Camarhynchus parvulus chromosome 10, STF_HiC, whole genome shotgun sequence.
type: Entry
definition: Camarhynchus parvulus chromosome 10, STF_HiC, whole genome shotgun sequence.
sequence version: NC_044580.1
sequence date: 2019-09-26
sequence: sequence
division: CON
label: NC_044580.1
type: RefSeq
SIO_000068: refseq
dblink: PRJNA566393
dblink: SAMEA5603054
keyword: WGS
keyword: RefSeq
source: Camarhynchus parvulus
organism: Camarhynchus parvulus
taxonomy: Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Passeriformes; Thraupidae; Camarhynchus.
comment: REFSEQ INFORMATION: The reference sequence is identical to\nLR595707.1.\nAssembly name: STF_HiC\nThe genomic sequence for this RefSeq record is from the\nwhole-genome assembly released by the UPPSALA UNIVERISTY on\n2019/09/06. The original whole-genome shotgun project has the\naccession CABFNF000000000.1.\n\n##Genome-Annotation-Data-START##\nAnnotation Provider :: NCBI\nAnnotation Status :: Full annotation\nAnnotation Name :: Camarhynchus parvulus Annotation\n Release 100\nAnnotation Version :: 100\nAnnotation Pipeline :: NCBI eukaryotic genome annotation\n pipeline\nAnnotation Software Version :: 8.2\nAnnotation Method :: Best-placed RefSeq; Gnomon\nFeatures Annotated :: Gene; mRNA; CDS; ncRNA\n##Genome-Annotation-Data-END##

sequence
subclass of: SO_0000340
sequence length: 20315087
topology: linear
so has quality: SO_0000987
location: 1..20315087
location: region:1-20315087:1
RO_0002162: 87175

NC_044580
type: RefSeq
SIO_000068: refseq

PRJNA566393
type: BioProject
SIO_000068: bioproject

SAMEA5603054
type: BioSample
SIO_000068: biosample

position:1:1
position: 1
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:20315087:1
position: 20315087
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

feature:1-20315087:1:source
so part of: sequence
organism: Camarhynchus parvulus
mol type: genomic DNA
chromosome: 10

87175
type: Taxonomy
SIO_000068: taxonomy

KLF13
type: Gene
subclass of: SO_0000704
RO_0002162: 87175
gene: KLF13
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 41525..71568
location: region:41525-71568:1
so has part: feature:41525-71568:1:exon
subclass of: SO_0000010

115907419
type: Gene
SIO_000068: ncbigene

position:41525:1
position: 41525
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:71568:1
position: 71568
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:41525-71568:1:exon

KLF13
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 87175
gene: KLF13
product: Kruppel like factor 13
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 18 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_030955327.1
SIO_010081: KLF13
subclass of: SO_0000673
so part of: KLF13
location: join(41525..42470,69171..71568)
location: region:41525-71568:1
so has part: feature:41525-42470:1:exon
so has part: feature:69171-71568:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:41525-42470:1:exon

position:42470:1
position: 42470
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:69171-71568:1:exon

position:69171:1
position: 69171
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

KLF13
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 87175
gene: KLF13
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: Krueppel-like factor 13
translation: MATAAYVDHFAAECLVSMSSRAVIHSPKGEPDPQPDAAILPSSNGEDRREVRETGKDNGSSLLVVASILADLNQHVPNSPALRTEKTETLDITEQIHISIAPKEFGEESLSSAGKNGGERAATPTSLAAVTEPSPRQKNKRIRSWTDPGSPQKKHKCHYVGCEKVYGKSSHLKAHLRTHTGERPFECNWQGCNKKFARSDELARHYRTHTGEKKFSCPLCEKRFMRSDHLTKHARRHANFHPSMLKRRSGSGSRTGSVSDYSRSDASSPTISPASSP
SIO_010081: KLF13
subclass of: SO_0000673
so part of: KLF13
location: join(41930..42470,69171..69463)
location: region:41930-69463:1
so has part: feature:41930-42470:1:exon
so has part: feature:69171-69463:1:exon

XP_030811187.1
type: Protein
SIO_000068: ncbiprotein

position:41930:1
position: 41930
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:69463:1
position: 69463
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:41930-42470:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:69171-69463:1:exon

OTUD7A
type: Gene
subclass of: SO_0000704
RO_0002162: 87175
gene: OTUD7A
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(89789..190299)
location: region:89789-190299:-1
so has part: feature:89789-190299:-1:exon
subclass of: SO_0000010

115907560
type: Gene
SIO_000068: ncbigene

position:89789:-1
position: 89789
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:190299:-1
position: 190299
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:89789-190299:-1:exon

OTUD7A
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 87175
gene: OTUD7A
product: OTU deubiquitinase 7A
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 12 ESTs, 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_030955519.1
SIO_010081: OTUD7A
subclass of: SO_0000673
so part of: OTUD7A
location: complement(join(89789..91323,93095..93179,93428..93542,97701..97850,99373..99500,105239..105351,106077..106204,107495..107596,112661..112879,114775..114957,125102..125256,126354..126510,132231..132363,147769..147874,148438..148555,153464..153539,190229..190299))
location: region:89789-190299:-1
so has part: feature:190229-190299:-1:exon
so has part: feature:153464-153539:-1:exon
so has part: feature:148438-148555:-1:exon
so has part: feature:147769-147874:-1:exon
so has part: feature:132231-132363:-1:exon
so has part: feature:126354-126510:-1:exon
so has part: feature:125102-125256:-1:exon
so has part: feature:114775-114957:-1:exon
so has part: feature:112661-112879:-1:exon
so has part: feature:107495-107596:-1:exon
so has part: feature:106077-106204:-1:exon
so has part: feature:105239-105351:-1:exon
so has part: feature:99373-99500:-1:exon
so has part: feature:97701-97850:-1:exon
so has part: feature:93428-93542:-1:exon
so has part: feature:93095-93179:-1:exon
so has part: feature:89789-91323:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:190229-190299:-1:exon

position:190229:-1
position: 190229
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:153464-153539:-1:exon

position:153464:-1
position: 153464
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:153539:-1
position: 153539
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:148438-148555:-1:exon

position:148438:-1
position: 148438
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:148555:-1
position: 148555
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:147769-147874:-1:exon

position:147769:-1
position: 147769
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:147874:-1
position: 147874
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:132231-132363:-1:exon

position:132231:-1
position: 132231
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:132363:-1
position: 132363
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:126354-126510:-1:exon

position:126354:-1
position: 126354
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:126510:-1
position: 126510
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:125102-125256:-1:exon

position:125102:-1
position: 125102
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:125256:-1
position: 125256
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:114775-114957:-1:exon

position:114775:-1
position: 114775
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:114957:-1
position: 114957
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:112661-112879:-1:exon

position:112661:-1
position: 112661
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:112879:-1
position: 112879
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:107495-107596:-1:exon

position:107495:-1
position: 107495
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:107596:-1
position: 107596
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:106077-106204:-1:exon

position:106077:-1
position: 106077
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:106204:-1
position: 106204
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:105239-105351:-1:exon

position:105239:-1
position: 105239
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:105351:-1
position: 105351
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:99373-99500:-1:exon

position:99373:-1
position: 99373
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:99500:-1
position: 99500
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:97701-97850:-1:exon

position:97701:-1
position: 97701
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:97850:-1
position: 97850
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:93428-93542:-1:exon

position:93428:-1
position: 93428
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:93542:-1
position: 93542
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:93095-93179:-1:exon

position:93095:-1
position: 93095
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:93179:-1
position: 93179
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:89789-91323:-1:exon

position:91323:-1
position: 91323
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

OTUD7A
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 87175
gene: OTUD7A
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: OTU domain-containing protein 7A
translation: MTLDMDAVLSDFVRSTGAEPGLARDLLEGKNWDLTAALNDYEQLRQVHTANLPQVFNEGRFYKEQEPEQPPQVTKAERPCLQRQDDIAQEKRLSRGISHASSAIVSLARSHVANDCSNEQFPLEMPIYTFQLPDLSVYSEDFRSFIERDLIEQATMVALEQAGRLNWWSTVCTSCKRLLPLATTGDGNCLLHAASLGMWGFHDRDLVLRKALYTMMRSGAEREALKRRWRWQQTQQNKESGLVYTEEEWEREWNELLKLASSEPRTHFSKNGGTGGGVDNAEDPVYESLEEFHVFVLAHILRRPIVVVADTMLRDSGGEAFAPIPFGGIYLPLEVLPNRCHCSPLVLAYDQAHFSALVSMEQKDQQREQAVIPLTDSEHKLLPLHFAVDPGKDWEWGKDDNDNTRLANLILSLEAKLNLLHSYMNVTWIRIPSETRQAPLAQPESPTASAGEDVQSLADSMDSDRDSICSNSNGNNGKNGKEKEKDKQRKDKDKTRTDSVANKIGSLSKTLGIKLKKNMGGLGGLVHGKMSRVNSGNGKNGDTVEKVKEKKSKSRKGSKEESGQSASTSPSEKTTPSPTDRASSSPTEKVNAKHFSDKQSDPWKYSTDVKLSLNILRAAMQGERKFIFAGLLLTSHRHQFHEEMIGYYLTSAQERFNAEQEQKRKEAEKKAVLNGSSSRKLEPEAFSKEKLEPSPQDRASPVLPQSHTTQLVLKFKDRTSPTPGSFSSPSNSAKRSGPIPVSAHYSHTPPVQRQSVIHLHDVNSKPSSFQDDTYKPVVGTLKTCATYPQQNRSLSSQSYSPARLPGMRTVNTVESLSYARPAEHKSQTYTNGFNTGDIRDCLEYADEDAPQSWLNNDKNQGRSTVCPIYCIQQNRCKKENCSFYGRPETENYCSYCYKEELKRRERDSKGHRH
SIO_010081: OTUD7A
subclass of: SO_0000673
so part of: OTUD7A
location: complement(join(89890..91323,93095..93179,93428..93542,97701..97850,99373..99500,105239..105351,106077..106204,107495..107596,112661..112879,114775..114957,125102..125186))
location: region:89890-125186:-1
so has part: feature:125102-125186:-1:exon
so has part: feature:114775-114957:-1:exon
so has part: feature:112661-112879:-1:exon
so has part: feature:107495-107596:-1:exon
so has part: feature:106077-106204:-1:exon
so has part: feature:105239-105351:-1:exon
so has part: feature:99373-99500:-1:exon
so has part: feature:97701-97850:-1:exon
so has part: feature:93428-93542:-1:exon
so has part: feature:93095-93179:-1:exon
so has part: feature:89890-91323:-1:exon

XP_030811379.1
type: Protein
SIO_000068: ncbiprotein

position:89890:-1
position: 89890
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:125186:-1
position: 125186
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:125102-125186:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:114775-114957:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:112661-112879:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:107495-107596:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:106077-106204:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:105239-105351:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:99373-99500:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:97701-97850:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:93428-93542:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:93095-93179:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:89890-91323:-1:exon

GCNT3
type: Gene
subclass of: SO_0000704
RO_0002162: 87175
gene: GCNT3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 223492..224970
location: region:223492-224970:1
so has part: feature:223492-224970:1:exon
subclass of: SO_0000010

115907461
type: Gene
SIO_000068: ncbigene

position:223492:1
position: 223492
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:224970:1
position: 224970
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:223492-224970:1:exon

GCNT3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 87175
gene: GCNT3
product: glucosaminyl (N-acetyl) transferase 3, mucin type
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 40 Proteins, and 37% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_030955396.1
SIO_010081: GCNT3
subclass of: SO_0000673
so part of: GCNT3
location: 223492..224970
location: region:223492-224970:1
so has part: feature:223492-224970:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:223492-224970:1:exon

GCNT3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 87175
gene: GCNT3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: beta-1,3-galactosyl-O-glycosyl-glycoprotein beta-1,6-N-acetylglucosaminyltransferase 3
translation: MPWWQRAPAARRRWALLLGPLALLAAALALRGTVRPGPADHPRLYRELELSPSRSINCSGVVRGDQTAIQEAQLNNLEVANRRALPTPGEYLNITRDCRAFKETRRYIEFPLSQEEEEFPIAYSMIIHHKIDMFERLLRSVYAPQNVYCVHVDSKSPAAFQEAVRAIAACFPNVFVASRLESVVYASWSRVQADLNCMQDLLQSPVPWRYLINTCGTDFPIKTNAEIVRALQLLQGQNTMESERPSAAKQQRWEYHHEVGETISRTSQKKLPPPHSYPMFTGSAYNAVTRDFVQYIFKNPTAQKFLEWSKDSYSPDEYVWATLNRMPGVPGGTPLSDKFQLSDMNALPRLVKWEYLEGDMSKGAPYPPCTGRHQRSICIYGVGDVPWMLQQHHLLANKFDPEVDDAAVQCLEEYLRHKALYGRGL
SIO_010081: GCNT3
subclass of: SO_0000673
so part of: GCNT3
location: 223492..224769
location: region:223492-224769:1
so has part: feature:223492-224769:1:exon

XP_030811256.1
type: Protein
SIO_000068: ncbiprotein

position:224769:1
position: 224769
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:223492-224769:1:exon

GTF2A2
type: Gene
subclass of: SO_0000704
RO_0002162: 87175
gene: GTF2A2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(230619..235077)
location: region:230619-235077:-1
so has part: feature:230619-235077:-1:exon
subclass of: SO_0000010

115907633
type: Gene
SIO_000068: ncbigene

position:230619:-1
position: 230619
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:235077:-1
position: 235077
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:230619-235077:-1:exon

GTF2A2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 87175
gene: GTF2A2
product: general transcription factor IIA subunit 2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 mRNAs, 19 ESTs, 11 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
transcript id: XM_030955629.1
SIO_010081: GTF2A2
subclass of: SO_0000673
so part of: GTF2A2
location: complement(join(230619..230937,232604..232730,234022..234126,234611..234746,235037..235077))
location: region:230619-235077:-1
so has part: feature:235037-235077:-1:exon
so has part: feature:234611-234746:-1:exon
so has part: feature:234022-234126:-1:exon
so has part: feature:232604-232730:-1:exon
so has part: feature:230619-230937:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:235037-235077:-1:exon

position:235037:-1
position: 235037
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:234611-234746:-1:exon

position:234611:-1
position: 234611
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:234746:-1
position: 234746
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:234022-234126:-1:exon

position:234022:-1
position: 234022
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:234126:-1
position: 234126
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:232604-232730:-1:exon

position:232604:-1
position: 232604
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:232730:-1
position: 232730
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:230619-230937:-1:exon

position:230937:-1
position: 230937
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

GTF2A2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 87175
gene: GTF2A2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: transcription initiation factor IIA subunit 2
translation: MAYQLYRNTTLGNSLQESLDELIQSQQITPQLALQVLLQFDKAINSALAQRVRNRVNFRGSLNTYRFCDNVWTFVLNDVEFREVTELVKVDKVKIVACDGKNTGSNTAE
SIO_010081: GTF2A2
subclass of: SO_0000673
so part of: GTF2A2
location: complement(join(230912..230937,232604..232730,234022..234126,234611..234682))
location: region:230912-234682:-1
so has part: feature:234611-234682:-1:exon
so has part: feature:234022-234126:-1:exon
so has part: feature:232604-232730:-1:exon
so has part: feature:230912-230937:-1:exon

XP_030811489.1
type: Protein
SIO_000068: ncbiprotein

position:230912:-1
position: 230912
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:234682:-1
position: 234682
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:234611-234682:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:234022-234126:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:232604-232730:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:230912-230937:-1:exon

BNIP2
type: Gene
subclass of: SO_0000704
RO_0002162: 87175
gene: BNIP2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(237389..253945)
location: region:237389-253945:-1
so has part: feature:237389-253945:-1:exon
subclass of: SO_0000010

115907375
type: Gene
SIO_000068: ncbigene

position:237389:-1
position: 237389
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:253945:-1
position: 253945
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:237389-253945:-1:exon

BNIP2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 87175
gene: BNIP2
product: BCL2 interacting protein 2, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 ESTs, 16 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XM_030955238.1
SIO_010081: BNIP2
subclass of: SO_0000673
so part of: BNIP2
location: complement(join(237389..239883,243224..243322,243455..243541,244160..244291,244409..244511,245156..245332,247139..247312,248083..248150,248853..248983,249483..249620,253836..253945))
location: region:237389-253945:-1
so has part: feature:253836-253945:-1:exon
so has part: feature:249483-249620:-1:exon
so has part: feature:248853-248983:-1:exon
so has part: feature:248083-248150:-1:exon
so has part: feature:247139-247312:-1:exon
so has part: feature:245156-245332:-1:exon
so has part: feature:244409-244511:-1:exon
so has part: feature:244160-244291:-1:exon
so has part: feature:243455-243541:-1:exon
so has part: feature:243224-243322:-1:exon
so has part: feature:237389-239883:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:253836-253945:-1:exon

position:253836:-1
position: 253836
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:249483-249620:-1:exon

position:249483:-1
position: 249483
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:249620:-1
position: 249620
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:248853-248983:-1:exon

position:248853:-1
position: 248853
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:248983:-1
position: 248983
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:248083-248150:-1:exon

position:248083:-1
position: 248083
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:248150:-1
position: 248150
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:247139-247312:-1:exon

position:247139:-1
position: 247139
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:247312:-1
position: 247312
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:245156-245332:-1:exon

position:245156:-1
position: 245156
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:245332:-1
position: 245332
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:244409-244511:-1:exon

position:244409:-1
position: 244409
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:244511:-1
position: 244511
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:244160-244291:-1:exon

position:244160:-1
position: 244160
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:244291:-1
position: 244291
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:243455-243541:-1:exon

position:243455:-1
position: 243455
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:243541:-1
position: 243541
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:243224-243322:-1:exon

position:243224:-1
position: 243224
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:243322:-1
position: 243322
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:237389-239883:-1:exon

position:239883:-1
position: 239883
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

BNIP2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 87175
gene: BNIP2
product: BCL2 interacting protein 2, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 ESTs, 16 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XM_030955236.1
SIO_010081: BNIP2
subclass of: SO_0000673
so part of: BNIP2
location: complement(join(237389..239883,241798..241833,243224..243322,243455..243541,244160..244291,244409..244511,245156..245332,247139..247312,248083..248150,248853..248983,249483..249620,253836..253945))
location: region:237389-253945:-1
so has part: feature:253836-253945:-1:exon
so has part: feature:249483-249620:-1:exon
so has part: feature:248853-248983:-1:exon
so has part: feature:248083-248150:-1:exon
so has part: feature:247139-247312:-1:exon
so has part: feature:245156-245332:-1:exon
so has part: feature:244409-244511:-1:exon
so has part: feature:244160-244291:-1:exon
so has part: feature:243455-243541:-1:exon
so has part: feature:243224-243322:-1:exon
so has part: feature:241798-241833:-1:exon
so has part: feature:237389-239883:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:253836-253945:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:249483-249620:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:248853-248983:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:248083-248150:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:247139-247312:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:245156-245332:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:244409-244511:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:244160-244291:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:243455-243541:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:243224-243322:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:241798-241833:-1:exon

position:241798:-1
position: 241798
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:241833:-1
position: 241833
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:237389-239883:-1:exon

BNIP2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 87175
gene: BNIP2
product: BCL2 interacting protein 2, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 ESTs, 16 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_030955237.1
SIO_010081: BNIP2
subclass of: SO_0000673
so part of: BNIP2
location: complement(join(237389..239883,241798..241833,243224..243322,243455..243541,244160..244291,244409..244511,245156..245332,247139..247312,248083..248150,248853..248983,249483..249620,252173..252305,253836..253899))
location: region:237389-253899:-1
so has part: feature:253836-253899:-1:exon
so has part: feature:252173-252305:-1:exon
so has part: feature:249483-249620:-1:exon
so has part: feature:248853-248983:-1:exon
so has part: feature:248083-248150:-1:exon
so has part: feature:247139-247312:-1:exon
so has part: feature:245156-245332:-1:exon
so has part: feature:244409-244511:-1:exon
so has part: feature:244160-244291:-1:exon
so has part: feature:243455-243541:-1:exon
so has part: feature:243224-243322:-1:exon
so has part: feature:241798-241833:-1:exon
so has part: feature:237389-239883:-1:exon

position:253899:-1
position: 253899
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:253836-253899:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:252173-252305:-1:exon

position:252173:-1
position: 252173
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:252305:-1
position: 252305
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:249483-249620:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:248853-248983:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:248083-248150:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:247139-247312:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:245156-245332:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:244409-244511:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:244160-244291:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:243455-243541:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:243224-243322:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:241798-241833:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:237389-239883:-1:exon

BNIP2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 87175
gene: BNIP2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: BCL2/adenovirus E1B 19 kDa protein-interacting protein 2 isoform X2
translation: MEGVEFKEEWQDEDFPRPLPEDDPVESDALAAAGTENEADTEGNGTKLRKKLMAPDISLNLDPSEESVFSDDLDESGEIDLDDLDTPSENSNEFEWEDDLPKPKTTDVIRKGSLAEYTVAEEKDDGRRWRMFRIGEQDHRVDMKAIEPYKKVISHGGYYGDGLNAIVVFAVCFMPESSQPNYRYLMDNLFKYVIGTLELLVAENYMIVYLNGATTRRKMPSLGWLRKCYQQIDRRLRKNLKSLIIVHPSWFIRTLLAITKPFISSKFSQKIRYVFTLAELAELIPMEYVGIPECIKQVDQELNGKQEQKSEQ
SIO_010081: BNIP2
subclass of: SO_0000673
so part of: BNIP2
location: complement(join(239835..239883,243224..243322,243455..243541,244160..244291,244409..244511,245156..245332,247139..247312,248083..248150,248853..248902))
location: region:239835-248902:-1
so has part: feature:248853-248902:-1:exon
so has part: feature:248083-248150:-1:exon
so has part: feature:247139-247312:-1:exon
so has part: feature:245156-245332:-1:exon
so has part: feature:244409-244511:-1:exon
so has part: feature:244160-244291:-1:exon
so has part: feature:243455-243541:-1:exon
so has part: feature:243224-243322:-1:exon
so has part: feature:239835-239883:-1:exon

XP_030811098.1
type: Protein
SIO_000068: ncbiprotein

position:239835:-1
position: 239835
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:248902:-1
position: 248902
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:248853-248902:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:248083-248150:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:247139-247312:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:245156-245332:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:244409-244511:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:244160-244291:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:243455-243541:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:243224-243322:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:239835-239883:-1:exon

BNIP2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 87175
gene: BNIP2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: BCL2/adenovirus E1B 19 kDa protein-interacting protein 2 isoform X1
translation: MEGVEFKEEWQDEDFPRPLPEDDPVESDALAAAGTENEADTEGNGTKLRKKLMAPDISLNLDPSEESVFSDDLDESGEIDLDDLDTPSENSNEFEWEDDLPKPKTTDVIRKGSLAEYTVAEEKDDGRRWRMFRIGEQDHRVDMKAIEPYKKVISHGGYYGDGLNAIVVFAVCFMPESSQPNYRYLMDNLFKYVIGTLELLVAENYMIVYLNGATTRRKMPSLGWLRKCYQQIDRRLRKNLKSLIIVHPSWFIRTLLAITKPFISSKFSQKIRYVFTLAELAELIPMEYVGIPECIKQYEEEKFRKKQKRVDQELNGKQEQKSEQ
SIO_010081: BNIP2
subclass of: SO_0000673
so part of: BNIP2
location: complement(join(239835..239883,241798..241833,243224..243322,243455..243541,244160..244291,244409..244511,245156..245332,247139..247312,248083..248150,248853..248902))
location: region:239835-248902:-1
so has part: feature:248853-248902:-1:exon
so has part: feature:248083-248150:-1:exon
so has part: feature:247139-247312:-1:exon
so has part: feature:245156-245332:-1:exon
so has part: feature:244409-244511:-1:exon
so has part: feature:244160-244291:-1:exon
so has part: feature:243455-243541:-1:exon
so has part: feature:243224-243322:-1:exon
so has part: feature:241798-241833:-1:exon
so has part: feature:239835-239883:-1:exon

XP_030811096.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:248853-248902:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:248083-248150:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:247139-247312:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:245156-245332:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:244409-244511:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:244160-244291:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:243455-243541:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:243224-243322:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:241798-241833:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:239835-239883:-1:exon

BNIP2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 87175
gene: BNIP2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: BCL2/adenovirus E1B 19 kDa protein-interacting protein 2 isoform X1
translation: MEGVEFKEEWQDEDFPRPLPEDDPVESDALAAAGTENEADTEGNGTKLRKKLMAPDISLNLDPSEESVFSDDLDESGEIDLDDLDTPSENSNEFEWEDDLPKPKTTDVIRKGSLAEYTVAEEKDDGRRWRMFRIGEQDHRVDMKAIEPYKKVISHGGYYGDGLNAIVVFAVCFMPESSQPNYRYLMDNLFKYVIGTLELLVAENYMIVYLNGATTRRKMPSLGWLRKCYQQIDRRLRKNLKSLIIVHPSWFIRTLLAITKPFISSKFSQKIRYVFTLAELAELIPMEYVGIPECIKQYEEEKFRKKQKRVDQELNGKQEQKSEQ
SIO_010081: BNIP2
subclass of: SO_0000673
so part of: BNIP2
location: complement(join(239835..239883,241798..241833,243224..243322,243455..243541,244160..244291,244409..244511,245156..245332,247139..247312,248083..248150,248853..248902))
location: region:239835-248902:-1
so has part: feature:248853-248902:-1:exon
so has part: feature:248083-248150:-1:exon
so has part: feature:247139-247312:-1:exon
so has part: feature:245156-245332:-1:exon
so has part: feature:244409-244511:-1:exon
so has part: feature:244160-244291:-1:exon
so has part: feature:243455-243541:-1:exon
so has part: feature:243224-243322:-1:exon
so has part: feature:241798-241833:-1:exon
so has part: feature:239835-239883:-1:exon

XP_030811097.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:248853-248902:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:248083-248150:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:247139-247312:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:245156-245332:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:244409-244511:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:244160-244291:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:243455-243541:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:243224-243322:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:241798-241833:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:239835-239883:-1:exon

FOXB1
type: Gene
subclass of: SO_0000704
RO_0002162: 87175
gene: FOXB1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 366009..367822
location: region:366009-367822:1
so has part: feature:366009-367822:1:exon
subclass of: SO_0000010

115907477
type: Gene
SIO_000068: ncbigene

position:366009:1
position: 366009
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:367822:1
position: 367822
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:366009-367822:1:exon

FOXB1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 87175
gene: FOXB1
product: forkhead box B1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 15 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_030955415.1
SIO_010081: FOXB1
subclass of: SO_0000673
so part of: FOXB1
location: join(366009..366194,366623..367822)
location: region:366009-367822:1
so has part: feature:366009-366194:1:exon
so has part: feature:366623-367822:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:366009-366194:1:exon

position:366194:1
position: 366194
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:366623-367822:1:exon

position:366623:1
position: 366623
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

FOXB1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 87175
gene: FOXB1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: forkhead box protein B1
translation: MPRPGRNTYSDQKPPYSYISLTAMAIQSSPEKMLPLSEIYKFIMDRFPYYRENTQRWQNSLRHNLSFNDCFIKIPRRPDQPGKGSFWALHPSCGDMFENGSFLRRRKRFKVVKSDHLAPSKPADAAQYLQQQAKLRLSALAATGTHLPQMSTYNLGVSQPSSFKHPFAIENIIAREYKMPGGLAFSTMQPMPAAYPLPNQLTTVGSSIGTGWPHMYSSGMIDTATPISMASSEYGAYGVPIKPLCHGGQTLPAIPVPIKPTPAAVPALPALPAPIPTILSNSPPSLSPTSSQTATSQSSPATPSETLTSPAPALHSVAVH
SIO_010081: FOXB1
subclass of: SO_0000673
so part of: FOXB1
location: 366647..367609
location: region:366647-367609:1
so has part: feature:366647-367609:1:exon

XP_030811275.1
type: Protein
SIO_000068: ncbiprotein

position:366647:1
position: 366647
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:367609:1
position: 367609
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:366647-367609:1:exon

ANXA2
type: Gene
subclass of: SO_0000704
RO_0002162: 87175
gene: ANXA2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(505339..529831)
location: region:505339-529831:-1
so has part: feature:505339-529831:-1:exon
subclass of: SO_0000010

115907484
type: Gene
SIO_000068: ncbigene

position:505339:-1
position: 505339
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:529831:-1
position: 529831
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:505339-529831:-1:exon

ANXA2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 87175
gene: ANXA2
product: annexin A2, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 20 mRNAs, 31 ESTs, 15 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
transcript id: XM_030955423.1
SIO_010081: ANXA2
subclass of: SO_0000673
so part of: ANXA2
location: complement(join(505339..505708,506600..506722,507362..507420,508385..508480,509200..509293,509905..509964,510291..510370,510832..510922,512828..512941,515705..515799,521383..521482,525034..525093,529725..529831))
location: region:505339-529831:-1
so has part: feature:529725-529831:-1:exon
so has part: feature:525034-525093:-1:exon
so has part: feature:521383-521482:-1:exon
so has part: feature:515705-515799:-1:exon
so has part: feature:512828-512941:-1:exon
so has part: feature:510832-510922:-1:exon
so has part: feature:510291-510370:-1:exon
so has part: feature:509905-509964:-1:exon
so has part: feature:509200-509293:-1:exon
so has part: feature:508385-508480:-1:exon
so has part: feature:507362-507420:-1:exon
so has part: feature:506600-506722:-1:exon
so has part: feature:505339-505708:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:529725-529831:-1:exon

position:529725:-1
position: 529725
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:525034-525093:-1:exon

position:525034:-1
position: 525034
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:525093:-1
position: 525093
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:521383-521482:-1:exon

position:521383:-1
position: 521383
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:521482:-1
position: 521482
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:515705-515799:-1:exon

position:515705:-1
position: 515705
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:515799:-1
position: 515799
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:512828-512941:-1:exon

position:512828:-1
position: 512828
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:512941:-1
position: 512941
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:510832-510922:-1:exon

position:510832:-1
position: 510832
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:510922:-1
position: 510922
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:510291-510370:-1:exon

position:510291:-1
position: 510291
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:510370:-1
position: 510370
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:509905-509964:-1:exon

position:509905:-1
position: 509905
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:509964:-1
position: 509964
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:509200-509293:-1:exon

position:509200:-1
position: 509200
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:509293:-1
position: 509293
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:508385-508480:-1:exon

position:508385:-1
position: 508385
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:508480:-1
position: 508480
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:507362-507420:-1:exon

position:507362:-1
position: 507362
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:507420:-1
position: 507420
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:506600-506722:-1:exon

position:506600:-1
position: 506600
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:506722:-1
position: 506722
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:505339-505708:-1:exon

position:505708:-1
position: 505708
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

ANXA2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 87175
gene: ANXA2
product: annexin A2, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 18 mRNAs, 30 ESTs, 16 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
transcript id: XM_030955425.1
SIO_010081: ANXA2
subclass of: SO_0000673
so part of: ANXA2
location: complement(join(505339..505708,506600..506722,507362..507420,508385..508480,509200..509293,509905..509964,510291..510370,510832..510922,512828..512941,515705..515799,521383..521482,525034..525093,529336..529612))
location: region:505339-529612:-1
so has part: feature:529336-529612:-1:exon
so has part: feature:525034-525093:-1:exon
so has part: feature:521383-521482:-1:exon
so has part: feature:515705-515799:-1:exon
so has part: feature:512828-512941:-1:exon
so has part: feature:510832-510922:-1:exon
so has part: feature:510291-510370:-1:exon
so has part: feature:509905-509964:-1:exon
so has part: feature:509200-509293:-1:exon
so has part: feature:508385-508480:-1:exon
so has part: feature:507362-507420:-1:exon
so has part: feature:506600-506722:-1:exon
so has part: feature:505339-505708:-1:exon

position:529612:-1
position: 529612
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:529336-529612:-1:exon

position:529336:-1
position: 529336
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:525034-525093:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:521383-521482:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:515705-515799:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:512828-512941:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:510832-510922:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:510291-510370:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:509905-509964:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:509200-509293:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:508385-508480:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:507362-507420:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:506600-506722:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:505339-505708:-1:exon

ANXA2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 87175
gene: ANXA2
product: annexin A2, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 18 mRNAs, 30 ESTs, 16 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XM_030955424.1
SIO_010081: ANXA2
subclass of: SO_0000673
so part of: ANXA2
location: complement(join(505339..505708,506600..506722,507362..507420,508385..508480,509200..509293,509905..509964,510291..510370,510832..510922,512828..512941,515705..515799,521383..521482,525034..525093,528898..528965))
location: region:505339-528965:-1
so has part: feature:528898-528965:-1:exon
so has part: feature:525034-525093:-1:exon
so has part: feature:521383-521482:-1:exon
so has part: feature:515705-515799:-1:exon
so has part: feature:512828-512941:-1:exon
so has part: feature:510832-510922:-1:exon
so has part: feature:510291-510370:-1:exon
so has part: feature:509905-509964:-1:exon
so has part: feature:509200-509293:-1:exon
so has part: feature:508385-508480:-1:exon
so has part: feature:507362-507420:-1:exon
so has part: feature:506600-506722:-1:exon
so has part: feature:505339-505708:-1:exon

position:528965:-1
position: 528965
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:528898-528965:-1:exon

position:528898:-1
position: 528898
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:525034-525093:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:521383-521482:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:515705-515799:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:512828-512941:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:510832-510922:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:510291-510370:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:509905-509964:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:509200-509293:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:508385-508480:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:507362-507420:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:506600-506722:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:505339-505708:-1:exon

ANXA2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 87175
gene: ANXA2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: annexin A2
translation: MSTVHEILSKLSLEGDHSLPPSAYATVKAYSNFDADRDAAALETAIKTKGVDEVTIINILTNRSNEQRQDIAFAYQRRTKKELSAALKSALSGHLEAVILGLLKTPAQYDASELKAAMKGLGTDEDTLIEIICSRTNQELSEINRVYREMYKTELEKDIISDTSGDFRKLMVALAKGKRCEDTSVIDYELIDQDARDLYDAGVKRKGTDVPKWINIMTERSVPHLQKVFERYKSYSPYDMLESIKKEVKGDLENAFLNLVQCIQNKQLYFADRLYDSMKGKGTRDKVLIRIMVSRCEVDMLKIKSEFKRKYGKSLYYFIQQDTKGDYQRALLNLCGGED
SIO_010081: ANXA2
subclass of: SO_0000673
so part of: ANXA2
location: complement(join(505649..505708,506600..506722,507362..507420,508385..508480,509200..509293,509905..509964,510291..510370,510832..510922,512828..512941,515705..515799,521383..521482,525034..525081))
location: region:505649-525081:-1
so has part: feature:525034-525081:-1:exon
so has part: feature:521383-521482:-1:exon
so has part: feature:515705-515799:-1:exon
so has part: feature:512828-512941:-1:exon
so has part: feature:510832-510922:-1:exon
so has part: feature:510291-510370:-1:exon
so has part: feature:509905-509964:-1:exon
so has part: feature:509200-509293:-1:exon
so has part: feature:508385-508480:-1:exon
so has part: feature:507362-507420:-1:exon
so has part: feature:506600-506722:-1:exon
so has part: feature:505649-505708:-1:exon

XP_030811283.1
type: Protein
SIO_000068: ncbiprotein

position:505649:-1
position: 505649
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:525081:-1
position: 525081
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:525034-525081:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:521383-521482:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:515705-515799:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:512828-512941:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:510832-510922:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:510291-510370:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:509905-509964:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:509200-509293:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:508385-508480:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:507362-507420:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:506600-506722:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:505649-505708:-1:exon

ANXA2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 87175
gene: ANXA2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: annexin A2
translation: MSTVHEILSKLSLEGDHSLPPSAYATVKAYSNFDADRDAAALETAIKTKGVDEVTIINILTNRSNEQRQDIAFAYQRRTKKELSAALKSALSGHLEAVILGLLKTPAQYDASELKAAMKGLGTDEDTLIEIICSRTNQELSEINRVYREMYKTELEKDIISDTSGDFRKLMVALAKGKRCEDTSVIDYELIDQDARDLYDAGVKRKGTDVPKWINIMTERSVPHLQKVFERYKSYSPYDMLESIKKEVKGDLENAFLNLVQCIQNKQLYFADRLYDSMKGKGTRDKVLIRIMVSRCEVDMLKIKSEFKRKYGKSLYYFIQQDTKGDYQRALLNLCGGED
SIO_010081: ANXA2
subclass of: SO_0000673
so part of: ANXA2
location: complement(join(505649..505708,506600..506722,507362..507420,508385..508480,509200..509293,509905..509964,510291..510370,510832..510922,512828..512941,515705..515799,521383..521482,525034..525081))
location: region:505649-525081:-1
so has part: feature:525034-525081:-1:exon
so has part: feature:521383-521482:-1:exon
so has part: feature:515705-515799:-1:exon
so has part: feature:512828-512941:-1:exon
so has part: feature:510832-510922:-1:exon
so has part: feature:510291-510370:-1:exon
so has part: feature:509905-509964:-1:exon
so has part: feature:509200-509293:-1:exon
so has part: feature:508385-508480:-1:exon
so has part: feature:507362-507420:-1:exon
so has part: feature:506600-506722:-1:exon
so has part: feature:505649-505708:-1:exon

XP_030811284.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:525034-525081:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:521383-521482:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:515705-515799:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:512828-512941:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:510832-510922:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:510291-510370:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:509905-509964:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:509200-509293:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:508385-508480:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:507362-507420:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:506600-506722:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:505649-505708:-1:exon

ANXA2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 87175
gene: ANXA2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: annexin A2
translation: MSTVHEILSKLSLEGDHSLPPSAYATVKAYSNFDADRDAAALETAIKTKGVDEVTIINILTNRSNEQRQDIAFAYQRRTKKELSAALKSALSGHLEAVILGLLKTPAQYDASELKAAMKGLGTDEDTLIEIICSRTNQELSEINRVYREMYKTELEKDIISDTSGDFRKLMVALAKGKRCEDTSVIDYELIDQDARDLYDAGVKRKGTDVPKWINIMTERSVPHLQKVFERYKSYSPYDMLESIKKEVKGDLENAFLNLVQCIQNKQLYFADRLYDSMKGKGTRDKVLIRIMVSRCEVDMLKIKSEFKRKYGKSLYYFIQQDTKGDYQRALLNLCGGED
SIO_010081: ANXA2
subclass of: SO_0000673
so part of: ANXA2
location: complement(join(505649..505708,506600..506722,507362..507420,508385..508480,509200..509293,509905..509964,510291..510370,510832..510922,512828..512941,515705..515799,521383..521482,525034..525081))
location: region:505649-525081:-1
so has part: feature:525034-525081:-1:exon
so has part: feature:521383-521482:-1:exon
so has part: feature:515705-515799:-1:exon
so has part: feature:512828-512941:-1:exon
so has part: feature:510832-510922:-1:exon
so has part: feature:510291-510370:-1:exon
so has part: feature:509905-509964:-1:exon
so has part: feature:509200-509293:-1:exon
so has part: feature:508385-508480:-1:exon
so has part: feature:507362-507420:-1:exon
so has part: feature:506600-506722:-1:exon
so has part: feature:505649-505708:-1:exon

XP_030811285.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:525034-525081:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:521383-521482:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:515705-515799:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:512828-512941:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:510832-510922:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:510291-510370:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:509905-509964:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:509200-509293:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:508385-508480:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:507362-507420:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:506600-506722:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:505649-505708:-1:exon

ICE2
type: Gene
subclass of: SO_0000704
RO_0002162: 87175
gene: ICE2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(542520..566027)
location: region:542520-566027:-1
so has part: feature:542520-566027:-1:exon
subclass of: SO_0000010

115907574
type: Gene
SIO_000068: ncbigene

position:542520:-1
position: 542520
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:566027:-1
position: 566027
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:542520-566027:-1:exon

ICE2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 87175
gene: ICE2
product: interactor of little elongation complex ELL subunit 2, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, 8 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XM_030955535.1
SIO_010081: ICE2
subclass of: SO_0000673
so part of: ICE2
location: complement(join(542520..544030,544715..544970,546014..546064,546155..546239,551079..551208,552647..552825,554797..555754,556219..556403,557883..558042,559110..559226,559577..559711,560997..561116,562163..562430,564911..565015,565902..566027))
location: region:542520-566027:-1
so has part: feature:565902-566027:-1:exon
so has part: feature:564911-565015:-1:exon
so has part: feature:562163-562430:-1:exon
so has part: feature:560997-561116:-1:exon
so has part: feature:559577-559711:-1:exon
so has part: feature:559110-559226:-1:exon
so has part: feature:557883-558042:-1:exon
so has part: feature:556219-556403:-1:exon
so has part: feature:554797-555754:-1:exon
so has part: feature:552647-552825:-1:exon
so has part: feature:551079-551208:-1:exon
so has part: feature:546155-546239:-1:exon
so has part: feature:546014-546064:-1:exon
so has part: feature:544715-544970:-1:exon
so has part: feature:542520-544030:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:565902-566027:-1:exon

position:565902:-1
position: 565902
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:564911-565015:-1:exon

position:564911:-1
position: 564911
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:565015:-1
position: 565015
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:562163-562430:-1:exon

position:562163:-1
position: 562163
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:562430:-1
position: 562430
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:560997-561116:-1:exon

position:560997:-1
position: 560997
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:561116:-1
position: 561116
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:559577-559711:-1:exon

position:559577:-1
position: 559577
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:559711:-1
position: 559711
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:559110-559226:-1:exon

position:559110:-1
position: 559110
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:559226:-1
position: 559226
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:557883-558042:-1:exon

position:557883:-1
position: 557883
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:558042:-1
position: 558042
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:556219-556403:-1:exon

position:556219:-1
position: 556219
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:556403:-1
position: 556403
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:554797-555754:-1:exon

position:554797:-1
position: 554797
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:555754:-1
position: 555754
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:552647-552825:-1:exon

position:552647:-1
position: 552647
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:552825:-1
position: 552825
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:551079-551208:-1:exon

position:551079:-1
position: 551079
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:551208:-1
position: 551208
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:546155-546239:-1:exon

position:546155:-1
position: 546155
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:546239:-1
position: 546239
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:546014-546064:-1:exon

position:546014:-1
position: 546014
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:546064:-1
position: 546064
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:544715-544970:-1:exon

position:544715:-1
position: 544715
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:544970:-1
position: 544970
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:542520-544030:-1:exon

position:544030:-1
position: 544030
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

ICE2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 87175
gene: ICE2
product: interactor of little elongation complex ELL subunit 2, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_030955538.1
SIO_010081: ICE2
subclass of: SO_0000673
so part of: ICE2
location: complement(join(542520..544030,544715..544970,546014..546064,546155..546239,551079..551208,552647..552825,554797..555754,556219..556403,557883..558042,559110..559226,559577..559711,560997..561116,562163..562430,565902..565946))
location: region:542520-565946:-1
so has part: feature:565902-565946:-1:exon
so has part: feature:562163-562430:-1:exon
so has part: feature:560997-561116:-1:exon
so has part: feature:559577-559711:-1:exon
so has part: feature:559110-559226:-1:exon
so has part: feature:557883-558042:-1:exon
so has part: feature:556219-556403:-1:exon
so has part: feature:554797-555754:-1:exon
so has part: feature:552647-552825:-1:exon
so has part: feature:551079-551208:-1:exon
so has part: feature:546155-546239:-1:exon
so has part: feature:546014-546064:-1:exon
so has part: feature:544715-544970:-1:exon
so has part: feature:542520-544030:-1:exon

position:565946:-1
position: 565946
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:565902-565946:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:562163-562430:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:560997-561116:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:559577-559711:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:559110-559226:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:557883-558042:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:556219-556403:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:554797-555754:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:552647-552825:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:551079-551208:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:546155-546239:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:546014-546064:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:544715-544970:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:542520-544030:-1:exon

ICE2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 87175
gene: ICE2
product: interactor of little elongation complex ELL subunit 2, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_030955537.1
SIO_010081: ICE2
subclass of: SO_0000673
so part of: ICE2
location: complement(join(542520..544030,544715..544970,546014..546064,546155..546239,551079..551208,552647..552825,554797..555754,556219..556403,557883..558042,559110..559226,559577..559711,560997..561116,562163..562430,564911..565015,565553..565735))
location: region:542520-565735:-1
so has part: feature:565553-565735:-1:exon
so has part: feature:564911-565015:-1:exon
so has part: feature:562163-562430:-1:exon
so has part: feature:560997-561116:-1:exon
so has part: feature:559577-559711:-1:exon
so has part: feature:559110-559226:-1:exon
so has part: feature:557883-558042:-1:exon
so has part: feature:556219-556403:-1:exon
so has part: feature:554797-555754:-1:exon
so has part: feature:552647-552825:-1:exon
so has part: feature:551079-551208:-1:exon
so has part: feature:546155-546239:-1:exon
so has part: feature:546014-546064:-1:exon
so has part: feature:544715-544970:-1:exon
so has part: feature:542520-544030:-1:exon

position:565735:-1
position: 565735
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:565553-565735:-1:exon

position:565553:-1
position: 565553
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:564911-565015:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:562163-562430:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:560997-561116:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:559577-559711:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:559110-559226:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:557883-558042:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:556219-556403:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:554797-555754:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:552647-552825:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:551079-551208:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:546155-546239:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:546014-546064:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:544715-544970:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:542520-544030:-1:exon

ICE2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 87175
gene: ICE2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: little elongation complex subunit 2 isoform X1
translation: MAAAGPPLTWDIPPKNGREVFFSHELYEKHSLSLSLSELWHLSNREAKKNAEALANSSENRQACGMQAAESLEGKDKGPADDHPLPEPRLPYPFTSCLTEKEQKTYLYLMTKFSGKRNHFQVNEASQREFFTYMQMKEVVSNEISEFMKFAQNAAKSCAQDYDAISEDALCYTEELLRACIGHVQKYPEVYTLQEIMSIMGGKFHTQLTFRLEKNLLAMGTARRGKTDFPSMPVQLPTDYSTVTSIITPEKKAHVMHNDISSDSNAEKLALKYCPQVVLSSQSLFTLLNNHGLNYKEQWEIPVCVKMITVAGSKPAKVVYVDPPLLRKEMTVRERNQIFHEIPMDFLATKTSYVPISDVSMDKPAEDNLLQWDVCPDTYQCRTIPPPDDTGMDFDDDLTELETFGATTKLSRTCKMETTFPTASNTAKILSHGLKMAGKNSSAINRGDEEEKNTLSEQEHSACASVQLPSLDGIPGCSPQEHSPCKSFQSVEVGLSKAQQDVMTKEVLDRETKLNPLPVAVSSEKEPDGAQKKETYTSLCSSDTDEERLVIDAECETAAPCKPAVPPAGSSTSAETARSPCPAQSPSASITDCSHTTDQGKKASKKPPRKLSKESDPVGQILKMQTELLKSPSPKAPEPVVSCDNSNAVPAQLPESPKPLMTSSTESVPAPASNATSSSRNTWTWLFEGVPKTKLPSELQLLEEDSSEYQAPEEGNVVYKLFSLNDLLLLVRCSVQKVNSLTQYQKKKKAQKPSPIFLLPKLEYQAYYGVEALTESEVCQLWTQSMLHSKCLFYVGHIDAFTSKLIMLEKISSAALREKLGLIKPANSLNILHHVLKKVSDLEEGSYLLTHAAGDSSVAIYKSSLDKSTRSSYNLHKAHCDLPAVPATLSVPWVPLDPSLPLPYHIIHGRVPCTFPPAPWEGWKQKMAGVKRQLDTPHEGRPGAMGAQGKPAKPARDEGVAPKKLRQNFCKQRKVKKKWKTKFNKMQLK
SIO_010081: ICE2
subclass of: SO_0000673
so part of: ICE2
location: complement(join(543839..544030,544715..544970,546014..546064,546155..546239,551079..551208,552647..552825,554797..555754,556219..556403,557883..558042,559110..559226,559577..559711,560997..561116,562163..562430,564911..565015,565902..565930))
location: region:543839-565930:-1
so has part: feature:565902-565930:-1:exon
so has part: feature:564911-565015:-1:exon
so has part: feature:562163-562430:-1:exon
so has part: feature:560997-561116:-1:exon
so has part: feature:559577-559711:-1:exon
so has part: feature:559110-559226:-1:exon
so has part: feature:557883-558042:-1:exon
so has part: feature:556219-556403:-1:exon
so has part: feature:554797-555754:-1:exon
so has part: feature:552647-552825:-1:exon
so has part: feature:551079-551208:-1:exon
so has part: feature:546155-546239:-1:exon
so has part: feature:546014-546064:-1:exon
so has part: feature:544715-544970:-1:exon
so has part: feature:543839-544030:-1:exon

XP_030811395.1
type: Protein
SIO_000068: ncbiprotein

position:543839:-1
position: 543839
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:565930:-1
position: 565930
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:565902-565930:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:564911-565015:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:562163-562430:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:560997-561116:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:559577-559711:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:559110-559226:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:557883-558042:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:556219-556403:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:554797-555754:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:552647-552825:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:551079-551208:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:546155-546239:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:546014-546064:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:544715-544970:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:543839-544030:-1:exon

ICE2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 87175
gene: ICE2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: little elongation complex subunit 2 isoform X2
translation: MQAAESLEGKDKGPADDHPLPEPRLPYPFTSCLTEKEQKTYLYLMTKFSGKRNHFQVNEASQREFFTYMQMKEVVSNEISEFMKFAQNAAKSCAQDYDAISEDALCYTEELLRACIGHVQKYPEVYTLQEIMSIMGGKFHTQLTFRLEKNLLAMGTARRGKTDFPSMPVQLPTDYSTVTSIITPEKKAHVMHNDISSDSNAEKLALKYCPQVVLSSQSLFTLLNNHGLNYKEQWEIPVCVKMITVAGSKPAKVVYVDPPLLRKEMTVRERNQIFHEIPMDFLATKTSYVPISDVSMDKPAEDNLLQWDVCPDTYQCRTIPPPDDTGMDFDDDLTELETFGATTKLSRTCKMETTFPTASNTAKILSHGLKMAGKNSSAINRGDEEEKNTLSEQEHSACASVQLPSLDGIPGCSPQEHSPCKSFQSVEVGLSKAQQDVMTKEVLDRETKLNPLPVAVSSEKEPDGAQKKETYTSLCSSDTDEERLVIDAECETAAPCKPAVPPAGSSTSAETARSPCPAQSPSASITDCSHTTDQGKKASKKPPRKLSKESDPVGQILKMQTELLKSPSPKAPEPVVSCDNSNAVPAQLPESPKPLMTSSTESVPAPASNATSSSRNTWTWLFEGVPKTKLPSELQLLEEDSSEYQAPEEGNVVYKLFSLNDLLLLVRCSVQKVNSLTQYQKKKKAQKPSPIFLLPKLEYQAYYGVEALTESEVCQLWTQSMLHSKCLFYVGHIDAFTSKLIMLEKISSAALREKLGLIKPANSLNILHHVLKKVSDLEEGSYLLTHAAGDSSVAIYKSSLDKSTRSSYNLHKAHCDLPAVPATLSVPWVPLDPSLPLPYHIIHGRVPCTFPPAPWEGWKQKMAGVKRQLDTPHEGRPGAMGAQGKPAKPARDEGVAPKKLRQNFCKQRKVKKKWKTKFNKMQLK
SIO_010081: ICE2
subclass of: SO_0000673
so part of: ICE2
location: complement(join(543839..544030,544715..544970,546014..546064,546155..546239,551079..551208,552647..552825,554797..555754,556219..556403,557883..558042,559110..559226,559577..559711,560997..561116,562163..562369))
location: region:543839-562369:-1
so has part: feature:562163-562369:-1:exon
so has part: feature:560997-561116:-1:exon
so has part: feature:559577-559711:-1:exon
so has part: feature:559110-559226:-1:exon
so has part: feature:557883-558042:-1:exon
so has part: feature:556219-556403:-1:exon
so has part: feature:554797-555754:-1:exon
so has part: feature:552647-552825:-1:exon
so has part: feature:551079-551208:-1:exon
so has part: feature:546155-546239:-1:exon
so has part: feature:546014-546064:-1:exon
so has part: feature:544715-544970:-1:exon
so has part: feature:543839-544030:-1:exon

XP_030811397.1
type: Protein
SIO_000068: ncbiprotein

position:562369:-1
position: 562369
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:562163-562369:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:560997-561116:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:559577-559711:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:559110-559226:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:557883-558042:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:556219-556403:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:554797-555754:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:552647-552825:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:551079-551208:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:546155-546239:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:546014-546064:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:544715-544970:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:543839-544030:-1:exon

ICE2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 87175
gene: ICE2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: little elongation complex subunit 2 isoform X2
translation: MQAAESLEGKDKGPADDHPLPEPRLPYPFTSCLTEKEQKTYLYLMTKFSGKRNHFQVNEASQREFFTYMQMKEVVSNEISEFMKFAQNAAKSCAQDYDAISEDALCYTEELLRACIGHVQKYPEVYTLQEIMSIMGGKFHTQLTFRLEKNLLAMGTARRGKTDFPSMPVQLPTDYSTVTSIITPEKKAHVMHNDISSDSNAEKLALKYCPQVVLSSQSLFTLLNNHGLNYKEQWEIPVCVKMITVAGSKPAKVVYVDPPLLRKEMTVRERNQIFHEIPMDFLATKTSYVPISDVSMDKPAEDNLLQWDVCPDTYQCRTIPPPDDTGMDFDDDLTELETFGATTKLSRTCKMETTFPTASNTAKILSHGLKMAGKNSSAINRGDEEEKNTLSEQEHSACASVQLPSLDGIPGCSPQEHSPCKSFQSVEVGLSKAQQDVMTKEVLDRETKLNPLPVAVSSEKEPDGAQKKETYTSLCSSDTDEERLVIDAECETAAPCKPAVPPAGSSTSAETARSPCPAQSPSASITDCSHTTDQGKKASKKPPRKLSKESDPVGQILKMQTELLKSPSPKAPEPVVSCDNSNAVPAQLPESPKPLMTSSTESVPAPASNATSSSRNTWTWLFEGVPKTKLPSELQLLEEDSSEYQAPEEGNVVYKLFSLNDLLLLVRCSVQKVNSLTQYQKKKKAQKPSPIFLLPKLEYQAYYGVEALTESEVCQLWTQSMLHSKCLFYVGHIDAFTSKLIMLEKISSAALREKLGLIKPANSLNILHHVLKKVSDLEEGSYLLTHAAGDSSVAIYKSSLDKSTRSSYNLHKAHCDLPAVPATLSVPWVPLDPSLPLPYHIIHGRVPCTFPPAPWEGWKQKMAGVKRQLDTPHEGRPGAMGAQGKPAKPARDEGVAPKKLRQNFCKQRKVKKKWKTKFNKMQLK
SIO_010081: ICE2
subclass of: SO_0000673
so part of: ICE2
location: complement(join(543839..544030,544715..544970,546014..546064,546155..546239,551079..551208,552647..552825,554797..555754,556219..556403,557883..558042,559110..559226,559577..559711,560997..561116,562163..562369))
location: region:543839-562369:-1
so has part: feature:562163-562369:-1:exon
so has part: feature:560997-561116:-1:exon
so has part: feature:559577-559711:-1:exon
so has part: feature:559110-559226:-1:exon
so has part: feature:557883-558042:-1:exon
so has part: feature:556219-556403:-1:exon
so has part: feature:554797-555754:-1:exon
so has part: feature:552647-552825:-1:exon
so has part: feature:551079-551208:-1:exon
so has part: feature:546155-546239:-1:exon
so has part: feature:546014-546064:-1:exon
so has part: feature:544715-544970:-1:exon
so has part: feature:543839-544030:-1:exon

XP_030811398.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:562163-562369:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:560997-561116:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:559577-559711:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:559110-559226:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:557883-558042:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:556219-556403:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:554797-555754:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:552647-552825:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:551079-551208:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:546155-546239:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:546014-546064:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:544715-544970:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:543839-544030:-1:exon

ICE2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 87175
gene: ICE2
product: interactor of little elongation complex ELL subunit 2, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_030955539.1
SIO_010081: ICE2
subclass of: SO_0000673
so part of: ICE2
location: complement(join(549611..549886,551079..551208,552647..552825,554797..555754,556219..556403,557883..558042,559110..559226,559577..559711,560997..561116,562163..562430,564911..565015,565902..566027))
location: region:549611-566027:-1
so has part: feature:565902-566027:-1:exon
so has part: feature:564911-565015:-1:exon
so has part: feature:562163-562430:-1:exon
so has part: feature:560997-561116:-1:exon
so has part: feature:559577-559711:-1:exon
so has part: feature:559110-559226:-1:exon
so has part: feature:557883-558042:-1:exon
so has part: feature:556219-556403:-1:exon
so has part: feature:554797-555754:-1:exon
so has part: feature:552647-552825:-1:exon
so has part: feature:551079-551208:-1:exon
so has part: feature:549611-549886:-1:exon

position:549611:-1
position: 549611
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:565902-566027:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:564911-565015:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:562163-562430:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:560997-561116:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:559577-559711:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:559110-559226:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:557883-558042:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:556219-556403:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:554797-555754:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:552647-552825:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:551079-551208:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:549611-549886:-1:exon

position:549886:-1
position: 549886
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

ICE2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 87175
gene: ICE2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: little elongation complex subunit 2 isoform X3
translation: MAAAGPPLTWDIPPKNGREVFFSHELYEKHSLSLSLSELWHLSNREAKKNAEALANSSENRQACGMQAAESLEGKDKGPADDHPLPEPRLPYPFTSCLTEKEQKTYLYLMTKFSGKRNHFQVNEASQREFFTYMQMKEVVSNEISEFMKFAQNAAKSCAQDYDAISEDALCYTEELLRACIGHVQKYPEVYTLQEIMSIMGGKFHTQLTFRLEKNLLAMGTARRGKTDFPSMPVQLPTDYSTVTSIITPEKKAHVMHNDISSDSNAEKLALKYCPQVVLSSQSLFTLLNNHGLNYKEQWEIPVCVKMITVAGSKPAKVVYVDPPLLRKEMTVRERNQIFHEIPMDFLATKTSYVPISDVSMDKPAEDNLLQWDVCPDTYQCRTIPPPDDTGMDFDDDLTELETFGATTKLSRTCKMETTFPTASNTAKILSHGLKMAGKNSSAINRGDEEEKNTLSEQEHSACASVQLPSLDGIPGCSPQEHSPCKSFQSVEVGLSKAQQDVMTKEVLDRETKLNPLPVAVSSEKEPDGAQKKETYTSLCSSDTDEERLVIDAECETAAPCKPAVPPAGSSTSAETARSPCPAQSPSASITDCSHTTDQGKKASKKPPRKLSKESDPVGQILKMQTELLKSPSPKAPEPVVSCDNSNAVPAQLPESPKPLMTSSTESVPAPASNATSSSRNTWTWLFEGVPKTKLPSELQLLEEDSSEYQAPEEGNVVYKLFSLNDLLLLVRCSVQKVNSLTQYQKKKKAQKPSPIFLLPKLEYQAYYGVEALTESEVCQLWTQSMLHSKCLFYVGN
SIO_010081: ICE2
subclass of: SO_0000673
so part of: ICE2
location: complement(join(549879..549886,551079..551208,552647..552825,554797..555754,556219..556403,557883..558042,559110..559226,559577..559711,560997..561116,562163..562430,564911..565015,565902..565930))
location: region:549879-565930:-1
so has part: feature:565902-565930:-1:exon
so has part: feature:564911-565015:-1:exon
so has part: feature:562163-562430:-1:exon
so has part: feature:560997-561116:-1:exon
so has part: feature:559577-559711:-1:exon
so has part: feature:559110-559226:-1:exon
so has part: feature:557883-558042:-1:exon
so has part: feature:556219-556403:-1:exon
so has part: feature:554797-555754:-1:exon
so has part: feature:552647-552825:-1:exon
so has part: feature:551079-551208:-1:exon
so has part: feature:549879-549886:-1:exon

XP_030811399.1
type: Protein
SIO_000068: ncbiprotein

position:549879:-1
position: 549879
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:565902-565930:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:564911-565015:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:562163-562430:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:560997-561116:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:559577-559711:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:559110-559226:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:557883-558042:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:556219-556403:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:554797-555754:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:552647-552825:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:551079-551208:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:549879-549886:-1:exon

RORA
type: Gene
subclass of: SO_0000704
RO_0002162: 87175
gene: RORA
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(568213..640196)
location: region:568213-640196:-1
so has part: feature:568213-640196:-1:exon
subclass of: SO_0000010

115907292
type: Gene
SIO_000068: ncbigene

position:568213:-1
position: 568213
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:640196:-1
position: 640196
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:568213-640196:-1:exon

RORA
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 87175
gene: RORA
product: RAR related orphan receptor A, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 30 ESTs, 10 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_030955092.1
SIO_010081: RORA
subclass of: SO_0000673
so part of: RORA
location: complement(join(568213..578426,579694..579806,581064..581174,582541..582648,583315..583447,584640..584761,588500..588706,590425..590566,598494..598579,640055..640196))
location: region:568213-640196:-1
so has part: feature:640055-640196:-1:exon
so has part: feature:598494-598579:-1:exon
so has part: feature:590425-590566:-1:exon
so has part: feature:588500-588706:-1:exon
so has part: feature:584640-584761:-1:exon
so has part: feature:583315-583447:-1:exon
so has part: feature:582541-582648:-1:exon
so has part: feature:581064-581174:-1:exon
so has part: feature:579694-579806:-1:exon
so has part: feature:568213-578426:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:640055-640196:-1:exon

position:640055:-1
position: 640055
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:598494-598579:-1:exon

position:598494:-1
position: 598494
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:598579:-1
position: 598579
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:590425-590566:-1:exon

position:590425:-1
position: 590425
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:590566:-1
position: 590566
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:588500-588706:-1:exon

position:588500:-1
position: 588500
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:588706:-1
position: 588706
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:584640-584761:-1:exon

position:584640:-1
position: 584640
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:584761:-1
position: 584761
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:583315-583447:-1:exon

position:583315:-1
position: 583315
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:583447:-1
position: 583447
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:582541-582648:-1:exon

position:582541:-1
position: 582541
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:582648:-1
position: 582648
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:581064-581174:-1:exon

position:581064:-1
position: 581064
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:581174:-1
position: 581174
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:579694-579806:-1:exon

position:579694:-1
position: 579694
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:579806:-1
position: 579806
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:568213-578426:-1:exon

position:578426:-1
position: 578426
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

RORA
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 87175
gene: RORA
product: RAR related orphan receptor A, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 mRNAs, 33 ESTs, 35 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_030955091.1
SIO_010081: RORA
subclass of: SO_0000673
so part of: RORA
location: complement(join(568213..578426,579694..579806,581064..581174,582541..582648,583315..583447,584640..584761,588311..588706,590425..590566,598494..598579,640055..640196))
location: region:568213-640196:-1
so has part: feature:640055-640196:-1:exon
so has part: feature:598494-598579:-1:exon
so has part: feature:590425-590566:-1:exon
so has part: feature:588311-588706:-1:exon
so has part: feature:584640-584761:-1:exon
so has part: feature:583315-583447:-1:exon
so has part: feature:582541-582648:-1:exon
so has part: feature:581064-581174:-1:exon
so has part: feature:579694-579806:-1:exon
so has part: feature:568213-578426:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:640055-640196:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:598494-598579:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:590425-590566:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:588311-588706:-1:exon

position:588311:-1
position: 588311
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:584640-584761:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:583315-583447:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:582541-582648:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:581064-581174:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:579694-579806:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:568213-578426:-1:exon

RORA
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 87175
gene: RORA
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: nuclear receptor ROR-alpha isoform X2
translation: MMCVVLAAMKAQIEIIPCKICGDKSSGIHYGVITCEGCKGFFRRSQQSNATYSCPRQKNCLIDRTSRNRCQHCRLQKCLAVGMSRDAVKFGRMSKKQRDSLYAEVQKHRMQQQQRDHQQQPGEAEPLTPTYNITTNGLTELHDDLSNYIDGHTPEEHLAQNISKSHMETCQYLREELQQITWQTFLQEEIENYQNKQREVMWQLCAVKITEAIQYVVEFAKRIDGFMELCQNDQIVLLKAGSLEVVFIRMCRAFDSQNNTVYFDGKYASPEVFKSLGCEDFISFVFEFGKSLCSMHLTEDEIALFSAFVLMSADRSWLQEKVKIEKLQQKIQLALQHVLQKNHREDGILTKLICKVSTLRALCGRHTEKLMAFKAIYPDIVRLHFPPLYKELFTSEFEPAMQIDG
SIO_010081: RORA
subclass of: SO_0000673
so part of: RORA
location: complement(join(578262..578426,579694..579806,581064..581174,582541..582648,583315..583447,584640..584761,588500..588706,590425..590566,598494..598579,640055..640085))
location: region:578262-640085:-1
so has part: feature:640055-640085:-1:exon
so has part: feature:598494-598579:-1:exon
so has part: feature:590425-590566:-1:exon
so has part: feature:588500-588706:-1:exon
so has part: feature:584640-584761:-1:exon
so has part: feature:583315-583447:-1:exon
so has part: feature:582541-582648:-1:exon
so has part: feature:581064-581174:-1:exon
so has part: feature:579694-579806:-1:exon
so has part: feature:578262-578426:-1:exon

XP_030810952.1
type: Protein
SIO_000068: ncbiprotein

position:578262:-1
position: 578262
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:640085:-1
position: 640085
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:640055-640085:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:598494-598579:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:590425-590566:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:588500-588706:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:584640-584761:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:583315-583447:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:582541-582648:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:581064-581174:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:579694-579806:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:578262-578426:-1:exon

RORA
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 87175
gene: RORA
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: nuclear receptor ROR-alpha isoform X1
translation: MMCVVLAAMKAQIEIIPCKICGDKSSGIHYGVITCEGCKGFFRRSQQSNATYSCPRQKNCLIDRTSRNRCQHCRLQKCLAVGMSRDAVKFGRMSKKQRDSLYAEVQKHRMQQQQRDHQQQPGEAEPLTPTYNITTNGLTELHDDLSNYIDGHTPEGSKADSAVSSFYLDIQPSPDQSGLDINGIKPEPICDYTPASGFFPYCSFTNGETSPTVSMAELEHLAQNISKSHMETCQYLREELQQITWQTFLQEEIENYQNKQREVMWQLCAVKITEAIQYVVEFAKRIDGFMELCQNDQIVLLKAGSLEVVFIRMCRAFDSQNNTVYFDGKYASPEVFKSLGCEDFISFVFEFGKSLCSMHLTEDEIALFSAFVLMSADRSWLQEKVKIEKLQQKIQLALQHVLQKNHREDGILTKLICKVSTLRALCGRHTEKLMAFKAIYPDIVRLHFPPLYKELFTSEFEPAMQIDG
SIO_010081: RORA
subclass of: SO_0000673
so part of: RORA
location: complement(join(578262..578426,579694..579806,581064..581174,582541..582648,583315..583447,584640..584761,588311..588706,590425..590566,598494..598579,640055..640085))
location: region:578262-640085:-1
so has part: feature:640055-640085:-1:exon
so has part: feature:598494-598579:-1:exon
so has part: feature:590425-590566:-1:exon
so has part: feature:588311-588706:-1:exon
so has part: feature:584640-584761:-1:exon
so has part: feature:583315-583447:-1:exon
so has part: feature:582541-582648:-1:exon
so has part: feature:581064-581174:-1:exon
so has part: feature:579694-579806:-1:exon
so has part: feature:578262-578426:-1:exon

XP_030810951.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:640055-640085:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:598494-598579:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:590425-590566:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:588311-588706:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:584640-584761:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:583315-583447:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:582541-582648:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:581064-581174:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:579694-579806:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:578262-578426:-1:exon

VPS13C
type: Gene
subclass of: SO_0000704
RO_0002162: 87175
gene: VPS13C
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1091349..1167778)
location: region:1091349-1167778:-1
so has part: feature:1091349-1167778:-1:exon
subclass of: SO_0000010

115907246
type: Gene
SIO_000068: ncbigene

position:1091349:-1
position: 1091349
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1167778:-1
position: 1167778
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1091349-1167778:-1:exon

VPS13C
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 87175
gene: VPS13C
product: vacuolar protein sorting 13 homolog C, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 ESTs, 10 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_030954989.1
SIO_010081: VPS13C
subclass of: SO_0000673
so part of: VPS13C
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position: 1117352
reference: sequence
type: ReverseStrandPosition
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position:1117646:-1
position: 1117646
reference: sequence
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urn:…
SIO_000300: 59
SIO_000628: feature:1115584-1115973:-1:exon

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position: 1115584
reference: sequence
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position:1115973:-1
position: 1115973
reference: sequence
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urn:…
SIO_000300: 60
SIO_000628: feature:1114781-1114885:-1:exon

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position: 1114781
reference: sequence
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position:1114885:-1
position: 1114885
reference: sequence
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urn:…
SIO_000300: 61
SIO_000628: feature:1114081-1114245:-1:exon

position:1114081:-1
position: 1114081
reference: sequence
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position:1114245:-1
position: 1114245
reference: sequence
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urn:…
SIO_000300: 62
SIO_000628: feature:1113602-1113730:-1:exon

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position: 1113602
reference: sequence
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position:1113730:-1
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urn:…
SIO_000300: 63
SIO_000628: feature:1112898-1113031:-1:exon

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position: 1112898
reference: sequence
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position:1113031:-1
position: 1113031
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urn:…
SIO_000300: 64
SIO_000628: feature:1112563-1112689:-1:exon

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reference: sequence
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position:1112689:-1
position: 1112689
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urn:…
SIO_000300: 65
SIO_000628: feature:1111393-1111628:-1:exon

position:1111393:-1
position: 1111393
reference: sequence
type: ReverseStrandPosition
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position:1111628:-1
position: 1111628
reference: sequence
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urn:…
SIO_000300: 66
SIO_000628: feature:1110919-1111069:-1:exon

position:1110919:-1
position: 1110919
reference: sequence
type: ReverseStrandPosition
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position:1111069:-1
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reference: sequence
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urn:…
SIO_000300: 67
SIO_000628: feature:1109722-1109862:-1:exon

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reference: sequence
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position:1109862:-1
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urn:…
SIO_000300: 68
SIO_000628: feature:1108184-1108265:-1:exon

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position: 1108184
reference: sequence
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position:1108265:-1
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urn:…
SIO_000300: 69
SIO_000628: feature:1108024-1108093:-1:exon

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reference: sequence
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urn:…
SIO_000300: 70
SIO_000628: feature:1107479-1107590:-1:exon

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reference: sequence
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reference: sequence
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urn:…
SIO_000300: 71
SIO_000628: feature:1107044-1107157:-1:exon

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reference: sequence
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urn:…
SIO_000300: 72
SIO_000628: feature:1106474-1106610:-1:exon

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position: 1106474
reference: sequence
type: ReverseStrandPosition
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position:1106610:-1
position: 1106610
reference: sequence
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urn:…
SIO_000300: 73
SIO_000628: feature:1106108-1106189:-1:exon

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position: 1106108
reference: sequence
type: ReverseStrandPosition
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position:1106189:-1
position: 1106189
reference: sequence
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urn:…
SIO_000300: 74
SIO_000628: feature:1105782-1105895:-1:exon

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position: 1105782
reference: sequence
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urn:…
SIO_000300: 75
SIO_000628: feature:1105459-1105534:-1:exon

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reference: sequence
type: ReverseStrandPosition
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reference: sequence
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urn:…
SIO_000300: 76
SIO_000628: feature:1104740-1104903:-1:exon

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reference: sequence
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urn:…
SIO_000300: 77
SIO_000628: feature:1103873-1103918:-1:exon

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reference: sequence
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urn:…
SIO_000300: 78
SIO_000628: feature:1102729-1102852:-1:exon

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reference: sequence
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position:1102852:-1
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urn:…
SIO_000300: 79
SIO_000628: feature:1101953-1102067:-1:exon

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urn:…
SIO_000300: 80
SIO_000628: feature:1096205-1096296:-1:exon

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reference: sequence
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position:1096296:-1
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reference: sequence
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urn:…
SIO_000300: 81
SIO_000628: feature:1095131-1095254:-1:exon

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reference: sequence
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urn:…
SIO_000300: 82
SIO_000628: feature:1094784-1094870:-1:exon

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position: 1094784
reference: sequence
type: ReverseStrandPosition
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position:1094870:-1
position: 1094870
reference: sequence
type: ReverseStrandPosition
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urn:…
SIO_000300: 83
SIO_000628: feature:1091349-1093441:-1:exon

position:1093441:-1
position: 1093441
reference: sequence
type: ReverseStrandPosition
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VPS13C
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 87175
gene: VPS13C
product: vacuolar protein sorting 13 homolog C, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 ESTs, 1 Protein, and 99% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_030954988.1
SIO_010081: VPS13C
subclass of: SO_0000673
so part of: VPS13C
location: complement(join(1091349..1093441,1094784..1094870,1095131..1095254,1096205..1096296,1101953..1102067,1102729..1102852,1103873..1103918,1104740..1104903,1105459..1105534,1105782..1105895,1106108..1106189,1106474..1106610,1107044..1107157,1107479..1107590,1108024..1108093,1108184..1108265,1109722..1109862,1110919..1111069,1111393..1111628,1112563..1112689,1112898..1113031,1113602..1113730,1114081..1114245,1114781..1114885,1115584..1115973,1117352..1117646,1117872..1117993,1118434..1118591,1120034..1120298,1121292..1121447,1121815..1121904,1123042..1123407,1123908..1124000,1124745..1124974,1125191..1125429,1125973..1126142,1127123..1127253,1128106..1128262,1129391..1129535,1129914..1130218,1130634..1130801,1131218..1131321,1131843..1131959,1132940..1133105,1134187..1134246,1135044..1135123,1135777..1135933,1136230..1136363,1136807..1136915,1137592..1137739,1137980..1138284,1139018..1139185,1139483..1139586,1140579..1140695,1140852..1141005,1142328..1142387,1142564..1142640,1143043..1143196,1143738..1143877,1144596..1144674,1144965..1145094,1145428..1145545,1146146..1146272,1146967..1147103,1147451..1147564,1147727..1147923,1149093..1149235,1149844..1149938,1150489..1150624,1151229..1151291,1151749..1151920,1152560..1152666,1153520..1153647,1153947..1154004,1154639..1154719,1155468..1155527,1156093..1156152,1156993..1157102,1158837..1158902,1160538..1160600,1163108..1163209,1163939..1164034,1164734..1164776,1165761..1165804,1167352..1167778))
location: region:1091349-1167778:-1
so has part: feature:1167352-1167778:-1:exon
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so has part: feature:1112563-1112689:-1:exon
so has part: feature:1111393-1111628:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1167352-1167778:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1165761-1165804:-1:exon

urn:…
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SIO_000628: feature:1163108-1163209:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1160538-1160600:-1:exon

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reference: sequence
type: ReverseStrandPosition
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reference: sequence
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urn:…
SIO_000300: 7
SIO_000628: feature:1158837-1158902:-1:exon

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reference: sequence
type: ReverseStrandPosition
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position:1158902:-1
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reference: sequence
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urn:…
SIO_000300: 8
SIO_000628: feature:1156993-1157102:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1156093-1156152:-1:exon

urn:…
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SIO_000628: feature:1155468-1155527:-1:exon

urn:…
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SIO_000628: feature:1152560-1152666:-1:exon

urn:…
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SIO_000628: feature:1151749-1151920:-1:exon

urn:…
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urn:…
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SIO_000628: feature:1150489-1150624:-1:exon

urn:…
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SIO_000628: feature:1149844-1149938:-1:exon

urn:…
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urn:…
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urn:…
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urn:…
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urn:…
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urn:…
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urn:…
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SIO_000628: feature:1101953-1102067:-1:exon

urn:…
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SIO_000628: feature:1095131-1095254:-1:exon

urn:…
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SIO_000628: feature:1094784-1094870:-1:exon

urn:…
SIO_000300: 85
SIO_000628: feature:1091349-1093441:-1:exon

VPS13C
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 87175
gene: VPS13C
product: vacuolar protein sorting 13 homolog C, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 ESTs, 1 Protein, and 99% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_030954987.1
SIO_010081: VPS13C
subclass of: SO_0000673
so part of: VPS13C
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location: region:1091349-1149882:-1
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position:1149882:-1
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urn:…
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VPS13C
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 87175
gene: VPS13C
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: vacuolar protein sorting-associated protein 13C isoform X3
translation: MVLESVVADLLNRFLGDYVENLNKSQLKLGIWGGNVALDNLQIKENALSELDVPFRIKVGQIDKLTLKIPWKNLYGEAVVATLEGLYLLIVPGASVKYDAEKEEKYLQDNKQKELARIEEALQKAAEKDKPKEEKKDTFLEKLATQVIKNVQVKITGIHVKYEDDITDPQCPISLGMTLGELSLLTTNENWTPSILNEAAKIIYKLLCLDSLSAYWNIHSKMYYHGSREQILDQLKKGIPCHGHQPEDYQYIFRPVSASARLYINPYAEVELKTPKFDCNVEVQRIIIEFTKPQYLSMIDLLESIDYMVRNAPYRRFRPNVPLHKNAREWWKYAGNSVLEVHIRRCTRMWSWSNIKQHRQLLKSYKNVYKNKLTQSKLSEETQRQIQDLERKLDVFNTVLARQQAQVETIRSGQKLLKKKSAEAEKKSGGWFSGFWGKRESRIKEDEESLVPETLDELMTPEEKAKLYTAIGYSDSSHHLSLPKQYVAHVVTLKLLSTSLTIKEDKNVAETLKVQIIDLSTKISQRPGAQAIKVEAKLENWYVTGLRQENIVPSLVASIGDSKSSLLKIEFDVNPEDSTADQSLTIESQPVEVKYDAVKTINAMVEFFQTSKGMDLERLTTATLMKLEEIKERTATGLAHIIEMRKVLDLKINLKPSYLVVPRTGFYHENSDLLILDFGTFQLNSINQGSSEASNFSSLEEIMDKAYDKFDVKIKNVQLLFGRTGEDWKKARFEHPSTLHILQPMDIHVQLAKSMVERDSRMAKFKVSGGLPLVHVRLSDQKIKAISDLIDSIPLPQKSPMSVPSTKVPAIPTIPVVGKGLLNTPQLLAEMVSDSEEEYFDFEESSEPTDSSVIKGEEIRKEEPAQEELTDLHLKFEIKEVLVELTRQKKIEETVLVFDVMHLGTEATVKTYNLAAVSYLKKISLDYYGIGGKKAPIHLISSSDKPGLDLLKVEYVKADRNGPQFQTIFNNTEQMIQVTFSSLNLLLHTEALMSAVSFLTAVSPSGSERSGETSSKEKKQEDDSRLKKVSKPSKDKDVFDFKLFAKLDAFCLNICDEKKNIAEIKIQGLDSSLCLQPSQTVFFARLKDIVVTDVDSRTLHKKAVSIVGDEVFSFNLTLNPHATEGEAYTDMSKVDGSVCLKVGCIQLVYLHKFLISLLTFLNNFQTAKETLSAATVQAAEKAATSVKDLAQRSFRLAMDIHLKAPVIVIPQSSISPSAIVIDLGLIKVQNQFVLVSSEGSSLPPVIDKMDVQLTKLKLSRITLETDLTHPDIQILHPINLSLSVKRNLSAAWFHKLPVLEVTGYLDTMNVVLSQEDLNVCLKVLTENLGEAEETQKDAKSVLQKEGKMKELERSVLIQDKSVSEGMLSEKRQITLNEDVINMLLNFEIKEVVITLMKQVQKERYPLHILTVLQLGTKTKIRNHELAAAAYLKRITMRCTEIHDSKGDPLCILNSSSERDEHLLKMEYIKADPDGPDFVTTYQSTKQNINVIFSCLNIVLHTEALLSIMSFLTFSVPSGGLPSTEKSSEHKPHMKEQEKGSTLRPVAGDAAHDDVSELKLTAKLNAFSITVCDQTCRIADIRIQGMDASVAMKPKEIKVFSRLEDIVITNVDPKTIHKKAVSIMGDEVFRFHMSLYPDATAGEAYADMSRVDGKMSLKVGCIQIIYLHKFFMSLLNFLNNFQAAQEALTAVTVQAAEMAASSMKDFAKKSFRLLMDVNLKAPVIVVPESSASCNALVADLGLIRVQNEFKLVSSDESPLPPVIDNMDVQLTHLKLSRCIISTDSQPDSEILRPVSLTLLVQRNLAAAWYHKCPTIGIKGDLKPMQIALSEGDLTVIMKILLENLGGASSQPHTVQENIEDMQIPKKGKAPHESGGSEGTLVDSGQKCVSAVQSPVECYTLLKFDFNFESLSVTLYNSDTTQESVLSVHSDKLRLGELRLHLMASAGKMFSDGSMDITVKLKACTLDDLREGIQNVTARMIDKKDDTNDTSMIDIRYKQDKN…
SIO_010081: VPS13C
subclass of: SO_0000673
so part of: VPS13C
location: complement(join(1093352..1093441,1094784..1094870,1095131..1095254,1096205..1096296,1101953..1102067,1102729..1102852,1103873..1103918,1104740..1104903,1105459..1105534,1105782..1105895,1106108..1106189,1106474..1106610,1107044..1107157,1107479..1107590,1108024..1108093,1108184..1108265,1109722..1109862,1110919..1111069,1111393..1111628,1112563..1112689,1112898..1113031,1113602..1113730,1114081..1114245,1114781..1114885,1115584..1115973,1117352..1117646,1117872..1117993,1118434..1118591,1120034..1120298,1121292..1121447,1121815..1121904,1123042..1123407,1123908..1124000,1124745..1124974,1125191..1125429,1125973..1126142,1127123..1127253,1128106..1128262,1129391..1129535,1129914..1130218,1130634..1130801,1131218..1131321,1131843..1131959,1132940..1133105,1134187..1134246,1135044..1135123,1135777..1135933,1136230..1136363,1136807..1136915,1137592..1137739,1137980..1138284,1139018..1139185,1139483..1139586,1140579..1140695,1140852..1141005,1142328..1142387,1142564..1142640,1143043..1143196,1143738..1143877,1144596..1144674,1144965..1145094,1145428..1145545,1146146..1146272,1146967..1147103,1147451..1147564,1147727..1147923,1149093..1149235,1149844..1149938,1150489..1150624,1151229..1151291,1151749..1151920,1152560..1152666,1153520..1153647,1153947..1154004,1154639..1154719,1155468..1155527,1156093..1156152,1156993..1157102,1163108..1163209,1163939..1164034,1164734..1164776,1165761..1165804,1167352..1167451))
location: region:1093352-1167451:-1
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XP_030810849.1
type: Protein
SIO_000068: ncbiprotein

position:1093352:-1
position: 1093352
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1167451:-1
position: 1167451
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1167352-1167451:-1:exon

urn:…
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SIO_000628: feature:1164734-1164776:-1:exon

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SIO_000628: feature:1156993-1157102:-1:exon

urn:…
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urn:…
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SIO_000628: feature:1155468-1155527:-1:exon

urn:…
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SIO_000628: feature:1154639-1154719:-1:exon

urn:…
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urn:…
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SIO_000628: feature:1152560-1152666:-1:exon

urn:…
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urn:…
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SIO_000628: feature:1151229-1151291:-1:exon

urn:…
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SIO_000628: feature:1150489-1150624:-1:exon

urn:…
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urn:…
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urn:…
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urn:…
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urn:…
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urn:…
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urn:…
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urn:…
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urn:…
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urn:…
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urn:…
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urn:…
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urn:…
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urn:…
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urn:…
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urn:…
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SIO_000628: feature:1137980-1138284:-1:exon

urn:…
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SIO_000628: feature:1137592-1137739:-1:exon

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SIO_000628: feature:1135777-1135933:-1:exon

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SIO_000628: feature:1130634-1130801:-1:exon

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urn:…
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urn:…
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SIO_000628: feature:1127123-1127253:-1:exon

urn:…
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SIO_000628: feature:1125973-1126142:-1:exon

urn:…
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SIO_000628: feature:1125191-1125429:-1:exon

urn:…
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SIO_000628: feature:1124745-1124974:-1:exon

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SIO_000628: feature:1123908-1124000:-1:exon

urn:…
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SIO_000628: feature:1123042-1123407:-1:exon

urn:…
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SIO_000628: feature:1121815-1121904:-1:exon

urn:…
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SIO_000628: feature:1121292-1121447:-1:exon

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SIO_000628: feature:1120034-1120298:-1:exon

urn:…
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SIO_000628: feature:1118434-1118591:-1:exon

urn:…
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SIO_000628: feature:1117872-1117993:-1:exon

urn:…
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SIO_000628: feature:1117352-1117646:-1:exon

urn:…
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SIO_000628: feature:1115584-1115973:-1:exon

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SIO_000628: feature:1114781-1114885:-1:exon

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SIO_000628: feature:1113602-1113730:-1:exon

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SIO_000628: feature:1112898-1113031:-1:exon

urn:…
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SIO_000628: feature:1111393-1111628:-1:exon

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SIO_000628: feature:1110919-1111069:-1:exon

urn:…
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SIO_000628: feature:1109722-1109862:-1:exon

urn:…
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SIO_000628: feature:1108184-1108265:-1:exon

urn:…
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SIO_000628: feature:1108024-1108093:-1:exon

urn:…
SIO_000300: 70
SIO_000628: feature:1107479-1107590:-1:exon

urn:…
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SIO_000628: feature:1107044-1107157:-1:exon

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SIO_000628: feature:1106474-1106610:-1:exon

urn:…
SIO_000300: 73
SIO_000628: feature:1106108-1106189:-1:exon

urn:…
SIO_000300: 74
SIO_000628: feature:1105782-1105895:-1:exon

urn:…
SIO_000300: 75
SIO_000628: feature:1105459-1105534:-1:exon

urn:…
SIO_000300: 76
SIO_000628: feature:1104740-1104903:-1:exon

urn:…
SIO_000300: 77
SIO_000628: feature:1103873-1103918:-1:exon

urn:…
SIO_000300: 78
SIO_000628: feature:1102729-1102852:-1:exon

urn:…
SIO_000300: 79
SIO_000628: feature:1101953-1102067:-1:exon

urn:…
SIO_000300: 80
SIO_000628: feature:1096205-1096296:-1:exon

urn:…
SIO_000300: 81
SIO_000628: feature:1095131-1095254:-1:exon

urn:…
SIO_000300: 82
SIO_000628: feature:1094784-1094870:-1:exon

urn:…
SIO_000300: 83
SIO_000628: feature:1093352-1093441:-1:exon

VPS13C
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 87175
gene: VPS13C
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: vacuolar protein sorting-associated protein 13C isoform X2
translation: MVLESVVADLLNRFLGDYVENLNKSQLKLGIWGGNVALDNLQIKENALSELDVPFRIKVGQIDKLTLKIPWKNLYGEAVVATLEGLYLLIVPGASVKYDAEKEEKYLQDNKQKELARIEEALQKAAEKGTHSQDSLYGLESLVYKDTKPGRKRKKYKKHFKRPFRGRDHSKDKPKEEKKDTFLEKLATQVIKNVQVKITGIHVKYEDDITDPQCPISLGMTLGELSLLTTNENWTPSILNEAAKIIYKLLCLDSLSAYWNIHSKMYYHGSREQILDQLKKGIPCHGHQPEDYQYIFRPVSASARLYINPYAEVELKTPKFDCNVEVQRIIIEFTKPQYLSMIDLLESIDYMVRNAPYRRFRPNVPLHKNAREWWKYAGNSVLEVHIRRCTRMWSWSNIKQHRQLLKSYKNVYKNKLTQSKLSEETQRQIQDLERKLDVFNTVLARQQAQVETIRSGQKLLKKKSAEAEKKSGGWFSGFWGKRESRIKEDEESLVPETLDELMTPEEKAKLYTAIGYSDSSHHLSLPKQYVAHVVTLKLLSTSLTIKEDKNVAETLKVQIIDLSTKISQRPGAQAIKVEAKLENWYVTGLRQENIVPSLVASIGDSKSSLLKIEFDVNPEDSTADQSLTIESQPVEVKYDAVKTINAMVEFFQTSKGMDLERLTTATLMKLEEIKERTATGLAHIIEMRKVLDLKINLKPSYLVVPRTGFYHENSDLLILDFGTFQLNSINQGSSEASNFSSLEEIMDKAYDKFDVKIKNVQLLFGRTGEDWKKARFEHPSTLHILQPMDIHVQLAKSMVERDSRMAKFKVSGGLPLVHVRLSDQKIKAISDLIDSIPLPQKSPMSVPSTKVPAIPTIPVVGKGLLNTPQLLAEMVSDSEEEYFDFEESSEPTDSSVIKGEEIRKEEPAQEELTDLHLKFEIKEVLVELTRQKKIEETVLVFDVMHLGTEATVKTYNLAAVSYLKKISLDYYGIGGKKAPIHLISSSDKPGLDLLKVEYVKADRNGPQFQTIFNNTEQMIQVTFSSLNLLLHTEALMSAVSFLTAVSPSGSERSGETSSKEKKQEDDSRLKKVSKPSKDKDVFDFKLFAKLDAFCLNICDEKKNIAEIKIQGLDSSLCLQPSQTVFFARLKDIVVTDVDSRTLHKKAVSIVGDEVFSFNLTLNPHATEGEAYTDMSKVDGSVCLKVGCIQLVYLHKFLISLLTFLNNFQTAKETLSAATVQAAEKAATSVKDLAQRSFRLAMDIHLKAPVIVIPQSSISPSAIVIDLGLIKVQNQFVLVSSEGSSLPPVIDKMDVQLTKLKLSRITLETDLTHPDIQILHPINLSLSVKRNLSAAWFHKLPVLEVTGYLDTMNVVLSQEDLNVCLKVLTENLGEAEETQKDAKSVLQKEGKMKELERSVLIQDKSVSEGMLSEKRQITLNEDVINMLLNFEIKEVVITLMKQVQKERYPLHILTVLQLGTKTKIRNHELAAAAYLKRITMRCTEIHDSKGDPLCILNSSSERDEHLLKMEYIKADPDGPDFVTTYQSTKQNINVIFSCLNIVLHTEALLSIMSFLTFSVPSGGLPSTEKSSEHKPHMKEQEKGSTLRPVAGDAAHDDVSELKLTAKLNAFSITVCDQTCRIADIRIQGMDASVAMKPKEIKVFSRLEDIVITNVDPKTIHKKAVSIMGDEVFRFHMSLYPDATAGEAYADMSRVDGKMSLKVGCIQIIYLHKFFMSLLNFLNNFQAAQEALTAVTVQAAEMAASSMKDFAKKSFRLLMDVNLKAPVIVVPESSASCNALVADLGLIRVQNEFKLVSSDESPLPPVIDNMDVQLTHLKLSRCIISTDSQPDSEILRPVSLTLLVQRNLAAAWYHKCPTIGIKGDLKPMQIALSEGDLTVIMKILLENLGGASSQPHTVQENIEDMQIPKKGKAPHESGGSEGTLVDSGQKCVSAVQSPVECYTLLKFDFNFESLSVTLYNSDTTQESVLSVHSDKLRLGELRLHLMASAGKMFSDGSMDITV…
SIO_010081: VPS13C
subclass of: SO_0000673
so part of: VPS13C
location: complement(join(1093352..1093441,1094784..1094870,1095131..1095254,1096205..1096296,1101953..1102067,1102729..1102852,1103873..1103918,1104740..1104903,1105459..1105534,1105782..1105895,1106108..1106189,1106474..1106610,1107044..1107157,1107479..1107590,1108024..1108093,1108184..1108265,1109722..1109862,1110919..1111069,1111393..1111628,1112563..1112689,1112898..1113031,1113602..1113730,1114081..1114245,1114781..1114885,1115584..1115973,1117352..1117646,1117872..1117993,1118434..1118591,1120034..1120298,1121292..1121447,1121815..1121904,1123042..1123407,1123908..1124000,1124745..1124974,1125191..1125429,1125973..1126142,1127123..1127253,1128106..1128262,1129391..1129535,1129914..1130218,1130634..1130801,1131218..1131321,1131843..1131959,1132940..1133105,1134187..1134246,1135044..1135123,1135777..1135933,1136230..1136363,1136807..1136915,1137592..1137739,1137980..1138284,1139018..1139185,1139483..1139586,1140579..1140695,1140852..1141005,1142328..1142387,1142564..1142640,1143043..1143196,1143738..1143877,1144596..1144674,1144965..1145094,1145428..1145545,1146146..1146272,1146967..1147103,1147451..1147564,1147727..1147923,1149093..1149235,1149844..1149938,1150489..1150624,1151229..1151291,1151749..1151920,1152560..1152666,1153520..1153647,1153947..1154004,1154639..1154719,1155468..1155527,1156093..1156152,1156993..1157102,1158837..1158902,1160538..1160600,1163108..1163209,1163939..1164034,1164734..1164776,1165761..1165804,1167352..1167451))
location: region:1093352-1167451:-1
so has part: feature:1167352-1167451:-1:exon
so has part: feature:1165761-1165804:-1:exon
so has part: feature:1164734-1164776:-1:exon
so has part: feature:1163939-1164034:-1:exon
so has part: feature:1163108-1163209:-1:exon
so has part: feature:1160538-1160600:-1:exon
so has part: feature:1158837-1158902:-1:exon
so has part: feature:1156993-1157102:-1:exon
so has part: feature:1156093-1156152:-1:exon
so has part: feature:1155468-1155527:-1:exon
so has part: feature:1154639-1154719:-1:exon
so has part: feature:1153947-1154004:-1:exon
so has part: feature:1153520-1153647:-1:exon
so has part: feature:1152560-1152666:-1:exon
so has part: feature:1151749-1151920:-1:exon
so has part: feature:1151229-1151291:-1:exon
so has part: feature:1150489-1150624:-1:exon
so has part: feature:1149844-1149938:-1:exon
so has part: feature:1149093-1149235:-1:exon
so has part: feature:1147727-1147923:-1:exon
so has part: feature:1147451-1147564:-1:exon
so has part: feature:1146967-1147103:-1:exon
so has part: feature:1146146-1146272:-1:exon
so has part: feature:1145428-1145545:-1:exon
so has part: feature:1144965-1145094:-1:exon
so has part: feature:1144596-1144674:-1:exon
so has part: feature:1143738-1143877:-1:exon
so has part: feature:1143043-1143196:-1:exon
so has part: feature:1142564-1142640:-1:exon
so has part: feature:1142328-1142387:-1:exon
so has part: feature:1140852-1141005:-1:exon
so has part: feature:1140579-1140695:-1:exon
so has part: feature:1139483-1139586:-1:exon
so has part: feature:1139018-1139185:-1:exon
so has part: feature:1137980-1138284:-1:exon
so has part: feature:1137592-1137739:-1:exon
so has part: feature:1136807-1136915:-1:exon
so has part: feature:1136230-1136363:-1:exon
so has part: feature:1135777-1135933:-1:exon
so has part: feature:1135044-1135123:-1:exon
so has part: feature:1134187-1134246:-1:exon
so has part: feature:1132940-1133105:-1:exon
so has part: feature:1131843-1131959:-1:exon
so has part: feature:1131218-1131321:-1:exon
so has part: feature:1130634-1130801:-1:exon
so has part: feature:1129914-1130218:-1:exon
so has part: feature:1129391-1129535:-1:exon
so has part: feature:1128106-1128262:-1:exon
so has part: feature:1127123-1127253:-1:exon
so has part: feature:1125973-1126142:-1:exon
so has part: feature:1125191-1125429:-1:exon
so has part: feature:1124745-1124974:-1:exon
so has part: feature:1123908-1124000:-1:exon
so has part: feature:1123042-1123407:-1:exon
so has part: feature:1121815-1121904:-1:exon
so has part: feature:1121292-1121447:-1:exon
so has part: feature:1120034-1120298:-1:exon
so has part: feature:1118434-1118591:-1:exon
so has part: feature:1117872-1117993:-1:exon
so has part: feature:1117352-1117646:-1:exon
so has part: feature:1115584-1115973:-1:exon
so has part: feature:1114781-1114885:-1:exon
so has part: feature:1114081-1114245:-1:exon
so has part: feature:1113602-1113730:-1:exon
so has part: feature:1112898-1113031:-1:exon
so has part: feature:1112563-1112689:-1:exon

XP_030810848.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1167352-1167451:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1165761-1165804:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1164734-1164776:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1163939-1164034:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1163108-1163209:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1160538-1160600:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1158837-1158902:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1156993-1157102:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1156093-1156152:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1155468-1155527:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1154639-1154719:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1153947-1154004:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1153520-1153647:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1152560-1152666:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1151749-1151920:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1151229-1151291:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1150489-1150624:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:1149844-1149938:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:1149093-1149235:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:1147727-1147923:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:1147451-1147564:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:1146967-1147103:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:1146146-1146272:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:1145428-1145545:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:1144965-1145094:-1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:1144596-1144674:-1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:1143738-1143877:-1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:1143043-1143196:-1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:1142564-1142640:-1:exon

urn:…
SIO_000300: 30
SIO_000628: feature:1142328-1142387:-1:exon

urn:…
SIO_000300: 31
SIO_000628: feature:1140852-1141005:-1:exon

urn:…
SIO_000300: 32
SIO_000628: feature:1140579-1140695:-1:exon

urn:…
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SIO_000628: feature:1139483-1139586:-1:exon

urn:…
SIO_000300: 34
SIO_000628: feature:1139018-1139185:-1:exon

urn:…
SIO_000300: 35
SIO_000628: feature:1137980-1138284:-1:exon

urn:…
SIO_000300: 36
SIO_000628: feature:1137592-1137739:-1:exon

urn:…
SIO_000300: 37
SIO_000628: feature:1136807-1136915:-1:exon

urn:…
SIO_000300: 38
SIO_000628: feature:1136230-1136363:-1:exon

urn:…
SIO_000300: 39
SIO_000628: feature:1135777-1135933:-1:exon

urn:…
SIO_000300: 40
SIO_000628: feature:1135044-1135123:-1:exon

urn:…
SIO_000300: 41
SIO_000628: feature:1134187-1134246:-1:exon

urn:…
SIO_000300: 42
SIO_000628: feature:1132940-1133105:-1:exon

urn:…
SIO_000300: 43
SIO_000628: feature:1131843-1131959:-1:exon

urn:…
SIO_000300: 44
SIO_000628: feature:1131218-1131321:-1:exon

urn:…
SIO_000300: 45
SIO_000628: feature:1130634-1130801:-1:exon

urn:…
SIO_000300: 46
SIO_000628: feature:1129914-1130218:-1:exon

urn:…
SIO_000300: 47
SIO_000628: feature:1129391-1129535:-1:exon

urn:…
SIO_000300: 48
SIO_000628: feature:1128106-1128262:-1:exon

urn:…
SIO_000300: 49
SIO_000628: feature:1127123-1127253:-1:exon

urn:…
SIO_000300: 50
SIO_000628: feature:1125973-1126142:-1:exon

urn:…
SIO_000300: 51
SIO_000628: feature:1125191-1125429:-1:exon

urn:…
SIO_000300: 52
SIO_000628: feature:1124745-1124974:-1:exon

urn:…
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SIO_000628: feature:1123908-1124000:-1:exon

urn:…
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SIO_000628: feature:1123042-1123407:-1:exon

urn:…
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SIO_000628: feature:1121815-1121904:-1:exon

urn:…
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SIO_000628: feature:1121292-1121447:-1:exon

urn:…
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SIO_000300: 58
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urn:…
SIO_000300: 59
SIO_000628: feature:1117872-1117993:-1:exon

urn:…
SIO_000300: 60
SIO_000628: feature:1117352-1117646:-1:exon

urn:…
SIO_000300: 61
SIO_000628: feature:1115584-1115973:-1:exon

urn:…
SIO_000300: 62
SIO_000628: feature:1114781-1114885:-1:exon

urn:…
SIO_000300: 63
SIO_000628: feature:1114081-1114245:-1:exon

urn:…
SIO_000300: 64
SIO_000628: feature:1113602-1113730:-1:exon

urn:…
SIO_000300: 65
SIO_000628: feature:1112898-1113031:-1:exon

urn:…
SIO_000300: 66
SIO_000628: feature:1112563-1112689:-1:exon

urn:…
SIO_000300: 67
SIO_000628: feature:1111393-1111628:-1:exon

urn:…
SIO_000300: 68
SIO_000628: feature:1110919-1111069:-1:exon

urn:…
SIO_000300: 69
SIO_000628: feature:1109722-1109862:-1:exon

urn:…
SIO_000300: 70
SIO_000628: feature:1108184-1108265:-1:exon

urn:…
SIO_000300: 71
SIO_000628: feature:1108024-1108093:-1:exon

urn:…
SIO_000300: 72
SIO_000628: feature:1107479-1107590:-1:exon

urn:…
SIO_000300: 73
SIO_000628: feature:1107044-1107157:-1:exon

urn:…
SIO_000300: 74
SIO_000628: feature:1106474-1106610:-1:exon

urn:…
SIO_000300: 75
SIO_000628: feature:1106108-1106189:-1:exon

urn:…
SIO_000300: 76
SIO_000628: feature:1105782-1105895:-1:exon

urn:…
SIO_000300: 77
SIO_000628: feature:1105459-1105534:-1:exon

urn:…
SIO_000300: 78
SIO_000628: feature:1104740-1104903:-1:exon

urn:…
SIO_000300: 79
SIO_000628: feature:1103873-1103918:-1:exon

urn:…
SIO_000300: 80
SIO_000628: feature:1102729-1102852:-1:exon

urn:…
SIO_000300: 81
SIO_000628: feature:1101953-1102067:-1:exon

urn:…
SIO_000300: 82
SIO_000628: feature:1096205-1096296:-1:exon

urn:…
SIO_000300: 83
SIO_000628: feature:1095131-1095254:-1:exon

urn:…
SIO_000300: 84
SIO_000628: feature:1094784-1094870:-1:exon

urn:…
SIO_000300: 85
SIO_000628: feature:1093352-1093441:-1:exon

VPS13C
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 87175
gene: VPS13C
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: vacuolar protein sorting-associated protein 13C isoform X1
translation: MMQETINAMVEFFQTSKGMDLERLTTATLMKLEEIKERTATGLAHIIEMRKVLDLKINLKPSYLVVPRTGFYHENSDLLILDFGTFQLNSINQGSSEASNFSSLEEIMDKAYDKFDVKIKNVQLLFGRTGEDWKKARFEHPSTLHILQPMDIHVQLAKSMVERDSRMAKFKVSGGLPLVHVRLSDQKIKAISDLIDSIPLPQKSPMSVPSTKVPAIPTIPVVGKGLLNTPQLLAEMVSDSEEEYFDFEESSEPTDSSVIKGEEIRKEEPAQEELTDLHLKFEIKEVLVELTRQKKIEETVLVFDVMHLGTEATVKTYNLAAVSYLKKISLDYYGIGGKKAPIHLISSSDKPGLDLLKVEYVKADRNGPQFQTIFNNTEQMIQVTFSSLNLLLHTEALMSAVSFLTAVSPSGSERSGETSSKEKKQEDDSRLKKVSKPSKDKDVFDFKLFAKLDAFCLNICDEKKNIAEIKIQGLDSSLCLQPSQTVFFARLKDIVVTDVDSRTLHKKAVSIVGDEVFSFNLTLNPHATEGEAYTDMSKVDGSVCLKVGCIQLVYLHKFLISLLTFLNNFQTAKETLSAATVQAAEKAATSVKDLAQRSFRLAMDIHLKAPVIVIPQSSISPSAIVIDLGLIKVQNQFVLVSSEGSSLPPVIDKMDVQLTKLKLSRITLETDLTHPDIQILHPINLSLSVKRNLSAAWFHKLPVLEVTGYLDTMNVVLSQEDLNVCLKVLTENLGEAEETQKDAKSVLQKEGKMKELERSVLIQDKSVSEGMLSEKRQITLNEDVINMLLNFEIKEVVITLMKQVQKERYPLHILTVLQLGTKTKIRNHELAAAAYLKRITMRCTEIHDSKGDPLCILNSSSERDEHLLKMEYIKADPDGPDFVTTYQSTKQNINVIFSCLNIVLHTEALLSIMSFLTFSVPSGGLPSTEKSSEHKPHMKEQEKGSTLRPVAGDAAHDDVSELKLTAKLNAFSITVCDQTCRIADIRIQGMDASVAMKPKEIKVFSRLEDIVITNVDPKTIHKKAVSIMGDEVFRFHMSLYPDATAGEAYADMSRVDGKMSLKVGCIQIIYLHKFFMSLLNFLNNFQAAQEALTAVTVQAAEMAASSMKDFAKKSFRLLMDVNLKAPVIVVPESSASCNALVADLGLIRVQNEFKLVSSDESPLPPVIDNMDVQLTHLKLSRCIISTDSQPDSEILRPVSLTLLVQRNLAAAWYHKCPTIGIKGDLKPMQIALSEGDLTVIMKILLENLGGASSQPHTVQENIEDMQIPKKGKAPHESGGSEGTLVDSGQKCVSAVQSPVECYTLLKFDFNFESLSVTLYNSDTTQESVLSVHSDKLRLGELRLHLMASAGKMFSDGSMDITVKLKACTLDDLREGIQNVTARMIDKKDDTNDTSMIDIRYKQDKNGTEVVAVLDKLYICASMEFLLTVAHFFIKSMPISSAEGSAQFQLKQVAAGKSKADTEISVRPNMTVKAVIMDPEIVFVANLTSADAPALKVSFQCDFSLTSDKLAQRMTAQVMAFKVLACAFLKEKQSKNVTTVLRPCSLVMENMVHTSGLHTVAVTIEELAIKISPIILNTVVTIMAALKPKTTEEDSRGATEVSENLWQVKPVDECNAWFLGVDIATEATETFRDHEQILKQEKFDIVVKSVQMTLECGLGHRTVPLLLVESTFSGVLKNWSSLMEVTADMSLEVHYYNETYAVWEPLIERVEGGRKQWNLKLEMKTNPVQERSLLPGDDFIVIPEPQTAINISSMDTMNITISKCCLAVFSNLAKAFSEATASTFGYSFKETAPIIVKNALGVSLKVLPSSNFRIVGSVEKENVNEIETGQSMELEYSVFDAPQRGRLSALHRQESSVFSLNLELEGYKEALSIPVAKPGRRLYSVRDGADRPDSVVVQIDATEGNKVITVRSPLQIKNHFSIPFVIYQLAKGSKLLKPIGISKPEEEFHVPLHSYRCHLYVQPTGIFEGQYKESTTYIAWREELHRSNEVKCLLQCPATET…
SIO_010081: VPS13C
subclass of: SO_0000673
so part of: VPS13C
location: complement(join(1093352..1093441,1094784..1094870,1095131..1095254,1096205..1096296,1101953..1102067,1102729..1102852,1103873..1103918,1104740..1104903,1105459..1105534,1105782..1105895,1106108..1106189,1106474..1106610,1107044..1107157,1107479..1107590,1108024..1108093,1108184..1108265,1109722..1109862,1110919..1111069,1111393..1111628,1112563..1112689,1112898..1113031,1113602..1113730,1114081..1114245,1114781..1114885,1115584..1115973,1117352..1117646,1117872..1117993,1118434..1118591,1120034..1120298,1121292..1121447,1121815..1121904,1123042..1123407,1123908..1124000,1124745..1124974,1125191..1125429,1125973..1126142,1127123..1127253,1128106..1128262,1129391..1129535,1129914..1130218,1130634..1130801,1131218..1131321,1131843..1131959,1132940..1133105,1134187..1134246,1135044..1135123,1135777..1135933,1136230..1136363,1136807..1136915,1137592..1137739,1137980..1138284,1139018..1139185,1139483..1139586,1140579..1140695,1140852..1141005,1142328..1142387,1142564..1142640,1143043..1143196,1143738..1143877,1144596..1144674,1144965..1145094,1145428..1145545,1146146..1146272,1146967..1147103,1147451..1147566,1147731..1147738))
location: region:1093352-1147738:-1
so has part: feature:1147731-1147738:-1:exon
so has part: feature:1147451-1147566:-1:exon
so has part: feature:1146967-1147103:-1:exon
so has part: feature:1146146-1146272:-1:exon
so has part: feature:1145428-1145545:-1:exon
so has part: feature:1144965-1145094:-1:exon
so has part: feature:1144596-1144674:-1:exon
so has part: feature:1143738-1143877:-1:exon
so has part: feature:1143043-1143196:-1:exon
so has part: feature:1142564-1142640:-1:exon
so has part: feature:1142328-1142387:-1:exon
so has part: feature:1140852-1141005:-1:exon
so has part: feature:1140579-1140695:-1:exon
so has part: feature:1139483-1139586:-1:exon
so has part: feature:1139018-1139185:-1:exon
so has part: feature:1137980-1138284:-1:exon
so has part: feature:1137592-1137739:-1:exon
so has part: feature:1136807-1136915:-1:exon
so has part: feature:1136230-1136363:-1:exon
so has part: feature:1135777-1135933:-1:exon
so has part: feature:1135044-1135123:-1:exon
so has part: feature:1134187-1134246:-1:exon
so has part: feature:1132940-1133105:-1:exon
so has part: feature:1131843-1131959:-1:exon
so has part: feature:1131218-1131321:-1:exon
so has part: feature:1130634-1130801:-1:exon
so has part: feature:1129914-1130218:-1:exon
so has part: feature:1129391-1129535:-1:exon
so has part: feature:1128106-1128262:-1:exon
so has part: feature:1127123-1127253:-1:exon
so has part: feature:1125973-1126142:-1:exon
so has part: feature:1125191-1125429:-1:exon
so has part: feature:1124745-1124974:-1:exon
so has part: feature:1123908-1124000:-1:exon
so has part: feature:1123042-1123407:-1:exon
so has part: feature:1121815-1121904:-1:exon
so has part: feature:1121292-1121447:-1:exon
so has part: feature:1120034-1120298:-1:exon
so has part: feature:1118434-1118591:-1:exon
so has part: feature:1117872-1117993:-1:exon
so has part: feature:1117352-1117646:-1:exon
so has part: feature:1115584-1115973:-1:exon
so has part: feature:1114781-1114885:-1:exon
so has part: feature:1114081-1114245:-1:exon
so has part: feature:1113602-1113730:-1:exon
so has part: feature:1112898-1113031:-1:exon
so has part: feature:1112563-1112689:-1:exon
so has part: feature:1111393-1111628:-1:exon
so has part: feature:1110919-1111069:-1:exon
so has part: feature:1109722-1109862:-1:exon
so has part: feature:1108184-1108265:-1:exon
so has part: feature:1108024-1108093:-1:exon
so has part: feature:1107479-1107590:-1:exon
so has part: feature:1107044-1107157:-1:exon
so has part: feature:1106474-1106610:-1:exon
so has part: feature:1106108-1106189:-1:exon
so has part: feature:1105782-1105895:-1:exon
so has part: feature:1105459-1105534:-1:exon
so has part: feature:1104740-1104903:-1:exon
so has part: feature:1103873-1103918:-1:exon
so has part: feature:1102729-1102852:-1:exon
so has part: feature:1101953-1102067:-1:exon
so has part: feature:1096205-1096296:-1:exon
so has part: feature:1095131-1095254:-1:exon
so has part: feature:1094784-1094870:-1:exon
so has part: feature:1093352-1093441:-1:exon

XP_030810847.1
type: Protein
SIO_000068: ncbiprotein

position:1147738:-1
position: 1147738
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1147731-1147738:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1147451-1147566:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1146967-1147103:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1146146-1146272:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1145428-1145545:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1144965-1145094:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1144596-1144674:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1143738-1143877:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1143043-1143196:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1142564-1142640:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1142328-1142387:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1140852-1141005:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1140579-1140695:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1139483-1139586:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1139018-1139185:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1137980-1138284:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1137592-1137739:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:1136807-1136915:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:1136230-1136363:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:1135777-1135933:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:1135044-1135123:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:1134187-1134246:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:1132940-1133105:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:1131843-1131959:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:1131218-1131321:-1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:1130634-1130801:-1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:1129914-1130218:-1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:1129391-1129535:-1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:1128106-1128262:-1:exon

urn:…
SIO_000300: 30
SIO_000628: feature:1127123-1127253:-1:exon

urn:…
SIO_000300: 31
SIO_000628: feature:1125973-1126142:-1:exon

urn:…
SIO_000300: 32
SIO_000628: feature:1125191-1125429:-1:exon

urn:…
SIO_000300: 33
SIO_000628: feature:1124745-1124974:-1:exon

urn:…
SIO_000300: 34
SIO_000628: feature:1123908-1124000:-1:exon

urn:…
SIO_000300: 35
SIO_000628: feature:1123042-1123407:-1:exon

urn:…
SIO_000300: 36
SIO_000628: feature:1121815-1121904:-1:exon

urn:…
SIO_000300: 37
SIO_000628: feature:1121292-1121447:-1:exon

urn:…
SIO_000300: 38
SIO_000628: feature:1120034-1120298:-1:exon

urn:…
SIO_000300: 39
SIO_000628: feature:1118434-1118591:-1:exon

urn:…
SIO_000300: 40
SIO_000628: feature:1117872-1117993:-1:exon

urn:…
SIO_000300: 41
SIO_000628: feature:1117352-1117646:-1:exon

urn:…
SIO_000300: 42
SIO_000628: feature:1115584-1115973:-1:exon

urn:…
SIO_000300: 43
SIO_000628: feature:1114781-1114885:-1:exon

urn:…
SIO_000300: 44
SIO_000628: feature:1114081-1114245:-1:exon

urn:…
SIO_000300: 45
SIO_000628: feature:1113602-1113730:-1:exon

urn:…
SIO_000300: 46
SIO_000628: feature:1112898-1113031:-1:exon

urn:…
SIO_000300: 47
SIO_000628: feature:1112563-1112689:-1:exon

urn:…
SIO_000300: 48
SIO_000628: feature:1111393-1111628:-1:exon

urn:…
SIO_000300: 49
SIO_000628: feature:1110919-1111069:-1:exon

urn:…
SIO_000300: 50
SIO_000628: feature:1109722-1109862:-1:exon

urn:…
SIO_000300: 51
SIO_000628: feature:1108184-1108265:-1:exon

urn:…
SIO_000300: 52
SIO_000628: feature:1108024-1108093:-1:exon

urn:…
SIO_000300: 53
SIO_000628: feature:1107479-1107590:-1:exon

urn:…
SIO_000300: 54
SIO_000628: feature:1107044-1107157:-1:exon

urn:…
SIO_000300: 55
SIO_000628: feature:1106474-1106610:-1:exon

urn:…
SIO_000300: 56
SIO_000628: feature:1106108-1106189:-1:exon

urn:…
SIO_000300: 57
SIO_000628: feature:1105782-1105895:-1:exon

urn:…
SIO_000300: 58
SIO_000628: feature:1105459-1105534:-1:exon

urn:…
SIO_000300: 59
SIO_000628: feature:1104740-1104903:-1:exon

urn:…
SIO_000300: 60
SIO_000628: feature:1103873-1103918:-1:exon

urn:…
SIO_000300: 61
SIO_000628: feature:1102729-1102852:-1:exon

urn:…
SIO_000300: 62
SIO_000628: feature:1101953-1102067:-1:exon

urn:…
SIO_000300: 63
SIO_000628: feature:1096205-1096296:-1:exon

urn:…
SIO_000300: 64
SIO_000628: feature:1095131-1095254:-1:exon

urn:…
SIO_000300: 65
SIO_000628: feature:1094784-1094870:-1:exon

urn:…
SIO_000300: 66
SIO_000628: feature:1093352-1093441:-1:exon

LOC115907491
type: Gene
subclass of: SO_0000704
RO_0002162: 87175
gene: LOC115907491
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1167450..1169163
location: region:1167450-1169163:1
so has part: feature:1167450-1169163:1:exon
subclass of: SO_0000010

115907491
type: Gene
SIO_000068: ncbigene

position:1167450:1
position: 1167450
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1169163:1
position: 1169163
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1167450-1169163:1:exon

LOC115907491
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 87175
gene: LOC115907491
product: serine/arginine repetitive matrix protein 3-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 93% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_030955433.1
SIO_010081: LOC115907491
subclass of: SO_0000673
so part of: LOC115907491
location: join(1167450..1167454,1167603..1168083,1169098..1169163)
location: region:1167450-1169163:1
so has part: feature:1167450-1167454:1:exon
so has part: feature:1167603-1168083:1:exon
so has part: feature:1169098-1169163:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1167450-1167454:1:exon

position:1167454:1
position: 1167454
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1167603-1168083:1:exon

position:1167603:1
position: 1167603
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1168083:1
position: 1168083
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1169098-1169163:1:exon

position:1169098:1
position: 1169098
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC115907491
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 87175
gene: LOC115907491
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: serine/arginine repetitive matrix protein 3-like
translation: MAWGAWGDSERRRGGSAEHGQTPGGCGESRARRRRSEPRGRTSARSGAGSRRRHTAPPCGADPRLPRRFAGRGERVREERLWAPSRHWYRAPAPHPQAPSRHWYRAPAPHPQALSRHRHRAPAPHPQAPSRHRHRAPAPDPQAPSRHWHRASAPQQPRRAVRSLGFSRHWEETMEENMSGNCE
SIO_010081: LOC115907491
subclass of: SO_0000673
so part of: LOC115907491
location: join(1167450..1167454,1167603..1168083,1169098..1169163)
location: region:1167450-1169163:1
so has part: feature:1167450-1167454:1:exon
so has part: feature:1167603-1168083:1:exon
so has part: feature:1169098-1169163:1:exon

XP_030811293.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1167450-1167454:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1167603-1168083:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1169098-1169163:1:exon

LOC115907480
type: Gene
subclass of: SO_0000704
RO_0002162: 87175
gene: LOC115907480
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1194661..1196480)
location: region:1194661-1196480:-1
so has part: feature:1194661-1196480:-1:exon
subclass of: SO_0000010

115907480
type: Gene
SIO_000068: ncbigene

position:1194661:-1
position: 1194661
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1196480:-1
position: 1196480
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1194661-1196480:-1:exon

LOC115907480
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 87175
gene: LOC115907480
product: C2 calcium-dependent domain-containing protein 4C-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 1 EST, 7 Proteins, and 95% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XM_030955419.1
SIO_010081: LOC115907480
subclass of: SO_0000673
so part of: LOC115907480
location: complement(join(1194661..1196081,1196334..1196480))
location: region:1194661-1196480:-1
so has part: feature:1196334-1196480:-1:exon
so has part: feature:1194661-1196081:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1196334-1196480:-1:exon

position:1196334:-1
position: 1196334
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1194661-1196081:-1:exon

position:1196081:-1
position: 1196081
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC115907480
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 87175
gene: LOC115907480
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: C2 calcium-dependent domain-containing protein 4C-like
translation: MWLLEKIRASHENGNLPSSSFLGLPQSQNLPEKAQLRAAAFPNVITPDRIPEFCIPPRLTSSGPIKGSSFHQDHSSVDAALAADYSPSSCPHLIQVESVEEEIPALEEESTNADPQSQAALSLPHFPRAATSYGFCTLLESPHTRRKESIFHGDPRAALPSLKLSRSRANTFSGKGSMSNPIAISFASVRLPPKHLSLHRQGACDSDTASSSDSSPFSSPLLTRSPPRPCSLIKAQSQEGLLCRALKDKSKHSMPRNNSLSTEESSSTDNSPSAIRRASEGLLGIRSFSTSCSPLFPVDLSCSRERLVGESAVVMDKGGVLRLSAEYCSENERLRIRLISAEGLYDDSVEPKTINCCISFSLVPGKTQKQRSTVIKRSRNPIFNEDFFFDGIAEEELYSLSVRMKATNKGCSMKRDYTLGERELSLMSMLAV
SIO_010081: LOC115907480
subclass of: SO_0000673
so part of: LOC115907480
location: complement(1194728..1196026)
location: region:1194728-1196026:-1
so has part: feature:1194728-1196026:-1:exon

XP_030811279.1
type: Protein
SIO_000068: ncbiprotein

position:1194728:-1
position: 1194728
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1196026:-1
position: 1196026
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1194728-1196026:-1:exon

TLN2
type: Gene
subclass of: SO_0000704
RO_0002162: 87175
gene: TLN2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1223342..1365391
location: region:1223342-1365391:1
so has part: feature:1223342-1365391:1:exon
subclass of: SO_0000010

115907648
type: Gene
SIO_000068: ncbigene

position:1223342:1
position: 1223342
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1365391:1
position: 1365391
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1223342-1365391:1:exon

TLN2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 87175
gene: TLN2
product: talin 2, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 22 ESTs, 12 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_030955643.1
SIO_010081: TLN2
subclass of: SO_0000673
so part of: TLN2
location: join(1223342..1223492,1227758..1227871,1244925..1244993,1266170..1266252,1277451..1277621,1281425..1281522,1282169..1282298,1283567..1283719,1284865..1285007,1286407..1286534,1291559..1291622,1293765..1293869,1294630..1294785,1295680..1295781,1298598..1298674,1300268..1300448,1301990..1302103,1302769..1302877,1303559..1303767,1303899..1303997,1305471..1305638,1305770..1306064,1307401..1307567,1308626..1308754,1310160..1310273,1310576..1310689,1311988..1312122,1313037..1313165,1313781..1313883,1315439..1315647,1316455..1316574,1317425..1317622,1319649..1319788,1322464..1322557,1324080..1324169,1325299..1325421,1326640..1326783,1327052..1327213,1328308..1328448,1329551..1329732,1330154..1330286,1331723..1331824,1332581..1332751,1333353..1333499,1334332..1334433,1335768..1335887,1337391..1337537,1338280..1338446,1339163..1339346,1339974..1340099,1340393..1340509,1342497..1342682,1346383..1346490,1348534..1348639,1350223..1350347,1356858..1356983,1358724..1358786,1358879..1359061,1361238..1361363,1362290..1365391)
location: region:1223342-1365391:1
so has part: feature:1223342-1223492:1:exon
so has part: feature:1227758-1227871:1:exon
so has part: feature:1244925-1244993:1:exon
so has part: feature:1266170-1266252:1:exon
so has part: feature:1277451-1277621:1:exon
so has part: feature:1281425-1281522:1:exon
so has part: feature:1282169-1282298:1:exon
so has part: feature:1283567-1283719:1:exon
so has part: feature:1284865-1285007:1:exon
so has part: feature:1286407-1286534:1:exon
so has part: feature:1291559-1291622:1:exon
so has part: feature:1293765-1293869:1:exon
so has part: feature:1294630-1294785:1:exon
so has part: feature:1295680-1295781:1:exon
so has part: feature:1298598-1298674:1:exon
so has part: feature:1300268-1300448:1:exon
so has part: feature:1301990-1302103:1:exon
so has part: feature:1302769-1302877:1:exon
so has part: feature:1303559-1303767:1:exon
so has part: feature:1303899-1303997:1:exon
so has part: feature:1305471-1305638:1:exon
so has part: feature:1305770-1306064:1:exon
so has part: feature:1307401-1307567:1:exon
so has part: feature:1308626-1308754:1:exon
so has part: feature:1310160-1310273:1:exon
so has part: feature:1310576-1310689:1:exon
so has part: feature:1311988-1312122:1:exon
so has part: feature:1313037-1313165:1:exon
so has part: feature:1313781-1313883:1:exon
so has part: feature:1315439-1315647:1:exon
so has part: feature:1316455-1316574:1:exon
so has part: feature:1317425-1317622:1:exon
so has part: feature:1319649-1319788:1:exon
so has part: feature:1322464-1322557:1:exon
so has part: feature:1324080-1324169:1:exon
so has part: feature:1325299-1325421:1:exon
so has part: feature:1326640-1326783:1:exon
so has part: feature:1327052-1327213:1:exon
so has part: feature:1328308-1328448:1:exon
so has part: feature:1329551-1329732:1:exon
so has part: feature:1330154-1330286:1:exon
so has part: feature:1331723-1331824:1:exon
so has part: feature:1332581-1332751:1:exon
so has part: feature:1333353-1333499:1:exon
so has part: feature:1334332-1334433:1:exon
so has part: feature:1335768-1335887:1:exon
so has part: feature:1337391-1337537:1:exon
so has part: feature:1338280-1338446:1:exon
so has part: feature:1339163-1339346:1:exon
so has part: feature:1339974-1340099:1:exon
so has part: feature:1340393-1340509:1:exon
so has part: feature:1342497-1342682:1:exon
so has part: feature:1346383-1346490:1:exon
so has part: feature:1348534-1348639:1:exon
so has part: feature:1350223-1350347:1:exon
so has part: feature:1356858-1356983:1:exon
so has part: feature:1358724-1358786:1:exon
so has part: feature:1358879-1359061:1:exon
so has part: feature:1361238-1361363:1:exon
so has part: feature:1362290-1365391:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1223342-1223492:1:exon

position:1223492:1
position: 1223492
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1227758-1227871:1:exon

position:1227758:1
position: 1227758
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1227871:1
position: 1227871
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1244925-1244993:1:exon

position:1244925:1
position: 1244925
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1244993:1
position: 1244993
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1266170-1266252:1:exon

position:1266170:1
position: 1266170
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1266252:1
position: 1266252
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1277451-1277621:1:exon

position:1277451:1
position: 1277451
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1277621:1
position: 1277621
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1281425-1281522:1:exon

position:1281425:1
position: 1281425
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1281522:1
position: 1281522
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1282169-1282298:1:exon

position:1282169:1
position: 1282169
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1282298:1
position: 1282298
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1283567-1283719:1:exon

position:1283567:1
position: 1283567
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1283719:1
position: 1283719
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:1284865-1285007:1:exon

position:1284865:1
position: 1284865
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1285007:1
position: 1285007
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:1286407-1286534:1:exon

position:1286407:1
position: 1286407
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1286534:1
position: 1286534
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:1291559-1291622:1:exon

position:1291559:1
position: 1291559
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1291622:1
position: 1291622
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:1293765-1293869:1:exon

position:1293765:1
position: 1293765
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1293869:1
position: 1293869
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:1294630-1294785:1:exon

position:1294630:1
position: 1294630
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1294785:1
position: 1294785
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:1295680-1295781:1:exon

position:1295680:1
position: 1295680
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1295781:1
position: 1295781
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:1298598-1298674:1:exon

position:1298598:1
position: 1298598
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1298674:1
position: 1298674
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:1300268-1300448:1:exon

position:1300268:1
position: 1300268
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1300448:1
position: 1300448
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:1301990-1302103:1:exon

position:1301990:1
position: 1301990
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1302103:1
position: 1302103
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:1302769-1302877:1:exon

position:1302769:1
position: 1302769
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1302877:1
position: 1302877
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:1303559-1303767:1:exon

position:1303559:1
position: 1303559
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1303767:1
position: 1303767
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:1303899-1303997:1:exon

position:1303899:1
position: 1303899
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1303997:1
position: 1303997
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:1305471-1305638:1:exon

position:1305471:1
position: 1305471
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1305638:1
position: 1305638
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 22
SIO_000628: feature:1305770-1306064:1:exon

position:1305770:1
position: 1305770
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1306064:1
position: 1306064
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 23
SIO_000628: feature:1307401-1307567:1:exon

position:1307401:1
position: 1307401
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1307567:1
position: 1307567
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 24
SIO_000628: feature:1308626-1308754:1:exon

position:1308626:1
position: 1308626
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1308754:1
position: 1308754
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 25
SIO_000628: feature:1310160-1310273:1:exon

position:1310160:1
position: 1310160
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1310273:1
position: 1310273
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 26
SIO_000628: feature:1310576-1310689:1:exon

position:1310576:1
position: 1310576
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1310689:1
position: 1310689
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 27
SIO_000628: feature:1311988-1312122:1:exon

position:1311988:1
position: 1311988
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1312122:1
position: 1312122
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 28
SIO_000628: feature:1313037-1313165:1:exon

position:1313037:1
position: 1313037
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1313165:1
position: 1313165
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 29
SIO_000628: feature:1313781-1313883:1:exon

position:1313781:1
position: 1313781
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1313883:1
position: 1313883
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 30
SIO_000628: feature:1315439-1315647:1:exon

position:1315439:1
position: 1315439
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1315647:1
position: 1315647
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 31
SIO_000628: feature:1316455-1316574:1:exon

position:1316455:1
position: 1316455
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1316574:1
position: 1316574
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 32
SIO_000628: feature:1317425-1317622:1:exon

position:1317425:1
position: 1317425
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1317622:1
position: 1317622
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 33
SIO_000628: feature:1319649-1319788:1:exon

position:1319649:1
position: 1319649
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1319788:1
position: 1319788
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 34
SIO_000628: feature:1322464-1322557:1:exon

position:1322464:1
position: 1322464
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1322557:1
position: 1322557
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 35
SIO_000628: feature:1324080-1324169:1:exon

position:1324080:1
position: 1324080
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1324169:1
position: 1324169
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 36
SIO_000628: feature:1325299-1325421:1:exon

position:1325299:1
position: 1325299
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1325421:1
position: 1325421
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 37
SIO_000628: feature:1326640-1326783:1:exon

position:1326640:1
position: 1326640
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1326783:1
position: 1326783
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 38
SIO_000628: feature:1327052-1327213:1:exon

position:1327052:1
position: 1327052
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1327213:1
position: 1327213
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 39
SIO_000628: feature:1328308-1328448:1:exon

position:1328308:1
position: 1328308
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1328448:1
position: 1328448
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 40
SIO_000628: feature:1329551-1329732:1:exon

position:1329551:1
position: 1329551
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1329732:1
position: 1329732
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 41
SIO_000628: feature:1330154-1330286:1:exon

position:1330154:1
position: 1330154
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1330286:1
position: 1330286
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 42
SIO_000628: feature:1331723-1331824:1:exon

position:1331723:1
position: 1331723
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1331824:1
position: 1331824
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 43
SIO_000628: feature:1332581-1332751:1:exon

position:1332581:1
position: 1332581
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1332751:1
position: 1332751
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 44
SIO_000628: feature:1333353-1333499:1:exon

position:1333353:1
position: 1333353
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1333499:1
position: 1333499
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 45
SIO_000628: feature:1334332-1334433:1:exon

position:1334332:1
position: 1334332
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1334433:1
position: 1334433
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 46
SIO_000628: feature:1335768-1335887:1:exon

position:1335768:1
position: 1335768
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1335887:1
position: 1335887
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 47
SIO_000628: feature:1337391-1337537:1:exon

position:1337391:1
position: 1337391
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1337537:1
position: 1337537
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 48
SIO_000628: feature:1338280-1338446:1:exon

position:1338280:1
position: 1338280
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1338446:1
position: 1338446
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 49
SIO_000628: feature:1339163-1339346:1:exon

position:1339163:1
position: 1339163
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1339346:1
position: 1339346
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 50
SIO_000628: feature:1339974-1340099:1:exon

position:1339974:1
position: 1339974
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

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TLN2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 87175
gene: TLN2
product: talin 2, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 22 ESTs, 12 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XM_030955642.1
SIO_010081: TLN2
subclass of: SO_0000673
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TLN2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 87175
gene: TLN2
product: talin 2, transcript variant X5
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 22 ESTs, 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XM_030955646.1
SIO_010081: TLN2
subclass of: SO_0000673
so part of: TLN2
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TLN2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 87175
gene: TLN2
product: talin 2, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 22 ESTs, 12 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_030955644.1
SIO_010081: TLN2
subclass of: SO_0000673
so part of: TLN2
location: join(1223342..1223492,1227758..1227871,1277451..1277621,1281425..1281522,1282169..1282298,1283567..1283719,1284865..1285007,1286407..1286534,1291559..1291622,1293765..1293869,1294630..1294785,1295680..1295781,1298598..1298674,1300268..1300448,1301990..1302103,1302769..1302877,1303559..1303767,1303899..1303997,1305471..1305638,1305770..1306064,1307401..1307567,1308626..1308754,1310160..1310273,1310576..1310689,1311988..1312122,1313037..1313165,1313781..1313883,1315439..1315647,1316455..1316574,1317425..1317622,1319649..1319788,1322464..1322557,1324080..1324169,1325299..1325421,1326640..1326783,1327052..1327213,1328308..1328448,1329551..1329732,1330154..1330286,1331723..1331824,1332581..1332751,1333353..1333499,1334332..1334433,1335768..1335887,1337391..1337537,1338280..1338446,1339163..1339346,1339974..1340099,1340393..1340509,1342497..1342682,1346383..1346490,1348534..1348639,1350223..1350347,1356858..1356983,1358724..1358786,1358879..1359061,1361238..1361363,1362290..1365391)
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TLN2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 87175
gene: TLN2
product: talin 2, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 22 ESTs, 12 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_030955645.1
SIO_010081: TLN2
subclass of: SO_0000673
so part of: TLN2
location: join(1223342..1223492,1266170..1266252,1277451..1277621,1281425..1281522,1282169..1282298,1283567..1283719,1284865..1285007,1286407..1286534,1291559..1291622,1293765..1293869,1294630..1294785,1295680..1295781,1298598..1298674,1300268..1300448,1301990..1302103,1302769..1302877,1303559..1303767,1303899..1303997,1305471..1305638,1305770..1306064,1307401..1307567,1308626..1308754,1310160..1310273,1310576..1310689,1311988..1312122,1313037..1313165,1313781..1313883,1315439..1315647,1316455..1316574,1317425..1317622,1319649..1319788,1322464..1322557,1324080..1324169,1325299..1325421,1326640..1326783,1327052..1327213,1328308..1328448,1329551..1329732,1330154..1330286,1331723..1331824,1332581..1332751,1333353..1333499,1334332..1334433,1335768..1335887,1337391..1337537,1338280..1338446,1339163..1339346,1339974..1340099,1340393..1340509,1342497..1342682,1346383..1346490,1348534..1348639,1350223..1350347,1356858..1356983,1358724..1358786,1358879..1359061,1361238..1361363,1362290..1365391)
location: region:1223342-1365391:1
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SIO_000628: feature:1339163-1339346:1:exon

urn:…
SIO_000300: 48
SIO_000628: feature:1339974-1340099:1:exon

urn:…
SIO_000300: 49
SIO_000628: feature:1340393-1340509:1:exon

urn:…
SIO_000300: 50
SIO_000628: feature:1342497-1342682:1:exon

urn:…
SIO_000300: 51
SIO_000628: feature:1346383-1346490:1:exon

urn:…
SIO_000300: 52
SIO_000628: feature:1348534-1348639:1:exon

urn:…
SIO_000300: 53
SIO_000628: feature:1350223-1350347:1:exon

urn:…
SIO_000300: 54
SIO_000628: feature:1356858-1356983:1:exon

urn:…
SIO_000300: 55
SIO_000628: feature:1358724-1358786:1:exon

urn:…
SIO_000300: 56
SIO_000628: feature:1358879-1359061:1:exon

urn:…
SIO_000300: 57
SIO_000628: feature:1361238-1361363:1:exon

urn:…
SIO_000300: 58
SIO_000628: feature:1362290-1365391:1:exon

TLN2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 87175
gene: TLN2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: talin-2 isoform X1
translation: MVALSLKICVRQCNVVKTMQFEPSTAVNDACRVIRERVPEAQTGQASDYGLFLSDDDPRKGIWLEAGRTLDYYMLRNGDILEYKKKQRPQKIRMLDGSVKTVMVDDSKTVGELLVTICSRIGITNYEEYSLIQESIEEKKEESTGTLKKDRTLLRDERKMEKLKAKLHTDDDLNWLDHSRTFREQGVDENETLLLRRKFFYSDQNVDSRDPVQLNLLYVQARDDILNGSHPVSFEKACEFGGFQAQIQFGPHVEHKHKPGFLDLKEFLPKEYTKQRGAEKRIFQEHKNCGEMTEIEAKVKYVKLARSLRTYGVSFFLVKEKMKGKNKLVPRLLGVTKDSVMRVDEKTKEVLQEWPLTTVKRWAASPKSFTLDFGEYQESYYSVQTTEGEQISQLIAGYIDIILKKKQSKDRFGLEGDEESTMLEESVSPKKPTILQQQFNRTGKVEHGSVALPAVMRSGSSGPETFNVGIMPSPQQQVTTGQMHRGHMPPLTSAQQALMGTINSSMHAVQQAQADLSEVDNLPPLGQDMASRVWVQNKVDESKHEIHSQVDAITAGTASVVNLTAGDPVDTDYTAVGCAITTISSNLTEMSKGVKLLAALMDDEVGSGEDLLKAARTLASAVSDLLKAVQPTSGEPRQTVLTAAGSIGQASGELLRQIGENETDERFQDVLMSLAKAVANAAAMLVLKAKNVAQVAEDTVLQNRVIAAATQCALSTSQLVACAKVVSPTISSPVCQEQLIEAGKLVDRSVENCVRACQAATDDSELLKQVSAAASIVSQALHDLLQHVRQFASRGEPIGRYDQATDTIMCVTESIFSSMGDAGEMVRQARVLAQATSDLVNAMRSDAEAEIDMENSKKLLAAAKLLADSTARMVEAAKGAAANPENEDQQQRLREAAEGLRVATNAAAQNAIKKKIVNRLEIAAKQAAAAATQTIAASQNAAVSNKNTAAHQQLVQSCKTVADHIPQLVQGVRGSQAQAEDLSAQLALINSSQNFLQPGSKMVASAKAAVPTVTDQAAAMQLSQCAKNLATSLAELRTASQKAHEACGPMEIDSALNTVQTLKNELQDAKMAAVDGQLKPLPGETLEKCTQDLGSTSKAVGSSMAQLLTCAAQGNEHYTGVAARETAQALKTLAQAARGVAASTSDPVAAHAMLDSARDVMEGSAMLIQEAKQALAAPGDADSQQRLAQVAKAVSHSLNNCVNCLPGQKDVDVALKSIGESSKKLLVDSLPPSSKSFQEAQSELNQAAADLNQSAGEVVHATRGQSGELAAASGKFSDDFDEFLDAGIEMAGQAQTKEDQIQVIGNLKSISMASSKLLLAAKSLSVDPGAPNAKNLLAAAARAVTESINQLITLCTQQAPGQKECDNALRELETVKGMLDNPNEPVSDLSYFDCIEGVMENSKVLGESMAGISQNAKTGDLLVFGECVGVASKALCGLTEAAAQAAYLVGISDPNSQAGQQGLVDPIQFARANQAIQMACQNLVDPASSPSQVLSAATIVAKHTSALCNACRIASSKTANPVAKRHFVQSAKEVANSTANLVKTIKALDGDFSEENRNKCRTATAPLIEAVENLTAFASNPEFVSIPAQISTEGSQAQEPILVSARTMLESSSLLIKTARSLAINPKDPPTWSVLAGHSHTVSDSIKSLITSIRDKAPGQRECDFSIDGINRCIRDIEQASLAAVSQSLATRDDISVEALQEQLTSVVQEIGHLIDPIATAARGEAAQLGHKVTQLASYFEPLVSAAVGVASKTLNHQQQMTVLDQSKTLAESALQILYAAKEGGGNPKASHTHDAITEAAQLMKEAVDDIMVTLNEAASEVGMVGGMVDSIAEAMTKLDEGTPPDPKGTFVDYQTTVVKYSKAIAVTAQEMMTKSVTNPEELGGLASQMTNDYGHLALQGRMAAATAEPEEIGFQIRTRVQELGHGCIFLVQKAGALQICPTDSYTKRELIECARAVTEKVSLVLSALQAGNKGTQACITAASAVSGIIADLDTTIMFA…
SIO_010081: TLN2
subclass of: SO_0000673
so part of: TLN2
location: join(1277486..1277621,1281425..1281522,1282169..1282298,1283567..1283719,1284865..1285007,1286407..1286534,1291559..1291622,1293765..1293869,1294630..1294785,1295680..1295781,1298598..1298674,1300268..1300448,1301990..1302103,1302769..1302877,1303559..1303767,1303899..1303997,1305471..1305638,1305770..1306064,1307401..1307567,1308626..1308754,1310160..1310273,1310576..1310689,1311988..1312122,1313037..1313165,1313781..1313883,1315439..1315647,1316455..1316574,1317425..1317622,1319649..1319788,1322464..1322557,1324080..1324169,1325299..1325421,1326640..1326783,1327052..1327213,1328308..1328448,1329551..1329732,1330154..1330286,1331723..1331824,1332581..1332751,1333353..1333499,1334332..1334433,1335768..1335887,1337391..1337537,1338280..1338446,1339163..1339346,1339974..1340099,1340393..1340509,1342497..1342682,1346383..1346490,1348534..1348639,1350223..1350347,1356858..1356983,1358724..1358786,1358879..1359061,1361238..1361363,1362290..1362418)
location: region:1277486-1362418:1
so has part: feature:1277486-1277621:1:exon
so has part: feature:1281425-1281522:1:exon
so has part: feature:1282169-1282298:1:exon
so has part: feature:1283567-1283719:1:exon
so has part: feature:1284865-1285007:1:exon
so has part: feature:1286407-1286534:1:exon
so has part: feature:1291559-1291622:1:exon
so has part: feature:1293765-1293869:1:exon
so has part: feature:1294630-1294785:1:exon
so has part: feature:1295680-1295781:1:exon
so has part: feature:1298598-1298674:1:exon
so has part: feature:1300268-1300448:1:exon
so has part: feature:1301990-1302103:1:exon
so has part: feature:1302769-1302877:1:exon
so has part: feature:1303559-1303767:1:exon
so has part: feature:1303899-1303997:1:exon
so has part: feature:1305471-1305638:1:exon
so has part: feature:1305770-1306064:1:exon
so has part: feature:1307401-1307567:1:exon
so has part: feature:1308626-1308754:1:exon
so has part: feature:1310160-1310273:1:exon
so has part: feature:1310576-1310689:1:exon
so has part: feature:1311988-1312122:1:exon
so has part: feature:1313037-1313165:1:exon
so has part: feature:1313781-1313883:1:exon
so has part: feature:1315439-1315647:1:exon
so has part: feature:1316455-1316574:1:exon
so has part: feature:1317425-1317622:1:exon
so has part: feature:1319649-1319788:1:exon
so has part: feature:1322464-1322557:1:exon
so has part: feature:1324080-1324169:1:exon
so has part: feature:1325299-1325421:1:exon
so has part: feature:1326640-1326783:1:exon
so has part: feature:1327052-1327213:1:exon
so has part: feature:1328308-1328448:1:exon
so has part: feature:1329551-1329732:1:exon
so has part: feature:1330154-1330286:1:exon
so has part: feature:1331723-1331824:1:exon
so has part: feature:1332581-1332751:1:exon
so has part: feature:1333353-1333499:1:exon
so has part: feature:1334332-1334433:1:exon
so has part: feature:1335768-1335887:1:exon
so has part: feature:1337391-1337537:1:exon
so has part: feature:1338280-1338446:1:exon
so has part: feature:1339163-1339346:1:exon
so has part: feature:1339974-1340099:1:exon
so has part: feature:1340393-1340509:1:exon
so has part: feature:1342497-1342682:1:exon
so has part: feature:1346383-1346490:1:exon
so has part: feature:1348534-1348639:1:exon
so has part: feature:1350223-1350347:1:exon
so has part: feature:1356858-1356983:1:exon
so has part: feature:1358724-1358786:1:exon
so has part: feature:1358879-1359061:1:exon
so has part: feature:1361238-1361363:1:exon
so has part: feature:1362290-1362418:1:exon

XP_030811502.1
type: Protein
SIO_000068: ncbiprotein

position:1277486:1
position: 1277486
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1362418:1
position: 1362418
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1277486-1277621:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1281425-1281522:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1282169-1282298:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1283567-1283719:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1284865-1285007:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1286407-1286534:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1291559-1291622:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1293765-1293869:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1294630-1294785:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1295680-1295781:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1298598-1298674:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1300268-1300448:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1301990-1302103:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1302769-1302877:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1303559-1303767:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1303899-1303997:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1305471-1305638:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:1305770-1306064:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:1307401-1307567:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:1308626-1308754:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:1310160-1310273:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:1310576-1310689:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:1311988-1312122:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:1313037-1313165:1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:1313781-1313883:1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:1315439-1315647:1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:1316455-1316574:1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:1317425-1317622:1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:1319649-1319788:1:exon

urn:…
SIO_000300: 30
SIO_000628: feature:1322464-1322557:1:exon

urn:…
SIO_000300: 31
SIO_000628: feature:1324080-1324169:1:exon

urn:…
SIO_000300: 32
SIO_000628: feature:1325299-1325421:1:exon

urn:…
SIO_000300: 33
SIO_000628: feature:1326640-1326783:1:exon

urn:…
SIO_000300: 34
SIO_000628: feature:1327052-1327213:1:exon

urn:…
SIO_000300: 35
SIO_000628: feature:1328308-1328448:1:exon

urn:…
SIO_000300: 36
SIO_000628: feature:1329551-1329732:1:exon

urn:…
SIO_000300: 37
SIO_000628: feature:1330154-1330286:1:exon

urn:…
SIO_000300: 38
SIO_000628: feature:1331723-1331824:1:exon

urn:…
SIO_000300: 39
SIO_000628: feature:1332581-1332751:1:exon

urn:…
SIO_000300: 40
SIO_000628: feature:1333353-1333499:1:exon

urn:…
SIO_000300: 41
SIO_000628: feature:1334332-1334433:1:exon

urn:…
SIO_000300: 42
SIO_000628: feature:1335768-1335887:1:exon

urn:…
SIO_000300: 43
SIO_000628: feature:1337391-1337537:1:exon

urn:…
SIO_000300: 44
SIO_000628: feature:1338280-1338446:1:exon

urn:…
SIO_000300: 45
SIO_000628: feature:1339163-1339346:1:exon

urn:…
SIO_000300: 46
SIO_000628: feature:1339974-1340099:1:exon

urn:…
SIO_000300: 47
SIO_000628: feature:1340393-1340509:1:exon

urn:…
SIO_000300: 48
SIO_000628: feature:1342497-1342682:1:exon

urn:…
SIO_000300: 49
SIO_000628: feature:1346383-1346490:1:exon

urn:…
SIO_000300: 50
SIO_000628: feature:1348534-1348639:1:exon

urn:…
SIO_000300: 51
SIO_000628: feature:1350223-1350347:1:exon

urn:…
SIO_000300: 52
SIO_000628: feature:1356858-1356983:1:exon

urn:…
SIO_000300: 53
SIO_000628: feature:1358724-1358786:1:exon

urn:…
SIO_000300: 54
SIO_000628: feature:1358879-1359061:1:exon

urn:…
SIO_000300: 55
SIO_000628: feature:1361238-1361363:1:exon

urn:…
SIO_000300: 56
SIO_000628: feature:1362290-1362418:1:exon

TLN2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 87175
gene: TLN2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: talin-2 isoform X1
translation: MVALSLKICVRQCNVVKTMQFEPSTAVNDACRVIRERVPEAQTGQASDYGLFLSDDDPRKGIWLEAGRTLDYYMLRNGDILEYKKKQRPQKIRMLDGSVKTVMVDDSKTVGELLVTICSRIGITNYEEYSLIQESIEEKKEESTGTLKKDRTLLRDERKMEKLKAKLHTDDDLNWLDHSRTFREQGVDENETLLLRRKFFYSDQNVDSRDPVQLNLLYVQARDDILNGSHPVSFEKACEFGGFQAQIQFGPHVEHKHKPGFLDLKEFLPKEYTKQRGAEKRIFQEHKNCGEMTEIEAKVKYVKLARSLRTYGVSFFLVKEKMKGKNKLVPRLLGVTKDSVMRVDEKTKEVLQEWPLTTVKRWAASPKSFTLDFGEYQESYYSVQTTEGEQISQLIAGYIDIILKKKQSKDRFGLEGDEESTMLEESVSPKKPTILQQQFNRTGKVEHGSVALPAVMRSGSSGPETFNVGIMPSPQQQVTTGQMHRGHMPPLTSAQQALMGTINSSMHAVQQAQADLSEVDNLPPLGQDMASRVWVQNKVDESKHEIHSQVDAITAGTASVVNLTAGDPVDTDYTAVGCAITTISSNLTEMSKGVKLLAALMDDEVGSGEDLLKAARTLASAVSDLLKAVQPTSGEPRQTVLTAAGSIGQASGELLRQIGENETDERFQDVLMSLAKAVANAAAMLVLKAKNVAQVAEDTVLQNRVIAAATQCALSTSQLVACAKVVSPTISSPVCQEQLIEAGKLVDRSVENCVRACQAATDDSELLKQVSAAASIVSQALHDLLQHVRQFASRGEPIGRYDQATDTIMCVTESIFSSMGDAGEMVRQARVLAQATSDLVNAMRSDAEAEIDMENSKKLLAAAKLLADSTARMVEAAKGAAANPENEDQQQRLREAAEGLRVATNAAAQNAIKKKIVNRLEIAAKQAAAAATQTIAASQNAAVSNKNTAAHQQLVQSCKTVADHIPQLVQGVRGSQAQAEDLSAQLALINSSQNFLQPGSKMVASAKAAVPTVTDQAAAMQLSQCAKNLATSLAELRTASQKAHEACGPMEIDSALNTVQTLKNELQDAKMAAVDGQLKPLPGETLEKCTQDLGSTSKAVGSSMAQLLTCAAQGNEHYTGVAARETAQALKTLAQAARGVAASTSDPVAAHAMLDSARDVMEGSAMLIQEAKQALAAPGDADSQQRLAQVAKAVSHSLNNCVNCLPGQKDVDVALKSIGESSKKLLVDSLPPSSKSFQEAQSELNQAAADLNQSAGEVVHATRGQSGELAAASGKFSDDFDEFLDAGIEMAGQAQTKEDQIQVIGNLKSISMASSKLLLAAKSLSVDPGAPNAKNLLAAAARAVTESINQLITLCTQQAPGQKECDNALRELETVKGMLDNPNEPVSDLSYFDCIEGVMENSKVLGESMAGISQNAKTGDLLVFGECVGVASKALCGLTEAAAQAAYLVGISDPNSQAGQQGLVDPIQFARANQAIQMACQNLVDPASSPSQVLSAATIVAKHTSALCNACRIASSKTANPVAKRHFVQSAKEVANSTANLVKTIKALDGDFSEENRNKCRTATAPLIEAVENLTAFASNPEFVSIPAQISTEGSQAQEPILVSARTMLESSSLLIKTARSLAINPKDPPTWSVLAGHSHTVSDSIKSLITSIRDKAPGQRECDFSIDGINRCIRDIEQASLAAVSQSLATRDDISVEALQEQLTSVVQEIGHLIDPIATAARGEAAQLGHKVTQLASYFEPLVSAAVGVASKTLNHQQQMTVLDQSKTLAESALQILYAAKEGGGNPKASHTHDAITEAAQLMKEAVDDIMVTLNEAASEVGMVGGMVDSIAEAMTKLDEGTPPDPKGTFVDYQTTVVKYSKAIAVTAQEMMTKSVTNPEELGGLASQMTNDYGHLALQGRMAAATAEPEEIGFQIRTRVQELGHGCIFLVQKAGALQICPTDSYTKRELIECARAVTEKVSLVLSALQAGNKGTQACITAASAVSGIIADLDTTIMFA…
SIO_010081: TLN2
subclass of: SO_0000673
so part of: TLN2
location: join(1277486..1277621,1281425..1281522,1282169..1282298,1283567..1283719,1284865..1285007,1286407..1286534,1291559..1291622,1293765..1293869,1294630..1294785,1295680..1295781,1298598..1298674,1300268..1300448,1301990..1302103,1302769..1302877,1303559..1303767,1303899..1303997,1305471..1305638,1305770..1306064,1307401..1307567,1308626..1308754,1310160..1310273,1310576..1310689,1311988..1312122,1313037..1313165,1313781..1313883,1315439..1315647,1316455..1316574,1317425..1317622,1319649..1319788,1322464..1322557,1324080..1324169,1325299..1325421,1326640..1326783,1327052..1327213,1328308..1328448,1329551..1329732,1330154..1330286,1331723..1331824,1332581..1332751,1333353..1333499,1334332..1334433,1335768..1335887,1337391..1337537,1338280..1338446,1339163..1339346,1339974..1340099,1340393..1340509,1342497..1342682,1346383..1346490,1348534..1348639,1350223..1350347,1356858..1356983,1358724..1358786,1358879..1359061,1361238..1361363,1362290..1362418)
location: region:1277486-1362418:1
so has part: feature:1277486-1277621:1:exon
so has part: feature:1281425-1281522:1:exon
so has part: feature:1282169-1282298:1:exon
so has part: feature:1283567-1283719:1:exon
so has part: feature:1284865-1285007:1:exon
so has part: feature:1286407-1286534:1:exon
so has part: feature:1291559-1291622:1:exon
so has part: feature:1293765-1293869:1:exon
so has part: feature:1294630-1294785:1:exon
so has part: feature:1295680-1295781:1:exon
so has part: feature:1298598-1298674:1:exon
so has part: feature:1300268-1300448:1:exon
so has part: feature:1301990-1302103:1:exon
so has part: feature:1302769-1302877:1:exon
so has part: feature:1303559-1303767:1:exon
so has part: feature:1303899-1303997:1:exon
so has part: feature:1305471-1305638:1:exon
so has part: feature:1305770-1306064:1:exon
so has part: feature:1307401-1307567:1:exon
so has part: feature:1308626-1308754:1:exon
so has part: feature:1310160-1310273:1:exon
so has part: feature:1310576-1310689:1:exon
so has part: feature:1311988-1312122:1:exon
so has part: feature:1313037-1313165:1:exon
so has part: feature:1313781-1313883:1:exon
so has part: feature:1315439-1315647:1:exon
so has part: feature:1316455-1316574:1:exon
so has part: feature:1317425-1317622:1:exon
so has part: feature:1319649-1319788:1:exon
so has part: feature:1322464-1322557:1:exon
so has part: feature:1324080-1324169:1:exon
so has part: feature:1325299-1325421:1:exon
so has part: feature:1326640-1326783:1:exon
so has part: feature:1327052-1327213:1:exon
so has part: feature:1328308-1328448:1:exon
so has part: feature:1329551-1329732:1:exon
so has part: feature:1330154-1330286:1:exon
so has part: feature:1331723-1331824:1:exon
so has part: feature:1332581-1332751:1:exon
so has part: feature:1333353-1333499:1:exon
so has part: feature:1334332-1334433:1:exon
so has part: feature:1335768-1335887:1:exon
so has part: feature:1337391-1337537:1:exon
so has part: feature:1338280-1338446:1:exon
so has part: feature:1339163-1339346:1:exon
so has part: feature:1339974-1340099:1:exon
so has part: feature:1340393-1340509:1:exon
so has part: feature:1342497-1342682:1:exon
so has part: feature:1346383-1346490:1:exon
so has part: feature:1348534-1348639:1:exon
so has part: feature:1350223-1350347:1:exon
so has part: feature:1356858-1356983:1:exon
so has part: feature:1358724-1358786:1:exon
so has part: feature:1358879-1359061:1:exon
so has part: feature:1361238-1361363:1:exon
so has part: feature:1362290-1362418:1:exon

XP_030811503.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1277486-1277621:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1281425-1281522:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1282169-1282298:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1283567-1283719:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1284865-1285007:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1286407-1286534:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1291559-1291622:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1293765-1293869:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1294630-1294785:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1295680-1295781:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1298598-1298674:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1300268-1300448:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1301990-1302103:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1302769-1302877:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1303559-1303767:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1303899-1303997:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1305471-1305638:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:1305770-1306064:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:1307401-1307567:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:1308626-1308754:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:1310160-1310273:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:1310576-1310689:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:1311988-1312122:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:1313037-1313165:1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:1313781-1313883:1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:1315439-1315647:1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:1316455-1316574:1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:1317425-1317622:1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:1319649-1319788:1:exon

urn:…
SIO_000300: 30
SIO_000628: feature:1322464-1322557:1:exon

urn:…
SIO_000300: 31
SIO_000628: feature:1324080-1324169:1:exon

urn:…
SIO_000300: 32
SIO_000628: feature:1325299-1325421:1:exon

urn:…
SIO_000300: 33
SIO_000628: feature:1326640-1326783:1:exon

urn:…
SIO_000300: 34
SIO_000628: feature:1327052-1327213:1:exon

urn:…
SIO_000300: 35
SIO_000628: feature:1328308-1328448:1:exon

urn:…
SIO_000300: 36
SIO_000628: feature:1329551-1329732:1:exon

urn:…
SIO_000300: 37
SIO_000628: feature:1330154-1330286:1:exon

urn:…
SIO_000300: 38
SIO_000628: feature:1331723-1331824:1:exon

urn:…
SIO_000300: 39
SIO_000628: feature:1332581-1332751:1:exon

urn:…
SIO_000300: 40
SIO_000628: feature:1333353-1333499:1:exon

urn:…
SIO_000300: 41
SIO_000628: feature:1334332-1334433:1:exon

urn:…
SIO_000300: 42
SIO_000628: feature:1335768-1335887:1:exon

urn:…
SIO_000300: 43
SIO_000628: feature:1337391-1337537:1:exon

urn:…
SIO_000300: 44
SIO_000628: feature:1338280-1338446:1:exon

urn:…
SIO_000300: 45
SIO_000628: feature:1339163-1339346:1:exon

urn:…
SIO_000300: 46
SIO_000628: feature:1339974-1340099:1:exon

urn:…
SIO_000300: 47
SIO_000628: feature:1340393-1340509:1:exon

urn:…
SIO_000300: 48
SIO_000628: feature:1342497-1342682:1:exon

urn:…
SIO_000300: 49
SIO_000628: feature:1346383-1346490:1:exon

urn:…
SIO_000300: 50
SIO_000628: feature:1348534-1348639:1:exon

urn:…
SIO_000300: 51
SIO_000628: feature:1350223-1350347:1:exon

urn:…
SIO_000300: 52
SIO_000628: feature:1356858-1356983:1:exon

urn:…
SIO_000300: 53
SIO_000628: feature:1358724-1358786:1:exon

urn:…
SIO_000300: 54
SIO_000628: feature:1358879-1359061:1:exon

urn:…
SIO_000300: 55
SIO_000628: feature:1361238-1361363:1:exon

urn:…
SIO_000300: 56
SIO_000628: feature:1362290-1362418:1:exon

TLN2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 87175
gene: TLN2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: talin-2 isoform X1
translation: MVALSLKICVRQCNVVKTMQFEPSTAVNDACRVIRERVPEAQTGQASDYGLFLSDDDPRKGIWLEAGRTLDYYMLRNGDILEYKKKQRPQKIRMLDGSVKTVMVDDSKTVGELLVTICSRIGITNYEEYSLIQESIEEKKEESTGTLKKDRTLLRDERKMEKLKAKLHTDDDLNWLDHSRTFREQGVDENETLLLRRKFFYSDQNVDSRDPVQLNLLYVQARDDILNGSHPVSFEKACEFGGFQAQIQFGPHVEHKHKPGFLDLKEFLPKEYTKQRGAEKRIFQEHKNCGEMTEIEAKVKYVKLARSLRTYGVSFFLVKEKMKGKNKLVPRLLGVTKDSVMRVDEKTKEVLQEWPLTTVKRWAASPKSFTLDFGEYQESYYSVQTTEGEQISQLIAGYIDIILKKKQSKDRFGLEGDEESTMLEESVSPKKPTILQQQFNRTGKVEHGSVALPAVMRSGSSGPETFNVGIMPSPQQQVTTGQMHRGHMPPLTSAQQALMGTINSSMHAVQQAQADLSEVDNLPPLGQDMASRVWVQNKVDESKHEIHSQVDAITAGTASVVNLTAGDPVDTDYTAVGCAITTISSNLTEMSKGVKLLAALMDDEVGSGEDLLKAARTLASAVSDLLKAVQPTSGEPRQTVLTAAGSIGQASGELLRQIGENETDERFQDVLMSLAKAVANAAAMLVLKAKNVAQVAEDTVLQNRVIAAATQCALSTSQLVACAKVVSPTISSPVCQEQLIEAGKLVDRSVENCVRACQAATDDSELLKQVSAAASIVSQALHDLLQHVRQFASRGEPIGRYDQATDTIMCVTESIFSSMGDAGEMVRQARVLAQATSDLVNAMRSDAEAEIDMENSKKLLAAAKLLADSTARMVEAAKGAAANPENEDQQQRLREAAEGLRVATNAAAQNAIKKKIVNRLEIAAKQAAAAATQTIAASQNAAVSNKNTAAHQQLVQSCKTVADHIPQLVQGVRGSQAQAEDLSAQLALINSSQNFLQPGSKMVASAKAAVPTVTDQAAAMQLSQCAKNLATSLAELRTASQKAHEACGPMEIDSALNTVQTLKNELQDAKMAAVDGQLKPLPGETLEKCTQDLGSTSKAVGSSMAQLLTCAAQGNEHYTGVAARETAQALKTLAQAARGVAASTSDPVAAHAMLDSARDVMEGSAMLIQEAKQALAAPGDADSQQRLAQVAKAVSHSLNNCVNCLPGQKDVDVALKSIGESSKKLLVDSLPPSSKSFQEAQSELNQAAADLNQSAGEVVHATRGQSGELAAASGKFSDDFDEFLDAGIEMAGQAQTKEDQIQVIGNLKSISMASSKLLLAAKSLSVDPGAPNAKNLLAAAARAVTESINQLITLCTQQAPGQKECDNALRELETVKGMLDNPNEPVSDLSYFDCIEGVMENSKVLGESMAGISQNAKTGDLLVFGECVGVASKALCGLTEAAAQAAYLVGISDPNSQAGQQGLVDPIQFARANQAIQMACQNLVDPASSPSQVLSAATIVAKHTSALCNACRIASSKTANPVAKRHFVQSAKEVANSTANLVKTIKALDGDFSEENRNKCRTATAPLIEAVENLTAFASNPEFVSIPAQISTEGSQAQEPILVSARTMLESSSLLIKTARSLAINPKDPPTWSVLAGHSHTVSDSIKSLITSIRDKAPGQRECDFSIDGINRCIRDIEQASLAAVSQSLATRDDISVEALQEQLTSVVQEIGHLIDPIATAARGEAAQLGHKVTQLASYFEPLVSAAVGVASKTLNHQQQMTVLDQSKTLAESALQILYAAKEGGGNPKASHTHDAITEAAQLMKEAVDDIMVTLNEAASEVGMVGGMVDSIAEAMTKLDEGTPPDPKGTFVDYQTTVVKYSKAIAVTAQEMMTKSVTNPEELGGLASQMTNDYGHLALQGRMAAATAEPEEIGFQIRTRVQELGHGCIFLVQKAGALQICPTDSYTKRELIECARAVTEKVSLVLSALQAGNKGTQACITAASAVSGIIADLDTTIMFA…
SIO_010081: TLN2
subclass of: SO_0000673
so part of: TLN2
location: join(1277486..1277621,1281425..1281522,1282169..1282298,1283567..1283719,1284865..1285007,1286407..1286534,1291559..1291622,1293765..1293869,1294630..1294785,1295680..1295781,1298598..1298674,1300268..1300448,1301990..1302103,1302769..1302877,1303559..1303767,1303899..1303997,1305471..1305638,1305770..1306064,1307401..1307567,1308626..1308754,1310160..1310273,1310576..1310689,1311988..1312122,1313037..1313165,1313781..1313883,1315439..1315647,1316455..1316574,1317425..1317622,1319649..1319788,1322464..1322557,1324080..1324169,1325299..1325421,1326640..1326783,1327052..1327213,1328308..1328448,1329551..1329732,1330154..1330286,1331723..1331824,1332581..1332751,1333353..1333499,1334332..1334433,1335768..1335887,1337391..1337537,1338280..1338446,1339163..1339346,1339974..1340099,1340393..1340509,1342497..1342682,1346383..1346490,1348534..1348639,1350223..1350347,1356858..1356983,1358724..1358786,1358879..1359061,1361238..1361363,1362290..1362418)
location: region:1277486-1362418:1
so has part: feature:1277486-1277621:1:exon
so has part: feature:1281425-1281522:1:exon
so has part: feature:1282169-1282298:1:exon
so has part: feature:1283567-1283719:1:exon
so has part: feature:1284865-1285007:1:exon
so has part: feature:1286407-1286534:1:exon
so has part: feature:1291559-1291622:1:exon
so has part: feature:1293765-1293869:1:exon
so has part: feature:1294630-1294785:1:exon
so has part: feature:1295680-1295781:1:exon
so has part: feature:1298598-1298674:1:exon
so has part: feature:1300268-1300448:1:exon
so has part: feature:1301990-1302103:1:exon
so has part: feature:1302769-1302877:1:exon
so has part: feature:1303559-1303767:1:exon
so has part: feature:1303899-1303997:1:exon
so has part: feature:1305471-1305638:1:exon
so has part: feature:1305770-1306064:1:exon
so has part: feature:1307401-1307567:1:exon
so has part: feature:1308626-1308754:1:exon
so has part: feature:1310160-1310273:1:exon
so has part: feature:1310576-1310689:1:exon
so has part: feature:1311988-1312122:1:exon
so has part: feature:1313037-1313165:1:exon
so has part: feature:1313781-1313883:1:exon
so has part: feature:1315439-1315647:1:exon
so has part: feature:1316455-1316574:1:exon
so has part: feature:1317425-1317622:1:exon
so has part: feature:1319649-1319788:1:exon
so has part: feature:1322464-1322557:1:exon
so has part: feature:1324080-1324169:1:exon
so has part: feature:1325299-1325421:1:exon
so has part: feature:1326640-1326783:1:exon
so has part: feature:1327052-1327213:1:exon
so has part: feature:1328308-1328448:1:exon
so has part: feature:1329551-1329732:1:exon
so has part: feature:1330154-1330286:1:exon
so has part: feature:1331723-1331824:1:exon
so has part: feature:1332581-1332751:1:exon
so has part: feature:1333353-1333499:1:exon
so has part: feature:1334332-1334433:1:exon
so has part: feature:1335768-1335887:1:exon
so has part: feature:1337391-1337537:1:exon
so has part: feature:1338280-1338446:1:exon
so has part: feature:1339163-1339346:1:exon
so has part: feature:1339974-1340099:1:exon
so has part: feature:1340393-1340509:1:exon
so has part: feature:1342497-1342682:1:exon
so has part: feature:1346383-1346490:1:exon
so has part: feature:1348534-1348639:1:exon
so has part: feature:1350223-1350347:1:exon
so has part: feature:1356858-1356983:1:exon
so has part: feature:1358724-1358786:1:exon
so has part: feature:1358879-1359061:1:exon
so has part: feature:1361238-1361363:1:exon
so has part: feature:1362290-1362418:1:exon

XP_030811504.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1277486-1277621:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1281425-1281522:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1282169-1282298:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1283567-1283719:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1284865-1285007:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1286407-1286534:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1291559-1291622:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1293765-1293869:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1294630-1294785:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1295680-1295781:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1298598-1298674:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1300268-1300448:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1301990-1302103:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1302769-1302877:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1303559-1303767:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1303899-1303997:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1305471-1305638:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:1305770-1306064:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:1307401-1307567:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:1308626-1308754:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:1310160-1310273:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:1310576-1310689:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:1311988-1312122:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:1313037-1313165:1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:1313781-1313883:1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:1315439-1315647:1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:1316455-1316574:1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:1317425-1317622:1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:1319649-1319788:1:exon

urn:…
SIO_000300: 30
SIO_000628: feature:1322464-1322557:1:exon

urn:…
SIO_000300: 31
SIO_000628: feature:1324080-1324169:1:exon

urn:…
SIO_000300: 32
SIO_000628: feature:1325299-1325421:1:exon

urn:…
SIO_000300: 33
SIO_000628: feature:1326640-1326783:1:exon

urn:…
SIO_000300: 34
SIO_000628: feature:1327052-1327213:1:exon

urn:…
SIO_000300: 35
SIO_000628: feature:1328308-1328448:1:exon

urn:…
SIO_000300: 36
SIO_000628: feature:1329551-1329732:1:exon

urn:…
SIO_000300: 37
SIO_000628: feature:1330154-1330286:1:exon

urn:…
SIO_000300: 38
SIO_000628: feature:1331723-1331824:1:exon

urn:…
SIO_000300: 39
SIO_000628: feature:1332581-1332751:1:exon

urn:…
SIO_000300: 40
SIO_000628: feature:1333353-1333499:1:exon

urn:…
SIO_000300: 41
SIO_000628: feature:1334332-1334433:1:exon

urn:…
SIO_000300: 42
SIO_000628: feature:1335768-1335887:1:exon

urn:…
SIO_000300: 43
SIO_000628: feature:1337391-1337537:1:exon

urn:…
SIO_000300: 44
SIO_000628: feature:1338280-1338446:1:exon

urn:…
SIO_000300: 45
SIO_000628: feature:1339163-1339346:1:exon

urn:…
SIO_000300: 46
SIO_000628: feature:1339974-1340099:1:exon

urn:…
SIO_000300: 47
SIO_000628: feature:1340393-1340509:1:exon

urn:…
SIO_000300: 48
SIO_000628: feature:1342497-1342682:1:exon

urn:…
SIO_000300: 49
SIO_000628: feature:1346383-1346490:1:exon

urn:…
SIO_000300: 50
SIO_000628: feature:1348534-1348639:1:exon

urn:…
SIO_000300: 51
SIO_000628: feature:1350223-1350347:1:exon

urn:…
SIO_000300: 52
SIO_000628: feature:1356858-1356983:1:exon

urn:…
SIO_000300: 53
SIO_000628: feature:1358724-1358786:1:exon

urn:…
SIO_000300: 54
SIO_000628: feature:1358879-1359061:1:exon

urn:…
SIO_000300: 55
SIO_000628: feature:1361238-1361363:1:exon

urn:…
SIO_000300: 56
SIO_000628: feature:1362290-1362418:1:exon

TLN2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 87175
gene: TLN2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: talin-2 isoform X1
translation: MVALSLKICVRQCNVVKTMQFEPSTAVNDACRVIRERVPEAQTGQASDYGLFLSDDDPRKGIWLEAGRTLDYYMLRNGDILEYKKKQRPQKIRMLDGSVKTVMVDDSKTVGELLVTICSRIGITNYEEYSLIQESIEEKKEESTGTLKKDRTLLRDERKMEKLKAKLHTDDDLNWLDHSRTFREQGVDENETLLLRRKFFYSDQNVDSRDPVQLNLLYVQARDDILNGSHPVSFEKACEFGGFQAQIQFGPHVEHKHKPGFLDLKEFLPKEYTKQRGAEKRIFQEHKNCGEMTEIEAKVKYVKLARSLRTYGVSFFLVKEKMKGKNKLVPRLLGVTKDSVMRVDEKTKEVLQEWPLTTVKRWAASPKSFTLDFGEYQESYYSVQTTEGEQISQLIAGYIDIILKKKQSKDRFGLEGDEESTMLEESVSPKKPTILQQQFNRTGKVEHGSVALPAVMRSGSSGPETFNVGIMPSPQQQVTTGQMHRGHMPPLTSAQQALMGTINSSMHAVQQAQADLSEVDNLPPLGQDMASRVWVQNKVDESKHEIHSQVDAITAGTASVVNLTAGDPVDTDYTAVGCAITTISSNLTEMSKGVKLLAALMDDEVGSGEDLLKAARTLASAVSDLLKAVQPTSGEPRQTVLTAAGSIGQASGELLRQIGENETDERFQDVLMSLAKAVANAAAMLVLKAKNVAQVAEDTVLQNRVIAAATQCALSTSQLVACAKVVSPTISSPVCQEQLIEAGKLVDRSVENCVRACQAATDDSELLKQVSAAASIVSQALHDLLQHVRQFASRGEPIGRYDQATDTIMCVTESIFSSMGDAGEMVRQARVLAQATSDLVNAMRSDAEAEIDMENSKKLLAAAKLLADSTARMVEAAKGAAANPENEDQQQRLREAAEGLRVATNAAAQNAIKKKIVNRLEIAAKQAAAAATQTIAASQNAAVSNKNTAAHQQLVQSCKTVADHIPQLVQGVRGSQAQAEDLSAQLALINSSQNFLQPGSKMVASAKAAVPTVTDQAAAMQLSQCAKNLATSLAELRTASQKAHEACGPMEIDSALNTVQTLKNELQDAKMAAVDGQLKPLPGETLEKCTQDLGSTSKAVGSSMAQLLTCAAQGNEHYTGVAARETAQALKTLAQAARGVAASTSDPVAAHAMLDSARDVMEGSAMLIQEAKQALAAPGDADSQQRLAQVAKAVSHSLNNCVNCLPGQKDVDVALKSIGESSKKLLVDSLPPSSKSFQEAQSELNQAAADLNQSAGEVVHATRGQSGELAAASGKFSDDFDEFLDAGIEMAGQAQTKEDQIQVIGNLKSISMASSKLLLAAKSLSVDPGAPNAKNLLAAAARAVTESINQLITLCTQQAPGQKECDNALRELETVKGMLDNPNEPVSDLSYFDCIEGVMENSKVLGESMAGISQNAKTGDLLVFGECVGVASKALCGLTEAAAQAAYLVGISDPNSQAGQQGLVDPIQFARANQAIQMACQNLVDPASSPSQVLSAATIVAKHTSALCNACRIASSKTANPVAKRHFVQSAKEVANSTANLVKTIKALDGDFSEENRNKCRTATAPLIEAVENLTAFASNPEFVSIPAQISTEGSQAQEPILVSARTMLESSSLLIKTARSLAINPKDPPTWSVLAGHSHTVSDSIKSLITSIRDKAPGQRECDFSIDGINRCIRDIEQASLAAVSQSLATRDDISVEALQEQLTSVVQEIGHLIDPIATAARGEAAQLGHKVTQLASYFEPLVSAAVGVASKTLNHQQQMTVLDQSKTLAESALQILYAAKEGGGNPKASHTHDAITEAAQLMKEAVDDIMVTLNEAASEVGMVGGMVDSIAEAMTKLDEGTPPDPKGTFVDYQTTVVKYSKAIAVTAQEMMTKSVTNPEELGGLASQMTNDYGHLALQGRMAAATAEPEEIGFQIRTRVQELGHGCIFLVQKAGALQICPTDSYTKRELIECARAVTEKVSLVLSALQAGNKGTQACITAASAVSGIIADLDTTIMFA…
SIO_010081: TLN2
subclass of: SO_0000673
so part of: TLN2
location: join(1277486..1277621,1281425..1281522,1282169..1282298,1283567..1283719,1284865..1285007,1286407..1286534,1291559..1291622,1293765..1293869,1294630..1294785,1295680..1295781,1298598..1298674,1300268..1300448,1301990..1302103,1302769..1302877,1303559..1303767,1303899..1303997,1305471..1305638,1305770..1306064,1307401..1307567,1308626..1308754,1310160..1310273,1310576..1310689,1311988..1312122,1313037..1313165,1313781..1313883,1315439..1315647,1316455..1316574,1317425..1317622,1319649..1319788,1322464..1322557,1324080..1324169,1325299..1325421,1326640..1326783,1327052..1327213,1328308..1328448,1329551..1329732,1330154..1330286,1331723..1331824,1332581..1332751,1333353..1333499,1334332..1334433,1335768..1335887,1337391..1337537,1338280..1338446,1339163..1339346,1339974..1340099,1340393..1340509,1342497..1342682,1346383..1346490,1348534..1348639,1350223..1350347,1356858..1356983,1358724..1358786,1358879..1359061,1361238..1361363,1362290..1362418)
location: region:1277486-1362418:1
so has part: feature:1277486-1277621:1:exon
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so has part: feature:1361238-1361363:1:exon
so has part: feature:1362290-1362418:1:exon

XP_030811505.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1277486-1277621:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1281425-1281522:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1282169-1282298:1:exon

urn:…
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SIO_000628: feature:1283567-1283719:1:exon

urn:…
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SIO_000628: feature:1284865-1285007:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1286407-1286534:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1291559-1291622:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1293765-1293869:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1294630-1294785:1:exon

urn:…
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SIO_000628: feature:1295680-1295781:1:exon

urn:…
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SIO_000628: feature:1298598-1298674:1:exon

urn:…
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SIO_000628: feature:1300268-1300448:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1301990-1302103:1:exon

urn:…
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SIO_000628: feature:1302769-1302877:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1303559-1303767:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1303899-1303997:1:exon

urn:…
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SIO_000628: feature:1305471-1305638:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:1305770-1306064:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:1307401-1307567:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:1308626-1308754:1:exon

urn:…
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SIO_000628: feature:1310160-1310273:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:1310576-1310689:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:1311988-1312122:1:exon

urn:…
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SIO_000628: feature:1313037-1313165:1:exon

urn:…
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SIO_000628: feature:1313781-1313883:1:exon

urn:…
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SIO_000628: feature:1315439-1315647:1:exon

urn:…
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SIO_000628: feature:1316455-1316574:1:exon

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SIO_000628: feature:1317425-1317622:1:exon

urn:…
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SIO_000628: feature:1319649-1319788:1:exon

urn:…
SIO_000300: 30
SIO_000628: feature:1322464-1322557:1:exon

urn:…
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SIO_000628: feature:1324080-1324169:1:exon

urn:…
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SIO_000628: feature:1325299-1325421:1:exon

urn:…
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SIO_000628: feature:1326640-1326783:1:exon

urn:…
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SIO_000628: feature:1327052-1327213:1:exon

urn:…
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SIO_000628: feature:1328308-1328448:1:exon

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SIO_000628: feature:1329551-1329732:1:exon

urn:…
SIO_000300: 37
SIO_000628: feature:1330154-1330286:1:exon

urn:…
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SIO_000628: feature:1331723-1331824:1:exon

urn:…
SIO_000300: 39
SIO_000628: feature:1332581-1332751:1:exon

urn:…
SIO_000300: 40
SIO_000628: feature:1333353-1333499:1:exon

urn:…
SIO_000300: 41
SIO_000628: feature:1334332-1334433:1:exon

urn:…
SIO_000300: 42
SIO_000628: feature:1335768-1335887:1:exon

urn:…
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SIO_000628: feature:1337391-1337537:1:exon

urn:…
SIO_000300: 44
SIO_000628: feature:1338280-1338446:1:exon

urn:…
SIO_000300: 45
SIO_000628: feature:1339163-1339346:1:exon

urn:…
SIO_000300: 46
SIO_000628: feature:1339974-1340099:1:exon

urn:…
SIO_000300: 47
SIO_000628: feature:1340393-1340509:1:exon

urn:…
SIO_000300: 48
SIO_000628: feature:1342497-1342682:1:exon

urn:…
SIO_000300: 49
SIO_000628: feature:1346383-1346490:1:exon

urn:…
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SIO_000628: feature:1348534-1348639:1:exon

urn:…
SIO_000300: 51
SIO_000628: feature:1350223-1350347:1:exon

urn:…
SIO_000300: 52
SIO_000628: feature:1356858-1356983:1:exon

urn:…
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SIO_000628: feature:1358724-1358786:1:exon

urn:…
SIO_000300: 54
SIO_000628: feature:1358879-1359061:1:exon

urn:…
SIO_000300: 55
SIO_000628: feature:1361238-1361363:1:exon

urn:…
SIO_000300: 56
SIO_000628: feature:1362290-1362418:1:exon

TLN2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 87175
gene: TLN2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: talin-2 isoform X2
translation: MVALSLKICVRQCNVVKTMQFEPSTAVNDACRVIRERVPEAQTGQDDDPRKGIWLEAGRTLDYYMLRNGDILEYKKKQRPQKIRMLDGSVKTVMVDDSKTVGELLVTICSRIGITNYEEYSLIQESIEEKKEESTGTLKKDRTLLRDERKMEKLKAKLHTDDDLNWLDHSRTFREQGVDENETLLLRRKFFYSDQNVDSRDPVQLNLLYVQARDDILNGSHPVSFEKACEFGGFQAQIQFGPHVEHKHKPGFLDLKEFLPKEYTKQRGAEKRIFQEHKNCGEMTEIEAKVKYVKLARSLRTYGVSFFLVKEKMKGKNKLVPRLLGVTKDSVMRVDEKTKEVLQEWPLTTVKRWAASPKSFTLDFGEYQESYYSVQTTEGEQISQLIAGYIDIILKKKQSKDRFGLEGDEESTMLEESVSPKKPTILQQQFNRTGKVEHGSVALPAVMRSGSSGPETFNVGIMPSPQQQVTTGQMHRGHMPPLTSAQQALMGTINSSMHAVQQAQADLSEVDNLPPLGQDMASRVWVQNKVDESKHEIHSQVDAITAGTASVVNLTAGDPVDTDYTAVGCAITTISSNLTEMSKGVKLLAALMDDEVGSGEDLLKAARTLASAVSDLLKAVQPTSGEPRQTVLTAAGSIGQASGELLRQIGENETDERFQDVLMSLAKAVANAAAMLVLKAKNVAQVAEDTVLQNRVIAAATQCALSTSQLVACAKVVSPTISSPVCQEQLIEAGKLVDRSVENCVRACQAATDDSELLKQVSAAASIVSQALHDLLQHVRQFASRGEPIGRYDQATDTIMCVTESIFSSMGDAGEMVRQARVLAQATSDLVNAMRSDAEAEIDMENSKKLLAAAKLLADSTARMVEAAKGAAANPENEDQQQRLREAAEGLRVATNAAAQNAIKKKIVNRLEIAAKQAAAAATQTIAASQNAAVSNKNTAAHQQLVQSCKTVADHIPQLVQGVRGSQAQAEDLSAQLALINSSQNFLQPGSKMVASAKAAVPTVTDQAAAMQLSQCAKNLATSLAELRTASQKAHEACGPMEIDSALNTVQTLKNELQDAKMAAVDGQLKPLPGETLEKCTQDLGSTSKAVGSSMAQLLTCAAQGNEHYTGVAARETAQALKTLAQAARGVAASTSDPVAAHAMLDSARDVMEGSAMLIQEAKQALAAPGDADSQQRLAQVAKAVSHSLNNCVNCLPGQKDVDVALKSIGESSKKLLVDSLPPSSKSFQEAQSELNQAAADLNQSAGEVVHATRGQSGELAAASGKFSDDFDEFLDAGIEMAGQAQTKEDQIQVIGNLKSISMASSKLLLAAKSLSVDPGAPNAKNLLAAAARAVTESINQLITLCTQQAPGQKECDNALRELETVKGMLDNPNEPVSDLSYFDCIEGVMENSKVLGESMAGISQNAKTGDLLVFGECVGVASKALCGLTEAAAQAAYLVGISDPNSQAGQQGLVDPIQFARANQAIQMACQNLVDPASSPSQVLSAATIVAKHTSALCNACRIASSKTANPVAKRHFVQSAKEVANSTANLVKTIKALDGDFSEENRNKCRTATAPLIEAVENLTAFASNPEFVSIPAQISTEGSQAQEPILVSARTMLESSSLLIKTARSLAINPKDPPTWSVLAGHSHTVSDSIKSLITSIRDKAPGQRECDFSIDGINRCIRDIEQASLAAVSQSLATRDDISVEALQEQLTSVVQEIGHLIDPIATAARGEAAQLGHKVTQLASYFEPLVSAAVGVASKTLNHQQQMTVLDQSKTLAESALQILYAAKEGGGNPKASHTHDAITEAAQLMKEAVDDIMVTLNEAASEVGMVGGMVDSIAEAMTKLDEGTPPDPKGTFVDYQTTVVKYSKAIAVTAQEMMTKSVTNPEELGGLASQMTNDYGHLALQGRMAAATAEPEEIGFQIRTRVQELGHGCIFLVQKAGALQICPTDSYTKRELIECARAVTEKVSLVLSALQAGNKGTQACITAASAVSGIIADLDTTIMFATAGTLNAEN…
SIO_010081: TLN2
subclass of: SO_0000673
so part of: TLN2
location: join(1277486..1277621,1281452..1281522,1282169..1282298,1283567..1283719,1284865..1285007,1286407..1286534,1291559..1291622,1293765..1293869,1294630..1294785,1295680..1295781,1298598..1298674,1300268..1300448,1301990..1302103,1302769..1302877,1303559..1303767,1303899..1303997,1305471..1305638,1305770..1306064,1307401..1307567,1308626..1308754,1310160..1310273,1310576..1310689,1311988..1312122,1313037..1313165,1313781..1313883,1315439..1315647,1316455..1316574,1317425..1317622,1319649..1319788,1322464..1322557,1324080..1324169,1325299..1325421,1326640..1326783,1327052..1327213,1328308..1328448,1329551..1329732,1330154..1330286,1331723..1331824,1332581..1332751,1333353..1333499,1334332..1334433,1335768..1335887,1337391..1337537,1338280..1338446,1339163..1339346,1339974..1340099,1340393..1340509,1342497..1342682,1346383..1346490,1348534..1348639,1350223..1350347,1356858..1356983,1358724..1358786,1358879..1359061,1361238..1361363,1362290..1362418)
location: region:1277486-1362418:1
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so has part: feature:1358879-1359061:1:exon
so has part: feature:1361238-1361363:1:exon
so has part: feature:1362290-1362418:1:exon

XP_030811506.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1277486-1277621:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1281452-1281522:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1282169-1282298:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1283567-1283719:1:exon

urn:…
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SIO_000628: feature:1284865-1285007:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1286407-1286534:1:exon

urn:…
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SIO_000628: feature:1291559-1291622:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1293765-1293869:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1294630-1294785:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1295680-1295781:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1298598-1298674:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1300268-1300448:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1301990-1302103:1:exon

urn:…
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SIO_000628: feature:1302769-1302877:1:exon

urn:…
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SIO_000628: feature:1303559-1303767:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1303899-1303997:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1305471-1305638:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:1305770-1306064:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:1307401-1307567:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:1308626-1308754:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:1310160-1310273:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:1310576-1310689:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:1311988-1312122:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:1313037-1313165:1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:1313781-1313883:1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:1315439-1315647:1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:1316455-1316574:1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:1317425-1317622:1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:1319649-1319788:1:exon

urn:…
SIO_000300: 30
SIO_000628: feature:1322464-1322557:1:exon

urn:…
SIO_000300: 31
SIO_000628: feature:1324080-1324169:1:exon

urn:…
SIO_000300: 32
SIO_000628: feature:1325299-1325421:1:exon

urn:…
SIO_000300: 33
SIO_000628: feature:1326640-1326783:1:exon

urn:…
SIO_000300: 34
SIO_000628: feature:1327052-1327213:1:exon

urn:…
SIO_000300: 35
SIO_000628: feature:1328308-1328448:1:exon

urn:…
SIO_000300: 36
SIO_000628: feature:1329551-1329732:1:exon

urn:…
SIO_000300: 37
SIO_000628: feature:1330154-1330286:1:exon

urn:…
SIO_000300: 38
SIO_000628: feature:1331723-1331824:1:exon

urn:…
SIO_000300: 39
SIO_000628: feature:1332581-1332751:1:exon

urn:…
SIO_000300: 40
SIO_000628: feature:1333353-1333499:1:exon

urn:…
SIO_000300: 41
SIO_000628: feature:1334332-1334433:1:exon

urn:…
SIO_000300: 42
SIO_000628: feature:1335768-1335887:1:exon

urn:…
SIO_000300: 43
SIO_000628: feature:1337391-1337537:1:exon

urn:…
SIO_000300: 44
SIO_000628: feature:1338280-1338446:1:exon

urn:…
SIO_000300: 45
SIO_000628: feature:1339163-1339346:1:exon

urn:…
SIO_000300: 46
SIO_000628: feature:1339974-1340099:1:exon

urn:…
SIO_000300: 47
SIO_000628: feature:1340393-1340509:1:exon

urn:…
SIO_000300: 48
SIO_000628: feature:1342497-1342682:1:exon

urn:…
SIO_000300: 49
SIO_000628: feature:1346383-1346490:1:exon

urn:…
SIO_000300: 50
SIO_000628: feature:1348534-1348639:1:exon

urn:…
SIO_000300: 51
SIO_000628: feature:1350223-1350347:1:exon

urn:…
SIO_000300: 52
SIO_000628: feature:1356858-1356983:1:exon

urn:…
SIO_000300: 53
SIO_000628: feature:1358724-1358786:1:exon

urn:…
SIO_000300: 54
SIO_000628: feature:1358879-1359061:1:exon

urn:…
SIO_000300: 55
SIO_000628: feature:1361238-1361363:1:exon

urn:…
SIO_000300: 56
SIO_000628: feature:1362290-1362418:1:exon

TPM1
type: Gene
subclass of: SO_0000704
RO_0002162: 87175
gene: TPM1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1429585..1449628
location: region:1429585-1449628:1
so has part: feature:1429585-1449628:1:exon
subclass of: SO_0000010

115907212
type: Gene
SIO_000068: ncbigene

position:1429585:1
position: 1429585
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1449628:1
position: 1449628
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1429585-1449628:1:exon

TPM1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 87175
gene: TPM1
product: tropomyosin 1, transcript variant X6
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 5 ESTs, 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_030954882.1
SIO_010081: TPM1
subclass of: SO_0000673
so part of: TPM1
location: join(1429585..1429952,1430599..1430724,1437226..1437359,1438557..1438674,1439114..1439184,1439999..1440074,1440621..1440683,1440918..1440987,1442271..1448366)
location: region:1429585-1448366:1
so has part: feature:1429585-1429952:1:exon
so has part: feature:1430599-1430724:1:exon
so has part: feature:1437226-1437359:1:exon
so has part: feature:1438557-1438674:1:exon
so has part: feature:1439114-1439184:1:exon
so has part: feature:1439999-1440074:1:exon
so has part: feature:1440621-1440683:1:exon
so has part: feature:1440918-1440987:1:exon
so has part: feature:1442271-1448366:1:exon

position:1448366:1
position: 1448366
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1429585-1429952:1:exon

position:1429952:1
position: 1429952
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1430599-1430724:1:exon

position:1430599:1
position: 1430599
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1430724:1
position: 1430724
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1437226-1437359:1:exon

position:1437226:1
position: 1437226
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1437359:1
position: 1437359
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1438557-1438674:1:exon

position:1438557:1
position: 1438557
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1438674:1
position: 1438674
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1439114-1439184:1:exon

position:1439114:1
position: 1439114
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1439184:1
position: 1439184
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1439999-1440074:1:exon

position:1439999:1
position: 1439999
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1440074:1
position: 1440074
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1440621-1440683:1:exon

position:1440621:1
position: 1440621
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1440683:1
position: 1440683
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1440918-1440987:1:exon

position:1440918:1
position: 1440918
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1440987:1
position: 1440987
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:1442271-1448366:1:exon

position:1442271:1
position: 1442271
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

TPM1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 87175
gene: TPM1
product: tropomyosin 1, transcript variant X5
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 22 ESTs, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_030954881.1
SIO_010081: TPM1
subclass of: SO_0000673
so part of: TPM1
location: join(1429585..1429952,1430599..1430724,1437226..1437359,1438557..1438674,1439114..1439184,1439999..1440074,1440621..1440683,1440918..1440987,1442271..1442349,1443773..1443979)
location: region:1429585-1443979:1
so has part: feature:1429585-1429952:1:exon
so has part: feature:1430599-1430724:1:exon
so has part: feature:1437226-1437359:1:exon
so has part: feature:1438557-1438674:1:exon
so has part: feature:1439114-1439184:1:exon
so has part: feature:1439999-1440074:1:exon
so has part: feature:1440621-1440683:1:exon
so has part: feature:1440918-1440987:1:exon
so has part: feature:1442271-1442349:1:exon
so has part: feature:1443773-1443979:1:exon

position:1443979:1
position: 1443979
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1429585-1429952:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1430599-1430724:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1437226-1437359:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1438557-1438674:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1439114-1439184:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1439999-1440074:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1440621-1440683:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1440918-1440987:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1442271-1442349:1:exon

position:1442349:1
position: 1442349
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:1443773-1443979:1:exon

position:1443773:1
position: 1443773
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

TPM1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 87175
gene: TPM1
product: tropomyosin 1, transcript variant X7
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 42 ESTs, 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
transcript id: XM_030954883.1
SIO_010081: TPM1
subclass of: SO_0000673
so part of: TPM1
location: join(1429586..1429952,1430599..1430724,1437226..1437359,1438557..1438674,1439114..1439184,1439433..1439508,1440621..1440683,1440918..1440987,1448685..1449628)
location: region:1429586-1449628:1
so has part: feature:1429586-1429952:1:exon
so has part: feature:1430599-1430724:1:exon
so has part: feature:1437226-1437359:1:exon
so has part: feature:1438557-1438674:1:exon
so has part: feature:1439114-1439184:1:exon
so has part: feature:1439433-1439508:1:exon
so has part: feature:1440621-1440683:1:exon
so has part: feature:1440918-1440987:1:exon
so has part: feature:1448685-1449628:1:exon

position:1429586:1
position: 1429586
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1429586-1429952:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1430599-1430724:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1437226-1437359:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1438557-1438674:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1439114-1439184:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1439433-1439508:1:exon

position:1439433:1
position: 1439433
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1439508:1
position: 1439508
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1440621-1440683:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1440918-1440987:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1448685-1449628:1:exon

position:1448685:1
position: 1448685
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

TPM1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 87175
gene: TPM1
product: tropomyosin 1, transcript variant X8
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 30 ESTs, 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_030954884.1
SIO_010081: TPM1
subclass of: SO_0000673
so part of: TPM1
location: join(1429586..1429952,1430908..1431033,1437226..1437359,1438557..1438674,1439114..1439184,1439433..1439508,1440621..1440683,1440918..1440987,1442271..1448366)
location: region:1429586-1448366:1
so has part: feature:1429586-1429952:1:exon
so has part: feature:1430908-1431033:1:exon
so has part: feature:1437226-1437359:1:exon
so has part: feature:1438557-1438674:1:exon
so has part: feature:1439114-1439184:1:exon
so has part: feature:1439433-1439508:1:exon
so has part: feature:1440621-1440683:1:exon
so has part: feature:1440918-1440987:1:exon
so has part: feature:1442271-1448366:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1429586-1429952:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1430908-1431033:1:exon

position:1430908:1
position: 1430908
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1431033:1
position: 1431033
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1437226-1437359:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1438557-1438674:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1439114-1439184:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1439433-1439508:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1440621-1440683:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1440918-1440987:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1442271-1448366:1:exon

TPM1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 87175
gene: TPM1
product: tropomyosin 1, transcript variant X14
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 47 ESTs, 3 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_030954891.1
SIO_010081: TPM1
subclass of: SO_0000673
so part of: TPM1
location: join(1429586..1429952,1430908..1431033,1437226..1437359,1438557..1438674,1439114..1439184,1439999..1440074,1440621..1440683,1440918..1440987,1443773..1448366)
location: region:1429586-1448366:1
so has part: feature:1429586-1429952:1:exon
so has part: feature:1430908-1431033:1:exon
so has part: feature:1437226-1437359:1:exon
so has part: feature:1438557-1438674:1:exon
so has part: feature:1439114-1439184:1:exon
so has part: feature:1439999-1440074:1:exon
so has part: feature:1440621-1440683:1:exon
so has part: feature:1440918-1440987:1:exon
so has part: feature:1443773-1448366:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1429586-1429952:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1430908-1431033:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1437226-1437359:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1438557-1438674:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1439114-1439184:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1439999-1440074:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1440621-1440683:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1440918-1440987:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1443773-1448366:1:exon

TPM1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 87175
gene: TPM1
product: tropomyosin 1, transcript variant X13
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 32 ESTs, 5 Proteins, and 98% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_030954890.1
SIO_010081: TPM1
subclass of: SO_0000673
so part of: TPM1
location: join(1429588..1429952,1430599..1430724,1430908..1431033,1437226..1437359,1438557..1438674,1439114..1439184,1439999..1440074,1440621..1440683,1440918..1440987,1448685..1449628)
location: region:1429588-1449628:1
so has part: feature:1429588-1429952:1:exon
so has part: feature:1430599-1430724:1:exon
so has part: feature:1430908-1431033:1:exon
so has part: feature:1437226-1437359:1:exon
so has part: feature:1438557-1438674:1:exon
so has part: feature:1439114-1439184:1:exon
so has part: feature:1439999-1440074:1:exon
so has part: feature:1440621-1440683:1:exon
so has part: feature:1440918-1440987:1:exon
so has part: feature:1448685-1449628:1:exon

position:1429588:1
position: 1429588
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1429588-1429952:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1430599-1430724:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1430908-1431033:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1437226-1437359:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1438557-1438674:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1439114-1439184:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1439999-1440074:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1440621-1440683:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1440918-1440987:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1448685-1449628:1:exon

TPM1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 87175
gene: TPM1
product: tropomyosin 1, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 34 ESTs, 7 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
transcript id: XM_030954879.1
SIO_010081: TPM1
subclass of: SO_0000673
so part of: TPM1
location: join(1429588..1429952,1430599..1430724,1437226..1437359,1438557..1438674,1439114..1439184,1439999..1440074,1440621..1440683,1440918..1440987,1448685..1449628)
location: region:1429588-1449628:1
so has part: feature:1429588-1429952:1:exon
so has part: feature:1430599-1430724:1:exon
so has part: feature:1437226-1437359:1:exon
so has part: feature:1438557-1438674:1:exon
so has part: feature:1439114-1439184:1:exon
so has part: feature:1439999-1440074:1:exon
so has part: feature:1440621-1440683:1:exon
so has part: feature:1440918-1440987:1:exon
so has part: feature:1448685-1449628:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1429588-1429952:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1430599-1430724:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1437226-1437359:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1438557-1438674:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1439114-1439184:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1439999-1440074:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1440621-1440683:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1440918-1440987:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1448685-1449628:1:exon

TPM1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 87175
gene: TPM1
product: tropomyosin 1, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 mRNAs, 65 ESTs, 15 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
transcript id: XM_030954880.1
SIO_010081: TPM1
subclass of: SO_0000673
so part of: TPM1
location: join(1429589..1429952,1430908..1431033,1437226..1437359,1438557..1438674,1439114..1439184,1439433..1439508,1440621..1440683,1440918..1440987,1448685..1449628)
location: region:1429589-1449628:1
so has part: feature:1429589-1429952:1:exon
so has part: feature:1430908-1431033:1:exon
so has part: feature:1437226-1437359:1:exon
so has part: feature:1438557-1438674:1:exon
so has part: feature:1439114-1439184:1:exon
so has part: feature:1439433-1439508:1:exon
so has part: feature:1440621-1440683:1:exon
so has part: feature:1440918-1440987:1:exon
so has part: feature:1448685-1449628:1:exon

position:1429589:1
position: 1429589
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1429589-1429952:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1430908-1431033:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1437226-1437359:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1438557-1438674:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1439114-1439184:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1439433-1439508:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1440621-1440683:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1440918-1440987:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1448685-1449628:1:exon

TPM1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 87175
gene: TPM1
product: tropomyosin 1, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 9 mRNAs, 69 ESTs, 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_030954878.1
SIO_010081: TPM1
subclass of: SO_0000673
so part of: TPM1
location: join(1429589..1429952,1430908..1431033,1437226..1437359,1438557..1438674,1439114..1439184,1439999..1440074,1440621..1440683,1440918..1440987,1442271..1442349,1443773..1444056)
location: region:1429589-1444056:1
so has part: feature:1429589-1429952:1:exon
so has part: feature:1430908-1431033:1:exon
so has part: feature:1437226-1437359:1:exon
so has part: feature:1438557-1438674:1:exon
so has part: feature:1439114-1439184:1:exon
so has part: feature:1439999-1440074:1:exon
so has part: feature:1440621-1440683:1:exon
so has part: feature:1440918-1440987:1:exon
so has part: feature:1442271-1442349:1:exon
so has part: feature:1443773-1444056:1:exon

position:1444056:1
position: 1444056
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1429589-1429952:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1430908-1431033:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1437226-1437359:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1438557-1438674:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1439114-1439184:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1439999-1440074:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1440621-1440683:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1440918-1440987:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1442271-1442349:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1443773-1444056:1:exon

TPM1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 87175
gene: TPM1
product: tropomyosin 1, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 75 ESTs, 17 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
transcript id: XM_030954877.1
SIO_010081: TPM1
subclass of: SO_0000673
so part of: TPM1
location: join(1429592..1429952,1430908..1431033,1437226..1437359,1438557..1438674,1439114..1439184,1439999..1440074,1440621..1440683,1440918..1440987,1448685..1449628)
location: region:1429592-1449628:1
so has part: feature:1429592-1429952:1:exon
so has part: feature:1430908-1431033:1:exon
so has part: feature:1437226-1437359:1:exon
so has part: feature:1438557-1438674:1:exon
so has part: feature:1439114-1439184:1:exon
so has part: feature:1439999-1440074:1:exon
so has part: feature:1440621-1440683:1:exon
so has part: feature:1440918-1440987:1:exon
so has part: feature:1448685-1449628:1:exon

position:1429592:1
position: 1429592
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1429592-1429952:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1430908-1431033:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1437226-1437359:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1438557-1438674:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1439114-1439184:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1439999-1440074:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1440621-1440683:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1440918-1440987:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1448685-1449628:1:exon

TPM1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 87175
gene: TPM1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: tropomyosin alpha-1 chain isoform X13
translation: MDAIKKKMQMLKLDKENALDRAEQAEADKKAAEERSKQLENDIVQLEKQLRGTEDTRDQVLEELHKSEDSLLSAEENAAKLEDELVALQKKLKATEDELDKYSESLKDAQEKLELADKKATDAESEVASLNRRIQLVEEELDRAQERLATALQKLEEAEKAADESERGMKVIENRAQKDEEKMEIQEIQLKEAKHIAEEADRKYEEVARKLVIIESDLERAEERAELSESKCAELEEELKTVTNNLKSLEAQAEKYSQKEDKYEEEIKVLTDKLKEAETRAEFAERSVTKLEKSIDDLEEKVAHAKEENLNMHQMLDQTLLELNNM
SIO_010081: TPM1
subclass of: SO_0000673
so part of: TPM1
location: join(1429839..1429952,1430599..1430724,1430908..1431033,1437226..1437359,1438557..1438674,1439114..1439184,1439999..1440074,1440621..1440683,1440918..1440987,1448685..1448767)
location: region:1429839-1448767:1
so has part: feature:1429839-1429952:1:exon
so has part: feature:1430599-1430724:1:exon
so has part: feature:1430908-1431033:1:exon
so has part: feature:1437226-1437359:1:exon
so has part: feature:1438557-1438674:1:exon
so has part: feature:1439114-1439184:1:exon
so has part: feature:1439999-1440074:1:exon
so has part: feature:1440621-1440683:1:exon
so has part: feature:1440918-1440987:1:exon
so has part: feature:1448685-1448767:1:exon

XP_030810750.1
type: Protein
SIO_000068: ncbiprotein

position:1429839:1
position: 1429839
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1448767:1
position: 1448767
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1429839-1429952:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1430599-1430724:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1430908-1431033:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1437226-1437359:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1438557-1438674:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1439114-1439184:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1439999-1440074:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1440621-1440683:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1440918-1440987:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1448685-1448767:1:exon

TPM1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 87175
gene: TPM1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: tropomyosin alpha-1 chain isoform X7
translation: MDAIKKKMQMLKLDKENALDRAEQAEADKKAAEERSKQLENDIVQLEKQLRGTEDTRDQVLEELHKSEDSLLSAEENAAKAESEVASLNRRIQLVEEELDRAQERLATALQKLEEAEKAADESERGMKVIENRAQKDEEKMEIQEIQLKEAKHIAEEADRKYEEVARKLVIIESDLERAEERAELSESQVRQLEEQLRIMDQTLKALMAAEDKYSQKEDKYEEEIKVLTDKLKEAETRAEFAERSVTKLEKSIDDLEEKVAHAKEENLNMHQMLDQTLLELNNM
SIO_010081: TPM1
subclass of: SO_0000673
so part of: TPM1
location: join(1429839..1429952,1430599..1430724,1437226..1437359,1438557..1438674,1439114..1439184,1439433..1439508,1440621..1440683,1440918..1440987,1448685..1448767)
location: region:1429839-1448767:1
so has part: feature:1429839-1429952:1:exon
so has part: feature:1430599-1430724:1:exon
so has part: feature:1437226-1437359:1:exon
so has part: feature:1438557-1438674:1:exon
so has part: feature:1439114-1439184:1:exon
so has part: feature:1439433-1439508:1:exon
so has part: feature:1440621-1440683:1:exon
so has part: feature:1440918-1440987:1:exon
so has part: feature:1448685-1448767:1:exon

XP_030810743.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1429839-1429952:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1430599-1430724:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1437226-1437359:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1438557-1438674:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1439114-1439184:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1439433-1439508:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1440621-1440683:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1440918-1440987:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1448685-1448767:1:exon

TPM1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 87175
gene: TPM1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: tropomyosin alpha-1 chain isoform X3
translation: MDAIKKKMQMLKLDKENALDRAEQAEADKKAAEERSKQLENDIVQLEKQLRGTEDTRDQVLEELHKSEDSLLSAEENAAKAESEVASLNRRIQLVEEELDRAQERLATALQKLEEAEKAADESERGMKVIENRAQKDEEKMEIQEIQLKEAKHIAEEADRKYEEVARKLVIIESDLERAEERAELSESKCAELEEELKTVTNNLKSLEAQAEKYSQKEDKYEEEIKVLTDKLKEAETRAEFAERSVTKLEKSIDDLEEKVAHAKEENLNMHQMLDQTLLELNNM
SIO_010081: TPM1
subclass of: SO_0000673
so part of: TPM1
location: join(1429839..1429952,1430599..1430724,1437226..1437359,1438557..1438674,1439114..1439184,1439999..1440074,1440621..1440683,1440918..1440987,1448685..1448767)
location: region:1429839-1448767:1
so has part: feature:1429839-1429952:1:exon
so has part: feature:1430599-1430724:1:exon
so has part: feature:1437226-1437359:1:exon
so has part: feature:1438557-1438674:1:exon
so has part: feature:1439114-1439184:1:exon
so has part: feature:1439999-1440074:1:exon
so has part: feature:1440621-1440683:1:exon
so has part: feature:1440918-1440987:1:exon
so has part: feature:1448685-1448767:1:exon

XP_030810739.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1429839-1429952:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1430599-1430724:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1437226-1437359:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1438557-1438674:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1439114-1439184:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1439999-1440074:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1440621-1440683:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1440918-1440987:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1448685-1448767:1:exon

TPM1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 87175
gene: TPM1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: tropomyosin alpha-1 chain isoform X4
translation: MDAIKKKMQMLKLDKENALDRAEQAEADKKAAEERSKQLEDELVALQKKLKATEDELDKYSESLKDAQEKLELADKKATDAESEVASLNRRIQLVEEELDRAQERLATALQKLEEAEKAADESERGMKVIENRAQKDEEKMEIQEIQLKEAKHIAEEADRKYEEVARKLVIIESDLERAEERAELSESQVRQLEEQLRIMDQTLKALMAAEDKYSQKEDKYEEEIKVLTDKLKEAETRAEFAERSVTKLEKSIDDLEEKVAHAKEENLNMHQMLDQTLLELNNM
SIO_010081: TPM1
subclass of: SO_0000673
so part of: TPM1
location: join(1429839..1429952,1430908..1431033,1437226..1437359,1438557..1438674,1439114..1439184,1439433..1439508,1440621..1440683,1440918..1440987,1448685..1448767)
location: region:1429839-1448767:1
so has part: feature:1429839-1429952:1:exon
so has part: feature:1430908-1431033:1:exon
so has part: feature:1437226-1437359:1:exon
so has part: feature:1438557-1438674:1:exon
so has part: feature:1439114-1439184:1:exon
so has part: feature:1439433-1439508:1:exon
so has part: feature:1440621-1440683:1:exon
so has part: feature:1440918-1440987:1:exon
so has part: feature:1448685-1448767:1:exon

XP_030810740.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1429839-1429952:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1430908-1431033:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1437226-1437359:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1438557-1438674:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1439114-1439184:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1439433-1439508:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1440621-1440683:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1440918-1440987:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1448685-1448767:1:exon

TPM1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 87175
gene: TPM1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: tropomyosin alpha-1 chain isoform X1
translation: MDAIKKKMQMLKLDKENALDRAEQAEADKKAAEERSKQLEDELVALQKKLKATEDELDKYSESLKDAQEKLELADKKATDAESEVASLNRRIQLVEEELDRAQERLATALQKLEEAEKAADESERGMKVIENRAQKDEEKMEIQEIQLKEAKHIAEEADRKYEEVARKLVIIESDLERAEERAELSESKCAELEEELKTVTNNLKSLEAQAEKYSQKEDKYEEEIKVLTDKLKEAETRAEFAERSVTKLEKSIDDLEEKVAHAKEENLNMHQMLDQTLLELNNM
SIO_010081: TPM1
subclass of: SO_0000673
so part of: TPM1
location: join(1429839..1429952,1430908..1431033,1437226..1437359,1438557..1438674,1439114..1439184,1439999..1440074,1440621..1440683,1440918..1440987,1448685..1448767)
location: region:1429839-1448767:1
so has part: feature:1429839-1429952:1:exon
so has part: feature:1430908-1431033:1:exon
so has part: feature:1437226-1437359:1:exon
so has part: feature:1438557-1438674:1:exon
so has part: feature:1439114-1439184:1:exon
so has part: feature:1439999-1440074:1:exon
so has part: feature:1440621-1440683:1:exon
so has part: feature:1440918-1440987:1:exon
so has part: feature:1448685-1448767:1:exon

XP_030810737.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1429839-1429952:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1430908-1431033:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1437226-1437359:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1438557-1438674:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1439114-1439184:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1439999-1440074:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1440621-1440683:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1440918-1440987:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1448685-1448767:1:exon

TPM1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 87175
gene: TPM1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: tropomyosin alpha-1 chain isoform X14
translation: MDAIKKKMQMLKLDKENALDRAEQAEADKKAAEERSKQLEDELVALQKKLKATEDELDKYSESLKDAQEKLELADKKATDAESEVASLNRRIQLVEEELDRAQERLATALQKLEEAEKAADESERGMKVIENRAQKDEEKMEIQEIQLKEAKHIAEEADRKYEEVARKLVIIESDLERAEERAELSESKCAELEEELKTVTNNLKSLEAQAEKYSQKEDKYEEEIKVLTDKLKEAETRAEFAERSVTKLEKSIDDLEDNFLCFSSPKTSSSGWIKHLSKLWMFHGLIVLSSSLVDSSSITCLRTCSVCALLYRNYISQCKINIPAVSLLLFLCLLFI
SIO_010081: TPM1
subclass of: SO_0000673
so part of: TPM1
location: join(1429839..1429952,1430908..1431033,1437226..1437359,1438557..1438674,1439114..1439184,1439999..1440074,1440621..1440683,1440918..1440987,1443773..1444014)
location: region:1429839-1444014:1
so has part: feature:1429839-1429952:1:exon
so has part: feature:1430908-1431033:1:exon
so has part: feature:1437226-1437359:1:exon
so has part: feature:1438557-1438674:1:exon
so has part: feature:1439114-1439184:1:exon
so has part: feature:1439999-1440074:1:exon
so has part: feature:1440621-1440683:1:exon
so has part: feature:1440918-1440987:1:exon
so has part: feature:1443773-1444014:1:exon

XP_030810751.1
type: Protein
SIO_000068: ncbiprotein

position:1444014:1
position: 1444014
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1429839-1429952:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1430908-1431033:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1437226-1437359:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1438557-1438674:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1439114-1439184:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1439999-1440074:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1440621-1440683:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1440918-1440987:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1443773-1444014:1:exon

TPM1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 87175
gene: TPM1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: tropomyosin alpha-1 chain isoform X5
translation: MDAIKKKMQMLKLDKENALDRAEQAEADKKAAEERSKQLENDIVQLEKQLRGTEDTRDQVLEELHKSEDSLLSAEENAAKAESEVASLNRRIQLVEEELDRAQERLATALQKLEEAEKAADESERGMKVIENRAQKDEEKMEIQEIQLKEAKHIAEEADRKYEEVARKLVIIESDLERAEERAELSESKCAELEEELKTVTNNLKSLEAQAEKYSQKEDKYEEEIKVLTDKLKEAETRAEFAERSVTKLEKSIDDLEDELYAQKLKYKAISEELDHALNDMTSI
SIO_010081: TPM1
subclass of: SO_0000673
so part of: TPM1
location: join(1429839..1429952,1430599..1430724,1437226..1437359,1438557..1438674,1439114..1439184,1439999..1440074,1440621..1440683,1440918..1440987,1442271..1442349,1443773..1443776)
location: region:1429839-1443776:1
so has part: feature:1429839-1429952:1:exon
so has part: feature:1430599-1430724:1:exon
so has part: feature:1437226-1437359:1:exon
so has part: feature:1438557-1438674:1:exon
so has part: feature:1439114-1439184:1:exon
so has part: feature:1439999-1440074:1:exon
so has part: feature:1440621-1440683:1:exon
so has part: feature:1440918-1440987:1:exon
so has part: feature:1442271-1442349:1:exon
so has part: feature:1443773-1443776:1:exon

XP_030810741.1
type: Protein
SIO_000068: ncbiprotein

position:1443776:1
position: 1443776
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1429839-1429952:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1430599-1430724:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1437226-1437359:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1438557-1438674:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1439114-1439184:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1439999-1440074:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1440621-1440683:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1440918-1440987:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1442271-1442349:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1443773-1443776:1:exon

TPM1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 87175
gene: TPM1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: tropomyosin alpha-1 chain isoform X2
translation: MDAIKKKMQMLKLDKENALDRAEQAEADKKAAEERSKQLEDELVALQKKLKATEDELDKYSESLKDAQEKLELADKKATDAESEVASLNRRIQLVEEELDRAQERLATALQKLEEAEKAADESERGMKVIENRAQKDEEKMEIQEIQLKEAKHIAEEADRKYEEVARKLVIIESDLERAEERAELSESKCAELEEELKTVTNNLKSLEAQAEKYSQKEDKYEEEIKVLTDKLKEAETRAEFAERSVTKLEKSIDDLEDELYAQKLKYKAISEELDHALNDMTSI
SIO_010081: TPM1
subclass of: SO_0000673
so part of: TPM1
location: join(1429839..1429952,1430908..1431033,1437226..1437359,1438557..1438674,1439114..1439184,1439999..1440074,1440621..1440683,1440918..1440987,1442271..1442349,1443773..1443776)
location: region:1429839-1443776:1
so has part: feature:1429839-1429952:1:exon
so has part: feature:1430908-1431033:1:exon
so has part: feature:1437226-1437359:1:exon
so has part: feature:1438557-1438674:1:exon
so has part: feature:1439114-1439184:1:exon
so has part: feature:1439999-1440074:1:exon
so has part: feature:1440621-1440683:1:exon
so has part: feature:1440918-1440987:1:exon
so has part: feature:1442271-1442349:1:exon
so has part: feature:1443773-1443776:1:exon

XP_030810738.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1429839-1429952:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1430908-1431033:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1437226-1437359:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1438557-1438674:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1439114-1439184:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1439999-1440074:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1440621-1440683:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1440918-1440987:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1442271-1442349:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1443773-1443776:1:exon

TPM1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 87175
gene: TPM1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: tropomyosin alpha-1 chain isoform X6
translation: MDAIKKKMQMLKLDKENALDRAEQAEADKKAAEERSKQLENDIVQLEKQLRGTEDTRDQVLEELHKSEDSLLSAEENAAKAESEVASLNRRIQLVEEELDRAQERLATALQKLEEAEKAADESERGMKVIENRAQKDEEKMEIQEIQLKEAKHIAEEADRKYEEVARKLVIIESDLERAEERAELSESKCAELEEELKTVTNNLKSLEAQAEKYSQKEDKYEEEIKVLTDKLKEAETRAEFAERSVTKLEKSIDDLEDELYAQKLKYKAISEELDHALNDMTSM
SIO_010081: TPM1
subclass of: SO_0000673
so part of: TPM1
location: join(1429839..1429952,1430599..1430724,1437226..1437359,1438557..1438674,1439114..1439184,1439999..1440074,1440621..1440683,1440918..1440987,1442271..1442353)
location: region:1429839-1442353:1
so has part: feature:1429839-1429952:1:exon
so has part: feature:1430599-1430724:1:exon
so has part: feature:1437226-1437359:1:exon
so has part: feature:1438557-1438674:1:exon
so has part: feature:1439114-1439184:1:exon
so has part: feature:1439999-1440074:1:exon
so has part: feature:1440621-1440683:1:exon
so has part: feature:1440918-1440987:1:exon
so has part: feature:1442271-1442353:1:exon

XP_030810742.1
type: Protein
SIO_000068: ncbiprotein

position:1442353:1
position: 1442353
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1429839-1429952:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1430599-1430724:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1437226-1437359:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1438557-1438674:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1439114-1439184:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1439999-1440074:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1440621-1440683:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1440918-1440987:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1442271-1442353:1:exon

TPM1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 87175
gene: TPM1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: tropomyosin alpha-1 chain isoform X8
translation: MDAIKKKMQMLKLDKENALDRAEQAEADKKAAEERSKQLEDELVALQKKLKATEDELDKYSESLKDAQEKLELADKKATDAESEVASLNRRIQLVEEELDRAQERLATALQKLEEAEKAADESERGMKVIENRAQKDEEKMEIQEIQLKEAKHIAEEADRKYEEVARKLVIIESDLERAEERAELSESQVRQLEEQLRIMDQTLKALMAAEDKYSQKEDKYEEEIKVLTDKLKEAETRAEFAERSVTKLEKSIDDLEDELYAQKLKYKAISEELDHALNDMTSM
SIO_010081: TPM1
subclass of: SO_0000673
so part of: TPM1
location: join(1429839..1429952,1430908..1431033,1437226..1437359,1438557..1438674,1439114..1439184,1439433..1439508,1440621..1440683,1440918..1440987,1442271..1442353)
location: region:1429839-1442353:1
so has part: feature:1429839-1429952:1:exon
so has part: feature:1430908-1431033:1:exon
so has part: feature:1437226-1437359:1:exon
so has part: feature:1438557-1438674:1:exon
so has part: feature:1439114-1439184:1:exon
so has part: feature:1439433-1439508:1:exon
so has part: feature:1440621-1440683:1:exon
so has part: feature:1440918-1440987:1:exon
so has part: feature:1442271-1442353:1:exon

XP_030810744.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1429839-1429952:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1430908-1431033:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1437226-1437359:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1438557-1438674:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1439114-1439184:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1439433-1439508:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1440621-1440683:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1440918-1440987:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1442271-1442353:1:exon

TPM1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 87175
gene: TPM1
product: tropomyosin 1, transcript variant X12
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 9 ESTs, 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_030954889.1
SIO_010081: TPM1
subclass of: SO_0000673
so part of: TPM1
location: join(1432992..1433539,1437226..1437359,1438557..1438674,1439114..1439184,1439433..1439508,1440621..1440683,1440918..1440987,1442271..1442349,1443773..1443979)
location: region:1432992-1443979:1
so has part: feature:1432992-1433539:1:exon
so has part: feature:1437226-1437359:1:exon
so has part: feature:1438557-1438674:1:exon
so has part: feature:1439114-1439184:1:exon
so has part: feature:1439433-1439508:1:exon
so has part: feature:1440621-1440683:1:exon
so has part: feature:1440918-1440987:1:exon
so has part: feature:1442271-1442349:1:exon
so has part: feature:1443773-1443979:1:exon

position:1432992:1
position: 1432992
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1432992-1433539:1:exon

position:1433539:1
position: 1433539
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1437226-1437359:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1438557-1438674:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1439114-1439184:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1439433-1439508:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1440621-1440683:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1440918-1440987:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1442271-1442349:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1443773-1443979:1:exon

TPM1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 87175
gene: TPM1
product: tropomyosin 1, transcript variant X15
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 ESTs, 2 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_030954892.1
SIO_010081: TPM1
subclass of: SO_0000673
so part of: TPM1
location: join(1432995..1433539,1437226..1437359,1438557..1438674,1439114..1439184,1439999..1440074,1440621..1440683,1440918..1440987,1443773..1448366)
location: region:1432995-1448366:1
so has part: feature:1432995-1433539:1:exon
so has part: feature:1437226-1437359:1:exon
so has part: feature:1438557-1438674:1:exon
so has part: feature:1439114-1439184:1:exon
so has part: feature:1439999-1440074:1:exon
so has part: feature:1440621-1440683:1:exon
so has part: feature:1440918-1440987:1:exon
so has part: feature:1443773-1448366:1:exon

position:1432995:1
position: 1432995
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1432995-1433539:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1437226-1437359:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1438557-1438674:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1439114-1439184:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1439999-1440074:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1440621-1440683:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1440918-1440987:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1443773-1448366:1:exon

TPM1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 87175
gene: TPM1
product: tropomyosin 1, transcript variant X10
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 ESTs, 13 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_030954887.1
SIO_010081: TPM1
subclass of: SO_0000673
so part of: TPM1
location: join(1433004..1433539,1437226..1437359,1438557..1438674,1439114..1439184,1439999..1440074,1440621..1440683,1440918..1440987,1442271..1448366)
location: region:1433004-1448366:1
so has part: feature:1433004-1433539:1:exon
so has part: feature:1437226-1437359:1:exon
so has part: feature:1438557-1438674:1:exon
so has part: feature:1439114-1439184:1:exon
so has part: feature:1439999-1440074:1:exon
so has part: feature:1440621-1440683:1:exon
so has part: feature:1440918-1440987:1:exon
so has part: feature:1442271-1448366:1:exon

position:1433004:1
position: 1433004
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1433004-1433539:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1437226-1437359:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1438557-1438674:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1439114-1439184:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1439999-1440074:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1440621-1440683:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1440918-1440987:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1442271-1448366:1:exon

TPM1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 87175
gene: TPM1
product: tropomyosin 1, transcript variant X11
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 45 ESTs, 13 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
transcript id: XM_030954888.1
SIO_010081: TPM1
subclass of: SO_0000673
so part of: TPM1
location: join(1433005..1433539,1437226..1437359,1438557..1438674,1439114..1439184,1439433..1439508,1440621..1440683,1440918..1440987,1448685..1449628)
location: region:1433005-1449628:1
so has part: feature:1433005-1433539:1:exon
so has part: feature:1437226-1437359:1:exon
so has part: feature:1438557-1438674:1:exon
so has part: feature:1439114-1439184:1:exon
so has part: feature:1439433-1439508:1:exon
so has part: feature:1440621-1440683:1:exon
so has part: feature:1440918-1440987:1:exon
so has part: feature:1448685-1449628:1:exon

position:1433005:1
position: 1433005
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1433005-1433539:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1437226-1437359:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1438557-1438674:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1439114-1439184:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1439433-1439508:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1440621-1440683:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1440918-1440987:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1448685-1449628:1:exon

TPM1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 87175
gene: TPM1
product: tropomyosin 1, transcript variant X9
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 32 ESTs, 10 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
transcript id: XM_030954885.1
SIO_010081: TPM1
subclass of: SO_0000673
so part of: TPM1
location: join(1433015..1433539,1437226..1437359,1438557..1438674,1439114..1439184,1439999..1440074,1440621..1440683,1440918..1440987,1448685..1449628)
location: region:1433015-1449628:1
so has part: feature:1433015-1433539:1:exon
so has part: feature:1437226-1437359:1:exon
so has part: feature:1438557-1438674:1:exon
so has part: feature:1439114-1439184:1:exon
so has part: feature:1439999-1440074:1:exon
so has part: feature:1440621-1440683:1:exon
so has part: feature:1440918-1440987:1:exon
so has part: feature:1448685-1449628:1:exon

position:1433015:1
position: 1433015
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1433015-1433539:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1437226-1437359:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1438557-1438674:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1439114-1439184:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1439999-1440074:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1440621-1440683:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1440918-1440987:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1448685-1449628:1:exon

TPM1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 87175
gene: TPM1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: tropomyosin alpha-1 chain isoform X11
translation: MAAMSSLEAVRRKIRSLQEQADAAEERAGRLQREVDQERALREEAESEVASLNRRIQLVEEELDRAQERLATALQKLEEAEKAADESERGMKVIENRAQKDEEKMEIQEIQLKEAKHIAEEADRKYEEVARKLVIIESDLERAEERAELSESQVRQLEEQLRIMDQTLKALMAAEDKYSQKEDKYEEEIKVLTDKLKEAETRAEFAERSVTKLEKSIDDLEEKVAHAKEENLNMHQMLDQTLLELNNM
SIO_010081: TPM1
subclass of: SO_0000673
so part of: TPM1
location: join(1433408..1433539,1437226..1437359,1438557..1438674,1439114..1439184,1439433..1439508,1440621..1440683,1440918..1440987,1448685..1448767)
location: region:1433408-1448767:1
so has part: feature:1433408-1433539:1:exon
so has part: feature:1437226-1437359:1:exon
so has part: feature:1438557-1438674:1:exon
so has part: feature:1439114-1439184:1:exon
so has part: feature:1439433-1439508:1:exon
so has part: feature:1440621-1440683:1:exon
so has part: feature:1440918-1440987:1:exon
so has part: feature:1448685-1448767:1:exon

XP_030810748.1
type: Protein
SIO_000068: ncbiprotein

position:1433408:1
position: 1433408
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1433408-1433539:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1437226-1437359:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1438557-1438674:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1439114-1439184:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1439433-1439508:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1440621-1440683:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1440918-1440987:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1448685-1448767:1:exon

TPM1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 87175
gene: TPM1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: tropomyosin alpha-1 chain isoform X9
translation: MAAMSSLEAVRRKIRSLQEQADAAEERAGRLQREVDQERALREEAESEVASLNRRIQLVEEELDRAQERLATALQKLEEAEKAADESERGMKVIENRAQKDEEKMEIQEIQLKEAKHIAEEADRKYEEVARKLVIIESDLERAEERAELSESKCAELEEELKTVTNNLKSLEAQAEKYSQKEDKYEEEIKVLTDKLKEAETRAEFAERSVTKLEKSIDDLEEKVAHAKEENLNMHQMLDQTLLELNNM
SIO_010081: TPM1
subclass of: SO_0000673
so part of: TPM1
location: join(1433408..1433539,1437226..1437359,1438557..1438674,1439114..1439184,1439999..1440074,1440621..1440683,1440918..1440987,1448685..1448767)
location: region:1433408-1448767:1
so has part: feature:1433408-1433539:1:exon
so has part: feature:1437226-1437359:1:exon
so has part: feature:1438557-1438674:1:exon
so has part: feature:1439114-1439184:1:exon
so has part: feature:1439999-1440074:1:exon
so has part: feature:1440621-1440683:1:exon
so has part: feature:1440918-1440987:1:exon
so has part: feature:1448685-1448767:1:exon

XP_030810745.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1433408-1433539:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1437226-1437359:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1438557-1438674:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1439114-1439184:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1439999-1440074:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1440621-1440683:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1440918-1440987:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1448685-1448767:1:exon

TPM1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 87175
gene: TPM1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: tropomyosin alpha-1 chain isoform X15
translation: MAAMSSLEAVRRKIRSLQEQADAAEERAGRLQREVDQERALREEAESEVASLNRRIQLVEEELDRAQERLATALQKLEEAEKAADESERGMKVIENRAQKDEEKMEIQEIQLKEAKHIAEEADRKYEEVARKLVIIESDLERAEERAELSESKCAELEEELKTVTNNLKSLEAQAEKYSQKEDKYEEEIKVLTDKLKEAETRAEFAERSVTKLEKSIDDLEDNFLCFSSPKTSSSGWIKHLSKLWMFHGLIVLSSSLVDSSSITCLRTCSVCALLYRNYISQCKINIPAVSLLLFLCLLFI
SIO_010081: TPM1
subclass of: SO_0000673
so part of: TPM1
location: join(1433408..1433539,1437226..1437359,1438557..1438674,1439114..1439184,1439999..1440074,1440621..1440683,1440918..1440987,1443773..1444014)
location: region:1433408-1444014:1
so has part: feature:1433408-1433539:1:exon
so has part: feature:1437226-1437359:1:exon
so has part: feature:1438557-1438674:1:exon
so has part: feature:1439114-1439184:1:exon
so has part: feature:1439999-1440074:1:exon
so has part: feature:1440621-1440683:1:exon
so has part: feature:1440918-1440987:1:exon
so has part: feature:1443773-1444014:1:exon

XP_030810752.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1433408-1433539:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1437226-1437359:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1438557-1438674:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1439114-1439184:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1439999-1440074:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1440621-1440683:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1440918-1440987:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1443773-1444014:1:exon

TPM1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 87175
gene: TPM1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: tropomyosin alpha-1 chain isoform X12
translation: MAAMSSLEAVRRKIRSLQEQADAAEERAGRLQREVDQERALREEAESEVASLNRRIQLVEEELDRAQERLATALQKLEEAEKAADESERGMKVIENRAQKDEEKMEIQEIQLKEAKHIAEEADRKYEEVARKLVIIESDLERAEERAELSESQVRQLEEQLRIMDQTLKALMAAEDKYSQKEDKYEEEIKVLTDKLKEAETRAEFAERSVTKLEKSIDDLEDELYAQKLKYKAISEELDHALNDMTSI
SIO_010081: TPM1
subclass of: SO_0000673
so part of: TPM1
location: join(1433408..1433539,1437226..1437359,1438557..1438674,1439114..1439184,1439433..1439508,1440621..1440683,1440918..1440987,1442271..1442349,1443773..1443776)
location: region:1433408-1443776:1
so has part: feature:1433408-1433539:1:exon
so has part: feature:1437226-1437359:1:exon
so has part: feature:1438557-1438674:1:exon
so has part: feature:1439114-1439184:1:exon
so has part: feature:1439433-1439508:1:exon
so has part: feature:1440621-1440683:1:exon
so has part: feature:1440918-1440987:1:exon
so has part: feature:1442271-1442349:1:exon
so has part: feature:1443773-1443776:1:exon

XP_030810749.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1433408-1433539:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1437226-1437359:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1438557-1438674:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1439114-1439184:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1439433-1439508:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1440621-1440683:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1440918-1440987:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1442271-1442349:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1443773-1443776:1:exon

TPM1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 87175
gene: TPM1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: tropomyosin alpha-1 chain isoform X10
translation: MAAMSSLEAVRRKIRSLQEQADAAEERAGRLQREVDQERALREEAESEVASLNRRIQLVEEELDRAQERLATALQKLEEAEKAADESERGMKVIENRAQKDEEKMEIQEIQLKEAKHIAEEADRKYEEVARKLVIIESDLERAEERAELSESKCAELEEELKTVTNNLKSLEAQAEKYSQKEDKYEEEIKVLTDKLKEAETRAEFAERSVTKLEKSIDDLEDELYAQKLKYKAISEELDHALNDMTSM
SIO_010081: TPM1
subclass of: SO_0000673
so part of: TPM1
location: join(1433408..1433539,1437226..1437359,1438557..1438674,1439114..1439184,1439999..1440074,1440621..1440683,1440918..1440987,1442271..1442353)
location: region:1433408-1442353:1
so has part: feature:1433408-1433539:1:exon
so has part: feature:1437226-1437359:1:exon
so has part: feature:1438557-1438674:1:exon
so has part: feature:1439114-1439184:1:exon
so has part: feature:1439999-1440074:1:exon
so has part: feature:1440621-1440683:1:exon
so has part: feature:1440918-1440987:1:exon
so has part: feature:1442271-1442353:1:exon

XP_030810747.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1433408-1433539:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1437226-1437359:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1438557-1438674:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1439114-1439184:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1439999-1440074:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1440621-1440683:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1440918-1440987:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1442271-1442353:1:exon

LACTB
type: Gene
subclass of: SO_0000704
RO_0002162: 87175
gene: LACTB
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1464492..1474862
location: region:1464492-1474862:1
so has part: feature:1464492-1474862:1:exon
subclass of: SO_0000010

115907552
type: Gene
SIO_000068: ncbigene

position:1464492:1
position: 1464492
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1474862:1
position: 1474862
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1464492-1474862:1:exon

LACTB
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 87175
gene: LACTB
product: lactamase beta
exception: unclassified transcription discrepancy
note: The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: inserted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 ESTs, 11 Proteins, and 97% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XM_030955508.1
SIO_010081: LACTB
subclass of: SO_0000673
so part of: LACTB
location: join(1464492..1464736,1465640..1465706,1467404..1467594,1467935..1468280,1469582..1469747,1471954..1474862)
location: region:1464492-1474862:1
so has part: feature:1464492-1464736:1:exon
so has part: feature:1465640-1465706:1:exon
so has part: feature:1467404-1467594:1:exon
so has part: feature:1467935-1468280:1:exon
so has part: feature:1469582-1469747:1:exon
so has part: feature:1471954-1474862:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1464492-1464736:1:exon

position:1464736:1
position: 1464736
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1465640-1465706:1:exon

position:1465640:1
position: 1465640
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1465706:1
position: 1465706
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1467404-1467594:1:exon

position:1467404:1
position: 1467404
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1467594:1
position: 1467594
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1467935-1468280:1:exon

position:1467935:1
position: 1467935
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1468280:1
position: 1468280
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1469582-1469747:1:exon

position:1469582:1
position: 1469582
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1469747:1
position: 1469747
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1471954-1474862:1:exon

position:1471954:1
position: 1471954
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LACTB
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 87175
gene: LACTB
exception: unclassified translation discrepancy
note: The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: inserted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: LOW QUALITY PROTEIN: serine beta-lactamase-like protein LACTB, mitochondrial
translation: MAGLARALRRAAAPGRLPAARRXGGGAGPRPWGWGLALGLALGVRAAPAGGEPESGREEKPPSPRGFGAAVERSRDLVRRIKDEAGIPGILVGVSVDGKEVWSEGLGYADVENRVLCKPETVMRIASISKCLTMMAVAKLWEEGKLDLDAPVQKYVPEFPEKVYEGEKVTITTRQLVSHLSGIRHYEKDITKVKEEKEKANRALKLTKSHQDKEQKAKEGKGTENTDCVKQKKEHDSETKSRNSKPGRNDKEFEQEEYYLKEKFESVIESLKIFKNDPLFFKPGSQFLYSTYGFTLLSAVVERASGQKFTDYMLKMFRDLDMLSTVLDDNEAMIYNRARCYIYNKKGRLVNAPYVDNSYKWAGGGFLSSVGDLLKFGNALLYSYQAGQFKNKNSKLLPGYLKPSTVAMMWTPVPKTEVSWDRDGKYAMAWAVVEKNQQCGCCRQQRHYASHTGGAVGASSVLLILPEELDPEAVGTWPVAPPRGVIVTIICNMQSVSLNSTALKIAREFDREKQAQCVG
SIO_010081: LACTB
subclass of: SO_0000673
so part of: LACTB
location: join(1464492..1464736,1465640..1465706,1467404..1467594,1467935..1468280,1469582..1469747,1471954..1472497)
location: region:1464492-1472497:1
so has part: feature:1464492-1464736:1:exon
so has part: feature:1465640-1465706:1:exon
so has part: feature:1467404-1467594:1:exon
so has part: feature:1467935-1468280:1:exon
so has part: feature:1469582-1469747:1:exon
so has part: feature:1471954-1472497:1:exon

XP_030811368.1
type: Protein
SIO_000068: ncbiprotein

position:1472497:1
position: 1472497
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1464492-1464736:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1465640-1465706:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1467404-1467594:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1467935-1468280:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1469582-1469747:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1471954-1472497:1:exon

RPS27L
type: Gene
subclass of: SO_0000704
RO_0002162: 87175
gene: RPS27L
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1475437..1479810)
location: region:1475437-1479810:-1
so has part: feature:1475437-1479810:-1:exon
subclass of: SO_0000010

115907553
type: Gene
SIO_000068: ncbigene

position:1475437:-1
position: 1475437
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1479810:-1
position: 1479810
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1475437-1479810:-1:exon

RPS27L
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 87175
gene: RPS27L
product: ribosomal protein S27 like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 mRNAs, 8 ESTs, 33 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
transcript id: XM_030955509.1
SIO_010081: RPS27L
subclass of: SO_0000673
so part of: RPS27L
location: complement(join(1475437..1475933,1476990..1477100,1479353..1479461,1479753..1479810))
location: region:1475437-1479810:-1
so has part: feature:1479753-1479810:-1:exon
so has part: feature:1479353-1479461:-1:exon
so has part: feature:1476990-1477100:-1:exon
so has part: feature:1475437-1475933:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1479753-1479810:-1:exon

position:1479753:-1
position: 1479753
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1479353-1479461:-1:exon

position:1479353:-1
position: 1479353
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1479461:-1
position: 1479461
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1476990-1477100:-1:exon

position:1476990:-1
position: 1476990
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1477100:-1
position: 1477100
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1475437-1475933:-1:exon

position:1475933:-1
position: 1475933
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

RPS27L
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 87175
gene: RPS27L
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: 40S ribosomal protein S27-like
translation: MPLAKDLVHPSLEDEKRKHKKKRLVQSPNSYFMDVKCPGCYKITTVFSHAQTVVLCVGCSTVLCQPTGGKARLTEGCSFRRKQH
SIO_010081: RPS27L
subclass of: SO_0000673
so part of: RPS27L
location: complement(join(1475905..1475933,1476990..1477100,1479353..1479461,1479753..1479758))
location: region:1475905-1479758:-1
so has part: feature:1479753-1479758:-1:exon
so has part: feature:1479353-1479461:-1:exon
so has part: feature:1476990-1477100:-1:exon
so has part: feature:1475905-1475933:-1:exon

XP_030811369.1
type: Protein
SIO_000068: ncbiprotein

position:1475905:-1
position: 1475905
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1479758:-1
position: 1479758
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1479753-1479758:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1479353-1479461:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1476990-1477100:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1475905-1475933:-1:exon

RAB8B
type: Gene
subclass of: SO_0000704
RO_0002162: 87175
gene: RAB8B
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1488863..1513332
location: region:1488863-1513332:1
so has part: feature:1488863-1513332:1:exon
subclass of: SO_0000010

115907306
type: Gene
SIO_000068: ncbigene

position:1488863:1
position: 1488863
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1513332:1
position: 1513332
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1488863-1513332:1:exon

RAB8B
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 87175
gene: RAB8B
product: RAB8B, member RAS oncogene family
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 15 ESTs, 33 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XM_030955120.1
SIO_010081: RAB8B
subclass of: SO_0000673
so part of: RAB8B
location: join(1488863..1489063,1504572..1504632,1505667..1505727,1507097..1507174,1507566..1507655,1508469..1508534,1510605..1510655,1511129..1513332)
location: region:1488863-1513332:1
so has part: feature:1488863-1489063:1:exon
so has part: feature:1504572-1504632:1:exon
so has part: feature:1505667-1505727:1:exon
so has part: feature:1507097-1507174:1:exon
so has part: feature:1507566-1507655:1:exon
so has part: feature:1508469-1508534:1:exon
so has part: feature:1510605-1510655:1:exon
so has part: feature:1511129-1513332:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1488863-1489063:1:exon

position:1489063:1
position: 1489063
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1504572-1504632:1:exon

position:1504572:1
position: 1504572
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1504632:1
position: 1504632
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1505667-1505727:1:exon

position:1505667:1
position: 1505667
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1505727:1
position: 1505727
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1507097-1507174:1:exon

position:1507097:1
position: 1507097
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1507174:1
position: 1507174
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1507566-1507655:1:exon

position:1507566:1
position: 1507566
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1507655:1
position: 1507655
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1508469-1508534:1:exon

position:1508469:1
position: 1508469
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1508534:1
position: 1508534
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1510605-1510655:1:exon

position:1510605:1
position: 1510605
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1510655:1
position: 1510655
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1511129-1513332:1:exon

position:1511129:1
position: 1511129
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

RAB8B
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 87175
gene: RAB8B
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: ras-related protein Rab-8B
translation: MAKTYDYLFKLLLIGDSGVGKTCLLFRFSEDAFNTTFISTIGIDFKIRTIELDGKKIKLQIWDTAGQERFRTITTAYYRGAMGIMLVYDITNEKSFDNIKNWIRNIEEHASSDVERMILGNKCDMNEKRQVSKEKGEKLAIDYGIKFLETSAKSSINVEEAFFTLARDIMTKLNRKMNDNSSSGAGGPVKITENRSKKSSFFRCTLL
SIO_010081: RAB8B
subclass of: SO_0000673
so part of: RAB8B
location: join(1488940..1489063,1504572..1504632,1505667..1505727,1507097..1507174,1507566..1507655,1508469..1508534,1510605..1510655,1511129..1511221)
location: region:1488940-1511221:1
so has part: feature:1488940-1489063:1:exon
so has part: feature:1504572-1504632:1:exon
so has part: feature:1505667-1505727:1:exon
so has part: feature:1507097-1507174:1:exon
so has part: feature:1507566-1507655:1:exon
so has part: feature:1508469-1508534:1:exon
so has part: feature:1510605-1510655:1:exon
so has part: feature:1511129-1511221:1:exon

XP_030810980.1
type: Protein
SIO_000068: ncbiprotein

position:1488940:1
position: 1488940
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1511221:1
position: 1511221
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1488940-1489063:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1504572-1504632:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1505667-1505727:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1507097-1507174:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1507566-1507655:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1508469-1508534:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1510605-1510655:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1511129-1511221:1:exon

TRNAG-UCC
type: Gene
subclass of: SO_0000704
RO_0002162: 87175
gene: TRNAG-UCC
note: Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
so part of: sequence
location: 1526527..1526598
location: region:1526527-1526598:1
so has part: feature:1526527-1526598:1:exon
subclass of: SO_0000663

115907677
type: Gene
SIO_000068: ncbigene

position:1526527:1
position: 1526527
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1526598:1
position: 1526598
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1526527-1526598:1:exon

TRNAG-UCC
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 87175
gene: TRNAG-UCC
product: tRNA-Gly
inference: COORDINATES: profile:tRNAscan-SE:1.23
note: transfer RNA glycine (anticodon UCC); Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
anticodon: (pos:1526560..1526562,aa:Gly,seq:tcc)
SIO_010081: TRNAG-UCC
subclass of: SO_0000673
so part of: TRNAG-UCC
location: 1526527..1526598
location: region:1526527-1526598:1
so has part: feature:1526527-1526598:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1526527-1526598:1:exon

TRNAM-CAU
type: Gene
subclass of: SO_0000704
RO_0002162: 87175
gene: TRNAM-CAU
note: Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
so part of: sequence
location: 1529378..1529449
location: region:1529378-1529449:1
so has part: feature:1529378-1529449:1:exon
subclass of: SO_0000663

115907681
type: Gene
SIO_000068: ncbigene

position:1529378:1
position: 1529378
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1529449:1
position: 1529449
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1529378-1529449:1:exon

TRNAM-CAU
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 87175
gene: TRNAM-CAU
product: tRNA-Met
inference: COORDINATES: profile:tRNAscan-SE:1.23
note: transfer RNA methionine (anticodon CAU); Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
anticodon: (pos:1529410..1529412,aa:Met,seq:cat)
SIO_010081: TRNAM-CAU
subclass of: SO_0000673
so part of: TRNAM-CAU
location: 1529378..1529449
location: region:1529378-1529449:1
so has part: feature:1529378-1529449:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1529378-1529449:1:exon

TRNAI-AAU
type: Gene
subclass of: SO_0000704
RO_0002162: 87175
gene: TRNAI-AAU
note: Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
so part of: sequence
location: 1529530..1529603
location: region:1529530-1529603:1
so has part: feature:1529530-1529603:1:exon
subclass of: SO_0000663

115907682
type: Gene
SIO_000068: ncbigene

position:1529530:1
position: 1529530
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1529603:1
position: 1529603
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1529530-1529603:1:exon

TRNAI-AAU
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 87175
gene: TRNAI-AAU
product: tRNA-Ile
inference: COORDINATES: profile:tRNAscan-SE:1.23
note: transfer RNA isoleucine (anticodon AAU); Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
anticodon: (pos:1529564..1529566,aa:Ile,seq:aat)
SIO_010081: TRNAI-AAU
subclass of: SO_0000673
so part of: TRNAI-AAU
location: 1529530..1529603
location: region:1529530-1529603:1
so has part: feature:1529530-1529603:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1529530-1529603:1:exon

LOC115907614
type: Gene
subclass of: SO_0000704
RO_0002162: 87175
gene: LOC115907614
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1532073..1539884)
location: region:1532073-1539884:-1
so has part: feature:1532073-1539884:-1:exon
subclass of: SO_0000010

115907614
type: Gene
SIO_000068: ncbigene

position:1532073:-1
position: 1532073
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1539884:-1
position: 1539884
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1532073-1539884:-1:exon

LOC115907614
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 87175
gene: LOC115907614
product: mitotic-spindle organizing protein 2B-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 mRNAs, 17 ESTs, 13 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
transcript id: XM_030955600.1
SIO_010081: LOC115907614
subclass of: SO_0000673
so part of: LOC115907614
location: complement(join(1532073..1532348,1539496..1539638,1539720..1539884))
location: region:1532073-1539884:-1
so has part: feature:1539720-1539884:-1:exon
so has part: feature:1539496-1539638:-1:exon
so has part: feature:1532073-1532348:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1539720-1539884:-1:exon

position:1539720:-1
position: 1539720
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1539496-1539638:-1:exon

position:1539496:-1
position: 1539496
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1539638:-1
position: 1539638
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1532073-1532348:-1:exon

position:1532348:-1
position: 1532348
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC115907614
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 87175
gene: LOC115907614
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: mitotic-spindle organizing protein 2B-like
translation: MSEGPAGMAAPAAMAETRLRRKQLLSAEEAELFELAQAAGSGLDPEVFRVLLDLLRMNVAPLAVFQVLKSMCAGQRLPPAAESGPAAPAPIPADSRGRNKSSSAVGGSQILAERSSREGSAQRMPRQPSASRVQKAATSGKSSGGGNST
SIO_010081: LOC115907614
subclass of: SO_0000673
so part of: LOC115907614
location: complement(join(1532188..1532348,1539496..1539638,1539720..1539865))
location: region:1532188-1539865:-1
so has part: feature:1539720-1539865:-1:exon
so has part: feature:1539496-1539638:-1:exon
so has part: feature:1532188-1532348:-1:exon

XP_030811460.1
type: Protein
SIO_000068: ncbiprotein

position:1532188:-1
position: 1532188
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1539865:-1
position: 1539865
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1539720-1539865:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1539496-1539638:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1532188-1532348:-1:exon

SHF
type: Gene
subclass of: SO_0000704
RO_0002162: 87175
gene: SHF
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1543120..1563645)
location: region:1543120-1563645:-1
so has part: feature:1543120-1563645:-1:exon
subclass of: SO_0000010

115907596
type: Gene
SIO_000068: ncbigene

position:1543120:-1
position: 1543120
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1563645:-1
position: 1563645
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1543120-1563645:-1:exon

SHF
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 87175
gene: SHF
product: Src homology 2 domain containing F, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 ESTs, 8 Proteins, and 95% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
transcript id: XM_030955574.1
SIO_010081: SHF
subclass of: SO_0000673
so part of: SHF
location: complement(join(1543120..1545722,1548808..1548927,1550378..1550549,1553350..1553478,1554995..1555204,1556156..1556285,1563175..1563645))
location: region:1543120-1563645:-1
so has part: feature:1563175-1563645:-1:exon
so has part: feature:1556156-1556285:-1:exon
so has part: feature:1554995-1555204:-1:exon
so has part: feature:1553350-1553478:-1:exon
so has part: feature:1550378-1550549:-1:exon
so has part: feature:1548808-1548927:-1:exon
so has part: feature:1543120-1545722:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1563175-1563645:-1:exon

position:1563175:-1
position: 1563175
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1556156-1556285:-1:exon

position:1556156:-1
position: 1556156
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1556285:-1
position: 1556285
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1554995-1555204:-1:exon

position:1554995:-1
position: 1554995
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1555204:-1
position: 1555204
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1553350-1553478:-1:exon

position:1553350:-1
position: 1553350
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1553478:-1
position: 1553478
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1550378-1550549:-1:exon

position:1550378:-1
position: 1550378
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1550549:-1
position: 1550549
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1548808-1548927:-1:exon

position:1548808:-1
position: 1548808
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1548927:-1
position: 1548927
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1543120-1545722:-1:exon

position:1545722:-1
position: 1545722
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

SHF
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 87175
gene: SHF
product: Src homology 2 domain containing F, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 ESTs, 5 Proteins, and 97% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
transcript id: XM_030955575.1
SIO_010081: SHF
subclass of: SO_0000673
so part of: SHF
location: complement(join(1543120..1545722,1548808..1548927,1550378..1550549,1554995..1555204,1556156..1556285,1563175..1563558))
location: region:1543120-1563558:-1
so has part: feature:1563175-1563558:-1:exon
so has part: feature:1556156-1556285:-1:exon
so has part: feature:1554995-1555204:-1:exon
so has part: feature:1550378-1550549:-1:exon
so has part: feature:1548808-1548927:-1:exon
so has part: feature:1543120-1545722:-1:exon

position:1563558:-1
position: 1563558
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1563175-1563558:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1556156-1556285:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1554995-1555204:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1550378-1550549:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1548808-1548927:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1543120-1545722:-1:exon

SHF
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 87175
gene: SHF
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: SH2 domain-containing adapter protein F isoform X1
translation: MLLSGAAGSERGGCSGGAGAGGAPQCVGTMARWLREHLGFRSARPAPPAPPKPDYRAGPPPQPPLPPGGAAEPLATAQPDIVAAYRLQKERDFEDPYSGPPPAAAPDGPRYVSPKHRLIKVEAVEKVPASPSPPPPVPVAPSSPLAGPEPPDEPPQELAVLEDYADPFDAAQVAGSQAGLEKVMENDGYMEPYEAQKMMAEIRQKGLREAPARPLPLYDTPYEPVLDMDSDCSACPRPRESRLPEDDERPPEEYDQPWEWKKERISKAFAVEIKVIKDLPWPPPVGQLDSSESPPDGEPGAPLPAQHSYEDANGPSEGLGYGRTSPCREEKAKAVLRHGSSSLKNTKTLTAEPGPFVGERIDPALPLESQCWYHGAISRTDAETLLRLCKEASYLVRNSETSKNDFSLSLKSSQGFMHMKLSRTQENKYVLGQHSPPFDSVPEIIHHYASRKLPIKGAEHMSLLYPVAIRTL
SIO_010081: SHF
subclass of: SO_0000673
so part of: SHF
location: complement(join(1545536..1545722,1548808..1548927,1550378..1550549,1553350..1553478,1554995..1555204,1556156..1556285,1563175..1563645))
location: region:1545536-1563645:-1
so has part: feature:1563175-1563645:-1:exon
so has part: feature:1556156-1556285:-1:exon
so has part: feature:1554995-1555204:-1:exon
so has part: feature:1553350-1553478:-1:exon
so has part: feature:1550378-1550549:-1:exon
so has part: feature:1548808-1548927:-1:exon
so has part: feature:1545536-1545722:-1:exon

XP_030811434.1
type: Protein
SIO_000068: ncbiprotein

position:1545536:-1
position: 1545536
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1563175-1563645:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1556156-1556285:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1554995-1555204:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1553350-1553478:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1550378-1550549:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1548808-1548927:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1545536-1545722:-1:exon

SHF
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 87175
gene: SHF
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: SH2 domain-containing adapter protein F isoform X2
translation: MARWLREHLGFRSARPAPPAPPKPDYRAGPPPQPPLPPGGAAEPLATAQPDIVAAYRLQKERDFEDPYSGPPPAAAPDGPRYVSPKHRLIKVEAVEKVPASPSPPPPVPVAPSSPLAGPEPPDEPPQELAVLEDYADPFDAAQVAGSQAGLEKVMENDGYMEPYEAQKMMAEIRQKGLREAPARPLPLYDTPYEPVLDMDSDCSACPRPRESRLPEDDERPPEEYDQPWEWKKERISKAFAGPSEGLGYGRTSPCREEKAKAVLRHGSSSLKNTKTLTAEPGPFVGERIDPALPLESQCWYHGAISRTDAETLLRLCKEASYLVRNSETSKNDFSLSLKSSQGFMHMKLSRTQENKYVLGQHSPPFDSVPEIIHHYASRKLPIKGAEHMSLLYPVAIRTL
SIO_010081: SHF
subclass of: SO_0000673
so part of: SHF
location: complement(join(1545536..1545722,1548808..1548927,1550378..1550549,1554995..1555204,1556156..1556285,1563175..1563558))
location: region:1545536-1563558:-1
so has part: feature:1563175-1563558:-1:exon
so has part: feature:1556156-1556285:-1:exon
so has part: feature:1554995-1555204:-1:exon
so has part: feature:1550378-1550549:-1:exon
so has part: feature:1548808-1548927:-1:exon
so has part: feature:1545536-1545722:-1:exon

XP_030811435.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1563175-1563558:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1556156-1556285:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1554995-1555204:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1550378-1550549:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1548808-1548927:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1545536-1545722:-1:exon

TRNAH-GUG
type: Gene
subclass of: SO_0000704
RO_0002162: 87175
gene: TRNAH-GUG
note: Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
so part of: sequence
location: 1574482..1574553
location: region:1574482-1574553:1
so has part: feature:1574482-1574553:1:exon
subclass of: SO_0000663

115907683
type: Gene
SIO_000068: ncbigene

position:1574482:1
position: 1574482
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1574553:1
position: 1574553
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1574482-1574553:1:exon

TRNAH-GUG
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 87175
gene: TRNAH-GUG
product: tRNA-His
inference: COORDINATES: profile:tRNAscan-SE:1.23
note: transfer RNA histidin (anticodon GUG); Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
anticodon: (pos:1574515..1574517,aa:His,seq:gtg)
SIO_010081: TRNAH-GUG
subclass of: SO_0000673
so part of: TRNAH-GUG
location: 1574482..1574553
location: region:1574482-1574553:1
so has part: feature:1574482-1574553:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1574482-1574553:1:exon

TRNAH-GUG
type: Gene
subclass of: SO_0000704
RO_0002162: 87175
gene: TRNAH-GUG
note: Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
so part of: sequence
location: complement(1575449..1575520)
location: region:1575449-1575520:-1
so has part: feature:1575449-1575520:-1:exon
subclass of: SO_0000663

115907684
type: Gene
SIO_000068: ncbigene

position:1575449:-1
position: 1575449
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1575520:-1
position: 1575520
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1575449-1575520:-1:exon

TRNAH-GUG
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 87175
gene: TRNAH-GUG
product: tRNA-His
inference: COORDINATES: profile:tRNAscan-SE:1.23
note: transfer RNA histidin (anticodon GUG); Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
anticodon: (pos:complement(1575485..1575487),aa:His, seq:gtg)
SIO_010081: TRNAH-GUG
subclass of: SO_0000673
so part of: TRNAH-GUG
location: complement(1575449..1575520)
location: region:1575449-1575520:-1
so has part: feature:1575449-1575520:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1575449-1575520:-1:exon

LOC115907492
type: Gene
subclass of: SO_0000704
RO_0002162: 87175
gene: LOC115907492
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1576796..1587101
location: region:1576796-1587101:1
so has part: feature:1576796-1587101:1:exon
subclass of: SO_0000010

115907492
type: Gene
SIO_000068: ncbigene

position:1576796:1
position: 1576796
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1587101:1
position: 1587101
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1576796-1587101:1:exon

LOC115907492
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 87175
gene: LOC115907492
product: sodium/nucleoside cotransporter 1-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 27 Proteins, and 28% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_030955434.1
SIO_010081: LOC115907492
subclass of: SO_0000673
so part of: LOC115907492
location: join(1576796..1576917,1577676..1577798,1578977..1579103,1579233..1579327,1579657..1579748,1580134..1580323,1580641..1580782,1581513..1581626,1581991..1582068,1582392..1582472,1582806..1582886,1583027..1583152,1584331..1584461,1584650..1584818,1584994..1585191,1585681..1585762,1586234..1586332,1586773..1586884,1586978..1587101)
location: region:1576796-1587101:1
so has part: feature:1576796-1576917:1:exon
so has part: feature:1577676-1577798:1:exon
so has part: feature:1578977-1579103:1:exon
so has part: feature:1579233-1579327:1:exon
so has part: feature:1579657-1579748:1:exon
so has part: feature:1580134-1580323:1:exon
so has part: feature:1580641-1580782:1:exon
so has part: feature:1581513-1581626:1:exon
so has part: feature:1581991-1582068:1:exon
so has part: feature:1582392-1582472:1:exon
so has part: feature:1582806-1582886:1:exon
so has part: feature:1583027-1583152:1:exon
so has part: feature:1584331-1584461:1:exon
so has part: feature:1584650-1584818:1:exon
so has part: feature:1584994-1585191:1:exon
so has part: feature:1585681-1585762:1:exon
so has part: feature:1586234-1586332:1:exon
so has part: feature:1586773-1586884:1:exon
so has part: feature:1586978-1587101:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1576796-1576917:1:exon

position:1576917:1
position: 1576917
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1577676-1577798:1:exon

position:1577676:1
position: 1577676
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1577798:1
position: 1577798
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1578977-1579103:1:exon

position:1578977:1
position: 1578977
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1579103:1
position: 1579103
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1579233-1579327:1:exon

position:1579233:1
position: 1579233
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1579327:1
position: 1579327
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1579657-1579748:1:exon

position:1579657:1
position: 1579657
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1579748:1
position: 1579748
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1580134-1580323:1:exon

position:1580134:1
position: 1580134
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1580323:1
position: 1580323
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1580641-1580782:1:exon

position:1580641:1
position: 1580641
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1580782:1
position: 1580782
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1581513-1581626:1:exon

position:1581513:1
position: 1581513
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1581626:1
position: 1581626
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:1581991-1582068:1:exon

position:1581991:1
position: 1581991
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1582068:1
position: 1582068
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:1582392-1582472:1:exon

position:1582392:1
position: 1582392
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1582472:1
position: 1582472
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:1582806-1582886:1:exon

position:1582806:1
position: 1582806
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1582886:1
position: 1582886
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:1583027-1583152:1:exon

position:1583027:1
position: 1583027
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1583152:1
position: 1583152
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:1584331-1584461:1:exon

position:1584331:1
position: 1584331
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1584461:1
position: 1584461
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:1584650-1584818:1:exon

position:1584650:1
position: 1584650
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1584818:1
position: 1584818
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:1584994-1585191:1:exon

position:1584994:1
position: 1584994
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1585191:1
position: 1585191
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:1585681-1585762:1:exon

position:1585681:1
position: 1585681
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1585762:1
position: 1585762
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:1586234-1586332:1:exon

position:1586234:1
position: 1586234
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1586332:1
position: 1586332
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:1586773-1586884:1:exon

position:1586773:1
position: 1586773
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1586884:1
position: 1586884
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:1586978-1587101:1:exon

position:1586978:1
position: 1586978
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC115907492
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 87175
gene: LOC115907492
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: sodium/nucleoside cotransporter 1-like
translation: MGNRTRARELRAGGADGECRGTAVPGRGSREDTEGTRPPGVALQFSSKQRQHLTASVLTQKCFYSQSLPRLRLSALPSSFSSQHRALPGFPVYTEARELLEMEGNQITLDSLDKGTDNPAFSFEGENRHYEECGGPRSENQEERRERKGRFSTYCRKALQPASKAQHFCKAHAKVLRRVVLGLLVVAYLCYFIAACYLNFQRALPLVVITAVVVFFICWEVFQKHCGAKVLLLLRPVGKCFQKAWPWLKWLLWVALLAGLIVWLVLDTGRNPEQLISLGGFCFLVLFLFACSKHHGAVSWRVVFWGLGLEFLLGLFVLRTTPGTQAFQWLGDQVQYFLGYTTAGSSFVFGNTLIEEVFAFQTLPIIVFFSCVMSILYYLGVMQWLILKISWVLQISMGTTPTETLSVAGNIFVGQTEAPLLIRPYLADMTLSEIHSVMTGGFATIAGSVMGAYISFGIDAASLIAASVMAAPCALGMAKLVYPEVEESKFKGKASIRISRGEEQNILEAASNGAANSVGLVANIAANLIGFLAVLEFINAALRWFGKMVDIEGLTFQVICSYVLMPLAFLMGADWADSPLVAELLGIKIFLNEFVAYQQLATYKKNRLMGLEEWDGSRKQWISERAESITTFALCGFANLSSLGITLGGLSSMVPQRKSDLAAVVLRALLTGMCVSMLNACLAGLLYVPTEVGDCAMFFSTTNFSSTSYTMYTCCKQLFASSVLQNGTLSFTGSWAEQAGSVLWLKECCAYYNHTSCAWTF
SIO_010081: LOC115907492
subclass of: SO_0000673
so part of: LOC115907492
location: join(1576796..1576917,1577676..1577798,1578977..1579103,1579233..1579327,1579657..1579748,1580134..1580323,1580641..1580782,1581513..1581626,1581991..1582068,1582392..1582472,1582806..1582886,1583027..1583152,1584331..1584461,1584650..1584818,1584994..1585191,1585681..1585762,1586234..1586332,1586773..1586884,1586978..1587101)
location: region:1576796-1587101:1
so has part: feature:1576796-1576917:1:exon
so has part: feature:1577676-1577798:1:exon
so has part: feature:1578977-1579103:1:exon
so has part: feature:1579233-1579327:1:exon
so has part: feature:1579657-1579748:1:exon
so has part: feature:1580134-1580323:1:exon
so has part: feature:1580641-1580782:1:exon
so has part: feature:1581513-1581626:1:exon
so has part: feature:1581991-1582068:1:exon
so has part: feature:1582392-1582472:1:exon
so has part: feature:1582806-1582886:1:exon
so has part: feature:1583027-1583152:1:exon
so has part: feature:1584331-1584461:1:exon
so has part: feature:1584650-1584818:1:exon
so has part: feature:1584994-1585191:1:exon
so has part: feature:1585681-1585762:1:exon
so has part: feature:1586234-1586332:1:exon
so has part: feature:1586773-1586884:1:exon
so has part: feature:1586978-1587101:1:exon

XP_030811294.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1576796-1576917:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1577676-1577798:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1578977-1579103:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1579233-1579327:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1579657-1579748:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1580134-1580323:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1580641-1580782:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1581513-1581626:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1581991-1582068:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1582392-1582472:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1582806-1582886:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1583027-1583152:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1584331-1584461:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1584650-1584818:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1584994-1585191:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1585681-1585762:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1586234-1586332:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:1586773-1586884:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:1586978-1587101:1:exon

ALPK3
type: Gene
subclass of: SO_0000704
RO_0002162: 87175
gene: ALPK3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1587692..1620628)
location: region:1587692-1620628:-1
so has part: feature:1587692-1620628:-1:exon
subclass of: SO_0000010

115907370
type: Gene
SIO_000068: ncbigene

position:1587692:-1
position: 1587692
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1620628:-1
position: 1620628
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1587692-1620628:-1:exon

ALPK3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 87175
gene: ALPK3
product: alpha kinase 3, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 3 ESTs, 6 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_030955229.1
SIO_010081: ALPK3
subclass of: SO_0000673
so part of: ALPK3
location: complement(join(1587692..1589118,1589269..1589317,1589514..1589731,1589967..1590055,1590383..1590657,1590775..1590810,1591070..1591197,1592267..1592414,1593261..1595103,1598869..1599868,1600873..1600990,1607545..1607666,1610854..1610892,1620450..1620628))
location: region:1587692-1620628:-1
so has part: feature:1620450-1620628:-1:exon
so has part: feature:1610854-1610892:-1:exon
so has part: feature:1607545-1607666:-1:exon
so has part: feature:1600873-1600990:-1:exon
so has part: feature:1598869-1599868:-1:exon
so has part: feature:1593261-1595103:-1:exon
so has part: feature:1592267-1592414:-1:exon
so has part: feature:1591070-1591197:-1:exon
so has part: feature:1590775-1590810:-1:exon
so has part: feature:1590383-1590657:-1:exon
so has part: feature:1589967-1590055:-1:exon
so has part: feature:1589514-1589731:-1:exon
so has part: feature:1589269-1589317:-1:exon
so has part: feature:1587692-1589118:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1620450-1620628:-1:exon

position:1620450:-1
position: 1620450
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1610854-1610892:-1:exon

position:1610854:-1
position: 1610854
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1610892:-1
position: 1610892
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1607545-1607666:-1:exon

position:1607545:-1
position: 1607545
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1607666:-1
position: 1607666
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1600873-1600990:-1:exon

position:1600873:-1
position: 1600873
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1600990:-1
position: 1600990
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1598869-1599868:-1:exon

position:1598869:-1
position: 1598869
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1599868:-1
position: 1599868
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1593261-1595103:-1:exon

position:1593261:-1
position: 1593261
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1595103:-1
position: 1595103
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1592267-1592414:-1:exon

position:1592267:-1
position: 1592267
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1592414:-1
position: 1592414
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1591070-1591197:-1:exon

position:1591070:-1
position: 1591070
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1591197:-1
position: 1591197
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:1590775-1590810:-1:exon

position:1590775:-1
position: 1590775
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1590810:-1
position: 1590810
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:1590383-1590657:-1:exon

position:1590383:-1
position: 1590383
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1590657:-1
position: 1590657
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:1589967-1590055:-1:exon

position:1589967:-1
position: 1589967
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1590055:-1
position: 1590055
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:1589514-1589731:-1:exon

position:1589514:-1
position: 1589514
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1589731:-1
position: 1589731
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:1589269-1589317:-1:exon

position:1589269:-1
position: 1589269
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1589317:-1
position: 1589317
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:1587692-1589118:-1:exon

position:1589118:-1
position: 1589118
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

ALPK3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 87175
gene: ALPK3
product: alpha kinase 3, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 ESTs, 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_030955228.1
SIO_010081: ALPK3
subclass of: SO_0000673
so part of: ALPK3
location: complement(join(1587692..1589118,1589269..1589317,1589514..1589731,1589967..1590055,1590383..1590657,1590775..1590810,1591070..1591197,1592267..1592414,1593261..1595103,1598869..1599868,1600873..1600990,1607545..1607666,1620450..1620615))
location: region:1587692-1620615:-1
so has part: feature:1620450-1620615:-1:exon
so has part: feature:1607545-1607666:-1:exon
so has part: feature:1600873-1600990:-1:exon
so has part: feature:1598869-1599868:-1:exon
so has part: feature:1593261-1595103:-1:exon
so has part: feature:1592267-1592414:-1:exon
so has part: feature:1591070-1591197:-1:exon
so has part: feature:1590775-1590810:-1:exon
so has part: feature:1590383-1590657:-1:exon
so has part: feature:1589967-1590055:-1:exon
so has part: feature:1589514-1589731:-1:exon
so has part: feature:1589269-1589317:-1:exon
so has part: feature:1587692-1589118:-1:exon

position:1620615:-1
position: 1620615
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1620450-1620615:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1607545-1607666:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1600873-1600990:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1598869-1599868:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1593261-1595103:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1592267-1592414:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1591070-1591197:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1590775-1590810:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1590383-1590657:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1589967-1590055:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1589514-1589731:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1589269-1589317:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1587692-1589118:-1:exon

ALPK3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 87175
gene: ALPK3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: alpha-protein kinase 3 isoform X1
translation: MSSTRRALAGLYGRGASHIDGAEEAESAAWASRPDRRSYLLGIRPQNRSTFCAIISQLTEETQPLFETTIKSRAVSEDSDAKFTCIVTGYPQPEVTWYKDDEEMDRYCGLPKYEIFRHGNRHTLQLYKCREEDAGIYQASARNNKGIVSCSGVLEVGTMTEFKIHQKWFDKIKRKAEEKMQEIEQGKKRGKENVEVEKLQGMSPERLQRKRRLARDQNLRSGDSSWEKEDTAKVHVADSQSRLHKDIAETKEQPLSAVPGFPNKLVAPLKAEVTTNGDATLESGEENGNSFLTYIYETVEDLATKPGAKDSAAKKKKKVEAPSAPKQEVSKREESGRDRANQSSNPRFAPPVPLRRNARLRAASDQEVETSPKLKEPGKAVKQDIKPNDDMYFSLKDMYFDKQVKPAAGKEEVGAKDEAGSQAVLQPVAASRQTEDAPLASEVLEGQRGQQQEQKLEGNKEVAARVGQSPGDLKHPVSSPTKETSQQGSKLEEVRNEVPVCQETRGAVKRTNPRFRPQEPPKPPARSPDHVQSGKEHPPPRKQAERHSHALEGRETQQGLLNQENNSQGGEESLLKNLTPPEPGENTPLEQTPCQTVKDGKSKEAGAELSGSHPGVRTGGSEAAEPCLGAVHREAAGTPLGHQNTQNEMAAPAAVPLAEEEPLPAPAVRPSVAQEALLASHRSPGMEATAGEVPSGAQLLPPARGGTEITRTGGSSPREMFSAITSEEENAKPVPVGPQGKEGGLLTATAPCQEPAASSGTWEGVSEVQPQVPLVLSSSERSQEMSVEEKMQHKNLVSSLKNYLLLLLKMSDSSKDATKGDTDSGDKEQPNAGEGMIPEIGIAGLSPRTSRKVLEKVQNNQLFQTAENLPLTPRTSRRITGMINEEFVTSQEMLACRPVPPKRRTWGAPEAEGPPPLSVPSIVVGSMPTAEVAPHLSDLPPVSSEESPADPLAVLPCATPEELALGARRKIYLPKPKQVGVEEEASPESVGHTRSPTVSPRQSRKNASLLHSPAPAPSSPSEQCSPTLTRKMATLEVPKLYEEPAGDTGGDKEVPGDAKPEAQPAESQSTNNPFKAPQVVRKIRAEQFSDASGNLKLWCQFFNILSDSKLTWYKDEIPVAEAQRSAGDEGQAALAVVQASQKDCGVYRCVISNEYGTDSTDFLLSPEVLSGFILREEIEVGEEIEMTPMVFAKGLADAGYWGDKLFGRVVSEDLEVGAGFLRKACRARAIYGLEPVFESGHTCVIKVHNFIVFGTKNENSLIEKNYDITIQECKVQNSSREYCKIFAAEARAVPDFGAVPEIIPLYLIYRPANNIPYATMEEDLGRPCEQYCVTERDGSLVARGTSEIVLKCCTFQHWVYQWTNGNILVTDMEGVGWKLTNVRIATNLKGYQGLKESCFPSLLEQFPAAHKCNHYCSILGLKMLEPAKPKGSKSPCLGRKSAQSSPQLQKKVLTSPQSTRKASVSPKSSRRAAETGEASTACRSRSGESNRAGCPQ
SIO_010081: ALPK3
subclass of: SO_0000673
so part of: ALPK3
location: complement(join(1588797..1589118,1589269..1589317,1589514..1589731,1589967..1590055,1590383..1590657,1590775..1590810,1591070..1591197,1592267..1592414,1593261..1595103,1598869..1599868,1600873..1600990,1607545..1607666,1620450..1620592))
location: region:1588797-1620592:-1
so has part: feature:1620450-1620592:-1:exon
so has part: feature:1607545-1607666:-1:exon
so has part: feature:1600873-1600990:-1:exon
so has part: feature:1598869-1599868:-1:exon
so has part: feature:1593261-1595103:-1:exon
so has part: feature:1592267-1592414:-1:exon
so has part: feature:1591070-1591197:-1:exon
so has part: feature:1590775-1590810:-1:exon
so has part: feature:1590383-1590657:-1:exon
so has part: feature:1589967-1590055:-1:exon
so has part: feature:1589514-1589731:-1:exon
so has part: feature:1589269-1589317:-1:exon
so has part: feature:1588797-1589118:-1:exon

XP_030811088.1
type: Protein
SIO_000068: ncbiprotein

position:1588797:-1
position: 1588797
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1620592:-1
position: 1620592
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1620450-1620592:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1607545-1607666:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1600873-1600990:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1598869-1599868:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1593261-1595103:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1592267-1592414:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1591070-1591197:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1590775-1590810:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1590383-1590657:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1589967-1590055:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1589514-1589731:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1589269-1589317:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1588797-1589118:-1:exon

ALPK3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 87175
gene: ALPK3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: alpha-protein kinase 3 isoform X2
translation: MSSTRRALAGLYGRGASHIDGAEEAESAAWASRPDRRSYLLGIRPQNSLSSSRFSPSSLGRSTFCAIISQLTEETQPLFETTIKSRAVSEDSDAKFTCIVTGYPQPEVTWYKDDEEMDRYCGLPKYEIFRHGNRHTLQLYKCREEDAGIYQASARNNKGIVSCSGVLEVGTMTEFKIHQKWFDKIKRKAEEKMQEIEQGKKRGKENVEVEKLQGMSPERLQRKRRLARDQNLRSGDSSWEKEDTAKVHVADSQSRLHKDIAETKEQPLSAVPGFPNKLVAPLKAEVTTNGDATLESGEENGNSFLTYIYETVEDLATKPGAKDSAAKKKKKVEAPSAPKQEVSKREESGRDRANQSSNPRFAPPVPLRRNARLRAASDQEVETSPKLKEPGKAVKQDIKPNDDMYFSLKDMYFDKQVKPAAGKEEVGAKDEAGSQAVLQPVAASRQTEDAPLASEVLEGQRGQQQEQKLEGNKEVAARVGQSPGDLKHPVSSPTKETSQQGSKLEEVRNEVPVCQETRGAVKRTNPRFRPQEPPKPPARSPDHVQSGKEHPPPRKQAERHSHALEGRETQQGLLNQENNSQGGEESLLKNLTPPEPGENTPLEQTPCQTVKDGKSKEAGAELSGSHPGVRTGGSEAAEPCLGAVHREAAGTPLGHQNTQNEMAAPAAVPLAEEEPLPAPAVRPSVAQEALLASHRSPGMEATAGEVPSGAQLLPPARGGTEITRTGGSSPREMFSAITSEEENAKPVPVGPQGKEGGLLTATAPCQEPAASSGTWEGVSEVQPQVPLVLSSSERSQEMSVEEKMQHKNLVSSLKNYLLLLLKMSDSSKDATKGDTDSGDKEQPNAGEGMIPEIGIAGLSPRTSRKVLEKVQNNQLFQTAENLPLTPRTSRRITGMINEEFVTSQEMLACRPVPPKRRTWGAPEAEGPPPLSVPSIVVGSMPTAEVAPHLSDLPPVSSEESPADPLAVLPCATPEELALGARRKIYLPKPKQVGVEEEASPESVGHTRSPTVSPRQSRKNASLLHSPAPAPSSPSEQCSPTLTRKMATLEVPKLYEEPAGDTGGDKEVPGDAKPEAQPAESQSTNNPFKAPQVVRKIRAEQFSDASGNLKLWCQFFNILSDSKLTWYKDEIPVAEAQRSAGDEGQAALAVVQASQKDCGVYRCVISNEYGTDSTDFLLSPEVLSGFILREEIEVGEEIEMTPMVFAKGLADAGYWGDKLFGRVVSEDLEVGAGFLRKACRARAIYGLEPVFESGHTCVIKVHNFIVFGTKNENSLIEKNYDITIQECKVQNSSREYCKIFAAEARAVPDFGAVPEIIPLYLIYRPANNIPYATMEEDLGRPCEQYCVTERDGSLVARGTSEIVLKCCTFQHWVYQWTNGNILVTDMEGVGWKLTNVRIATNLKGYQGLKESCFPSLLEQFPAAHKCNHYCSILGLKMLEPAKPKGSKSPCLGRKSAQSSPQLQKKVLTSPQSTRKASVSPKSSRRAAETGEASTACRSRSGESNRAGCPQ
SIO_010081: ALPK3
subclass of: SO_0000673
so part of: ALPK3
location: complement(join(1588797..1589118,1589269..1589317,1589514..1589731,1589967..1590055,1590383..1590657,1590775..1590810,1591070..1591197,1592267..1592414,1593261..1595103,1598869..1599868,1600873..1600990,1607545..1607666,1610854..1610892,1620450..1620592))
location: region:1588797-1620592:-1
so has part: feature:1620450-1620592:-1:exon
so has part: feature:1610854-1610892:-1:exon
so has part: feature:1607545-1607666:-1:exon
so has part: feature:1600873-1600990:-1:exon
so has part: feature:1598869-1599868:-1:exon
so has part: feature:1593261-1595103:-1:exon
so has part: feature:1592267-1592414:-1:exon
so has part: feature:1591070-1591197:-1:exon
so has part: feature:1590775-1590810:-1:exon
so has part: feature:1590383-1590657:-1:exon
so has part: feature:1589967-1590055:-1:exon
so has part: feature:1589514-1589731:-1:exon
so has part: feature:1589269-1589317:-1:exon
so has part: feature:1588797-1589118:-1:exon

XP_030811089.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1620450-1620592:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1610854-1610892:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1607545-1607666:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1600873-1600990:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1598869-1599868:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1593261-1595103:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1592267-1592414:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1591070-1591197:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1590775-1590810:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1590383-1590657:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1589967-1590055:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1589514-1589731:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1589269-1589317:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1588797-1589118:-1:exon

LOC115907402
type: Gene
subclass of: SO_0000704
RO_0002162: 87175
gene: LOC115907402
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1626555..1649903
location: region:1626555-1649903:1
so has part: feature:1626555-1649903:1:exon
subclass of: SO_0000010

115907402
type: Gene
SIO_000068: ncbigene

position:1626555:1
position: 1626555
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1649903:1
position: 1649903
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1626555-1649903:1:exon

LOC115907402
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 87175
gene: LOC115907402
product: mucosa-associated lymphoid tissue lymphoma translocation protein 1 homolog, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, 2 Proteins, and 98% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XM_030955290.1
SIO_010081: LOC115907402
subclass of: SO_0000673
so part of: LOC115907402
location: join(1626555..1626667,1627001..1627119,1627301..1627454,1627915..1628093,1628996..1629092,1630720..1630746,1631494..1631697,1635894..1636071,1639458..1639532,1640126..1640253,1640502..1640633,1640758..1640906,1645395..1645520,1647847..1649903)
location: region:1626555-1649903:1
so has part: feature:1626555-1626667:1:exon
so has part: feature:1627001-1627119:1:exon
so has part: feature:1627301-1627454:1:exon
so has part: feature:1627915-1628093:1:exon
so has part: feature:1628996-1629092:1:exon
so has part: feature:1630720-1630746:1:exon
so has part: feature:1631494-1631697:1:exon
so has part: feature:1635894-1636071:1:exon
so has part: feature:1639458-1639532:1:exon
so has part: feature:1640126-1640253:1:exon
so has part: feature:1640502-1640633:1:exon
so has part: feature:1640758-1640906:1:exon
so has part: feature:1645395-1645520:1:exon
so has part: feature:1647847-1649903:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1626555-1626667:1:exon

position:1626667:1
position: 1626667
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1627001-1627119:1:exon

position:1627001:1
position: 1627001
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1627119:1
position: 1627119
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1627301-1627454:1:exon

position:1627301:1
position: 1627301
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1627454:1
position: 1627454
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1627915-1628093:1:exon

position:1627915:1
position: 1627915
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1628093:1
position: 1628093
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1628996-1629092:1:exon

position:1628996:1
position: 1628996
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1629092:1
position: 1629092
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1630720-1630746:1:exon

position:1630720:1
position: 1630720
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1630746:1
position: 1630746
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1631494-1631697:1:exon

position:1631494:1
position: 1631494
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1631697:1
position: 1631697
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1635894-1636071:1:exon

position:1635894:1
position: 1635894
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1636071:1
position: 1636071
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:1639458-1639532:1:exon

position:1639458:1
position: 1639458
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1639532:1
position: 1639532
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:1640126-1640253:1:exon

position:1640126:1
position: 1640126
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1640253:1
position: 1640253
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:1640502-1640633:1:exon

position:1640502:1
position: 1640502
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1640633:1
position: 1640633
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:1640758-1640906:1:exon

position:1640758:1
position: 1640758
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1640906:1
position: 1640906
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:1645395-1645520:1:exon

position:1645395:1
position: 1645395
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1645520:1
position: 1645520
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:1647847-1649903:1:exon

position:1647847:1
position: 1647847
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC115907402
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 87175
gene: LOC115907402
product: mucosa-associated lymphoid tissue lymphoma translocation protein 1 homolog, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_030955291.1
SIO_010081: LOC115907402
subclass of: SO_0000673
so part of: LOC115907402
location: join(1626555..1626667,1627001..1627119,1627301..1627454,1627915..1628093,1628996..1629092,1630720..1630746,1631494..1631697,1635894..1636071,1639458..1639532,1640126..1640253,1640502..1640633,1640758..1640906,1641893..1642028)
location: region:1626555-1642028:1
so has part: feature:1626555-1626667:1:exon
so has part: feature:1627001-1627119:1:exon
so has part: feature:1627301-1627454:1:exon
so has part: feature:1627915-1628093:1:exon
so has part: feature:1628996-1629092:1:exon
so has part: feature:1630720-1630746:1:exon
so has part: feature:1631494-1631697:1:exon
so has part: feature:1635894-1636071:1:exon
so has part: feature:1639458-1639532:1:exon
so has part: feature:1640126-1640253:1:exon
so has part: feature:1640502-1640633:1:exon
so has part: feature:1640758-1640906:1:exon
so has part: feature:1641893-1642028:1:exon

position:1642028:1
position: 1642028
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1626555-1626667:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1627001-1627119:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1627301-1627454:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1627915-1628093:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1628996-1629092:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1630720-1630746:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1631494-1631697:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1635894-1636071:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1639458-1639532:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1640126-1640253:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1640502-1640633:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1640758-1640906:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1641893-1642028:1:exon

position:1641893:1
position: 1641893
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC115907402
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 87175
gene: LOC115907402
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: mucosa-associated lymphoid tissue lymphoma translocation protein 1 homolog isoform X1
translation: MQEAITITEQPVSVSVPVGYSFTLRCRARGRSSLQYQWFCQYQSDCRLIPGATNQDLPIIAEQTQLYTCRVNDLHRNAVFSDWVKVEVHQCVARGLPPRLWQGEPVIVLNPQEQRVEVGQPLQLQCAAMGVPAPSYQWYRNGNLLEQQKRKKLQITHTRVSDSGTYLCCASNSHGEHWSNAVDVHIGPCGSGKFFATGKIALLVGNNRYQHHPNLMAPVRDVFELRHLLEHLGFQVVSLLDLNKAEMATAVSEFLQLLGKGVYAIFYYAGHGYEHLGRNYMVPVDAPQPYAPENCISVQRILQKMQQQQTALNIILLDTCRKWYNPGRALSQVQPLEPWGNTVYGYSTSEDAEAYELQDGEFSSGIFMKYLKKHILQEKKVTHMLEDVLEDIGRDPLVTGKQVMEIKHTLKEARSLTDPICPSGVGAERWGHGQELPSRTVTFPCGARVQLRFLRLFSNLMFVCAKPLPPLAHITEPQLLLHQLETEDVAIQRESCLDHVETLLASVYKREELDCIFQLCALQKIQTDVVLQLDLHYTEPSTNQRTCESLQSTLQKSLLRQFVGQRKDSQPAPARVCPQDALGLGTEPKGSLGTGSGHSFPSSSPSTFSSEPEENDENELALPGPGQDRP
SIO_010081: LOC115907402
subclass of: SO_0000673
so part of: LOC115907402
location: join(1626658..1626667,1627001..1627119,1627301..1627454,1627915..1628093,1628996..1629092,1630720..1630746,1631494..1631697,1635894..1636071,1639458..1639532,1640126..1640253,1640502..1640633,1640758..1640906,1645395..1645520,1647847..1648161)
location: region:1626658-1648161:1
so has part: feature:1626658-1626667:1:exon
so has part: feature:1627001-1627119:1:exon
so has part: feature:1627301-1627454:1:exon
so has part: feature:1627915-1628093:1:exon
so has part: feature:1628996-1629092:1:exon
so has part: feature:1630720-1630746:1:exon
so has part: feature:1631494-1631697:1:exon
so has part: feature:1635894-1636071:1:exon
so has part: feature:1639458-1639532:1:exon
so has part: feature:1640126-1640253:1:exon
so has part: feature:1640502-1640633:1:exon
so has part: feature:1640758-1640906:1:exon
so has part: feature:1645395-1645520:1:exon
so has part: feature:1647847-1648161:1:exon

XP_030811150.1
type: Protein
SIO_000068: ncbiprotein

position:1626658:1
position: 1626658
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1648161:1
position: 1648161
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1626658-1626667:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1627001-1627119:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1627301-1627454:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1627915-1628093:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1628996-1629092:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1630720-1630746:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1631494-1631697:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1635894-1636071:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1639458-1639532:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1640126-1640253:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1640502-1640633:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1640758-1640906:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1645395-1645520:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1647847-1648161:1:exon

LOC115907402
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 87175
gene: LOC115907402
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: mucosa-associated lymphoid tissue lymphoma translocation protein 1 homolog isoform X2
translation: MQEAITITEQPVSVSVPVGYSFTLRCRARGRSSLQYQWFCQYQSDCRLIPGATNQDLPIIAEQTQLYTCRVNDLHRNAVFSDWVKVEVHQCVARGLPPRLWQGEPVIVLNPQEQRVEVGQPLQLQCAAMGVPAPSYQWYRNGNLLEQQKRKKLQITHTRVSDSGTYLCCASNSHGEHWSNAVDVHIGPCGSGKFFATGKIALLVGNNRYQHHPNLMAPVRDVFELRHLLEHLGFQVVSLLDLNKAEMATAVSEFLQLLGKGVYAIFYYAGHGYEHLGRNYMVPVDAPQPYAPENCISVQRILQKMQQQQTALNIILLDTCRKWYNPGRALSQVQPLEPWGNTVYGYSTSEDAEAYELQDGEFSSGIFMKYLKKHILQEKKVTHMLEDVLEDIGRDPLVTGKQVMEIKHTLKEARSLTDPICPSGVGAERWGHGQELPSRTVTFPCGARVQLRFLRLFSNLMFVCAKPLPPLAHITEPQLLLHQLLICGGFLALVSRGGTLLLSTVGSLMQRGVSRRFGA
SIO_010081: LOC115907402
subclass of: SO_0000673
so part of: LOC115907402
location: join(1626658..1626667,1627001..1627119,1627301..1627454,1627915..1628093,1628996..1629092,1630720..1630746,1631494..1631697,1635894..1636071,1639458..1639532,1640126..1640253,1640502..1640633,1640758..1640906,1641893..1642000)
location: region:1626658-1642000:1
so has part: feature:1626658-1626667:1:exon
so has part: feature:1627001-1627119:1:exon
so has part: feature:1627301-1627454:1:exon
so has part: feature:1627915-1628093:1:exon
so has part: feature:1628996-1629092:1:exon
so has part: feature:1630720-1630746:1:exon
so has part: feature:1631494-1631697:1:exon
so has part: feature:1635894-1636071:1:exon
so has part: feature:1639458-1639532:1:exon
so has part: feature:1640126-1640253:1:exon
so has part: feature:1640502-1640633:1:exon
so has part: feature:1640758-1640906:1:exon
so has part: feature:1641893-1642000:1:exon

XP_030811151.1
type: Protein
SIO_000068: ncbiprotein

position:1642000:1
position: 1642000
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1626658-1626667:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1627001-1627119:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1627301-1627454:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1627915-1628093:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1628996-1629092:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1630720-1630746:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1631494-1631697:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1635894-1636071:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1639458-1639532:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1640126-1640253:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1640502-1640633:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1640758-1640906:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1641893-1642000:1:exon

ZNF592
type: Gene
subclass of: SO_0000704
RO_0002162: 87175
gene: ZNF592
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1665256..1702375
location: region:1665256-1702375:1
so has part: feature:1665256-1702375:1:exon
subclass of: SO_0000010

115907454
type: Gene
SIO_000068: ncbigene

position:1665256:1
position: 1665256
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1702375:1
position: 1702375
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1665256-1702375:1:exon

ZNF592
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 87175
gene: ZNF592
product: zinc finger protein 592
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 2 ESTs, 11 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
transcript id: XM_030955386.1
SIO_010081: ZNF592
subclass of: SO_0000673
so part of: ZNF592
location: join(1665256..1665361,1669032..1671334,1684581..1684759,1690259..1690435,1691206..1691365,1693955..1694233,1695272..1695384,1699356..1699491,1700694..1702375)
location: region:1665256-1702375:1
so has part: feature:1665256-1665361:1:exon
so has part: feature:1669032-1671334:1:exon
so has part: feature:1684581-1684759:1:exon
so has part: feature:1690259-1690435:1:exon
so has part: feature:1691206-1691365:1:exon
so has part: feature:1693955-1694233:1:exon
so has part: feature:1695272-1695384:1:exon
so has part: feature:1699356-1699491:1:exon
so has part: feature:1700694-1702375:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1665256-1665361:1:exon

position:1665361:1
position: 1665361
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1669032-1671334:1:exon

position:1669032:1
position: 1669032
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1671334:1
position: 1671334
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1684581-1684759:1:exon

position:1684581:1
position: 1684581
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1684759:1
position: 1684759
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1690259-1690435:1:exon

position:1690259:1
position: 1690259
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1690435:1
position: 1690435
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1691206-1691365:1:exon

position:1691206:1
position: 1691206
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1691365:1
position: 1691365
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1693955-1694233:1:exon

position:1693955:1
position: 1693955
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1694233:1
position: 1694233
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1695272-1695384:1:exon

position:1695272:1
position: 1695272
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1695384:1
position: 1695384
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1699356-1699491:1:exon

position:1699356:1
position: 1699356
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1699491:1
position: 1699491
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:1700694-1702375:1:exon

position:1700694:1
position: 1700694
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

ZNF592
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 87175
gene: ZNF592
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: zinc finger protein 592
translation: MGDMKTPDFDDLLAAFDIPDPTSLDAKETIPSAGEENENHLKSSGMCIDENVSLSHSLPPSDAPVVSVIVKNTSRQESFEAEKEGNHLGTGLLHNGFRGSDLPAEAHALVHNYGKFESTFINGDSSRGYSDKLDESKSEPLPTFSQFSPISSPEPEDTFKENSIGDKPKHAQTPYFPPPSIYVPTGASVLDHLRKVPEPELSMFDQYCKKEQKTEIHCQPENRLEMSRREQDRAVERFAESGKDLLDTNSFLGEGLVFGDLPHNNLGDGKGSVPELNMSSSIPPRQRLKPTHSKLSSCVAALVALQAKKVVCIPKSDQPNFTKEPGPFKDGTKGSPKMPKSPKSPRSPLEVVRKAGKQPESPRSVCSDSSGKGSPSMAAGSPPAIPKVRIKTIKTSSGEIKRTVTRILPENDELGKSSEESPAETSSAEEFIKSFPSPDTSAVTEGEAGRNSSKNGAAVAIQLSNVVSPYSDSVKMDIANSTCTVSLSPLPNCGGGAIKVGVKRQQPSNTATSSLLPKAVHLANLNLVPHSVAASVTAKTSAQRRSQPQVTQMSVPLVHQVKKAAPVVMEAFHKVLHSANPVPIYTPNLSPPPDTSINLPASGYCCLECGDSFALEKSLTQHYSRRSVHIEVMCTQCSTMLLFFNKCSLLKHARDHKSKGFIMQCSQLLMKPISIDQMFSPSPTSSSASPAPQTFLSSSPPPKSSAASGGGVGISASTQPALPLYTDPQRLIRHGSKCLECNKQEQDYTSLAAHYQRTSEDNERLTCQVCQMMLPNQCSYCAHQRIHAHKSPYCCPECGAVCRSAYFQTHVKENCLHYSRKVGFRCIHCGVVFMTLAMLKVHIHEKHCEVFHKCSFCPKAFKSADTTMAHVASQHPAEPHKTTQVIYKCSCEMVFNKKKLLQEHFQQNPSKLLVGVFKCPQCQLVYMQKQQLMQHVKGVHGVPRNPEELSNFRQKSEKASRNQVHTSPKELLVANGTSPSPLTRKEMRVEGHNPESKSRLRRTGWTCKECSQWIPDRETYVSHMKRNHGRSMKRYPCRQCERSFNASNSLRRHIRNNHDTAKKVYTCWYCTDENQTFPQPFMLENHISLMHGIKNPDLSQMAKVKAPERDRAEAKSPKRMAQDELGEAESAAGSDTPPAKKLRAPWKCAKCGFATDVQTEFQEHIPRHKSDSSTFQCLFCGLCYTSHISLNRHLFIVHKVKDEEEEDEEEEEEEGDERQKLQIEMGKNGHEDYNGELNTTVEEENKYRECKRDSALCEHSQTCGAEGPNSTSQNNHSKSLKT
SIO_010081: ZNF592
subclass of: SO_0000673
so part of: ZNF592
location: join(1669040..1671334,1684581..1684759,1690259..1690435,1691206..1691365,1693955..1694233,1695272..1695384,1699356..1699491,1700694..1701203)
location: region:1669040-1701203:1
so has part: feature:1669040-1671334:1:exon
so has part: feature:1684581-1684759:1:exon
so has part: feature:1690259-1690435:1:exon
so has part: feature:1691206-1691365:1:exon
so has part: feature:1693955-1694233:1:exon
so has part: feature:1695272-1695384:1:exon
so has part: feature:1699356-1699491:1:exon
so has part: feature:1700694-1701203:1:exon

XP_030811246.1
type: Protein
SIO_000068: ncbiprotein

position:1669040:1
position: 1669040
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1701203:1
position: 1701203
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1669040-1671334:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1684581-1684759:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1690259-1690435:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1691206-1691365:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1693955-1694233:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1695272-1695384:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1699356-1699491:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1700694-1701203:1:exon

SEC11A
type: Gene
subclass of: SO_0000704
RO_0002162: 87175
gene: SEC11A
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1703376..1710758
location: region:1703376-1710758:1
so has part: feature:1703376-1710758:1:exon
subclass of: SO_0000010

115907263
type: Gene
SIO_000068: ncbigene

position:1703376:1
position: 1703376
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1710758:1
position: 1710758
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1703376-1710758:1:exon

SEC11A
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 87175
gene: SEC11A
product: SEC11 homolog A, signal peptidase complex subunit, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 mRNAs, 67 ESTs, 38 Proteins, and 97% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XM_030955021.1
SIO_010081: SEC11A
subclass of: SO_0000673
so part of: SEC11A
location: join(1703376..1703505,1703609..1703718,1705900..1706049,1709537..1709656,1710084..1710141,1710286..1710758)
location: region:1703376-1710758:1
so has part: feature:1703376-1703505:1:exon
so has part: feature:1703609-1703718:1:exon
so has part: feature:1705900-1706049:1:exon
so has part: feature:1709537-1709656:1:exon
so has part: feature:1710084-1710141:1:exon
so has part: feature:1710286-1710758:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1703376-1703505:1:exon

position:1703505:1
position: 1703505
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1703609-1703718:1:exon

position:1703609:1
position: 1703609
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1703718:1
position: 1703718
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1705900-1706049:1:exon

position:1705900:1
position: 1705900
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1706049:1
position: 1706049
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1709537-1709656:1:exon

position:1709537:1
position: 1709537
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1709656:1
position: 1709656
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1710084-1710141:1:exon

position:1710084:1
position: 1710084
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1710141:1
position: 1710141
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1710286-1710758:1:exon

position:1710286:1
position: 1710286
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

SEC11A
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 87175
gene: SEC11A
product: SEC11 homolog A, signal peptidase complex subunit, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 ESTs, 4 Proteins, and 85% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
transcript id: XM_030955020.1
SIO_010081: SEC11A
subclass of: SO_0000673
so part of: SEC11A
location: join(1703408..1703505,1703609..1703718,1705900..1706049,1709537..1709656,1710084..1710573)
location: region:1703408-1710573:1
so has part: feature:1703408-1703505:1:exon
so has part: feature:1703609-1703718:1:exon
so has part: feature:1705900-1706049:1:exon
so has part: feature:1709537-1709656:1:exon
so has part: feature:1710084-1710573:1:exon

position:1703408:1
position: 1703408
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1710573:1
position: 1710573
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1703408-1703505:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1703609-1703718:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1705900-1706049:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1709537-1709656:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1710084-1710573:1:exon

SEC11A
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 87175
gene: SEC11A
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: signal peptidase complex catalytic subunit SEC11A isoform X1
translation: MLSLDFLDDVRRMNKRQLYYQVLNFGMIVSSALMIWKGLMVVTGSESPIVVVLSGSMEPAFHRGDLLFLTNRIEDPIRVGEIVVFRIEGREIPIVHRVLKIHEKQNGDIKFLTKGDNNAVDDRGLYKQGQHWLEKKDVVGRARGFVPYIGIVTILMNDYPKFKVRAPLFPACFSHPSYNPFLRAQAEPRALHVCCCRCQCALLCLLCSLFQYAVLFLLGLFVLVHRE
SIO_010081: SEC11A
subclass of: SO_0000673
so part of: SEC11A
location: join(1703455..1703505,1703609..1703718,1705900..1706049,1709537..1709656,1710084..1710336)
location: region:1703455-1710336:1
so has part: feature:1703455-1703505:1:exon
so has part: feature:1703609-1703718:1:exon
so has part: feature:1705900-1706049:1:exon
so has part: feature:1709537-1709656:1:exon
so has part: feature:1710084-1710336:1:exon

XP_030810880.1
type: Protein
SIO_000068: ncbiprotein

position:1703455:1
position: 1703455
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1710336:1
position: 1710336
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1703455-1703505:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1703609-1703718:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1705900-1706049:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1709537-1709656:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1710084-1710336:1:exon

SEC11A
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 87175
gene: SEC11A
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: signal peptidase complex catalytic subunit SEC11A isoform X2
translation: MLSLDFLDDVRRMNKRQLYYQVLNFGMIVSSALMIWKGLMVVTGSESPIVVVLSGSMEPAFHRGDLLFLTNRIEDPIRVGEIVVFRIEGREIPIVHRVLKIHEKQNGDIKFLTKGDNNAVDDRGLYKQGQHWLEKKDVVGRARGFVPYIGIVTILMNDYPKFKYAVLFLLGLFVLVHRE
SIO_010081: SEC11A
subclass of: SO_0000673
so part of: SEC11A
location: join(1703455..1703505,1703609..1703718,1705900..1706049,1709537..1709656,1710084..1710141,1710286..1710336)
location: region:1703455-1710336:1
so has part: feature:1703455-1703505:1:exon
so has part: feature:1703609-1703718:1:exon
so has part: feature:1705900-1706049:1:exon
so has part: feature:1709537-1709656:1:exon
so has part: feature:1710084-1710141:1:exon
so has part: feature:1710286-1710336:1:exon

XP_030810881.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1703455-1703505:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1703609-1703718:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1705900-1706049:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1709537-1709656:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1710084-1710141:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1710286-1710336:1:exon

NMB
type: Gene
subclass of: SO_0000704
RO_0002162: 87175
gene: NMB
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1722558..1727305
location: region:1722558-1727305:1
so has part: feature:1722558-1727305:1:exon
subclass of: SO_0000010

115907507
type: Gene
SIO_000068: ncbigene

position:1722558:1
position: 1722558
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1727305:1
position: 1727305
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1722558-1727305:1:exon

NMB
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 87175
gene: NMB
product: neuromedin B
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 mRNAs, 9 ESTs, 2 Proteins, and 70% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_030955452.1
SIO_010081: NMB
subclass of: SO_0000673
so part of: NMB
location: join(1722558..1722780,1723463..1723665,1727036..1727305)
location: region:1722558-1727305:1
so has part: feature:1722558-1722780:1:exon
so has part: feature:1723463-1723665:1:exon
so has part: feature:1727036-1727305:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1722558-1722780:1:exon

position:1722780:1
position: 1722780
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1723463-1723665:1:exon

position:1723463:1
position: 1723463
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1723665:1
position: 1723665
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1727036-1727305:1:exon

position:1727036:1
position: 1727036
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

NMB
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 87175
gene: NMB
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: neuromedin-B
translation: MALRCLLLLLCGAALGPAVHLDFAEHRSQAAKIKVNPRGNLWATGHFMGKKSVTGSPHLEAAEEPAVPMVFGPSLRALLEDMMELLTRELLKILLQERLLDENQGKYDLTGQETGLLTKVLEKYFSN
SIO_010081: NMB
subclass of: SO_0000673
so part of: NMB
location: join(1722648..1722780,1723463..1723665,1727036..1727083)
location: region:1722648-1727083:1
so has part: feature:1722648-1722780:1:exon
so has part: feature:1723463-1723665:1:exon
so has part: feature:1727036-1727083:1:exon

XP_030811312.1
type: Protein
SIO_000068: ncbiprotein

position:1722648:1
position: 1722648
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1727083:1
position: 1727083
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1722648-1722780:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1723463-1723665:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1727036-1727083:1:exon

LOC115907493
type: Gene
subclass of: SO_0000704
RO_0002162: 87175
gene: LOC115907493
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1730306..1747600
location: region:1730306-1747600:1
so has part: feature:1730306-1747600:1:exon
subclass of: SO_0000010

115907493
type: Gene
SIO_000068: ncbigene

position:1730306:1
position: 1730306
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1747600:1
position: 1747600
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1730306-1747600:1:exon

LOC115907493
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 87175
gene: LOC115907493
product: dual oxidase maturation factor 1-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 21 Proteins, and 58% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_030955435.1
SIO_010081: LOC115907493
subclass of: SO_0000673
so part of: LOC115907493
location: join(1730306..1730472,1740404..1740528,1741157..1741311,1742164..1742221,1742840..1742974,1743142..1743355,1746566..1746780,1747349..1747600)
location: region:1730306-1747600:1
so has part: feature:1730306-1730472:1:exon
so has part: feature:1740404-1740528:1:exon
so has part: feature:1741157-1741311:1:exon
so has part: feature:1742164-1742221:1:exon
so has part: feature:1742840-1742974:1:exon
so has part: feature:1743142-1743355:1:exon
so has part: feature:1746566-1746780:1:exon
so has part: feature:1747349-1747600:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1730306-1730472:1:exon

position:1730472:1
position: 1730472
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1740404-1740528:1:exon

position:1740404:1
position: 1740404
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1740528:1
position: 1740528
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1741157-1741311:1:exon

position:1741157:1
position: 1741157
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1741311:1
position: 1741311
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1742164-1742221:1:exon

position:1742164:1
position: 1742164
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1742221:1
position: 1742221
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1742840-1742974:1:exon

position:1742840:1
position: 1742840
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1742974:1
position: 1742974
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1743142-1743355:1:exon

position:1743142:1
position: 1743142
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1743355:1
position: 1743355
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1746566-1746780:1:exon

position:1746566:1
position: 1746566
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1746780:1
position: 1746780
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1747349-1747600:1:exon

position:1747349:1
position: 1747349
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC115907493
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 87175
gene: LOC115907493
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: dual oxidase maturation factor 1-like
translation: MASICVWGPVAQNGRCLLEFRLSQDASQTQAATTGNSGWFDSAKCLLQTDTRNLNWRCKRAGRRRHGSSRNIPEHLRSSRSIPAHPGASRRSQPGTGGSKMTLWDGSYPFYPGANACFPFDTTRAVIVTVFLSVLATFIIILPGIPGRRRLLWFLRLLLGLFVGAVILNVQFTGDWQSGWVQANTSYKSFSPAQVSADIGLHIGLAGLNVTLRGKPVEQINETINYNEHFPWSFGADYDHSYSQGLQKGLPSPILYVAEKFSSQSPCGLHGQYRIAGHYVSLTLWLAFCTWLISILLFSMSILLYGGQMLLLTGTLILSSLLLFSTARNSLKCPVQFGPVSLRTDYGESFWLALATGLLCLLLGLAIIILNSVQPQKLKLIFSLDKSNEEEPWDQSWLPAQPSCSAQGGFMVPLGELCPGTATQL
SIO_010081: LOC115907493
subclass of: SO_0000673
so part of: LOC115907493
location: join(1730306..1730472,1740404..1740528,1741157..1741311,1742164..1742221,1742840..1742974,1743142..1743355,1746566..1746780,1747349..1747557)
location: region:1730306-1747557:1
so has part: feature:1730306-1730472:1:exon
so has part: feature:1740404-1740528:1:exon
so has part: feature:1741157-1741311:1:exon
so has part: feature:1742164-1742221:1:exon
so has part: feature:1742840-1742974:1:exon
so has part: feature:1743142-1743355:1:exon
so has part: feature:1746566-1746780:1:exon
so has part: feature:1747349-1747557:1:exon

XP_030811295.1
type: Protein
SIO_000068: ncbiprotein

position:1747557:1
position: 1747557
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1730306-1730472:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1740404-1740528:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1741157-1741311:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1742164-1742221:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1742840-1742974:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1743142-1743355:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1746566-1746780:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1747349-1747557:1:exon

DUOXA2
type: Gene
subclass of: SO_0000704
RO_0002162: 87175
gene: DUOXA2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1750183..1755465)
location: region:1750183-1755465:-1
so has part: feature:1750183-1755465:-1:exon
subclass of: SO_0000010

115907499
type: Gene
SIO_000068: ncbigene

position:1750183:-1
position: 1750183
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1755465:-1
position: 1755465
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1750183-1755465:-1:exon

DUOXA2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 87175
gene: DUOXA2
product: dual oxidase maturation factor 2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 22 Proteins, and 83% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_030955443.1
SIO_010081: DUOXA2
subclass of: SO_0000673
so part of: DUOXA2
location: complement(join(1750183..1750376,1750710..1750924,1751963..1752176,1752344..1752478,1754706..1754763,1755319..1755465))
location: region:1750183-1755465:-1
so has part: feature:1755319-1755465:-1:exon
so has part: feature:1754706-1754763:-1:exon
so has part: feature:1752344-1752478:-1:exon
so has part: feature:1751963-1752176:-1:exon
so has part: feature:1750710-1750924:-1:exon
so has part: feature:1750183-1750376:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1755319-1755465:-1:exon

position:1755319:-1
position: 1755319
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1754706-1754763:-1:exon

position:1754706:-1
position: 1754706
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1754763:-1
position: 1754763
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1752344-1752478:-1:exon

position:1752344:-1
position: 1752344
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1752478:-1
position: 1752478
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1751963-1752176:-1:exon

position:1751963:-1
position: 1751963
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1752176:-1
position: 1752176
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1750710-1750924:-1:exon

position:1750710:-1
position: 1750710
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1750924:-1
position: 1750924
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1750183-1750376:-1:exon

position:1750376:-1
position: 1750376
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

DUOXA2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 87175
gene: DUOXA2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: dual oxidase maturation factor 2
translation: MTLFDGVYPFYPQQRKAAVFDISTITVTVVFLTLACSFLLITPGIRGRVRLYWTLRVLFSLFVGVVIVVVQFTRDWQSGWVQANTSYKSFSPAQVSADIGLHIGLAGLNVTLRGKPVEQINETINYNEHFPWSFGADYDHSYSQGLQKGLPSPILYVAEKFSSQSPCGLHGQYRIAGHYASAMLWVAFCTWVMSNILLSMPALVYGGYMLLATGAFMIFSLLSFSTVRSSPVCLIQIGTSTLHVAYGASFWLMLAVGLLCVVAGITVVAMHHLNLDLLKTFFDLREDKAEEHQEMLQVFINPHFVSKSLSPSEPSEINSV
SIO_010081: DUOXA2
subclass of: SO_0000673
so part of: DUOXA2
location: complement(join(1750183..1750376,1750710..1750924,1751963..1752176,1752344..1752478,1754706..1754763,1755319..1755465))
location: region:1750183-1755465:-1
so has part: feature:1755319-1755465:-1:exon
so has part: feature:1754706-1754763:-1:exon
so has part: feature:1752344-1752478:-1:exon
so has part: feature:1751963-1752176:-1:exon
so has part: feature:1750710-1750924:-1:exon
so has part: feature:1750183-1750376:-1:exon

XP_030811303.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1755319-1755465:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1754706-1754763:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1752344-1752478:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1751963-1752176:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1750710-1750924:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1750183-1750376:-1:exon

DUOX2
type: Gene
subclass of: SO_0000704
RO_0002162: 87175
gene: DUOX2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1762773..1784778
location: region:1762773-1784778:1
so has part: feature:1762773-1784778:1:exon
subclass of: SO_0000010

115907387
type: Gene
SIO_000068: ncbigene

position:1762773:1
position: 1762773
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1784778:1
position: 1784778
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1762773-1784778:1:exon

DUOX2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 87175
gene: DUOX2
product: dual oxidase 2
exception: unclassified transcription discrepancy
note: The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: inserted 1 base in 1 codon; deleted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 20 Proteins, and 35% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_030955256.1
SIO_010081: DUOX2
subclass of: SO_0000673
so part of: DUOX2
location: join(1762773..1762990,1763699..1763782,1766501..1766665,1767887..1768074,1769114..1769315,1769957..1770123,1770208..1770268,1770388..1770484,1772013..1772100,1772431..1772533,1772680..1772843,1773270..1773436,1773590..1773708,1774460..1774597,1775207..1775320,1775891..1776093,1776287..1776472,1776893..1777118,1777716..1777809,1777996..1778171,1778793..1778862,1779305..1779400,1780151..1780329,1781168..1781398,1781616..1781715,1781834..1781883,1782136..1782263,1782472..1782625,1782749..1782974,1783485..1783643,1783831..1783986,1784096..1784224,1784656..1784778)
location: region:1762773-1784778:1
so has part: feature:1762773-1762990:1:exon
so has part: feature:1763699-1763782:1:exon
so has part: feature:1766501-1766665:1:exon
so has part: feature:1767887-1768074:1:exon
so has part: feature:1769114-1769315:1:exon
so has part: feature:1769957-1770123:1:exon
so has part: feature:1770208-1770268:1:exon
so has part: feature:1770388-1770484:1:exon
so has part: feature:1772013-1772100:1:exon
so has part: feature:1772431-1772533:1:exon
so has part: feature:1772680-1772843:1:exon
so has part: feature:1773270-1773436:1:exon
so has part: feature:1773590-1773708:1:exon
so has part: feature:1774460-1774597:1:exon
so has part: feature:1775207-1775320:1:exon
so has part: feature:1775891-1776093:1:exon
so has part: feature:1776287-1776472:1:exon
so has part: feature:1776893-1777118:1:exon
so has part: feature:1777716-1777809:1:exon
so has part: feature:1777996-1778171:1:exon
so has part: feature:1778793-1778862:1:exon
so has part: feature:1779305-1779400:1:exon
so has part: feature:1780151-1780329:1:exon
so has part: feature:1781168-1781398:1:exon
so has part: feature:1781616-1781715:1:exon
so has part: feature:1781834-1781883:1:exon
so has part: feature:1782136-1782263:1:exon
so has part: feature:1782472-1782625:1:exon
so has part: feature:1782749-1782974:1:exon
so has part: feature:1783485-1783643:1:exon
so has part: feature:1783831-1783986:1:exon
so has part: feature:1784096-1784224:1:exon
so has part: feature:1784656-1784778:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1762773-1762990:1:exon

position:1762990:1
position: 1762990
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1763699-1763782:1:exon

position:1763699:1
position: 1763699
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1763782:1
position: 1763782
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1766501-1766665:1:exon

position:1766501:1
position: 1766501
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1766665:1
position: 1766665
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1767887-1768074:1:exon

position:1767887:1
position: 1767887
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1768074:1
position: 1768074
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1769114-1769315:1:exon

position:1769114:1
position: 1769114
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1769315:1
position: 1769315
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1769957-1770123:1:exon

position:1769957:1
position: 1769957
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1770123:1
position: 1770123
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1770208-1770268:1:exon

position:1770208:1
position: 1770208
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1770268:1
position: 1770268
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1770388-1770484:1:exon

position:1770388:1
position: 1770388
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1770484:1
position: 1770484
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:1772013-1772100:1:exon

position:1772013:1
position: 1772013
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1772100:1
position: 1772100
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:1772431-1772533:1:exon

position:1772431:1
position: 1772431
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1772533:1
position: 1772533
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:1772680-1772843:1:exon

position:1772680:1
position: 1772680
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1772843:1
position: 1772843
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:1773270-1773436:1:exon

position:1773270:1
position: 1773270
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1773436:1
position: 1773436
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:1773590-1773708:1:exon

position:1773590:1
position: 1773590
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1773708:1
position: 1773708
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:1774460-1774597:1:exon

position:1774460:1
position: 1774460
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1774597:1
position: 1774597
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:1775207-1775320:1:exon

position:1775207:1
position: 1775207
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1775320:1
position: 1775320
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:1775891-1776093:1:exon

position:1775891:1
position: 1775891
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1776093:1
position: 1776093
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:1776287-1776472:1:exon

position:1776287:1
position: 1776287
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1776472:1
position: 1776472
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:1776893-1777118:1:exon

position:1776893:1
position: 1776893
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1777118:1
position: 1777118
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:1777716-1777809:1:exon

position:1777716:1
position: 1777716
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1777809:1
position: 1777809
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:1777996-1778171:1:exon

position:1777996:1
position: 1777996
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1778171:1
position: 1778171
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:1778793-1778862:1:exon

position:1778793:1
position: 1778793
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1778862:1
position: 1778862
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 22
SIO_000628: feature:1779305-1779400:1:exon

position:1779305:1
position: 1779305
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1779400:1
position: 1779400
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 23
SIO_000628: feature:1780151-1780329:1:exon

position:1780151:1
position: 1780151
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1780329:1
position: 1780329
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 24
SIO_000628: feature:1781168-1781398:1:exon

position:1781168:1
position: 1781168
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1781398:1
position: 1781398
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 25
SIO_000628: feature:1781616-1781715:1:exon

position:1781616:1
position: 1781616
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1781715:1
position: 1781715
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 26
SIO_000628: feature:1781834-1781883:1:exon

position:1781834:1
position: 1781834
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1781883:1
position: 1781883
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 27
SIO_000628: feature:1782136-1782263:1:exon

position:1782136:1
position: 1782136
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1782263:1
position: 1782263
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 28
SIO_000628: feature:1782472-1782625:1:exon

position:1782472:1
position: 1782472
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1782625:1
position: 1782625
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 29
SIO_000628: feature:1782749-1782974:1:exon

position:1782749:1
position: 1782749
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1782974:1
position: 1782974
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 30
SIO_000628: feature:1783485-1783643:1:exon

position:1783485:1
position: 1783485
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1783643:1
position: 1783643
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 31
SIO_000628: feature:1783831-1783986:1:exon

position:1783831:1
position: 1783831
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1783986:1
position: 1783986
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 32
SIO_000628: feature:1784096-1784224:1:exon

position:1784096:1
position: 1784096
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1784224:1
position: 1784224
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 33
SIO_000628: feature:1784656-1784778:1:exon

position:1784656:1
position: 1784656
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

DUOX2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 87175
gene: DUOX2
exception: unclassified translation discrepancy
note: The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: inserted 1 base in 1 codon; deleted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: LOW QUALITY PROTEIN: dual oxidase 2
translation: MAAGRFYPAAQTTARAEVCSFHDSSPWEEPTCSSFPLLSICRSLLPRIQWQMEPAAAMLSLVVALVGTCTLGSAQRSISWEVQRYDGWYNNLLHHSHGSVGARLLRLLPARFADGVYQALQEPRVPNARRLSTALARGPSGLPSRRNTTVLAVFFGFHVLLDILETEKPGCPAEFLNIHIPSGDAVFDPAGTGDVVLPFQRVRWAAETGQSPNSPREQTNGMTGWLDGSSIYGPSHSWSDALRSFQGGQLAAGPSGSLPRHTDGRVPMWKALDPATGQGGPQGIYDLGSAWGNESPFLQAESIAWFRYHNHVAAALAQLHPAWSDEDLFQHARKRVIATFQSIVLYEWLPTLLGTRVPEYPGYQQHLDPSLSPEFVAAARQFLATMVPPGVYKRDTRCRFQNVSASGASFPAVRLCNSYWSRESPGLQQAEAVDELLLGMSSQIAEREDNVVVEDLQDYWYGPLRYSRTDYVASWIQRGRDFGLPTYNQARQRFGLEPLQNWSSLAPHLEPQVLQKVAALYGNNLAGLELLPGGMLEADGSLFSTIILEQFLRLRDGDRFWFENTKNGLFTEEEIREIRNTTFHSVLASVTSARPTDLQPHVFIWRQGDPCPQPQQLTAQLLANCTPMVVLDYFAGSGAGFGIIIVALCCLPLVTLFVAWVVAALRRRDFQKLQRKQGTSVRREVSGEAVHAMEWHGPKTDSCPVYIQLQADKVLKVLDSRGSVLRSINLKAQPRVEVILSNNKGNKALLLKSPKEYDLVLLFNEEAERSIFVGKLRDYLKESRFDLHLSEMKEQSLMKRAVTQEQRKQILETFFRHLFAQVLEIDRSDAGELSFESSQKARESLTCELSRAEFAEALGLKEHSMFVESMFSLADKDGNGYISFREFLDILVVFMKGSPEEKSKVMFRMYDIDENGFLSKEEFLRMLRSFIEISNNCLSREQAEQVTESMFRASGFQDRDELTWENFHYMLRDHDSELRLTQLCVKGIPEVSKQNLHNCVSFIKKNEPKGTILEEKKDPNLDPVSHYMERKGQELRKRPGRKANQYQLRLYTEARRTKYERNRVQQKIQEFKRFVENYRRHIVCVILFSAITAGVFAERAYYYAFASPSTGIAQTTFVGIIISRGSAASISFMYSYILLTMCRNLITVLRETFLNHYIPFDAAVDFHRWIAMAALIFSVLHTAGHVVNVYIFSVTPLSVLSCLFSTVFTNDGSQLPQKYYWWFFQTIPGMTGVLLLVVLAVMYVFATRHFRRVSFQGFWITHHLYVLLYILVIIHGSYALIQQPRFYIYFIIPALIYSADKLYSLSRKKVEISVVKAELLPSGVTHLQFQRPQDFDYKSGQWVRIACVGLGTTEYHPFTLTSAPHXLSLHIRAVGPWTTRLRELYSPKSLALLGTLPKLYLDGPFGEGHQEWNKFEVSVLVGGGIGVTPFASILKDLVFKSSINSKLLCKKIYFIWVTRTQRQFEWLTDIIREVEESDKNGLVSVHIYITQLAEKFDLRTTMLYICERHFQKVLNKSLFTGLRSITHFGRPPFVPFFSSLQEVHPEVQKIGVFSCGPPGMTKSVEQACRHMNRKDQTYFAHHYENF
SIO_010081: DUOX2
subclass of: SO_0000673
so part of: DUOX2
location: join(1762773..1762990,1763699..1763782,1766501..1766665,1767887..1768074,1769114..1769315,1769957..1770123,1770208..1770268,1770388..1770484,1772013..1772100,1772431..1772533,1772680..1772843,1773270..1773436,1773590..1773708,1774460..1774597,1775207..1775320,1775891..1776093,1776287..1776472,1776893..1777118,1777716..1777809,1777996..1778171,1778793..1778862,1779305..1779400,1780151..1780329,1781168..1781398,1781616..1781715,1781834..1781883,1782136..1782263,1782472..1782625,1782749..1782974,1783485..1783643,1783831..1783986,1784096..1784224,1784656..1784778)
location: region:1762773-1784778:1
so has part: feature:1762773-1762990:1:exon
so has part: feature:1763699-1763782:1:exon
so has part: feature:1766501-1766665:1:exon
so has part: feature:1767887-1768074:1:exon
so has part: feature:1769114-1769315:1:exon
so has part: feature:1769957-1770123:1:exon
so has part: feature:1770208-1770268:1:exon
so has part: feature:1770388-1770484:1:exon
so has part: feature:1772013-1772100:1:exon
so has part: feature:1772431-1772533:1:exon
so has part: feature:1772680-1772843:1:exon
so has part: feature:1773270-1773436:1:exon
so has part: feature:1773590-1773708:1:exon
so has part: feature:1774460-1774597:1:exon
so has part: feature:1775207-1775320:1:exon
so has part: feature:1775891-1776093:1:exon
so has part: feature:1776287-1776472:1:exon
so has part: feature:1776893-1777118:1:exon
so has part: feature:1777716-1777809:1:exon
so has part: feature:1777996-1778171:1:exon
so has part: feature:1778793-1778862:1:exon
so has part: feature:1779305-1779400:1:exon
so has part: feature:1780151-1780329:1:exon
so has part: feature:1781168-1781398:1:exon
so has part: feature:1781616-1781715:1:exon
so has part: feature:1781834-1781883:1:exon
so has part: feature:1782136-1782263:1:exon
so has part: feature:1782472-1782625:1:exon
so has part: feature:1782749-1782974:1:exon
so has part: feature:1783485-1783643:1:exon
so has part: feature:1783831-1783986:1:exon
so has part: feature:1784096-1784224:1:exon
so has part: feature:1784656-1784778:1:exon

XP_030811116.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1762773-1762990:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1763699-1763782:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1766501-1766665:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1767887-1768074:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1769114-1769315:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1769957-1770123:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1770208-1770268:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1770388-1770484:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1772013-1772100:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1772431-1772533:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1772680-1772843:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1773270-1773436:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1773590-1773708:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1774460-1774597:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1775207-1775320:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1775891-1776093:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1776287-1776472:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:1776893-1777118:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:1777716-1777809:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:1777996-1778171:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:1778793-1778862:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:1779305-1779400:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:1780151-1780329:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:1781168-1781398:1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:1781616-1781715:1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:1781834-1781883:1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:1782136-1782263:1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:1782472-1782625:1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:1782749-1782974:1:exon

urn:…
SIO_000300: 30
SIO_000628: feature:1783485-1783643:1:exon

urn:…
SIO_000300: 31
SIO_000628: feature:1783831-1783986:1:exon

urn:…
SIO_000300: 32
SIO_000628: feature:1784096-1784224:1:exon

urn:…
SIO_000300: 33
SIO_000628: feature:1784656-1784778:1:exon

SORD
type: Gene
subclass of: SO_0000704
RO_0002162: 87175
gene: SORD
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1786264..1805629)
location: region:1786264-1805629:-1
so has part: feature:1786264-1805629:-1:exon
subclass of: SO_0000010

115907351
type: Gene
SIO_000068: ncbigene

position:1786264:-1
position: 1786264
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1805629:-1
position: 1805629
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1786264-1805629:-1:exon

SORD
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 87175
gene: SORD
product: sorbitol dehydrogenase
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 18 ESTs, 16 Proteins, and 98% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
transcript id: XM_030955192.1
SIO_010081: SORD
subclass of: SO_0000673
so part of: SORD
location: complement(join(1786264..1787295,1788803..1788924,1789727..1789902,1795159..1795224,1795424..1795542,1798227..1798386,1801151..1801315,1802027..1802060,1805469..1805629))
location: region:1786264-1805629:-1
so has part: feature:1805469-1805629:-1:exon
so has part: feature:1802027-1802060:-1:exon
so has part: feature:1801151-1801315:-1:exon
so has part: feature:1798227-1798386:-1:exon
so has part: feature:1795424-1795542:-1:exon
so has part: feature:1795159-1795224:-1:exon
so has part: feature:1789727-1789902:-1:exon
so has part: feature:1788803-1788924:-1:exon
so has part: feature:1786264-1787295:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1805469-1805629:-1:exon

position:1805469:-1
position: 1805469
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1802027-1802060:-1:exon

position:1802027:-1
position: 1802027
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1802060:-1
position: 1802060
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1801151-1801315:-1:exon

position:1801151:-1
position: 1801151
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1801315:-1
position: 1801315
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1798227-1798386:-1:exon

position:1798227:-1
position: 1798227
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1798386:-1
position: 1798386
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1795424-1795542:-1:exon

position:1795424:-1
position: 1795424
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1795542:-1
position: 1795542
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1795159-1795224:-1:exon

position:1795159:-1
position: 1795159
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1795224:-1
position: 1795224
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1789727-1789902:-1:exon

position:1789727:-1
position: 1789727
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1789902:-1
position: 1789902
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1788803-1788924:-1:exon

position:1788803:-1
position: 1788803
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1788924:-1
position: 1788924
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:1786264-1787295:-1:exon

position:1787295:-1
position: 1787295
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

SORD
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 87175
gene: SORD
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: sorbitol dehydrogenase
translation: MAVPGQNVAVVVHRAGDLRLENRPIPEPGPNEVLLRMHSVGICGSDVHYWQHGRIGDFVVKDPMVLGHEASGTVVKVGSGVTHLKPGDRVAIEPGVPREMDEFCKSGRYNLSPTIFFCATPPDDGNLCRYYKHSASYCYKLPDNVTFEEGALIEPLSVGIHACKRAGVTLGSKVFVSGSGPIGLVNVIVAKMMGAAAVVVTDLSASRLQKAKEVGADFTIQVKNETPQEVASKVESVLGCMPEITVECTGVQACIQAGIYATRSGGTLVLVGLGPEMVTVPMVNAAVREVDIRGIFRYCNTWPVAISLLASKRINVKPLVTHRFPLEKALEAFETTKRGEGVKVMLKCDPTDQNP
SIO_010081: SORD
subclass of: SO_0000673
so part of: SORD
location: complement(join(1787130..1787295,1788803..1788924,1789727..1789902,1795159..1795224,1795424..1795542,1798227..1798386,1801151..1801315,1802027..1802060,1805469..1805528))
location: region:1787130-1805528:-1
so has part: feature:1805469-1805528:-1:exon
so has part: feature:1802027-1802060:-1:exon
so has part: feature:1801151-1801315:-1:exon
so has part: feature:1798227-1798386:-1:exon
so has part: feature:1795424-1795542:-1:exon
so has part: feature:1795159-1795224:-1:exon
so has part: feature:1789727-1789902:-1:exon
so has part: feature:1788803-1788924:-1:exon
so has part: feature:1787130-1787295:-1:exon

XP_030811052.1
type: Protein
SIO_000068: ncbiprotein

position:1787130:-1
position: 1787130
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1805528:-1
position: 1805528
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1805469-1805528:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1802027-1802060:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1801151-1801315:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1798227-1798386:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1795424-1795542:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1795159-1795224:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1789727-1789902:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1788803-1788924:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1787130-1787295:-1:exon

RBPMS2
type: Gene
subclass of: SO_0000704
RO_0002162: 87175
gene: RBPMS2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1821250..1845880)
location: region:1821250-1845880:-1
so has part: feature:1821250-1845880:-1:exon
subclass of: SO_0000010

115907456
type: Gene
SIO_000068: ncbigene

position:1821250:-1
position: 1821250
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1845880:-1
position: 1845880
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1821250-1845880:-1:exon

RBPMS2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 87175
gene: RBPMS2
product: RNA binding protein, mRNA processing factor 2, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 1 EST, 13 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_030955389.1
SIO_010081: RBPMS2
subclass of: SO_0000673
so part of: RBPMS2
location: complement(join(1821250..1822420,1822698..1822767,1831115..1831263,1831855..1832005,1832824..1832886,1833376..1833414,1834037..1834114,1845586..1845880))
location: region:1821250-1845880:-1
so has part: feature:1845586-1845880:-1:exon
so has part: feature:1834037-1834114:-1:exon
so has part: feature:1833376-1833414:-1:exon
so has part: feature:1832824-1832886:-1:exon
so has part: feature:1831855-1832005:-1:exon
so has part: feature:1831115-1831263:-1:exon
so has part: feature:1822698-1822767:-1:exon
so has part: feature:1821250-1822420:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1845586-1845880:-1:exon

position:1845586:-1
position: 1845586
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1834037-1834114:-1:exon

position:1834037:-1
position: 1834037
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1834114:-1
position: 1834114
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1833376-1833414:-1:exon

position:1833376:-1
position: 1833376
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1833414:-1
position: 1833414
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1832824-1832886:-1:exon

position:1832824:-1
position: 1832824
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1832886:-1
position: 1832886
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1831855-1832005:-1:exon

position:1831855:-1
position: 1831855
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1832005:-1
position: 1832005
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1831115-1831263:-1:exon

position:1831115:-1
position: 1831115
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1831263:-1
position: 1831263
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1822698-1822767:-1:exon

position:1822698:-1
position: 1822698
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1822767:-1
position: 1822767
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1821250-1822420:-1:exon

position:1822420:-1
position: 1822420
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

RBPMS2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 87175
gene: RBPMS2
product: RNA binding protein, mRNA processing factor 2, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 1 EST, 13 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XM_030955388.1
SIO_010081: RBPMS2
subclass of: SO_0000673
so part of: RBPMS2
location: complement(join(1821250..1822463,1822698..1822767,1831115..1831263,1831855..1832005,1832824..1832886,1833376..1833414,1834037..1834114,1845586..1845880))
location: region:1821250-1845880:-1
so has part: feature:1845586-1845880:-1:exon
so has part: feature:1834037-1834114:-1:exon
so has part: feature:1833376-1833414:-1:exon
so has part: feature:1832824-1832886:-1:exon
so has part: feature:1831855-1832005:-1:exon
so has part: feature:1831115-1831263:-1:exon
so has part: feature:1822698-1822767:-1:exon
so has part: feature:1821250-1822463:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1845586-1845880:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1834037-1834114:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1833376-1833414:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1832824-1832886:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1831855-1832005:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1831115-1831263:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1822698-1822767:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1821250-1822463:-1:exon

position:1822463:-1
position: 1822463
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

RBPMS2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 87175
gene: RBPMS2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: RNA-binding protein with multiple splicing 2 isoform X1
translation: MSNLNKDTEHTNGGGTVEEEVRTLFVSGLPVDIKPRELYLLFRPFKGYEGSLIKLTSKQPVGFVTFDSRAGAEAAKNALNGIRFDPENPQTLRLEFAKANTKMAKSKLMATPNPTNIHPALGAHFIARDPYDLTGAALIPASPEAWAPYPLYTTELTPAIPHAAFTYPAAAAAAAALHAQMRWYPPSEATQQGWKSRQFC
SIO_010081: RBPMS2
subclass of: SO_0000673
so part of: RBPMS2
location: complement(join(1822705..1822767,1831115..1831263,1831855..1832005,1832824..1832886,1833376..1833414,1834037..1834114,1845586..1845645))
location: region:1822705-1845645:-1
so has part: feature:1845586-1845645:-1:exon
so has part: feature:1834037-1834114:-1:exon
so has part: feature:1833376-1833414:-1:exon
so has part: feature:1832824-1832886:-1:exon
so has part: feature:1831855-1832005:-1:exon
so has part: feature:1831115-1831263:-1:exon
so has part: feature:1822705-1822767:-1:exon

XP_030811248.1
type: Protein
SIO_000068: ncbiprotein

position:1822705:-1
position: 1822705
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1845645:-1
position: 1845645
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1845586-1845645:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1834037-1834114:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1833376-1833414:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1832824-1832886:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1831855-1832005:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1831115-1831263:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1822705-1822767:-1:exon

RBPMS2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 87175
gene: RBPMS2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: RNA-binding protein with multiple splicing 2 isoform X1
translation: MSNLNKDTEHTNGGGTVEEEVRTLFVSGLPVDIKPRELYLLFRPFKGYEGSLIKLTSKQPVGFVTFDSRAGAEAAKNALNGIRFDPENPQTLRLEFAKANTKMAKSKLMATPNPTNIHPALGAHFIARDPYDLTGAALIPASPEAWAPYPLYTTELTPAIPHAAFTYPAAAAAAAALHAQMRWYPPSEATQQGWKSRQFC
SIO_010081: RBPMS2
subclass of: SO_0000673
so part of: RBPMS2
location: complement(join(1822705..1822767,1831115..1831263,1831855..1832005,1832824..1832886,1833376..1833414,1834037..1834114,1845586..1845645))
location: region:1822705-1845645:-1
so has part: feature:1845586-1845645:-1:exon
so has part: feature:1834037-1834114:-1:exon
so has part: feature:1833376-1833414:-1:exon
so has part: feature:1832824-1832886:-1:exon
so has part: feature:1831855-1832005:-1:exon
so has part: feature:1831115-1831263:-1:exon
so has part: feature:1822705-1822767:-1:exon

XP_030811249.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1845586-1845645:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1834037-1834114:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1833376-1833414:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1832824-1832886:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1831855-1832005:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1831115-1831263:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1822705-1822767:-1:exon

RBPMS2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 87175
gene: RBPMS2
product: RNA binding protein, mRNA processing factor 2, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_030955390.1
SIO_010081: RBPMS2
subclass of: SO_0000673
so part of: RBPMS2
location: complement(join(1828444..1828480,1831115..1831263,1831855..1832005,1832824..1832886,1833376..1833414,1834037..1834114,1845586..1845880))
location: region:1828444-1845880:-1
so has part: feature:1845586-1845880:-1:exon
so has part: feature:1834037-1834114:-1:exon
so has part: feature:1833376-1833414:-1:exon
so has part: feature:1832824-1832886:-1:exon
so has part: feature:1831855-1832005:-1:exon
so has part: feature:1831115-1831263:-1:exon
so has part: feature:1828444-1828480:-1:exon

position:1828444:-1
position: 1828444
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1845586-1845880:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1834037-1834114:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1833376-1833414:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1832824-1832886:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1831855-1832005:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1831115-1831263:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1828444-1828480:-1:exon

position:1828480:-1
position: 1828480
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

RBPMS2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 87175
gene: RBPMS2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: RNA-binding protein with multiple splicing 2 isoform X2
translation: MSNLNKDTEHTNGGGTVEEEVRTLFVSGLPVDIKPRELYLLFRPFKGYEGSLIKLTSKQPVGFVTFDSRAGAEAAKNALNGIRFDPENPQTLRLEFAKANTKMAKSKLMATPNPTNIHPALGAHFIARDPYDLTGAALIPASPEAWAPYPLYTTELTPAIPHAAFTYPAAAAAAAALHAQ
SIO_010081: RBPMS2
subclass of: SO_0000673
so part of: RBPMS2
location: complement(join(1828478..1828480,1831115..1831263,1831855..1832005,1832824..1832886,1833376..1833414,1834037..1834114,1845586..1845645))
location: region:1828478-1845645:-1
so has part: feature:1845586-1845645:-1:exon
so has part: feature:1834037-1834114:-1:exon
so has part: feature:1833376-1833414:-1:exon
so has part: feature:1832824-1832886:-1:exon
so has part: feature:1831855-1832005:-1:exon
so has part: feature:1831115-1831263:-1:exon
so has part: feature:1828478-1828480:-1:exon

XP_030811250.1
type: Protein
SIO_000068: ncbiprotein

position:1828478:-1
position: 1828478
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1845586-1845645:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1834037-1834114:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1833376-1833414:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1832824-1832886:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1831855-1832005:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1831115-1831263:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1828478-1828480:-1:exon

OAZ2
type: Gene
subclass of: SO_0000704
RO_0002162: 87175
gene: OAZ2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1871166..1883803
location: region:1871166-1883803:1
so has part: feature:1871166-1883803:1:exon
subclass of: SO_0000010

115907567
type: Gene
SIO_000068: ncbigene

position:1871166:1
position: 1871166
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1883803:1
position: 1883803
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1871166-1883803:1:exon

OAZ2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 87175
gene: OAZ2
product: ornithine decarboxylase antizyme 2
exception: unclassified transcription discrepancy
note: The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: deleted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 ESTs, 21 Proteins, and 94% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
transcript id: XM_030955531.1
SIO_010081: OAZ2
subclass of: SO_0000673
so part of: OAZ2
location: join(1871166..1871334,1874540..1874697,1879294..1879469,1881269..1881354,1883046..1883803)
location: region:1871166-1883803:1
so has part: feature:1871166-1871334:1:exon
so has part: feature:1874540-1874697:1:exon
so has part: feature:1879294-1879469:1:exon
so has part: feature:1881269-1881354:1:exon
so has part: feature:1883046-1883803:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1871166-1871334:1:exon

position:1871334:1
position: 1871334
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1874540-1874697:1:exon

position:1874540:1
position: 1874540
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1874697:1
position: 1874697
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1879294-1879469:1:exon

position:1879294:1
position: 1879294
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1879469:1
position: 1879469
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1881269-1881354:1:exon

position:1881269:1
position: 1881269
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1881354:1
position: 1881354
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1883046-1883803:1:exon

position:1883046:1
position: 1883046
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

OAZ2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 87175
gene: OAZ2
exception: unclassified translation discrepancy
note: The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: deleted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: LOW QUALITY PROTEIN: ornithine decarboxylase antizyme 2
translation: MINTQDSSILPLSNCPQLQCCRHIVPGPLWCSDAPHPLSKIPGGRGGGRDPSLSALIYKDEKITVSQDVPVHEGKPHIVHFQYKVTEVKTSSWDAVLSNQSLFVEIPDGLLADGSKEGLSALLEFAEEKMKVNYVFICFRKSREDRAPLLKTFSFLGFEIVRPGHPAVPSRPDVMFMVYPLDQSSSSDEE
SIO_010081: OAZ2
subclass of: SO_0000673
so part of: OAZ2
location: join(1871315..1871334,1874540..1874697,1879294..1879469,1881269..1881354,1883046..1883179)
location: region:1871315-1883179:1
so has part: feature:1871315-1871334:1:exon
so has part: feature:1874540-1874697:1:exon
so has part: feature:1879294-1879469:1:exon
so has part: feature:1881269-1881354:1:exon
so has part: feature:1883046-1883179:1:exon

XP_030811391.1
type: Protein
SIO_000068: ncbiprotein

position:1871315:1
position: 1871315
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1883179:1
position: 1883179
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1871315-1871334:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1874540-1874697:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1879294-1879469:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1881269-1881354:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1883046-1883179:1:exon

ZNF609
type: Gene
subclass of: SO_0000704
RO_0002162: 87175
gene: ZNF609
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1886137..1947777)
location: region:1886137-1947777:-1
so has part: feature:1886137-1947777:-1:exon
subclass of: SO_0000010

115907280
type: Gene
SIO_000068: ncbigene

position:1886137:-1
position: 1886137
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1947777:-1
position: 1947777
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1886137-1947777:-1:exon

ZNF609
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 87175
gene: ZNF609
product: zinc finger protein 609, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 14 ESTs, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_030955070.1
SIO_010081: ZNF609
subclass of: SO_0000673
so part of: ZNF609
location: complement(join(1886137..1887491,1887648..1887717,1887830..1888046,1888513..1888688,1888848..1889214,1889639..1891994,1892422..1892509,1900057..1900282,1933209..1934070,1947668..1947777))
location: region:1886137-1947777:-1
so has part: feature:1947668-1947777:-1:exon
so has part: feature:1933209-1934070:-1:exon
so has part: feature:1900057-1900282:-1:exon
so has part: feature:1892422-1892509:-1:exon
so has part: feature:1889639-1891994:-1:exon
so has part: feature:1888848-1889214:-1:exon
so has part: feature:1888513-1888688:-1:exon
so has part: feature:1887830-1888046:-1:exon
so has part: feature:1887648-1887717:-1:exon
so has part: feature:1886137-1887491:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1947668-1947777:-1:exon

position:1947668:-1
position: 1947668
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1933209-1934070:-1:exon

position:1933209:-1
position: 1933209
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1934070:-1
position: 1934070
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1900057-1900282:-1:exon

position:1900057:-1
position: 1900057
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1900282:-1
position: 1900282
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1892422-1892509:-1:exon

position:1892422:-1
position: 1892422
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1892509:-1
position: 1892509
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1889639-1891994:-1:exon

position:1889639:-1
position: 1889639
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1891994:-1
position: 1891994
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1888848-1889214:-1:exon

position:1888848:-1
position: 1888848
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1889214:-1
position: 1889214
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1888513-1888688:-1:exon

position:1888513:-1
position: 1888513
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1888688:-1
position: 1888688
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1887830-1888046:-1:exon

position:1887830:-1
position: 1887830
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1888046:-1
position: 1888046
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:1887648-1887717:-1:exon

position:1887648:-1
position: 1887648
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1887717:-1
position: 1887717
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:1886137-1887491:-1:exon

position:1887491:-1
position: 1887491
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

ZNF609
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 87175
gene: ZNF609
product: zinc finger protein 609, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 14 ESTs, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_030955069.1
SIO_010081: ZNF609
subclass of: SO_0000673
so part of: ZNF609
location: complement(join(1886137..1887491,1887648..1887717,1887830..1888046,1888513..1888688,1888848..1889214,1889639..1891994,1892422..1892509,1900057..1900282,1933209..1934073,1947668..1947766))
location: region:1886137-1947766:-1
so has part: feature:1947668-1947766:-1:exon
so has part: feature:1933209-1934073:-1:exon
so has part: feature:1900057-1900282:-1:exon
so has part: feature:1892422-1892509:-1:exon
so has part: feature:1889639-1891994:-1:exon
so has part: feature:1888848-1889214:-1:exon
so has part: feature:1888513-1888688:-1:exon
so has part: feature:1887830-1888046:-1:exon
so has part: feature:1887648-1887717:-1:exon
so has part: feature:1886137-1887491:-1:exon

position:1947766:-1
position: 1947766
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1947668-1947766:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1933209-1934073:-1:exon

position:1934073:-1
position: 1934073
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1900057-1900282:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1892422-1892509:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1889639-1891994:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1888848-1889214:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1888513-1888688:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1887830-1888046:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1887648-1887717:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1886137-1887491:-1:exon

ZNF609
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 87175
gene: ZNF609
product: zinc finger protein 609, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 14 ESTs, 7 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
transcript id: XM_030955071.1
SIO_010081: ZNF609
subclass of: SO_0000673
so part of: ZNF609
location: complement(join(1886137..1887491,1887639..1887717,1887830..1888046,1888513..1888688,1888848..1889214,1889639..1891994,1892422..1892509,1900057..1900282,1933209..1934073,1947668..1947766))
location: region:1886137-1947766:-1
so has part: feature:1947668-1947766:-1:exon
so has part: feature:1933209-1934073:-1:exon
so has part: feature:1900057-1900282:-1:exon
so has part: feature:1892422-1892509:-1:exon
so has part: feature:1889639-1891994:-1:exon
so has part: feature:1888848-1889214:-1:exon
so has part: feature:1888513-1888688:-1:exon
so has part: feature:1887830-1888046:-1:exon
so has part: feature:1887639-1887717:-1:exon
so has part: feature:1886137-1887491:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1947668-1947766:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1933209-1934073:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1900057-1900282:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1892422-1892509:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1889639-1891994:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1888848-1889214:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1888513-1888688:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1887830-1888046:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1887639-1887717:-1:exon

position:1887639:-1
position: 1887639
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:1886137-1887491:-1:exon

ZNF609
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 87175
gene: ZNF609
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: zinc finger protein 609 isoform X1
translation: MSLSSGASGGKGIDANPVETYDSGDEWDIGVGNLIIDLDADLEKDQQKLEMSGSKEVGLPAPNAVATLPDNIKFVSPVPGPQGKEGKSKSKRSKTGKDSGKPTPGSSLFTPSEGAGGKKEVQGRSGDGANSGGLVPAVAPKSSEKSAKASRSVAGSKKEKEGSSSKSKKERSEGAGTAAEKEPSVLQPLALAVRVGQYDGGQGTEPAAAEQLGSIAIDTGAALNPLGVKSELEDGESECRQLKKVKSEKMESPVSTPAVLPLHLLVPVVNNDISSPCEQIMVRTRSVGVNTCDVALATEPECLGPCEPGTSVNLEGIVWQETEDGMLVVNVTWRNKTYVGTLLDCTQHDWAPPRFCDSPTSDLEMRNGRGRGKRMRPNSNTPVNETAAASDSKGTSNSSKTRAGASSKGRRGSQNSSDHRTPPGGTAEDVKASPSSVTKRKSKPLSDMDLNSSSEDSKGSKRIRTNSMGSATVPPATVKVEPAVLERNCPSPILIDCPHPNCNKKYKHINGLKYHQAHAHTDDDSKLEADVDSEYGEEPSLHADIGSCNGAAGTQKGSLSPARSATPKVRLMEPHSPSPSSKFSAKVPCKKKVGGEGDTDLGALSNDGSEDGPSVADETSNDDFDSLEKRCIDKDKSKKASGAKQEKIPSKSLKSARPIAPAIPPQPIYTFQTATLTTASPGSSAGLATTVVQTMPNSPQLKPIQPKPTVMGEPFAVNPALTPSKEKKKKDKKKKEPKEVENPLTPGKACRAEEGKSPFRGESSELGMKGEGLLNGSSDPHQSRLASIKAEADKIYSFTDNAPSPSIGGASRLENTNPAQPLTPLHVVTQNGAEASSVKTNSPAYSDISDAGEDGEGKLESVKAKDPEQLVKEGAKKALFPPQPQSKESPFYQGFETYYSPGYPQASPGPLNPGGQSAAETQTLKLKKDEEQENPEVKVKSEGCEEKKAELGSGSSQQPSVIQQRPNMYMQSLYYNQYAYVPPYGYSEQGYHAHLLSTNPAYRQQYEEQQKQRQSLEQQQQRGLEKKAELGLKEREAALKEEWKQKPPMPPTLTKAPSLTDLVKSGLSKPKEQGGPDMAKSVIIPKLEDSSKLSSSQVAEGLKVKLSEAGHLGKETAETKAGSECGRQAEVDPVLWYRQEAEPRMWTYVYPAKYSDIKTEDERWKEERDRKLKEERNRSKEASSKEDGKESTSSECKLTPTEEARMVGKDPRPSVHVPVSSPLTQHQSYIPYMHGYSYSQSYDPNHPSYRAMPTVMMQNYPGSYLPSSYSFSPYGSKASGSDDSDKSRASPSVSCKSSSESKALDILQQHASHYKSKSPTISEKTSQERERSGCGVVGGSGSCSSVGGAGAGERSGDRPRTSPSQRLLSTHHHHHHLGYSLLPAQYNLPYATGLSSTAIVASQQGSAPSLYPPPRRM
SIO_010081: ZNF609
subclass of: SO_0000673
so part of: ZNF609
location: complement(join(1887485..1887491,1887648..1887717,1887830..1888046,1888513..1888688,1888848..1889214,1889639..1891994,1892422..1892509,1900057..1900282,1933209..1933955))
location: region:1887485-1933955:-1
so has part: feature:1933209-1933955:-1:exon
so has part: feature:1900057-1900282:-1:exon
so has part: feature:1892422-1892509:-1:exon
so has part: feature:1889639-1891994:-1:exon
so has part: feature:1888848-1889214:-1:exon
so has part: feature:1888513-1888688:-1:exon
so has part: feature:1887830-1888046:-1:exon
so has part: feature:1887648-1887717:-1:exon
so has part: feature:1887485-1887491:-1:exon

XP_030810929.1
type: Protein
SIO_000068: ncbiprotein

position:1887485:-1
position: 1887485
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1933955:-1
position: 1933955
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1933209-1933955:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1900057-1900282:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1892422-1892509:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1889639-1891994:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1888848-1889214:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1888513-1888688:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1887830-1888046:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1887648-1887717:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1887485-1887491:-1:exon

ZNF609
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 87175
gene: ZNF609
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: zinc finger protein 609 isoform X1
translation: MSLSSGASGGKGIDANPVETYDSGDEWDIGVGNLIIDLDADLEKDQQKLEMSGSKEVGLPAPNAVATLPDNIKFVSPVPGPQGKEGKSKSKRSKTGKDSGKPTPGSSLFTPSEGAGGKKEVQGRSGDGANSGGLVPAVAPKSSEKSAKASRSVAGSKKEKEGSSSKSKKERSEGAGTAAEKEPSVLQPLALAVRVGQYDGGQGTEPAAAEQLGSIAIDTGAALNPLGVKSELEDGESECRQLKKVKSEKMESPVSTPAVLPLHLLVPVVNNDISSPCEQIMVRTRSVGVNTCDVALATEPECLGPCEPGTSVNLEGIVWQETEDGMLVVNVTWRNKTYVGTLLDCTQHDWAPPRFCDSPTSDLEMRNGRGRGKRMRPNSNTPVNETAAASDSKGTSNSSKTRAGASSKGRRGSQNSSDHRTPPGGTAEDVKASPSSVTKRKSKPLSDMDLNSSSEDSKGSKRIRTNSMGSATVPPATVKVEPAVLERNCPSPILIDCPHPNCNKKYKHINGLKYHQAHAHTDDDSKLEADVDSEYGEEPSLHADIGSCNGAAGTQKGSLSPARSATPKVRLMEPHSPSPSSKFSAKVPCKKKVGGEGDTDLGALSNDGSEDGPSVADETSNDDFDSLEKRCIDKDKSKKASGAKQEKIPSKSLKSARPIAPAIPPQPIYTFQTATLTTASPGSSAGLATTVVQTMPNSPQLKPIQPKPTVMGEPFAVNPALTPSKEKKKKDKKKKEPKEVENPLTPGKACRAEEGKSPFRGESSELGMKGEGLLNGSSDPHQSRLASIKAEADKIYSFTDNAPSPSIGGASRLENTNPAQPLTPLHVVTQNGAEASSVKTNSPAYSDISDAGEDGEGKLESVKAKDPEQLVKEGAKKALFPPQPQSKESPFYQGFETYYSPGYPQASPGPLNPGGQSAAETQTLKLKKDEEQENPEVKVKSEGCEEKKAELGSGSSQQPSVIQQRPNMYMQSLYYNQYAYVPPYGYSEQGYHAHLLSTNPAYRQQYEEQQKQRQSLEQQQQRGLEKKAELGLKEREAALKEEWKQKPPMPPTLTKAPSLTDLVKSGLSKPKEQGGPDMAKSVIIPKLEDSSKLSSSQVAEGLKVKLSEAGHLGKETAETKAGSECGRQAEVDPVLWYRQEAEPRMWTYVYPAKYSDIKTEDERWKEERDRKLKEERNRSKEASSKEDGKESTSSECKLTPTEEARMVGKDPRPSVHVPVSSPLTQHQSYIPYMHGYSYSQSYDPNHPSYRAMPTVMMQNYPGSYLPSSYSFSPYGSKASGSDDSDKSRASPSVSCKSSSESKALDILQQHASHYKSKSPTISEKTSQERERSGCGVVGGSGSCSSVGGAGAGERSGDRPRTSPSQRLLSTHHHHHHLGYSLLPAQYNLPYATGLSSTAIVASQQGSAPSLYPPPRRM
SIO_010081: ZNF609
subclass of: SO_0000673
so part of: ZNF609
location: complement(join(1887485..1887491,1887648..1887717,1887830..1888046,1888513..1888688,1888848..1889214,1889639..1891994,1892422..1892509,1900057..1900282,1933209..1933955))
location: region:1887485-1933955:-1
so has part: feature:1933209-1933955:-1:exon
so has part: feature:1900057-1900282:-1:exon
so has part: feature:1892422-1892509:-1:exon
so has part: feature:1889639-1891994:-1:exon
so has part: feature:1888848-1889214:-1:exon
so has part: feature:1888513-1888688:-1:exon
so has part: feature:1887830-1888046:-1:exon
so has part: feature:1887648-1887717:-1:exon
so has part: feature:1887485-1887491:-1:exon

XP_030810930.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1933209-1933955:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1900057-1900282:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1892422-1892509:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1889639-1891994:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1888848-1889214:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1888513-1888688:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1887830-1888046:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1887648-1887717:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1887485-1887491:-1:exon

ZNF609
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 87175
gene: ZNF609
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: zinc finger protein 609 isoform X2
translation: MSLSSGASGGKGIDANPVETYDSGDEWDIGVGNLIIDLDADLEKDQQKLEMSGSKEVGLPAPNAVATLPDNIKFVSPVPGPQGKEGKSKSKRSKTGKDSGKPTPGSSLFTPSEGAGGKKEVQGRSGDGANSGGLVPAVAPKSSEKSAKASRSVAGSKKEKEGSSSKSKKERSEGAGTAAEKEPSVLQPLALAVRVGQYDGGQGTEPAAAEQLGSIAIDTGAALNPLGVKSELEDGESECRQLKKVKSEKMESPVSTPAVLPLHLLVPVVNNDISSPCEQIMVRTRSVGVNTCDVALATEPECLGPCEPGTSVNLEGIVWQETEDGMLVVNVTWRNKTYVGTLLDCTQHDWAPPRFCDSPTSDLEMRNGRGRGKRMRPNSNTPVNETAAASDSKGTSNSSKTRAGASSKGRRGSQNSSDHRTPPGGTAEDVKASPSSVTKRKSKPLSDMDLNSSSEDSKGSKRIRTNSMGSATVPPATVKVEPAVLERNCPSPILIDCPHPNCNKKYKHINGLKYHQAHAHTDDDSKLEADVDSEYGEEPSLHADIGSCNGAAGTQKGSLSPARSATPKVRLMEPHSPSPSSKFSAKVPCKKKVGGEGDTDLGALSNDGSEDGPSVADETSNDDFDSLEKRCIDKDKSKKASGAKQEKIPSKSLKSARPIAPAIPPQPIYTFQTATLTTASPGSSAGLATTVVQTMPNSPQLKPIQPKPTVMGEPFAVNPALTPSKEKKKKDKKKKEPKEVENPLTPGKACRAEEGKSPFRGESSELGMKGEGLLNGSSDPHQSRLASIKAEADKIYSFTDNAPSPSIGGASRLENTNPAQPLTPLHVVTQNGAEASSVKTNSPAYSDISDAGEDGEGKLESVKAKDPEQLVKEGAKKALFPPQPQSKESPFYQGFETYYSPGYPQASPGPLNPGGQSAAETQTLKLKKDEEQENPEVKVKSEGCEEKKAELGSGSSQQPSVIQQRPNMYMQSLYYNQYAYVPPYGYSEQGYHAHLLSTNPAYRQQYEEQQKQRQSLEQQQQRGLEKKAELGLKEREAALKEEWKQKPPMPPTLTKAPSLTDLVKSGLSKPKEQGGPDMAKSVIIPKLEDSSKLSSSQVAEGLKVKLSEAGHLGKETAETKAGSECGRQAEVDPVLWYRQEAEPRMWTYVYPAKYSDIKTEDERWKEERDRKLKEERNRSKEASSKEDGKESTSSECKLTPTEEARMVGKDPRPSVHVPVSSPLTQHQSYIPYMHGYSYSQSYDPNHPSYRAMPTVMMQNYPGSYLPSSYSFSPYGSKASGSDDSDKSRASPSVSCKSSSESKALDILQQHASHYKSKSPTISEKTSQERERSGCGVVGGSGSCSSVGGAGAGERSGDRPRTSPSQRLLSTHHHHHHLGYSLLPAQYNLPYATGLSSTAIVASQQGSAPSLYPPPRR
SIO_010081: ZNF609
subclass of: SO_0000673
so part of: ZNF609
location: complement(join(1887644..1887717,1887830..1888046,1888513..1888688,1888848..1889214,1889639..1891994,1892422..1892509,1900057..1900282,1933209..1933955))
location: region:1887644-1933955:-1
so has part: feature:1933209-1933955:-1:exon
so has part: feature:1900057-1900282:-1:exon
so has part: feature:1892422-1892509:-1:exon
so has part: feature:1889639-1891994:-1:exon
so has part: feature:1888848-1889214:-1:exon
so has part: feature:1888513-1888688:-1:exon
so has part: feature:1887830-1888046:-1:exon
so has part: feature:1887644-1887717:-1:exon

XP_030810931.1
type: Protein
SIO_000068: ncbiprotein

position:1887644:-1
position: 1887644
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1933209-1933955:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1900057-1900282:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1892422-1892509:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1889639-1891994:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1888848-1889214:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1888513-1888688:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1887830-1888046:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1887644-1887717:-1:exon

TRIP4
type: Gene
subclass of: SO_0000704
RO_0002162: 87175
gene: TRIP4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1951103..1981722)
location: region:1951103-1981722:-1
so has part: feature:1951103-1981722:-1:exon
subclass of: SO_0000010

115907326
type: Gene
SIO_000068: ncbigene

position:1951103:-1
position: 1951103
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1981722:-1
position: 1981722
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1951103-1981722:-1:exon

TRIP4
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 87175
gene: TRIP4
product: thyroid hormone receptor interactor 4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 4 ESTs, 14 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XM_030955155.1
SIO_010081: TRIP4
subclass of: SO_0000673
so part of: TRIP4
location: complement(join(1951103..1951345,1955147..1955249,1969189..1969280,1969586..1969710,1970674..1970861,1971519..1971645,1971967..1972182,1973234..1973363,1975303..1975381,1976587..1976820,1979126..1979262,1980769..1980935,1981273..1981722))
location: region:1951103-1981722:-1
so has part: feature:1981273-1981722:-1:exon
so has part: feature:1980769-1980935:-1:exon
so has part: feature:1979126-1979262:-1:exon
so has part: feature:1976587-1976820:-1:exon
so has part: feature:1975303-1975381:-1:exon
so has part: feature:1973234-1973363:-1:exon
so has part: feature:1971967-1972182:-1:exon
so has part: feature:1971519-1971645:-1:exon
so has part: feature:1970674-1970861:-1:exon
so has part: feature:1969586-1969710:-1:exon
so has part: feature:1969189-1969280:-1:exon
so has part: feature:1955147-1955249:-1:exon
so has part: feature:1951103-1951345:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1981273-1981722:-1:exon

position:1981273:-1
position: 1981273
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1980769-1980935:-1:exon

position:1980769:-1
position: 1980769
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1980935:-1
position: 1980935
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1979126-1979262:-1:exon

position:1979126:-1
position: 1979126
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1979262:-1
position: 1979262
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1976587-1976820:-1:exon

position:1976587:-1
position: 1976587
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1976820:-1
position: 1976820
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1975303-1975381:-1:exon

position:1975303:-1
position: 1975303
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1975381:-1
position: 1975381
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1973234-1973363:-1:exon

position:1973234:-1
position: 1973234
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1973363:-1
position: 1973363
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1971967-1972182:-1:exon

position:1971967:-1
position: 1971967
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1972182:-1
position: 1972182
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1971519-1971645:-1:exon

position:1971519:-1
position: 1971519
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1971645:-1
position: 1971645
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:1970674-1970861:-1:exon

position:1970674:-1
position: 1970674
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1970861:-1
position: 1970861
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:1969586-1969710:-1:exon

position:1969586:-1
position: 1969586
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1969710:-1
position: 1969710
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:1969189-1969280:-1:exon

position:1969189:-1
position: 1969189
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1969280:-1
position: 1969280
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:1955147-1955249:-1:exon

position:1955147:-1
position: 1955147
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1955249:-1
position: 1955249
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:1951103-1951345:-1:exon

position:1951345:-1
position: 1951345
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

TRIP4
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 87175
gene: TRIP4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: activating signal cointegrator 1
translation: MNWPRNWRSAAAFPGGREKEGEGAGRCGGVSRPPRKMAAPSALLAWCVQHLRGDFGLDVGEDVVRYILSITNEEEIREYVVDLVQGTDGKKNWFVEELLSRWRKSAELPSEPFPAYRKKDEALEVLRAGDQGKKGKRKGRNRQETPAHPEPSAHGEEVKTPLDLAKAQESSSGVSSSSTSCKKKPKYVSLYTREGQDRLAVLIPGRHACECLGQKHKLINNCLECGRIVCEQEGSGPCLFCGALVCTKEEQDILQRDSNKSQKLLKKLMAGAESSGNLDAISKGLLPQQEARLKSGLEMAVKHKDKLLEFDRTSVRRTQVIDDESDYFATDSNQWLSKQEREALQKREQELRELRHASRLAKKITIDFAGRQILEEDNNMAEYHSKLDETIAAMSCGALSEPARSPGAEMTPNSGVLVNPRLLQPAPLWVDQTGLLPQRKTVHSMEAGSECGSERSRLRIQDRELQEISDDGWCLSLHQPWASLLVRGIKRVEGRTWYTSHRGRLWIAATAKRPSPQEISELEATYRMLHRKDVEFPSDYPSGCLLGCVDVTDCLSQEQFQEQYPDLSQESGSPFVFICTNPQEMVLKFPIKGKHKIWKLDAKIHQGAKKGLMKQKAVG
SIO_010081: TRIP4
subclass of: SO_0000673
so part of: TRIP4
location: complement(join(1951278..1951345,1955147..1955249,1969189..1969280,1969586..1969710,1970674..1970861,1971519..1971645,1971967..1972182,1973234..1973363,1975303..1975381,1976587..1976820,1979126..1979262,1980769..1980935,1981273..1981466))
location: region:1951278-1981466:-1
so has part: feature:1981273-1981466:-1:exon
so has part: feature:1980769-1980935:-1:exon
so has part: feature:1979126-1979262:-1:exon
so has part: feature:1976587-1976820:-1:exon
so has part: feature:1975303-1975381:-1:exon
so has part: feature:1973234-1973363:-1:exon
so has part: feature:1971967-1972182:-1:exon
so has part: feature:1971519-1971645:-1:exon
so has part: feature:1970674-1970861:-1:exon
so has part: feature:1969586-1969710:-1:exon
so has part: feature:1969189-1969280:-1:exon
so has part: feature:1955147-1955249:-1:exon
so has part: feature:1951278-1951345:-1:exon

XP_030811015.1
type: Protein
SIO_000068: ncbiprotein

position:1951278:-1
position: 1951278
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1981466:-1
position: 1981466
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1981273-1981466:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1980769-1980935:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1979126-1979262:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1976587-1976820:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1975303-1975381:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1973234-1973363:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1971967-1972182:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1971519-1971645:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1970674-1970861:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1969586-1969710:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1969189-1969280:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1955147-1955249:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1951278-1951345:-1:exon

PCLAF
type: Gene
subclass of: SO_0000704
RO_0002162: 87175
gene: PCLAF
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1981809..1985300
location: region:1981809-1985300:1
so has part: feature:1981809-1985300:1:exon
subclass of: SO_0000010

115907644
type: Gene
SIO_000068: ncbigene

position:1981809:1
position: 1981809
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1985300:1
position: 1985300
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1981809-1985300:1:exon

PCLAF
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 87175
gene: PCLAF
product: PCNA clamp associated factor
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
transcript id: XM_030955639.1
SIO_010081: PCLAF
subclass of: SO_0000673
so part of: PCLAF
location: join(1981809..1981876,1982467..1982559,1983410..1983551,1984888..1985300)
location: region:1981809-1985300:1
so has part: feature:1981809-1981876:1:exon
so has part: feature:1982467-1982559:1:exon
so has part: feature:1983410-1983551:1:exon
so has part: feature:1984888-1985300:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1981809-1981876:1:exon

position:1981876:1
position: 1981876
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1982467-1982559:1:exon

position:1982467:1
position: 1982467
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1982559:1
position: 1982559
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1983410-1983551:1:exon

position:1983410:1
position: 1983410
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1983551:1
position: 1983551
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1984888-1985300:1:exon

position:1984888:1
position: 1984888
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

PCLAF
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 87175
gene: PCLAF
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: PCNA-associated factor
translation: MARTKADQRGRAFRKVLVARAPRKALGSGSGSSSSVSAGPALPGRRGVRRPVGLNRVCVRPVPAWQRGISDFLQLPSKESRASDGDTPGTSGLEARPLPLDPAEEGECLEEE
SIO_010081: PCLAF
subclass of: SO_0000673
so part of: PCLAF
location: join(1981831..1981876,1982467..1982559,1983410..1983551,1984888..1984945)
location: region:1981831-1984945:1
so has part: feature:1981831-1981876:1:exon
so has part: feature:1982467-1982559:1:exon
so has part: feature:1983410-1983551:1:exon
so has part: feature:1984888-1984945:1:exon

XP_030811499.1
type: Protein
SIO_000068: ncbiprotein

position:1981831:1
position: 1981831
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1984945:1
position: 1984945
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1981831-1981876:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1982467-1982559:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1983410-1983551:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1984888-1984945:1:exon

CSNK1G1
type: Gene
subclass of: SO_0000704
RO_0002162: 87175
gene: CSNK1G1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 2001019..2089654
location: region:2001019-2089654:1
so has part: feature:2001019-2089654:1:exon
subclass of: SO_0000010

115907249
type: Gene
SIO_000068: ncbigene

position:2001019:1
position: 2001019
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2089654:1
position: 2089654
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2001019-2089654:1:exon

CSNK1G1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 87175
gene: CSNK1G1
product: casein kinase 1 gamma 1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 mRNAs, 19 ESTs, 23 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_030955000.1
SIO_010081: CSNK1G1
subclass of: SO_0000673
so part of: CSNK1G1
location: join(2001019..2001037,2012221..2012325,2034248..2034660,2041197..2041237,2045454..2045523,2062491..2062642,2068203..2068437,2070745..2070830,2072830..2072914,2074534..2074682,2076699..2076803,2080868..2080975,2083631..2083737,2088897..2089654)
location: region:2001019-2089654:1
so has part: feature:2001019-2001037:1:exon
so has part: feature:2012221-2012325:1:exon
so has part: feature:2034248-2034660:1:exon
so has part: feature:2041197-2041237:1:exon
so has part: feature:2045454-2045523:1:exon
so has part: feature:2062491-2062642:1:exon
so has part: feature:2068203-2068437:1:exon
so has part: feature:2070745-2070830:1:exon
so has part: feature:2072830-2072914:1:exon
so has part: feature:2074534-2074682:1:exon
so has part: feature:2076699-2076803:1:exon
so has part: feature:2080868-2080975:1:exon
so has part: feature:2083631-2083737:1:exon
so has part: feature:2088897-2089654:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2001019-2001037:1:exon

position:2001037:1
position: 2001037
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2012221-2012325:1:exon

position:2012221:1
position: 2012221
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2012325:1
position: 2012325
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2034248-2034660:1:exon

position:2034248:1
position: 2034248
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2034660:1
position: 2034660
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:2041197-2041237:1:exon

position:2041197:1
position: 2041197
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2041237:1
position: 2041237
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:2045454-2045523:1:exon

position:2045454:1
position: 2045454
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2045523:1
position: 2045523
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:2062491-2062642:1:exon

position:2062491:1
position: 2062491
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2062642:1
position: 2062642
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:2068203-2068437:1:exon

position:2068203:1
position: 2068203
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2068437:1
position: 2068437
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:2070745-2070830:1:exon

position:2070745:1
position: 2070745
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2070830:1
position: 2070830
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:2072830-2072914:1:exon

position:2072830:1
position: 2072830
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2072914:1
position: 2072914
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:2074534-2074682:1:exon

position:2074534:1
position: 2074534
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2074682:1
position: 2074682
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:2076699-2076803:1:exon

position:2076699:1
position: 2076699
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2076803:1
position: 2076803
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:2080868-2080975:1:exon

position:2080868:1
position: 2080868
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2080975:1
position: 2080975
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:2083631-2083737:1:exon

position:2083631:1
position: 2083631
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2083737:1
position: 2083737
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:2088897-2089654:1:exon

position:2088897:1
position: 2088897
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

CSNK1G1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 87175
gene: CSNK1G1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: casein kinase I
translation: MDHPSRDKDERQRTTKGMPGRSGHGSRPSSSASSGVLMVGPNFRVGKKIGCGNFGELRLGKNLYTNEYVAIKLEPIKSRAPQLHLEYRFYKQLGSAAEGLPQVYYFGPCGKYNAMVLELLGPSLEDLFDLCDRTFTLKTVLMIAIQLISRMEYVHSKNLIYRDVKPENFLIGRQGNKKEHVIHIIDFGLAKEYIDPETKKHIPYREHKSLTGTARYMSINTHLGKEQSRRDDLEALGHMFMYFLRGSLPWQGLKADTLKERYQKIGDTKRNTPVEVLCENFPEEMATYLRYVRRLDFFERPDYDYLRTIFTELFEKKGYTFDYAYDWVGRPIPTPVGSVHVDSGTSAVTRDSHIHRDRPSQQALRNQVSSDRRGEWEIQPSRQTNTSYLTSHLAADRHGGSVQVVSSTNGELNVDDPTGAHSNAPITAQAEVEVVEEAKCCCFFKRKRKKTAQRHK
SIO_010081: CSNK1G1
subclass of: SO_0000673
so part of: CSNK1G1
location: join(2034483..2034660,2041197..2041237,2045454..2045523,2062491..2062642,2068203..2068437,2070745..2070830,2072830..2072914,2074534..2074682,2076699..2076803,2080868..2080975,2083631..2083737,2088897..2088951)
location: region:2034483-2088951:1
so has part: feature:2034483-2034660:1:exon
so has part: feature:2041197-2041237:1:exon
so has part: feature:2045454-2045523:1:exon
so has part: feature:2062491-2062642:1:exon
so has part: feature:2068203-2068437:1:exon
so has part: feature:2070745-2070830:1:exon
so has part: feature:2072830-2072914:1:exon
so has part: feature:2074534-2074682:1:exon
so has part: feature:2076699-2076803:1:exon
so has part: feature:2080868-2080975:1:exon
so has part: feature:2083631-2083737:1:exon
so has part: feature:2088897-2088951:1:exon

XP_030810860.1
type: Protein
SIO_000068: ncbiprotein

position:2034483:1
position: 2034483
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2088951:1
position: 2088951
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2034483-2034660:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2041197-2041237:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2045454-2045523:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2062491-2062642:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2068203-2068437:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2070745-2070830:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2072830-2072914:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2074534-2074682:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2076699-2076803:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2080868-2080975:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:2083631-2083737:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:2088897-2088951:1:exon

PPIB
type: Gene
subclass of: SO_0000704
RO_0002162: 87175
gene: PPIB
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 2093391..2095414
location: region:2093391-2095414:1
so has part: feature:2093391-2095414:1:exon
subclass of: SO_0000010

115907250
type: Gene
SIO_000068: ncbigene

position:2093391:1
position: 2093391
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2095414:1
position: 2095414
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2093391-2095414:1:exon

PPIB
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 87175
gene: PPIB
product: peptidylprolyl isomerase B
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 mRNAs, 76 ESTs, 46 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
transcript id: XM_030955001.1
SIO_010081: PPIB
subclass of: SO_0000673
so part of: PPIB
location: join(2093391..2093635,2094088..2094201,2094336..2094429,2094801..2094985,2095085..2095414)
location: region:2093391-2095414:1
so has part: feature:2093391-2093635:1:exon
so has part: feature:2094088-2094201:1:exon
so has part: feature:2094336-2094429:1:exon
so has part: feature:2094801-2094985:1:exon
so has part: feature:2095085-2095414:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2093391-2093635:1:exon

position:2093635:1
position: 2093635
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2094088-2094201:1:exon

position:2094088:1
position: 2094088
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2094201:1
position: 2094201
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2094336-2094429:1:exon

position:2094336:1
position: 2094336
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2094429:1
position: 2094429
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:2094801-2094985:1:exon

position:2094801:1
position: 2094801
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2094985:1
position: 2094985
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:2095085-2095414:1:exon

position:2095085:1
position: 2095085
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

PPIB
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 87175
gene: PPIB
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: peptidyl-prolyl cis-trans isomerase B
translation: MPAARRALWPGCERRRMKVLVAAAALGAALLLLLPAASRADERKKGPKVTAKVFFDLRIGEEDAGRVVIGLFGKTVPKTVENFMALATGEKGFGFKGSKFHRVIKDFMIQGGDFTRGDGTGGKSIYGDRFPDENFKLKHYGPGWVSMANAGKDTNGSQFFITTVKTPWLDGKHVVFGKVLEGMDVVRKVESTKTDSRDKPLKDVTIVDCGTIEVEKPFAIAKE
SIO_010081: PPIB
subclass of: SO_0000673
so part of: PPIB
location: join(2093480..2093635,2094088..2094201,2094336..2094429,2094801..2094985,2095085..2095207)
location: region:2093480-2095207:1
so has part: feature:2093480-2093635:1:exon
so has part: feature:2094088-2094201:1:exon
so has part: feature:2094336-2094429:1:exon
so has part: feature:2094801-2094985:1:exon
so has part: feature:2095085-2095207:1:exon

XP_030810861.1
type: Protein
SIO_000068: ncbiprotein

position:2093480:1
position: 2093480
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2095207:1
position: 2095207
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2093480-2093635:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2094088-2094201:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2094336-2094429:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2094801-2094985:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2095085-2095207:1:exon

SNX22
type: Gene
subclass of: SO_0000704
RO_0002162: 87175
gene: SNX22
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(2095600..2099787)
location: region:2095600-2099787:-1
so has part: feature:2095600-2099787:-1:exon
subclass of: SO_0000010

115907251
type: Gene
SIO_000068: ncbigene

position:2095600:-1
position: 2095600
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2099787:-1
position: 2099787
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2095600-2099787:-1:exon

SNX22
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 87175
gene: SNX22
product: sorting nexin 22, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_030955002.1
SIO_010081: SNX22
subclass of: SO_0000673
so part of: SNX22
location: complement(join(2095600..2095959,2096089..2096165,2096336..2096389,2096495..2096599,2096687..2096770,2099687..2099787))
location: region:2095600-2099787:-1
so has part: feature:2099687-2099787:-1:exon
so has part: feature:2096687-2096770:-1:exon
so has part: feature:2096495-2096599:-1:exon
so has part: feature:2096336-2096389:-1:exon
so has part: feature:2096089-2096165:-1:exon
so has part: feature:2095600-2095959:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2099687-2099787:-1:exon

position:2099687:-1
position: 2099687
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2096687-2096770:-1:exon

position:2096687:-1
position: 2096687
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2096770:-1
position: 2096770
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2096495-2096599:-1:exon

position:2096495:-1
position: 2096495
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2096599:-1
position: 2096599
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:2096336-2096389:-1:exon

position:2096336:-1
position: 2096336
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2096389:-1
position: 2096389
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:2096089-2096165:-1:exon

position:2096089:-1
position: 2096089
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2096165:-1
position: 2096165
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:2095600-2095959:-1:exon

position:2095959:-1
position: 2095959
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

SNX22
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 87175
gene: SNX22
product: sorting nexin 22, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 8 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_030955003.1
SIO_010081: SNX22
subclass of: SO_0000673
so part of: SNX22
location: complement(join(2095795..2095959,2096089..2096165,2096295..2096389,2096495..2096599,2096687..2096770,2099687..2099787))
location: region:2095795-2099787:-1
so has part: feature:2099687-2099787:-1:exon
so has part: feature:2096687-2096770:-1:exon
so has part: feature:2096495-2096599:-1:exon
so has part: feature:2096295-2096389:-1:exon
so has part: feature:2096089-2096165:-1:exon
so has part: feature:2095795-2095959:-1:exon

position:2095795:-1
position: 2095795
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2099687-2099787:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2096687-2096770:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2096495-2096599:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2096295-2096389:-1:exon

position:2096295:-1
position: 2096295
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:2096089-2096165:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2095795-2095959:-1:exon

SNX22
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 87175
gene: SNX22
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: sorting nexin-22 isoform X1
translation: MIAVSIPAAEPSAAAARGPERAHTVFRVEVLCNGRRHTVTKRYSEFQALHKRIKKSCKVPDFPPRHVPNWMPKALEQRRQALELYLQGVLYHNEELPQDILDFLKQHQTPAPPAPHCRLLLGSLRAATRPRAAPQRRPQRGPAGPLPPPEPCPGLAAPPASGMRSSTQHPGMQWREKGSLW
SIO_010081: SNX22
subclass of: SO_0000673
so part of: SNX22
location: complement(join(2095806..2095959,2096089..2096165,2096336..2096389,2096495..2096599,2096687..2096770,2099687..2099758))
location: region:2095806-2099758:-1
so has part: feature:2099687-2099758:-1:exon
so has part: feature:2096687-2096770:-1:exon
so has part: feature:2096495-2096599:-1:exon
so has part: feature:2096336-2096389:-1:exon
so has part: feature:2096089-2096165:-1:exon
so has part: feature:2095806-2095959:-1:exon

XP_030810862.1
type: Protein
SIO_000068: ncbiprotein

position:2095806:-1
position: 2095806
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2099758:-1
position: 2099758
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2099687-2099758:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2096687-2096770:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2096495-2096599:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2096336-2096389:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2096089-2096165:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2095806-2095959:-1:exon

SNX22
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 87175
gene: SNX22
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: sorting nexin-22 isoform X2
translation: MIAVSIPAAEPSAAAARGPERAHTVFRVEVLCNGRRHTVTKRYSEFQALHKRIKKSCKVPDFPPRHVPNWMPKALEQRRQALELYLQGVLYHNEELPQDILDFLKVRWCQQSPKGSSPPSTRLLPPQRPIVGFCSDPYVRPHGPELLPNAVLSGVLQGLYLPLSRVPAWQHPQPLE
SIO_010081: SNX22
subclass of: SO_0000673
so part of: SNX22
location: complement(join(2095862..2095959,2096089..2096165,2096295..2096389,2096495..2096599,2096687..2096770,2099687..2099758))
location: region:2095862-2099758:-1
so has part: feature:2099687-2099758:-1:exon
so has part: feature:2096687-2096770:-1:exon
so has part: feature:2096495-2096599:-1:exon
so has part: feature:2096295-2096389:-1:exon
so has part: feature:2096089-2096165:-1:exon
so has part: feature:2095862-2095959:-1:exon

XP_030810863.1
type: Protein
SIO_000068: ncbiprotein

position:2095862:-1
position: 2095862
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2099687-2099758:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2096687-2096770:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2096495-2096599:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2096295-2096389:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2096089-2096165:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2095862-2095959:-1:exon

SNX1
type: Gene
subclass of: SO_0000704
RO_0002162: 87175
gene: SNX1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(2100301..2112489)
location: region:2100301-2112489:-1
so has part: feature:2100301-2112489:-1:exon
subclass of: SO_0000010

115907587
type: Gene
SIO_000068: ncbigene

position:2100301:-1
position: 2100301
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2112489:-1
position: 2112489
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2100301-2112489:-1:exon

SNX1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 87175
gene: SNX1
product: sorting nexin 1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 16 ESTs, 24 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
transcript id: XM_030955559.1
SIO_010081: SNX1
subclass of: SO_0000673
so part of: SNX1
location: complement(join(2100301..2100711,2100837..2100908,2101192..2101272,2101610..2101753,2102326..2102531,2103405..2103498,2103626..2103739,2104783..2104858,2105106..2105184,2105677..2105818,2106719..2106762,2107810..2107876,2108417..2108550,2109379..2109481,2112339..2112489))
location: region:2100301-2112489:-1
so has part: feature:2112339-2112489:-1:exon
so has part: feature:2109379-2109481:-1:exon
so has part: feature:2108417-2108550:-1:exon
so has part: feature:2107810-2107876:-1:exon
so has part: feature:2106719-2106762:-1:exon
so has part: feature:2105677-2105818:-1:exon
so has part: feature:2105106-2105184:-1:exon
so has part: feature:2104783-2104858:-1:exon
so has part: feature:2103626-2103739:-1:exon
so has part: feature:2103405-2103498:-1:exon
so has part: feature:2102326-2102531:-1:exon
so has part: feature:2101610-2101753:-1:exon
so has part: feature:2101192-2101272:-1:exon
so has part: feature:2100837-2100908:-1:exon
so has part: feature:2100301-2100711:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2112339-2112489:-1:exon

position:2112339:-1
position: 2112339
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2109379-2109481:-1:exon

position:2109379:-1
position: 2109379
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2109481:-1
position: 2109481
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2108417-2108550:-1:exon

position:2108417:-1
position: 2108417
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2108550:-1
position: 2108550
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:2107810-2107876:-1:exon

position:2107810:-1
position: 2107810
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2107876:-1
position: 2107876
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:2106719-2106762:-1:exon

position:2106719:-1
position: 2106719
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2106762:-1
position: 2106762
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:2105677-2105818:-1:exon

position:2105677:-1
position: 2105677
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2105818:-1
position: 2105818
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:2105106-2105184:-1:exon

position:2105106:-1
position: 2105106
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2105184:-1
position: 2105184
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:2104783-2104858:-1:exon

position:2104783:-1
position: 2104783
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2104858:-1
position: 2104858
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:2103626-2103739:-1:exon

position:2103626:-1
position: 2103626
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2103739:-1
position: 2103739
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:2103405-2103498:-1:exon

position:2103405:-1
position: 2103405
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2103498:-1
position: 2103498
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:2102326-2102531:-1:exon

position:2102326:-1
position: 2102326
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2102531:-1
position: 2102531
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:2101610-2101753:-1:exon

position:2101610:-1
position: 2101610
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2101753:-1
position: 2101753
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:2101192-2101272:-1:exon

position:2101192:-1
position: 2101192
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2101272:-1
position: 2101272
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:2100837-2100908:-1:exon

position:2100837:-1
position: 2100837
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2100908:-1
position: 2100908
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:2100301-2100711:-1:exon

position:2100711:-1
position: 2100711
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

SNX1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 87175
gene: SNX1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: sorting nexin-1
translation: MASGGSRGSRSPSPAERRPPPFPEHRGLGAPDSDSEGEDIFTGSSNSPALKEEPPLPVSSSSKENGVHVEQDDQDLFADATVELSLDNTQNNQKKEVAKPCSPLPSLDVAASSSRNLSKSYEELEEEEQEDKFDLTVGVSDPEKVGDGMNAYVAYKVSTQTSMPMFRSKQFSVKRRFSDFLGLYEKLSEKHAQNGFIVPPPPEKSLIGMTKVKVGKEDSSSAEFLEKRRAALERYLRRVVSHPTMLQDPDVREFLEKEELPRAVGTQTLSGAGIMKMFNKATDAVSKMTIKMNESDMWFEEKLQEVECEDQRLRKLHAVVETLVNHRKELALNTAQFAKSLAMLGSSEDNTALSRALSQLAEVEEKIEQLHHEQANNDFFLLAELLGDYIRLLSVVKGAFDQRMRTWQRWQDAQTMLQKKREMEARLLWANKPDKLQQAKDEISEWESRVTQYERDFERISAVIRKEVIRFEKEKSKDFRNHVTKYLETLLNSQQQLVKYWEAFLPEAKAIS
SIO_010081: SNX1
subclass of: SO_0000673
so part of: SNX1
location: complement(join(2100661..2100711,2100837..2100908,2101192..2101272,2101610..2101753,2102326..2102531,2103405..2103498,2103626..2103739,2104783..2104858,2105106..2105184,2105677..2105818,2106719..2106762,2107810..2107876,2108417..2108550,2109379..2109481,2112339..2112470))
location: region:2100661-2112470:-1
so has part: feature:2112339-2112470:-1:exon
so has part: feature:2109379-2109481:-1:exon
so has part: feature:2108417-2108550:-1:exon
so has part: feature:2107810-2107876:-1:exon
so has part: feature:2106719-2106762:-1:exon
so has part: feature:2105677-2105818:-1:exon
so has part: feature:2105106-2105184:-1:exon
so has part: feature:2104783-2104858:-1:exon
so has part: feature:2103626-2103739:-1:exon
so has part: feature:2103405-2103498:-1:exon
so has part: feature:2102326-2102531:-1:exon
so has part: feature:2101610-2101753:-1:exon
so has part: feature:2101192-2101272:-1:exon
so has part: feature:2100837-2100908:-1:exon
so has part: feature:2100661-2100711:-1:exon

XP_030811419.1
type: Protein
SIO_000068: ncbiprotein

position:2100661:-1
position: 2100661
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2112470:-1
position: 2112470
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2112339-2112470:-1:exon