740:1:exon

position:1035667:1
position: 1035667
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1035740:1
position: 1035740
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1036702-1036817:1:exon

position:1036702:1
position: 1036702
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1036817:1
position: 1036817
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1037361-1037443:1:exon

position:1037361:1
position: 1037361
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1037443:1
position: 1037443
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:1037879-1037912:1:exon

position:1037879:1
position: 1037879
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1037912:1
position: 1037912
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:1040114-1040180:1:exon

position:1040114:1
position: 1040114
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1040180:1
position: 1040180
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:1040880-1040992:1:exon

position:1040880:1
position: 1040880
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1040992:1
position: 1040992
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:1041611-1041687:1:exon

position:1041611:1
position: 1041611
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1041687:1
position: 1041687
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:1042139-1042280:1:exon

position:1042139:1
position: 1042139
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1042280:1
position: 1042280
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:1042785-1042918:1:exon

position:1042785:1
position: 1042785
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1042918:1
position: 1042918
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:1044246-1044356:1:exon

position:1044246:1
position: 1044246
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1044356:1
position: 1044356
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:1044745-1044840:1:exon

position:1044745:1
position: 1044745
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1044840:1
position: 1044840
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:1044922-1044981:1:exon

position:1044922:1
position: 1044922
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1044981:1
position: 1044981
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:1045708-1045796:1:exon

position:1045708:1
position: 1045708
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1045796:1
position: 1045796
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:1046204-1046264:1:exon

position:1046204:1
position: 1046204
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1046264:1
position: 1046264
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:1046357-1046406:1:exon

position:1046357:1
position: 1046357
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1046406:1
position: 1046406
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:1047443-1047519:1:exon

position:1047443:1
position: 1047443
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1047519:1
position: 1047519
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 22
SIO_000628: feature:1049384-1049488:1:exon

position:1049384:1
position: 1049384
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1049488:1
position: 1049488
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 23
SIO_000628: feature:1049984-1050153:1:exon

position:1049984:1
position: 1049984
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1050153:1
position: 1050153
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 24
SIO_000628: feature:1050583-1050653:1:exon

position:1050583:1
position: 1050583
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1050653:1
position: 1050653
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 25
SIO_000628: feature:1051712-1051811:1:exon

position:1051712:1
position: 1051712
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1051811:1
position: 1051811
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 26
SIO_000628: feature:1053363-1053562:1:exon

position:1053363:1
position: 1053363
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1053562:1
position: 1053562
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 27
SIO_000628: feature:1053697-1053793:1:exon

position:1053697:1
position: 1053697
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1053793:1
position: 1053793
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 28
SIO_000628: feature:1054072-1054248:1:exon

position:1054072:1
position: 1054072
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1054248:1
position: 1054248
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 29
SIO_000628: feature:1055193-1055266:1:exon

position:1055193:1
position: 1055193
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1055266:1
position: 1055266
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 30
SIO_000628: feature:1055772-1055900:1:exon

position:1055772:1
position: 1055772
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1055900:1
position: 1055900
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 31
SIO_000628: feature:1056345-1056411:1:exon

position:1056345:1
position: 1056345
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1056411:1
position: 1056411
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 32
SIO_000628: feature:1056623-1056795:1:exon

position:1056623:1
position: 1056623
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1056795:1
position: 1056795
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 33
SIO_000628: feature:1057059-1057164:1:exon

position:1057059:1
position: 1057059
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1057164:1
position: 1057164
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 34
SIO_000628: feature:1057990-1058049:1:exon

position:1057990:1
position: 1057990
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1058049:1
position: 1058049
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 35
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urn:…
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urn:…
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urn:…
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urn:…
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urn:…
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urn:…
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position:1064554:1
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FANCA
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 87175
gene: FANCA
product: FA complementation group A, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_030956171.1
SIO_010081: FANCA
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urn:…
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SIO_000300: 43
SIO_000628: feature:1063916-1064005:1:exon

position:1064005:1
position: 1064005
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 44
SIO_000628: feature:1064554-1064799:1:exon

FANCA
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 87175
gene: FANCA
product: FA complementation group A, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_030956172.1
SIO_010081: FANCA
subclass of: SO_0000673
so part of: FANCA
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location: region:1031714-1064799:1
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urn:…
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urn:…
SIO_000300: 43
SIO_000628: feature:1064554-1064799:1:exon

FANCA
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 87175
gene: FANCA
product: FA complementation group A, transcript variant X5
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XM_030956173.1
SIO_010081: FANCA
subclass of: SO_0000673
so part of: FANCA
location: join(1031714..1031775,1032244..1032353,1033269..1033341,1033493..1033635,1033938..1034033,1035667..1035740,1036702..1036817,1037361..1037443,1037879..1037912,1040114..1040180,1040880..1040992,1041611..1041687,1042139..1042280,1042785..1042918,1044246..1044356,1044745..1044840,1044922..1044981,1045708..1045796,1046204..1046264,1046357..1046406,1047443..1047519,1049384..1049488,1049984..1050153,1050583..1050653,1051712..1051811,1053363..1053562,1053697..1053793,1054072..1054248,1055193..1055266,1055772..1055900,1056345..1056411,1056623..1056795,1057059..1057164,1057990..1058049,1058367..1058471,1059095..1059207,1059882..1060017,1061069..1061131,1062288..1062393,1062769..1062844,1063214..1063355,1063916..1064005,1064554..1064799)
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FANCA
type: Miscellaneous RNA
subclass of: SO_0000673
RO_0002162: 87175
gene: FANCA
product: FA complementation group A, transcript variant X7
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XR_004061079.1
SIO_010081: FANCA
so part of: FANCA
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position:1064691:1
position: 1064691
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

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position:1063236:1
position: 1063236
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
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FANCA
type: Miscellaneous RNA
subclass of: SO_0000673
RO_0002162: 87175
gene: FANCA
product: FA complementation group A, transcript variant X6
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XR_004061078.1
SIO_010081: FANCA
so part of: FANCA
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location: region:1031714-1064691:1
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FANCA
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 87175
gene: FANCA
product: FA complementation group A, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_030956170.1
SIO_010081: FANCA
subclass of: SO_0000673
so part of: FANCA
location: join(1031727..1031775,1032247..1032353,1033269..1033341,1033493..1033635,1033938..1034033,1035667..1035740,1036702..1036817,1037361..1037443,1037879..1037912,1040114..1040180,1040880..1040992,1041611..1041687,1042139..1042280,1042785..1042918,1044246..1044356,1044745..1044840,1044922..1044981,1045708..1045796,1046204..1046264,1046357..1046406,1047443..1047519,1049384..1049488,1049984..1050153,1050583..1050653,1051712..1051811,1053363..1053562,1053697..1053793,1054072..1054248,1055193..1055266,1055772..1055900,1056345..1056411,1056623..1056795,1057059..1057164,1057990..1058049,1058367..1058471,1059095..1059207,1059882..1060017,1061069..1061131,1062288..1062393,1062769..1062844,1062945..1063064,1063214..1063355,1063916..1064035,1064554..1064799)
location: region:1031727-1064799:1
so has part: feature:1031727-1031775:1:exon
so has part: feature:1032247-1032353:1:exon
so has part: feature:1033269-1033341:1:exon
so has part: feature:1033493-1033635:1:exon
so has part: feature:1033938-1034033:1:exon
so has part: feature:1035667-1035740:1:exon
so has part: feature:1036702-1036817:1:exon
so has part: feature:1037361-1037443:1:exon
so has part: feature:1037879-1037912:1:exon
so has part: feature:1040114-1040180:1:exon
so has part: feature:1040880-1040992:1:exon
so has part: feature:1041611-1041687:1:exon
so has part: feature:1042139-1042280:1:exon
so has part: feature:1042785-1042918:1:exon
so has part: feature:1044246-1044356:1:exon
so has part: feature:1044745-1044840:1:exon
so has part: feature:1044922-1044981:1:exon
so has part: feature:1045708-1045796:1:exon
so has part: feature:1046204-1046264:1:exon
so has part: feature:1046357-1046406:1:exon
so has part: feature:1047443-1047519:1:exon
so has part: feature:1049384-1049488:1:exon
so has part: feature:1049984-1050153:1:exon
so has part: feature:1050583-1050653:1:exon
so has part: feature:1051712-1051811:1:exon
so has part: feature:1053363-1053562:1:exon
so has part: feature:1053697-1053793:1:exon
so has part: feature:1054072-1054248:1:exon
so has part: feature:1055193-1055266:1:exon
so has part: feature:1055772-1055900:1:exon
so has part: feature:1056345-1056411:1:exon
so has part: feature:1056623-1056795:1:exon
so has part: feature:1057059-1057164:1:exon
so has part: feature:1057990-1058049:1:exon
so has part: feature:1058367-1058471:1:exon
so has part: feature:1059095-1059207:1:exon
so has part: feature:1059882-1060017:1:exon
so has part: feature:1061069-1061131:1:exon
so has part: feature:1062288-1062393:1:exon
so has part: feature:1062769-1062844:1:exon
so has part: feature:1062945-1063064:1:exon
so has part: feature:1063214-1063355:1:exon
so has part: feature:1063916-1064035:1:exon
so has part: feature:1064554-1064799:1:exon

position:1031727:1
position: 1031727
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1031727-1031775:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1032247-1032353:1:exon

position:1032247:1
position: 1032247
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1033269-1033341:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1033493-1033635:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1033938-1034033:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1035667-1035740:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1036702-1036817:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1037361-1037443:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1037879-1037912:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1040114-1040180:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1040880-1040992:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1041611-1041687:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1042139-1042280:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1042785-1042918:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1044246-1044356:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1044745-1044840:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1044922-1044981:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:1045708-1045796:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:1046204-1046264:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:1046357-1046406:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:1047443-1047519:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:1049384-1049488:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:1049984-1050153:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:1050583-1050653:1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:1051712-1051811:1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:1053363-1053562:1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:1053697-1053793:1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:1054072-1054248:1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:1055193-1055266:1:exon

urn:…
SIO_000300: 30
SIO_000628: feature:1055772-1055900:1:exon

urn:…
SIO_000300: 31
SIO_000628: feature:1056345-1056411:1:exon

urn:…
SIO_000300: 32
SIO_000628: feature:1056623-1056795:1:exon

urn:…
SIO_000300: 33
SIO_000628: feature:1057059-1057164:1:exon

urn:…
SIO_000300: 34
SIO_000628: feature:1057990-1058049:1:exon

urn:…
SIO_000300: 35
SIO_000628: feature:1058367-1058471:1:exon

urn:…
SIO_000300: 36
SIO_000628: feature:1059095-1059207:1:exon

urn:…
SIO_000300: 37
SIO_000628: feature:1059882-1060017:1:exon

urn:…
SIO_000300: 38
SIO_000628: feature:1061069-1061131:1:exon

urn:…
SIO_000300: 39
SIO_000628: feature:1062288-1062393:1:exon

urn:…
SIO_000300: 40
SIO_000628: feature:1062769-1062844:1:exon

urn:…
SIO_000300: 41
SIO_000628: feature:1062945-1063064:1:exon

urn:…
SIO_000300: 42
SIO_000628: feature:1063214-1063355:1:exon

urn:…
SIO_000300: 43
SIO_000628: feature:1063916-1064035:1:exon

urn:…
SIO_000300: 44
SIO_000628: feature:1064554-1064799:1:exon

FANCA
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 87175
gene: FANCA
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: Fanconi anemia group A protein isoform X1
translation: MAGAGGRSWRDLLAGRARKRRSPFGSGAELQGAALQLLDQHQNLAELLLEVGDSARPGVQDGAEHQGVSPESFIVSVLQEQASKLGVPTATLAAKNAAANVEQICQDPGSPSRAPLLNSDQRKRLTCLLQTVKDLLANNMFCRSLFCQEMWKMKEPLVLEAVWHLHSSDIVGLAELLDRSPAGPAAVEWLCSSLCGLCEQAGDISCGDTELAQRILSDFAIVFLQNGFEQPSELGRKVEFQKVAYICHAVLQRMLAWMLDAVGKEKQEDVSMVQAVRFWLNVFNVSLYGSVAHPESLRQFFRHTLTEVLTYNPVLKVSDAIQMQKEWSFTRTSPLLTALYRKLLVAFSVKESVCQLQQVLETHEVNWQHVLSCVSTLVVCQAEAGQLFKDLLSHLLLKAFGNYDMENMITAFLIARQAALEGPAVFMPYSEWFKASFGNAGGHHGSSKKSLVFLLEFLSELVPFEAAPYLKVHIMFPPCVASKHRSLLLEYISLAKTRLADLQVAIEDMGLYEDLSAPEEAVQPQAQALRDVEKALQIFESTRKVPTSVIEASIFRRPYYTSWFLPALLRPRVLPKTPDGRMAFIDSLKRADKIPSNLYSTYLQACHAMKEKVLQDDSKAEPSLPKEPLEQLEAELAELRTLVVEQAQWEEVAAQLAVVSDRLCRVLGDSSEDNERNSRVRVAVPAPGLAGCARAVPAPGLPLCPQRVVDLLLTSFCQTLLAASSFNPPDRQGPCLSLLVKMMCGHRNLLPALLARLCQLLYHQGPSLGAAHILGLAAFVIHLSECRALIPAVEADFGAAQAVPGKALSVSEYWSSLLVCRTEESFVFCLRFCTAAAAYLMCKFSSCSREDFCALVPPGLIKKLQFLVPRLSLEARGVLCEEARGALSWSCLSCPSLNYRRASLCLWRQAGFQELLKEKAFQLSFREWLLLELEVCPEKDILSAAERQDFHYWAIYQRYLPAPSAAGGCDGDLEEACGVILNAILDSSHRLELGAPARSKTSLSPEILCRLQELVLELRCRPKLLPGCSAAQRHLVFELLQGRLAGREPEQGPALGQQLWRQQELLQHRRILLGLPASTLVTTCWKGNRAVLDCDSFFAFVNSELKNVSSRGYALSFDITAHFFRGLLSASLDCEDAAEGVNEALATCQTKCPVVLLSAALWWPRLEPALCSQWKRLSGAPLAGELARLRGWHSSGTRFLCSGAAFPVSDPPWLSAAFLHGAILQHSPRGTEALERLGTGAEQLLVALLFFSLLDLISATIAPKEGVDFQASLERSLQILQCLQGRGTAWPLLFQPAEGAPGRFHVLHRAASQQHTRLLPLAFYSYLFPEPPRTSSGLVLFEELCTFCQRAVPQVSLQPCAPNTSLTPSFQQELLQQEPTFLSVALQMYIQLLQLFVEGQVLPQSDPHPTEHDPLELISAARQFLLGAIPHCPAQSLGNIQPVGAVLPLIQPLLSTCEELDPELAATLLHFSRPAVDVELEEELELFRGMD
SIO_010081: FANCA
subclass of: SO_0000673
so part of: FANCA
location: join(1031736..1031775,1032244..1032353,1033269..1033341,1033493..1033635,1033938..1034033,1035667..1035740,1036702..1036817,1037361..1037443,1037879..1037912,1040114..1040180,1040880..1040992,1041611..1041687,1042139..1042280,1042785..1042918,1044246..1044356,1044745..1044840,1044922..1044981,1045708..1045796,1046204..1046264,1046357..1046406,1047443..1047519,1049384..1049488,1049984..1050153,1050583..1050653,1051712..1051811,1053363..1053562,1053697..1053793,1054072..1054248,1055193..1055266,1055772..1055900,1056345..1056411,1056623..1056795,1057059..1057164,1057990..1058049,1058367..1058471,1059095..1059207,1059882..1060017,1061069..1061131,1062288..1062393,1062769..1062844,1062945..1063064,1063214..1063355,1063916..1064035,1064554..1064673)
location: region:1031736-1064673:1
so has part: feature:1031736-1031775:1:exon
so has part: feature:1032244-1032353:1:exon
so has part: feature:1033269-1033341:1:exon
so has part: feature:1033493-1033635:1:exon
so has part: feature:1033938-1034033:1:exon
so has part: feature:1035667-1035740:1:exon
so has part: feature:1036702-1036817:1:exon
so has part: feature:1037361-1037443:1:exon
so has part: feature:1037879-1037912:1:exon
so has part: feature:1040114-1040180:1:exon
so has part: feature:1040880-1040992:1:exon
so has part: feature:1041611-1041687:1:exon
so has part: feature:1042139-1042280:1:exon
so has part: feature:1042785-1042918:1:exon
so has part: feature:1044246-1044356:1:exon
so has part: feature:1044745-1044840:1:exon
so has part: feature:1044922-1044981:1:exon
so has part: feature:1045708-1045796:1:exon
so has part: feature:1046204-1046264:1:exon
so has part: feature:1046357-1046406:1:exon
so has part: feature:1047443-1047519:1:exon
so has part: feature:1049384-1049488:1:exon
so has part: feature:1049984-1050153:1:exon
so has part: feature:1050583-1050653:1:exon
so has part: feature:1051712-1051811:1:exon
so has part: feature:1053363-1053562:1:exon
so has part: feature:1053697-1053793:1:exon
so has part: feature:1054072-1054248:1:exon
so has part: feature:1055193-1055266:1:exon
so has part: feature:1055772-1055900:1:exon
so has part: feature:1056345-1056411:1:exon
so has part: feature:1056623-1056795:1:exon
so has part: feature:1057059-1057164:1:exon
so has part: feature:1057990-1058049:1:exon
so has part: feature:1058367-1058471:1:exon
so has part: feature:1059095-1059207:1:exon
so has part: feature:1059882-1060017:1:exon
so has part: feature:1061069-1061131:1:exon
so has part: feature:1062288-1062393:1:exon
so has part: feature:1062769-1062844:1:exon
so has part: feature:1062945-1063064:1:exon
so has part: feature:1063214-1063355:1:exon
so has part: feature:1063916-1064035:1:exon
so has part: feature:1064554-1064673:1:exon

XP_030812028.1
type: Protein
SIO_000068: ncbiprotein

position:1031736:1
position: 1031736
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1064673:1
position: 1064673
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1031736-1031775:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1032244-1032353:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1033269-1033341:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1033493-1033635:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1033938-1034033:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1035667-1035740:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1036702-1036817:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1037361-1037443:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1037879-1037912:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1040114-1040180:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1040880-1040992:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1041611-1041687:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1042139-1042280:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1042785-1042918:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1044246-1044356:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1044745-1044840:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1044922-1044981:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:1045708-1045796:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:1046204-1046264:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:1046357-1046406:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:1047443-1047519:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:1049384-1049488:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:1049984-1050153:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:1050583-1050653:1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:1051712-1051811:1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:1053363-1053562:1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:1053697-1053793:1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:1054072-1054248:1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:1055193-1055266:1:exon

urn:…
SIO_000300: 30
SIO_000628: feature:1055772-1055900:1:exon

urn:…
SIO_000300: 31
SIO_000628: feature:1056345-1056411:1:exon

urn:…
SIO_000300: 32
SIO_000628: feature:1056623-1056795:1:exon

urn:…
SIO_000300: 33
SIO_000628: feature:1057059-1057164:1:exon

urn:…
SIO_000300: 34
SIO_000628: feature:1057990-1058049:1:exon

urn:…
SIO_000300: 35
SIO_000628: feature:1058367-1058471:1:exon

urn:…
SIO_000300: 36
SIO_000628: feature:1059095-1059207:1:exon

urn:…
SIO_000300: 37
SIO_000628: feature:1059882-1060017:1:exon

urn:…
SIO_000300: 38
SIO_000628: feature:1061069-1061131:1:exon

urn:…
SIO_000300: 39
SIO_000628: feature:1062288-1062393:1:exon

urn:…
SIO_000300: 40
SIO_000628: feature:1062769-1062844:1:exon

urn:…
SIO_000300: 41
SIO_000628: feature:1062945-1063064:1:exon

urn:…
SIO_000300: 42
SIO_000628: feature:1063214-1063355:1:exon

urn:…
SIO_000300: 43
SIO_000628: feature:1063916-1064035:1:exon

urn:…
SIO_000300: 44
SIO_000628: feature:1064554-1064673:1:exon

FANCA
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 87175
gene: FANCA
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: Fanconi anemia group A protein isoform X3
translation: MAGAGGRSWRDLLAGRARKRRSPFGSGAELQGAALQLLDQHQNLAELLLEVGDSARPGVQDGAEHQGVSPESFIVSVLQEQASKLGVPTATLAAKNAAANVEQICQDPGSPSRAPLLNSDQRKRLTCLLQTVKDLLANNMFCRSLFCQEMWKMKEPLVLEAVWHLHSSDIVGLAELLDRSPAGPAAVEWLCSSLCGLCEQAGDISCGDTELAQRILSDFAIVFLQNGFEQPSELGRKVEFQKVAYICHAVLQRMLAWMLDAVGKEKQEDVSMVQAVRFWLNVFNVSLYGSVAHPESLRQFFRHTLTEVLTYNPVLKVSDAIQMQKEWSFTRTSPLLTALYRKLLVAFSVKESVCQLQQVLETHEVNWQHVLSCVSTLVVCQAEAGQLFKDLLSHLLLKAFGNYDMENMITAFLIARQAALEGPAVFMPYSEWFKASFGNAGGHHGSSKKSLVFLLEFLSELVPFEAAPYLKVHIMFPPCVASKHRSLLLEYISLAKTRLADLQVAIEDMGLYEDLSAPEEAVQPQAQALRDVEKALQIFESTRKVPTSVIEASIFRRPYYTSWFLPALLRPRVLPKTPDGRMAFIDSLKRADKIPSNLYSTYLQACHAMKEKVLQDDSKAEPSLPKEPLEQLEAELAELRTLVVEQAQWEEVAAQLAVVSDRLCRVLGDSSEDNERNSRVRVAVPAPGLAGCARAVPAPGLPLCPQRVVDLLLTSFCQTLLAASSFNPPDRQGPCLSLLVKMMCGHRNLLPALLARLCQLLYHQGPSLGAAHILGLAAFVIHLSECRALIPAVEADFGAAQAVPGKALSVSEYWSSLLVCRTEESFVFCLRFCTAAAAYLMCKFSSCSREDFCALVPPGLIKKLQFLVPRLSLEARGVLCEEARGALSWSCLSCPSLNYRRASLCLWRQAGFQELLKEKAFQLSFREWLLLELEVCPEKDILSAAERQDFHYWAIYQRYLPAPSAAGGCDGDLEEACGVILNAILDSSHRLELGAPARSKTSLSPEILCRLQELVLELRCRPKLLPGCSAAQRHLVFELLQGRLAGREPEQGPALGQQLWRQQELLQHRRILLGLPASTLVTTCWKGNRAVLDCDSFFAFVNSELKNVSSRGYALSFDITAHFFRGLLSASLDCEDAAEGVNEALATCQTKCPVVLLSAALWWPRLEPALCSQWKRLSGAPLAGELARLRGWHSSGTRFLCSGAAFPVSDPPWLSAAFLHGAILQHSPRGTEALERLGTGAEQLLVALLFFSLLDLISATIAPKEGVDFQASLERSLQILQCLQGRGTAWPLLFQPAEGAPGRFHVLHRAASQQHTRLLPLAFYSYLFPEPPRTSSGLVLFEELCTFCQRAVPQVSLQPCAPNTSLTPSFQQELLQQEPTFLSVALQMYIQLLQLFVEGQVLPQSDPHPTEHDPLELISAARQFLLGAIPHCPAQSLGNIQPLLSTCEELDPELAATLLHFSRPAVDVELEEELELFRGMD
SIO_010081: FANCA
subclass of: SO_0000673
so part of: FANCA
location: join(1031736..1031775,1032244..1032353,1033269..1033341,1033493..1033635,1033938..1034033,1035667..1035740,1036702..1036817,1037361..1037443,1037879..1037912,1040114..1040180,1040880..1040992,1041611..1041687,1042139..1042280,1042785..1042918,1044246..1044356,1044745..1044840,1044922..1044981,1045708..1045796,1046204..1046264,1046357..1046406,1047443..1047519,1049384..1049488,1049984..1050153,1050583..1050653,1051712..1051811,1053363..1053562,1053697..1053793,1054072..1054248,1055193..1055266,1055772..1055900,1056345..1056411,1056623..1056795,1057059..1057164,1057990..1058049,1058367..1058471,1059095..1059207,1059882..1060017,1061069..1061131,1062288..1062393,1062769..1062844,1062945..1063064,1063214..1063355,1063916..1064005,1064554..1064673)
location: region:1031736-1064673:1
so has part: feature:1031736-1031775:1:exon
so has part: feature:1032244-1032353:1:exon
so has part: feature:1033269-1033341:1:exon
so has part: feature:1033493-1033635:1:exon
so has part: feature:1033938-1034033:1:exon
so has part: feature:1035667-1035740:1:exon
so has part: feature:1036702-1036817:1:exon
so has part: feature:1037361-1037443:1:exon
so has part: feature:1037879-1037912:1:exon
so has part: feature:1040114-1040180:1:exon
so has part: feature:1040880-1040992:1:exon
so has part: feature:1041611-1041687:1:exon
so has part: feature:1042139-1042280:1:exon
so has part: feature:1042785-1042918:1:exon
so has part: feature:1044246-1044356:1:exon
so has part: feature:1044745-1044840:1:exon
so has part: feature:1044922-1044981:1:exon
so has part: feature:1045708-1045796:1:exon
so has part: feature:1046204-1046264:1:exon
so has part: feature:1046357-1046406:1:exon
so has part: feature:1047443-1047519:1:exon
so has part: feature:1049384-1049488:1:exon
so has part: feature:1049984-1050153:1:exon
so has part: feature:1050583-1050653:1:exon
so has part: feature:1051712-1051811:1:exon
so has part: feature:1053363-1053562:1:exon
so has part: feature:1053697-1053793:1:exon
so has part: feature:1054072-1054248:1:exon
so has part: feature:1055193-1055266:1:exon
so has part: feature:1055772-1055900:1:exon
so has part: feature:1056345-1056411:1:exon
so has part: feature:1056623-1056795:1:exon
so has part: feature:1057059-1057164:1:exon
so has part: feature:1057990-1058049:1:exon
so has part: feature:1058367-1058471:1:exon
so has part: feature:1059095-1059207:1:exon
so has part: feature:1059882-1060017:1:exon
so has part: feature:1061069-1061131:1:exon
so has part: feature:1062288-1062393:1:exon
so has part: feature:1062769-1062844:1:exon
so has part: feature:1062945-1063064:1:exon
so has part: feature:1063214-1063355:1:exon
so has part: feature:1063916-1064005:1:exon
so has part: feature:1064554-1064673:1:exon

XP_030812031.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1031736-1031775:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1032244-1032353:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1033269-1033341:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1033493-1033635:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1033938-1034033:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1035667-1035740:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1036702-1036817:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1037361-1037443:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1037879-1037912:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1040114-1040180:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1040880-1040992:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1041611-1041687:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1042139-1042280:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1042785-1042918:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1044246-1044356:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1044745-1044840:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1044922-1044981:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:1045708-1045796:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:1046204-1046264:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:1046357-1046406:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:1047443-1047519:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:1049384-1049488:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:1049984-1050153:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:1050583-1050653:1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:1051712-1051811:1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:1053363-1053562:1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:1053697-1053793:1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:1054072-1054248:1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:1055193-1055266:1:exon

urn:…
SIO_000300: 30
SIO_000628: feature:1055772-1055900:1:exon

urn:…
SIO_000300: 31
SIO_000628: feature:1056345-1056411:1:exon

urn:…
SIO_000300: 32
SIO_000628: feature:1056623-1056795:1:exon

urn:…
SIO_000300: 33
SIO_000628: feature:1057059-1057164:1:exon

urn:…
SIO_000300: 34
SIO_000628: feature:1057990-1058049:1:exon

urn:…
SIO_000300: 35
SIO_000628: feature:1058367-1058471:1:exon

urn:…
SIO_000300: 36
SIO_000628: feature:1059095-1059207:1:exon

urn:…
SIO_000300: 37
SIO_000628: feature:1059882-1060017:1:exon

urn:…
SIO_000300: 38
SIO_000628: feature:1061069-1061131:1:exon

urn:…
SIO_000300: 39
SIO_000628: feature:1062288-1062393:1:exon

urn:…
SIO_000300: 40
SIO_000628: feature:1062769-1062844:1:exon

urn:…
SIO_000300: 41
SIO_000628: feature:1062945-1063064:1:exon

urn:…
SIO_000300: 42
SIO_000628: feature:1063214-1063355:1:exon

urn:…
SIO_000300: 43
SIO_000628: feature:1063916-1064005:1:exon

urn:…
SIO_000300: 44
SIO_000628: feature:1064554-1064673:1:exon

FANCA
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 87175
gene: FANCA
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: Fanconi anemia group A protein isoform X4
translation: MAGAGGRSWRDLLAGRARKRRSPFGSGAELQGAALQLLDQHQNLAELLLEVGDSARPGVQDGAEHQGVSPESFIVSVLQEQASKLGVPTATLAAKNAAANVEQICQDPGSPSRAPLLNSDQRKRLTCLLQTVKDLLANNMFCRSLFCQEMWKMKEPLVLEAVWHLHSSDIVGLAELLDRSPAGPAAVEWLCSSLCGLCEQAGDISCGDTELAQRILSDFAIVFLQNGFEQPSELGRKVEFQKVAYICHAVLQRMLAWMLDAVGKEKQEDVSMVQAVRFWLNVFNVSLYGSVAHPESLRQFFRHTLTEVLTYNPVLKVSDAIQMQKEWSFTRTSPLLTALYRKLLVAFSVKESVCQLQQVLETHEVNWQHVLSCVSTLVVCQAEAGQLFKDLLSHLLLKAFGNYDMENMITAFLIARQAALEGPAVFMPYSEWFKASFGNAGGHHGSSKKSLVFLLEFLSELVPFEAAPYLKVHIMFPPCVASKHRSLLLEYISLAKTRLADLQVAIEDMGLYEDLSAPEEAVQPQAQALRDVEKALQIFESTRKVPTSVIEASIFRRPYYTSWFLPALLRPRVLPKTPDGRMAFIDSLKRADKIPSNLYSTYLQACHAMKEKVLQDDSKAEPSLPKEPLEQLEAELAELRTLVVEQAQWEEVAAQLAVVSDRLCRVLGDSSEDNERNSRVRVAVPAPGLAGCARAVPAPGLPLCPQRVVDLLLTSFCQTLLAASSFNPPDRQGPCLSLLVKMMCGHRNLLPALLARLCQLLYHQGPSLGAAHILGLAAFVIHLSECRALIPAVEADFGAAQAVPGKALSVSEYWSSLLVCRTEESFVFCLRFCTAAAAYLMCKFSSCSREDFCALVPPGLIKKLQFLVPRLSLEARGVLCEEARGALSWSCLSCPSLNYRRASLCLWRQAGFQELLKEKAFQLSFREWLLLELEVCPEKDILSAAERQDFHYWAIYQRYLPAPSAAGGCDGDLEEACGVILNAILDSSHRLELGAPARSKTSLSPEILCRLQELVLELRCRPKLLPGCSAAQRHLVFELLQGRLAGREPEQGPALGQQLWRQQELLQHRRILLGLPASTLVTTCWKGNRAVLDCDSFFAFVNSELKNVSSRGYALSFDITAHFFRGLLSASLDCEDAAEGVNEALATCQTKCPVVLLSAALWWPRLEPALCSQWKRLSGAPLAGELARLRGWHSSGTRFLCSGAAFPVSDPPWLSAAFLHGAILQHSPRGTEALERLGTGAEQLLVALLFFSLLDLISATIAPKEGVDFQASLERSLQILQCLQGRGTAWPLLFQPAEGAPGRFHVLHRAASQQHTRLLPLAFYSLTPSFQQELLQQEPTFLSVALQMYIQLLQLFVEGQVLPQSDPHPTEHDPLELISAARQFLLGAIPHCPAQSLGNIQPVGAVLPLIQPLLSTCEELDPELAATLLHFSRPAVDVELEEELELFRGMD
SIO_010081: FANCA
subclass of: SO_0000673
so part of: FANCA
location: join(1031736..1031775,1032244..1032353,1033269..1033341,1033493..1033635,1033938..1034033,1035667..1035740,1036702..1036817,1037361..1037443,1037879..1037912,1040114..1040180,1040880..1040992,1041611..1041687,1042139..1042280,1042785..1042918,1044246..1044356,1044745..1044840,1044922..1044981,1045708..1045796,1046204..1046264,1046357..1046406,1047443..1047519,1049384..1049488,1049984..1050153,1050583..1050653,1051712..1051811,1053363..1053562,1053697..1053793,1054072..1054248,1055193..1055266,1055772..1055900,1056345..1056411,1056623..1056795,1057059..1057164,1057990..1058049,1058367..1058471,1059095..1059207,1059882..1060017,1061069..1061131,1062288..1062393,1062769..1062844,1063214..1063355,1063916..1064035,1064554..1064673)
location: region:1031736-1064673:1
so has part: feature:1031736-1031775:1:exon
so has part: feature:1032244-1032353:1:exon
so has part: feature:1033269-1033341:1:exon
so has part: feature:1033493-1033635:1:exon
so has part: feature:1033938-1034033:1:exon
so has part: feature:1035667-1035740:1:exon
so has part: feature:1036702-1036817:1:exon
so has part: feature:1037361-1037443:1:exon
so has part: feature:1037879-1037912:1:exon
so has part: feature:1040114-1040180:1:exon
so has part: feature:1040880-1040992:1:exon
so has part: feature:1041611-1041687:1:exon
so has part: feature:1042139-1042280:1:exon
so has part: feature:1042785-1042918:1:exon
so has part: feature:1044246-1044356:1:exon
so has part: feature:1044745-1044840:1:exon
so has part: feature:1044922-1044981:1:exon
so has part: feature:1045708-1045796:1:exon
so has part: feature:1046204-1046264:1:exon
so has part: feature:1046357-1046406:1:exon
so has part: feature:1047443-1047519:1:exon
so has part: feature:1049384-1049488:1:exon
so has part: feature:1049984-1050153:1:exon
so has part: feature:1050583-1050653:1:exon
so has part: feature:1051712-1051811:1:exon
so has part: feature:1053363-1053562:1:exon
so has part: feature:1053697-1053793:1:exon
so has part: feature:1054072-1054248:1:exon
so has part: feature:1055193-1055266:1:exon
so has part: feature:1055772-1055900:1:exon
so has part: feature:1056345-1056411:1:exon
so has part: feature:1056623-1056795:1:exon
so has part: feature:1057059-1057164:1:exon
so has part: feature:1057990-1058049:1:exon
so has part: feature:1058367-1058471:1:exon
so has part: feature:1059095-1059207:1:exon
so has part: feature:1059882-1060017:1:exon
so has part: feature:1061069-1061131:1:exon
so has part: feature:1062288-1062393:1:exon
so has part: feature:1062769-1062844:1:exon
so has part: feature:1063214-1063355:1:exon
so has part: feature:1063916-1064035:1:exon
so has part: feature:1064554-1064673:1:exon

XP_030812032.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1031736-1031775:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1032244-1032353:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1033269-1033341:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1033493-1033635:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1033938-1034033:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1035667-1035740:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1036702-1036817:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1037361-1037443:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1037879-1037912:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1040114-1040180:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1040880-1040992:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1041611-1041687:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1042139-1042280:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1042785-1042918:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1044246-1044356:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1044745-1044840:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1044922-1044981:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:1045708-1045796:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:1046204-1046264:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:1046357-1046406:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:1047443-1047519:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:1049384-1049488:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:1049984-1050153:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:1050583-1050653:1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:1051712-1051811:1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:1053363-1053562:1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:1053697-1053793:1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:1054072-1054248:1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:1055193-1055266:1:exon

urn:…
SIO_000300: 30
SIO_000628: feature:1055772-1055900:1:exon

urn:…
SIO_000300: 31
SIO_000628: feature:1056345-1056411:1:exon

urn:…
SIO_000300: 32
SIO_000628: feature:1056623-1056795:1:exon

urn:…
SIO_000300: 33
SIO_000628: feature:1057059-1057164:1:exon

urn:…
SIO_000300: 34
SIO_000628: feature:1057990-1058049:1:exon

urn:…
SIO_000300: 35
SIO_000628: feature:1058367-1058471:1:exon

urn:…
SIO_000300: 36
SIO_000628: feature:1059095-1059207:1:exon

urn:…
SIO_000300: 37
SIO_000628: feature:1059882-1060017:1:exon

urn:…
SIO_000300: 38
SIO_000628: feature:1061069-1061131:1:exon

urn:…
SIO_000300: 39
SIO_000628: feature:1062288-1062393:1:exon

urn:…
SIO_000300: 40
SIO_000628: feature:1062769-1062844:1:exon

urn:…
SIO_000300: 41
SIO_000628: feature:1063214-1063355:1:exon

urn:…
SIO_000300: 42
SIO_000628: feature:1063916-1064035:1:exon

urn:…
SIO_000300: 43
SIO_000628: feature:1064554-1064673:1:exon

FANCA
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 87175
gene: FANCA
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: Fanconi anemia group A protein isoform X5
translation: MAGAGGRSWRDLLAGRARKRRSPFGSGAELQGAALQLLDQHQNLAELLLEVGDSARPGVQDGAEHQGVSPESFIVSVLQEQASKLGVPTATLAAKNAAANVEQICQDPGSPSRAPLLNSDQRKRLTCLLQTVKDLLANNMFCRSLFCQEMWKMKEPLVLEAVWHLHSSDIVGLAELLDRSPAGPAAVEWLCSSLCGLCEQAGDISCGDTELAQRILSDFAIVFLQNGFEQPSELGRKVEFQKVAYICHAVLQRMLAWMLDAVGKEKQEDVSMVQAVRFWLNVFNVSLYGSVAHPESLRQFFRHTLTEVLTYNPVLKVSDAIQMQKEWSFTRTSPLLTALYRKLLVAFSVKESVCQLQQVLETHEVNWQHVLSCVSTLVVCQAEAGQLFKDLLSHLLLKAFGNYDMENMITAFLIARQAALEGPAVFMPYSEWFKASFGNAGGHHGSSKKSLVFLLEFLSELVPFEAAPYLKVHIMFPPCVASKHRSLLLEYISLAKTRLADLQVAIEDMGLYEDLSAPEEAVQPQAQALRDVEKALQIFESTRKVPTSVIEASIFRRPYYTSWFLPALLRPRVLPKTPDGRMAFIDSLKRADKIPSNLYSTYLQACHAMKEKVLQDDSKAEPSLPKEPLEQLEAELAELRTLVVEQAQWEEVAAQLAVVSDRLCRVLGDSSEDNERNSRVRVAVPAPGLAGCARAVPAPGLPLCPQRVVDLLLTSFCQTLLAASSFNPPDRQGPCLSLLVKMMCGHRNLLPALLARLCQLLYHQGPSLGAAHILGLAAFVIHLSECRALIPAVEADFGAAQAVPGKALSVSEYWSSLLVCRTEESFVFCLRFCTAAAAYLMCKFSSCSREDFCALVPPGLIKKLQFLVPRLSLEARGVLCEEARGALSWSCLSCPSLNYRRASLCLWRQAGFQELLKEKAFQLSFREWLLLELEVCPEKDILSAAERQDFHYWAIYQRYLPAPSAAGGCDGDLEEACGVILNAILDSSHRLELGAPARSKTSLSPEILCRLQELVLELRCRPKLLPGCSAAQRHLVFELLQGRLAGREPEQGPALGQQLWRQQELLQHRRILLGLPASTLVTTCWKGNRAVLDCDSFFAFVNSELKNVSSRGYALSFDITAHFFRGLLSASLDCEDAAEGVNEALATCQTKCPVVLLSAALWWPRLEPALCSQWKRLSGAPLAGELARLRGWHSSGTRFLCSGAAFPVSDPPWLSAAFLHGAILQHSPRGTEALERLGTGAEQLLVALLFFSLLDLISATIAPKEGVDFQASLERSLQILQCLQGRGTAWPLLFQPAEGAPGRFHVLHRAASQQHTRLLPLAFYSLTPSFQQELLQQEPTFLSVALQMYIQLLQLFVEGQVLPQSDPHPTEHDPLELISAARQFLLGAIPHCPAQSLGNIQPLLSTCEELDPELAATLLHFSRPAVDVELEEELELFRGMD
SIO_010081: FANCA
subclass of: SO_0000673
so part of: FANCA
location: join(1031736..1031775,1032244..1032353,1033269..1033341,1033493..1033635,1033938..1034033,1035667..1035740,1036702..1036817,1037361..1037443,1037879..1037912,1040114..1040180,1040880..1040992,1041611..1041687,1042139..1042280,1042785..1042918,1044246..1044356,1044745..1044840,1044922..1044981,1045708..1045796,1046204..1046264,1046357..1046406,1047443..1047519,1049384..1049488,1049984..1050153,1050583..1050653,1051712..1051811,1053363..1053562,1053697..1053793,1054072..1054248,1055193..1055266,1055772..1055900,1056345..1056411,1056623..1056795,1057059..1057164,1057990..1058049,1058367..1058471,1059095..1059207,1059882..1060017,1061069..1061131,1062288..1062393,1062769..1062844,1063214..1063355,1063916..1064005,1064554..1064673)
location: region:1031736-1064673:1
so has part: feature:1031736-1031775:1:exon
so has part: feature:1032244-1032353:1:exon
so has part: feature:1033269-1033341:1:exon
so has part: feature:1033493-1033635:1:exon
so has part: feature:1033938-1034033:1:exon
so has part: feature:1035667-1035740:1:exon
so has part: feature:1036702-1036817:1:exon
so has part: feature:1037361-1037443:1:exon
so has part: feature:1037879-1037912:1:exon
so has part: feature:1040114-1040180:1:exon
so has part: feature:1040880-1040992:1:exon
so has part: feature:1041611-1041687:1:exon
so has part: feature:1042139-1042280:1:exon
so has part: feature:1042785-1042918:1:exon
so has part: feature:1044246-1044356:1:exon
so has part: feature:1044745-1044840:1:exon
so has part: feature:1044922-1044981:1:exon
so has part: feature:1045708-1045796:1:exon
so has part: feature:1046204-1046264:1:exon
so has part: feature:1046357-1046406:1:exon
so has part: feature:1047443-1047519:1:exon
so has part: feature:1049384-1049488:1:exon
so has part: feature:1049984-1050153:1:exon
so has part: feature:1050583-1050653:1:exon
so has part: feature:1051712-1051811:1:exon
so has part: feature:1053363-1053562:1:exon
so has part: feature:1053697-1053793:1:exon
so has part: feature:1054072-1054248:1:exon
so has part: feature:1055193-1055266:1:exon
so has part: feature:1055772-1055900:1:exon
so has part: feature:1056345-1056411:1:exon
so has part: feature:1056623-1056795:1:exon
so has part: feature:1057059-1057164:1:exon
so has part: feature:1057990-1058049:1:exon
so has part: feature:1058367-1058471:1:exon
so has part: feature:1059095-1059207:1:exon
so has part: feature:1059882-1060017:1:exon
so has part: feature:1061069-1061131:1:exon
so has part: feature:1062288-1062393:1:exon
so has part: feature:1062769-1062844:1:exon
so has part: feature:1063214-1063355:1:exon
so has part: feature:1063916-1064005:1:exon
so has part: feature:1064554-1064673:1:exon

XP_030812033.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1031736-1031775:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1032244-1032353:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1033269-1033341:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1033493-1033635:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1033938-1034033:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1035667-1035740:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1036702-1036817:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1037361-1037443:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1037879-1037912:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1040114-1040180:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1040880-1040992:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1041611-1041687:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1042139-1042280:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1042785-1042918:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1044246-1044356:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1044745-1044840:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1044922-1044981:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:1045708-1045796:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:1046204-1046264:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:1046357-1046406:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:1047443-1047519:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:1049384-1049488:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:1049984-1050153:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:1050583-1050653:1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:1051712-1051811:1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:1053363-1053562:1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:1053697-1053793:1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:1054072-1054248:1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:1055193-1055266:1:exon

urn:…
SIO_000300: 30
SIO_000628: feature:1055772-1055900:1:exon

urn:…
SIO_000300: 31
SIO_000628: feature:1056345-1056411:1:exon

urn:…
SIO_000300: 32
SIO_000628: feature:1056623-1056795:1:exon

urn:…
SIO_000300: 33
SIO_000628: feature:1057059-1057164:1:exon

urn:…
SIO_000300: 34
SIO_000628: feature:1057990-1058049:1:exon

urn:…
SIO_000300: 35
SIO_000628: feature:1058367-1058471:1:exon

urn:…
SIO_000300: 36
SIO_000628: feature:1059095-1059207:1:exon

urn:…
SIO_000300: 37
SIO_000628: feature:1059882-1060017:1:exon

urn:…
SIO_000300: 38
SIO_000628: feature:1061069-1061131:1:exon

urn:…
SIO_000300: 39
SIO_000628: feature:1062288-1062393:1:exon

urn:…
SIO_000300: 40
SIO_000628: feature:1062769-1062844:1:exon

urn:…
SIO_000300: 41
SIO_000628: feature:1063214-1063355:1:exon

urn:…
SIO_000300: 42
SIO_000628: feature:1063916-1064005:1:exon

urn:…
SIO_000300: 43
SIO_000628: feature:1064554-1064673:1:exon

FANCA
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 87175
gene: FANCA
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: Fanconi anemia group A protein isoform X2
translation: MAGAGGRSWRDLLGRARKRRSPFGSGAELQGAALQLLDQHQNLAELLLEVGDSARPGVQDGAEHQGVSPESFIVSVLQEQASKLGVPTATLAAKNAAANVEQICQDPGSPSRAPLLNSDQRKRLTCLLQTVKDLLANNMFCRSLFCQEMWKMKEPLVLEAVWHLHSSDIVGLAELLDRSPAGPAAVEWLCSSLCGLCEQAGDISCGDTELAQRILSDFAIVFLQNGFEQPSELGRKVEFQKVAYICHAVLQRMLAWMLDAVGKEKQEDVSMVQAVRFWLNVFNVSLYGSVAHPESLRQFFRHTLTEVLTYNPVLKVSDAIQMQKEWSFTRTSPLLTALYRKLLVAFSVKESVCQLQQVLETHEVNWQHVLSCVSTLVVCQAEAGQLFKDLLSHLLLKAFGNYDMENMITAFLIARQAALEGPAVFMPYSEWFKASFGNAGGHHGSSKKSLVFLLEFLSELVPFEAAPYLKVHIMFPPCVASKHRSLLLEYISLAKTRLADLQVAIEDMGLYEDLSAPEEAVQPQAQALRDVEKALQIFESTRKVPTSVIEASIFRRPYYTSWFLPALLRPRVLPKTPDGRMAFIDSLKRADKIPSNLYSTYLQACHAMKEKVLQDDSKAEPSLPKEPLEQLEAELAELRTLVVEQAQWEEVAAQLAVVSDRLCRVLGDSSEDNERNSRVRVAVPAPGLAGCARAVPAPGLPLCPQRVVDLLLTSFCQTLLAASSFNPPDRQGPCLSLLVKMMCGHRNLLPALLARLCQLLYHQGPSLGAAHILGLAAFVIHLSECRALIPAVEADFGAAQAVPGKALSVSEYWSSLLVCRTEESFVFCLRFCTAAAAYLMCKFSSCSREDFCALVPPGLIKKLQFLVPRLSLEARGVLCEEARGALSWSCLSCPSLNYRRASLCLWRQAGFQELLKEKAFQLSFREWLLLELEVCPEKDILSAAERQDFHYWAIYQRYLPAPSAAGGCDGDLEEACGVILNAILDSSHRLELGAPARSKTSLSPEILCRLQELVLELRCRPKLLPGCSAAQRHLVFELLQGRLAGREPEQGPALGQQLWRQQELLQHRRILLGLPASTLVTTCWKGNRAVLDCDSFFAFVNSELKNVSSRGYALSFDITAHFFRGLLSASLDCEDAAEGVNEALATCQTKCPVVLLSAALWWPRLEPALCSQWKRLSGAPLAGELARLRGWHSSGTRFLCSGAAFPVSDPPWLSAAFLHGAILQHSPRGTEALERLGTGAEQLLVALLFFSLLDLISATIAPKEGVDFQASLERSLQILQCLQGRGTAWPLLFQPAEGAPGRFHVLHRAASQQHTRLLPLAFYSYLFPEPPRTSSGLVLFEELCTFCQRAVPQVSLQPCAPNTSLTPSFQQELLQQEPTFLSVALQMYIQLLQLFVEGQVLPQSDPHPTEHDPLELISAARQFLLGAIPHCPAQSLGNIQPVGAVLPLIQPLLSTCEELDPELAATLLHFSRPAVDVELEEELELFRGMD
SIO_010081: FANCA
subclass of: SO_0000673
so part of: FANCA
location: join(1031736..1031775,1032247..1032353,1033269..1033341,1033493..1033635,1033938..1034033,1035667..1035740,1036702..1036817,1037361..1037443,1037879..1037912,1040114..1040180,1040880..1040992,1041611..1041687,1042139..1042280,1042785..1042918,1044246..1044356,1044745..1044840,1044922..1044981,1045708..1045796,1046204..1046264,1046357..1046406,1047443..1047519,1049384..1049488,1049984..1050153,1050583..1050653,1051712..1051811,1053363..1053562,1053697..1053793,1054072..1054248,1055193..1055266,1055772..1055900,1056345..1056411,1056623..1056795,1057059..1057164,1057990..1058049,1058367..1058471,1059095..1059207,1059882..1060017,1061069..1061131,1062288..1062393,1062769..1062844,1062945..1063064,1063214..1063355,1063916..1064035,1064554..1064673)
location: region:1031736-1064673:1
so has part: feature:1031736-1031775:1:exon
so has part: feature:1032247-1032353:1:exon
so has part: feature:1033269-1033341:1:exon
so has part: feature:1033493-1033635:1:exon
so has part: feature:1033938-1034033:1:exon
so has part: feature:1035667-1035740:1:exon
so has part: feature:1036702-1036817:1:exon
so has part: feature:1037361-1037443:1:exon
so has part: feature:1037879-1037912:1:exon
so has part: feature:1040114-1040180:1:exon
so has part: feature:1040880-1040992:1:exon
so has part: feature:1041611-1041687:1:exon
so has part: feature:1042139-1042280:1:exon
so has part: feature:1042785-1042918:1:exon
so has part: feature:1044246-1044356:1:exon
so has part: feature:1044745-1044840:1:exon
so has part: feature:1044922-1044981:1:exon
so has part: feature:1045708-1045796:1:exon
so has part: feature:1046204-1046264:1:exon
so has part: feature:1046357-1046406:1:exon
so has part: feature:1047443-1047519:1:exon
so has part: feature:1049384-1049488:1:exon
so has part: feature:1049984-1050153:1:exon
so has part: feature:1050583-1050653:1:exon
so has part: feature:1051712-1051811:1:exon
so has part: feature:1053363-1053562:1:exon
so has part: feature:1053697-1053793:1:exon
so has part: feature:1054072-1054248:1:exon
so has part: feature:1055193-1055266:1:exon
so has part: feature:1055772-1055900:1:exon
so has part: feature:1056345-1056411:1:exon
so has part: feature:1056623-1056795:1:exon
so has part: feature:1057059-1057164:1:exon
so has part: feature:1057990-1058049:1:exon
so has part: feature:1058367-1058471:1:exon
so has part: feature:1059095-1059207:1:exon
so has part: feature:1059882-1060017:1:exon
so has part: feature:1061069-1061131:1:exon
so has part: feature:1062288-1062393:1:exon
so has part: feature:1062769-1062844:1:exon
so has part: feature:1062945-1063064:1:exon
so has part: feature:1063214-1063355:1:exon
so has part: feature:1063916-1064035:1:exon
so has part: feature:1064554-1064673:1:exon

XP_030812030.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1031736-1031775:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1032247-1032353:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1033269-1033341:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1033493-1033635:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1033938-1034033:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1035667-1035740:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1036702-1036817:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1037361-1037443:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1037879-1037912:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1040114-1040180:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1040880-1040992:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1041611-1041687:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1042139-1042280:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1042785-1042918:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1044246-1044356:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1044745-1044840:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1044922-1044981:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:1045708-1045796:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:1046204-1046264:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:1046357-1046406:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:1047443-1047519:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:1049384-1049488:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:1049984-1050153:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:1050583-1050653:1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:1051712-1051811:1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:1053363-1053562:1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:1053697-1053793:1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:1054072-1054248:1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:1055193-1055266:1:exon

urn:…
SIO_000300: 30
SIO_000628: feature:1055772-1055900:1:exon

urn:…
SIO_000300: 31
SIO_000628: feature:1056345-1056411:1:exon

urn:…
SIO_000300: 32
SIO_000628: feature:1056623-1056795:1:exon

urn:…
SIO_000300: 33
SIO_000628: feature:1057059-1057164:1:exon

urn:…
SIO_000300: 34
SIO_000628: feature:1057990-1058049:1:exon

urn:…
SIO_000300: 35
SIO_000628: feature:1058367-1058471:1:exon

urn:…
SIO_000300: 36
SIO_000628: feature:1059095-1059207:1:exon

urn:…
SIO_000300: 37
SIO_000628: feature:1059882-1060017:1:exon

urn:…
SIO_000300: 38
SIO_000628: feature:1061069-1061131:1:exon

urn:…
SIO_000300: 39
SIO_000628: feature:1062288-1062393:1:exon

urn:…
SIO_000300: 40
SIO_000628: feature:1062769-1062844:1:exon

urn:…
SIO_000300: 41
SIO_000628: feature:1062945-1063064:1:exon

urn:…
SIO_000300: 42
SIO_000628: feature:1063214-1063355:1:exon

urn:…
SIO_000300: 43
SIO_000628: feature:1063916-1064035:1:exon

urn:…
SIO_000300: 44
SIO_000628: feature:1064554-1064673:1:exon

ZNF276
type: Gene
subclass of: SO_0000704
RO_0002162: 87175
gene: ZNF276
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1064732..1072448)
location: region:1064732-1072448:-1
so has part: feature:1064732-1072448:-1:exon
subclass of: SO_0000010

115908050
type: Gene
SIO_000068: ncbigene

position:1064732:-1
position: 1064732
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1072448:-1
position: 1072448
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1064732-1072448:-1:exon

ZNF276
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 87175
gene: ZNF276
product: zinc finger protein 276
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 96% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_030956344.1
SIO_010081: ZNF276
subclass of: SO_0000673
so part of: ZNF276
location: complement(join(1064732..1065504,1066141..1066240,1066463..1066580,1066943..1067018,1067093..1067203,1067492..1067572,1068587..1068665,1069496..1069981,1070603..1070655,1070777..1071086,1072307..1072448))
location: region:1064732-1072448:-1
so has part: feature:1072307-1072448:-1:exon
so has part: feature:1070777-1071086:-1:exon
so has part: feature:1070603-1070655:-1:exon
so has part: feature:1069496-1069981:-1:exon
so has part: feature:1068587-1068665:-1:exon
so has part: feature:1067492-1067572:-1:exon
so has part: feature:1067093-1067203:-1:exon
so has part: feature:1066943-1067018:-1:exon
so has part: feature:1066463-1066580:-1:exon
so has part: feature:1066141-1066240:-1:exon
so has part: feature:1064732-1065504:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1072307-1072448:-1:exon

position:1072307:-1
position: 1072307
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1070777-1071086:-1:exon

position:1070777:-1
position: 1070777
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1071086:-1
position: 1071086
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1070603-1070655:-1:exon

position:1070603:-1
position: 1070603
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1070655:-1
position: 1070655
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1069496-1069981:-1:exon

position:1069496:-1
position: 1069496
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1069981:-1
position: 1069981
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1068587-1068665:-1:exon

position:1068587:-1
position: 1068587
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1068665:-1
position: 1068665
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1067492-1067572:-1:exon

position:1067492:-1
position: 1067492
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1067572:-1
position: 1067572
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1067093-1067203:-1:exon

position:1067093:-1
position: 1067093
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1067203:-1
position: 1067203
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1066943-1067018:-1:exon

position:1066943:-1
position: 1066943
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1067018:-1
position: 1067018
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:1066463-1066580:-1:exon

position:1066463:-1
position: 1066463
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1066580:-1
position: 1066580
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:1066141-1066240:-1:exon

position:1066141:-1
position: 1066141
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1066240:-1
position: 1066240
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:1064732-1065504:-1:exon

position:1065504:-1
position: 1065504
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

ZNF276
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 87175
gene: ZNF276
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: zinc finger protein 276
translation: MKRDRRGRFLAAPGGPRPPAPRRTPGTAARGSEPAEPPAAAACAPEAGIGRALSTGYCRLCHGKFSSRSLRHAFGKVPVLGESSEKQRRVDQVFFADFQRLVGVAVRQDPALPQFVCKKCHAQFYKCRSVLRTFIQRVNASPTGHAKSKGKSSGVQAQPGMEGGASCLVELITSSPQCLHSLVRWAHAHAGGCASVPALRSVLSSEYCGVLRASWGCADGHDYVMDTGSDCGSALLDNAAALKCDWSKGSAQQRLTDNGAEAVPAPKAQHAAVRTAPGQQPASTGSAAVPLSVEKEPGQDRDPSPSRLDGAASVREQALPQPVSPLSTATGQLSGKQVLSATSDERVKDEFSDLSEGDFLSDDESEKRNVQSSDDSFEPYPEKKVSGKKSDSKEAKKAEEPKIRKKPGPKPGWKKKIKCEREELPTIYKCPYQGCTAVYRGADGMKKHIKEHHEEVRERPCPHPGCNKVFMIDRYLQRHVKLIHTEVRNYICDECGQTFKQRKHLSVHQMRHSGAKPLQCEICGFQCRQRASLKYHMTKHKAEAELEFACDQCGKRFEKAHNLNVHMSMVHPLTQAQDKGKALEPEPLLLLAPAGTAQGQAVKPEVTAEPEPT
SIO_010081: ZNF276
subclass of: SO_0000673
so part of: ZNF276
location: complement(join(1065219..1065504,1066141..1066240,1066463..1066580,1066943..1067018,1067093..1067203,1067492..1067572,1068587..1068665,1069496..1069981,1070603..1070655,1070777..1071086,1072307..1072448))
location: region:1065219-1072448:-1
so has part: feature:1072307-1072448:-1:exon
so has part: feature:1070777-1071086:-1:exon
so has part: feature:1070603-1070655:-1:exon
so has part: feature:1069496-1069981:-1:exon
so has part: feature:1068587-1068665:-1:exon
so has part: feature:1067492-1067572:-1:exon
so has part: feature:1067093-1067203:-1:exon
so has part: feature:1066943-1067018:-1:exon
so has part: feature:1066463-1066580:-1:exon
so has part: feature:1066141-1066240:-1:exon
so has part: feature:1065219-1065504:-1:exon

XP_030812204.1
type: Protein
SIO_000068: ncbiprotein

position:1065219:-1
position: 1065219
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1072307-1072448:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1070777-1071086:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1070603-1070655:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1069496-1069981:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1068587-1068665:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1067492-1067572:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1067093-1067203:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1066943-1067018:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1066463-1066580:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1066141-1066240:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1065219-1065504:-1:exon

VPS9D1
type: Gene
subclass of: SO_0000704
RO_0002162: 87175
gene: VPS9D1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1072587..1077110
location: region:1072587-1077110:1
so has part: feature:1072587-1077110:1:exon
subclass of: SO_0000010

115908051
type: Gene
SIO_000068: ncbigene

position:1072587:1
position: 1072587
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1077110:1
position: 1077110
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1072587-1077110:1:exon

VPS9D1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 87175
gene: VPS9D1
product: VPS9 domain containing 1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_030956345.1
SIO_010081: VPS9D1
subclass of: SO_0000673
so part of: VPS9D1
location: join(1072587..1072700,1073168..1073240,1073316..1073408,1073505..1073667,1073952..1074063,1074203..1074265,1074425..1074477,1074556..1074643,1074759..1074844,1074934..1075394,1075499..1075628,1075705..1075898,1075979..1076060,1076140..1076244,1076490..1076601,1076985..1077110)
location: region:1072587-1077110:1
so has part: feature:1072587-1072700:1:exon
so has part: feature:1073168-1073240:1:exon
so has part: feature:1073316-1073408:1:exon
so has part: feature:1073505-1073667:1:exon
so has part: feature:1073952-1074063:1:exon
so has part: feature:1074203-1074265:1:exon
so has part: feature:1074425-1074477:1:exon
so has part: feature:1074556-1074643:1:exon
so has part: feature:1074759-1074844:1:exon
so has part: feature:1074934-1075394:1:exon
so has part: feature:1075499-1075628:1:exon
so has part: feature:1075705-1075898:1:exon
so has part: feature:1075979-1076060:1:exon
so has part: feature:1076140-1076244:1:exon
so has part: feature:1076490-1076601:1:exon
so has part: feature:1076985-1077110:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1072587-1072700:1:exon

position:1072700:1
position: 1072700
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1073168-1073240:1:exon

position:1073168:1
position: 1073168
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1073240:1
position: 1073240
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1073316-1073408:1:exon

position:1073316:1
position: 1073316
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1073408:1
position: 1073408
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1073505-1073667:1:exon

position:1073505:1
position: 1073505
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1073667:1
position: 1073667
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1073952-1074063:1:exon

position:1073952:1
position: 1073952
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1074063:1
position: 1074063
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1074203-1074265:1:exon

position:1074203:1
position: 1074203
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1074265:1
position: 1074265
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1074425-1074477:1:exon

position:1074425:1
position: 1074425
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1074477:1
position: 1074477
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1074556-1074643:1:exon

position:1074556:1
position: 1074556
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1074643:1
position: 1074643
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:1074759-1074844:1:exon

position:1074759:1
position: 1074759
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1074844:1
position: 1074844
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:1074934-1075394:1:exon

position:1074934:1
position: 1074934
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1075394:1
position: 1075394
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:1075499-1075628:1:exon

position:1075499:1
position: 1075499
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1075628:1
position: 1075628
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:1075705-1075898:1:exon

position:1075705:1
position: 1075705
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1075898:1
position: 1075898
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:1075979-1076060:1:exon

position:1075979:1
position: 1075979
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1076060:1
position: 1076060
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:1076140-1076244:1:exon

position:1076140:1
position: 1076140
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1076244:1
position: 1076244
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:1076490-1076601:1:exon

position:1076490:1
position: 1076490
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1076601:1
position: 1076601
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:1076985-1077110:1:exon

position:1076985:1
position: 1076985
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

VPS9D1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 87175
gene: VPS9D1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: VPS9 domain-containing protein 1
translation: MAAPGAARGPRRAGGRGLQGAMRAASGALGMDSAGRTREAYVEYLKSITLIAQALQEEAAGTENSEGVTPDTPKLLKLAEQCLERVKSIAAALGKAQVKAAAQERGGGPAPLPRHRRVCSDEGGKLSPFLPPEIFQKLQIAEAQSSRKELTPLEEASLQNQKLKAAYEARVARLNPSQAVQKTSLTLSLQRQMMENLVIAKAREETLQRKMEERRLRLQEAANRRFSSSVALTPEEQEQRALYAAILEYEQDHDWPRQWKAQLKRSPADLSVVSGLFSCLLSCPEHPISQLLRRLQCAVYARLYPAVSRGPADASPASPSALSFLSLDAGGSSLPAEPGGRRLRASRSLHCMFSVPEHGPAALRHSQSSTPLADSGAPGPAEPPEPPRESSFEDLERFLASPEGWAPAEPPASSGQDTALPELLKGVVRDIHNAIDRLLALTLLAFEGLGTAAGKDQCLACLEEAFFPPLWAPLLALYRTVQQPREAALARSMERHRHAGPADMGLASRLFPPGPAAPRHASAVQDLRLIALESCPRRKLECIVRALRGICECAEEYCGSRDGRSLATAAIGADDLLPILSYVVLQTGLPQLLSECAALEEFIHEGYLIGEEGYCLTSLQSALSYVESLQ
SIO_010081: VPS9D1
subclass of: SO_0000673
so part of: VPS9D1
location: join(1072587..1072700,1073168..1073240,1073316..1073408,1073505..1073667,1073952..1074063,1074203..1074265,1074425..1074477,1074556..1074643,1074759..1074844,1074934..1075394,1075499..1075628,1075705..1075898,1075979..1076060,1076140..1076244,1076490..1076565)
location: region:1072587-1076565:1
so has part: feature:1072587-1072700:1:exon
so has part: feature:1073168-1073240:1:exon
so has part: feature:1073316-1073408:1:exon
so has part: feature:1073505-1073667:1:exon
so has part: feature:1073952-1074063:1:exon
so has part: feature:1074203-1074265:1:exon
so has part: feature:1074425-1074477:1:exon
so has part: feature:1074556-1074643:1:exon
so has part: feature:1074759-1074844:1:exon
so has part: feature:1074934-1075394:1:exon
so has part: feature:1075499-1075628:1:exon
so has part: feature:1075705-1075898:1:exon
so has part: feature:1075979-1076060:1:exon
so has part: feature:1076140-1076244:1:exon
so has part: feature:1076490-1076565:1:exon

XP_030812205.1
type: Protein
SIO_000068: ncbiprotein

position:1076565:1
position: 1076565
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1072587-1072700:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1073168-1073240:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1073316-1073408:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1073505-1073667:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1073952-1074063:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1074203-1074265:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1074425-1074477:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1074556-1074643:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1074759-1074844:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1074934-1075394:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1075499-1075628:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1075705-1075898:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1075979-1076060:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1076140-1076244:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1076490-1076565:1:exon

SPATA2L
type: Gene
subclass of: SO_0000704
RO_0002162: 87175
gene: SPATA2L
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1076986..1078229
location: region:1076986-1078229:1
so has part: feature:1076986-1078229:1:exon
subclass of: SO_0000010

115908052
type: Gene
SIO_000068: ncbigene

position:1076986:1
position: 1076986
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1078229:1
position: 1078229
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1076986-1078229:1:exon

SPATA2L
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 87175
gene: SPATA2L
product: spermatogenesis associated 2 like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins
transcript id: XM_030956346.1
SIO_010081: SPATA2L
subclass of: SO_0000673
so part of: SPATA2L
location: join(1076986..1077333,1077411..1078229)
location: region:1076986-1078229:1
so has part: feature:1076986-1077333:1:exon
so has part: feature:1077411-1078229:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1076986-1077333:1:exon

position:1077333:1
position: 1077333
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1077411-1078229:1:exon

position:1077411:1
position: 1077411
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

SPATA2L
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 87175
gene: SPATA2L
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: spermatogenesis-associated protein 2-like protein
translation: MCAGSALRQEHRQDYGQELRQEFHREYRRSLQREFGPAGTCPGPAVAERLRQRLQQEPALLEALQEDALALLARGLRDQPDPGLALRGLASAFRLLELAAVNLYLFPWRREFGTIPTFSGAYVHLLRPALPEADLVRSLGRLGYERRERHRLAVGRLPPGPALIAAAVGFLACRLECEILAELALQLRGPRAEELLEARHRAGGAKGCLETLQDLGMRHRVAADCGDGVDLYQERPDSPEDTGSKDTAPPALWRDPQNLITRGWGHCDSTLGSEPVGSADPDTSSHLFPEPELVGTGRSPQVPGEPQDTPQATPELPCYQLHSCLQQGMLPSYCCSTCRQLHGGGCALGRACRSQHRGQELRGERQQRLWLQRTELDMLLAQGSVPHS
SIO_010081: SPATA2L
subclass of: SO_0000673
so part of: SPATA2L
location: join(1076986..1077333,1077411..1078229)
location: region:1076986-1078229:1
so has part: feature:1076986-1077333:1:exon
so has part: feature:1077411-1078229:1:exon

XP_030812206.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1076986-1077333:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1077411-1078229:1:exon

CDK10
type: Gene
subclass of: SO_0000704
RO_0002162: 87175
gene: CDK10
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1078708..1081778)
location: region:1078708-1081778:-1
so has part: feature:1078708-1081778:-1:exon
subclass of: SO_0000010

115907861
type: Gene
SIO_000068: ncbigene

position:1078708:-1
position: 1078708
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1081778:-1
position: 1081778
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1078708-1081778:-1:exon

CDK10
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 87175
gene: CDK10
product: cyclin dependent kinase 10
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 13 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_030956045.1
SIO_010081: CDK10
subclass of: SO_0000673
so part of: CDK10
location: complement(join(1078708..1079085,1079162..1079214,1079314..1079453,1079534..1079657,1079742..1079801,1079879..1079948,1080044..1080096,1080246..1080313,1080649..1080730,1080847..1080949,1081037..1081108,1081462..1081534,1081639..1081778))
location: region:1078708-1081778:-1
so has part: feature:1081639-1081778:-1:exon
so has part: feature:1081462-1081534:-1:exon
so has part: feature:1081037-1081108:-1:exon
so has part: feature:1080847-1080949:-1:exon
so has part: feature:1080649-1080730:-1:exon
so has part: feature:1080246-1080313:-1:exon
so has part: feature:1080044-1080096:-1:exon
so has part: feature:1079879-1079948:-1:exon
so has part: feature:1079742-1079801:-1:exon
so has part: feature:1079534-1079657:-1:exon
so has part: feature:1079314-1079453:-1:exon
so has part: feature:1079162-1079214:-1:exon
so has part: feature:1078708-1079085:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1081639-1081778:-1:exon

position:1081639:-1
position: 1081639
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1081462-1081534:-1:exon

position:1081462:-1
position: 1081462
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1081534:-1
position: 1081534
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1081037-1081108:-1:exon

position:1081037:-1
position: 1081037
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1081108:-1
position: 1081108
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1080847-1080949:-1:exon

position:1080847:-1
position: 1080847
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1080949:-1
position: 1080949
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1080649-1080730:-1:exon

position:1080649:-1
position: 1080649
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1080730:-1
position: 1080730
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1080246-1080313:-1:exon

position:1080246:-1
position: 1080246
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1080313:-1
position: 1080313
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1080044-1080096:-1:exon

position:1080044:-1
position: 1080044
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1080096:-1
position: 1080096
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1079879-1079948:-1:exon

position:1079879:-1
position: 1079879
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1079948:-1
position: 1079948
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:1079742-1079801:-1:exon

position:1079742:-1
position: 1079742
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1079801:-1
position: 1079801
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:1079534-1079657:-1:exon

position:1079534:-1
position: 1079534
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1079657:-1
position: 1079657
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:1079314-1079453:-1:exon

position:1079314:-1
position: 1079314
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1079453:-1
position: 1079453
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:1079162-1079214:-1:exon

position:1079162:-1
position: 1079162
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1079214:-1
position: 1079214
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:1078708-1079085:-1:exon

position:1079085:-1
position: 1079085
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

CDK10
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 87175
gene: CDK10
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: cyclin-dependent kinase 10
translation: MAAAEAGPEPAPGPAEPELEPLRLRRLRGDGFFEVPAADRLGRCRSVKEFEKLNRIGEGTYGIVYRARDTLTNETVALKKVRMDNEKDGMPISSLREITLLLQLQHPNIVELKDVVVGNHLESIFLVMGYCEQDLASLLENMQTPFSEAQVKCIILQVLKGLQYLHENYIIHRDLKVSNLLMTDKGCVKIADFGLARTYGMPPKPMTPKVVTLWYRAPELLLGMTTQTTSIDMWAAGCILAELLAHKPLLPGTSEIHQIDLIVQLLGTPNENIWPGFSKLPLATQYTLRKQPYNNLKHRFPWLSEAGLRLLNFLFMYDPKKRATAKDCLESSYFKEKPLPCEPELMPTFPHHRNKRAASTAVESQAKRSKP
SIO_010081: CDK10
subclass of: SO_0000673
so part of: CDK10
location: complement(join(1078988..1079085,1079162..1079214,1079314..1079453,1079534..1079657,1079742..1079801,1079879..1079948,1080044..1080096,1080246..1080313,1080649..1080730,1080847..1080949,1081037..1081108,1081462..1081534,1081639..1081758))
location: region:1078988-1081758:-1
so has part: feature:1081639-1081758:-1:exon
so has part: feature:1081462-1081534:-1:exon
so has part: feature:1081037-1081108:-1:exon
so has part: feature:1080847-1080949:-1:exon
so has part: feature:1080649-1080730:-1:exon
so has part: feature:1080246-1080313:-1:exon
so has part: feature:1080044-1080096:-1:exon
so has part: feature:1079879-1079948:-1:exon
so has part: feature:1079742-1079801:-1:exon
so has part: feature:1079534-1079657:-1:exon
so has part: feature:1079314-1079453:-1:exon
so has part: feature:1079162-1079214:-1:exon
so has part: feature:1078988-1079085:-1:exon

XP_030811905.1
type: Protein
SIO_000068: ncbiprotein

position:1078988:-1
position: 1078988
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1081758:-1
position: 1081758
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1081639-1081758:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1081462-1081534:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1081037-1081108:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1080847-1080949:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1080649-1080730:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1080246-1080313:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1080044-1080096:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1079879-1079948:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1079742-1079801:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1079534-1079657:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1079314-1079453:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1079162-1079214:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1078988-1079085:-1:exon

CHMP1A
type: Gene
subclass of: SO_0000704
RO_0002162: 87175
gene: CHMP1A
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1082040..1087282
location: region:1082040-1087282:1
so has part: feature:1082040-1087282:1:exon
subclass of: SO_0000010

115907797
type: Gene
SIO_000068: ncbigene

position:1082040:1
position: 1082040
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1087282:1
position: 1087282
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1082040-1087282:1:exon

CHMP1A
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 87175
gene: CHMP1A
product: charged multivesicular body protein 1A
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 ESTs, 20 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
transcript id: XM_030955929.1
SIO_010081: CHMP1A
subclass of: SO_0000673
so part of: CHMP1A
location: join(1082040..1082142,1082321..1082340,1082816..1082893,1083434..1083580,1084395..1084523,1084601..1084788,1085923..1087282)
location: region:1082040-1087282:1
so has part: feature:1082040-1082142:1:exon
so has part: feature:1082321-1082340:1:exon
so has part: feature:1082816-1082893:1:exon
so has part: feature:1083434-1083580:1:exon
so has part: feature:1084395-1084523:1:exon
so has part: feature:1084601-1084788:1:exon
so has part: feature:1085923-1087282:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1082040-1082142:1:exon

position:1082142:1
position: 1082142
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1082321-1082340:1:exon

position:1082321:1
position: 1082321
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1082340:1
position: 1082340
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1082816-1082893:1:exon

position:1082816:1
position: 1082816
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1082893:1
position: 1082893
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1083434-1083580:1:exon

position:1083434:1
position: 1083434
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1083580:1
position: 1083580
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1084395-1084523:1:exon

position:1084395:1
position: 1084395
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1084523:1
position: 1084523
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1084601-1084788:1:exon

position:1084601:1
position: 1084601
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1084788:1
position: 1084788
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1085923-1087282:1:exon

position:1085923:1
position: 1085923
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

CHMP1A
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 87175
gene: CHMP1A
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: charged multivesicular body protein 1a
translation: MDDTLFQLKFTAKQLEKLSKKAEKDSKAEQAKVKKALQQKNVECARVYAENAIRKRNEGLNWLRMASRVDAVASKVQTAVTMKGVTKNMAQVTKALDKALSSMDLQKVSAVMDKFEQQVQNLDVHTSVMEDSMSSATTLSTPQEQVDSLIVQIAEENGLEIMDQLSQLPEGASALGESSVRSQEDQLSRRLAALRN
SIO_010081: CHMP1A
subclass of: SO_0000673
so part of: CHMP1A
location: join(1082136..1082142,1082321..1082340,1082816..1082893,1083434..1083580,1084395..1084523,1084601..1084788,1085923..1085944)
location: region:1082136-1085944:1
so has part: feature:1082136-1082142:1:exon
so has part: feature:1082321-1082340:1:exon
so has part: feature:1082816-1082893:1:exon
so has part: feature:1083434-1083580:1:exon
so has part: feature:1084395-1084523:1:exon
so has part: feature:1084601-1084788:1:exon
so has part: feature:1085923-1085944:1:exon

XP_030811789.1
type: Protein
SIO_000068: ncbiprotein

position:1082136:1
position: 1082136
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1085944:1
position: 1085944
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1082136-1082142:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1082321-1082340:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1082816-1082893:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1083434-1083580:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1084395-1084523:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1084601-1084788:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1085923-1085944:1:exon

DPEP1
type: Gene
subclass of: SO_0000704
RO_0002162: 87175
gene: DPEP1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1088090..1092917)
location: region:1088090-1092917:-1
so has part: feature:1088090-1092917:-1:exon
subclass of: SO_0000010

115907862
type: Gene
SIO_000068: ncbigene

position:1088090:-1
position: 1088090
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1092917:-1
position: 1092917
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1088090-1092917:-1:exon

DPEP1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 87175
gene: DPEP1
product: dipeptidase 1, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_030956047.1
SIO_010081: DPEP1
subclass of: SO_0000673
so part of: DPEP1
location: complement(join(1088090..1088605,1088868..1089003,1089157..1089232,1089307..1089391,1089465..1089641,1089931..1090000,1090094..1090244,1090402..1090563,1090757..1090889,1091905..1092042,1092409..1092917))
location: region:1088090-1092917:-1
so has part: feature:1092409-1092917:-1:exon
so has part: feature:1091905-1092042:-1:exon
so has part: feature:1090757-1090889:-1:exon
so has part: feature:1090402-1090563:-1:exon
so has part: feature:1090094-1090244:-1:exon
so has part: feature:1089931-1090000:-1:exon
so has part: feature:1089465-1089641:-1:exon
so has part: feature:1089307-1089391:-1:exon
so has part: feature:1089157-1089232:-1:exon
so has part: feature:1088868-1089003:-1:exon
so has part: feature:1088090-1088605:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1092409-1092917:-1:exon

position:1092409:-1
position: 1092409
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1091905-1092042:-1:exon

position:1091905:-1
position: 1091905
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1092042:-1
position: 1092042
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1090757-1090889:-1:exon

position:1090757:-1
position: 1090757
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1090889:-1
position: 1090889
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1090402-1090563:-1:exon

position:1090402:-1
position: 1090402
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1090563:-1
position: 1090563
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1090094-1090244:-1:exon

position:1090094:-1
position: 1090094
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1090244:-1
position: 1090244
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1089931-1090000:-1:exon

position:1089931:-1
position: 1089931
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1090000:-1
position: 1090000
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1089465-1089641:-1:exon

position:1089465:-1
position: 1089465
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1089641:-1
position: 1089641
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1089307-1089391:-1:exon

position:1089307:-1
position: 1089307
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1089391:-1
position: 1089391
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:1089157-1089232:-1:exon

position:1089157:-1
position: 1089157
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1089232:-1
position: 1089232
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:1088868-1089003:-1:exon

position:1088868:-1
position: 1088868
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1089003:-1
position: 1089003
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:1088090-1088605:-1:exon

position:1088605:-1
position: 1088605
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

DPEP1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 87175
gene: DPEP1
product: dipeptidase 1, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_030956046.1
SIO_010081: DPEP1
subclass of: SO_0000673
so part of: DPEP1
location: complement(join(1088090..1088605,1088868..1089003,1089157..1089232,1089307..1089391,1089465..1089641,1089931..1090000,1090094..1090244,1090402..1090563,1090757..1090889,1091905..1092045,1092409..1092917))
location: region:1088090-1092917:-1
so has part: feature:1092409-1092917:-1:exon
so has part: feature:1091905-1092045:-1:exon
so has part: feature:1090757-1090889:-1:exon
so has part: feature:1090402-1090563:-1:exon
so has part: feature:1090094-1090244:-1:exon
so has part: feature:1089931-1090000:-1:exon
so has part: feature:1089465-1089641:-1:exon
so has part: feature:1089307-1089391:-1:exon
so has part: feature:1089157-1089232:-1:exon
so has part: feature:1088868-1089003:-1:exon
so has part: feature:1088090-1088605:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1092409-1092917:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1091905-1092045:-1:exon

position:1092045:-1
position: 1092045
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1090757-1090889:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1090402-1090563:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1090094-1090244:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1089931-1090000:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1089465-1089641:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1089307-1089391:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1089157-1089232:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1088868-1089003:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1088090-1088605:-1:exon

DPEP1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 87175
gene: DPEP1
product: dipeptidase 1, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 16 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_030956048.1
SIO_010081: DPEP1
subclass of: SO_0000673
so part of: DPEP1
location: complement(join(1088090..1088605,1088868..1089003,1089157..1089232,1089307..1089391,1089465..1089641,1089931..1090000,1090094..1090244,1090402..1090534,1090757..1090889,1091905..1092042,1092409..1092545))
location: region:1088090-1092545:-1
so has part: feature:1092409-1092545:-1:exon
so has part: feature:1091905-1092042:-1:exon
so has part: feature:1090757-1090889:-1:exon
so has part: feature:1090402-1090534:-1:exon
so has part: feature:1090094-1090244:-1:exon
so has part: feature:1089931-1090000:-1:exon
so has part: feature:1089465-1089641:-1:exon
so has part: feature:1089307-1089391:-1:exon
so has part: feature:1089157-1089232:-1:exon
so has part: feature:1088868-1089003:-1:exon
so has part: feature:1088090-1088605:-1:exon

position:1092545:-1
position: 1092545
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1092409-1092545:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1091905-1092042:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1090757-1090889:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1090402-1090534:-1:exon

position:1090534:-1
position: 1090534
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1090094-1090244:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1089931-1090000:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1089465-1089641:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1089307-1089391:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1089157-1089232:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1088868-1089003:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1088090-1088605:-1:exon

DPEP1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 87175
gene: DPEP1
product: dipeptidase 1, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 16 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_030956049.1
SIO_010081: DPEP1
subclass of: SO_0000673
so part of: DPEP1
location: complement(join(1088090..1088605,1088868..1089003,1089157..1089232,1089307..1089391,1089465..1089641,1089931..1090000,1090094..1090244,1090402..1090534,1090757..1090889,1091905..1092045,1092409..1092518))
location: region:1088090-1092518:-1
so has part: feature:1092409-1092518:-1:exon
so has part: feature:1091905-1092045:-1:exon
so has part: feature:1090757-1090889:-1:exon
so has part: feature:1090402-1090534:-1:exon
so has part: feature:1090094-1090244:-1:exon
so has part: feature:1089931-1090000:-1:exon
so has part: feature:1089465-1089641:-1:exon
so has part: feature:1089307-1089391:-1:exon
so has part: feature:1089157-1089232:-1:exon
so has part: feature:1088868-1089003:-1:exon
so has part: feature:1088090-1088605:-1:exon

position:1092518:-1
position: 1092518
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1092409-1092518:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1091905-1092045:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1090757-1090889:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1090402-1090534:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1090094-1090244:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1089931-1090000:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1089465-1089641:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1089307-1089391:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1089157-1089232:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1088868-1089003:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1088090-1088605:-1:exon

DPEP1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 87175
gene: DPEP1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: dipeptidase 1 isoform X2
translation: MRCPAAPAISTWLHAIPRSATKALLGRTAQLEPAEMRSSRSTAVPQFPLGTLQRDRSVGHPSEHEGAAAAAPQLGPATPLLAPGHAAAPAPRRGWLWGAGAHPSPVTARKPEKFIHSHRRQGLPECPGAGQQPAGEDARRERVGAGAGAGAGTAQHWTAAPGGGRAHHEHHAGHRRAQRPALAAPPEVQQPAEAASRQPDPAERHPHQHPQTAPRARGRAGAHTDGVPGQFWSVFVPCETQNKDAVRRTLEQMDVVQRMCDLYPETFSCVTDSSGIREAFRAGKVASLIGVEGGHSIDSSLGVLRTLYRLGARYMTLTHSCNTPWADNWLVDTSEEEPVHHGLSPFGKMVVEEMNRLGMIVDLAHVSVDTMKVVLNISKAPVIFSHSSAYSICQHRRNVPDDVLQLVASTGSLVMVNFYNAYVTCSDKAKLSDVADHMDHVKKVAGAQAVGFGGDYDGVTGVPTGLEDISKYPMLVAELLARNWTEQEVRGALAENLLRVFSRVEEVKRSLQGTAPHETPIAFEELEGSCRTSYGYPSGAGTSRAPPAALAPPLALALLLAVLS
SIO_010081: DPEP1
subclass of: SO_0000673
so part of: DPEP1
location: complement(join(1088429..1088605,1088868..1089003,1089157..1089232,1089307..1089391,1089465..1089641,1089931..1090000,1090094..1090244,1090402..1090563,1090757..1090889,1091905..1092042,1092409..1092798))
location: region:1088429-1092798:-1
so has part: feature:1092409-1092798:-1:exon
so has part: feature:1091905-1092042:-1:exon
so has part: feature:1090757-1090889:-1:exon
so has part: feature:1090402-1090563:-1:exon
so has part: feature:1090094-1090244:-1:exon
so has part: feature:1089931-1090000:-1:exon
so has part: feature:1089465-1089641:-1:exon
so has part: feature:1089307-1089391:-1:exon
so has part: feature:1089157-1089232:-1:exon
so has part: feature:1088868-1089003:-1:exon
so has part: feature:1088429-1088605:-1:exon

XP_030811907.1
type: Protein
SIO_000068: ncbiprotein

position:1088429:-1
position: 1088429
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1092798:-1
position: 1092798
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1092409-1092798:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1091905-1092042:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1090757-1090889:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1090402-1090563:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1090094-1090244:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1089931-1090000:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1089465-1089641:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1089307-1089391:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1089157-1089232:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1088868-1089003:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1088429-1088605:-1:exon

DPEP1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 87175
gene: DPEP1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: dipeptidase 1 isoform X1
translation: MRCPAAPAISTWLHAIPRSATKALLGRTAQLEPAEMRSSRSTAVPQFPLGTLQRDRSVGHPSEHEGAAAAAPQLGPATPLLAPGHAAAPAPRRGWLWGAGAHPSPVTARKPEKFIHSHRRQGLPECPGAGQQQPAGEDARRERVGAGAGAGAGTAQHWTAAPGGGRAHHEHHAGHRRAQRPALAAPPEVQQPAEAASRQPDPAERHPHQHPQTAPRARGRAGAHTDGVPGQFWSVFVPCETQNKDAVRRTLEQMDVVQRMCDLYPETFSCVTDSSGIREAFRAGKVASLIGVEGGHSIDSSLGVLRTLYRLGARYMTLTHSCNTPWADNWLVDTSEEEPVHHGLSPFGKMVVEEMNRLGMIVDLAHVSVDTMKVVLNISKAPVIFSHSSAYSICQHRRNVPDDVLQLVASTGSLVMVNFYNAYVTCSDKAKLSDVADHMDHVKKVAGAQAVGFGGDYDGVTGVPTGLEDISKYPMLVAELLARNWTEQEVRGALAENLLRVFSRVEEVKRSLQGTAPHETPIAFEELEGSCRTSYGYPSGAGTSRAPPAALAPPLALALLLAVLS
SIO_010081: DPEP1
subclass of: SO_0000673
so part of: DPEP1
location: complement(join(1088429..1088605,1088868..1089003,1089157..1089232,1089307..1089391,1089465..1089641,1089931..1090000,1090094..1090244,1090402..1090563,1090757..1090889,1091905..1092045,1092409..1092798))
location: region:1088429-1092798:-1
so has part: feature:1092409-1092798:-1:exon
so has part: feature:1091905-1092045:-1:exon
so has part: feature:1090757-1090889:-1:exon
so has part: feature:1090402-1090563:-1:exon
so has part: feature:1090094-1090244:-1:exon
so has part: feature:1089931-1090000:-1:exon
so has part: feature:1089465-1089641:-1:exon
so has part: feature:1089307-1089391:-1:exon
so has part: feature:1089157-1089232:-1:exon
so has part: feature:1088868-1089003:-1:exon
so has part: feature:1088429-1088605:-1:exon

XP_030811906.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1092409-1092798:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1091905-1092045:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1090757-1090889:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1090402-1090563:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1090094-1090244:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1089931-1090000:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1089465-1089641:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1089307-1089391:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1089157-1089232:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1088868-1089003:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1088429-1088605:-1:exon

DPEP1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 87175
gene: DPEP1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: dipeptidase 1 isoform X3
translation: MRPLRRHGGGGSGGLEPIPAPSPHASRKSSSTAIAGRDCPSVPGPGSSQREKMPGGSVWVLVLALALALPSTGQQHLEEAERIMSTTPVIDGHNDLPWQLLRKFNNQLRLPAANLTLLNDTHTNIPKLHQGHVGGQFWSVFVPCETQNKDAVRRTLEQMDVVQRMCDLYPETFSCVTDSSGIREAFRAGKVASLIGVEGGHSIDSSLGVLRTLYRLGARYMTLTHSCNTPWADNWLVDTSEEEPVHHGLSPFGKMVVEEMNRLGMIVDLAHVSVDTMKVVLNISKAPVIFSHSSAYSICQHRRNVPDDVLQLVASTGSLVMVNFYNAYVTCSDKAKLSDVADHMDHVKKVAGAQAVGFGGDYDGVTGVPTGLEDISKYPMLVAELLARNWTEQEVRGALAENLLRVFSRVEEVKRSLQGTAPHETPIAFEELEGSCRTSYGYPSGAGTSRAPPAALAPPLALALLLAVLS
SIO_010081: DPEP1
subclass of: SO_0000673
so part of: DPEP1
location: complement(join(1088429..1088605,1088868..1089003,1089157..1089232,1089307..1089391,1089465..1089641,1089931..1090000,1090094..1090244,1090402..1090534,1090757..1090889,1091905..1092042,1092409..1092545))
location: region:1088429-1092545:-1
so has part: feature:1092409-1092545:-1:exon
so has part: feature:1091905-1092042:-1:exon
so has part: feature:1090757-1090889:-1:exon
so has part: feature:1090402-1090534:-1:exon
so has part: feature:1090094-1090244:-1:exon
so has part: feature:1089931-1090000:-1:exon
so has part: feature:1089465-1089641:-1:exon
so has part: feature:1089307-1089391:-1:exon
so has part: feature:1089157-1089232:-1:exon
so has part: feature:1088868-1089003:-1:exon
so has part: feature:1088429-1088605:-1:exon

XP_030811908.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1092409-1092545:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1091905-1092042:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1090757-1090889:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1090402-1090534:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1090094-1090244:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1089931-1090000:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1089465-1089641:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1089307-1089391:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1089157-1089232:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1088868-1089003:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1088429-1088605:-1:exon

DPEP1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 87175
gene: DPEP1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: dipeptidase 1 isoform X4
translation: MPGGSVWVLVLALALALPSTGQQHLEEAERIMSTTPVIDGHNDLPWQLLRKFNNQLRLPAANLTLLNDTHTNIPKLHQGHVGGQFWSVFVPCETQNKDAVRRTLEQMDVVQRMCDLYPETFSCVTDSSGIREAFRAGKVASLIGVEGGHSIDSSLGVLRTLYRLGARYMTLTHSCNTPWADNWLVDTSEEEPVHHGLSPFGKMVVEEMNRLGMIVDLAHVSVDTMKVVLNISKAPVIFSHSSAYSICQHRRNVPDDVLQLVASTGSLVMVNFYNAYVTCSDKAKLSDVADHMDHVKKVAGAQAVGFGGDYDGVTGVPTGLEDISKYPMLVAELLARNWTEQEVRGALAENLLRVFSRVEEVKRSLQGTAPHETPIAFEELEGSCRTSYGYPSGAGTSRAPPAALAPPLALALLLAVLS
SIO_010081: DPEP1
subclass of: SO_0000673
so part of: DPEP1
location: complement(join(1088429..1088605,1088868..1089003,1089157..1089232,1089307..1089391,1089465..1089641,1089931..1090000,1090094..1090244,1090402..1090534,1090757..1090889,1091905..1092023))
location: region:1088429-1092023:-1
so has part: feature:1091905-1092023:-1:exon
so has part: feature:1090757-1090889:-1:exon
so has part: feature:1090402-1090534:-1:exon
so has part: feature:1090094-1090244:-1:exon
so has part: feature:1089931-1090000:-1:exon
so has part: feature:1089465-1089641:-1:exon
so has part: feature:1089307-1089391:-1:exon
so has part: feature:1089157-1089232:-1:exon
so has part: feature:1088868-1089003:-1:exon
so has part: feature:1088429-1088605:-1:exon

XP_030811909.1
type: Protein
SIO_000068: ncbiprotein

position:1092023:-1
position: 1092023
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1091905-1092023:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1090757-1090889:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1090402-1090534:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1090094-1090244:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1089931-1090000:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1089465-1089641:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1089307-1089391:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1089157-1089232:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1088868-1089003:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1088429-1088605:-1:exon

LOC115907882
type: Gene
subclass of: SO_0000704
RO_0002162: 87175
gene: LOC115907882
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1093056..1095094
location: region:1093056-1095094:1
so has part: feature:1093056-1095094:1:exon
subclass of: SO_0000010

115907882
type: Gene
SIO_000068: ncbigene

position:1093056:1
position: 1093056
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1095094:1
position: 1095094
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1093056-1095094:1:exon

LOC115907882
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 87175
gene: LOC115907882
product: sulfotransferase 2B1-like
exception: unclassified transcription discrepancy
note: The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: deleted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 13 Proteins, and 96% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
transcript id: XM_030956078.1
SIO_010081: LOC115907882
subclass of: SO_0000673
so part of: LOC115907882
location: join(1093056..1093288,1093730..1093938,1094086..1094212,1094282..1094376,1094447..1094627,1094711..1095094)
location: region:1093056-1095094:1
so has part: feature:1093056-1093288:1:exon
so has part: feature:1093730-1093938:1:exon
so has part: feature:1094086-1094212:1:exon
so has part: feature:1094282-1094376:1:exon
so has part: feature:1094447-1094627:1:exon
so has part: feature:1094711-1095094:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1093056-1093288:1:exon

position:1093288:1
position: 1093288
reference: sequence
type: ForwardStrandPosition
type: ExactPosition